BLASTP 2.2.6 [Apr-09-2003]

RID: 1063614100-9552-1651160.BLASTQ3

Query= Ec_MADS gi|19074594|ref|NP_586100_1| MADS domain
[Encephalitozoon cuniculi]
         (776 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,523,846 sequences; 490,609,399 total letters

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|19074594|ref|NP_586100.1|  MADS domain [Encephalitozoon c...  1436   0.0  
gi|23612809|ref|NP_704348.1|  2-oxoglutarate dehydrogenase e...    38   0.79 

Alignments

>gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cuniculi]
 gi|19069236|emb|CAD25704.1| MADS domain [Encephalitozoon cuniculi]
          Length = 776

 Score = 1436 bits (3717), Expect = 0.0
 Identities = 760/776 (97%), Positives = 760/776 (97%)

Query: 1   MLSQEERKQMILKLFVALKESNIFPGYTPVQIKEAAIRAEQRIYEESGSKEEYLRGMDER 60
           MLSQEERKQMILKLFVALKESNIFPGYTPVQIKEAAIRAEQRIYEESGSKEEYLRGMDER
Sbjct: 1   MLSQEERKQMILKLFVALKESNIFPGYTPVQIKEAAIRAEQRIYEESGSKEEYLRGMDER 60

Query: 61  FQRIERVVSNRSRADGRGKSTQEQMGSYEHARPQFQGFRNGSEEPQDSTKQGYHYGNPRL 120
           FQRIERVVSNRSRADGRGKSTQEQMGSYEHARPQFQGFRNGSEEPQDSTKQGYHYGNPRL
Sbjct: 61  FQRIERVVSNRSRADGRGKSTQEQMGSYEHARPQFQGFRNGSEEPQDSTKQGYHYGNPRL 120

Query: 121 ERGERRLSEQLFTENKQVFGMEDGFSPSKIMGMNRKHNLEEMGDIPRFNSRSAEGNTRGR 180
           ERGERRLSEQLFTENKQVFGMEDGFSPSKIMGMNRKHNLEEMGDIPRFNSRSAEGNTRGR
Sbjct: 121 ERGERRLSEQLFTENKQVFGMEDGFSPSKIMGMNRKHNLEEMGDIPRFNSRSAEGNTRGR 180

Query: 181 SNSCNIQNSLHESVSHTMNRESFADNSRNPMPFRRFQSEVNSYGAVNGKDFRNATDQRHF 240
           SNSCNIQNSLHESVSHTMNRESFADNSRNPMPFRRFQSEVNSYGAVNGKDFRNATDQRHF
Sbjct: 181 SNSCNIQNSLHESVSHTMNRESFADNSRNPMPFRRFQSEVNSYGAVNGKDFRNATDQRHF 240

Query: 241 YMQREERPKEXXXXXXXXXXXXXXXXCFDYSRGNGNRVPRGENPLKSPADMNFIEMQRDK 300
           YMQREERPKE                CFDYSRGNGNRVPRGENPLKSPADMNFIEMQRDK
Sbjct: 241 YMQREERPKEAAYGYGGGQAFGPGFGCFDYSRGNGNRVPRGENPLKSPADMNFIEMQRDK 300

Query: 301 ASGAGAFNGQGFIPLQHPRQFSLDPVPSYSNSGSMNVFPFSNKTVYGARGPFISPNDGRP 360
           ASGAGAFNGQGFIPLQHPRQFSLDPVPSYSNSGSMNVFPFSNKTVYGARGPFISPNDGRP
Sbjct: 301 ASGAGAFNGQGFIPLQHPRQFSLDPVPSYSNSGSMNVFPFSNKTVYGARGPFISPNDGRP 360

Query: 361 GHIYPPRMPNVQNFPMPSSSDAIGSFSPNPHDPVTNMFSMGPQSKAGAGGAWMGDPPSFD 420
           GHIYPPRMPNVQNFPMPSSSDAIGSFSPNPHDPVTNMFSMGPQSKAGAGGAWMGDPPSFD
Sbjct: 361 GHIYPPRMPNVQNFPMPSSSDAIGSFSPNPHDPVTNMFSMGPQSKAGAGGAWMGDPPSFD 420

Query: 421 RHYPNPGQGAMKSSPLFFNQQLQHQPYFHHPRNSGQQNSMVDRKKPLSAPENPSRWMFNH 480
           RHYPNPGQGAMKSSPLFFNQQLQHQPYFHHPRNSGQQNSMVDRKKPLSAPENPSRWMFNH
Sbjct: 421 RHYPNPGQGAMKSSPLFFNQQLQHQPYFHHPRNSGQQNSMVDRKKPLSAPENPSRWMFNH 480

Query: 481 SGEDFRVPYDELPHRYESTKKSMGSFDSSKKDERNFSTNSNEYKGCINTSSWHSGGFRSF 540
           SGEDFRVPYDELPHRYESTKKSMGSFDSSKKDERNFSTNSNEYKGCINTSSWHSGGFRSF
Sbjct: 481 SGEDFRVPYDELPHRYESTKKSMGSFDSSKKDERNFSTNSNEYKGCINTSSWHSGGFRSF 540

Query: 541 FPESNPPDSIDSQKRIDSSLWFRDKFRYGRAPEAEDPMNTIEGNHDVYKKEKSPDHHRSD 600
           FPESNPPDSIDSQKRIDSSLWFRDKFRYGRAPEAEDPMNTIEGNHDVYKKEKSPDHHRSD
Sbjct: 541 FPESNPPDSIDSQKRIDSSLWFRDKFRYGRAPEAEDPMNTIEGNHDVYKKEKSPDHHRSD 600

Query: 601 FVAQQQTGLRETSQNECGVSNPETFLNFPSEVNAFLKDHEMEKIYLCNQELLDLKTRLKE 660
           FVAQQQTGLRETSQNECGVSNPETFLNFPSEVNAFLKDHEMEKIYLCNQELLDLKTRLKE
Sbjct: 601 FVAQQQTGLRETSQNECGVSNPETFLNFPSEVNAFLKDHEMEKIYLCNQELLDLKTRLKE 660

Query: 661 GISVINKSLRIYNAFKDAFPSSELLQKYETIKNLLEKQEEYIKYGAYFLKARSIDSFIDQ 720
           GISVINKSLRIYNAFKDAFPSSELLQKYETIKNLLEKQEEYIKYGAYFLKARSIDSFIDQ
Sbjct: 661 GISVINKSLRIYNAFKDAFPSSELLQKYETIKNLLEKQEEYIKYGAYFLKARSIDSFIDQ 720

Query: 721 IKSLTVDMSYDLKLNTMDASDINYGECLMNAVKAFAERKKKEDTFSLNVIGKNTYE 776
           IKSLTVDMSYDLKLNTMDASDINYGECLMNAVKAFAERKKKEDTFSLNVIGKNTYE
Sbjct: 721 IKSLTVDMSYDLKLNTMDASDINYGECLMNAVKAFAERKKKEDTFSLNVIGKNTYE 776



>gi|23612809|ref|NP_704348.1| 2-oxoglutarate dehydrogenase e1 component, mitochondrial precursor,
           putative [Plasmodium falciparum 3D7]
 gi|23499087|emb|CAD51167.1| 2-oxoglutarate dehydrogenase e1 component, mitochondrial precursor,
           putative [Plasmodium falciparum 3D7]
          Length = 1038

 Score = 37.7 bits (86), Expect = 0.79
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 13/112 (11%)

Query: 619 VSNPETFLNFPSEVNAFLKD-HEMEKIYLCN----QELLDLKTRLKEGISVINKSLRIYN 673
           ++N E     P EV   LKD  E+++I LC+     +LL+ +   K     I +  ++  
Sbjct: 871 LTNTEFLPYLPEEVGHKLKDKKEIKRIILCSGQVYYDLLNYRYTNKIDDVAIARIEQL-- 928

Query: 674 AFKDAFPSSEL---LQKYETIKNLLEKQEEYIKYGAYFLKARSIDSFIDQIK 722
                FP  ++   LQ Y  +++++  QEE++  G +F  +R I++ I Q+K
Sbjct: 929 ---SPFPFKQIMNDLQTYPNLRDIIWAQEEHMNMGPWFYVSRRIEASIKQLK 977





  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Sep 14, 2003  6:30 PM
  Number of letters in database: 490,609,399
  Number of sequences in database:  1,523,846
  
Lambda     K      H
   0.314    0.132    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,583,982
Number of Sequences: 1523846
Number of extensions: 3709958
Number of successful extensions: 6961
Number of sequences better than  1.0: 3
Number of HSP's better than  1.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6959
Number of HSP's gapped (non-prelim): 6
length of query: 776
length of database: 490,609,399
effective HSP length: 132
effective length of query: 644
effective length of database: 289,461,727
effective search space: 186413352188
effective search space used: 186413352188
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 86 (37.7 bits)