RID: 1063991361-25099-640529.BLASTQ3 Query= NP_173030 (117 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,524,159 sequences; 490,690,828 total letters Results of PSI-Blast iteration 5 Skip to the first new sequence
Query= NP_173030 (117 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,524,159 sequences; 490,690,828 total letters
Legend: - means that the alignment score was below the threshold on the previous iteration - means that the alignment was checked on the previous iteration Hit list size Sequences with E-value BETTER than threshold Related Structures Score E Sequences producing significant alignments: (bits) Value gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thal... 180 3e-45 gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana >... 165 1e-40 gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 157 3e-38 gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica ... 147 4e-35 gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhab... 142 1e-33 gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhab... 142 1e-33 gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhab... 142 1e-33 gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thal... 139 8e-33 gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 137 3e-32 gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia califor... 130 5e-30 gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [... 126 8e-29 gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-bindin... 125 2e-28 gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-termi... 125 2e-28 gi|631119|pir||S39162 transcription coactivator CREB-binding pro... 125 2e-28 gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] ... 125 2e-28 gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] 125 2e-28 gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p... 125 2e-28 gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabd... 124 3e-28 gi|17554044|ref|NP_499201.1| CREB-binding protein like family me... 124 4e-28 gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein >gi|481698|p... 123 8e-28 gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambi... 122 8e-28 gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] >... 122 9e-28 gi|737920|prf||1923401A protein CBP 122 1e-27 gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p... 122 1e-27 gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p... 122 1e-27 gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] 120 6e-27 gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubi... 119 8e-27 gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly ... 117 3e-26 gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melan... 116 7e-26 gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Bin... 115 2e-25 gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [... 103 6e-22 gi|7493813|pir||T18235 transcription activator GAL11 homolog - y... 102 1e-21 gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonic... 96 1e-19 gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis t... 94 3e-19 gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cunicu... 75 2e-13 gi|17508323|ref|NP_493339.1| CREB-binding protein like family me... 58 2e-08 gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonic... 54 4e-07 gi|17552402|ref|NP_497144.1| CREB-binding protein like family me... 48 3e-05 gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japon... 47 8e-05 gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabdi... 43 7e-04 gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic... 43 8e-04 Sequences with E-value WORSE than threshold gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabid... 40 0.008 gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related ... 40 0.010 gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thal... 39 0.015 gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arab... 39 0.019 gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thal... 37 0.059 gi|17552400|ref|NP_497145.1| CREB-binding protein like family me... 37 0.062 gi|27260988|dbj|BAC45105.1| OJ1705_C03.27 [Oryza sativa (japonic... 37 0.065 gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] 36 0.16 gi|7506661|pir||T16726 hypothetical protein R12B2.5 - Caenorhabd... 35 0.37 gi|29250862|gb|EAA42350.1| GLP_440_106999_105206 [Giardia lambli... 34 0.40 gi|15610187|ref|NP_217566.1| hypothetical protein Rv3050c [Mycob... 34 0.49 gi|32451779|gb|AAH54779.1| Pcqap protein [Mus musculus] 34 0.60 gi|21748618|dbj|BAC03446.1| FLJ00386 protein [Homo sapiens] 34 0.61 gi|21312134|ref|NP_056973.2| positive cofactor 2, glutamine/Q-ri... 33 0.87 gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine-rich-associat... 33 0.87 gi|27734440|sp|Q96RN5|PCAP_HUMAN Positive cofactor 2 glutamine/Q... 33 0.87 Alignments
Legend:
- means that the alignment score was below the threshold on the previous iteration
- means that the alignment was checked on the previous iteration
gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thal... 180 3e-45 gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana >... 165 1e-40 gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 157 3e-38 gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica ... 147 4e-35 gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhab... 142 1e-33 gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhab... 142 1e-33 gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhab... 142 1e-33 gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thal... 139 8e-33 gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 137 3e-32 gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia califor... 130 5e-30 gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [... 126 8e-29 gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-bindin... 125 2e-28 gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-termi... 125 2e-28 gi|631119|pir||S39162 transcription coactivator CREB-binding pro... 125 2e-28 gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] ... 125 2e-28 gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] 125 2e-28 gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p... 125 2e-28 gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabd... 124 3e-28 gi|17554044|ref|NP_499201.1| CREB-binding protein like family me... 124 4e-28 gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein >gi|481698|p... 123 8e-28 gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambi... 122 8e-28 gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] >... 122 9e-28 gi|737920|prf||1923401A protein CBP 122 1e-27 gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p... 122 1e-27 gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p... 122 1e-27 gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] 120 6e-27 gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubi... 119 8e-27 gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly ... 117 3e-26 gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melan... 116 7e-26 gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Bin... 115 2e-25 gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [... 103 6e-22 gi|7493813|pir||T18235 transcription activator GAL11 homolog - y... 102 1e-21 gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonic... 96 1e-19 gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis t... 94 3e-19 gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cunicu... 75 2e-13 gi|17508323|ref|NP_493339.1| CREB-binding protein like family me... 58 2e-08 gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonic... 54 4e-07 gi|17552402|ref|NP_497144.1| CREB-binding protein like family me... 48 3e-05 gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japon... 47 8e-05 gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabdi... 43 7e-04 gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic... 43 8e-04
gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabid... 40 0.008 gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related ... 40 0.010 gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thal... 39 0.015 gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arab... 39 0.019 gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thal... 37 0.059 gi|17552400|ref|NP_497145.1| CREB-binding protein like family me... 37 0.062 gi|27260988|dbj|BAC45105.1| OJ1705_C03.27 [Oryza sativa (japonic... 37 0.065 gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] 36 0.16 gi|7506661|pir||T16726 hypothetical protein R12B2.5 - Caenorhabd... 35 0.37 gi|29250862|gb|EAA42350.1| GLP_440_106999_105206 [Giardia lambli... 34 0.40 gi|15610187|ref|NP_217566.1| hypothetical protein Rv3050c [Mycob... 34 0.49 gi|32451779|gb|AAH54779.1| Pcqap protein [Mus musculus] 34 0.60 gi|21748618|dbj|BAC03446.1| FLJ00386 protein [Homo sapiens] 34 0.61 gi|21312134|ref|NP_056973.2| positive cofactor 2, glutamine/Q-ri... 33 0.87 gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine-rich-associat... 33 0.87 gi|27734440|sp|Q96RN5|PCAP_HUMAN Positive cofactor 2 glutamine/Q... 33 0.87
>gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thaliana] Length = 1335 Score = 180 bits (459), Expect = 3e-45 Identities = 117/117 (100%), Positives = 117/117 (100%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT Sbjct: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117
>gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana gi|8927657|gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene. [Arabidopsis thaliana] Length = 1366 Score = 165 bits (419), Expect = 1e-40 Identities = 117/148 (79%), Positives = 117/148 (79%), Gaps = 31/148 (20%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 Query: 61 AARFEEKIFSGALNQ-------------------------------TDYLRKISMKMLTM 89 AARFEEKIFSGALNQ TDYLRKISMKMLTM Sbjct: 61 AARFEEKIFSGALNQRFVRQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTM 120 Query: 90 ETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ETKSQNAAGSSAAIPAANNGTSIDSIPT Sbjct: 121 ETKSQNAAGSSAAIPAANNGTSIDSIPT 148
>gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] Length = 1405 Score = 157 bits (399), Expect = 3e-38 Identities = 74/112 (66%), Positives = 94/112 (83%), Gaps = 2/112 (1%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MD NNWRP+ P GE +DTGDWRTQL PDSRQ+IVNKIM+TLK+HLPFSG +G+NEL++I Sbjct: 16 MDTNNWRPTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKI 75 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 A RFEEKI++ A +Q+DYLRKIS+KML+ME+KSQNA +S + + N G+S Sbjct: 76 AGRFEEKIYTAASSQSDYLRKISLKMLSMESKSQNAMPNS--LQSNNPGSSN 125
>gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-group)] Length = 1359 Score = 147 bits (372), Expect = 4e-35 Identities = 64/120 (53%), Positives = 83/120 (69%), Gaps = 12/120 (10%) Query: 5 NWRPSL-----------PNGE-PAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPE 52 NWRP+ PN PA+ GDWR+QL ++R +IVNKIM+TLKKHLP S PE Sbjct: 8 NWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPE 67 Query: 53 GINELRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 G+NEL++IA RFEEKI++ A +Q+DYLRKIS+KML+METK+Q G++ I N S Sbjct: 68 GLNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQNPGNAQVIQNQNPPGSE 127
>gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhabditis elegans Length = 2027 Score = 142 bits (359), Expect = 1e-33 Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 14/116 (12%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN-----ELRRIAA 62 P+LP + T +W Q+ D R +V K+++ + P E +N +L A Sbjct: 584 PNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAI---FPEPNQEAMNDNRLKDLIAYAR 640 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQN------AAGSSAAIPAANNGTSI 112 + E+++F A ++ +Y ++ K+ ++ + Q G++A A ++ Sbjct: 641 KVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNE 696
>gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhabditis elegans] gi|20455476|sp|P34545|CBP1_CAEEL Protein cbp-1 gi|25299632|pir||G88564 protein R10E11.1 [imported] - Caenorhabditis elegans gi|17645979|emb|CAD18875.1| C. elegans CBP-1 protein (corresponding sequence R10E11.1b) [Caenorhabditis elegans] Length = 2056 Score = 142 bits (358), Expect = 1e-33 Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 14/116 (12%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN-----ELRRIAA 62 P+LP + T +W Q+ D R +V K+++ + P E +N +L A Sbjct: 584 PNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAI---FPEPNQEAMNDNRLKDLIAYAR 640 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQN------AAGSSAAIPAANNGTSI 112 + E+++F A ++ +Y ++ K+ ++ + Q G++A A ++ Sbjct: 641 KVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNE 696
>gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhabditis elegans] gi|14530537|emb|CAA82353.2| C. elegans CBP-1 protein (corresponding sequence R10E11.1a) [Caenorhabditis elegans] Length = 2045 Score = 142 bits (358), Expect = 1e-33 Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 14/116 (12%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN-----ELRRIAA 62 P+LP + T +W Q+ D R +V K+++ + P E +N +L A Sbjct: 573 PNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAI---FPEPNQEAMNDNRLKDLIAYAR 629 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQN------AAGSSAAIPAANNGTSI 112 + E+++F A ++ +Y ++ K+ ++ + Q G++A A ++ Sbjct: 630 KVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNE 685
>gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thaliana] gi|25513497|pir||C86292 F7H2.13 protein - Arabidopsis thaliana gi|8927658|gb|AAF82149.1|AC034256_13 ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene. [Arabidopsis thaliana] gi|12083256|gb|AAG48787.1|AF332424_1 unknown protein [Arabidopsis thaliana] Length = 179 Score = 139 bits (352), Expect = 8e-33 Identities = 64/101 (63%), Positives = 72/101 (71%) Query: 16 AMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQ 75 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQ Sbjct: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 Query: 76 TDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIP 116 T+YLR+I MKML METKSQNAAGSS+A S+P Sbjct: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVP 101
Score = 91.2 bits (226), Expect = 3e-18 Identities = 53/82 (64%), Positives = 65/82 (79%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEK 67 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL RIA EE Sbjct: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEEL 157 Query: 68 IFSGALNQTDYLRKISMKMLTM 89 IF+ A+NQ DYL KIS+KM TM Sbjct: 158 IFNSAINQEDYLGKISLKMRTM 179
>gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] Length = 3148 Score = 137 bits (346), Expect = 3e-32 Identities = 62/92 (67%), Positives = 77/92 (83%) Query: 9 SLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKI 68 S G +D DWR L DSRQ+IVNKIM+TLK+HLPFSGPEG+NEL+RIA RFEEKI Sbjct: 4 SRQKGVAMLDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKI 63 Query: 69 FSGALNQTDYLRKISMKMLTMETKSQNAAGSS 100 F+ A +Q+DYLRKIS+KML+ME++SQNA+GS+ Sbjct: 64 FTSATSQSDYLRKISLKMLSMESRSQNASGSN 95
>gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia californica] Length = 2245 Score = 130 bits (328), Expect = 5e-30 Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 8/106 (7%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P + P DW Q+ D R +V+K+++ + P + + L A Sbjct: 491 PDIVKSIPVSSRKDWHAQVTQDLRNHLVHKLVQAI---FPTPDQATLRDSRMKNLVAYAR 547 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANN 108 + E ++ A N+ Y ++ K+ ++ + + + A N Sbjct: 548 KVEGDMYESANNRGQYYHLLAEKIYKIQKELEEKRIQRMKVQNAPN 593
>gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [Homo sapiens] Length = 1553 Score = 126 bits (317), Expect = 8e-29 Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 25/138 (18%) Query: 1 MDNNNWRPSL-PNGEPAMD-----TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M N PSL P A W + D R +V+K+++ + P P + Sbjct: 544 MSENASVPSLGPMPTAAQPSTTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 600 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMET----------KSQNAAGS 99 + L A + E ++ A N+ +Y ++ K+ ++ + QN + Sbjct: 601 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPN 660 Query: 100 SA-AIPAANNGTSIDSIP 116 +A +P + N P Sbjct: 661 AAGMVPVSMNPGPNMGQP 678
>gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens] gi|3024341|sp|Q09472|P300_HUMAN E1A-associated protein p300 gi|627657|pir||A54277 transcription adaptor protein p300 - human gi|495301|gb|AAA18639.1| p300 protein Length = 2414 Score = 125 bits (315), Expect = 2e-28 Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 25/138 (18%) Query: 1 MDNNNWRPSL-PNGEPAMD-----TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M N PSL P A W + D R +V+K+++ + P P + Sbjct: 544 MSENASVPSLGPMPTAAQPSTTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 600 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMET----------KSQNAAGS 99 + L A + E ++ A N+ +Y ++ K+ ++ + QN + Sbjct: 601 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPN 660 Query: 100 SA-AIPAANNGTSIDSIP 116 +A +P + N P Sbjct: 661 AAGMVPVSMNPGPNMGQP 678
>gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-terminal} [mice, Peptide Partial, 688 aa] Length = 688 Score = 125 bits (315), Expect = 2e-28 Identities = 16/104 (15%), Positives = 39/104 (37%), Gaps = 12/104 (11%) Query: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEKIFSGAL 73 W + D R +V+K+++ + P P + + L A + E ++ A Sbjct: 569 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 625 Query: 74 NQTDYLRKISMKMLTMETKSQN----AAGSSAAIPAANNGTSID 113 N+ +Y ++ K+ ++ + + +P A + Sbjct: 626 NRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAPGMGPVP 669
>gi|631119|pir||S39162 transcription coactivator CREB-binding protein - human Length = 2440 Score = 125 bits (314), Expect = 2e-28 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 23/126 (18%) Query: 9 SLPNGEPAMD---TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 ++P P W + D R +V+K+++ + P P + + L Sbjct: 576 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 632 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMET----------KSQNAAGSSAAIPAANNGT 110 A + E ++ A ++ +Y ++ K+ ++ Q G+ A+PA G Sbjct: 633 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPA--PGA 690 Query: 111 SIDSIP 116 IP Sbjct: 691 QPPVIP 696
>gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] gi|3023440|sp|Q92793|CBP_HUMAN CREB-binding protein gi|2443859|gb|AAC51770.1| CREB-binding protein Length = 2442 Score = 125 bits (314), Expect = 2e-28 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 23/126 (18%) Query: 9 SLPNGEPAMD---TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 ++P P W + D R +V+K+++ + P P + + L Sbjct: 576 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 632 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMET----------KSQNAAGSSAAIPAANNGT 110 A + E ++ A ++ +Y ++ K+ ++ Q G+ A+PA G Sbjct: 633 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPA--PGA 690 Query: 111 SIDSIP 116 IP Sbjct: 691 QPPVIP 696
>gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] Length = 2442 Score = 125 bits (314), Expect = 2e-28 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 23/126 (18%) Query: 9 SLPNGEPAMD---TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 ++P P W + D R +V+K+++ + P P + + L Sbjct: 576 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 632 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMET----------KSQNAAGSSAAIPAANNGT 110 A + E ++ A ++ +Y ++ K+ ++ Q G+ A+PA G Sbjct: 633 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPA--PGA 690 Query: 111 SIDSIP 116 IP Sbjct: 691 QPPVIP 696
>gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p300 [Rattus norvegicus] Length = 1605 Score = 125 bits (314), Expect = 2e-28 Identities = 16/104 (15%), Positives = 40/104 (38%), Gaps = 12/104 (11%) Query: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEKIFSGAL 73 W + D R +V+K+++ + P P + + L A + E ++ A Sbjct: 197 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 253 Query: 74 NQTDYLRKISMKMLTMETKSQN----AAGSSAAIPAANNGTSID 113 N+ +Y ++ K+ ++ + + +P+A + Sbjct: 254 NRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPSAPGMVPVP 297
>gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabditis elegans (fragment) Length = 316 Score = 124 bits (312), Expect = 3e-28 Identities = 21/104 (20%), Positives = 46/104 (44%) Query: 9 SLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKI 68 +LP + T +W Q+ D R IV K+++ + + +L A + E+++ Sbjct: 150 NLPPPNVPVRTKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYARKVEKEV 209 Query: 69 FSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 F A+++ +Y ++ K+ ++ + Q S AA + Sbjct: 210 FETAIDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDE 253
>gi|17554044|ref|NP_499201.1| CREB-binding protein like family member (36.7 kD) (3L15) [Caenorhabditis elegans] gi|25395947|pir||D88569 protein K03H1.10 [imported] - Caenorhabditis elegans gi|3877003|emb|CAA82940.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans] gi|3878179|emb|CAA82665.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans] Length = 322 Score = 124 bits (312), Expect = 4e-28 Identities = 21/104 (20%), Positives = 46/104 (44%) Query: 9 SLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKI 68 +LP + T +W Q+ D R IV K+++ + + +L A + E+++ Sbjct: 156 NLPPPNVPVRTKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYARKVEKEV 215 Query: 69 FSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 F A+++ +Y ++ K+ ++ + Q S AA + Sbjct: 216 FETAIDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDE 259
>gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein gi|481698|pir||S39161 CREB-binding protein - mouse gi|435855|gb|AAB28651.1| CREB-binding protein; CBP [Mus sp.] Length = 2441 Score = 123 bits (309), Expect = 8e-28 Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 23/126 (18%) Query: 9 SLPNGEPAMD---TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 ++P P W + D R +V+K+++ + P P + + L Sbjct: 575 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 631 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMET----------KSQNAAGSSAAIPAANNGT 110 A + E ++ A ++ +Y ++ K+ ++ Q G+ A+PA+ G Sbjct: 632 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRTRLHKQGILGNQPALPAS--GA 689 Query: 111 SIDSIP 116 IP Sbjct: 690 QPPVIP 695
>gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambiae] gi|30178093|gb|EAA06516.2| ENSANGP00000004748 [Anopheles gambiae str. PEST] Length = 2572 Score = 122 bits (308), Expect = 8e-28 Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 8/95 (8%) Query: 13 GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEK 67 P T DW + PD R +V+K+++ + P P + + L A + E Sbjct: 736 AVPVQGTKDWHHSVTPDLRNHLVHKLVQAI---FPSPDPSAMFDKRMYNLVAYAKKVEGD 792 Query: 68 IFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAA 102 ++ A ++++Y ++ K+ ++ + + Sbjct: 793 MYEMANSRSEYYHLLAEKIYKIQKELEEKRQKRKE 827
>gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] gi|19547887|gb|AAL87532.1| CREB-binding protein [Mus musculus] Length = 2429 Score = 122 bits (308), Expect = 9e-28 Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 23/126 (18%) Query: 9 SLPNGEPAMD---TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 ++P P W + D R +V+K+++ + P P + + L Sbjct: 569 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 625 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMET----------KSQNAAGSSAAIPAANNGT 110 A + E ++ A ++ +Y ++ K+ ++ Q G+ A+PA+ G Sbjct: 626 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAS--GA 683 Query: 111 SIDSIP 116 IP Sbjct: 684 QPPVIP 689
>gi|737920|prf||1923401A protein CBP Length = 2441 Score = 122 bits (308), Expect = 1e-27 Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 23/126 (18%) Query: 9 SLPNGEPAMD---TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 ++P P W ++ D R +V+K+++ + P P + + L Sbjct: 575 TIPTAAPPSSTGVRKGWHERVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 631 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMET----------KSQNAAGSSAAIPAANNGT 110 A + E ++ A ++ +Y ++ K+ ++ Q G+ A+PA+ G Sbjct: 632 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRTRLHKQGILGNQPALPAS--GA 689 Query: 111 SIDSIP 116 IP Sbjct: 690 QPPVIP 695
>gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p300 [Rattus norvegicus] Length = 2156 Score = 122 bits (308), Expect = 1e-27 Identities = 16/104 (15%), Positives = 40/104 (38%), Gaps = 12/104 (11%) Query: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEKIFSGAL 73 W + D R +V+K+++ + P P + + L A + E ++ A Sbjct: 197 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 253 Query: 74 NQTDYLRKISMKMLTMETKSQN----AAGSSAAIPAANNGTSID 113 N+ +Y ++ K+ ++ + + +P+A + Sbjct: 254 NRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPSAPGMVPVP 297
>gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p300 [Mus musculus] gi|29244384|ref|NP_808489.1| hypothetical protein A730011L11 [Mus musculus] gi|26335221|dbj|BAC31311.1| unnamed protein product [Mus musculus] Length = 714 Score = 122 bits (307), Expect = 1e-27 Identities = 16/104 (15%), Positives = 39/104 (37%), Gaps = 12/104 (11%) Query: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEKIFSGAL 73 W + D R +V+K+++ + P P + + L A + E ++ A Sbjct: 569 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 625 Query: 74 NQTDYLRKISMKMLTMETKSQN----AAGSSAAIPAANNGTSID 113 N+ +Y ++ K+ ++ + + +P A + Sbjct: 626 NRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAPGMGPVP 669
>gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] Length = 555 Score = 120 bits (301), Expect = 6e-27 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 23/126 (18%) Query: 9 SLPNGEPAMD---TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 ++P P W + D R +V+K+++ + P P + + L Sbjct: 310 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 366 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMET----------KSQNAAGSSAAIPAANNGT 110 A + E ++ A ++ +Y ++ K+ ++ Q G+ A+PA G Sbjct: 367 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPA--PGA 424 Query: 111 SIDSIP 116 IP Sbjct: 425 QPPVIP 430
>gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubinstein-Taybi syndrome) [Xenopus laevis] Length = 1047 Score = 119 bits (300), Expect = 8e-27 Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 21/125 (16%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P+ W + D R +V+K+++ + P P + + L A Sbjct: 567 PTAAPPSSTGVRKAWHEHVTQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAR 623 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMET----------KSQNAAGSSAAIPAANNGTSI 112 + E ++ A ++ +Y ++ K+ ++ + Q S A + A + Sbjct: 624 KVEGDMYESANSRDEYYHFLAEKIYKIQKELEEKRRSRLQKQGIMSSQAPLQA---PGAQ 680 Query: 113 DSIPT 117 + T Sbjct: 681 PTALT 685
>gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly (Drosophila melanogaster) gi|1916930|gb|AAB53050.1| CREB-binding protein homolog [Drosophila melanogaster] Length = 3190 Score = 117 bits (295), Expect = 3e-26 Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 8/89 (8%) Query: 13 GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEK 67 G P + DWR + D R +V+K+++ + P S P + + L A + E+ Sbjct: 934 GPPGDNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKD 990 Query: 68 IFSGALNQTDYLRKISMKMLTMETKSQNA 96 ++ A ++++Y ++ K+ ++ + + Sbjct: 991 MYEMAKSRSEYYHLLAEKIYKIQKELEEK 1019
>gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melanogaster] gi|22833041|gb|AAF46516.2| CG15319-PB [Drosophila melanogaster] Length = 3276 Score = 116 bits (292), Expect = 7e-26 Identities = 18/89 (20%), Positives = 43/89 (48%), Gaps = 8/89 (8%) Query: 13 GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEK 67 G P + DWR + D R +V+K+++ + P S P + + L A + E+ Sbjct: 934 GPPGDNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKD 990 Query: 68 IFSGALNQTDYLRKISMKMLTMETKSQNA 96 ++ A ++++Y ++ K+ ++ + + Sbjct: 991 MYEMAKSRSEYYHLLAEKIYKIQKELEEK 1019
>gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Binding Protein) In Complex With Phosphorylated Kinase Inducible Domain (Pkid) Of Rat Creb (Cyclic Amp Response Element Binding Protein), Nmr 17 Structures Length = 81 Score = 115 bits (289), Expect = 2e-25 Identities = 13/82 (15%), Positives = 35/82 (42%), Gaps = 8/82 (9%) Query: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEKIFSGAL 73 W + D R +V+K+++ + P P + + L A + E ++ A Sbjct: 3 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 59 Query: 74 NQTDYLRKISMKMLTMETKSQN 95 ++ +Y ++ K+ ++ + + Sbjct: 60 SRDEYYHLLAEKIYKIQKELEE 81
>gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [Caenorhabditis elegans] gi|7499689|pir||T16139 hypothetical protein F22F1.3 - Caenorhabditis elegans gi|1118044|gb|AAA83283.1| Hypothetical protein F22F1.3 [Caenorhabditis elegans] Length = 295 Score = 103 bits (258), Expect = 6e-22 Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 7/94 (7%) Query: 24 TQLPPDSRQKIVNKIM-ETLKKHLPFSGPEG---INELRRIAARFEEKIFSGALNQTDYL 79 + L RQ ++ KI+ E + + P S + + EL+ A E+K F + +Y Sbjct: 64 STLERGLRQYMITKIVREAVPR--PNSDAKNDARMIELKEYATFMEKKSFEKVQTKDEYY 121 Query: 80 RKISMKMLTMETKSQNAAGSSAAIPAAN-NGTSI 112 +++ +L+M+ Q+ S P +N + Sbjct: 122 AELARIILSMQKHLQSRPKGSYEDPYSNIPPSHE 155
>gi|7493813|pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) gi|3859719|emb|CAA21993.1| possible regulatory protein [Candida albicans] Length = 1145 Score = 102 bits (255), Expect = 1e-21 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 2/92 (2%) Query: 10 LPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPE-GINELRRIAARFEEKI 68 G + WR + RQK+V I+ TL + L S P + L ++A FE+ + Sbjct: 11 QQMGGGSNPNASWRAMYSGEERQKVVQIIINTLTE-LHGSNPNFNVQRLSKMAQDFEKLV 69 Query: 69 FSGALNQTDYLRKISMKMLTMETKSQNAAGSS 100 + + ++ DYLR I MK+ + + Q A + Sbjct: 70 YERSASKEDYLRAIKMKVHQLRVQKQQIAANQ 101
>gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)] Length = 414 Score = 95.8 bits (238), Expect = 1e-19 Identities = 24/64 (37%), Positives = 42/64 (65%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DWRT+L D R ++ I+ +L+ L + + +L+++AAR EE+I+ A++ DYLR Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71 Query: 81 KISM 84 +IS+ Sbjct: 72 RISL 75
>gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] gi|25411357|pir||E84491 hypothetical protein At2g10440 [imported] - Arabidopsis thaliana gi|4733973|gb|AAD28655.1| hypothetical protein [Arabidopsis thaliana] Length = 935 Score = 94.3 bits (234), Expect = 3e-19 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 5/76 (6%) Query: 3 NNNWRPSLPNG--EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 N NW+P+ G + A + DWR+Q P+ RQK+++KI+E K+ IN+ I Sbjct: 4 NTNWKPNEQGGNRDAANNRIDWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---I 60 Query: 61 AARFEEKIFSGALNQT 76 A++FEE +S A ++T Sbjct: 61 ASKFEENFYSIATDKT 76
>gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cuniculi] gi|19069236|emb|CAD25704.1| MADS domain [Encephalitozoon cuniculi] Length = 776 Score = 75.0 bits (184), Expect = 2e-13 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Query: 25 QLPPDSRQKIVNKIMETLKKH--LPFSGPEGINELRRIAARFEEKIFSGALNQTDYLRKI 82 L + R++++ K+ LK+ P P I E A R E++I+ + ++ +YLR + Sbjct: 1 MLSQEERKQMILKLFVALKESNIFPGYTPVQIKEA---AIRAEQRIYEESGSKEEYLRGM 57 Query: 83 SMKMLTMETKSQNA 96 + +E N Sbjct: 58 DERFQRIERVVSNR 71
>gi|17508323|ref|NP_493339.1| CREB-binding protein like family member (80.3 kD) (1N890) [Caenorhabditis elegans] gi|7505888|pir||T23651 hypothetical protein M01E5.6 - Caenorhabditis elegans gi|3878635|emb|CAB07643.1| Hypothetical protein M01E5.6 [Caenorhabditis elegans] gi|3879438|emb|CAB03290.1| Hypothetical protein M01E5.6 [Caenorhabditis elegans] Length = 702 Score = 58.1 bits (140), Expect = 2e-08 Identities = 13/82 (15%), Positives = 33/82 (40%), Gaps = 6/82 (7%) Query: 15 PAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPF---SGPEGINELRRIAARFEEKIFSG 71 + +W + D R +V K+++ + E +L A + E +I Sbjct: 595 GTNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEA 651 Query: 72 ALNQTDYLRKISMKMLTMETKS 93 + ++ +Y R + + + + K+ Sbjct: 652 SNDRDEYYRLMQLTVDQILKKT 673
>gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonica cultivar-group)] Length = 87 Score = 54.2 bits (130), Expect = 4e-07 Identities = 11/41 (26%), Positives = 24/41 (58%) Query: 35 VNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQ 75 + + M L+ L + + +L+++AAR EE+I+ A++ Sbjct: 35 IGQTMPILQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDF 75
>gi|17552402|ref|NP_497144.1| CREB-binding protein like family member (3A733) [Caenorhabditis elegans] gi|7496697|pir||T33579 hypothetical protein C29F9.6 - Caenorhabditis elegans gi|3790688|gb|AAC68748.1| Hypothetical protein C29F9.6 [Caenorhabditis elegans] Length = 228 Score = 48.1 bits (114), Expect = 3e-05 Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 2/91 (2%) Query: 11 PNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFS 70 P P + W +++P R+ ++ +I + + H P I +++ A E +IF Sbjct: 109 PEPRPPGTSQPWHSEVPKTDREAVIERISKHIMLHPQRFEP--IWKIKEDARAAELQIFE 166 Query: 71 GALNQTDYLRKISMKMLTMETKSQNAAGSSA 101 A ++ +Y R + + + K+ G A Sbjct: 167 AAGSRDEYYRMVEERAPREQDKAPEGPGQEA 197
>gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japonica cultivar-group)] Length = 1392 Score = 46.5 bits (110), Expect = 8e-05 Identities = 19/92 (20%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Query: 22 WRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLRK 81 W R+ I+N +++ E++ A R E+ + N+ DYLR Sbjct: 19 WMATEDLGLRRNIINNMVKKFMTITNSQQDHHYREIQNYAIRCEQDALNKTTNKEDYLRC 78 Query: 82 ISMKMLTMETK-SQNAAGSSAAIPAANNGTSI 112 I+ +++ ME K ++ + + P+ +S Sbjct: 79 IAQRIMNMEMKVRRSQSLQAGTTPSTQRPSSQ 110
>gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabditis elegans Length = 337 Score = 43.4 bits (102), Expect = 7e-04 Identities = 19/70 (27%), Positives = 30/70 (42%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DW+ + + R K V KI+ T P I+EL + E +S A N+ Y Sbjct: 177 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 236 Query: 81 KISMKMLTME 90 I + +M+ Sbjct: 237 GIESMIQSMQ 246
>gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic protein (5S403) [Caenorhabditis elegans] gi|7498278|pir||T20398 hypothetical protein E01B7.2 - Caenorhabditis elegans gi|5824421|emb|CAB54214.1| Hypothetical protein E01B7.2 [Caenorhabditis elegans] Length = 230 Score = 43.4 bits (102), Expect = 8e-04 Identities = 19/70 (27%), Positives = 30/70 (42%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DW+ + + R K V KI+ T P I+EL + E +S A N+ Y Sbjct: 56 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 115 Query: 81 KISMKMLTME 90 I + +M+ Sbjct: 116 GIESMIQSMQ 125
>gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thaliana gi|3152587|gb|AAC17068.1| Similar to CREB-binding protein homolog gb|U88570 from D. melanogaster and contains similarity to callus-associated protein gb|U01961 from Nicotiana tabacum. EST gb|W43427 comes from this gene. [Arabidopsis thaliana] Length = 1516 Score = 40.0 bits (93), Expect = 0.008 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 RQ + +I L++ P E + +A R EE +F A + DY+ + ++ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDS 114 ++ Q + +++ GT I + Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPT 138
>gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] gi|12597461|gb|AAG60059.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] Length = 1654 Score = 39.6 bits (92), Expect = 0.010 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 RQ + +I L++ P E + +A R EE +F A + DY+ + ++ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDS 114 ++ Q + +++ GT I + Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPT 138
>gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thaliana] Length = 1706 Score = 39.2 bits (91), Expect = 0.015 Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLRK--ISMKM 86 RQ + + L++ P + +A R EE +F A+ + DY+ + + ++ Sbjct: 73 LRQYMQTLVFNMLQQRQPSPADAASKAKYMDVARRLEEGLFKMAVTKEDYMNRSTLESRI 132 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDS 114 ++ Q + +++ GT I + Sbjct: 133 TSLIKGRQINNYNQRHANSSSVGTMIPT 160
>gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thaliana] gi|15795129|dbj|BAB02507.1| CREB-binding protein-like [Arabidopsis thaliana] Length = 1670 Score = 38.8 bits (90), Expect = 0.019 Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 11/101 (10%) Query: 7 RPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFE 65 +P++ NG +Q RQ+++N+ L++ P + +L +A R E Sbjct: 29 QPNMVNGI---------SQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLE 79 Query: 66 EKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAA 106 ++ A ++ DYL S + +E+ + A P++ Sbjct: 80 SAMWRTATSKEDYLDFRSFDV-RVESTLKQLLSQRRANPSS 119
>gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thaliana] gi|28392894|gb|AAO41883.1| unknown protein [Arabidopsis thaliana] gi|28827750|gb|AAO50719.1| unknown protein [Arabidopsis thaliana] Length = 238 Score = 36.9 bits (85), Expect = 0.059 Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 7/82 (8%) Query: 10 LPNGEPAMD-TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI---NELRRIAARFE 65 P P W + R ++ +I + + S + +L + R E Sbjct: 3 RPGPRPYDCIRRAWHSDRHQPMRGLLIQEIFRIVCEIHSQSTRKNTEWQEKLPVVVLRAE 62 Query: 66 EKIFSGALNQTDYLRKISMKML 87 E ++S A ++ +Y + MK L Sbjct: 63 EIMYSKANSEAEY---MDMKTL 81
>gi|17552400|ref|NP_497145.1| CREB-binding protein like family member (3A735) [Caenorhabditis elegans] gi|7496696|pir||T33580 hypothetical protein C29F9.5 - Caenorhabditis elegans gi|3790687|gb|AAC68747.1| Hypothetical protein C29F9.5 [Caenorhabditis elegans] Length = 226 Score = 36.9 bits (85), Expect = 0.062 Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 4/98 (4%) Query: 12 NGEPAMDTGD--WRTQLPPDSRQKIVNKIMETLKK--HLPFSGPEGINELRRIAARFEEK 67 EP D W ++P R +++ KI + + ++ + + E + Sbjct: 106 PAEPKKPEHDQIWHLEVPKTYRSELIEKIYKGIMSNVKPGTLSEAQMDTWKEYSRSAELQ 165 Query: 68 IFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPA 105 IF A Y K+ + + + Sbjct: 166 IFDTAQKLEAYYHMAREKVCRYQEGFPRRQKTEEKDES 203
>gi|27260988|dbj|BAC45105.1| OJ1705_C03.27 [Oryza sativa (japonica cultivar-group)] Length = 194 Score = 36.9 bits (85), Expect = 0.065 Identities = 8/21 (38%), Positives = 14/21 (66%) Query: 21 DWRTQLPPDSRQKIVNKIMET 41 DWRT+L D R ++ + I++ Sbjct: 12 DWRTRLGQDIRDRVTHDILQA 32
>gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] Length = 453 Score = 35.7 bits (82), Expect = 0.16 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 2/78 (2%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLRKISMKMLT 88 RQ+++N+ L++ P + +L +A R E ++ A ++ DYL S + Sbjct: 12 LRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFRSFDV-R 70 Query: 89 METKSQNAAGSSAAIPAA 106 +E+ + A P++ Sbjct: 71 VESTLKQLLSQRRANPSS 88
>gi|7506661|pir||T16726 hypothetical protein R12B2.5 - Caenorhabditis elegans Length = 760 Score = 34.6 bits (79), Expect = 0.37 Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 21/110 (19%) Query: 17 MDTGDWRTQLPPDSRQKIVNKIMETLKK------HLPFSGPEGINELRRIAARFEEKIFS 70 M DW + P R+ ++ ++ L + +LP G A + EE +F+ Sbjct: 1 MSEEDWPS---PKFREHVIQRLEPELARNRQNAPNLPVPGD---------ARQVEEYVFA 48 Query: 71 GALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPA---ANNGTSIDSIPT 117 +++ +Y+R I+ + + S++AA S P+ + T+ D PT Sbjct: 49 KCMSKDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTADPQPT 98
>gi|29250862|gb|EAA42350.1| GLP_440_106999_105206 [Giardia lamblia ATCC 50803] Length = 597 Score = 34.2 bits (78), Expect = 0.40 Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 20/108 (18%) Query: 28 PDSRQKIV---NKIMETLKKHL----PFSGPEGINELRRIAARFEEKI-------FSGAL 73 D R IV K+ E ++ + + + E R+ + E+KI F Sbjct: 476 QDMRSHIVDLETKLAEKTREAESLRGETTSTKLLEEARKYISDLEKKIQCLQQTVFKECQ 535 Query: 74 NQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTS----IDSIPT 117 ++D L +S L + +A S+ PA S P+ Sbjct: 536 ERSDLLYTLSS--LKAQNAELSARRGSSITPALPPLGSTGSVQPGQPS 581
>gi|15610187|ref|NP_217566.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] gi|15842616|ref|NP_337653.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] gi|31794228|ref|NP_856721.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] gi|7477469|pir||E70861 hypothetical protein Rv3050c - Mycobacterium tuberculosis (strain H37RV) gi|2791648|emb|CAA16135.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] gi|13882931|gb|AAK47467.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] gi|31619823|emb|CAD96763.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] Length = 246 Score = 34.2 bits (78), Expect = 0.49 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 7/84 (8%) Query: 8 PSLPNGEPAMDTGD-WRTQLPPDSRQKIVNKIMETLKKHLPFSGPE-GINELRRIAARFE 65 PS G + WR R+K+ N+I++ + + GPE + ++ A + Sbjct: 9 PSAKPGVKVDARSERWREH-----RKKVRNEIVDAAFRAIDRLGPELSVRQIAEEAGTAK 63 Query: 66 EKIFSGALNQTDYLRKISMKMLTM 89 KI+ +++D L I M++ M Sbjct: 64 PKIYRHFTDKSDLLEAIGMRLRDM 87
>gi|32451779|gb|AAH54779.1| Pcqap protein [Mus musculus] Length = 749 Score = 33.8 bits (77), Expect = 0.60 Identities = 18/99 (18%), Positives = 36/99 (36%), Gaps = 15/99 (15%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DWR+ RQK+V++I + ++K + + E +F A + +YL Sbjct: 9 DWRS---AAFRQKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAKTRDEYLS 57 Query: 81 KISMKMLTME----TKSQNAAGSSAAIPAANNGTSIDSI 115 ++ ++ KSQ + + G Sbjct: 58 LVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGA 96
>gi|21748618|dbj|BAC03446.1| FLJ00386 protein [Homo sapiens] Length = 811 Score = 33.8 bits (77), Expect = 0.61 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 14/85 (16%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DWR+ RQK+V++I + ++K + + E +F A + +YL Sbjct: 32 DWRST---AFRQKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAKTRDEYLS 80 Query: 81 KISMKML---TMETKSQNAAGSSAA 102 ++ ++ + K A+ S Sbjct: 81 LVARLIIHFRDIHNKKSQASVSDPM 105
>gi|21312134|ref|NP_056973.2| positive cofactor 2, glutamine/Q-rich-associated protein; TPA inducible protein; TPA inducible gene-1; PC2-glutamine-rich-associated protein; trinucleotide repeat containing 7 [Homo sapiens] gi|15559260|gb|AAH13985.1|AAH13985 PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein [Homo sapiens] Length = 748 Score = 33.0 bits (75), Expect = 0.87 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 14/85 (16%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DWR+ RQK+V++I + ++K + + E +F A + +YL Sbjct: 9 DWRST---AFRQKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAKTRDEYLS 57 Query: 81 KISMKML---TMETKSQNAAGSSAA 102 ++ ++ + K A+ S Sbjct: 58 LVARLIIHFRDIHNKKSQASVSDPM 82
>gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine-rich-associated protein [Homo sapiens] Length = 746 Score = 33.0 bits (75), Expect = 0.87 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 14/85 (16%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DWR+ RQK+V++I + ++K + + E +F A + +YL Sbjct: 9 DWRST---AFRQKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAKTRDEYLS 57 Query: 81 KISMKML---TMETKSQNAAGSSAA 102 ++ ++ + K A+ S Sbjct: 58 LVARLIIHFRDIHNKKSQASVSDPM 82
>gi|27734440|sp|Q96RN5|PCAP_HUMAN Positive cofactor 2 glutamine/Q-rich-associated protein (PC2 glutamine/Q-rich-associated protein) (TPA-inducible gene-1) (TIG-1) (Activator-recruited cofactor 105 kDa component) (ARC105) (CTG repeat protein 7a) Length = 788 Score = 33.0 bits (75), Expect = 0.87 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 14/85 (16%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DWR+ RQK+V++I + ++K + + E +F A + +YL Sbjct: 9 DWRST---AFRQKLVSQIEDAMRKAGVAH--------SKSSKDMESHVFLKAKTRDEYLS 57 Query: 81 KISMKML---TMETKSQNAAGSSAA 102 ++ ++ + K A+ S Sbjct: 58 LVARLIIHFRDIHNKKSQASVSDPM 82
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Sep 15, 2003 10:23 PM Number of letters in database: 490,690,828 Number of sequences in database: 1,524,159 Lambda K H 0.311 0.128 0.369 Gapped Lambda K H 0.267 0.0484 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,610,956 Number of Sequences: 1524159 Number of extensions: 568949 Number of successful extensions: 1614 Number of sequences better than 1.0: 6 Number of HSP's better than 1.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 1606 Number of HSP's gapped (non-prelim): 7 length of query: 117 length of database: 490,690,828 effective HSP length: 93 effective length of query: 24 effective length of database: 348,944,041 effective search space: 8374656984 effective search space used: 8374656984 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 75 (33.3 bits)