BLASTP 2.2.6 [Apr-09-2003]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1056973345-029055-19961

Query= At1g15790 [1-145]
         (145 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,459,938 sequences; 468,778,868 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs



Results of PSI-Blast iteration 5

Skip to the first new sequence

Legend:
 - means that the alignment score was below the threshold on the previous iteration 
 - means that the alignment was checked on the previous iteration 


Hit list size 
Sequences with E-value BETTER than threshold
Related Structures
                                                                     Score    E
Sequences producing significant alignments:                          (bits) Value


 gi|22329593|ref|NP_173031.2|  expressed protein [Arabidopsis thal...   193   5e-49 

 gi|15218294|ref|NP_173030.1|  expressed protein [Arabidopsis thal...   155   1e-37 

 gi|24461867|gb|AAN62354.1|AF506028_23  CTV.22 [Poncirus trifoliata]    149   6e-36 

 gi|21243753|ref|NP_643335.1|  transcriptional regulator [Xanthomo...   143   5e-34 

 gi|25511635|pir||B86292  F7H2.12 protein - Arabidopsis thaliana >...   139   6e-33 

 gi|2133462|pir||S60123  hypothetical protein R10E11.1 - Caenorhab...   136   4e-32 

 gi|17552710|ref|NP_499160.1|  CBP/p300 homolog CBP-1 (cbp-1) [Cae...   136   5e-32 

 gi|17552708|ref|NP_499161.1|  CBP/p300 homolog CBP-1 (cbp-1) [Cae...   136   5e-32 

 gi|31753089|gb|AAH53889.1|  Unknown (protein for IMAGE:6151364) [...   132   6e-31 

 gi|4557557|ref|NP_001420.1|  E1A binding protein p300; E1A-bindin...   130   4e-30 

 gi|631119|pir||S39162  transcription coactivator CREB-binding pro...   127   2e-29 

 gi|4758056|ref|NP_004371.1|  CREB binding protein [Homo sapiens] ...   127   2e-29 

 gi|4321116|gb|AAC51331.2|  CREB-binding protein [Homo sapiens]         127   2e-29 

 gi|19547885|gb|AAL87531.1|  CREB-binding protein [Mus musculus] >...   126   7e-29 

 gi|737920|prf||1923401A  protein CBP                                   126   9e-29 

 gi|1345703|sp|P45481|CBP_MOUSE  CREB-binding protein >gi|481698|p...   125   1e-28 

 gi|24461860|gb|AAN62347.1|AF506028_14  CTV.20 [Poncirus trifoliata]    124   2e-28 

 gi|482238|pir||S41033  hypothetical protein K03H1.10 - Caenorhabd...   122   1e-27 

 gi|2996629|gb|AAC08447.1|  CBP [Homo sapiens]                          122   1e-27 

 gi|17554044|ref|NP_499201.1|  TAZ zinc finger and KIX domain cont...   121   2e-27 

 gi|27666550|ref|XP_235770.1|  similar to E1A-associated protein p...   121   2e-27 

 gi|28486616|ref|XP_283295.1|  similar to E1A-associated protein p...   121   2e-27 

 gi|28071313|dbj|BAC56002.1|  P0705A05.20 [Oryza sativa (japonica ...   120   4e-27 

 gi|27663074|ref|XP_235502.1|  similar to E1A-associated protein p...   117   2e-26 

 gi|21307831|gb|AAL54859.1|  CREB-binding protein [Aplysia califor...   117   2e-26 

 gi|547239|gb|AAB31182.1|  p300=transcription coactivator {N-termi...   116   6e-26 

 gi|27881767|gb|AAH44677.1|  Similar to CREB binding protein (Rubi...   114   3e-25 

 gi|31204369|ref|XP_311133.1|  ENSANGP00000004748 [Anopheles gambi...   108   1e-23 

 gi|7511830|pir||T13828  CREB-binding protein homolog - fruit fly ...   108   2e-23 

 gi|24640865|ref|NP_524642.2|  nejire CG15319-PB [Drosophila melan...   106   5e-23 

 gi|4139873|pdb|1KDX|A  Chain A, Kix Domain Of Mouse Cbp (Creb Bin...   103   6e-22 

 gi|17508323|ref|NP_493339.1|  KIX domain containing protein famil...    99   1e-20 

 gi|27260984|dbj|BAC45101.1|  OJ1705_C03.23 [Oryza sativa (japonic...    91   4e-18 

 gi|7493813|pir||T18235  transcription activator GAL11 homolog - y...    89   1e-17 

 gi|23127315|ref|ZP_00109188.1|  hypothetical protein [Nostoc punc...    77   5e-14 

 gi|15226772|ref|NP_178842.1|  hypothetical protein [Arabidopsis t...    68   2e-11 

 gi|27260985|dbj|BAC45102.1|  OJ1705_C03.24 [Oryza sativa (japonic...    48   2e-05 

 gi|17552402|ref|NP_497144.1|  TAZ zinc finger family member [Caen...    45   2e-04 

 gi|19074594|ref|NP_586100.1|  MADS domain [Encephalitozoon cunicu...    41   0.004 

 gi|17567279|ref|NP_509376.1|  KIX domain containing protein famil...    41   0.005 


Sequences with E-value WORSE than threshold


 gi|27260988|dbj|BAC45105.1|  OJ1705_C03.27 [Oryza sativa (japonic...    39   0.010 

 gi|17559186|ref|NP_507512.1|  Predicted CDS, putative cytoplasmic...    38   0.031 

 gi|25396635|pir||E89403  protein C06H5.4 [imported] - Caenorhabdi...    37   0.038 

 gi|7487910|pir||T01055  hypothetical protein YUP8H12R.38 - Arabid...    37   0.047 

 gi|18412221|ref|NP_565197.1|  p300/CBP acetyltransferase-related ...    37   0.066 

 gi|17549180|ref|NP_522520.1|  PROBABLE SIGMA-54 INTERACTING TRANS...    37   0.069 

 gi|25148761|ref|NP_741151.1|  Putative nuclear protein, nematode ...    34   0.31  

 gi|4104919|gb|AAD13337.1|  poly(A) binding protein I [Trypanosoma...    34   0.37  

 gi|19112182|ref|NP_595390.1|  putative transcriptional regulatory...    34   0.57  

 gi|25148756|ref|NP_741152.1|  Putative nuclear protein, nematode ...    33   0.77  

 gi|30421354|gb|AAP31290.1|  Hsc-70-interacting protein-like prote...    33   0.77  


Alignments








>gi|22329593|ref|NP_173031.2|   expressed protein [Arabidopsis thaliana]
 gi|25513497|pir||C86292   F7H2.13 protein - Arabidopsis thaliana
 gi|8927658|gb|AAF82149.1|AC034256_13   ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene.
           [Arabidopsis thaliana]
 gi|12083256|gb|AAG48787.1|AF332424_1   unknown protein [Arabidopsis thaliana]
          Length = 179

 Score =  193 bits (490), Expect = 5e-49
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60
           MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ
Sbjct: 1   MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60

Query: 61  TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120
           TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS
Sbjct: 61  TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120

Query: 121 RQKNINALLDTLKKIVPHSGKEGID 145
           RQKNINALLDTLKKIVPHSGKEGID
Sbjct: 121 RQKNINALLDTLKKIVPHSGKEGID 145




 Score = 78.3 bits (192), Expect = 2e-14
 Identities = 34/72 (47%), Positives = 47/72 (65%)

Query: 3   TTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62
            TGDWRTQ P  SR + +N +++T  K +P    EG +EL +IAV  EE +FN+A NQ +
Sbjct: 108 NTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQED 167

Query: 63  YLRQICMKMLNM 74
           YL +I +KM  M
Sbjct: 168 YLGKISLKMRTM 179



>gi|15218294|ref|NP_173030.1|   expressed protein [Arabidopsis thaliana]
          Length = 1335

 Score =  155 bits (392), Expect = 1e-37
 Identities = 69/128 (53%), Positives = 82/128 (64%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           TGDWRTQ P  SR +IVNKIMET  K LPF  PEG NELR+IA RFEEK+F+ A NQT+Y
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123
           LR+I MKML METKSQNAAGSS+A           S+P N+  +  G   T Q Q  +  
Sbjct: 79  LRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPTNQGQLLPGSLSTNQSQAPQPL 138

Query: 124 NINALLDT 131
               + + 
Sbjct: 139 LSQTMQNN 146




 Score = 73.7 bits (180), Expect = 5e-13
 Identities = 31/48 (64%), Positives = 40/48 (83%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+
Sbjct: 8   PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN 55



>gi|24461867|gb|AAN62354.1|AF506028_23   CTV.22 [Poncirus trifoliata]
          Length = 1405

 Score =  149 bits (377), Expect = 6e-36
 Identities = 56/135 (41%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           TGDWRTQ    SR RIVNKIM+T  + LPF   +G NEL+KIA RFEEK++  AS+Q++Y
Sbjct: 34  TGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDY 93

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN------NEPAVNTGDWRTQQP 117
           LR+I +KML+ME+KSQNA  +S   +N       P   +      N+           Q 
Sbjct: 94  LRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPGSMQNQVHNQGQSLPIPLSANQS 153

Query: 118 QDSRQKNINALLDTL 132
           Q  +Q     + + +
Sbjct: 154 QVRQQLLSQNIQNNM 168




 Score = 69.4 bits (169), Expect = 9e-12
 Identities = 23/48 (47%), Positives = 36/48 (75%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           P+ P  E  ++TGDWRTQ   DSRQ+ +N ++DTLK+ +P SG++G++
Sbjct: 23  PTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLN 70



>gi|21243753|ref|NP_643335.1|   transcriptional regulator [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109340|gb|AAM37871.1|   transcriptional regulator [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 534

 Score =  143 bits (361), Expect = 5e-34
 Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 11/131 (8%)

Query: 10  QFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM 69
           +        +   +M+       +  PE   EL ++ +R             + +++   
Sbjct: 319 RHGLDHGQVVTEVLMDALT---HYSWPENLQELERVVLRLAVMTAGRPIGSAD-IQRHAP 374

Query: 70  KMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALL 129
           ++L    K       ++       L  EP+ P         DW    P    Q+    L 
Sbjct: 375 RLLEGRVKGAQHDACATMSQ-PADLPAEPTPPGT-----PVDWIDGLPHRPGQRLAT-LH 427

Query: 130 DTLKKIVPHSG 140
           D L++ + H G
Sbjct: 428 DALRRALVHLG 438



>gi|25511635|pir||B86292   F7H2.12 protein - Arabidopsis thaliana
 gi|8927657|gb|AAF82148.1|AC034256_12   EST gb|N38213 comes from this gene. [Arabidopsis thaliana]
          Length = 1366

 Score =  139 bits (352), Expect = 6e-33
 Identities = 69/159 (43%), Positives = 82/159 (51%), Gaps = 31/159 (19%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ--- 60
           TGDWRTQ P  SR +IVNKIMET  K LPF  PEG NELR+IA RFEEK+F+ A NQ   
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQRFV 78

Query: 61  ----------------------------TEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92
                                       T+YLR+I MKML METKSQNAAGSS+A     
Sbjct: 79  RQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTMETKSQNAAGSSAAIPAAN 138

Query: 93  PLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDT 131
                 S+P N+  +  G   T Q Q  +      + + 
Sbjct: 139 NGTSIDSIPTNQGQLLPGSLSTNQSQAPQPLLSQTMQNN 177




 Score = 73.7 bits (180), Expect = 4e-13
 Identities = 31/48 (64%), Positives = 40/48 (83%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+
Sbjct: 8   PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN 55



>gi|2133462|pir||S60123   hypothetical protein R10E11.1 - Caenorhabditis elegans
          Length = 2027

 Score =  136 bits (344), Expect = 4e-32
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 9/108 (8%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTN-----ELRKIAVRFEEKLFNN 56
           D T +W  Q     R+ +V K+++      P    E  N     +L   A + E+++F +
Sbjct: 593 DCTKEWHHQVTKDLRNHLVGKLVKAI---FPEPNQEAMNDNRLKDLIAYARKVEKEMFES 649

Query: 57  ASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104
           A+++ EY   +  K+  ++ K      +S  +            P+NE
Sbjct: 650 ANDREEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 696



>gi|17552710|ref|NP_499160.1|   CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans]
 gi|20455476|sp|P34545|CBP1_CAEEL   Protein cbp-1
 gi|25299632|pir||G88564   protein R10E11.1 [imported] - Caenorhabditis elegans
 gi|17645979|emb|CAD18875.1|   C. elegans CBP-1 protein (corresponding sequence R10E11.1b)
           [Caenorhabditis elegans]
          Length = 2056

 Score =  136 bits (344), Expect = 5e-32
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 9/108 (8%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTN-----ELRKIAVRFEEKLFNN 56
           D T +W  Q     R+ +V K+++      P    E  N     +L   A + E+++F +
Sbjct: 593 DCTKEWHHQVTKDLRNHLVGKLVKAI---FPEPNQEAMNDNRLKDLIAYARKVEKEMFES 649

Query: 57  ASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104
           A+++ EY   +  K+  ++ K      +S  +            P+NE
Sbjct: 650 ANDREEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 696



>gi|17552708|ref|NP_499161.1|   CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans]
 gi|14530537|emb|CAA82353.2|   C. elegans CBP-1 protein (corresponding sequence R10E11.1a)
           [Caenorhabditis elegans]
          Length = 2045

 Score =  136 bits (344), Expect = 5e-32
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 9/108 (8%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTN-----ELRKIAVRFEEKLFNN 56
           D T +W  Q     R+ +V K+++      P    E  N     +L   A + E+++F +
Sbjct: 582 DCTKEWHHQVTKDLRNHLVGKLVKAI---FPEPNQEAMNDNRLKDLIAYARKVEKEMFES 638

Query: 57  ASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104
           A+++ EY   +  K+  ++ K      +S  +            P+NE
Sbjct: 639 ANDREEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 685



>gi|31753089|gb|AAH53889.1|   Unknown (protein for IMAGE:6151364) [Homo sapiens]
          Length = 1553

 Score =  132 bits (334), Expect = 6e-31
 Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 26/142 (18%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+N
Sbjct: 569 KQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESANN 625

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSS-----------------ADDNTPPLVPEPSVPN 102
           + EY   +  K+  ++ K       +                   +       P+P + +
Sbjct: 626 RAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQPGMTS 684

Query: 103 NEPAVNTGDWRTQQPQDSRQKN 124
           N P  +    R   P     + 
Sbjct: 685 NGPLPDPSMIRGSVPNQMMPRI 706



>gi|4557557|ref|NP_001420.1|   E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens]
 gi|3024341|sp|Q09472|P300_HUMAN   E1A-associated protein p300
 gi|627657|pir||A54277   transcription adaptor protein p300 - human
 gi|495301|gb|AAA18639.1|   p300 protein
          Length = 2414

 Score =  130 bits (327), Expect = 4e-30
 Identities = 21/142 (14%), Positives = 45/142 (31%), Gaps = 26/142 (18%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+N
Sbjct: 569 KQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESANN 625

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSS-----------------ADDNTPPLVPEPSVPN 102
           + EY   +  K+  ++ K       +                   +       P+P + +
Sbjct: 626 RAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQPGMTS 684

Query: 103 NEPAVNTGDWRTQQPQDSRQKN 124
           N P  +    R   P     + 
Sbjct: 685 NGPLPDPSMIRGSVPNQMMPRI 706



>gi|631119|pir||S39162   transcription coactivator CREB-binding protein - human
          Length = 2440

 Score =  127 bits (321), Expect = 2e-29
 Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 21/134 (15%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        RS +V+K+++      P   P    +     L   A + E  ++ +A++
Sbjct: 590 KGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 646

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PAV 107
           + EY   +  K+  ++ K       S                P    P +P  +   P  
Sbjct: 647 RDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQSVRPPN 705

Query: 108 NTGDWRTQQPQDSR 121
                   + Q S+
Sbjct: 706 GPLSLPVNRMQVSQ 719



>gi|4758056|ref|NP_004371.1|   CREB binding protein [Homo sapiens]
 gi|3023440|sp|Q92793|CBP_HUMAN   CREB-binding protein
 gi|2443859|gb|AAC51770.1|   CREB-binding protein
          Length = 2442

 Score =  127 bits (321), Expect = 2e-29
 Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 21/134 (15%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        RS +V+K+++      P   P    +     L   A + E  ++ +A++
Sbjct: 590 KGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 646

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PAV 107
           + EY   +  K+  ++ K       S                P    P +P  +   P  
Sbjct: 647 RDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPPN 705

Query: 108 NTGDWRTQQPQDSR 121
                   + Q S+
Sbjct: 706 GPLSLPVNRMQVSQ 719



>gi|4321116|gb|AAC51331.2|   CREB-binding protein [Homo sapiens]
          Length = 2442

 Score =  127 bits (321), Expect = 2e-29
 Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 21/134 (15%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        RS +V+K+++      P   P    +     L   A + E  ++ +A++
Sbjct: 590 KGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 646

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PAV 107
           + EY   +  K+  ++ K       S                P    P +P  +   P  
Sbjct: 647 RDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPPN 705

Query: 108 NTGDWRTQQPQDSR 121
                   + Q S+
Sbjct: 706 GPLSLPVNRMQVSQ 719



>gi|19547885|gb|AAL87531.1|   CREB-binding protein [Mus musculus]
 gi|19547887|gb|AAL87532.1|   CREB-binding protein [Mus musculus]
          Length = 2429

 Score =  126 bits (317), Expect = 7e-29
 Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 21/134 (15%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        RS +V+K+++      P   P    +     L   A + E  ++ +A++
Sbjct: 583 KGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 639

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PAV 107
           + EY   +  K+  ++ K       S                     P +P  +   P  
Sbjct: 640 RDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPASGAQPPVIPPAQSVRPPN 698

Query: 108 NTGDWRTQQPQDSR 121
                   + Q S+
Sbjct: 699 GPLPLPVNRMQVSQ 712



>gi|737920|prf||1923401A   protein CBP
          Length = 2441

 Score =  126 bits (316), Expect = 9e-29
 Identities = 20/134 (14%), Positives = 43/134 (32%), Gaps = 21/134 (15%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W  +     RS +V+K+++      P   P    +     L   A + E  ++ +A++
Sbjct: 589 KGWHERVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 645

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PAV 107
           + EY   +  K+  ++ K       +                     P +P  +   P  
Sbjct: 646 RDEYYHLLAEKIYKIQ-KELEEKRRTRLHKQGILGNQPALPASGAQPPVIPPAQSVRPPN 704

Query: 108 NTGDWRTQQPQDSR 121
                   + Q S+
Sbjct: 705 GPLPLPVNRMQVSQ 718



>gi|1345703|sp|P45481|CBP_MOUSE   CREB-binding protein
 gi|481698|pir||S39161   CREB-binding protein - mouse
 gi|435855|gb|AAB28651.1|   CREB-binding protein; CBP [Mus sp.]
          Length = 2441

 Score =  125 bits (315), Expect = 1e-28
 Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 21/134 (15%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        RS +V+K+++      P   P    +     L   A + E  ++ +A++
Sbjct: 589 KGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 645

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PAV 107
           + EY   +  K+  ++ K       +                     P +P  +   P  
Sbjct: 646 RDEYYHLLAEKIYKIQ-KELEEKRRTRLHKQGILGNQPALPASGAQPPVIPPAQSVRPPN 704

Query: 108 NTGDWRTQQPQDSR 121
                   + Q S+
Sbjct: 705 GPLPLPVNRMQVSQ 718



>gi|24461860|gb|AAN62347.1|AF506028_14   CTV.20 [Poncirus trifoliata]
          Length = 3148

 Score =  124 bits (313), Expect = 2e-28
 Identities = 52/105 (49%), Positives = 71/105 (67%), Gaps = 7/105 (6%)

Query: 6   DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
           DWR      SR RIVNKIM+T  + LPF  PEG NEL++IA RFEEK+F +A++Q++YLR
Sbjct: 16  DWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQSDYLR 75

Query: 66  QICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110
           +I +KML+ME++SQNA+GS     N PP       P  +  ++T 
Sbjct: 76  KISLKMLSMESRSQNASGS-----NEPPHPGIK--PLTKEGLDTS 113




 Score = 76.0 bits (186), Expect = 9e-14
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 107 VNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           ++  DWR     DSRQ+ +N ++DTLK+ +P SG EG++
Sbjct: 12  LDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLN 50



>gi|482238|pir||S41033   hypothetical protein K03H1.10 - Caenorhabditis elegans  (fragment)
          Length = 316

 Score =  122 bits (306), Expect = 1e-27
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 1/92 (1%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           T +W  Q  +  R+ IV K+++        +      +L   A + E+++F  A ++  Y
Sbjct: 160 TKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYARKVEKEVFETAIDRKNY 219

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLV 95
              +  K+  ++ K      +S  +       
Sbjct: 220 YHLLAEKIYEIQ-KELQEKKNSRLNQGAAQSP 250



>gi|2996629|gb|AAC08447.1|   CBP [Homo sapiens]
          Length = 555

 Score =  122 bits (306), Expect = 1e-27
 Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 21/134 (15%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        RS +V+K+++      P   P    +     L   A + E  ++ +A++
Sbjct: 324 KGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 380

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNE---PAV 107
           + EY   +  K+  ++ K       S                P    P +P  +   P  
Sbjct: 381 RDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPPN 439

Query: 108 NTGDWRTQQPQDSR 121
                   + Q S+
Sbjct: 440 GPLSLPVNRMQVSQ 453



>gi|17554044|ref|NP_499201.1|   TAZ zinc finger and KIX domain containing protein family member
           (36.7 kD) [Caenorhabditis elegans]
 gi|25395947|pir||D88569   protein K03H1.10 [imported] - Caenorhabditis elegans
 gi|3877003|emb|CAA82940.1|   Hypothetical protein K03H1.10 [Caenorhabditis elegans]
 gi|3878179|emb|CAA82665.1|   Hypothetical protein K03H1.10 [Caenorhabditis elegans]
          Length = 322

 Score =  121 bits (305), Expect = 2e-27
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 1/92 (1%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           T +W  Q  +  R+ IV K+++        +      +L   A + E+++F  A ++  Y
Sbjct: 166 TKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYARKVEKEVFETAIDRKNY 225

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLV 95
              +  K+  ++ K      +S  +       
Sbjct: 226 YHLLAEKIYEIQ-KELQEKKNSRLNQGAAQSP 256



>gi|27666550|ref|XP_235770.1|   similar to E1A-associated protein p300 [Rattus norvegicus]
          Length = 1605

 Score =  121 bits (304), Expect = 2e-27
 Identities = 20/155 (12%), Positives = 44/155 (28%), Gaps = 39/155 (25%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+N
Sbjct: 198 KQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESANN 254

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDN----------------TPPLVPEPSVPNN 103
           + EY   +  K+  ++ K       +                      P +  +P+    
Sbjct: 255 RAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPSAPGMVPVPMNTAPNMGQQPTGMTT 313

Query: 104 E--------------PAVNTGDWRTQQPQDSRQKN 124
           +              P  +    R   P     + 
Sbjct: 314 KTKGYLTISVSTPDGPLPDPSMIRGSVPNQMMPRM 348



>gi|28486616|ref|XP_283295.1|   similar to E1A-associated protein p300 [Mus musculus]
 gi|29244384|ref|NP_808489.1|   hypothetical protein A730011L11 [Mus musculus]
 gi|26335221|dbj|BAC31311.1|   unnamed protein product [Mus musculus]
          Length = 714

 Score =  121 bits (304), Expect = 2e-27
 Identities = 19/142 (13%), Positives = 41/142 (28%), Gaps = 26/142 (18%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+N
Sbjct: 570 KQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESANN 626

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADD-----------------NTPPLVPEPSVPN 102
           + EY   +  K+  ++ K       +                      +        +  
Sbjct: 627 RAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAPGMGPVPMNTGSNMGQQPTGMTT 685

Query: 103 NEPAVNTGDWRTQQPQDSRQKN 124
           N P  +    R   P     + 
Sbjct: 686 NGPVPDPSMIRGSVPNHMMPRM 707



>gi|28071313|dbj|BAC56002.1|   P0705A05.20 [Oryza sativa (japonica cultivar-group)]
          Length = 1359

 Score =  120 bits (301), Expect = 4e-27
 Identities = 51/93 (54%), Positives = 68/93 (73%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64
           GDWR+Q  S +R+RIVNKIM+T  K LP   PEG NEL+KIAVRFEEK++  A++Q++YL
Sbjct: 35  GDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYL 94

Query: 65  RQICMKMLNMETKSQNAAGSSSADDNTPPLVPE 97
           R+I +KML+METK+Q   G++    N  P   E
Sbjct: 95  RKISLKMLSMETKTQQNPGNAQVIQNQNPPGSE 127




 Score = 61.7 bits (149), Expect = 2e-09
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 83  GSSSADDNTPPLVPEPSVPNN-EPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGK 141
           G+        P       PN   PA+  GDWR+Q   ++R + +N ++DTLKK +P S  
Sbjct: 7   GNWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVP 66

Query: 142 EGID 145
           EG++
Sbjct: 67  EGLN 70



>gi|27663074|ref|XP_235502.1|   similar to E1A-associated protein p300 [Rattus norvegicus]
          Length = 2156

 Score =  117 bits (295), Expect = 2e-26
 Identities = 20/155 (12%), Positives = 44/155 (28%), Gaps = 39/155 (25%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+N
Sbjct: 198 KQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESANN 254

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDN----------------TPPLVPEPSVPNN 103
           + EY   +  K+  ++ K       +                      P +  +P+    
Sbjct: 255 RAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPSAPGMVPVPMNTAPNMGQQPTGMTT 313

Query: 104 E--------------PAVNTGDWRTQQPQDSRQKN 124
           +              P  +    R   P     + 
Sbjct: 314 KTKGYLTISVSTPDGPLPDPSMIRGSVPNQMMPRM 348



>gi|21307831|gb|AAL54859.1|   CREB-binding protein [Aplysia californica]
          Length = 2245

 Score =  117 bits (295), Expect = 2e-26
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 14/111 (12%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
            DW  Q     R+ +V+K+++      P        +     L   A + E  ++ +A+N
Sbjct: 503 KDWHAQVTQDLRNHLVHKLVQAI---FPTPDQATLRDSRMKNLVAYARKVEGDMYESANN 559

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSAD-DNTPPLVPEPSVPNNEPAVNT 109
           + +Y   +  K+  ++ K             N P       VP  +  ++ 
Sbjct: 560 RGQYYHLLAEKIYKIQ-KELEEKRIQRMKVQNAPN----AQVPGMQGQIHP 605



>gi|547239|gb|AAB31182.1|   p300=transcription coactivator {N-terminal} [mice, Peptide Partial,
           688 aa]
          Length = 688

 Score =  116 bits (291), Expect = 6e-26
 Identities = 18/118 (15%), Positives = 39/118 (33%), Gaps = 15/118 (12%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+N
Sbjct: 570 KQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESANN 626

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSAD------DNTPPLVPEPSVPNNEPAVNTGD 111
           + EY   +  K+  ++ K       +         +         +  +N     TG 
Sbjct: 627 RAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAPGMGPVPMNTGSNMGQQPTGM 683



>gi|27881767|gb|AAH44677.1|   Similar to CREB binding protein (Rubinstein-Taybi syndrome)
           [Xenopus laevis]
          Length = 1047

 Score =  114 bits (285), Expect = 3e-25
 Identities = 18/111 (16%), Positives = 37/111 (33%), Gaps = 10/111 (9%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
             W        R+ +V+K+++      P   P    +     L   A + E  ++ +A++
Sbjct: 579 KAWHEHVTQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESANS 635

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSAD-DNTPPLVPEPSVPNNEPAVNT 109
           + EY   +  K+  ++ K       S                P  +P   T
Sbjct: 636 RDEYYHFLAEKIYKIQ-KELEEKRRSRLQKQGIMSSQAPLQAPGAQPTALT 685



>gi|31204369|ref|XP_311133.1|   ENSANGP00000004748 [Anopheles gambiae]
 gi|30178093|gb|EAA06516.2|   ENSANGP00000004748 [Anopheles gambiae str. PEST]
          Length = 2572

 Score =  108 bits (271), Expect = 1e-23
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
           T DW        R+ +V+K+++      P   P    +     L   A + E  ++  A+
Sbjct: 742 TKDWHHSVTPDLRNHLVHKLVQAI---FPSPDPSAMFDKRMYNLVAYAKKVEGDMYEMAN 798

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSS 86
           +++EY   +  K+  ++ K         
Sbjct: 799 SRSEYYHLLAEKIYKIQ-KELEEKRQKR 825



>gi|7511830|pir||T13828   CREB-binding protein homolog - fruit fly (Drosophila melanogaster)
 gi|1916930|gb|AAB53050.1|   CREB-binding protein homolog [Drosophila melanogaster]
          Length = 3190

 Score =  108 bits (270), Expect = 2e-23
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 2    DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNN 56
            D   DWR    +  R+ +V+K+++      P   P    +     L   A + E+ ++  
Sbjct: 938  DNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994

Query: 57   ASNQTEYLRQICMKMLNMETKSQNAAG 83
            A +++EY   +  K+  ++ K      
Sbjct: 995  AKSRSEYYHLLAEKIYKIQ-KELEEKR 1020



>gi|24640865|ref|NP_524642.2|   nejire CG15319-PB [Drosophila melanogaster]
 gi|22833041|gb|AAF46516.2|   CG15319-PB [Drosophila melanogaster]
          Length = 3276

 Score =  106 bits (266), Expect = 5e-23
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 2    DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNN 56
            D   DWR    +  R+ +V+K+++      P   P    +     L   A + E+ ++  
Sbjct: 938  DNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994

Query: 57   ASNQTEYLRQICMKMLNMETKSQNAAG 83
            A +++EY   +  K+  ++ K      
Sbjct: 995  AKSRSEYYHLLAEKIYKIQ-KELEEKR 1020



>gi|4139873|pdb|1KDX|A   Chain A, Kix Domain Of Mouse Cbp (Creb Binding Protein) In
          Complex With Phosphorylated Kinase Inducible Domain
          (Pkid) Of Rat Creb (Cyclic Amp Response Element Binding
          Protein), Nmr 17 Structures
          Length = 81

 Score =  103 bits (257), Expect = 6e-22
 Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 9/82 (10%)

Query: 5  GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASN 59
            W        RS +V+K+++      P   P    +     L   A + E  ++ +A++
Sbjct: 4  KGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 60

Query: 60 QTEYLRQICMKMLNMETKSQNA 81
          + EY   +  K+  ++ K    
Sbjct: 61 RDEYYHLLAEKIYKIQ-KELEE 81



>gi|17508323|ref|NP_493339.1|   KIX domain containing protein family member (80.3 kD)
           [Caenorhabditis elegans]
 gi|7505888|pir||T23651   hypothetical protein M01E5.6 - Caenorhabditis elegans
 gi|3878635|emb|CAB07643.1|   Hypothetical protein M01E5.6 [Caenorhabditis elegans]
 gi|3879438|emb|CAB03290.1|   Hypothetical protein M01E5.6 [Caenorhabditis elegans]
          Length = 702

 Score = 99.1 bits (246), Expect = 1e-20
 Identities = 15/105 (14%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLP---FIRPEGTNELRKIAVRFEEKLFNNAS 58
           +T+ +W        R+ +V K+++    ++     +  E   +L   A + E ++   ++
Sbjct: 597 NTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASN 653

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNN 103
           ++ EY R + + +  +  K+      ++  ++  P      +  N
Sbjct: 654 DRDEYYRLMQLTVDQILKKTLKKDQRATEHNHQQPTQSSDELAKN 698



>gi|27260984|dbj|BAC45101.1|   OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)]
          Length = 414

 Score = 90.6 bits (224), Expect = 4e-18
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 6  DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
          DWRT+     R R+   I+ +   +L         +L+K+A R EE+++  A +  +YLR
Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71

Query: 66 QICM 69
          +I +
Sbjct: 72 RISL 75



>gi|7493813|pir||T18235   transcription activator GAL11 homolog - yeast (Candida albicans)
 gi|3859719|emb|CAA21993.1|   possible regulatory protein [Candida albicans]
          Length = 1145

 Score = 89.1 bits (220), Expect = 1e-17
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 7   WRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYLR 65
           WR  +    R ++V  I+ T   +L    P      L K+A  FE+ ++  ++++ +YLR
Sbjct: 23  WRAMYSGEERQKVVQIIINTLT-ELHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLR 81

Query: 66  QICMKMLNMETKSQNAAGSSSADDNT 91
            I MK+  +  + Q  A +     N 
Sbjct: 82  AIKMKVHQLRVQKQQIAANQGGQINP 107



>gi|23127315|ref|ZP_00109188.1|   hypothetical protein [Nostoc punctiforme]
          Length = 469

 Score = 76.8 bits (188), Expect = 5e-14
 Identities = 10/71 (14%), Positives = 23/71 (32%), Gaps = 2/71 (2%)

Query: 34  IRPEGTNELRK-IAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92
                   + + I +   +++F  A +Q+E LR    +   +           +A +   
Sbjct: 176 TWQYTLKAITRTIVLSLPQEVFERAIDQSEALRTHVEQ-FRVRLSQPQTPQGEAAIELAA 234

Query: 93  PLVPEPSVPNN 103
               E  +P  
Sbjct: 235 NHPQEAELPGT 245



>gi|15226772|ref|NP_178842.1|   hypothetical protein [Arabidopsis thaliana]
 gi|25411357|pir||E84491   hypothetical protein At2g10440 [imported] - Arabidopsis thaliana
 gi|4733973|gb|AAD28655.1|   hypothetical protein [Arabidopsis thaliana]
          Length = 935

 Score = 68.3 bits (166), Expect = 2e-11
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 2  DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61
          +   DWR+Q     R ++++KI+E   ++         N+   IA +FEE  ++ A+++T
Sbjct: 20 NNRIDWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---IASKFEENFYSIATDKT 76



>gi|27260985|dbj|BAC45102.1|   OJ1705_C03.24 [Oryza sativa (japonica cultivar-group)]
          Length = 87

 Score = 48.3 bits (114), Expect = 2e-05
 Identities = 9/37 (24%), Positives = 17/37 (45%)

Query: 24 METQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60
          M     +L         +L+K+A R EE+++  A + 
Sbjct: 39 MPILQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDF 75



>gi|17552402|ref|NP_497144.1|   TAZ zinc finger family member [Caenorhabditis elegans]
 gi|7496697|pir||T33579   hypothetical protein C29F9.6 - Caenorhabditis elegans
 gi|3790688|gb|AAC68748.1|   Hypothetical protein C29F9.6 [Caenorhabditis elegans]
          Length = 228

 Score = 45.2 bits (106), Expect = 2e-04
 Identities = 16/97 (16%), Positives = 39/97 (40%), Gaps = 2/97 (2%)

Query: 3   TTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62
           T+  W ++ P   R  ++ +I +  +       P    ++++ A   E ++F  A ++ E
Sbjct: 116 TSQPWHSEVPKTDREAVIERISKHIMLHPQRFEP--IWKIKEDARAAELQIFEAAGSRDE 173

Query: 63  YLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPS 99
           Y R +  +    + K+    G  +  +       +P 
Sbjct: 174 YYRMVEERAPREQDKAPEGPGQEAQKEEKGAGEEDPD 210



>gi|19074594|ref|NP_586100.1|   MADS domain [Encephalitozoon cuniculi]
 gi|19069236|emb|CAD25704.1|   MADS domain [Encephalitozoon cuniculi]
          Length = 776

 Score = 40.5 bits (94), Expect = 0.004
 Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 5/68 (7%)

Query: 10 QFPSASRSRIVNKIMETQLK--QLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQI 67
                R +++ K+     +    P   P    E    A+R E++++  + ++ EYLR +
Sbjct: 1  MLSQEERKQMILKLFVALKESNIFPGYTPVQIKEA---AIRAEQRIYEESGSKEEYLRGM 57

Query: 68 CMKMLNME 75
            +   +E
Sbjct: 58 DERFQRIE 65



>gi|17567279|ref|NP_509376.1|   KIX domain containing protein family member [Caenorhabditis
           elegans]
 gi|7499689|pir||T16139   hypothetical protein F22F1.3 - Caenorhabditis elegans
 gi|1118044|gb|AAA83283.1|   Hypothetical protein F22F1.3 [Caenorhabditis elegans]
          Length = 295

 Score = 40.5 bits (94), Expect = 0.005
 Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 15  SRSRIVNKIMETQLKQLP--FIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKML 72
            R  ++ KI+   + +            EL++ A   E+K F     + EY  ++   +L
Sbjct: 70  LRQYMITKIVREAVPRPNSDAKNDARMIELKEYATFMEKKSFEKVQTKDEYYAELARIIL 129

Query: 73  NMETKSQNAAGSSSADDNTPPLV 95
           +M+   Q+    S  D  +    
Sbjct: 130 SMQKHLQSRPKGSYEDPYSNIPP 152



>gi|27260988|dbj|BAC45105.1|   OJ1705_C03.27 [Oryza sativa (japonica cultivar-group)]
          Length = 194

 Score = 39.4 bits (91), Expect = 0.010
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 6  DWRTQFPSASRSRIVNKIMETQLK 29
          DWRT+     R R+ + I++    
Sbjct: 12 DWRTRLGQDIRDRVTHDILQASTP 35



>gi|17559186|ref|NP_507512.1|   Predicted CDS, putative cytoplasmic protein, nematode specific
           [Caenorhabditis elegans]
 gi|7498278|pir||T20398   hypothetical protein E01B7.2 - Caenorhabditis elegans
 gi|5824421|emb|CAB54214.1|   Hypothetical protein E01B7.2 [Caenorhabditis elegans]
          Length = 230

 Score = 37.9 bits (87), Expect = 0.031
 Identities = 13/55 (23%), Positives = 21/55 (38%)

Query: 6   DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60
           DW+       R + V KI+ T         P   +EL   +   E   ++ A N+
Sbjct: 56  DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNR 110



>gi|25396635|pir||E89403   protein C06H5.4 [imported] - Caenorhabditis elegans
          Length = 337

 Score = 37.5 bits (86), Expect = 0.038
 Identities = 13/55 (23%), Positives = 21/55 (38%)

Query: 6   DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60
           DW+       R + V KI+ T         P   +EL   +   E   ++ A N+
Sbjct: 177 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNR 231



>gi|7487910|pir||T01055   hypothetical protein YUP8H12R.38 - Arabidopsis thaliana
 gi|3152587|gb|AAC17068.1|   Similar to CREB-binding protein homolog gb|U88570 from D.
           melanogaster and contains similarity to
           callus-associated protein gb|U01961 from Nicotiana
           tabacum.  EST gb|W43427 comes from this gene.
           [Arabidopsis thaliana]
          Length = 1516

 Score = 37.1 bits (85), Expect = 0.047
 Identities = 17/123 (13%), Positives = 42/123 (34%), Gaps = 6/123 (4%)

Query: 15  SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR--QICMKM 71
            R  +  +I     ++ P    E +  +   +A R EE LF  A+ + +Y+    +  ++
Sbjct: 51  LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110

Query: 72  LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSR---QKNINAL 128
            ++    Q    +    +++      P+        N     T     +         + 
Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNPNLMITSSGDATMAGSNNITTSA 170

Query: 129 LDT 131
           ++T
Sbjct: 171 MNT 173



>gi|18412221|ref|NP_565197.1|   p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana]
 gi|12597461|gb|AAG60059.1|   p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana]
          Length = 1654

 Score = 36.7 bits (84), Expect = 0.066
 Identities = 17/123 (13%), Positives = 42/123 (34%), Gaps = 6/123 (4%)

Query: 15  SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR--QICMKM 71
            R  +  +I     ++ P    E +  +   +A R EE LF  A+ + +Y+    +  ++
Sbjct: 51  LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110

Query: 72  LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSR---QKNINAL 128
            ++    Q    +    +++      P+        N     T     +         + 
Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNPNLMITSSGDATMAGSNNITTSA 170

Query: 129 LDT 131
           ++T
Sbjct: 171 MNT 173



>gi|17549180|ref|NP_522520.1|   PROBABLE SIGMA-54 INTERACTING TRANSCRIPTION REGULATOR PROTEIN
           [Ralstonia solanacearum]
 gi|17431432|emb|CAD18110.1|   PROBABLE SIGMA-54 INTERACTING TRANSCRIPTION REGULATOR PROTEIN
           [Ralstonia solanacearum]
          Length = 510

 Score = 36.7 bits (84), Expect = 0.069
 Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 8/68 (11%)

Query: 33  FIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92
           +  P    EL  +  R   K+ +  +++ +        ++ +ET   +    + A  +  
Sbjct: 396 YPWPGNVRELEHVVSRAALKMLSRGASRDD--------IVTLETGLLDLDAQAVAPPSPA 447

Query: 93  PLVPEPSV 100
            L PE S 
Sbjct: 448 GLPPEASP 455



>gi|25148761|ref|NP_741151.1|   Putative nuclear protein, nematode specific [Caenorhabditis
           elegans]
 gi|21450526|gb|AAM54164.1|U00066_6   Hypothetical protein R12B2.5b [Caenorhabditis elegans]
          Length = 777

 Score = 34.4 bits (78), Expect = 0.31
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 19/123 (15%)

Query: 6   DWRTQFPSASRSRIVNKIMETQ------LKQLPFIRPEGTNELRKIAVRFEEKLFNNASN 59
           DW +      R  ++ ++             LP             A + EE +F    +
Sbjct: 5   DWPS---PKFREHVIQRLEPELARNRQNAPNLPVPGD---------ARQVEEYVFAKCMS 52

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD 119
           + EY+R I   +  +   S++AA  S    +     P  +   N PA  T  +R   P D
Sbjct: 53  KDEYMRTIAKVINAINCNSKSAAVPSVLQPSQF-HSPPCTTAGNTPAGGTPGYRAPVPPD 111

Query: 120 SRQ 122
            + 
Sbjct: 112 PQP 114



>gi|4104919|gb|AAD13337.1|   poly(A) binding protein I [Trypanosoma brucei]
          Length = 555

 Score = 34.0 bits (77), Expect = 0.37
 Identities = 8/54 (14%), Positives = 12/54 (22%), Gaps = 4/54 (7%)

Query: 79  QNAAGSSSADDNTPPLVPEPSVPNNEPA----VNTGDWRTQQPQDSRQKNINAL 128
           Q     S            P  P  +      V       QQ     ++  N +
Sbjct: 452 QRPPMQSMMAPQQQSHPQIPQPPVAQGQNLSTVLASMTPDQQKNVLGERLYNYI 505



>gi|19112182|ref|NP_595390.1|   putative transcriptional regulatory protein [Schizosaccharomyces
           pombe]
 gi|7573208|emb|CAB87377.1|   SPBP35G2.15 [Schizosaccharomyces pombe]
          Length = 653

 Score = 33.6 bits (76), Expect = 0.57
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 42  LRKIAVRFEEKLFNNASNQTEYLRQICMKMLNME------TKSQNAAGSSSADDNTPPLV 95
           L  +A+ FE + F+ AS++ EYL     K   +        ++       S  +N   + 
Sbjct: 41  LMNMALSFERQAFDGASSKNEYLTTCGKKTAQLRDQIRDTLQATQMKQMPSVYNNAGNVG 100

Query: 96  PEPSVPNNEPAVNT-GDWRTQQPQDSRQKNINALLDTLK 133
             P+   N  A N     R Q      Q  +      +K
Sbjct: 101 ALPTAGPNRLANNPRVMPRLQNQNVPMQAGMQQFARNMK 139



>gi|25148756|ref|NP_741152.1|   Putative nuclear protein, nematode specific [Caenorhabditis
           elegans]
 gi|21363104|sp|Q21955|YNL5_CAEEL   Hypothetical protein R12B2.5 in chromosome III
 gi|17976542|gb|AAA50743.3|   Hypothetical protein R12B2.5a [Caenorhabditis elegans]
          Length = 780

 Score = 33.2 bits (75), Expect = 0.77
 Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 20/125 (16%)

Query: 6   DWRTQFPSASRSRIVNKIMETQ------LKQLPFIRPEGTNELRKIAVRFEEKLFNNASN 59
           DW +      R  ++ ++             LP             A + EE +F    +
Sbjct: 5   DWPS---PKFREHVIQRLEPELARNRQNAPNLPVPGD---------ARQVEEYVFAKCMS 52

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVP--EPSVPNNEPAVNTGDWRTQQP 117
           + EY+R I   +  +   S++AA  S    +     P    ++  N PA  T  +R   P
Sbjct: 53  KDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTAALLGNTPAGGTPGYRAPVP 112

Query: 118 QDSRQ 122
            D + 
Sbjct: 113 PDPQP 117



>gi|30421354|gb|AAP31290.1|   Hsc-70-interacting protein-like protein [Drosophila simulans]
 gi|30421356|gb|AAP31291.1|   Hsc-70-interacting protein-like protein [Drosophila simulans]
          Length = 363

 Score = 33.2 bits (75), Expect = 0.77
 Identities = 20/134 (14%), Positives = 36/134 (26%), Gaps = 24/134 (17%)

Query: 21  NKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQN 80
           + + +           E   E+   A + E+        + +  R+   + +    + Q 
Sbjct: 208 HDLRQACKLDFDEETDEWLKEVTPNAKKIEQH-------RVKQERRQAERKIKERQRDQR 260

Query: 81  AAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS------RQKNIN-------- 126
            A       N          P   P   T        QD       +    N        
Sbjct: 261 RARKEQEKHNVSSGGSSGEFPPGAPGNITISDILGFMQDPEASAAIQDILSNPGNITKYA 320

Query: 127 ---ALLDTLKKIVP 137
               ++D LKK+VP
Sbjct: 321 SNPKIIDLLKKMVP 334






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Jun 26, 2003  1:47 AM
  Number of letters in database: 468,778,868
  Number of sequences in database:  1,459,938
  
Lambda     K      H
   0.317    0.161    0.421 

Gapped
Lambda     K      H
   0.267   0.0492    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,263,406
Number of Sequences: 1459938
Number of extensions: 6064653
Number of successful extensions: 71333
Number of sequences better than  1.0: 100
Number of HSP's better than  1.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 65160
Number of HSP's gapped (non-prelim): 3579
length of query: 145
length of database: 468,778,868
effective HSP length: 121
effective length of query: 24
effective length of database: 292,126,370
effective search space: 7011032880
effective search space used: 7011032880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)