BLASTP 2.2.6 [Apr-09-2003]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1056973419-029541-12229

Query= At1g15790 [1-145]
         (145 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,459,938 sequences; 468,778,868 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs



Results of PSI-Blast iteration 6

Skip to the first new sequence

Legend:
 - means that the alignment score was below the threshold on the previous iteration 
 - means that the alignment was checked on the previous iteration 


Hit list size 
Sequences with E-value BETTER than threshold
Related Structures
                                                                     Score    E
Sequences producing significant alignments:                          (bits) Value


 gi|22329593|ref|NP_173031.2|  expressed protein [Arabidopsis thal...   186   7e-47 

 gi|15218294|ref|NP_173030.1|  expressed protein [Arabidopsis thal...   159   8e-39 

 gi|24461867|gb|AAN62354.1|AF506028_23  CTV.22 [Poncirus trifoliata]    148   2e-35 

 gi|25511635|pir||B86292  F7H2.12 protein - Arabidopsis thaliana >...   143   4e-34 

 gi|31753089|gb|AAH53889.1|  Unknown (protein for IMAGE:6151364) [...   139   9e-33 

 gi|21243753|ref|NP_643335.1|  transcriptional regulator [Xanthomo...   138   1e-32 

 gi|2133462|pir||S60123  hypothetical protein R10E11.1 - Caenorhab...   137   2e-32 

 gi|17552710|ref|NP_499160.1|  CBP/p300 homolog CBP-1 (cbp-1) [Cae...   137   3e-32 

 gi|17552708|ref|NP_499161.1|  CBP/p300 homolog CBP-1 (cbp-1) [Cae...   137   3e-32 

 gi|4557557|ref|NP_001420.1|  E1A binding protein p300; E1A-bindin...   136   5e-32 

 gi|28486616|ref|XP_283295.1|  similar to E1A-associated protein p...   132   1e-30 

 gi|27666550|ref|XP_235770.1|  similar to E1A-associated protein p...   128   2e-29 

 gi|27663074|ref|XP_235502.1|  similar to E1A-associated protein p...   124   2e-28 

 gi|24461860|gb|AAN62347.1|AF506028_14  CTV.20 [Poncirus trifoliata]    122   8e-28 

 gi|631119|pir||S39162  transcription coactivator CREB-binding pro...   122   1e-27 

 gi|4758056|ref|NP_004371.1|  CREB binding protein [Homo sapiens] ...   122   1e-27 

 gi|482238|pir||S41033  hypothetical protein K03H1.10 - Caenorhabd...   122   1e-27 

 gi|4321116|gb|AAC51331.2|  CREB-binding protein [Homo sapiens]         122   1e-27 

 gi|17554044|ref|NP_499201.1|  TAZ zinc finger and KIX domain cont...   121   1e-27 

 gi|28071313|dbj|BAC56002.1|  P0705A05.20 [Oryza sativa (japonica ...   119   6e-27 

 gi|19547885|gb|AAL87531.1|  CREB-binding protein [Mus musculus] >...   119   8e-27 

 gi|737920|prf||1923401A  protein CBP                                   119   1e-26 

 gi|547239|gb|AAB31182.1|  p300=transcription coactivator {N-termi...   118   1e-26 

 gi|1345703|sp|P45481|CBP_MOUSE  CREB-binding protein >gi|481698|p...   118   1e-26 

 gi|2996629|gb|AAC08447.1|  CBP [Homo sapiens]                          116   5e-26 

 gi|21307831|gb|AAL54859.1|  CREB-binding protein [Aplysia califor...   115   1e-25 

 gi|27881767|gb|AAH44677.1|  Similar to CREB binding protein (Rubi...   113   4e-25 

 gi|17508323|ref|NP_493339.1|  KIX domain containing protein famil...   109   6e-24 

 gi|31204369|ref|XP_311133.1|  ENSANGP00000004748 [Anopheles gambi...   107   3e-23 

 gi|7511830|pir||T13828  CREB-binding protein homolog - fruit fly ...   106   5e-23 

 gi|17552402|ref|NP_497144.1|  TAZ zinc finger family member [Caen...   105   1e-22 

 gi|24640865|ref|NP_524642.2|  nejire CG15319-PB [Drosophila melan...   105   2e-22 

 gi|4139873|pdb|1KDX|A  Chain A, Kix Domain Of Mouse Cbp (Creb Bin...   101   2e-21 

 gi|17567279|ref|NP_509376.1|  KIX domain containing protein famil...    90   7e-18 

 gi|27260984|dbj|BAC45101.1|  OJ1705_C03.23 [Oryza sativa (japonic...    88   3e-17 

 gi|7493813|pir||T18235  transcription activator GAL11 homolog - y...    86   8e-17 

 gi|23127315|ref|ZP_00109188.1|  hypothetical protein [Nostoc punc...    76   1e-13 

 gi|19074594|ref|NP_586100.1|  MADS domain [Encephalitozoon cunicu...    71   3e-12 

 gi|15226772|ref|NP_178842.1|  hypothetical protein [Arabidopsis t...    69   1e-11 

 gi|27260985|dbj|BAC45102.1|  OJ1705_C03.24 [Oryza sativa (japonic...    47   4e-05 

 gi|17552400|ref|NP_497145.1|  TAZ zinc finger family member [Caen...    43   7e-04 

 gi|17559186|ref|NP_507512.1|  Predicted CDS, putative cytoplasmic...    42   0.001 

 gi|25396635|pir||E89403  protein C06H5.4 [imported] - Caenorhabdi...    42   0.002 

 gi|7487910|pir||T01055  hypothetical protein YUP8H12R.38 - Arabid...    41   0.004 


Sequences with E-value WORSE than threshold


 gi|18412221|ref|NP_565197.1|  p300/CBP acetyltransferase-related ...    40   0.005 

 gi|25148761|ref|NP_741151.1|  Putative nuclear protein, nematode ...    40   0.006 

 gi|27260988|dbj|BAC45105.1|  OJ1705_C03.27 [Oryza sativa (japonic...    39   0.017 

 gi|25148756|ref|NP_741152.1|  Putative nuclear protein, nematode ...    38   0.028 

 gi|15219327|ref|NP_173115.1|  expressed protein [Arabidopsis thal...    38   0.032 

 gi|17549180|ref|NP_522520.1|  PROBABLE SIGMA-54 INTERACTING TRANS...    37   0.038 

 gi|30421354|gb|AAP31290.1|  Hsc-70-interacting protein-like prote...    37   0.046 

 gi|102938|pir||A36329  hypothetical protein 1 - cabbage looper tr...    36   0.11  

 gi|1226167|gb|AAA92248.1|  ORF A span 522-1895; first start codon...    36   0.12  

 gi|15924675|ref|NP_372209.1|  chromosome replication initiation/m...    36   0.15  

 gi|21283357|ref|NP_646445.1|  chromosome replication initiation/m...    36   0.16  

 gi|22329083|ref|NP_680756.1|  expressed protein [Arabidopsis thal...    35   0.24  

 gi|15230656|ref|NP_187904.1|  CREB-binding protein -related [Arab...    35   0.24  

 gi|20149720|ref|NP_619589.1|  oxidized low density lipoprotein (l...    35   0.27  

 gi|19112182|ref|NP_595390.1|  putative transcriptional regulatory...    34   0.41  

 gi|7506661|pir||T16726  hypothetical protein R12B2.5 - Caenorhabd...    34   0.52  

 gi|21105779|gb|AAM34787.1|AF512558_1  HAC5 [Arabidopsis thaliana]       33   0.78  

 gi|15242286|ref|NP_200028.1|  zinc finger (C3HC4-type RING finger...    33   0.78  

 gi|7494984|pir||T25469  hypothetical protein B0507.8 - Caenorhabd...    33   0.82  

 gi|11342672|ref|NP_002461.1|  myosin, heavy polypeptide 3, skelet...    33   0.94  

 gi|3043372|sp|P11055|MYH3_HUMAN  Myosin heavy chain, fast skeleta...    33   0.96  


Alignments








>gi|22329593|ref|NP_173031.2|   expressed protein [Arabidopsis thaliana]
 gi|25513497|pir||C86292   F7H2.13 protein - Arabidopsis thaliana
 gi|8927658|gb|AAF82149.1|AC034256_13   ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene.
           [Arabidopsis thaliana]
 gi|12083256|gb|AAG48787.1|AF332424_1   unknown protein [Arabidopsis thaliana]
          Length = 179

 Score =  186 bits (472), Expect = 7e-47
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60
           MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ
Sbjct: 1   MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60

Query: 61  TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120
           TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS
Sbjct: 61  TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120

Query: 121 RQKNINALLDTLKKIVPHSGKEGID 145
           RQKNINALLDTLKKIVPHSGKEGID
Sbjct: 121 RQKNINALLDTLKKIVPHSGKEGID 145




 Score = 76.0 bits (186), Expect = 9e-14
 Identities = 34/72 (47%), Positives = 47/72 (65%)

Query: 3   TTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62
            TGDWRTQ P  SR + +N +++T  K +P    EG +EL +IAV  EE +FN+A NQ +
Sbjct: 108 NTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQED 167

Query: 63  YLRQICMKMLNM 74
           YL +I +KM  M
Sbjct: 168 YLGKISLKMRTM 179



>gi|15218294|ref|NP_173030.1|   expressed protein [Arabidopsis thaliana]
          Length = 1335

 Score =  159 bits (402), Expect = 8e-39
 Identities = 69/128 (53%), Positives = 82/128 (64%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           TGDWRTQ P  SR +IVNKIMET  K LPF  PEG NELR+IA RFEEK+F+ A NQT+Y
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123
           LR+I MKML METKSQNAAGSS+A           S+P N+  +  G   T Q Q  +  
Sbjct: 79  LRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPTNQGQLLPGSLSTNQSQAPQPL 138

Query: 124 NINALLDT 131
               + + 
Sbjct: 139 LSQTMQNN 146




 Score = 71.4 bits (174), Expect = 2e-12
 Identities = 31/48 (64%), Positives = 40/48 (83%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+
Sbjct: 8   PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN 55



>gi|24461867|gb|AAN62354.1|AF506028_23   CTV.22 [Poncirus trifoliata]
          Length = 1405

 Score =  148 bits (373), Expect = 2e-35
 Identities = 56/135 (41%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           TGDWRTQ    SR RIVNKIM+T  + LPF   +G NEL+KIA RFEEK++  AS+Q++Y
Sbjct: 34  TGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDY 93

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN------NEPAVNTGDWRTQQP 117
           LR+I +KML+ME+KSQNA  +S   +N       P   +      N+           Q 
Sbjct: 94  LRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPGSMQNQVHNQGQSLPIPLSANQS 153

Query: 118 QDSRQKNINALLDTL 132
           Q  +Q     + + +
Sbjct: 154 QVRQQLLSQNIQNNM 168




 Score = 67.1 bits (163), Expect = 4e-11
 Identities = 23/48 (47%), Positives = 36/48 (75%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           P+ P  E  ++TGDWRTQ   DSRQ+ +N ++DTLK+ +P SG++G++
Sbjct: 23  PTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLN 70



>gi|25511635|pir||B86292   F7H2.12 protein - Arabidopsis thaliana
 gi|8927657|gb|AAF82148.1|AC034256_12   EST gb|N38213 comes from this gene. [Arabidopsis thaliana]
          Length = 1366

 Score =  143 bits (362), Expect = 4e-34
 Identities = 69/159 (43%), Positives = 82/159 (51%), Gaps = 31/159 (19%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ--- 60
           TGDWRTQ P  SR +IVNKIMET  K LPF  PEG NELR+IA RFEEK+F+ A NQ   
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQRFV 78

Query: 61  ----------------------------TEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92
                                       T+YLR+I MKML METKSQNAAGSS+A     
Sbjct: 79  RQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTMETKSQNAAGSSAAIPAAN 138

Query: 93  PLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDT 131
                 S+P N+  +  G   T Q Q  +      + + 
Sbjct: 139 NGTSIDSIPTNQGQLLPGSLSTNQSQAPQPLLSQTMQNN 177




 Score = 71.7 bits (175), Expect = 2e-12
 Identities = 31/48 (64%), Positives = 40/48 (83%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+
Sbjct: 8   PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN 55



>gi|31753089|gb|AAH53889.1|   Unknown (protein for IMAGE:6151364) [Homo sapiens]
          Length = 1553

 Score =  139 bits (350), Expect = 9e-33
 Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 26/143 (18%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 568 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 624

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSS-----------------ADDNTPPLVPEPSVP 101
           N+ EY   +  K+  ++ K       +                   +       P+P + 
Sbjct: 625 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQPGMT 683

Query: 102 NNEPAVNTGDWRTQQPQDSRQKN 124
           +N P  +    R   P     + 
Sbjct: 684 SNGPLPDPSMIRGSVPNQMMPRI 706



>gi|21243753|ref|NP_643335.1|   transcriptional regulator [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109340|gb|AAM37871.1|   transcriptional regulator [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 534

 Score =  138 bits (349), Expect = 1e-32
 Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 11/131 (8%)

Query: 10  QFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM 69
           +        +   +M+       +  PE   EL ++ +R             + +++   
Sbjct: 319 RHGLDHGQVVTEVLMDALT---HYSWPENLQELERVVLRLAVMTAGRPIGSAD-IQRHAP 374

Query: 70  KMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALL 129
           ++L    K       ++       L  EP+ P         DW    P    Q+    L 
Sbjct: 375 RLLEGRVKGAQHDACATMSQ-PADLPAEPTPPGT-----PVDWIDGLPHRPGQRLAT-LH 427

Query: 130 DTLKKIVPHSG 140
           D L++ + H G
Sbjct: 428 DALRRALVHLG 438



>gi|2133462|pir||S60123   hypothetical protein R10E11.1 - Caenorhabditis elegans
          Length = 2027

 Score =  137 bits (346), Expect = 2e-32
 Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 3/105 (2%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLP--FIRPEGTNELRKIAVRFEEKLFNNASN 59
           D T +W  Q     R+ +V K+++    +     +      +L   A + E+++F +A++
Sbjct: 593 DCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFESAND 652

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104
           + EY   +  K+  ++ K      +S  +            P+NE
Sbjct: 653 REEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 696



>gi|17552710|ref|NP_499160.1|   CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans]
 gi|20455476|sp|P34545|CBP1_CAEEL   Protein cbp-1
 gi|25299632|pir||G88564   protein R10E11.1 [imported] - Caenorhabditis elegans
 gi|17645979|emb|CAD18875.1|   C. elegans CBP-1 protein (corresponding sequence R10E11.1b)
           [Caenorhabditis elegans]
          Length = 2056

 Score =  137 bits (346), Expect = 3e-32
 Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 3/105 (2%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLP--FIRPEGTNELRKIAVRFEEKLFNNASN 59
           D T +W  Q     R+ +V K+++    +     +      +L   A + E+++F +A++
Sbjct: 593 DCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFESAND 652

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104
           + EY   +  K+  ++ K      +S  +            P+NE
Sbjct: 653 REEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 696



>gi|17552708|ref|NP_499161.1|   CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans]
 gi|14530537|emb|CAA82353.2|   C. elegans CBP-1 protein (corresponding sequence R10E11.1a)
           [Caenorhabditis elegans]
          Length = 2045

 Score =  137 bits (345), Expect = 3e-32
 Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 3/105 (2%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLP--FIRPEGTNELRKIAVRFEEKLFNNASN 59
           D T +W  Q     R+ +V K+++    +     +      +L   A + E+++F +A++
Sbjct: 582 DCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFESAND 641

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104
           + EY   +  K+  ++ K      +S  +            P+NE
Sbjct: 642 REEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 685



>gi|4557557|ref|NP_001420.1|   E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens]
 gi|3024341|sp|Q09472|P300_HUMAN   E1A-associated protein p300
 gi|627657|pir||A54277   transcription adaptor protein p300 - human
 gi|495301|gb|AAA18639.1|   p300 protein
          Length = 2414

 Score =  136 bits (343), Expect = 5e-32
 Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 26/143 (18%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 568 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 624

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSS-----------------ADDNTPPLVPEPSVP 101
           N+ EY   +  K+  ++ K       +                   +       P+P + 
Sbjct: 625 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQPGMT 683

Query: 102 NNEPAVNTGDWRTQQPQDSRQKN 124
           +N P  +    R   P     + 
Sbjct: 684 SNGPLPDPSMIRGSVPNQMMPRI 706



>gi|28486616|ref|XP_283295.1|   similar to E1A-associated protein p300 [Mus musculus]
 gi|29244384|ref|NP_808489.1|   hypothetical protein A730011L11 [Mus musculus]
 gi|26335221|dbj|BAC31311.1|   unnamed protein product [Mus musculus]
          Length = 714

 Score =  132 bits (332), Expect = 1e-30
 Identities = 19/143 (13%), Positives = 41/143 (28%), Gaps = 26/143 (18%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 569 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 625

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADD-----------------NTPPLVPEPSVP 101
           N+ EY   +  K+  ++ K       +                      +        + 
Sbjct: 626 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAPGMGPVPMNTGSNMGQQPTGMT 684

Query: 102 NNEPAVNTGDWRTQQPQDSRQKN 124
            N P  +    R   P     + 
Sbjct: 685 TNGPVPDPSMIRGSVPNHMMPRM 707



>gi|27666550|ref|XP_235770.1|   similar to E1A-associated protein p300 [Rattus norvegicus]
          Length = 1605

 Score =  128 bits (322), Expect = 2e-29
 Identities = 20/156 (12%), Positives = 44/156 (28%), Gaps = 39/156 (25%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 197 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 253

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN----------------TPPLVPEPSVPN 102
           N+ EY   +  K+  ++ K       +                      P +  +P+   
Sbjct: 254 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPSAPGMVPVPMNTAPNMGQQPTGMT 312

Query: 103 NE--------------PAVNTGDWRTQQPQDSRQKN 124
            +              P  +    R   P     + 
Sbjct: 313 TKTKGYLTISVSTPDGPLPDPSMIRGSVPNQMMPRM 348



>gi|27663074|ref|XP_235502.1|   similar to E1A-associated protein p300 [Rattus norvegicus]
          Length = 2156

 Score =  124 bits (312), Expect = 2e-28
 Identities = 20/156 (12%), Positives = 44/156 (28%), Gaps = 39/156 (25%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 197 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 253

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN----------------TPPLVPEPSVPN 102
           N+ EY   +  K+  ++ K       +                      P +  +P+   
Sbjct: 254 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPSAPGMVPVPMNTAPNMGQQPTGMT 312

Query: 103 NE--------------PAVNTGDWRTQQPQDSRQKN 124
            +              P  +    R   P     + 
Sbjct: 313 TKTKGYLTISVSTPDGPLPDPSMIRGSVPNQMMPRM 348



>gi|24461860|gb|AAN62347.1|AF506028_14   CTV.20 [Poncirus trifoliata]
          Length = 3148

 Score =  122 bits (307), Expect = 8e-28
 Identities = 52/105 (49%), Positives = 71/105 (67%), Gaps = 7/105 (6%)

Query: 6   DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
           DWR      SR RIVNKIM+T  + LPF  PEG NEL++IA RFEEK+F +A++Q++YLR
Sbjct: 16  DWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQSDYLR 75

Query: 66  QICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110
           +I +KML+ME++SQNA+GS     N PP       P  +  ++T 
Sbjct: 76  KISLKMLSMESRSQNASGS-----NEPPHPGIK--PLTKEGLDTS 113




 Score = 74.8 bits (183), Expect = 2e-13
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 107 VNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           ++  DWR     DSRQ+ +N ++DTLK+ +P SG EG++
Sbjct: 12  LDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLN 50



>gi|631119|pir||S39162   transcription coactivator CREB-binding protein - human
          Length = 2440

 Score =  122 bits (306), Expect = 1e-27
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 589 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 645

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PA 106
           ++ EY   +  K+  ++ K       S                P    P +P  +   P 
Sbjct: 646 SRDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQSVRPP 704

Query: 107 VNTGDWRTQQPQDSR 121
                    + Q S+
Sbjct: 705 NGPLSLPVNRMQVSQ 719



>gi|4758056|ref|NP_004371.1|   CREB binding protein [Homo sapiens]
 gi|3023440|sp|Q92793|CBP_HUMAN   CREB-binding protein
 gi|2443859|gb|AAC51770.1|   CREB-binding protein
          Length = 2442

 Score =  122 bits (306), Expect = 1e-27
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 589 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 645

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PA 106
           ++ EY   +  K+  ++ K       S                P    P +P  +   P 
Sbjct: 646 SRDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPP 704

Query: 107 VNTGDWRTQQPQDSR 121
                    + Q S+
Sbjct: 705 NGPLSLPVNRMQVSQ 719



>gi|482238|pir||S41033   hypothetical protein K03H1.10 - Caenorhabditis elegans  (fragment)
          Length = 316

 Score =  122 bits (306), Expect = 1e-27
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 1/92 (1%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           T +W  Q  +  R+ IV K+++        +      +L   A + E+++F  A ++  Y
Sbjct: 160 TKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYARKVEKEVFETAIDRKNY 219

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLV 95
              +  K+  ++ K      +S  +       
Sbjct: 220 YHLLAEKIYEIQ-KELQEKKNSRLNQGAAQSP 250



>gi|4321116|gb|AAC51331.2|   CREB-binding protein [Homo sapiens]
          Length = 2442

 Score =  122 bits (306), Expect = 1e-27
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 589 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 645

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PA 106
           ++ EY   +  K+  ++ K       S                P    P +P  +   P 
Sbjct: 646 SRDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPP 704

Query: 107 VNTGDWRTQQPQDSR 121
                    + Q S+
Sbjct: 705 NGPLSLPVNRMQVSQ 719



>gi|17554044|ref|NP_499201.1|   TAZ zinc finger and KIX domain containing protein family member
           (36.7 kD) [Caenorhabditis elegans]
 gi|25395947|pir||D88569   protein K03H1.10 [imported] - Caenorhabditis elegans
 gi|3877003|emb|CAA82940.1|   Hypothetical protein K03H1.10 [Caenorhabditis elegans]
 gi|3878179|emb|CAA82665.1|   Hypothetical protein K03H1.10 [Caenorhabditis elegans]
          Length = 322

 Score =  121 bits (305), Expect = 1e-27
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 1/92 (1%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           T +W  Q  +  R+ IV K+++        +      +L   A + E+++F  A ++  Y
Sbjct: 166 TKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYARKVEKEVFETAIDRKNY 225

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLV 95
              +  K+  ++ K      +S  +       
Sbjct: 226 YHLLAEKIYEIQ-KELQEKKNSRLNQGAAQSP 256



>gi|28071313|dbj|BAC56002.1|   P0705A05.20 [Oryza sativa (japonica cultivar-group)]
          Length = 1359

 Score =  119 bits (300), Expect = 6e-27
 Identities = 51/93 (54%), Positives = 68/93 (73%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64
           GDWR+Q  S +R+RIVNKIM+T  K LP   PEG NEL+KIAVRFEEK++  A++Q++YL
Sbjct: 35  GDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYL 94

Query: 65  RQICMKMLNMETKSQNAAGSSSADDNTPPLVPE 97
           R+I +KML+METK+Q   G++    N  P   E
Sbjct: 95  RKISLKMLSMETKTQQNPGNAQVIQNQNPPGSE 127




 Score = 61.3 bits (148), Expect = 2e-09
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 91  TPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
                 +P+ P   PA+  GDWR+Q   ++R + +N ++DTLKK +P S  EG++
Sbjct: 18  AASGGIDPNAP--APALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLN 70



>gi|19547885|gb|AAL87531.1|   CREB-binding protein [Mus musculus]
 gi|19547887|gb|AAL87532.1|   CREB-binding protein [Mus musculus]
          Length = 2429

 Score =  119 bits (299), Expect = 8e-27
 Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 582 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 638

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PA 106
           ++ EY   +  K+  ++ K       S                     P +P  +   P 
Sbjct: 639 SRDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPASGAQPPVIPPAQSVRPP 697

Query: 107 VNTGDWRTQQPQDSR 121
                    + Q S+
Sbjct: 698 NGPLPLPVNRMQVSQ 712



>gi|737920|prf||1923401A   protein CBP
          Length = 2441

 Score =  119 bits (298), Expect = 1e-26
 Identities = 20/135 (14%), Positives = 43/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W  +     RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 588 RKGWHERVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 644

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PA 106
           ++ EY   +  K+  ++ K       +                     P +P  +   P 
Sbjct: 645 SRDEYYHLLAEKIYKIQ-KELEEKRRTRLHKQGILGNQPALPASGAQPPVIPPAQSVRPP 703

Query: 107 VNTGDWRTQQPQDSR 121
                    + Q S+
Sbjct: 704 NGPLPLPVNRMQVSQ 718



>gi|547239|gb|AAB31182.1|   p300=transcription coactivator {N-terminal} [mice, Peptide Partial,
           688 aa]
          Length = 688

 Score =  118 bits (297), Expect = 1e-26
 Identities = 18/119 (15%), Positives = 39/119 (32%), Gaps = 15/119 (12%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 569 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 625

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSAD------DNTPPLVPEPSVPNNEPAVNTGD 111
           N+ EY   +  K+  ++ K       +         +         +  +N     TG 
Sbjct: 626 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAPGMGPVPMNTGSNMGQQPTGM 683



>gi|1345703|sp|P45481|CBP_MOUSE   CREB-binding protein
 gi|481698|pir||S39161   CREB-binding protein - mouse
 gi|435855|gb|AAB28651.1|   CREB-binding protein; CBP [Mus sp.]
          Length = 2441

 Score =  118 bits (297), Expect = 1e-26
 Identities = 20/135 (14%), Positives = 42/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 588 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 644

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PA 106
           ++ EY   +  K+  ++ K       +                     P +P  +   P 
Sbjct: 645 SRDEYYHLLAEKIYKIQ-KELEEKRRTRLHKQGILGNQPALPASGAQPPVIPPAQSVRPP 703

Query: 107 VNTGDWRTQQPQDSR 121
                    + Q S+
Sbjct: 704 NGPLPLPVNRMQVSQ 718



>gi|2996629|gb|AAC08447.1|   CBP [Homo sapiens]
          Length = 555

 Score =  116 bits (292), Expect = 5e-26
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 323 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 379

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PA 106
           ++ EY   +  K+  ++ K       S                P    P +P  +   P 
Sbjct: 380 SRDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPP 438

Query: 107 VNTGDWRTQQPQDSR 121
                    + Q S+
Sbjct: 439 NGPLSLPVNRMQVSQ 453



>gi|21307831|gb|AAL54859.1|   CREB-binding protein [Aplysia californica]
          Length = 2245

 Score =  115 bits (289), Expect = 1e-25
 Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 14/112 (12%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
             DW  Q     R+ +V+K+++      P        +     L   A + E  ++ +A+
Sbjct: 502 RKDWHAQVTQDLRNHLVHKLVQAI---FPTPDQATLRDSRMKNLVAYARKVEGDMYESAN 558

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSAD-DNTPPLVPEPSVPNNEPAVNT 109
           N+ +Y   +  K+  ++ K             N P       VP  +  ++ 
Sbjct: 559 NRGQYYHLLAEKIYKIQ-KELEEKRIQRMKVQNAPN----AQVPGMQGQIHP 605



>gi|27881767|gb|AAH44677.1|   Similar to CREB binding protein (Rubinstein-Taybi syndrome)
           [Xenopus laevis]
          Length = 1047

 Score =  113 bits (284), Expect = 4e-25
 Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 10/112 (8%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 578 RKAWHEHVTQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 634

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSAD-DNTPPLVPEPSVPNNEPAVNT 109
           ++ EY   +  K+  ++ K       S                P  +P   T
Sbjct: 635 SRDEYYHFLAEKIYKIQ-KELEEKRRSRLQKQGIMSSQAPLQAPGAQPTALT 685



>gi|17508323|ref|NP_493339.1|   KIX domain containing protein family member (80.3 kD)
           [Caenorhabditis elegans]
 gi|7505888|pir||T23651   hypothetical protein M01E5.6 - Caenorhabditis elegans
 gi|3878635|emb|CAB07643.1|   Hypothetical protein M01E5.6 [Caenorhabditis elegans]
 gi|3879438|emb|CAB03290.1|   Hypothetical protein M01E5.6 [Caenorhabditis elegans]
          Length = 702

 Score =  109 bits (274), Expect = 6e-24
 Identities = 15/105 (14%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLP---FIRPEGTNELRKIAVRFEEKLFNNAS 58
           +T+ +W        R+ +V K+++    ++     +  E   +L   A + E ++   ++
Sbjct: 597 NTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASN 653

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNN 103
           ++ EY R + + +  +  K+      ++  ++  P      +  N
Sbjct: 654 DRDEYYRLMQLTVDQILKKTLKKDQRATEHNHQQPTQSSDELAKN 698



>gi|31204369|ref|XP_311133.1|   ENSANGP00000004748 [Anopheles gambiae]
 gi|30178093|gb|EAA06516.2|   ENSANGP00000004748 [Anopheles gambiae str. PEST]
          Length = 2572

 Score =  107 bits (268), Expect = 3e-23
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
           T DW        R+ +V+K+++      P   P    +     L   A + E  ++  A+
Sbjct: 742 TKDWHHSVTPDLRNHLVHKLVQAI---FPSPDPSAMFDKRMYNLVAYAKKVEGDMYEMAN 798

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSS 86
           +++EY   +  K+  ++ K         
Sbjct: 799 SRSEYYHLLAEKIYKIQ-KELEEKRQKR 825



>gi|7511830|pir||T13828   CREB-binding protein homolog - fruit fly (Drosophila melanogaster)
 gi|1916930|gb|AAB53050.1|   CREB-binding protein homolog [Drosophila melanogaster]
          Length = 3190

 Score =  106 bits (266), Expect = 5e-23
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 2    DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNN 56
            D   DWR    +  R+ +V+K+++      P   P    +     L   A + E+ ++  
Sbjct: 938  DNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994

Query: 57   ASNQTEYLRQICMKMLNMETKSQNAAG 83
            A +++EY   +  K+  ++ K      
Sbjct: 995  AKSRSEYYHLLAEKIYKIQ-KELEEKR 1020



>gi|17552402|ref|NP_497144.1|   TAZ zinc finger family member [Caenorhabditis elegans]
 gi|7496697|pir||T33579   hypothetical protein C29F9.6 - Caenorhabditis elegans
 gi|3790688|gb|AAC68748.1|   Hypothetical protein C29F9.6 [Caenorhabditis elegans]
          Length = 228

 Score =  105 bits (262), Expect = 1e-22
 Identities = 16/97 (16%), Positives = 39/97 (40%), Gaps = 2/97 (2%)

Query: 3   TTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62
           T+  W ++ P   R  ++ +I +  +       P    ++++ A   E ++F  A ++ E
Sbjct: 116 TSQPWHSEVPKTDREAVIERISKHIMLHPQRFEP--IWKIKEDARAAELQIFEAAGSRDE 173

Query: 63  YLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPS 99
           Y R +  +    + K+    G  +  +       +P 
Sbjct: 174 YYRMVEERAPREQDKAPEGPGQEAQKEEKGAGEEDPD 210



>gi|24640865|ref|NP_524642.2|   nejire CG15319-PB [Drosophila melanogaster]
 gi|22833041|gb|AAF46516.2|   CG15319-PB [Drosophila melanogaster]
          Length = 3276

 Score =  105 bits (262), Expect = 2e-22
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 2    DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNN 56
            D   DWR    +  R+ +V+K+++      P   P    +     L   A + E+ ++  
Sbjct: 938  DNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994

Query: 57   ASNQTEYLRQICMKMLNMETKSQNAAG 83
            A +++EY   +  K+  ++ K      
Sbjct: 995  AKSRSEYYHLLAEKIYKIQ-KELEEKR 1020



>gi|4139873|pdb|1KDX|A   Chain A, Kix Domain Of Mouse Cbp (Creb Binding Protein) In
          Complex With Phosphorylated Kinase Inducible Domain
          (Pkid) Of Rat Creb (Cyclic Amp Response Element Binding
          Protein), Nmr 17 Structures
          Length = 81

 Score =  101 bits (252), Expect = 2e-21
 Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 9/83 (10%)

Query: 4  TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
             W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 3  RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 59

Query: 59 NQTEYLRQICMKMLNMETKSQNA 81
          ++ EY   +  K+  ++ K    
Sbjct: 60 SRDEYYHLLAEKIYKIQ-KELEE 81



>gi|17567279|ref|NP_509376.1|   KIX domain containing protein family member [Caenorhabditis
           elegans]
 gi|7499689|pir||T16139   hypothetical protein F22F1.3 - Caenorhabditis elegans
 gi|1118044|gb|AAA83283.1|   Hypothetical protein F22F1.3 [Caenorhabditis elegans]
          Length = 295

 Score = 89.9 bits (222), Expect = 7e-18
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 15  SRSRIVNKIMETQLKQLP--FIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKML 72
            R  ++ KI+   + +            EL++ A   E+K F     + EY  ++   +L
Sbjct: 70  LRQYMITKIVREAVPRPNSDAKNDARMIELKEYATFMEKKSFEKVQTKDEYYAELARIIL 129

Query: 73  NMETKSQNAAGSSSADDNTPPLVP 96
           +M+   Q+    S  D  +     
Sbjct: 130 SMQKHLQSRPKGSYEDPYSNIPPS 153



>gi|27260984|dbj|BAC45101.1|   OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)]
          Length = 414

 Score = 87.5 bits (216), Expect = 3e-17
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 6  DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
          DWRT+     R R+   I+ +   +L         +L+K+A R EE+++  A +  +YLR
Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71

Query: 66 QICM 69
          +I +
Sbjct: 72 RISL 75



>gi|7493813|pir||T18235   transcription activator GAL11 homolog - yeast (Candida albicans)
 gi|3859719|emb|CAA21993.1|   possible regulatory protein [Candida albicans]
          Length = 1145

 Score = 86.0 bits (212), Expect = 8e-17
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 7   WRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYLR 65
           WR  +    R ++V  I+ T  + L    P      L K+A  FE+ ++  ++++ +YLR
Sbjct: 23  WRAMYSGEERQKVVQIIINTLTE-LHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLR 81

Query: 66  QICMKMLNMETKSQNAAGSSSADDNT 91
            I MK+  +  + Q  A +     N 
Sbjct: 82  AIKMKVHQLRVQKQQIAANQGGQINP 107



>gi|23127315|ref|ZP_00109188.1|   hypothetical protein [Nostoc punctiforme]
          Length = 469

 Score = 76.0 bits (186), Expect = 1e-13
 Identities = 10/71 (14%), Positives = 23/71 (32%), Gaps = 2/71 (2%)

Query: 34  IRPEGTNELRK-IAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92
                   + + I +   +++F  A +Q+E LR    +   +           +A +   
Sbjct: 176 TWQYTLKAITRTIVLSLPQEVFERAIDQSEALRTHVEQ-FRVRLSQPQTPQGEAAIELAA 234

Query: 93  PLVPEPSVPNN 103
               E  +P  
Sbjct: 235 NHPQEAELPGT 245



>gi|19074594|ref|NP_586100.1|   MADS domain [Encephalitozoon cuniculi]
 gi|19069236|emb|CAD25704.1|   MADS domain [Encephalitozoon cuniculi]
          Length = 776

 Score = 71.0 bits (173), Expect = 3e-12
 Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 22/115 (19%)

Query: 10  QFPSASRSRIVNKIMETQLK--QLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQI 67
                 R +++ K+     +    P   P    E    A+R E++++  + ++ EYLR +
Sbjct: 1   MLSQEERKQMILKLFVALKESNIFPGYTPVQIKEA---AIRAEQRIYEESGSKEEYLRGM 57

Query: 68  CMKMLNMET------------KSQNAAGSSSADDNTP-----PLVPEPSVPNNEP 105
             +   +E             KS      S                EP     + 
Sbjct: 58  DERFQRIERVVSNRSRADGRGKSTQEQMGSYEHARPQFQGFRNGSEEPQDSTKQG 112



>gi|15226772|ref|NP_178842.1|   hypothetical protein [Arabidopsis thaliana]
 gi|25411357|pir||E84491   hypothetical protein At2g10440 [imported] - Arabidopsis thaliana
 gi|4733973|gb|AAD28655.1|   hypothetical protein [Arabidopsis thaliana]
          Length = 935

 Score = 69.1 bits (168), Expect = 1e-11
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 2  DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61
          +   DWR+Q     R ++++KI+E   ++         N+   IA +FEE  ++ A+++T
Sbjct: 20 NNRIDWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---IASKFEENFYSIATDKT 76



>gi|27260985|dbj|BAC45102.1|   OJ1705_C03.24 [Oryza sativa (japonica cultivar-group)]
          Length = 87

 Score = 47.1 bits (111), Expect = 4e-05
 Identities = 9/41 (21%), Positives = 19/41 (46%)

Query: 20 VNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60
          + + M     +L         +L+K+A R EE+++  A + 
Sbjct: 35 IGQTMPILQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDF 75



>gi|17552400|ref|NP_497145.1|   TAZ zinc finger family member [Caenorhabditis elegans]
 gi|7496696|pir||T33580   hypothetical protein C29F9.5 - Caenorhabditis elegans
 gi|3790687|gb|AAC68747.1|   Hypothetical protein C29F9.5 [Caenorhabditis elegans]
          Length = 226

 Score = 43.2 bits (101), Expect = 7e-04
 Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 7   WRTQFPSASRSRIVNKIMETQLK--QLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64
           W  + P   RS ++ KI +  +   +   +     +  ++ +   E ++F+ A     Y 
Sbjct: 118 WHLEVPKTYRSELIEKIYKGIMSNVKPGTLSEAQMDTWKEYSRSAELQIFDTAQKLEAYY 177

Query: 65  RQICMKMLNME 75
                K+   +
Sbjct: 178 HMAREKVCRYQ 188



>gi|17559186|ref|NP_507512.1|   Predicted CDS, putative cytoplasmic protein, nematode specific
           [Caenorhabditis elegans]
 gi|7498278|pir||T20398   hypothetical protein E01B7.2 - Caenorhabditis elegans
 gi|5824421|emb|CAB54214.1|   Hypothetical protein E01B7.2 [Caenorhabditis elegans]
          Length = 230

 Score = 42.1 bits (98), Expect = 0.001
 Identities = 16/70 (22%), Positives = 27/70 (38%)

Query: 6   DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
           DW+       R + V KI+ T         P   +EL   +   E   ++ A N+  Y  
Sbjct: 56  DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 115

Query: 66  QICMKMLNME 75
            I   + +M+
Sbjct: 116 GIESMIQSMQ 125



>gi|25396635|pir||E89403   protein C06H5.4 [imported] - Caenorhabditis elegans
          Length = 337

 Score = 41.7 bits (97), Expect = 0.002
 Identities = 16/70 (22%), Positives = 27/70 (38%)

Query: 6   DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
           DW+       R + V KI+ T         P   +EL   +   E   ++ A N+  Y  
Sbjct: 177 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 236

Query: 66  QICMKMLNME 75
            I   + +M+
Sbjct: 237 GIESMIQSMQ 246



>gi|7487910|pir||T01055   hypothetical protein YUP8H12R.38 - Arabidopsis thaliana
 gi|3152587|gb|AAC17068.1|   Similar to CREB-binding protein homolog gb|U88570 from D.
           melanogaster and contains similarity to
           callus-associated protein gb|U01961 from Nicotiana
           tabacum.  EST gb|W43427 comes from this gene.
           [Arabidopsis thaliana]
          Length = 1516

 Score = 40.9 bits (95), Expect = 0.004
 Identities = 16/104 (15%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 15  SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR--QICMKM 71
            R  +  +I     ++ P    E +  +   +A R EE LF  A+ + +Y+    +  ++
Sbjct: 51  LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110

Query: 72  LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQ 115
            ++    Q    +    +++      P+        N     T 
Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNPNLMITS 154



>gi|18412221|ref|NP_565197.1|   p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana]
 gi|12597461|gb|AAG60059.1|   p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana]
          Length = 1654

 Score = 40.2 bits (93), Expect = 0.005
 Identities = 16/104 (15%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 15  SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR--QICMKM 71
            R  +  +I     ++ P    E +  +   +A R EE LF  A+ + +Y+    +  ++
Sbjct: 51  LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110

Query: 72  LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQ 115
            ++    Q    +    +++      P+        N     T 
Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNPNLMITS 154



>gi|25148761|ref|NP_741151.1|   Putative nuclear protein, nematode specific [Caenorhabditis
           elegans]
 gi|21450526|gb|AAM54164.1|U00066_6   Hypothetical protein R12B2.5b [Caenorhabditis elegans]
          Length = 777

 Score = 40.2 bits (93), Expect = 0.006
 Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 19/128 (14%)

Query: 6   DWRTQFPSASRSRIVNKIMETQ------LKQLPFIRPEGTNELRKIAVRFEEKLFNNASN 59
           DW +      R  ++ ++             LP             A + EE +F    +
Sbjct: 5   DWPS---PKFREHVIQRLEPELARNRQNAPNLPVPGD---------ARQVEEYVFAKCMS 52

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD 119
           + EY+R I   +  +   S++AA  S     +    P  +   N PA  T  +R   P D
Sbjct: 53  KDEYMRTIAKVINAINCNSKSAAVPSVLQP-SQFHSPPCTTAGNTPAGGTPGYRAPVPPD 111

Query: 120 SRQKNINA 127
            +  +  A
Sbjct: 112 PQPTSAQA 119



>gi|27260988|dbj|BAC45105.1|   OJ1705_C03.27 [Oryza sativa (japonica cultivar-group)]
          Length = 194

 Score = 38.6 bits (89), Expect = 0.017
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 6  DWRTQFPSASRSRIVNKIMETQLK 29
          DWRT+     R R+ + I++    
Sbjct: 12 DWRTRLGQDIRDRVTHDILQASTP 35



>gi|25148756|ref|NP_741152.1|   Putative nuclear protein, nematode specific [Caenorhabditis
           elegans]
 gi|21363104|sp|Q21955|YNL5_CAEEL   Hypothetical protein R12B2.5 in chromosome III
 gi|17976542|gb|AAA50743.3|   Hypothetical protein R12B2.5a [Caenorhabditis elegans]
          Length = 780

 Score = 37.9 bits (87), Expect = 0.028
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 20/130 (15%)

Query: 6   DWRTQFPSASRSRIVNKIMETQ------LKQLPFIRPEGTNELRKIAVRFEEKLFNNASN 59
           DW +      R  ++ ++             LP             A + EE +F    +
Sbjct: 5   DWPS---PKFREHVIQRLEPELARNRQNAPNLPVPGD---------ARQVEEYVFAKCMS 52

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVP--NNEPAVNTGDWRTQQP 117
           + EY+R I   +  +   S++AA  S    +     P  +     N PA  T  +R   P
Sbjct: 53  KDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTAALLGNTPAGGTPGYRAPVP 112

Query: 118 QDSRQKNINA 127
            D +  +  A
Sbjct: 113 PDPQPTSAQA 122



>gi|15219327|ref|NP_173115.1|   expressed protein [Arabidopsis thaliana]
          Length = 1706

 Score = 37.9 bits (87), Expect = 0.032
 Identities = 14/98 (14%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 15  SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLRQ--ICMKM 71
            R  +   +     ++ P      +  +   +A R EE LF  A  + +Y+ +  +  ++
Sbjct: 73  LRQYMQTLVFNMLQQRQPSPADAASKAKYMDVARRLEEGLFKMAVTKEDYMNRSTLESRI 132

Query: 72  LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNT 109
            ++    Q    +    +++      P+   ++ A N 
Sbjct: 133 TSLIKGRQINNYNQRHANSSSVGTMIPTPGLSQTAGNP 170



>gi|17549180|ref|NP_522520.1|   PROBABLE SIGMA-54 INTERACTING TRANSCRIPTION REGULATOR PROTEIN
           [Ralstonia solanacearum]
 gi|17431432|emb|CAD18110.1|   PROBABLE SIGMA-54 INTERACTING TRANSCRIPTION REGULATOR PROTEIN
           [Ralstonia solanacearum]
          Length = 510

 Score = 37.5 bits (86), Expect = 0.038
 Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 8/68 (11%)

Query: 33  FIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92
           +  P    EL  +  R   K+ +  +++ +        ++ +ET   +    + A  +  
Sbjct: 396 YPWPGNVRELEHVVSRAALKMLSRGASRDD--------IVTLETGLLDLDAQAVAPPSPA 447

Query: 93  PLVPEPSV 100
            L PE S 
Sbjct: 448 GLPPEASP 455



>gi|30421354|gb|AAP31290.1|   Hsc-70-interacting protein-like protein [Drosophila simulans]
 gi|30421356|gb|AAP31291.1|   Hsc-70-interacting protein-like protein [Drosophila simulans]
          Length = 363

 Score = 37.1 bits (85), Expect = 0.046
 Identities = 20/134 (14%), Positives = 36/134 (26%), Gaps = 24/134 (17%)

Query: 21  NKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQN 80
           + + +           E   E+   A + E+        + +  R+   + +    + Q 
Sbjct: 208 HDLRQACKLDFDEETDEWLKEVTPNAKKIEQH-------RVKQERRQAERKIKERQRDQR 260

Query: 81  AAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS------RQKNIN-------- 126
            A       N          P   P   T        QD       +    N        
Sbjct: 261 RARKEQEKHNVSSGGSSGEFPPGAPGNITISDILGFMQDPEASAAIQDILSNPGNITKYA 320

Query: 127 ---ALLDTLKKIVP 137
               ++D LKK+VP
Sbjct: 321 SNPKIIDLLKKMVP 334



>gi|102938|pir||A36329   hypothetical protein 1 - cabbage looper transposon TED  (fragment)
          Length = 457

 Score = 35.9 bits (82), Expect = 0.11
 Identities = 14/118 (11%), Positives = 32/118 (27%), Gaps = 3/118 (2%)

Query: 17  SRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQI-CMKMLNME 75
              V  + E    ++  +RPE   +  +        ++     + E  R     KML + 
Sbjct: 200 QAFVRGLKEPLGSRIRCMRPETIEKALEYVQEELNVIY--LQQRNESSRAHSSPKMLPIP 257

Query: 76  TKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLK 133
            +S     ++      P       +           ++   P     +        L+
Sbjct: 258 QQSPVTPFNTLGIHRPPVPNWPVPMGQRGNQPPPQPFKFNVPNQYHNRMPTKTQQMLR 315



>gi|1226167|gb|AAA92248.1|   ORF A span 522-1895; first start codon at 663
          Length = 410

 Score = 35.9 bits (82), Expect = 0.12
 Identities = 14/118 (11%), Positives = 32/118 (27%), Gaps = 3/118 (2%)

Query: 17  SRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQI-CMKMLNME 75
              V  + E    ++  +RPE   +  +        ++     + E  R     KML + 
Sbjct: 153 QAFVRGLKEPLGSRIRCMRPETIEKALEYVQEELNVIY--LQQRNESSRAHSSPKMLPIP 210

Query: 76  TKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLK 133
            +S     ++      P       +           ++   P     +        L+
Sbjct: 211 QQSPVTPFNTLGIHRPPVPNWPVPMGQRGNQPPPQPFKFNVPNQYHNRMPTKTQQMLR 268



>gi|15924675|ref|NP_372209.1|   chromosome replication initiation/membrane attachment protein
           [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927263|ref|NP_374796.1|   chromosome replication initiation/membrane attachment protein
           [Staphylococcus aureus subsp. aureus N315]
 gi|25506247|pir||B89952   hypothetical protein dnaB [imported] - Staphylococcus aureus
           (strain N315)
 gi|13701481|dbj|BAB42775.1|   chromosome replication initiation/membrane attachment protein
           [Staphylococcus aureus subsp. aureus N315]
 gi|14247457|dbj|BAB57847.1|   chromosome replication initiation/membrane attachment protein
           [Staphylococcus aureus subsp. aureus Mu50]
          Length = 466

 Score = 35.5 bits (81), Expect = 0.15
 Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 7/86 (8%)

Query: 47  VRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPS----VPN 102
           + FEE        ++ YL +   +M  ++ KS   + S+       P          +  
Sbjct: 252 LSFEEM---RKQARSYYLMEHENQMPKLQVKSPATSSSTGKSSEVNPKPQSDEWFELLEQ 308

Query: 103 NEPAVNTGDWRTQQPQDSRQKNINAL 128
             P      W   +P  S++  +  L
Sbjct: 309 TSPIDMLASWSESEPTISQKTMVEEL 334



>gi|21283357|ref|NP_646445.1|   chromosome replication initiation/membrane attachment protein
           [Staphylococcus aureus subsp. aureus MW2]
 gi|21204797|dbj|BAB95493.1|   chromosome replication initiation/membrane attachment protein
           [Staphylococcus aureus subsp. aureus MW2]
          Length = 466

 Score = 35.5 bits (81), Expect = 0.16
 Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 7/86 (8%)

Query: 47  VRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPS----VPN 102
           + FEE        ++ YL +   +M  ++ KS   + S+       P          +  
Sbjct: 252 LSFEEM---RKQARSYYLMEHENQMPKLQVKSPATSSSTGKSSEVNPKPQSDEWFELLEQ 308

Query: 103 NEPAVNTGDWRTQQPQDSRQKNINAL 128
             P      W   +P  S++  +  L
Sbjct: 309 TSPIDMLASWSESEPTISQKTMVEEL 334



>gi|22329083|ref|NP_680756.1|   expressed protein [Arabidopsis thaliana]
 gi|28392894|gb|AAO41883.1|   unknown protein [Arabidopsis thaliana]
 gi|28827750|gb|AAO50719.1|   unknown protein [Arabidopsis thaliana]
          Length = 238

 Score = 34.8 bits (79), Expect = 0.24
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 12/72 (16%)

Query: 7  WRTQFPSASRSRIVNKIMETQLK------QLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60
          W +      R  ++ +I     +      +      E   +L  + +R EE +++ A+++
Sbjct: 16 WHSDRHQPMRGLLIQEIFRIVCEIHSQSTRKNTEWQE---KLPVVVLRAEEIMYSKANSE 72

Query: 61 TEYLRQICMKML 72
           EY   + MK L
Sbjct: 73 AEY---MDMKTL 81



>gi|15230656|ref|NP_187904.1|   CREB-binding protein -related [Arabidopsis thaliana]
 gi|15795129|dbj|BAB02507.1|   CREB-binding protein-like [Arabidopsis thaliana]
          Length = 1670

 Score = 34.8 bits (79), Expect = 0.24
 Identities = 11/57 (19%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 9  TQFPSASRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYL 64
          +Q     R  ++N+      ++ P    + +  +L ++A R E  ++  A+++ +YL
Sbjct: 37 SQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYL 93



>gi|20149720|ref|NP_619589.1|   oxidized low density lipoprotein (lectin-like) receptor 1; oxidised
           low density lipoprotein (lectin-like) receptor 1 [Mus
           musculus]
 gi|12006986|gb|AAG44998.1|AF303744_1   oxidized LDL receptor [Mus musculus]
          Length = 363

 Score = 34.8 bits (79), Expect = 0.27
 Identities = 22/143 (15%), Positives = 48/143 (33%), Gaps = 15/143 (10%)

Query: 12  PSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKM 71
              S+  +  KI +T  ++L     E    L+K     +E L   A++  E  R++  K+
Sbjct: 94  SQESKKELKGKI-DTLTQKLNEKSKEQEELLQKN-QNLQEALQRAANSSEESQRELKGKI 151

Query: 72  LNMETKSQNAAG-SSSADDNTPPLVPEPSVPNN---------EPAVNTGDWRTQQPQDSR 121
             +  K    +            L        N         +  ++T   +  +    +
Sbjct: 152 DTITRKLDEKSKEQEELLQMIQNLQEALQRAANSSEESQRELKGKIDTLTLKLNEKSKEQ 211

Query: 122 QKNINA---LLDTLKKIVPHSGK 141
           ++ +     L + L++    SG 
Sbjct: 212 EELLQKNQNLQEALQRAANFSGP 234



>gi|19112182|ref|NP_595390.1|   putative transcriptional regulatory protein [Schizosaccharomyces
           pombe]
 gi|7573208|emb|CAB87377.1|   SPBP35G2.15 [Schizosaccharomyces pombe]
          Length = 653

 Score = 34.0 bits (77), Expect = 0.41
 Identities = 20/99 (20%), Positives = 36/99 (36%), Gaps = 7/99 (7%)

Query: 42  LRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADD------NTPPLV 95
           L  +A+ FE + F+ AS++ EYL     K   +  + ++   ++          N   + 
Sbjct: 41  LMNMALSFERQAFDGASSKNEYLTTCGKKTAQLRDQIRDTLQATQMKQMPSVYNNAGNVG 100

Query: 96  PEPSVPNNEPAVNT-GDWRTQQPQDSRQKNINALLDTLK 133
             P+   N  A N     R Q      Q  +      +K
Sbjct: 101 ALPTAGPNRLANNPRVMPRLQNQNVPMQAGMQQFARNMK 139



>gi|7506661|pir||T16726   hypothetical protein R12B2.5 - Caenorhabditis elegans
          Length = 760

 Score = 33.6 bits (76), Expect = 0.52
 Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 22/121 (18%)

Query: 6   DWRTQFPSASRSRIVNKIMETQ------LKQLPFIRPEGTNELRKIAVRFEEKLFNNASN 59
           DW +      R  ++ ++             LP             A + EE +F    +
Sbjct: 5   DWPS---PKFREHVIQRLEPELARNRQNAPNLPVPGD---------ARQVEEYVFAKCMS 52

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADD----NTPPLVPEPSVPNNEPAVNTGDWRTQ 115
           + EY+R I   +  +   S++AA  S        + P    +P   + +         T 
Sbjct: 53  KDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTADPQPTSAQARNPPVTVATT 112

Query: 116 Q 116
           Q
Sbjct: 113 Q 113



>gi|21105779|gb|AAM34787.1|AF512558_1   HAC5 [Arabidopsis thaliana]
          Length = 453

 Score = 33.2 bits (75), Expect = 0.78
 Identities = 11/57 (19%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 9  TQFPSASRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYL 64
          +Q     R  ++N+      ++ P    + +  +L ++A R E  ++  A+++ +YL
Sbjct: 6  SQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYL 62



>gi|15242286|ref|NP_200028.1|   zinc finger (C3HC4-type RING finger) protein family [Arabidopsis
           thaliana]
 gi|8885528|dbj|BAA97458.1|   gene_id:F17P19.5~unknown protein [Arabidopsis thaliana]
          Length = 200

 Score = 33.2 bits (75), Expect = 0.78
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 6/97 (6%)

Query: 23  IMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAA 82
           I E     L F     T   + IA++ ++     +    E       KML ++   + A 
Sbjct: 10  IDEAIALDLQFDDLYLTINDQYIALKIKQNEEAMSIQADEDYA----KMLQLQEDEETAK 65

Query: 83  GSSSADDNTPPLVPEPSVPNNE--PAVNTGDWRTQQP 117
              + ++N P +        +     +N GD R  QP
Sbjct: 66  TLHAMEENPPNIPQSDVPSTSRDTSGLNDGDRRQDQP 102



>gi|7494984|pir||T25469   hypothetical protein B0507.8 - Caenorhabditis elegans
          Length = 772

 Score = 32.8 bits (74), Expect = 0.82
 Identities = 9/61 (14%), Positives = 23/61 (37%)

Query: 21  NKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQN 80
            KI +    ++   R     +  +  ++  + +     NQ E L+++  K +  + K   
Sbjct: 503 EKIRQEMCNKIREERNAEQKKFNEEVLKLNQGIHEIKINQEEKLQKMDEKRIEEQKKRLE 562

Query: 81  A 81
            
Sbjct: 563 K 563



>gi|11342672|ref|NP_002461.1|   myosin, heavy polypeptide 3, skeletal muscle, embryonic [Homo
            sapiens]
 gi|88201|pir||S04090   myosin heavy chain 3, skeletal muscle, embryonic - human
 gi|34844|emb|CAA32167.1|   embryonic myosin heavy chain (AA 1 - 1940) [Homo sapiens]
          Length = 1940

 Score = 32.8 bits (74), Expect = 0.94
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 32   PFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNT 91
                 E    LRK   R +E  + +  ++   LR   + +  ++ K ++    +   D  
Sbjct: 1831 QKKNTESVKGLRKYERRVKELTYQSEEDRKNVLRLQDL-VDKLQVKVKSYKRQAEEADEQ 1889

Query: 92   PP 93
              
Sbjct: 1890 AN 1891



>gi|3043372|sp|P11055|MYH3_HUMAN   Myosin heavy chain, fast skeletal muscle, embryonic (Muscle embryonic
            myosin heavy chain) (SMHCE)
          Length = 1940

 Score = 32.8 bits (74), Expect = 0.96
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 32   PFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNT 91
                 E    LRK   R +E  + +  ++   LR   + +  ++ K ++    +   D  
Sbjct: 1831 QKKNTESVKGLRKYERRVKELTYQSEEDRKNVLRLQDL-VDKLQVKVKSYKRQAEEADEQ 1889

Query: 92   PP 93
              
Sbjct: 1890 AN 1891






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Jun 26, 2003  1:47 AM
  Number of letters in database: 468,778,868
  Number of sequences in database:  1,459,938
  
Lambda     K      H
   0.318    0.163    0.422 

Gapped
Lambda     K      H
   0.267   0.0499    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,547,293
Number of Sequences: 1459938
Number of extensions: 6365586
Number of successful extensions: 54673
Number of sequences better than  1.0: 100
Number of HSP's better than  1.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 205
Number of HSP's that attempted gapping in prelim test: 51765
Number of HSP's gapped (non-prelim): 1718
length of query: 145
length of database: 468,778,868
effective HSP length: 121
effective length of query: 24
effective length of database: 292,126,370
effective search space: 7011032880
effective search space used: 7011032880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)