RID: 1063991691-3185-1977469.BLASTQ3 Query= NP_173030 (117 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,524,159 sequences; 490,690,828 total letters Results of PSI-Blast iteration 9
Query= NP_173030 (117 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,524,159 sequences; 490,690,828 total letters
Legend: - means that the alignment score was below the threshold on the previous iteration - means that the alignment was checked on the previous iteration Hit list size Sequences with E-value BETTER than threshold Related Structures Score E Sequences producing significant alignments: (bits) Value gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhab... 144 3e-34 gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhab... 143 4e-34 gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhab... 143 5e-34 gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thal... 140 5e-33 gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabd... 140 6e-33 gi|17554044|ref|NP_499201.1| CREB-binding protein like family me... 139 8e-33 gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p... 132 9e-31 gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] ... 129 7e-30 gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] 129 7e-30 gi|631119|pir||S39162 transcription coactivator CREB-binding pro... 129 8e-30 gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p... 129 1e-29 gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 128 2e-29 gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-termi... 128 3e-29 gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia califor... 127 4e-29 gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [... 127 4e-29 gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein >gi|481698|p... 126 6e-29 gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] >... 126 7e-29 gi|737920|prf||1923401A protein CBP 126 7e-29 gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-bindin... 125 1e-28 gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p... 125 2e-28 gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana >... 125 2e-28 gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubi... 124 2e-28 gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] 123 5e-28 gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambi... 118 2e-26 gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly ... 112 9e-25 gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 111 2e-24 gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melan... 111 2e-24 gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica ... 111 3e-24 gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thal... 110 4e-24 gi|17552402|ref|NP_497144.1| CREB-binding protein like family me... 105 1e-22 gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Bin... 105 2e-22 gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japon... 104 3e-22 gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [... 101 3e-21 gi|17552400|ref|NP_497145.1| CREB-binding protein like family me... 98 2e-20 gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabid... 94 5e-19 gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thal... 93 7e-19 gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related ... 93 9e-19 gi|17508323|ref|NP_493339.1| CREB-binding protein like family me... 92 1e-18 gi|28279616|gb|AAH45472.1| Similar to PC2 (positive cofactor 2, ... 87 7e-17 gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arab... 86 1e-16 gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic... 86 1e-16 gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabdi... 86 1e-16 gi|7493813|pir||T18235 transcription activator GAL11 homolog - y... 85 3e-16 gi|25518480|pir||D86302 hypothetical protein F17F16.9 - Arabidop... 79 1e-14 gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] 78 3e-14 gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonic... 77 4e-14 gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cunicu... 73 7e-13 gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis t... 73 1e-12 gi|32451779|gb|AAH54779.1| Pcqap protein [Mus musculus] 72 2e-12 gi|21748618|dbj|BAC03446.1| FLJ00386 protein [Homo sapiens] 72 2e-12 gi|21312134|ref|NP_056973.2| positive cofactor 2, glutamine/Q-ri... 71 3e-12 gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine-rich-associat... 71 3e-12 gi|27734440|sp|Q96RN5|PCAP_HUMAN Positive cofactor 2 glutamine/Q... 71 4e-12 gi|18394390|ref|NP_564004.1| expressed protein [Arabidopsis thal... 68 2e-11 gi|20177999|sp|Q924H2|PCAP_MOUSE Positive cofactor 2 glutamine/Q... 67 7e-11 gi|15809028|ref|NP_291087.1| positive cofactor 2, glutamine/Q-ri... 65 2e-10 gi|28374176|gb|AAH46263.1| Similar to PC2 (positive cofactor 2, ... 60 8e-09 gi|21956190|gb|AAM83255.1|AF378334_1 ARC105 [Xenopus laevis] 52 2e-06 gi|20891927|ref|XP_147188.1| positive cofactor 2, multiprotein c... 51 4e-06 gi|3037135|gb|AAC12944.1| TPA inducible protein [Homo sapiens] 47 6e-05 gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonic... 46 1e-04 Sequences with E-value WORSE than threshold gi|19920468|ref|NP_608528.1| CG4184-PA [Drosophila melanogaster]... 40 0.008 gi|15230072|ref|NP_189057.1| expressed protein [Arabidopsis thal... 38 0.022 gi|7506661|pir||T16726 hypothetical protein R12B2.5 - Caenorhabd... 38 0.031 gi|9632980|ref|NP_050006.1| multifunctional protein [Sugarcane y... 37 0.048 gi|30267511|gb|AAP21786.1| multifunctional protein [Sugarcane ye... 37 0.052 gi|23470798|ref|ZP_00126130.1| hypothetical protein [Pseudomonas... 37 0.054 gi|28871928|ref|NP_794547.1| lipoprotein, putative [Pseudomonas ... 37 0.058 gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thal... 36 0.11 gi|34499307|ref|NP_903522.1| hypothetical protein CV3852 [Chromo... 36 0.16 gi|15610187|ref|NP_217566.1| hypothetical protein Rv3050c [Mycob... 35 0.22 gi|6324522|ref|NP_014591.1| Regulates transcription of a diverse... 35 0.25 gi|171550|gb|AAA34622.1| auxiliary activator 35 0.25 gi|19704464|ref|NP_604026.1| Chromosome partition protein smc [F... 34 0.50 gi|25148756|ref|NP_741152.1| putative protein (3G918) [Caenorhab... 34 0.57 gi|25148761|ref|NP_741151.1| putative protein (3G918) [Caenorhab... 34 0.62 gi|984193|emb|CAA62537.1| transcriptional activator [Saccharomyc... 33 0.72 Alignments
Legend:
- means that the alignment score was below the threshold on the previous iteration
- means that the alignment was checked on the previous iteration
gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhab... 144 3e-34 gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhab... 143 4e-34 gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhab... 143 5e-34 gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thal... 140 5e-33 gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabd... 140 6e-33 gi|17554044|ref|NP_499201.1| CREB-binding protein like family me... 139 8e-33 gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p... 132 9e-31 gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] ... 129 7e-30 gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] 129 7e-30 gi|631119|pir||S39162 transcription coactivator CREB-binding pro... 129 8e-30 gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p... 129 1e-29 gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 128 2e-29 gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-termi... 128 3e-29 gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia califor... 127 4e-29 gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [... 127 4e-29 gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein >gi|481698|p... 126 6e-29 gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] >... 126 7e-29 gi|737920|prf||1923401A protein CBP 126 7e-29 gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-bindin... 125 1e-28 gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p... 125 2e-28 gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana >... 125 2e-28 gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubi... 124 2e-28 gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] 123 5e-28 gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambi... 118 2e-26 gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly ... 112 9e-25 gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 111 2e-24 gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melan... 111 2e-24 gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica ... 111 3e-24 gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thal... 110 4e-24 gi|17552402|ref|NP_497144.1| CREB-binding protein like family me... 105 1e-22 gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Bin... 105 2e-22 gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japon... 104 3e-22 gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [... 101 3e-21 gi|17552400|ref|NP_497145.1| CREB-binding protein like family me... 98 2e-20 gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabid... 94 5e-19 gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thal... 93 7e-19 gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related ... 93 9e-19 gi|17508323|ref|NP_493339.1| CREB-binding protein like family me... 92 1e-18 gi|28279616|gb|AAH45472.1| Similar to PC2 (positive cofactor 2, ... 87 7e-17 gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arab... 86 1e-16 gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic... 86 1e-16 gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabdi... 86 1e-16 gi|7493813|pir||T18235 transcription activator GAL11 homolog - y... 85 3e-16 gi|25518480|pir||D86302 hypothetical protein F17F16.9 - Arabidop... 79 1e-14 gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] 78 3e-14 gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonic... 77 4e-14 gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cunicu... 73 7e-13 gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis t... 73 1e-12 gi|32451779|gb|AAH54779.1| Pcqap protein [Mus musculus] 72 2e-12 gi|21748618|dbj|BAC03446.1| FLJ00386 protein [Homo sapiens] 72 2e-12 gi|21312134|ref|NP_056973.2| positive cofactor 2, glutamine/Q-ri... 71 3e-12 gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine-rich-associat... 71 3e-12 gi|27734440|sp|Q96RN5|PCAP_HUMAN Positive cofactor 2 glutamine/Q... 71 4e-12 gi|18394390|ref|NP_564004.1| expressed protein [Arabidopsis thal... 68 2e-11 gi|20177999|sp|Q924H2|PCAP_MOUSE Positive cofactor 2 glutamine/Q... 67 7e-11 gi|15809028|ref|NP_291087.1| positive cofactor 2, glutamine/Q-ri... 65 2e-10 gi|28374176|gb|AAH46263.1| Similar to PC2 (positive cofactor 2, ... 60 8e-09 gi|21956190|gb|AAM83255.1|AF378334_1 ARC105 [Xenopus laevis] 52 2e-06 gi|20891927|ref|XP_147188.1| positive cofactor 2, multiprotein c... 51 4e-06 gi|3037135|gb|AAC12944.1| TPA inducible protein [Homo sapiens] 47 6e-05 gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonic... 46 1e-04
gi|19920468|ref|NP_608528.1| CG4184-PA [Drosophila melanogaster]... 40 0.008 gi|15230072|ref|NP_189057.1| expressed protein [Arabidopsis thal... 38 0.022 gi|7506661|pir||T16726 hypothetical protein R12B2.5 - Caenorhabd... 38 0.031 gi|9632980|ref|NP_050006.1| multifunctional protein [Sugarcane y... 37 0.048 gi|30267511|gb|AAP21786.1| multifunctional protein [Sugarcane ye... 37 0.052 gi|23470798|ref|ZP_00126130.1| hypothetical protein [Pseudomonas... 37 0.054 gi|28871928|ref|NP_794547.1| lipoprotein, putative [Pseudomonas ... 37 0.058 gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thal... 36 0.11 gi|34499307|ref|NP_903522.1| hypothetical protein CV3852 [Chromo... 36 0.16 gi|15610187|ref|NP_217566.1| hypothetical protein Rv3050c [Mycob... 35 0.22 gi|6324522|ref|NP_014591.1| Regulates transcription of a diverse... 35 0.25 gi|171550|gb|AAA34622.1| auxiliary activator 35 0.25 gi|19704464|ref|NP_604026.1| Chromosome partition protein smc [F... 34 0.50 gi|25148756|ref|NP_741152.1| putative protein (3G918) [Caenorhab... 34 0.57 gi|25148761|ref|NP_741151.1| putative protein (3G918) [Caenorhab... 34 0.62 gi|984193|emb|CAA62537.1| transcriptional activator [Saccharomyc... 33 0.72
>gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhabditis elegans Length = 2027 Score = 144 bits (364), Expect = 3e-34 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 8/120 (6%) Query: 4 NNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIA 61 N P+LP + T +W Q+ D R +V K+++ + + +L A Sbjct: 580 NGEIPNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYA 639 Query: 62 ARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS------AAIPAANNGTSIDSI 115 + E+++F A ++ +Y ++ K+ ++ + Q S A A ++ + Sbjct: 640 RKVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQ 699
>gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhabditis elegans] gi|14530537|emb|CAA82353.2| C. elegans CBP-1 protein (corresponding sequence R10E11.1a) [Caenorhabditis elegans] Length = 2045 Score = 143 bits (363), Expect = 4e-34 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 8/120 (6%) Query: 4 NNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIA 61 N P+LP + T +W Q+ D R +V K+++ + + +L A Sbjct: 569 NGEIPNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYA 628 Query: 62 ARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS------AAIPAANNGTSIDSI 115 + E+++F A ++ +Y ++ K+ ++ + Q S A A ++ + Sbjct: 629 RKVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQ 688
>gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhabditis elegans] gi|20455476|sp|P34545|CBP1_CAEEL Protein cbp-1 gi|25299632|pir||G88564 protein R10E11.1 [imported] - Caenorhabditis elegans gi|17645979|emb|CAD18875.1| C. elegans CBP-1 protein (corresponding sequence R10E11.1b) [Caenorhabditis elegans] Length = 2056 Score = 143 bits (362), Expect = 5e-34 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 8/120 (6%) Query: 4 NNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIA 61 N P+LP + T +W Q+ D R +V K+++ + + +L A Sbjct: 580 NGEIPNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYA 639 Query: 62 ARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS------AAIPAANNGTSIDSI 115 + E+++F A ++ +Y ++ K+ ++ + Q S A A ++ + Sbjct: 640 RKVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQ 699
>gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thaliana] Length = 1335 Score = 140 bits (353), Expect = 5e-33 Identities = 117/117 (100%), Positives = 117/117 (100%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT Sbjct: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117
>gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabditis elegans (fragment) Length = 316 Score = 140 bits (353), Expect = 6e-33 Identities = 22/110 (20%), Positives = 47/110 (42%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAA 62 N +LP + T +W Q+ D R IV K+++ + + +L A Sbjct: 144 TNGNISNLPPPNVPVRTKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYAR 203 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 + E+++F A+++ +Y ++ K+ ++ + Q S AA + Sbjct: 204 KVEKEVFETAIDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDE 253
>gi|17554044|ref|NP_499201.1| CREB-binding protein like family member (36.7 kD) (3L15) [Caenorhabditis elegans] gi|25395947|pir||D88569 protein K03H1.10 [imported] - Caenorhabditis elegans gi|3877003|emb|CAA82940.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans] gi|3878179|emb|CAA82665.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans] Length = 322 Score = 139 bits (352), Expect = 8e-33 Identities = 22/110 (20%), Positives = 47/110 (42%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAA 62 N +LP + T +W Q+ D R IV K+++ + + +L A Sbjct: 150 TNGNISNLPPPNVPVRTKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYAR 209 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 + E+++F A+++ +Y ++ K+ ++ + Q S AA + Sbjct: 210 KVEKEVFETAIDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDE 259
>gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p300 [Rattus norvegicus] Length = 1605 Score = 132 bits (334), Expect = 9e-31 Identities = 17/126 (13%), Positives = 43/126 (34%), Gaps = 12/126 (9%) Query: 1 MDNNNWR------PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPE 52 M+ N P+ W + D R +V+K+++ + Sbjct: 173 MNENASVASLGPLPTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDR 232 Query: 53 GINELRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPAANN 108 + L A + E ++ A N+ +Y ++ K+ ++ + + + +P+A Sbjct: 233 RMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPSAPG 292 Query: 109 GTSIDS 114 + Sbjct: 293 MVPVPM 298
>gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] gi|3023440|sp|Q92793|CBP_HUMAN CREB-binding protein gi|2443859|gb|AAC51770.1| CREB-binding protein Length = 2442 Score = 129 bits (326), Expect = 7e-30 Identities = 15/122 (12%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRI 60 + P+ W + D R +V+K+++ + + L Sbjct: 573 TLSTIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAY 632 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSID 113 A + E ++ A ++ +Y ++ K+ ++ + + S PA + Sbjct: 633 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQP 692 Query: 114 SI 115 + Sbjct: 693 PV 694
>gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] Length = 2442 Score = 129 bits (326), Expect = 7e-30 Identities = 15/122 (12%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRI 60 + P+ W + D R +V+K+++ + + L Sbjct: 573 TLSTIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAY 632 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSID 113 A + E ++ A ++ +Y ++ K+ ++ + + S PA + Sbjct: 633 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQP 692 Query: 114 SI 115 + Sbjct: 693 PV 694
>gi|631119|pir||S39162 transcription coactivator CREB-binding protein - human Length = 2440 Score = 129 bits (326), Expect = 8e-30 Identities = 15/122 (12%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRI 60 + P+ W + D R +V+K+++ + + L Sbjct: 573 TLSTIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAY 632 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSID 113 A + E ++ A ++ +Y ++ K+ ++ + + S PA + Sbjct: 633 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQP 692 Query: 114 SI 115 + Sbjct: 693 PV 694
>gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p300 [Rattus norvegicus] Length = 2156 Score = 129 bits (325), Expect = 1e-29 Identities = 17/126 (13%), Positives = 43/126 (34%), Gaps = 12/126 (9%) Query: 1 MDNNNWR------PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPE 52 M+ N P+ W + D R +V+K+++ + Sbjct: 173 MNENASVASLGPLPTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDR 232 Query: 53 GINELRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPAANN 108 + L A + E ++ A N+ +Y ++ K+ ++ + + + +P+A Sbjct: 233 RMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPSAPG 292 Query: 109 GTSIDS 114 + Sbjct: 293 MVPVPM 298
>gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] Length = 1405 Score = 128 bits (323), Expect = 2e-29 Identities = 72/116 (62%), Positives = 91/116 (78%), Gaps = 1/116 (0%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MD NNWRP+ P GE +DTGDWRTQL PDSRQ+IVNKIM+TLK+HLPFSG +G+NEL++I Sbjct: 16 MDTNNWRPTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKI 75 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIP 116 A RFEEKI++ A +Q+DYLRKIS+KML+ME+KSQNA +S ++ P Sbjct: 76 AGRFEEKIYTAASSQSDYLRKISLKMLSMESKSQNAMPNSL-QSNNPGSSNRPPDP 130
>gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-terminal} [mice, Peptide Partial, 688 aa] Length = 688 Score = 128 bits (322), Expect = 3e-29 Identities = 15/113 (13%), Positives = 39/113 (34%), Gaps = 6/113 (5%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIAARFE 65 P+ W + D R +V+K+++ + + L A + E Sbjct: 558 PTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVE 617 Query: 66 EKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPAANNGTSIDS 114 ++ A N+ +Y ++ K+ ++ + + + +P A + Sbjct: 618 GDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAPGMGPVPM 670
>gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia californica] Length = 2245 Score = 127 bits (320), Expect = 4e-29 Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 2/113 (1%) Query: 5 NWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIAA 62 P + P DW Q+ D R +V+K+++ + + L A Sbjct: 488 GNAPDIVKSIPVSSRKDWHAQVTQDLRNHLVHKLVQAIFPTPDQATLRDSRMKNLVAYAR 547 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSI 115 + E ++ A N+ Y ++ K+ ++ + + + A N Sbjct: 548 KVEGDMYESANNRGQYYHLLAEKIYKIQKELEEKRIQRMKVQNAPNAQVPGMQ 600
>gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [Homo sapiens] Length = 1553 Score = 127 bits (319), Expect = 4e-29 Identities = 18/128 (14%), Positives = 42/128 (32%), Gaps = 12/128 (9%) Query: 1 MDNNNW------RPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPE 52 M N P+ W + D R +V+K+++ + Sbjct: 544 MSENASVPSLGPMPTAAQPSTTGIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDR 603 Query: 53 GINELRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPAANN 108 + L A + E ++ A N+ +Y ++ K+ ++ + + + +P A Sbjct: 604 RMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAAG 663 Query: 109 GTSIDSIP 116 + P Sbjct: 664 MVPVSMNP 671
>gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein gi|481698|pir||S39161 CREB-binding protein - mouse gi|435855|gb|AAB28651.1| CREB-binding protein; CBP [Mus sp.] Length = 2441 Score = 126 bits (318), Expect = 6e-29 Identities = 14/120 (11%), Positives = 40/120 (33%), Gaps = 9/120 (7%) Query: 5 NWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIAA 62 + P+ W + D R +V+K+++ + + L A Sbjct: 574 STIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAK 633 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSIDSI 115 + E ++ A ++ +Y ++ K+ ++ + + + PA + + Sbjct: 634 KVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRTRLHKQGILGNQPALPASGAQPPV 693
>gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] gi|19547887|gb|AAL87532.1| CREB-binding protein [Mus musculus] Length = 2429 Score = 126 bits (318), Expect = 7e-29 Identities = 15/120 (12%), Positives = 40/120 (33%), Gaps = 9/120 (7%) Query: 5 NWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIAA 62 + P+ W + D R +V+K+++ + + L A Sbjct: 568 STIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAK 627 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSIDSI 115 + E ++ A ++ +Y ++ K+ ++ + + S PA + + Sbjct: 628 KVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPASGAQPPV 687
>gi|737920|prf||1923401A protein CBP Length = 2441 Score = 126 bits (317), Expect = 7e-29 Identities = 14/120 (11%), Positives = 41/120 (34%), Gaps = 9/120 (7%) Query: 5 NWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIAA 62 + P+ W ++ D R +V+K+++ + + L A Sbjct: 574 STIPTAAPPSSTGVRKGWHERVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAK 633 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSIDSI 115 + E ++ A ++ +Y ++ K+ ++ + + + PA + + Sbjct: 634 KVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRTRLHKQGILGNQPALPASGAQPPV 693
>gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens] gi|3024341|sp|Q09472|P300_HUMAN E1A-associated protein p300 gi|627657|pir||A54277 transcription adaptor protein p300 - human gi|495301|gb|AAA18639.1| p300 protein Length = 2414 Score = 125 bits (316), Expect = 1e-28 Identities = 18/128 (14%), Positives = 42/128 (32%), Gaps = 12/128 (9%) Query: 1 MDNNNW------RPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPE 52 M N P+ W + D R +V+K+++ + Sbjct: 544 MSENASVPSLGPMPTAAQPSTTGIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDR 603 Query: 53 GINELRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPAANN 108 + L A + E ++ A N+ +Y ++ K+ ++ + + + +P A Sbjct: 604 RMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAAG 663 Query: 109 GTSIDSIP 116 + P Sbjct: 664 MVPVSMNP 671
>gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p300 [Mus musculus] gi|29244384|ref|NP_808489.1| hypothetical protein A730011L11 [Mus musculus] gi|26335221|dbj|BAC31311.1| unnamed protein product [Mus musculus] Length = 714 Score = 125 bits (314), Expect = 2e-28 Identities = 15/113 (13%), Positives = 39/113 (34%), Gaps = 6/113 (5%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIAARFE 65 P+ W + D R +V+K+++ + + L A + E Sbjct: 558 PTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVE 617 Query: 66 EKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPAANNGTSIDS 114 ++ A N+ +Y ++ K+ ++ + + + +P A + Sbjct: 618 GDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAPGMGPVPM 670
>gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana gi|8927657|gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene. [Arabidopsis thaliana] Length = 1366 Score = 125 bits (314), Expect = 2e-28 Identities = 117/148 (79%), Positives = 117/148 (79%), Gaps = 31/148 (20%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 Query: 61 AARFEEKIFSGALNQ-------------------------------TDYLRKISMKMLTM 89 AARFEEKIFSGALNQ TDYLRKISMKMLTM Sbjct: 61 AARFEEKIFSGALNQRFVRQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTM 120 Query: 90 ETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ETKSQNAAGSSAAIPAANNGTSIDSIPT Sbjct: 121 ETKSQNAAGSSAAIPAANNGTSIDSIPT 148
>gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubinstein-Taybi syndrome) [Xenopus laevis] Length = 1047 Score = 124 bits (313), Expect = 2e-28 Identities = 16/121 (13%), Positives = 42/121 (34%), Gaps = 6/121 (4%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRI 60 N+ P+ W + D R +V+K+++ + + L Sbjct: 562 NHGTMPTAAPPSSTGVRKAWHEHVTQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAY 621 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIP---AANNGTSID-SIP 116 A + E ++ A ++ +Y ++ K+ ++ + + S ++ + P Sbjct: 622 ARKVEGDMYESANSRDEYYHFLAEKIYKIQKELEEKRRSRLQKQGIMSSQAPLQAPGAQP 681 Query: 117 T 117 T Sbjct: 682 T 682
>gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] Length = 555 Score = 123 bits (310), Expect = 5e-28 Identities = 15/122 (12%), Positives = 40/122 (32%), Gaps = 9/122 (7%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRI 60 + P+ W + D R +V+K+++ + + L Sbjct: 307 TLSTIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAY 366 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSID 113 A + E ++ A ++ +Y ++ K+ ++ + + S PA + Sbjct: 367 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQP 426 Query: 114 SI 115 + Sbjct: 427 PV 428
>gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambiae] gi|30178093|gb|EAA06516.2| ENSANGP00000004748 [Anopheles gambiae str. PEST] Length = 2572 Score = 118 bits (296), Expect = 2e-26 Identities = 17/102 (16%), Positives = 41/102 (40%), Gaps = 3/102 (2%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKH--LPFSGPEGINELRRI 60 PS+ P T DW + PD R +V+K+++ + + + L Sbjct: 727 TGGTNPSMV-AVPVQGTKDWHHSVTPDLRNHLVHKLVQAIFPSPDPSAMFDKRMYNLVAY 785 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAA 102 A + E ++ A ++++Y ++ K+ ++ + + Sbjct: 786 AKKVEGDMYEMANSRSEYYHLLAEKIYKIQKELEEKRQKRKE 827
>gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly (Drosophila melanogaster) gi|1916930|gb|AAB53050.1| CREB-binding protein homolog [Drosophila melanogaster] Length = 3190 Score = 112 bits (282), Expect = 9e-25 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Query: 13 GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKH--LPFSGPEGINELRRIAARFEEKIFS 70 G P + DWR + D R +V+K+++ + + ++ L A + E+ ++ Sbjct: 934 GPPGDNEKDWRESVTADLRNHLVHKLVQAIFPTSDPTTMQDKRMHNLVSYAEKVEKDMYE 993 Query: 71 GALNQTDYLRKISMKMLTMETKSQNAAGSSAA 102 A ++++Y ++ K+ ++ + + Sbjct: 994 MAKSRSEYYHLLAEKIYKIQKELEEKRLKRKE 1025
>gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] Length = 3148 Score = 111 bits (280), Expect = 2e-24 Identities = 62/93 (66%), Positives = 77/93 (82%) Query: 9 SLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKI 68 S G +D DWR L DSRQ+IVNKIM+TLK+HLPFSGPEG+NEL+RIA RFEEKI Sbjct: 4 SRQKGVAMLDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKI 63 Query: 69 FSGALNQTDYLRKISMKMLTMETKSQNAAGSSA 101 F+ A +Q+DYLRKIS+KML+ME++SQNA+GS+ Sbjct: 64 FTSATSQSDYLRKISLKMLSMESRSQNASGSNE 96
>gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melanogaster] gi|22833041|gb|AAF46516.2| CG15319-PB [Drosophila melanogaster] Length = 3276 Score = 111 bits (279), Expect = 2e-24 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Query: 13 GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKH--LPFSGPEGINELRRIAARFEEKIFS 70 G P + DWR + D R +V+K+++ + + ++ L A + E+ ++ Sbjct: 934 GPPGDNEKDWRESVTADLRNHLVHKLVQAIFPTSDPTTMQDKRMHNLVSYAEKVEKDMYE 993 Query: 71 GALNQTDYLRKISMKMLTMETKSQNAAGSSAA 102 A ++++Y ++ K+ ++ + + Sbjct: 994 MAKSRSEYYHLLAEKIYKIQKELEEKRLKRKE 1025
>gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-group)] Length = 1359 Score = 111 bits (278), Expect = 3e-24 Identities = 64/121 (52%), Positives = 83/121 (68%), Gaps = 12/121 (9%) Query: 4 NNWRPSL-----------PN-GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGP 51 NWRP+ PN PA+ GDWR+QL ++R +IVNKIM+TLKKHLP S P Sbjct: 7 GNWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVP 66 Query: 52 EGINELRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTS 111 EG+NEL++IA RFEEKI++ A +Q+DYLRKIS+KML+METK+Q G++ I N S Sbjct: 67 EGLNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQNPGNAQVIQNQNPPGS 126 Query: 112 I 112 Sbjct: 127 E 127
>gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thaliana] gi|25513497|pir||C86292 F7H2.13 protein - Arabidopsis thaliana gi|8927658|gb|AAF82149.1|AC034256_13 ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene. [Arabidopsis thaliana] gi|12083256|gb|AAG48787.1|AF332424_1 unknown protein [Arabidopsis thaliana] Length = 179 Score = 110 bits (276), Expect = 4e-24 Identities = 64/101 (63%), Positives = 72/101 (71%) Query: 16 AMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQ 75 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQ Sbjct: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 Query: 76 TDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIP 116 T+YLR+I MKML METKSQNAAGSS+A S+P Sbjct: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVP 101
Score = 82.7 bits (204), Expect = 1e-15 Identities = 53/82 (64%), Positives = 65/82 (79%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEK 67 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL RIA EE Sbjct: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEEL 157 Query: 68 IFSGALNQTDYLRKISMKMLTM 89 IF+ A+NQ DYL KIS+KM TM Sbjct: 158 IFNSAINQEDYLGKISLKMRTM 179
>gi|17552402|ref|NP_497144.1| CREB-binding protein like family member (3A733) [Caenorhabditis elegans] gi|7496697|pir||T33579 hypothetical protein C29F9.6 - Caenorhabditis elegans gi|3790688|gb|AAC68748.1| Hypothetical protein C29F9.6 [Caenorhabditis elegans] Length = 228 Score = 105 bits (264), Expect = 1e-22 Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 4/103 (3%) Query: 1 MDNNNWRPSL--PNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELR 58 M+ + P + P P + W +++P R+ ++ +I + + H P I +++ Sbjct: 97 MNALSTIPIVKDPEPRPPGTSQPWHSEVPKTDREAVIERISKHIMLHPQRFEP--IWKIK 154 Query: 59 RIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSA 101 A E +IF A ++ +Y R + + + K+ G A Sbjct: 155 EDARAAELQIFEAAGSRDEYYRMVEERAPREQDKAPEGPGQEA 197
>gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Binding Protein) In Complex With Phosphorylated Kinase Inducible Domain (Pkid) Of Rat Creb (Cyclic Amp Response Element Binding Protein), Nmr 17 Structures Length = 81 Score = 105 bits (262), Expect = 2e-22 Identities = 11/79 (13%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIAARFEEKIFSGALNQT 76 W + D R +V+K+++ + + L A + E ++ A ++ Sbjct: 3 RKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANSRD 62 Query: 77 DYLRKISMKMLTMETKSQN 95 +Y ++ K+ ++ + + Sbjct: 63 EYYHLLAEKIYKIQKELEE 81
>gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japonica cultivar-group)] Length = 1392 Score = 104 bits (261), Expect = 3e-22 Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 1/102 (0%) Query: 12 NGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSG 71 ++ W R+ I+N +++ E++ A R E+ + Sbjct: 9 PASSSVSAAHWMATEDLGLRRNIINNMVKKFMTITNSQQDHHYREIQNYAIRCEQDALNK 68 Query: 72 ALNQTDYLRKISMKMLTMETK-SQNAAGSSAAIPAANNGTSI 112 N+ DYLR I+ +++ ME K ++ + + P+ +S Sbjct: 69 TTNKEDYLRCIAQRIMNMEMKVRRSQSLQAGTTPSTQRPSSQ 110
>gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [Caenorhabditis elegans] gi|7499689|pir||T16139 hypothetical protein F22F1.3 - Caenorhabditis elegans gi|1118044|gb|AAA83283.1| Hypothetical protein F22F1.3 [Caenorhabditis elegans] Length = 295 Score = 101 bits (252), Expect = 3e-21 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 3/95 (3%) Query: 24 TQLPPDSRQKIVNKIMETLKKHLPF--SGPEGINELRRIAARFEEKIFSGALNQTDYLRK 81 + L RQ ++ KI+ + EL+ A E+K F + +Y + Sbjct: 64 STLERGLRQYMITKIVREAVPRPNSDAKNDARMIELKEYATFMEKKSFEKVQTKDEYYAE 123 Query: 82 ISMKMLTMETKSQNAAGSSAAIPAAN-NGTSIDSI 115 ++ +L+M+ Q+ S P +N + + Sbjct: 124 LARIILSMQKHLQSRPKGSYEDPYSNIPPSHELAD 158
>gi|17552400|ref|NP_497145.1| CREB-binding protein like family member (3A735) [Caenorhabditis elegans] gi|7496696|pir||T33580 hypothetical protein C29F9.5 - Caenorhabditis elegans gi|3790687|gb|AAC68747.1| Hypothetical protein C29F9.5 [Caenorhabditis elegans] Length = 226 Score = 98.5 bits (245), Expect = 2e-20 Identities = 11/99 (11%), Positives = 29/99 (29%), Gaps = 2/99 (2%) Query: 9 SLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKK--HLPFSGPEGINELRRIAARFEE 66 + + W ++P R +++ KI + + ++ + + E Sbjct: 105 TPAEPKKPEHDQIWHLEVPKTYRSELIEKIYKGIMSNVKPGTLSEAQMDTWKEYSRSAEL 164 Query: 67 KIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPA 105 +IF A Y K+ + + + Sbjct: 165 QIFDTAQKLEAYYHMAREKVCRYQEGFPRRQKTEEKDES 203
>gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thaliana gi|3152587|gb|AAC17068.1| Similar to CREB-binding protein homolog gb|U88570 from D. melanogaster and contains similarity to callus-associated protein gb|U01961 from Nicotiana tabacum. EST gb|W43427 comes from this gene. [Arabidopsis thaliana] Length = 1516 Score = 93.9 bits (233), Expect = 5e-19 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 RQ + +I L++ P E + +A R EE +F A + DY+ + ++ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ++ Q ++ AN+ + IPT Sbjct: 111 ASLIKGRQ---LNNYNQRHANSSSVGTMIPT 138
>gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thaliana] Length = 1706 Score = 93.5 bits (232), Expect = 7e-19 Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLRK--ISMKM 86 RQ + + L++ P + +A R EE +F A+ + DY+ + + ++ Sbjct: 73 LRQYMQTLVFNMLQQRQPSPADAASKAKYMDVARRLEEGLFKMAVTKEDYMNRSTLESRI 132 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ++ Q ++ AN+ + IPT Sbjct: 133 TSLIKGRQ---INNYNQRHANSSSVGTMIPT 160
>gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] gi|12597461|gb|AAG60059.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] Length = 1654 Score = 93.1 bits (231), Expect = 9e-19 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 RQ + +I L++ P E + +A R EE +F A + DY+ + ++ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ++ Q ++ AN+ + IPT Sbjct: 111 ASLIKGRQ---LNNYNQRHANSSSVGTMIPT 138
>gi|17508323|ref|NP_493339.1| CREB-binding protein like family member (80.3 kD) (1N890) [Caenorhabditis elegans] gi|7505888|pir||T23651 hypothetical protein M01E5.6 - Caenorhabditis elegans gi|3878635|emb|CAB07643.1| Hypothetical protein M01E5.6 [Caenorhabditis elegans] gi|3879438|emb|CAB03290.1| Hypothetical protein M01E5.6 [Caenorhabditis elegans] Length = 702 Score = 92.3 bits (229), Expect = 1e-18 Identities = 17/125 (13%), Positives = 39/125 (31%), Gaps = 20/125 (16%) Query: 3 NNNWRPSLPNGE-------------PAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPF- 48 N N + + + +W + D R +V K+++ + Sbjct: 570 NTNQISNEETPKIDIFEGYNGSFLFGTNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNV 626 Query: 49 --SGPEGINELRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAA 106 E +L A + E +I + ++ +Y R + + + + K+ A Sbjct: 627 EEMNGELFKKLIANARKCETEILEASNDRDEYYRLMQLTVDQILKKTL-KKDQRATEHNH 685 Query: 107 NNGTS 111 T Sbjct: 686 QQPTQ 690
>gi|28279616|gb|AAH45472.1| Similar to PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein [Danio rerio] Length = 809 Score = 86.6 bits (214), Expect = 7e-17 Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 14/106 (13%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + DWR+ P RQK+V +I E ++K + + E +F+ A Sbjct: 2 DVPGPDSDWRS---PAFRQKVVAQIEEAMRKAGTGHT--------KSSTEMESHVFTKAK 50 Query: 74 NQTDYLRKISMKMLT---METKSQNAAGSSAAIPAANNGTSIDSIP 116 + +YL ++ ++ + K+Q A+ G P Sbjct: 51 TREEYLSMVARLIIHFRDIHKKAQGGPDPINALQNLPGGVPGVIGP 96
>gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thaliana] gi|15795129|dbj|BAB02507.1| CREB-binding protein-like [Arabidopsis thaliana] Length = 1670 Score = 85.8 bits (212), Expect = 1e-16 Identities = 16/97 (16%), Positives = 41/97 (42%), Gaps = 9/97 (9%) Query: 24 TQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYL--R 80 +Q RQ+++N+ L++ P + +L +A R E ++ A ++ DYL R Sbjct: 37 SQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFR 96 Query: 81 KISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 +++ + + + ++ + + + T Sbjct: 97 SFDVRVESTLKQLLSQRRAN------PSSSVSTMVQT 127
>gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic protein (5S403) [Caenorhabditis elegans] gi|7498278|pir||T20398 hypothetical protein E01B7.2 - Caenorhabditis elegans gi|5824421|emb|CAB54214.1| Hypothetical protein E01B7.2 [Caenorhabditis elegans] Length = 230 Score = 85.8 bits (212), Expect = 1e-16 Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DW+ + + R K V KI+ T P I+EL + E +S A N+ Y Sbjct: 56 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 115 Query: 81 KISMKMLTMETKSQNAA-----GSSAAIPAA 106 I + +M+ IP+ Sbjct: 116 GIESMIQSMQIAINRDPYLTKIRQMNEIPST 146
>gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabditis elegans Length = 337 Score = 85.8 bits (212), Expect = 1e-16 Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 5/91 (5%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DW+ + + R K V KI+ T P I+EL + E +S A N+ Y Sbjct: 177 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 236 Query: 81 KISMKMLTMETKSQNAA-----GSSAAIPAA 106 I + +M+ IP+ Sbjct: 237 GIESMIQSMQIAINRDPYLTKIRQMNEIPST 267
>gi|7493813|pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) gi|3859719|emb|CAA21993.1| possible regulatory protein [Candida albicans] Length = 1145 Score = 84.6 bits (209), Expect = 3e-16 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 2/102 (1%) Query: 5 NWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPE-GINELRRIAAR 63 N G + WR + RQK+V I+ TL + L S P + L ++A Sbjct: 6 NQNSLQQMGGGSNPNASWRAMYSGEERQKVVQIIINTLTE-LHGSNPNFNVQRLSKMAQD 64 Query: 64 FEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPA 105 FE+ ++ + ++ DYLR I MK+ + + Q A + Sbjct: 65 FEKLVYERSASKEDYLRAIKMKVHQLRVQKQQIAANQGGQIN 106
>gi|25518480|pir||D86302 hypothetical protein F17F16.9 - Arabidopsis thaliana gi|9954735|gb|AAG09088.1|AC026237_9 Hypothetical protein [Arabidopsis thaliana] Length = 238 Score = 79.2 bits (195), Expect = 1e-14 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 7/92 (7%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 R+ + + I L+K P + + A R EE +F A+ + +YL + ++ Sbjct: 8 IRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESRL 67 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSI-PT 117 ++ Q + A++ T +I PT Sbjct: 68 TSLIKGRQ---LNKYKHQHADSSTLGTTITPT 96
>gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] Length = 453 Score = 78.1 bits (192), Expect = 3e-14 Identities = 16/97 (16%), Positives = 41/97 (42%), Gaps = 9/97 (9%) Query: 24 TQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYL--R 80 +Q RQ+++N+ L++ P + +L +A R E ++ A ++ DYL R Sbjct: 6 SQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFR 65 Query: 81 KISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 +++ + + + ++ + + + T Sbjct: 66 SFDVRVESTLKQLLSQRRAN------PSSSVSTMVQT 96
>gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)] Length = 414 Score = 77.3 bits (190), Expect = 4e-14 Identities = 24/64 (37%), Positives = 42/64 (65%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DWRT+L D R ++ I+ +L+ L + + +L+++AAR EE+I+ A++ DYLR Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71 Query: 81 KISM 84 +IS+ Sbjct: 72 RISL 75
>gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cuniculi] gi|19069236|emb|CAD25704.1| MADS domain [Encephalitozoon cuniculi] Length = 776 Score = 73.5 bits (180), Expect = 7e-13 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 25 QLPPDSRQKIVNKIMETLKK--HLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLRKI 82 L + R++++ K+ LK+ P P I E A R E++I+ + ++ +YLR + Sbjct: 1 MLSQEERKQMILKLFVALKESNIFPGYTPVQIKE---AAIRAEQRIYEESGSKEEYLRGM 57 Query: 83 SMKMLTMETKSQNAAGSSAAIPAAN 107 + +E N + + + Sbjct: 58 DERFQRIERVVSNRSRADGRGKSTQ 82
>gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] gi|25411357|pir||E84491 hypothetical protein At2g10440 [imported] - Arabidopsis thaliana gi|4733973|gb|AAD28655.1| hypothetical protein [Arabidopsis thaliana] Length = 935 Score = 72.7 bits (178), Expect = 1e-12 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 5/76 (6%) Query: 3 NNNWRPSLPNG--EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 N NW+P+ G + A + DWR+Q P+ RQK+++KI+E K+ IN+ I Sbjct: 4 NTNWKPNEQGGNRDAANNRIDWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---I 60 Query: 61 AARFEEKIFSGALNQT 76 A++FEE +S A ++T Sbjct: 61 ASKFEENFYSIATDKT 76
>gi|32451779|gb|AAH54779.1| Pcqap protein [Mus musculus] Length = 749 Score = 71.9 bits (176), Expect = 2e-12 Identities = 18/104 (17%), Positives = 40/104 (38%), Gaps = 12/104 (11%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + + DWR+ RQK+V++I + ++K + + E +F A Sbjct: 2 DVSGQETDWRS---AAFRQKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAK 50 Query: 74 NQTDYLRKISMKMLTMETKSQNAAGSSAAIP-AANNGTSIDSIP 116 + +YL ++ ++ + +S + P A + P Sbjct: 51 TRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTP 94
>gi|21748618|dbj|BAC03446.1| FLJ00386 protein [Homo sapiens] Length = 811 Score = 71.5 bits (175), Expect = 2e-12 Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 11/91 (12%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + + DWR+ RQK+V++I + ++K + + E +F A Sbjct: 25 DVSGQETDWRST---AFRQKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAK 73 Query: 74 NQTDYLRKISMKMLTMETKSQNAAGSSAAIP 104 + +YL ++ ++ + +S + P Sbjct: 74 TRDEYLSLVARLIIHFRDIHNKKSQASVSDP 104
>gi|21312134|ref|NP_056973.2| positive cofactor 2, glutamine/Q-rich-associated protein; TPA inducible protein; TPA inducible gene-1; PC2-glutamine-rich-associated protein; trinucleotide repeat containing 7 [Homo sapiens] gi|15559260|gb|AAH13985.1|AAH13985 PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein [Homo sapiens] Length = 748 Score = 71.1 bits (174), Expect = 3e-12 Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 11/91 (12%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + + DWR+ RQK+V++I + ++K + + E +F A Sbjct: 2 DVSGQETDWRST---AFRQKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAK 50 Query: 74 NQTDYLRKISMKMLTMETKSQNAAGSSAAIP 104 + +YL ++ ++ + +S + P Sbjct: 51 TRDEYLSLVARLIIHFRDIHNKKSQASVSDP 81
>gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine-rich-associated protein [Homo sapiens] Length = 746 Score = 71.1 bits (174), Expect = 3e-12 Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 11/91 (12%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + + DWR+ RQK+V++I + ++K + + E +F A Sbjct: 2 DVSGQETDWRST---AFRQKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAK 50 Query: 74 NQTDYLRKISMKMLTMETKSQNAAGSSAAIP 104 + +YL ++ ++ + +S + P Sbjct: 51 TRDEYLSLVARLIIHFRDIHNKKSQASVSDP 81
>gi|27734440|sp|Q96RN5|PCAP_HUMAN Positive cofactor 2 glutamine/Q-rich-associated protein (PC2 glutamine/Q-rich-associated protein) (TPA-inducible gene-1) (TIG-1) (Activator-recruited cofactor 105 kDa component) (ARC105) (CTG repeat protein 7a) Length = 788 Score = 70.8 bits (173), Expect = 4e-12 Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 11/91 (12%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + + DWR+ RQK+V++I + ++K + + E +F A Sbjct: 2 DVSGQETDWRST---AFRQKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAK 50 Query: 74 NQTDYLRKISMKMLTMETKSQNAAGSSAAIP 104 + +YL ++ ++ + +S + P Sbjct: 51 TRDEYLSLVARLIIHFRDIHNKKSQASVSDP 81
>gi|18394390|ref|NP_564004.1| expressed protein [Arabidopsis thaliana] gi|21618240|gb|AAM67290.1| unknown [Arabidopsis thaliana] Length = 128 Score = 68.4 bits (167), Expect = 2e-11 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 7/92 (7%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 R+ + + I L+K P + + A R EE +F A+ + +YL + ++ Sbjct: 8 IRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESRL 67 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSI-PT 117 ++ Q + A++ T +I PT Sbjct: 68 TSLIKGRQ---LNKYKHQHADSSTLGTTITPT 96
>gi|20177999|sp|Q924H2|PCAP_MOUSE Positive cofactor 2 glutamine/Q-rich-associated protein (PC2 glutamine/Q-rich-associated protein) (mPcqap) Length = 792 Score = 66.9 bits (163), Expect = 7e-11 Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 12/101 (11%) Query: 17 MDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQT 76 DWR+ R K+V++I + ++K + + E +F A + Sbjct: 5 GQETDWRS---AAFRLKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAKTRD 53 Query: 77 DYLRKISMKMLTMETKSQNAAGSSAAIP-AANNGTSIDSIP 116 +YL ++ ++ + +S + P A + P Sbjct: 54 EYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTP 94
>gi|15809028|ref|NP_291087.1| positive cofactor 2, glutamine/Q-rich-associated protein [Mus musculus] gi|14276859|gb|AAK58424.1|AF328770_1 PC2-glutamine-rich-associated protein [Mus musculus] Length = 667 Score = 65.4 bits (159), Expect = 2e-10 Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 12/101 (11%) Query: 17 MDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQT 76 DWR+ R K+V++I + ++K + + E +F A + Sbjct: 5 GQETDWRS---AAFRLKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAKTRD 53 Query: 77 DYLRKISMKMLTMETKSQNAAGSSAAIP-AANNGTSIDSIP 116 +YL ++ ++ + +S + P A + P Sbjct: 54 EYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTP 94
>gi|28374176|gb|AAH46263.1| Similar to PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein [Xenopus laevis] Length = 846 Score = 60.0 bits (145), Expect = 8e-09 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 8/73 (10%) Query: 32 QKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLRKISMKMLTMET 91 QK+V++I E ++K + + E +F A + +YL ++ ++ Sbjct: 1 QKLVSQIDEAMRKAGVAHT--------KSSKEMESHVFLKAKTREEYLSLVARLIIHFRD 52 Query: 92 KSQNAAGSSAAIP 104 ++A+ P Sbjct: 53 IFNKKNQTAASDP 65
>gi|21956190|gb|AAM83255.1|AF378334_1 ARC105 [Xenopus laevis] Length = 754 Score = 51.9 bits (124), Expect = 2e-06 Identities = 7/48 (14%), Positives = 19/48 (39%) Query: 57 LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIP 104 + + E +F A + +YL ++ ++ + ++A P Sbjct: 8 HTKSSKDMESHVFLKAKTREEYLSLVARLIIHFRDILNKKSQAAATDP 55
>gi|20891927|ref|XP_147188.1| positive cofactor 2, multiprotein complex, glutamine/Q-rich-associated protein [Mus musculus] Length = 763 Score = 50.7 bits (121), Expect = 4e-06 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 1/61 (1%) Query: 57 LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIP-AANNGTSIDSI 115 + + E +F A + +YL ++ ++ + +S + P A + Sbjct: 8 HSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPT 67 Query: 116 P 116 P Sbjct: 68 P 68
>gi|3037135|gb|AAC12944.1| TPA inducible protein [Homo sapiens] Length = 579 Score = 46.9 bits (111), Expect = 6e-05 Identities = 7/48 (14%), Positives = 19/48 (39%) Query: 57 LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIP 104 + + E +F A + +YL ++ ++ + +S + P Sbjct: 8 HSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDP 55
>gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonica cultivar-group)] Length = 87 Score = 45.7 bits (108), Expect = 1e-04 Identities = 11/40 (27%), Positives = 24/40 (60%) Query: 35 VNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALN 74 + + M L+ L + + +L+++AAR EE+I+ A++ Sbjct: 35 IGQTMPILQMKLQTTTSTTLIDLQKVAARIEERIYKIAID 74
>gi|19920468|ref|NP_608528.1| CG4184-PA [Drosophila melanogaster] gi|5052530|gb|AAD38595.1|AF145620_1 BcDNA.GH03922 [Drosophila melanogaster] gi|7296198|gb|AAF51490.1| CG4184-PA [Drosophila melanogaster] Length = 749 Score = 39.9 bits (93), Expect = 0.008 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 11/73 (15%) Query: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78 T DW++Q RQ +++KI + L P + + A E IF + + +Y Sbjct: 2 TEDWQSQ---KFRQNVISKIHDLL--------PPNAQDQTKNAGVMENHIFRKSRTKDEY 50 Query: 79 LRKISMKMLTMET 91 L ++ + + Sbjct: 51 LGLVAKLFMHYKD 63
>gi|15230072|ref|NP_189057.1| expressed protein [Arabidopsis thaliana] Length = 343 Score = 38.4 bits (89), Expect = 0.022 Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 6/73 (8%) Query: 11 PNGEPAMDTG-DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRR----IAARFE 65 P P W + R I+ +I + + E + + + E Sbjct: 4 PGPRPYECVKRAWHSDRHQPIRGSIIRQIFRLAMEA-HSAATRKNKEWQEKLPVVVLKAE 62 Query: 66 EKIFSGALNQTDY 78 E ++S A ++ +Y Sbjct: 63 EIMYSKANSEEEY 75
>gi|7506661|pir||T16726 hypothetical protein R12B2.5 - Caenorhabditis elegans Length = 760 Score = 38.0 bits (88), Expect = 0.031 Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 17/107 (15%) Query: 18 DTGDWRTQLPPDSRQKIVNKIMETL----KKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 DW + P R+ ++ ++ L + P A + EE +F+ + Sbjct: 2 SEEDWPS---PKFREHVIQRLEPELARNRQNAPNLPVPG-------DARQVEEYVFAKCM 51 Query: 74 NQTDYLRKISMKMLTMETKSQNAAGSSAAIP---AANNGTSIDSIPT 117 ++ +Y+R I+ + + S++AA S P + T+ D PT Sbjct: 52 SKDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTADPQPT 98
>gi|9632980|ref|NP_050006.1| multifunctional protein [Sugarcane yellow leaf virus] gi|5616230|gb|AAD45683.1|AF157029_2 multifunctional protein [sugarcane yellow leaf virus] Length = 650 Score = 37.2 bits (86), Expect = 0.048 Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 24/90 (26%) Query: 27 PPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLRKISMKM 86 + IV+++++ + +L IA R EEK+ A N+ Sbjct: 528 TKELLNNIVSQLIQKI-------------DLSSIATRVEEKLLRQAQNKQQ--------- 565 Query: 87 LTMETKSQNAAGSSAA--IPAANNGTSIDS 114 KS +S P N + + Sbjct: 566 QNGGKKSPRKRKTSNTSSKPHTNGKSPPVT 595
>gi|30267511|gb|AAP21786.1| multifunctional protein [Sugarcane yellow leaf virus] Length = 650 Score = 37.2 bits (86), Expect = 0.052 Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 24/90 (26%) Query: 27 PPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLRKISMKM 86 + IV+++++ + +L IA R EEK+ A N+ Sbjct: 528 TKELLNNIVSQLIQKI-------------DLSSIATRVEEKLLRQAQNKQQ--------- 565 Query: 87 LTMETKSQNAAGSSAA--IPAANNGTSIDS 114 KS +S P N + + Sbjct: 566 QNGGKKSPRKRKTSNTSSKPHTNGKSPPVT 595
>gi|23470798|ref|ZP_00126130.1| hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 224 Score = 37.2 bits (86), Expect = 0.054 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 31 RQKIVNKIMETLKKHLPFSGPEGINELRRIA---ARFEEKIFSGAL 73 RQ++ N +++ + L P ++EL+ A A+ E A Sbjct: 162 RQEMRNDLIQKMMARLQQLTPSRLDELQAKADAVAKAEADALEAAQ 207
>gi|28871928|ref|NP_794547.1| lipoprotein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|28855181|gb|AAO58242.1| lipoprotein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 201 Score = 37.2 bits (86), Expect = 0.058 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 31 RQKIVNKIMETLKKHLPFSGPEGINELRRIA---ARFEEKIFSGAL 73 RQ++ N +++ L L P ++EL+ A A+ E A Sbjct: 139 RQEMRNDLIQKLMARLQQLTPSRLDELQAKADAVAKAEADALEAAQ 184
>gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thaliana] gi|28392894|gb|AAO41883.1| unknown protein [Arabidopsis thaliana] gi|28827750|gb|AAO50719.1| unknown protein [Arabidopsis thaliana] Length = 238 Score = 36.1 bits (83), Expect = 0.11 Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 6/76 (7%) Query: 11 PNGEPAMD-TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRR----IAARFE 65 P P W + R ++ +I + + E + + R E Sbjct: 4 PGPRPYDCIRRAWHSDRHQPMRGLLIQEIFR-IVCEIHSQSTRKNTEWQEKLPVVVLRAE 62 Query: 66 EKIFSGALNQTDYLRK 81 E ++S A ++ +Y+ Sbjct: 63 EIMYSKANSEAEYMDM 78
>gi|34499307|ref|NP_903522.1| hypothetical protein CV3852 [Chromobacterium violaceum ATCC 12472] gi|34105158|gb|AAQ61514.1| hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 350 Score = 35.7 bits (82), Expect = 0.16 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%) Query: 1 MDNNNWRPSLPNGEPAMD--TGDWRTQLPP--DSRQK-IVNKIMETLKKHLPFSGPEGIN 55 ++N P P + AMD W +QL P D R + I++ LK+ P Sbjct: 268 INNTTCTPLPPLVQIAMDIFRIHWHSQLTPQDDVRSRANQEAIVKNLKEKYPGMTDAIAK 327 Query: 56 ELRRIA 61 + ++A Sbjct: 328 AIDKVA 333
>gi|15610187|ref|NP_217566.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] gi|15842616|ref|NP_337653.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] gi|31794228|ref|NP_856721.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] gi|7477469|pir||E70861 hypothetical protein Rv3050c - Mycobacterium tuberculosis (strain H37RV) gi|2791648|emb|CAA16135.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] gi|13882931|gb|AAK47467.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] gi|31619823|emb|CAD96763.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] Length = 246 Score = 34.9 bits (80), Expect = 0.22 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 1/84 (1%) Query: 7 RPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI-NELRRIAARFE 65 P D R++ + R+K+ N+I++ + + GPE ++ A + Sbjct: 4 IPRPHPSAKPGVKVDARSERWREHRKKVRNEIVDAAFRAIDRLGPELSVRQIAEEAGTAK 63 Query: 66 EKIFSGALNQTDYLRKISMKMLTM 89 KI+ +++D L I M++ M Sbjct: 64 PKIYRHFTDKSDLLEAIGMRLRDM 87
>gi|6324522|ref|NP_014591.1| Regulates transcription of a diverse array of genes. Required for mating and sporulation.; Gal11p [Saccharomyces cerevisiae] gi|2507028|sp|P19659|GALY_YEAST TRANSCRIPTION REGULATORY PROTEIN GAL11 gi|2133177|pir||S66736 transcription activator GAL11 - yeast (Saccharomyces cerevisiae) gi|1419856|emb|CAA99056.1| GAL11 [Saccharomyces cerevisiae] Length = 1081 Score = 34.9 bits (80), Expect = 0.25 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 5/82 (6%) Query: 12 NGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKK--HLPFSGPEGINELRRIAARFEEKIF 69 + D L R K VN +++ L L + +++R A FE +F Sbjct: 1 MSAAPVQDKD---TLSNAERAKNVNGLLQVLMDINTLNGGSSDTADKIRIHAKNFEAALF 57 Query: 70 SGALNQTDYLRKISMKMLTMET 91 + + ++ +Y+ ++ K+ M Sbjct: 58 AKSSSKKEYMDSMNEKVAVMRN 79
>gi|171550|gb|AAA34622.1| auxiliary activator Length = 1081 Score = 34.9 bits (80), Expect = 0.25 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 5/82 (6%) Query: 12 NGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKK--HLPFSGPEGINELRRIAARFEEKIF 69 + D L R K VN +++ L L + +++R A FE +F Sbjct: 1 MSAAPVQDKD---TLSNAERAKNVNGLLQVLMDINTLNGGSSDTADKIRIHAKNFEAALF 57 Query: 70 SGALNQTDYLRKISMKMLTMET 91 + + ++ +Y+ ++ K+ M Sbjct: 58 AKSSSKKEYMDSMNEKVAVMRN 79
>gi|19704464|ref|NP_604026.1| Chromosome partition protein smc [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714732|gb|AAL95325.1| Chromosome partition protein smc [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 1193 Score = 33.8 bits (77), Expect = 0.50 Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 5/78 (6%) Query: 33 KIVNKIMETLKKHLPFSG--PEGINELRRIA---ARFEEKIFSGALNQTDYLRKISMKML 87 + NKI + L++ E + +A FE KIF+ + + I + Sbjct: 337 HLDNKIEKKLEEVTESKNKKDEISKNIVEMAAANKEFENKIFNLENIKVEKFDLIENRAK 396 Query: 88 TMETKSQNAAGSSAAIPA 105 + +S I Sbjct: 397 KVRDLELEKQLASNEIEN 414
>gi|25148756|ref|NP_741152.1| putative protein (3G918) [Caenorhabditis elegans] gi|21363104|sp|Q21955|YNL5_CAEEL Hypothetical protein R12B2.5 in chromosome III gi|17976542|gb|AAA50743.3| Hypothetical protein R12B2.5a [Caenorhabditis elegans] Length = 780 Score = 33.8 bits (77), Expect = 0.57 Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 14/92 (15%) Query: 18 DTGDWRTQLPPDSRQKIVNKIMETL----KKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 DW + P R+ ++ ++ L + P A + EE +F+ + Sbjct: 2 SEEDWPS---PKFREHVIQRLEPELARNRQNAPNLPVPG-------DARQVEEYVFAKCM 51 Query: 74 NQTDYLRKISMKMLTMETKSQNAAGSSAAIPA 105 ++ +Y+R I+ + + S++AA S P+ Sbjct: 52 SKDEYMRTIAKVINAINCNSKSAAVPSVLQPS 83
>gi|25148761|ref|NP_741151.1| putative protein (3G918) [Caenorhabditis elegans] gi|21450526|gb|AAM54164.1|U00066_6 Hypothetical protein R12B2.5b [Caenorhabditis elegans] Length = 777 Score = 33.8 bits (77), Expect = 0.62 Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 14/92 (15%) Query: 18 DTGDWRTQLPPDSRQKIVNKIMETL----KKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 DW + P R+ ++ ++ L + P A + EE +F+ + Sbjct: 2 SEEDWPS---PKFREHVIQRLEPELARNRQNAPNLPVPG-------DARQVEEYVFAKCM 51 Query: 74 NQTDYLRKISMKMLTMETKSQNAAGSSAAIPA 105 ++ +Y+R I+ + + S++AA S P+ Sbjct: 52 SKDEYMRTIAKVINAINCNSKSAAVPSVLQPS 83
>gi|984193|emb|CAA62537.1| transcriptional activator [Saccharomyces cerevisiae] Length = 351 Score = 33.4 bits (76), Expect = 0.72 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 5/82 (6%) Query: 12 NGEPAMDTGDWRTQLPPDSRQKIVNKIMETLK--KHLPFSGPEGINELRRIAARFEEKIF 69 + D L R K VN +++ L L + +++R A FE +F Sbjct: 1 MSAAPVQDKD---TLSNAERAKNVNGLLQVLMDINTLNGGSSDTADKIRIHAKNFEAALF 57 Query: 70 SGALNQTDYLRKISMKMLTMET 91 + + ++ +Y+ ++ K+ M Sbjct: 58 AKSSSKKEYMDSMNEKVAVMRN 79
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Sep 15, 2003 10:23 PM Number of letters in database: 490,690,828 Number of sequences in database: 1,524,159 Lambda K H 0.311 0.128 0.369 Gapped Lambda K H 0.267 0.0485 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,620,946 Number of Sequences: 1524159 Number of extensions: 821016 Number of successful extensions: 3141 Number of sequences better than 1.0: 20 Number of HSP's better than 1.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 3116 Number of HSP's gapped (non-prelim): 24 length of query: 117 length of database: 490,690,828 effective HSP length: 93 effective length of query: 24 effective length of database: 348,944,041 effective search space: 8374656984 effective search space used: 8374656984 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 75 (33.3 bits)