RID: 1063991399-1056-2519433.BLASTQ3 Query= NP_173030 (117 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,524,159 sequences; 490,690,828 total letters Results of PSI-Blast iteration 6 Skip to the first new sequence
Query= NP_173030 (117 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,524,159 sequences; 490,690,828 total letters
Legend: - means that the alignment score was below the threshold on the previous iteration - means that the alignment was checked on the previous iteration Hit list size Sequences with E-value BETTER than threshold Related Structures Score E Sequences producing significant alignments: (bits) Value gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thal... 161 3e-39 gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana >... 145 1e-34 gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 138 2e-32 gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhab... 137 4e-32 gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhab... 136 4e-32 gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhab... 136 4e-32 gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabd... 133 6e-31 gi|17554044|ref|NP_499201.1| CREB-binding protein like family me... 133 7e-31 gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica ... 130 4e-30 gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [... 124 2e-28 gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-bindin... 123 5e-28 gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thal... 123 8e-28 gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 122 1e-27 gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p... 120 6e-27 gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia califor... 118 2e-26 gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-termi... 118 3e-26 gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p... 116 5e-26 gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p... 115 1e-25 gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] ... 115 1e-25 gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] 115 1e-25 gi|631119|pir||S39162 transcription coactivator CREB-binding pro... 115 1e-25 gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein >gi|481698|p... 113 4e-25 gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] >... 113 5e-25 gi|737920|prf||1923401A protein CBP 113 5e-25 gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubi... 112 9e-25 gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambi... 112 1e-24 gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] 110 5e-24 gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly ... 107 3e-23 gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japon... 107 3e-23 gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Bin... 106 5e-23 gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melan... 106 9e-23 gi|17552402|ref|NP_497144.1| CREB-binding protein like family me... 104 3e-22 gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [... 95 3e-19 gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabdi... 92 2e-18 gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic... 91 3e-18 gi|7493813|pir||T18235 transcription activator GAL11 homolog - y... 89 2e-17 gi|17508323|ref|NP_493339.1| CREB-binding protein like family me... 88 3e-17 gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonic... 88 3e-17 gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis t... 83 9e-16 gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cunicu... 73 1e-12 gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonic... 52 2e-06 gi|17552400|ref|NP_497145.1| CREB-binding protein like family me... 45 3e-04 gi|28279616|gb|AAH45472.1| Similar to PC2 (positive cofactor 2, ... 41 0.004 gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabid... 41 0.004 Sequences with E-value WORSE than threshold gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related ... 40 0.006 gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thal... 39 0.021 gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arab... 38 0.021 gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thal... 36 0.11 gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] 36 0.15 gi|15230072|ref|NP_189057.1| expressed protein [Arabidopsis thal... 33 0.88 Alignments
Legend:
- means that the alignment score was below the threshold on the previous iteration
- means that the alignment was checked on the previous iteration
gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thal... 161 3e-39 gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana >... 145 1e-34 gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 138 2e-32 gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhab... 137 4e-32 gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhab... 136 4e-32 gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhab... 136 4e-32 gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabd... 133 6e-31 gi|17554044|ref|NP_499201.1| CREB-binding protein like family me... 133 7e-31 gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica ... 130 4e-30 gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [... 124 2e-28 gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-bindin... 123 5e-28 gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thal... 123 8e-28 gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 122 1e-27 gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p... 120 6e-27 gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia califor... 118 2e-26 gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-termi... 118 3e-26 gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p... 116 5e-26 gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p... 115 1e-25 gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] ... 115 1e-25 gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] 115 1e-25 gi|631119|pir||S39162 transcription coactivator CREB-binding pro... 115 1e-25 gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein >gi|481698|p... 113 4e-25 gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] >... 113 5e-25 gi|737920|prf||1923401A protein CBP 113 5e-25 gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubi... 112 9e-25 gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambi... 112 1e-24 gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] 110 5e-24 gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly ... 107 3e-23 gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japon... 107 3e-23 gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Bin... 106 5e-23 gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melan... 106 9e-23 gi|17552402|ref|NP_497144.1| CREB-binding protein like family me... 104 3e-22 gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [... 95 3e-19 gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabdi... 92 2e-18 gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic... 91 3e-18 gi|7493813|pir||T18235 transcription activator GAL11 homolog - y... 89 2e-17 gi|17508323|ref|NP_493339.1| CREB-binding protein like family me... 88 3e-17 gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonic... 88 3e-17 gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis t... 83 9e-16 gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cunicu... 73 1e-12 gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonic... 52 2e-06 gi|17552400|ref|NP_497145.1| CREB-binding protein like family me... 45 3e-04 gi|28279616|gb|AAH45472.1| Similar to PC2 (positive cofactor 2, ... 41 0.004 gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabid... 41 0.004
gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related ... 40 0.006 gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thal... 39 0.021 gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arab... 38 0.021 gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thal... 36 0.11 gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] 36 0.15 gi|15230072|ref|NP_189057.1| expressed protein [Arabidopsis thal... 33 0.88
>gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thaliana] Length = 1335 Score = 161 bits (408), Expect = 3e-39 Identities = 117/117 (100%), Positives = 117/117 (100%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT Sbjct: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117
>gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana gi|8927657|gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene. [Arabidopsis thaliana] Length = 1366 Score = 145 bits (368), Expect = 1e-34 Identities = 117/148 (79%), Positives = 117/148 (79%), Gaps = 31/148 (20%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 Query: 61 AARFEEKIFSGALNQ-------------------------------TDYLRKISMKMLTM 89 AARFEEKIFSGALNQ TDYLRKISMKMLTM Sbjct: 61 AARFEEKIFSGALNQRFVRQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTM 120 Query: 90 ETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ETKSQNAAGSSAAIPAANNGTSIDSIPT Sbjct: 121 ETKSQNAAGSSAAIPAANNGTSIDSIPT 148
>gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] Length = 1405 Score = 138 bits (348), Expect = 2e-32 Identities = 74/112 (66%), Positives = 94/112 (83%), Gaps = 2/112 (1%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MD NNWRP+ P GE +DTGDWRTQL PDSRQ+IVNKIM+TLK+HLPFSG +G+NEL++I Sbjct: 16 MDTNNWRPTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKI 75 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 A RFEEKI++ A +Q+DYLRKIS+KML+ME+KSQNA +S + + N G+S Sbjct: 76 AGRFEEKIYTAASSQSDYLRKISLKMLSMESKSQNAMPNS--LQSNNPGSSN 125
>gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhabditis elegans Length = 2027 Score = 137 bits (346), Expect = 4e-32 Identities = 22/117 (18%), Positives = 50/117 (42%), Gaps = 8/117 (6%) Query: 4 NNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIA 61 N P+LP + T +W Q+ D R +V K+++ + + +L A Sbjct: 580 NGEIPNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYA 639 Query: 62 ARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAA------GSSAAIPAANNGTSI 112 + E+++F A ++ +Y ++ K+ ++ + Q G++A A ++ Sbjct: 640 RKVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNE 696
>gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhabditis elegans] gi|14530537|emb|CAA82353.2| C. elegans CBP-1 protein (corresponding sequence R10E11.1a) [Caenorhabditis elegans] Length = 2045 Score = 136 bits (345), Expect = 4e-32 Identities = 22/117 (18%), Positives = 50/117 (42%), Gaps = 8/117 (6%) Query: 4 NNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIA 61 N P+LP + T +W Q+ D R +V K+++ + + +L A Sbjct: 569 NGEIPNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYA 628 Query: 62 ARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAA------GSSAAIPAANNGTSI 112 + E+++F A ++ +Y ++ K+ ++ + Q G++A A ++ Sbjct: 629 RKVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNE 685
>gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhabditis elegans] gi|20455476|sp|P34545|CBP1_CAEEL Protein cbp-1 gi|25299632|pir||G88564 protein R10E11.1 [imported] - Caenorhabditis elegans gi|17645979|emb|CAD18875.1| C. elegans CBP-1 protein (corresponding sequence R10E11.1b) [Caenorhabditis elegans] Length = 2056 Score = 136 bits (345), Expect = 4e-32 Identities = 22/117 (18%), Positives = 50/117 (42%), Gaps = 8/117 (6%) Query: 4 NNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIA 61 N P+LP + T +W Q+ D R +V K+++ + + +L A Sbjct: 580 NGEIPNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYA 639 Query: 62 ARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAA------GSSAAIPAANNGTSI 112 + E+++F A ++ +Y ++ K+ ++ + Q G++A A ++ Sbjct: 640 RKVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNE 696
>gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabditis elegans (fragment) Length = 316 Score = 133 bits (336), Expect = 6e-31 Identities = 22/110 (20%), Positives = 47/110 (42%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAA 62 N +LP + T +W Q+ D R IV K+++ + + +L A Sbjct: 144 TNGNISNLPPPNVPVRTKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYAR 203 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 + E+++F A+++ +Y ++ K+ ++ + Q S AA + Sbjct: 204 KVEKEVFETAIDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDE 253
>gi|17554044|ref|NP_499201.1| CREB-binding protein like family member (36.7 kD) (3L15) [Caenorhabditis elegans] gi|25395947|pir||D88569 protein K03H1.10 [imported] - Caenorhabditis elegans gi|3877003|emb|CAA82940.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans] gi|3878179|emb|CAA82665.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans] Length = 322 Score = 133 bits (335), Expect = 7e-31 Identities = 22/110 (20%), Positives = 47/110 (42%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAA 62 N +LP + T +W Q+ D R IV K+++ + + +L A Sbjct: 150 TNGNISNLPPPNVPVRTKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYAR 209 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 + E+++F A+++ +Y ++ K+ ++ + Q S AA + Sbjct: 210 KVEKEVFETAIDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDE 259
>gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-group)] Length = 1359 Score = 130 bits (328), Expect = 4e-30 Identities = 64/120 (53%), Positives = 83/120 (69%), Gaps = 12/120 (10%) Query: 5 NWRPSL-----------PN-GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPE 52 NWRP+ PN PA+ GDWR+QL ++R +IVNKIM+TLKKHLP S PE Sbjct: 8 NWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPE 67 Query: 53 GINELRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 G+NEL++IA RFEEKI++ A +Q+DYLRKIS+KML+METK+Q G++ I N S Sbjct: 68 GLNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQNPGNAQVIQNQNPPGSE 127
>gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [Homo sapiens] Length = 1553 Score = 124 bits (313), Expect = 2e-28 Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 25/138 (18%) Query: 1 MDNNNWRPSL-PNGEPAMD-----TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M N PSL P A W + D R +V+K+++ + P P + Sbjct: 544 MSENASVPSLGPMPTAAQPSTTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 600 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNA-----------AG 98 + L A + E ++ A N+ +Y ++ K+ ++ + + Sbjct: 601 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPN 660 Query: 99 SSAAIPAANNGTSIDSIP 116 ++ +P + N P Sbjct: 661 AAGMVPVSMNPGPNMGQP 678
>gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens] gi|3024341|sp|Q09472|P300_HUMAN E1A-associated protein p300 gi|627657|pir||A54277 transcription adaptor protein p300 - human gi|495301|gb|AAA18639.1| p300 protein Length = 2414 Score = 123 bits (310), Expect = 5e-28 Identities = 24/138 (17%), Positives = 49/138 (35%), Gaps = 25/138 (18%) Query: 1 MDNNNWRPSL-PNGEPAMD-----TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M N PSL P A W + D R +V+K+++ + P P + Sbjct: 544 MSENASVPSLGPMPTAAQPSTTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 600 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNA-----------AG 98 + L A + E ++ A N+ +Y ++ K+ ++ + + Sbjct: 601 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPN 660 Query: 99 SSAAIPAANNGTSIDSIP 116 ++ +P + N P Sbjct: 661 AAGMVPVSMNPGPNMGQP 678
>gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thaliana] gi|25513497|pir||C86292 F7H2.13 protein - Arabidopsis thaliana gi|8927658|gb|AAF82149.1|AC034256_13 ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene. [Arabidopsis thaliana] gi|12083256|gb|AAG48787.1|AF332424_1 unknown protein [Arabidopsis thaliana] Length = 179 Score = 123 bits (309), Expect = 8e-28 Identities = 64/101 (63%), Positives = 72/101 (71%) Query: 16 AMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQ 75 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQ Sbjct: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 Query: 76 TDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIP 116 T+YLR+I MKML METKSQNAAGSS+A S+P Sbjct: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVP 101
Score = 86.9 bits (215), Expect = 6e-17 Identities = 53/82 (64%), Positives = 65/82 (79%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEK 67 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL RIA EE Sbjct: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEEL 157 Query: 68 IFSGALNQTDYLRKISMKMLTM 89 IF+ A+NQ DYL KIS+KM TM Sbjct: 158 IFNSAINQEDYLGKISLKMRTM 179
>gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] Length = 3148 Score = 122 bits (307), Expect = 1e-27 Identities = 62/92 (67%), Positives = 77/92 (83%) Query: 9 SLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKI 68 S G +D DWR L DSRQ+IVNKIM+TLK+HLPFSGPEG+NEL+RIA RFEEKI Sbjct: 4 SRQKGVAMLDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKI 63 Query: 69 FSGALNQTDYLRKISMKMLTMETKSQNAAGSS 100 F+ A +Q+DYLRKIS+KML+ME++SQNA+GS+ Sbjct: 64 FTSATSQSDYLRKISLKMLSMESRSQNASGSN 95
>gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p300 [Rattus norvegicus] Length = 1605 Score = 120 bits (301), Expect = 6e-27 Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 18/128 (14%) Query: 1 MDNNNWR------PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M+ N P+ W + D R +V+K+++ + P P + Sbjct: 173 MNENASVASLGPLPTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 229 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQN----AAGSSAAIPA 105 + L A + E ++ A N+ +Y ++ K+ ++ + + +P+ Sbjct: 230 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPS 289 Query: 106 ANNGTSID 113 A + Sbjct: 290 APGMVPVP 297
>gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia californica] Length = 2245 Score = 118 bits (297), Expect = 2e-26 Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 8/106 (7%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P + P DW Q+ D R +V+K+++ + P + + L A Sbjct: 491 PDIVKSIPVSSRKDWHAQVTQDLRNHLVHKLVQAI---FPTPDQATLRDSRMKNLVAYAR 547 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANN 108 + E ++ A N+ Y ++ K+ ++ + + + A N Sbjct: 548 KVEGDMYESANNRGQYYHLLAEKIYKIQKELEEKRIQRMKVQNAPN 593
>gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-terminal} [mice, Peptide Partial, 688 aa] Length = 688 Score = 118 bits (296), Expect = 3e-26 Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 12/115 (10%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P+ W + D R +V+K+++ + P P + + L A Sbjct: 558 PTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAR 614 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQN----AAGSSAAIPAANNGTSID 113 + E ++ A N+ +Y ++ K+ ++ + + +P A + Sbjct: 615 KVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAPGMGPVP 669
>gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p300 [Rattus norvegicus] Length = 2156 Score = 116 bits (293), Expect = 5e-26 Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 18/128 (14%) Query: 1 MDNNNWR------PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M+ N P+ W + D R +V+K+++ + P P + Sbjct: 173 MNENASVASLGPLPTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 229 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQN----AAGSSAAIPA 105 + L A + E ++ A N+ +Y ++ K+ ++ + + +P+ Sbjct: 230 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPS 289 Query: 106 ANNGTSID 113 A + Sbjct: 290 APGMVPVP 297
>gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p300 [Mus musculus] gi|29244384|ref|NP_808489.1| hypothetical protein A730011L11 [Mus musculus] gi|26335221|dbj|BAC31311.1| unnamed protein product [Mus musculus] Length = 714 Score = 115 bits (290), Expect = 1e-25 Identities = 19/128 (14%), Positives = 43/128 (33%), Gaps = 18/128 (14%) Query: 1 MDNNNWR------PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M N P+ W + D R +V+K+++ + P P + Sbjct: 545 MSENAGVASLGPLPTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 601 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQN----AAGSSAAIPA 105 + L A + E ++ A N+ +Y ++ K+ ++ + + +P Sbjct: 602 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPN 661 Query: 106 ANNGTSID 113 A + Sbjct: 662 APGMGPVP 669
>gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] gi|3023440|sp|Q92793|CBP_HUMAN CREB-binding protein gi|2443859|gb|AAC51770.1| CREB-binding protein Length = 2442 Score = 115 bits (290), Expect = 1e-25 Identities = 17/120 (14%), Positives = 42/120 (35%), Gaps = 15/120 (12%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P+ W + D R +V+K+++ + P P + + L A Sbjct: 578 PTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAK 634 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSIDSI 115 + E ++ A ++ +Y ++ K+ ++ + + S PA + + Sbjct: 635 KVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQPPV 694
>gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] Length = 2442 Score = 115 bits (290), Expect = 1e-25 Identities = 17/120 (14%), Positives = 42/120 (35%), Gaps = 15/120 (12%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P+ W + D R +V+K+++ + P P + + L A Sbjct: 578 PTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAK 634 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSIDSI 115 + E ++ A ++ +Y ++ K+ ++ + + S PA + + Sbjct: 635 KVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQPPV 694
>gi|631119|pir||S39162 transcription coactivator CREB-binding protein - human Length = 2440 Score = 115 bits (290), Expect = 1e-25 Identities = 17/120 (14%), Positives = 42/120 (35%), Gaps = 15/120 (12%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P+ W + D R +V+K+++ + P P + + L A Sbjct: 578 PTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAK 634 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSIDSI 115 + E ++ A ++ +Y ++ K+ ++ + + S PA + + Sbjct: 635 KVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQPPV 694
>gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein gi|481698|pir||S39161 CREB-binding protein - mouse gi|435855|gb|AAB28651.1| CREB-binding protein; CBP [Mus sp.] Length = 2441 Score = 113 bits (285), Expect = 4e-25 Identities = 19/125 (15%), Positives = 45/125 (36%), Gaps = 20/125 (16%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P+ W + D R +V+K+++ + P P + + L A Sbjct: 577 PTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAK 633 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAA----------GSSAAIPA--ANNGT 110 + E ++ A ++ +Y ++ K+ ++ + + G+ A+PA A Sbjct: 634 KVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRTRLHKQGILGNQPALPASGAQPPV 693 Query: 111 SIDSI 115 + Sbjct: 694 IPPAQ 698
>gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] gi|19547887|gb|AAL87532.1| CREB-binding protein [Mus musculus] Length = 2429 Score = 113 bits (285), Expect = 5e-25 Identities = 19/125 (15%), Positives = 45/125 (36%), Gaps = 20/125 (16%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P+ W + D R +V+K+++ + P P + + L A Sbjct: 571 PTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAK 627 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAA----------GSSAAIPA--ANNGT 110 + E ++ A ++ +Y ++ K+ ++ + + G+ A+PA A Sbjct: 628 KVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPASGAQPPV 687 Query: 111 SIDSI 115 + Sbjct: 688 IPPAQ 692
>gi|737920|prf||1923401A protein CBP Length = 2441 Score = 113 bits (285), Expect = 5e-25 Identities = 19/125 (15%), Positives = 46/125 (36%), Gaps = 20/125 (16%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P+ W ++ D R +V+K+++ + P P + + L A Sbjct: 577 PTAAPPSSTGVRKGWHERVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAK 633 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAA----------GSSAAIPA--ANNGT 110 + E ++ A ++ +Y ++ K+ ++ + + G+ A+PA A Sbjct: 634 KVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRTRLHKQGILGNQPALPASGAQPPV 693 Query: 111 SIDSI 115 + Sbjct: 694 IPPAQ 698
>gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubinstein-Taybi syndrome) [Xenopus laevis] Length = 1047 Score = 112 bits (282), Expect = 9e-25 Identities = 18/124 (14%), Positives = 44/124 (35%), Gaps = 12/124 (9%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----L 57 N+ P+ W + D R +V+K+++ + P P + + L Sbjct: 562 NHGTMPTAAPPSSTGVRKAWHEHVTQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENL 618 Query: 58 RRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIP---AANNGTSIDS 114 A + E ++ A ++ +Y ++ K+ ++ + + S ++ Sbjct: 619 VAYARKVEGDMYESANSRDEYYHFLAEKIYKIQKELEEKRRSRLQKQGIMSSQAPLQAPG 678 Query: 115 -IPT 117 PT Sbjct: 679 AQPT 682
>gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambiae] gi|30178093|gb|EAA06516.2| ENSANGP00000004748 [Anopheles gambiae str. PEST] Length = 2572 Score = 112 bits (282), Expect = 1e-24 Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 8/95 (8%) Query: 13 GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEK 67 P T DW + PD R +V+K+++ + P P + + L A + E Sbjct: 736 AVPVQGTKDWHHSVTPDLRNHLVHKLVQAI---FPSPDPSAMFDKRMYNLVAYAKKVEGD 792 Query: 68 IFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAA 102 ++ A ++++Y ++ K+ ++ + + Sbjct: 793 MYEMANSRSEYYHLLAEKIYKIQKELEEKRQKRKE 827
>gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] Length = 555 Score = 110 bits (276), Expect = 5e-24 Identities = 17/120 (14%), Positives = 42/120 (35%), Gaps = 15/120 (12%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P+ W + D R +V+K+++ + P P + + L A Sbjct: 312 PTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAK 368 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSIDSI 115 + E ++ A ++ +Y ++ K+ ++ + + S PA + + Sbjct: 369 KVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQPPV 428
>gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly (Drosophila melanogaster) gi|1916930|gb|AAB53050.1| CREB-binding protein homolog [Drosophila melanogaster] Length = 3190 Score = 107 bits (269), Expect = 3e-23 Identities = 18/95 (18%), Positives = 43/95 (45%), Gaps = 8/95 (8%) Query: 13 GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEK 67 G P + DWR + D R +V+K+++ + P S P + + L A + E+ Sbjct: 934 GPPGDNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKD 990 Query: 68 IFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAA 102 ++ A ++++Y ++ K+ ++ + + Sbjct: 991 MYEMAKSRSEYYHLLAEKIYKIQKELEEKRLKRKE 1025
>gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japonica cultivar-group)] Length = 1392 Score = 107 bits (269), Expect = 3e-23 Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 1/102 (0%) Query: 12 NGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSG 71 ++ W R+ I+N +++ E++ A R E+ + Sbjct: 9 PASSSVSAAHWMATEDLGLRRNIINNMVKKFMTITNSQQDHHYREIQNYAIRCEQDALNK 68 Query: 72 ALNQTDYLRKISMKMLTMETK-SQNAAGSSAAIPAANNGTSI 112 N+ DYLR I+ +++ ME K ++ + + P+ +S Sbjct: 69 TTNKEDYLRCIAQRIMNMEMKVRRSQSLQAGTTPSTQRPSSQ 110
>gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Binding Protein) In Complex With Phosphorylated Kinase Inducible Domain (Pkid) Of Rat Creb (Cyclic Amp Response Element Binding Protein), Nmr 17 Structures Length = 81 Score = 106 bits (267), Expect = 5e-23 Identities = 13/82 (15%), Positives = 35/82 (42%), Gaps = 8/82 (9%) Query: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEKIFSGAL 73 W + D R +V+K+++ + P P + + L A + E ++ A Sbjct: 3 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 59 Query: 74 NQTDYLRKISMKMLTMETKSQN 95 ++ +Y ++ K+ ++ + + Sbjct: 60 SRDEYYHLLAEKIYKIQKELEE 81
>gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melanogaster] gi|22833041|gb|AAF46516.2| CG15319-PB [Drosophila melanogaster] Length = 3276 Score = 106 bits (265), Expect = 9e-23 Identities = 18/95 (18%), Positives = 43/95 (45%), Gaps = 8/95 (8%) Query: 13 GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEK 67 G P + DWR + D R +V+K+++ + P S P + + L A + E+ Sbjct: 934 GPPGDNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKD 990 Query: 68 IFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAA 102 ++ A ++++Y ++ K+ ++ + + Sbjct: 991 MYEMAKSRSEYYHLLAEKIYKIQKELEEKRLKRKE 1025
>gi|17552402|ref|NP_497144.1| CREB-binding protein like family member (3A733) [Caenorhabditis elegans] gi|7496697|pir||T33579 hypothetical protein C29F9.6 - Caenorhabditis elegans gi|3790688|gb|AAC68748.1| Hypothetical protein C29F9.6 [Caenorhabditis elegans] Length = 228 Score = 104 bits (260), Expect = 3e-22 Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 2/91 (2%) Query: 11 PNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFS 70 P P + W +++P R+ ++ +I + + H P I +++ A E +IF Sbjct: 109 PEPRPPGTSQPWHSEVPKTDREAVIERISKHIMLHPQRFEP--IWKIKEDARAAELQIFE 166 Query: 71 GALNQTDYLRKISMKMLTMETKSQNAAGSSA 101 A ++ +Y R + + + K+ G A Sbjct: 167 AAGSRDEYYRMVEERAPREQDKAPEGPGQEA 197
>gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [Caenorhabditis elegans] gi|7499689|pir||T16139 hypothetical protein F22F1.3 - Caenorhabditis elegans gi|1118044|gb|AAA83283.1| Hypothetical protein F22F1.3 [Caenorhabditis elegans] Length = 295 Score = 94.6 bits (235), Expect = 3e-19 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 3/92 (3%) Query: 24 TQLPPDSRQKIVNKIMETLKKHLPF--SGPEGINELRRIAARFEEKIFSGALNQTDYLRK 81 + L RQ ++ KI+ + EL+ A E+K F + +Y + Sbjct: 64 STLERGLRQYMITKIVREAVPRPNSDAKNDARMIELKEYATFMEKKSFEKVQTKDEYYAE 123 Query: 82 ISMKMLTMETKSQNAAGSSAAIPAAN-NGTSI 112 ++ +L+M+ Q+ S P +N + Sbjct: 124 LARIILSMQKHLQSRPKGSYEDPYSNIPPSHE 155
>gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabditis elegans Length = 337 Score = 91.5 bits (227), Expect = 2e-18 Identities = 19/70 (27%), Positives = 30/70 (42%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DW+ + + R K V KI+ T P I+EL + E +S A N+ Y Sbjct: 177 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 236 Query: 81 KISMKMLTME 90 I + +M+ Sbjct: 237 GIESMIQSMQ 246
>gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic protein (5S403) [Caenorhabditis elegans] gi|7498278|pir||T20398 hypothetical protein E01B7.2 - Caenorhabditis elegans gi|5824421|emb|CAB54214.1| Hypothetical protein E01B7.2 [Caenorhabditis elegans] Length = 230 Score = 91.1 bits (226), Expect = 3e-18 Identities = 19/70 (27%), Positives = 30/70 (42%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DW+ + + R K V KI+ T P I+EL + E +S A N+ Y Sbjct: 56 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 115 Query: 81 KISMKMLTME 90 I + +M+ Sbjct: 116 GIESMIQSMQ 125
>gi|7493813|pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) gi|3859719|emb|CAA21993.1| possible regulatory protein [Candida albicans] Length = 1145 Score = 88.8 bits (220), Expect = 2e-17 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%) Query: 10 LPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPE-GINELRRIAARFEEKI 68 G + WR + RQK+V I+ TL + L S P + L ++A FE+ + Sbjct: 11 QQMGGGSNPNASWRAMYSGEERQKVVQIIINTLTE-LHGSNPNFNVQRLSKMAQDFEKLV 69 Query: 69 FSGALNQTDYLRKISMKMLTMETKSQNAAGSSA 101 + + ++ DYLR I MK+ + + Q A + Sbjct: 70 YERSASKEDYLRAIKMKVHQLRVQKQQIAANQG 102
>gi|17508323|ref|NP_493339.1| CREB-binding protein like family member (80.3 kD) (1N890) [Caenorhabditis elegans] gi|7505888|pir||T23651 hypothetical protein M01E5.6 - Caenorhabditis elegans gi|3878635|emb|CAB07643.1| Hypothetical protein M01E5.6 [Caenorhabditis elegans] gi|3879438|emb|CAB03290.1| Hypothetical protein M01E5.6 [Caenorhabditis elegans] Length = 702 Score = 88.1 bits (218), Expect = 3e-17 Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 7/100 (7%) Query: 15 PAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPF---SGPEGINELRRIAARFEEKIFSG 71 + +W + D R +V K+++ + E +L A + E +I Sbjct: 595 GTNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEA 651 Query: 72 ALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTS 111 + ++ +Y R + + + + K+ A T Sbjct: 652 SNDRDEYYRLMQLTVDQILKKTL-KKDQRATEHNHQQPTQ 690
>gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)] Length = 414 Score = 87.7 bits (217), Expect = 3e-17 Identities = 24/64 (37%), Positives = 42/64 (65%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DWRT+L D R ++ I+ +L+ L + + +L+++AAR EE+I+ A++ DYLR Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71 Query: 81 KISM 84 +IS+ Sbjct: 72 RISL 75
>gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] gi|25411357|pir||E84491 hypothetical protein At2g10440 [imported] - Arabidopsis thaliana gi|4733973|gb|AAD28655.1| hypothetical protein [Arabidopsis thaliana] Length = 935 Score = 83.0 bits (205), Expect = 9e-16 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 5/76 (6%) Query: 3 NNNWRPSLPNG--EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 N NW+P+ G + A + DWR+Q P+ RQK+++KI+E K+ IN+ I Sbjct: 4 NTNWKPNEQGGNRDAANNRIDWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---I 60 Query: 61 AARFEEKIFSGALNQT 76 A++FEE +S A ++T Sbjct: 61 ASKFEENFYSIATDKT 76
>gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cuniculi] gi|19069236|emb|CAD25704.1| MADS domain [Encephalitozoon cuniculi] Length = 776 Score = 72.6 bits (178), Expect = 1e-12 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 25 QLPPDSRQKIVNKIMETLKK--HLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLRKI 82 L + R++++ K+ LK+ P P I E A R E++I+ + ++ +YLR + Sbjct: 1 MLSQEERKQMILKLFVALKESNIFPGYTPVQIKEA---AIRAEQRIYEESGSKEEYLRGM 57 Query: 83 SMKMLTMETKSQNAAGSSAAIPAAN 107 + +E N + + + Sbjct: 58 DERFQRIERVVSNRSRADGRGKSTQ 82
>gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonica cultivar-group)] Length = 87 Score = 52.2 bits (125), Expect = 2e-06 Identities = 11/41 (26%), Positives = 24/41 (58%) Query: 35 VNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQ 75 + + M L+ L + + +L+++AAR EE+I+ A++ Sbjct: 35 IGQTMPILQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDF 75
>gi|17552400|ref|NP_497145.1| CREB-binding protein like family member (3A735) [Caenorhabditis elegans] gi|7496696|pir||T33580 hypothetical protein C29F9.5 - Caenorhabditis elegans gi|3790687|gb|AAC68747.1| Hypothetical protein C29F9.5 [Caenorhabditis elegans] Length = 226 Score = 44.9 bits (106), Expect = 3e-04 Identities = 11/99 (11%), Positives = 29/99 (29%), Gaps = 2/99 (2%) Query: 9 SLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKK--HLPFSGPEGINELRRIAARFEE 66 + + W ++P R +++ KI + + ++ + + E Sbjct: 105 TPAEPKKPEHDQIWHLEVPKTYRSELIEKIYKGIMSNVKPGTLSEAQMDTWKEYSRSAEL 164 Query: 67 KIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPA 105 +IF A Y K+ + + + Sbjct: 165 QIFDTAQKLEAYYHMAREKVCRYQEGFPRRQKTEEKDES 203
>gi|28279616|gb|AAH45472.1| Similar to PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein [Danio rerio] Length = 809 Score = 41.1 bits (96), Expect = 0.004 Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 14/101 (13%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + DWR+ P RQK+V +I E ++K + + E +F+ A Sbjct: 2 DVPGPDSDWRS---PAFRQKVVAQIEEAMRKAGTGHT--------KSSTEMESHVFTKAK 50 Query: 74 NQTDYLRKISMKML---TMETKSQNAAGSSAAIPAANNGTS 111 + +YL ++ ++ + K+Q A+ G Sbjct: 51 TREEYLSMVARLIIHFRDIHKKAQGGPDPINALQNLPGGVP 91
>gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thaliana gi|3152587|gb|AAC17068.1| Similar to CREB-binding protein homolog gb|U88570 from D. melanogaster and contains similarity to callus-associated protein gb|U01961 from Nicotiana tabacum. EST gb|W43427 comes from this gene. [Arabidopsis thaliana] Length = 1516 Score = 41.1 bits (96), Expect = 0.004 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 RQ + +I L++ P E + +A R EE +F A + DY+ + ++ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ++ Q ++ AN+ + IPT Sbjct: 111 ASLIKGRQ---LNNYNQRHANSSSVGTMIPT 138
>gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] gi|12597461|gb|AAG60059.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] Length = 1654 Score = 40.3 bits (94), Expect = 0.006 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 RQ + +I L++ P E + +A R EE +F A + DY+ + ++ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ++ Q ++ AN+ + IPT Sbjct: 111 ASLIKGRQ---LNNYNQRHANSSSVGTMIPT 138
>gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thaliana] Length = 1706 Score = 38.8 bits (90), Expect = 0.021 Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLRK--ISMKM 86 RQ + + L++ P + +A R EE +F A+ + DY+ + + ++ Sbjct: 73 LRQYMQTLVFNMLQQRQPSPADAASKAKYMDVARRLEEGLFKMAVTKEDYMNRSTLESRI 132 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ++ Q ++ AN+ + IPT Sbjct: 133 TSLIKGRQ---INNYNQRHANSSSVGTMIPT 160
>gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thaliana] gi|15795129|dbj|BAB02507.1| CREB-binding protein-like [Arabidopsis thaliana] Length = 1670 Score = 38.4 bits (89), Expect = 0.021 Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 7/95 (7%) Query: 24 TQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR-- 80 +Q RQ+++N+ L++ P + +L +A R E ++ A ++ DYL Sbjct: 37 SQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFR 96 Query: 81 ----KISMKMLTMETKSQNAAGSSAAIPAANNGTS 111 ++ + + ++ + SS + G S Sbjct: 97 SFDVRVESTLKQLLSQRRANPSSSVSTMVQTPGVS 131
>gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thaliana] gi|28392894|gb|AAO41883.1| unknown protein [Arabidopsis thaliana] gi|28827750|gb|AAO50719.1| unknown protein [Arabidopsis thaliana] Length = 238 Score = 36.1 bits (83), Expect = 0.11 Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 4/73 (5%) Query: 10 LPNGEPAMD-TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI---NELRRIAARFE 65 P P W + R ++ +I + + S + +L + R E Sbjct: 3 RPGPRPYDCIRRAWHSDRHQPMRGLLIQEIFRIVCEIHSQSTRKNTEWQEKLPVVVLRAE 62 Query: 66 EKIFSGALNQTDY 78 E ++S A ++ +Y Sbjct: 63 EIMYSKANSEAEY 75
>gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] Length = 453 Score = 35.7 bits (82), Expect = 0.15 Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 7/95 (7%) Query: 24 TQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR-- 80 +Q RQ+++N+ L++ P + +L +A R E ++ A ++ DYL Sbjct: 6 SQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFR 65 Query: 81 ----KISMKMLTMETKSQNAAGSSAAIPAANNGTS 111 ++ + + ++ + SS + G S Sbjct: 66 SFDVRVESTLKQLLSQRRANPSSSVSTMVQTPGVS 100
>gi|15230072|ref|NP_189057.1| expressed protein [Arabidopsis thaliana] Length = 343 Score = 33.0 bits (75), Expect = 0.88 Identities = 12/74 (16%), Positives = 26/74 (35%), Gaps = 6/74 (8%) Query: 10 LPNGEPAMDTG-DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRR----IAARF 64 P P W + R I+ +I + + + E + + + Sbjct: 3 RPGPRPYECVKRAWHSDRHQPIRGSIIRQIFRLAMEAHSAATRKN-KEWQEKLPVVVLKA 61 Query: 65 EEKIFSGALNQTDY 78 EE ++S A ++ +Y Sbjct: 62 EEIMYSKANSEEEY 75
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Sep 15, 2003 10:23 PM Number of letters in database: 490,690,828 Number of sequences in database: 1,524,159 Lambda K H 0.311 0.128 0.369 Gapped Lambda K H 0.267 0.0486 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,612,906 Number of Sequences: 1524159 Number of extensions: 1301495 Number of successful extensions: 5000 Number of sequences better than 1.0: 13 Number of HSP's better than 1.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 4978 Number of HSP's gapped (non-prelim): 16 length of query: 117 length of database: 490,690,828 effective HSP length: 93 effective length of query: 24 effective length of database: 348,944,041 effective search space: 8374656984 effective search space used: 8374656984 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 75 (33.3 bits)