BLASTP 2.2.6 [Apr-09-2003]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1057255876-027938-7393

Query= PCAP_HUMAN
         (128 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,463,011 sequences; 469,658,079 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs



Results of PSI-Blast iteration 7

Skip to the first new sequence

Legend:
 - means that the alignment score was below the threshold on the previous iteration 
 - means that the alignment was checked on the previous iteration 


Hit list size 
Sequences with E-value BETTER than threshold
Related Structures
                                                                     Score    E
Sequences producing significant alignments:                          (bits) Value


 gi|21748618|dbj|BAC03446.1|  FLJ00386 protein [Homo sapiens]           162   8e-40 

 gi|21312134|ref|NP_056973.2|  positive cofactor 2, glutamine/Q-ri...   162   1e-39 

 gi|14276857|gb|AAK58423.1|AF328769_1  PC2-glutamine-rich-associat...   162   1e-39 

 gi|27734440|sp|Q96RN5|PCAP_HUMAN  Positive cofactor 2 glutamine/Q...   161   2e-39 

 gi|20177999|sp|Q924H2|PCAP_MOUSE  Positive cofactor 2 glutamine/Q...   151   2e-36 

 gi|15809028|ref|NP_291087.1|  positive cofactor 2, glutamine/Q-ri...   147   3e-35 

 gi|2133462|pir||S60123  hypothetical protein R10E11.1 - Caenorhab...   138   2e-32 

 gi|17552710|ref|NP_499160.1|  CBP/p300 homolog CBP-1 (cbp-1) [Cae...   137   4e-32 

 gi|17552708|ref|NP_499161.1|  CBP/p300 homolog CBP-1 (cbp-1) [Cae...   137   4e-32 

 gi|31753089|gb|AAH53889.1|  Unknown (protein for IMAGE:6151364) [...   134   3e-31 

 gi|27666550|ref|XP_235770.1|  similar to E1A-associated protein p...   132   1e-30 

 gi|4557557|ref|NP_001420.1|  E1A binding protein p300; E1A-bindin...   130   4e-30 

 gi|28374176|gb|AAH46263.1|  Similar to PC2 (positive cofactor 2, ...   130   4e-30 

 gi|28486616|ref|XP_283295.1|  similar to E1A-associated protein p...   126   6e-29 

 gi|27663074|ref|XP_235502.1|  similar to E1A-associated protein p...   125   1e-28 

 gi|4758056|ref|NP_004371.1|  CREB binding protein [Homo sapiens] ...   123   6e-28 

 gi|4321116|gb|AAC51331.2|  CREB-binding protein [Homo sapiens]         123   6e-28 

 gi|631119|pir||S39162  transcription coactivator CREB-binding pro...   121   3e-27 

 gi|737920|prf||1923401A  protein CBP                                   119   6e-27 

 gi|1345703|sp|P45481|CBP_MOUSE  CREB-binding protein >gi|481698|p...   119   6e-27 

 gi|19547885|gb|AAL87531.1|  CREB-binding protein [Mus musculus] >...   119   8e-27 

 gi|21956190|gb|AAM83255.1|AF378334_1  ARC105 [Xenopus laevis]          119   9e-27 

 gi|28279616|gb|AAH45472.1|  Similar to PC2 (positive cofactor 2, ...   119   9e-27 

 gi|547239|gb|AAB31182.1|  p300=transcription coactivator {N-termi...   118   2e-26 

 gi|3037135|gb|AAC12944.1|  TPA inducible protein [Homo sapiens]        117   3e-26 

 gi|2996629|gb|AAC08447.1|  CBP [Homo sapiens]                          113   6e-25 

 gi|20891927|ref|XP_147188.1|  positive cofactor 2, multiprotein c...   111   2e-24 

 gi|21307831|gb|AAL54859.1|  CREB-binding protein [Aplysia califor...   111   2e-24 

 gi|482238|pir||S41033  hypothetical protein K03H1.10 - Caenorhabd...   109   7e-24 

 gi|17554044|ref|NP_499201.1|  TAZ zinc finger and KIX domain cont...   108   1e-23 

 gi|4139873|pdb|1KDX|A  Chain A, Kix Domain Of Mouse Cbp (Creb Bin...   105   1e-22 

 gi|25148761|ref|NP_741151.1|  Putative nuclear protein, nematode ...   104   2e-22 

 gi|25148756|ref|NP_741152.1|  Putative nuclear protein, nematode ...   104   3e-22 

 gi|24461867|gb|AAN62354.1|AF506028_23  CTV.22 [Poncirus trifoliata]    102   1e-21 

 gi|27881767|gb|AAH44677.1|  Similar to CREB binding protein (Rubi...   102   1e-21 

 gi|31204369|ref|XP_311133.1|  ENSANGP00000004748 [Anopheles gambi...   100   5e-21 

 gi|19920468|ref|NP_608528.1|  CG4184-PA [Drosophila melanogaster]...    99   2e-20 

 gi|17508323|ref|NP_493339.1|  KIX domain containing protein famil...    98   3e-20 

 gi|22329593|ref|NP_173031.2|  expressed protein [Arabidopsis thal...    95   2e-19 

 gi|7511830|pir||T13828  CREB-binding protein homolog - fruit fly ...    95   2e-19 

 gi|7506661|pir||T16726  hypothetical protein R12B2.5 - Caenorhabd...    94   5e-19 

 gi|24640865|ref|NP_524642.2|  nejire CG15319-PB [Drosophila melan...    93   6e-19 

 gi|15218294|ref|NP_173030.1|  expressed protein [Arabidopsis thal...    92   2e-18 

 gi|17567279|ref|NP_509376.1|  KIX domain containing protein famil...    87   4e-17 

 gi|24461860|gb|AAN62347.1|AF506028_14  CTV.20 [Poncirus trifoliata]     86   1e-16 

 gi|25511635|pir||B86292  F7H2.12 protein - Arabidopsis thaliana >...    77   6e-14 

 gi|28071313|dbj|BAC56002.1|  P0705A05.20 [Oryza sativa (japonica ...    67   7e-11 


Sequences with E-value WORSE than threshold


 gi|17552402|ref|NP_497144.1|  TAZ zinc finger family member [Caen...    39   0.010 

 gi|1168190|sp|P42649|1432_ENTHI  14-3-3 PROTEIN 2 (14-3-3-2) >gi|...    38   0.025 

 gi|22986944|ref|ZP_00032031.1|  hypothetical protein [Burkholderi...    38   0.030 

 gi|7487910|pir||T01055  hypothetical protein YUP8H12R.38 - Arabid...    37   0.077 

 gi|18412221|ref|NP_565197.1|  p300/CBP acetyltransferase-related ...    36   0.11  

 gi|1228035|dbj|BAA12105.1|  The KIAA0191 gene is expressed ubiqui...    36   0.12  

 gi|27480017|ref|XP_038288.7|  similar to The KIAA0191 gene is exp...    36   0.14  

 gi|19074594|ref|NP_586100.1|  MADS domain [Encephalitozoon cunicu...    34   0.35  

 gi|28828236|gb|AAO50913.1|  similar to putative protein; protein ...    34   0.35  

 gi|18025476|gb|AAK95420.1|  BPLF1 [cercopithicine herpesvirus 15]       34   0.35  

 gi|22902403|gb|AAH37667.1|  Similar to RIKEN cDNA 1110025J15 gene...    34   0.35  

 gi|1711284|dbj|BAA13994.1|  choriogenin H [Oryzias latipes]             34   0.38  

 gi|23015571|ref|ZP_00055343.1|  hypothetical protein [Magnetospir...    34   0.40  

 gi|15077063|gb|AAK83050.1|AF287985_1  synapsin isoform 8.2 [Aplys...    34   0.42  

 gi|15077059|gb|AAK83048.1|AF287983_1  synapsin isoform 2.1 [Aplys...    34   0.44  

 gi|21450271|ref|NP_659141.1|  hypothetical protein MGC28864 [Mus ...    34   0.47  

 gi|28918768|gb|EAA28438.1|  hypothetical protein [Neurospora crassa]    34   0.49  

 gi|15077057|gb|AAK83047.1|AF287982_1  synapsin isoform 11.1 [Aply...    34   0.50  

 gi|15077061|gb|AAK83049.1|AF287984_1  synapsin isoform 7.1 [Aplys...    34   0.51  

 gi|22093906|gb|AAM91820.1|AF396668_1  choriogenin H [Oryzias lati...    34   0.56  

 gi|27731125|ref|XP_238784.1|  hypothetical protein XP_238784 [Rat...    34   0.63  

 gi|28919377|gb|EAA28825.1|  hypothetical protein [Neurospora crassa]    33   0.98  

 gi|28917628|gb|EAA27323.1|  hypothetical protein [Neurospora crassa]    33   1.00  


Alignments








>gi|21748618|dbj|BAC03446.1|   FLJ00386 protein [Homo sapiens]
          Length = 811

 Score =  162 bits (411), Expect = 8e-40
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60
           MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA
Sbjct: 24  MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 83

Query: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG 120
           RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG
Sbjct: 84  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG 143

Query: 121 QPMSLSGQ 128
           QPMSLSGQ
Sbjct: 144 QPMSLSGQ 151



>gi|21312134|ref|NP_056973.2|   positive cofactor 2, glutamine/Q-rich-associated protein; TPA
           inducible protein; TPA inducible gene-1;
           PC2-glutamine-rich-associated protein; trinucleotide
           repeat containing 7 [Homo sapiens]
 gi|15559260|gb|AAH13985.1|AAH13985   PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein [Homo sapiens]
          Length = 748

 Score =  162 bits (410), Expect = 1e-39
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60
           MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA
Sbjct: 1   MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60

Query: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG 120
           RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG
Sbjct: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG 120

Query: 121 QPMSLSGQ 128
           QPMSLSGQ
Sbjct: 121 QPMSLSGQ 128



>gi|14276857|gb|AAK58423.1|AF328769_1   PC2-glutamine-rich-associated protein [Homo sapiens]
          Length = 746

 Score =  162 bits (410), Expect = 1e-39
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60
           MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA
Sbjct: 1   MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60

Query: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG 120
           RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG
Sbjct: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG 120

Query: 121 QPMSLSGQ 128
           QPMSLSGQ
Sbjct: 121 QPMSLSGQ 128



>gi|27734440|sp|Q96RN5|PCAP_HUMAN   Positive cofactor 2 glutamine/Q-rich-associated protein (PC2
           glutamine/Q-rich-associated protein) (TPA-inducible
           gene-1) (TIG-1) (Activator-recruited cofactor 105 kDa
           component) (ARC105) (CTG repeat protein 7a)
          Length = 788

 Score =  161 bits (408), Expect = 2e-39
 Identities = 128/128 (100%), Positives = 128/128 (100%)

Query: 1   MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60
           MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA
Sbjct: 1   MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60

Query: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG 120
           RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG
Sbjct: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG 120

Query: 121 QPMSLSGQ 128
           QPMSLSGQ
Sbjct: 121 QPMSLSGQ 128



>gi|20177999|sp|Q924H2|PCAP_MOUSE   Positive cofactor 2 glutamine/Q-rich-associated protein (PC2
           glutamine/Q-rich-associated protein) (mPcqap)
          Length = 792

 Score =  151 bits (381), Expect = 2e-36
 Identities = 120/128 (93%), Positives = 121/128 (94%)

Query: 1   MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60
           MDV GQETDWRS AFR KLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA
Sbjct: 1   MDVWGQETDWRSAAFRLKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60

Query: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG 120
           RLIIHFRDIHNKKSQASVSDPMNALQSLTGGP  GAAGIGMPPRGPGQSLGGMG LGAMG
Sbjct: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIGMPPRGPGQSLGGMGGLGAMG 120

Query: 121 QPMSLSGQ 128
           QP+ LSGQ
Sbjct: 121 QPLPLSGQ 128



>gi|15809028|ref|NP_291087.1|   positive cofactor 2, glutamine/Q-rich-associated protein [Mus
           musculus]
 gi|14276859|gb|AAK58424.1|AF328770_1   PC2-glutamine-rich-associated protein [Mus musculus]
          Length = 667

 Score =  147 bits (372), Expect = 3e-35
 Identities = 120/128 (93%), Positives = 121/128 (94%)

Query: 1   MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60
           MDV GQETDWRS AFR KLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA
Sbjct: 1   MDVWGQETDWRSAAFRLKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60

Query: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG 120
           RLIIHFRDIHNKKSQASVSDPMNALQSLTGGP  GAAGIGMPPRGPGQSLGGMG LGAMG
Sbjct: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPTPGAAGIGMPPRGPGQSLGGMGGLGAMG 120

Query: 121 QPMSLSGQ 128
           QP+ LSGQ
Sbjct: 121 QPLPLSGQ 128



>gi|2133462|pir||S60123   hypothetical protein R10E11.1 - Caenorhabditis elegans
          Length = 2027

 Score =  138 bits (347), Expect = 2e-32
 Identities = 28/157 (17%), Positives = 53/157 (33%), Gaps = 31/157 (19%)

Query: 2   DVSGQETDWRST---AFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLK 48
           D+     +W        R  LV ++  A+  +                 ++ +E  +F  
Sbjct: 590 DMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFES 649

Query: 49  AKTRDEYLSLVARLIIHFRDIHNKKSQASVSD-----------PMNALQSLTG------G 91
           A  R+EY  L+A  I   +    +K  + ++            P N L  + G       
Sbjct: 650 ANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQMLGVEGGRSD 709

Query: 92  PAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQ 128
             +  + + + P    Q  GG  +   M Q +  +GQ
Sbjct: 710 VHSEGSSMAVAPSQQNQPWGGAPN-SNMHQQIPPNGQ 745



>gi|17552710|ref|NP_499160.1|   CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans]
 gi|20455476|sp|P34545|CBP1_CAEEL   Protein cbp-1
 gi|25299632|pir||G88564   protein R10E11.1 [imported] - Caenorhabditis elegans
 gi|17645979|emb|CAD18875.1|   C. elegans CBP-1 protein (corresponding sequence R10E11.1b)
           [Caenorhabditis elegans]
          Length = 2056

 Score =  137 bits (345), Expect = 4e-32
 Identities = 28/157 (17%), Positives = 53/157 (33%), Gaps = 31/157 (19%)

Query: 2   DVSGQETDWRST---AFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLK 48
           D+     +W        R  LV ++  A+  +                 ++ +E  +F  
Sbjct: 590 DMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFES 649

Query: 49  AKTRDEYLSLVARLIIHFRDIHNKKSQASVSD-----------PMNALQSLTG------G 91
           A  R+EY  L+A  I   +    +K  + ++            P N L  + G       
Sbjct: 650 ANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQMLGVEGGRSD 709

Query: 92  PAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQ 128
             +  + + + P    Q  GG  +   M Q +  +GQ
Sbjct: 710 VHSEGSSMAVAPSQQNQPWGGAPN-SNMHQQIPPNGQ 745



>gi|17552708|ref|NP_499161.1|   CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans]
 gi|14530537|emb|CAA82353.2|   C. elegans CBP-1 protein (corresponding sequence R10E11.1a)
           [Caenorhabditis elegans]
          Length = 2045

 Score =  137 bits (345), Expect = 4e-32
 Identities = 28/157 (17%), Positives = 53/157 (33%), Gaps = 31/157 (19%)

Query: 2   DVSGQETDWRST---AFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLK 48
           D+     +W        R  LV ++  A+  +                 ++ +E  +F  
Sbjct: 579 DMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFES 638

Query: 49  AKTRDEYLSLVARLIIHFRDIHNKKSQASVSD-----------PMNALQSLTG------G 91
           A  R+EY  L+A  I   +    +K  + ++            P N L  + G       
Sbjct: 639 ANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQMLGVEGGRSD 698

Query: 92  PAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQ 128
             +  + + + P    Q  GG  +   M Q +  +GQ
Sbjct: 699 VHSEGSSMAVAPSQQNQPWGGAPN-SNMHQQIPPNGQ 734



>gi|31753089|gb|AAH53889.1|   Unknown (protein for IMAGE:6151364) [Homo sapiens]
          Length = 1553

 Score =  134 bits (338), Expect = 3e-31
 Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 20/137 (14%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          ++ +E  ++  A  
Sbjct: 566 GIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVEGDMYESANN 625

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRG-PGQSL 110
           R EY  L+A  I   +    +K +  +       Q++     AG   + M P    GQ  
Sbjct: 626 RAEYYHLLAEKIYKIQKELEEKRRTRLQK-----QNMLPNA-AGMVPVSMNPGPNMGQPQ 679

Query: 111 GGMGSLGAMGQPMSLSG 127
            GM S G +  P  + G
Sbjct: 680 PGMTSNGPLPDPSMIRG 696



>gi|27666550|ref|XP_235770.1|   similar to E1A-associated protein p300 [Rattus norvegicus]
          Length = 1605

 Score =  132 bits (332), Expect = 1e-30
 Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 33/150 (22%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          ++ +E  ++  A  
Sbjct: 195 GIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVEGDMYESANN 254

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAG-AAGIGMPPRGPGQSL 110
           R EY  L+A  I   +    +K +  +       Q++           +   P   GQ  
Sbjct: 255 RAEYYHLLAEKIYKIQKELEEKRRTRLQK-----QNMLPSAPGMVPVPMNTAP-NMGQQP 308

Query: 111 GGMGS-------------LGAMGQPMSLSG 127
            GM +              G +  P  + G
Sbjct: 309 TGMTTKTKGYLTISVSTPDGPLPDPSMIRG 338



>gi|4557557|ref|NP_001420.1|   E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens]
 gi|3024341|sp|Q09472|P300_HUMAN   E1A-associated protein p300
 gi|627657|pir||A54277   transcription adaptor protein p300 - human
 gi|495301|gb|AAA18639.1|   p300 protein
          Length = 2414

 Score =  130 bits (328), Expect = 4e-30
 Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 20/137 (14%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          ++ +E  ++  A  
Sbjct: 566 GIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVEGDMYESANN 625

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRG-PGQSL 110
           R EY  L+A  I   +    +K +  +       Q++     AG   + M P    GQ  
Sbjct: 626 RAEYYHLLAEKIYKIQKELEEKRRTRLQK-----QNMLPNA-AGMVPVSMNPGPNMGQPQ 679

Query: 111 GGMGSLGAMGQPMSLSG 127
            GM S G +  P  + G
Sbjct: 680 PGMTSNGPLPDPSMIRG 696



>gi|28374176|gb|AAH46263.1|   Similar to PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein [Xenopus laevis]
          Length = 846

 Score =  130 bits (328), Expect = 4e-30
 Identities = 77/112 (68%), Positives = 90/112 (80%)

Query: 17  QKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQA 76
           QKLVSQI++AMRKAGVAH+KSSK+MESHVFLKAKTR+EYLSLVARLIIHFRDI NKK+Q 
Sbjct: 1   QKLVSQIDEAMRKAGVAHTKSSKEMESHVFLKAKTREEYLSLVARLIIHFRDIFNKKNQT 60

Query: 77  SVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQ 128
           + SDPMNALQ+LTG    G  G+GM  R  G  +G MG +  + Q M+L GQ
Sbjct: 61  AASDPMNALQNLTGNAVVGGQGMGMGVRPQGAQMGAMGGMTQIAQQMNLPGQ 112



>gi|28486616|ref|XP_283295.1|   similar to E1A-associated protein p300 [Mus musculus]
 gi|29244384|ref|NP_808489.1|   hypothetical protein A730011L11 [Mus musculus]
 gi|26335221|dbj|BAC31311.1|   unnamed protein product [Mus musculus]
          Length = 714

 Score =  126 bits (318), Expect = 6e-29
 Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 20/137 (14%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          ++ +E  ++  A  
Sbjct: 567 GIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVEGDMYESANN 626

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAA-GAAGIGMPPRGPGQSL 110
           R EY  L+A  I   +    +K +  +       Q++       G   +       GQ  
Sbjct: 627 RAEYYHLLAEKIYKIQKELEEKRRTRLQK-----QNMLPNAPGMGPVPMNTG-SNMGQQP 680

Query: 111 GGMGSLGAMGQPMSLSG 127
            GM + G +  P  + G
Sbjct: 681 TGMTTNGPVPDPSMIRG 697



>gi|27663074|ref|XP_235502.1|   similar to E1A-associated protein p300 [Rattus norvegicus]
          Length = 2156

 Score =  125 bits (314), Expect = 1e-28
 Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 33/150 (22%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          ++ +E  ++  A  
Sbjct: 195 GIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVEGDMYESANN 254

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAG-AAGIGMPPRGPGQSL 110
           R EY  L+A  I   +    +K +  +       Q++           +   P   GQ  
Sbjct: 255 RAEYYHLLAEKIYKIQKELEEKRRTRLQK-----QNMLPSAPGMVPVPMNTAP-NMGQQP 308

Query: 111 GGMGS-------------LGAMGQPMSLSG 127
            GM +              G +  P  + G
Sbjct: 309 TGMTTKTKGYLTISVSTPDGPLPDPSMIRG 338



>gi|4758056|ref|NP_004371.1|   CREB binding protein [Homo sapiens]
 gi|3023440|sp|Q92793|CBP_HUMAN   CREB-binding protein
 gi|2443859|gb|AAC51770.1|   CREB-binding protein
          Length = 2442

 Score =  123 bits (309), Expect = 6e-28
 Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 19/133 (14%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          +K +E  ++  A +
Sbjct: 587 GVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 646

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLG 111
           RDEY  L+A  I   +    +K ++ +       Q + G   A  A    PP  P     
Sbjct: 647 RDEYYHLLAEKIYKIQKELEEKRRSRLHK-----QGILGNQPALPAPGAQPPVIPQAQ-P 700

Query: 112 GMGSLGAMGQPMS 124
                G +  P++
Sbjct: 701 VRPPNGPLSLPVN 713



>gi|4321116|gb|AAC51331.2|   CREB-binding protein [Homo sapiens]
          Length = 2442

 Score =  123 bits (309), Expect = 6e-28
 Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 19/133 (14%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          +K +E  ++  A +
Sbjct: 587 GVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 646

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLG 111
           RDEY  L+A  I   +    +K ++ +       Q + G   A  A    PP  P     
Sbjct: 647 RDEYYHLLAEKIYKIQKELEEKRRSRLHK-----QGILGNQPALPAPGAQPPVIPQAQ-P 700

Query: 112 GMGSLGAMGQPMS 124
                G +  P++
Sbjct: 701 VRPPNGPLSLPVN 713



>gi|631119|pir||S39162   transcription coactivator CREB-binding protein - human
          Length = 2440

 Score =  121 bits (303), Expect = 3e-27
 Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 19/133 (14%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          +K +E  ++  A +
Sbjct: 587 GVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 646

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLG 111
           RDEY  L+A  I   +    +K ++ +       Q + G   A  A    PP  P     
Sbjct: 647 RDEYYHLLAEKIYKIQKELEEKRRSRLHK-----QGILGNQPALPAPGAQPPVIPQAQ-S 700

Query: 112 GMGSLGAMGQPMS 124
                G +  P++
Sbjct: 701 VRPPNGPLSLPVN 713



>gi|737920|prf||1923401A   protein CBP
          Length = 2441

 Score =  119 bits (300), Expect = 6e-27
 Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 19/133 (14%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          +K +E  ++  A +
Sbjct: 586 GVRKGWHERVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 645

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLG 111
           RDEY  L+A  I   +    +K +  +       Q + G   A  A    PP  P     
Sbjct: 646 RDEYYHLLAEKIYKIQKELEEKRRTRLHK-----QGILGNQPALPASGAQPPVIPPAQ-S 699

Query: 112 GMGSLGAMGQPMS 124
                G +  P++
Sbjct: 700 VRPPNGPLPLPVN 712



>gi|1345703|sp|P45481|CBP_MOUSE   CREB-binding protein
 gi|481698|pir||S39161   CREB-binding protein - mouse
 gi|435855|gb|AAB28651.1|   CREB-binding protein; CBP [Mus sp.]
          Length = 2441

 Score =  119 bits (300), Expect = 6e-27
 Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 19/133 (14%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          +K +E  ++  A +
Sbjct: 586 GVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 645

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLG 111
           RDEY  L+A  I   +    +K +  +       Q + G   A  A    PP  P     
Sbjct: 646 RDEYYHLLAEKIYKIQKELEEKRRTRLHK-----QGILGNQPALPASGAQPPVIPPAQ-S 699

Query: 112 GMGSLGAMGQPMS 124
                G +  P++
Sbjct: 700 VRPPNGPLPLPVN 712



>gi|19547885|gb|AAL87531.1|   CREB-binding protein [Mus musculus]
 gi|19547887|gb|AAL87532.1|   CREB-binding protein [Mus musculus]
          Length = 2429

 Score =  119 bits (299), Expect = 8e-27
 Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 19/133 (14%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          +K +E  ++  A +
Sbjct: 580 GVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 639

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLG 111
           RDEY  L+A  I   +    +K ++ +       Q + G   A  A    PP  P     
Sbjct: 640 RDEYYHLLAEKIYKIQKELEEKRRSRLHK-----QGILGNQPALPASGAQPPVIPPAQ-S 693

Query: 112 GMGSLGAMGQPMS 124
                G +  P++
Sbjct: 694 VRPPNGPLPLPVN 706



>gi|21956190|gb|AAM83255.1|AF378334_1   ARC105 [Xenopus laevis]
          Length = 754

 Score =  119 bits (299), Expect = 9e-27
 Identities = 71/102 (69%), Positives = 80/102 (78%)

Query: 27  MRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQ 86
           MRKAGVAH+KSSKDMESHVFLKAKTR+EYLSLVARLIIHFRDI NKKSQA+ +DPMNALQ
Sbjct: 1   MRKAGVAHTKSSKDMESHVFLKAKTREEYLSLVARLIIHFRDILNKKSQAAATDPMNALQ 60

Query: 87  SLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQ 128
           +LTG    G  G+GM  R  G  +G M  +  M Q M+L GQ
Sbjct: 61  NLTGTAVVGGQGMGMGVRPQGAQMGAMSGMAQMAQQMNLPGQ 102



>gi|28279616|gb|AAH45472.1|   Similar to PC2 (positive cofactor 2, multiprotein complex)
           glutamine/Q-rich-associated protein [Danio rerio]
          Length = 809

 Score =  119 bits (298), Expect = 9e-27
 Identities = 69/108 (63%), Positives = 82/108 (75%), Gaps = 7/108 (6%)

Query: 1   MDVSGQETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVA 60
           MDV G ++DWRS AFRQK+V+QIE+AMRKAG  H+KSS +MESHVF KAKTR+EYLS+VA
Sbjct: 1   MDVPGPDSDWRSPAFRQKVVAQIEEAMRKAGTGHTKSSTEMESHVFTKAKTREEYLSMVA 60

Query: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQ 108
           RLIIHFRDIH KK+Q    DP+NALQ+L      G     + PR PG 
Sbjct: 61  RLIIHFRDIH-KKAQGG-PDPINALQNL-----PGGVPGVIGPRPPGA 101



>gi|547239|gb|AAB31182.1|   p300=transcription coactivator {N-terminal} [mice, Peptide Partial,
           688 aa]
          Length = 688

 Score =  118 bits (296), Expect = 2e-26
 Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 20/128 (15%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          ++ +E  ++  A  
Sbjct: 567 GIRKQWHEDITQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVEGDMYESANN 626

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAA-GAAGIGMPPRGPGQSL 110
           R EY  L+A  I   +    +K +  +       Q++       G   +       GQ  
Sbjct: 627 RAEYYHLLAEKIYKIQKELEEKRRTRLQK-----QNMLPNAPGMGPVPMNTG-SNMGQQP 680

Query: 111 GGMGSLGA 118
            GM + G 
Sbjct: 681 TGMTTNGP 688



>gi|3037135|gb|AAC12944.1|   TPA inducible protein [Homo sapiens]
          Length = 579

 Score =  117 bits (294), Expect = 3e-26
 Identities = 101/102 (99%), Positives = 101/102 (99%)

Query: 27  MRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQ 86
           MRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQ
Sbjct: 1   MRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQ 60

Query: 87  SLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQ 128
           SLTGGPAAGAAGIGMPPRGPGQSLGGMGS GAMGQPMSLSGQ
Sbjct: 61  SLTGGPAAGAAGIGMPPRGPGQSLGGMGSFGAMGQPMSLSGQ 102



>gi|2996629|gb|AAC08447.1|   CBP [Homo sapiens]
          Length = 555

 Score =  113 bits (283), Expect = 6e-25
 Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 19/133 (14%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          +K +E  ++  A +
Sbjct: 321 GVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANS 380

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLG 111
           RDEY  L+A  I   +    +K ++ +       Q + G   A  A    PP  P     
Sbjct: 381 RDEYYHLLAEKIYKIQKELEEKRRSRLHK-----QGILGNQPALPAPGAQPPVIPQAQ-P 434

Query: 112 GMGSLGAMGQPMS 124
                G +  P++
Sbjct: 435 VRPPNGPLSLPVN 447



>gi|20891927|ref|XP_147188.1|   positive cofactor 2, multiprotein complex,
           glutamine/Q-rich-associated protein [Mus musculus]
          Length = 763

 Score =  111 bits (279), Expect = 2e-24
 Identities = 97/102 (95%), Positives = 98/102 (96%)

Query: 27  MRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQ 86
           MRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQ
Sbjct: 1   MRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQ 60

Query: 87  SLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQ 128
           SLTGGP  GAAGIGMPPRGPGQSLGGMG LGAMGQP+ LSGQ
Sbjct: 61  SLTGGPTPGAAGIGMPPRGPGQSLGGMGGLGAMGQPLPLSGQ 102



>gi|21307831|gb|AAL54859.1|   CREB-binding protein [Aplysia californica]
          Length = 2245

 Score =  111 bits (278), Expect = 2e-24
 Identities = 18/126 (14%), Positives = 33/126 (26%), Gaps = 22/126 (17%)

Query: 7   ETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKTRD 53
             DW    +   R  LV ++  A+      A  +          ++ +E  ++  A  R 
Sbjct: 502 RKDWHAQVTQDLRNHLVHKLVQAIFPTPDQATLRDSRMKNLVAYARKVEGDMYESANNRG 561

Query: 54  EYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGM 113
           +Y  L+A  I   +    +K    +                           P    G  
Sbjct: 562 QYYHLLAEKIYKIQKELEEKRIQRMK---------VQNAPNAQVPGMQGQIHPNAQNGPN 612

Query: 114 GSLGAM 119
              G  
Sbjct: 613 NVQGNA 618



>gi|482238|pir||S41033   hypothetical protein K03H1.10 - Caenorhabditis elegans  (fragment)
          Length = 316

 Score =  109 bits (274), Expect = 7e-24
 Identities = 21/140 (15%), Positives = 42/140 (30%), Gaps = 26/140 (18%)

Query: 2   DVSGQETDWRST---AFRQKLVSQIEDAMRKAGVAHSKS---------SKDMESHVFLKA 49
           +V  +  +W        R  +V ++  A+                   ++ +E  VF  A
Sbjct: 155 NVPVRTKEWHRQVTNDLRNHIVGKLVKAIC-PAPEMMNDIRLKDLNAYARKVEKEVFETA 213

Query: 50  KTRDEYLSLVARLIIHFRDIHNKKS-----QASVSDPMNALQSLTGGPAAGAAGIGMPPR 104
             R  Y  L+A  I   +    +K      Q +   P++    +           G   R
Sbjct: 214 IDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDEFARMRIDE------GGHQLR 267

Query: 105 GPGQSLGGMGSLGAMGQPMS 124
              ++     +     QP+ 
Sbjct: 268 TNQETETNRQNQSQ--QPLM 285



>gi|17554044|ref|NP_499201.1|   TAZ zinc finger and KIX domain containing protein family member
           (36.7 kD) [Caenorhabditis elegans]
 gi|25395947|pir||D88569   protein K03H1.10 [imported] - Caenorhabditis elegans
 gi|3877003|emb|CAA82940.1|   Hypothetical protein K03H1.10 [Caenorhabditis elegans]
 gi|3878179|emb|CAA82665.1|   Hypothetical protein K03H1.10 [Caenorhabditis elegans]
          Length = 322

 Score =  108 bits (271), Expect = 1e-23
 Identities = 21/140 (15%), Positives = 42/140 (30%), Gaps = 26/140 (18%)

Query: 2   DVSGQETDWRST---AFRQKLVSQIEDAMRKAGVAHSKS---------SKDMESHVFLKA 49
           +V  +  +W        R  +V ++  A+                   ++ +E  VF  A
Sbjct: 161 NVPVRTKEWHRQVTNDLRNHIVGKLVKAIC-PAPEMMNDIRLKDLNAYARKVEKEVFETA 219

Query: 50  KTRDEYLSLVARLIIHFRDIHNKKS-----QASVSDPMNALQSLTGGPAAGAAGIGMPPR 104
             R  Y  L+A  I   +    +K      Q +   P++    +           G   R
Sbjct: 220 IDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDEFARMRIDE------GGHQLR 273

Query: 105 GPGQSLGGMGSLGAMGQPMS 124
              ++     +     QP+ 
Sbjct: 274 TNQETETNRQNQSQ--QPLM 291



>gi|4139873|pdb|1KDX|A   Chain A, Kix Domain Of Mouse Cbp (Creb Binding Protein) In
          Complex With Phosphorylated Kinase Inducible Domain
          (Pkid) Of Rat Creb (Cyclic Amp Response Element Binding
          Protein), Nmr 17 Structures
          Length = 81

 Score =  105 bits (263), Expect = 1e-22
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 13/80 (16%)

Query: 6  QETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKTR 52
              W    +   R  LV ++  A+      A  K          +K +E  ++  A +R
Sbjct: 2  VRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANSR 61

Query: 53 DEYLSLVARLIIHFRDIHNK 72
          DEY  L+A  I   +    +
Sbjct: 62 DEYYHLLAEKIYKIQKELEE 81



>gi|25148761|ref|NP_741151.1|   Putative nuclear protein, nematode specific [Caenorhabditis
           elegans]
 gi|21450526|gb|AAM54164.1|U00066_6   Hypothetical protein R12B2.5b [Caenorhabditis elegans]
          Length = 777

 Score =  104 bits (261), Expect = 2e-22
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 14/118 (11%)

Query: 7   ETDWRSTAFRQKLVSQIEDAMRKAGVAHSK-----SSKDMESHVFLKAKTRDEYLSLVAR 61
           E DW S  FR+ ++ ++E  + +             ++ +E +VF K  ++DEY+  +A+
Sbjct: 3   EEDWPSPKFREHVIQRLEPELARNRQNAPNLPVPGDARQVEEYVFAKCMSKDEYMRTIAK 62

Query: 62  LIIHFRDIHNKKSQASVSDPMNALQSL------TGGPAAGAAGIGMPPRGPGQSLGGM 113
           +I     I+     A+V   +   Q         G   AG       P  P       
Sbjct: 63  VI---NAINCNSKSAAVPSVLQPSQFHSPPCTTAGNTPAGGTPGYRAPVPPDPQPTSA 117



>gi|25148756|ref|NP_741152.1|   Putative nuclear protein, nematode specific [Caenorhabditis
           elegans]
 gi|21363104|sp|Q21955|YNL5_CAEEL   Hypothetical protein R12B2.5 in chromosome III
 gi|17976542|gb|AAA50743.3|   Hypothetical protein R12B2.5a [Caenorhabditis elegans]
          Length = 780

 Score =  104 bits (260), Expect = 3e-22
 Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 17/121 (14%)

Query: 7   ETDWRSTAFRQKLVSQIEDAMRKAGVAHSK-----SSKDMESHVFLKAKTRDEYLSLVAR 61
           E DW S  FR+ ++ ++E  + +             ++ +E +VF K  ++DEY+  +A+
Sbjct: 3   EEDWPSPKFREHVIQRLEPELARNRQNAPNLPVPGDARQVEEYVFAKCMSKDEYMRTIAK 62

Query: 62  LIIHFRDIHNKKSQASVSDPMNALQS---------LTGGPAAGAAGIGMPPRGPGQSLGG 112
           +I     I+     A+V   +   Q          L G   AG       P  P      
Sbjct: 63  VI---NAINCNSKSAAVPSVLQPSQFHSPPCTTAALLGNTPAGGTPGYRAPVPPDPQPTS 119

Query: 113 M 113
            
Sbjct: 120 A 120



>gi|24461867|gb|AAN62354.1|AF506028_23   CTV.22 [Poncirus trifoliata]
          Length = 1405

 Score =  102 bits (255), Expect = 1e-21
 Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 17/130 (13%)

Query: 7   ETDWRST---AFRQKLVSQIEDA----MRKAGVAHSKSSKDM----ESHVFLKAKTRDEY 55
             DWR+      RQ++V++I D     +  +G       K +    E  ++  A ++ +Y
Sbjct: 34  TGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDY 93

Query: 56  LSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGG--M 113
           L  ++  ++        KSQ ++ + + +    +         +       GQSL     
Sbjct: 94  LRKISLKMLSM----ESKSQNAMPNSLQSNNPGSSNRPPDPGSMQNQVHNQGQSLPIPLS 149

Query: 114 GSLGAMGQPM 123
            +   + Q +
Sbjct: 150 ANQSQVRQQL 159



>gi|27881767|gb|AAH44677.1|   Similar to CREB binding protein (Rubinstein-Taybi syndrome)
           [Xenopus laevis]
          Length = 1047

 Score =  102 bits (254), Expect = 1e-21
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 16/131 (12%)

Query: 5   GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLKAKT 51
           G    W    +   R  LV ++  A+      A  K          ++ +E  ++  A +
Sbjct: 576 GVRKAWHEHVTQDLRNHLVHKLVQAIFPTPDPAALKDRRMENLVAYARKVEGDMYESANS 635

Query: 52  RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGP--GQS 109
           RDEY   +A  I   +    +K ++ +      + S     A GA    +    P  GQ+
Sbjct: 636 RDEYYHFLAEKIYKIQKELEEKRRSRLQK-QGIMSSQAPLQAPGAQPTALTQTSPALGQT 694

Query: 110 LGGMGSLGAMG 120
                + G + 
Sbjct: 695 QPVRPTNGPIS 705



>gi|31204369|ref|XP_311133.1|   ENSANGP00000004748 [Anopheles gambiae]
 gi|30178093|gb|EAA06516.2|   ENSANGP00000004748 [Anopheles gambiae str. PEST]
          Length = 2572

 Score =  100 bits (249), Expect = 5e-21
 Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 14/91 (15%)

Query: 3   VSGQ-ETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKS---------SKDMESHVFLK 48
           V  Q   DW    +   R  LV ++  A+      +             +K +E  ++  
Sbjct: 737 VPVQGTKDWHHSVTPDLRNHLVHKLVQAIFPSPDPSAMFDKRMYNLVAYAKKVEGDMYEM 796

Query: 49  AKTRDEYLSLVARLIIHFRDIHNKKSQASVS 79
           A +R EY  L+A  I   +    +K Q    
Sbjct: 797 ANSRSEYYHLLAEKIYKIQKELEEKRQKRKE 827



>gi|19920468|ref|NP_608528.1|   CG4184-PA [Drosophila melanogaster]
 gi|5052530|gb|AAD38595.1|AF145620_1   BcDNA.GH03922 [Drosophila melanogaster]
 gi|7296198|gb|AAF51490.1|   CG4184-PA [Drosophila melanogaster]
          Length = 749

 Score = 98.7 bits (245), Expect = 2e-20
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 23/116 (19%)

Query: 7   ETDWRSTAFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVARLIIHF 66
             DW+S  FRQ ++S+I D +       +K++  ME+H+F K++T+DEYL LVA+L +H+
Sbjct: 2   TEDWQSQKFRQNVISKIHDLLPPNAQDQTKNAGVMENHIFRKSRTKDEYLGLVAKLFMHY 61

Query: 67  RDIHNKK---------------------SQASVSDPMNALQSLT--GGPAAGAAGI 99
           +D+  K                       Q  + DP+NALQ+L   G        +
Sbjct: 62  KDMSRKSQQQQQQQQQQGGPPPNAEMGGGQNMMQDPLNALQNLASQGNRNPQMMPM 117



>gi|17508323|ref|NP_493339.1|   KIX domain containing protein family member (80.3 kD)
           [Caenorhabditis elegans]
 gi|7505888|pir||T23651   hypothetical protein M01E5.6 - Caenorhabditis elegans
 gi|3878635|emb|CAB07643.1|   Hypothetical protein M01E5.6 [Caenorhabditis elegans]
 gi|3879438|emb|CAB03290.1|   Hypothetical protein M01E5.6 [Caenorhabditis elegans]
          Length = 702

 Score = 98.0 bits (243), Expect = 3e-20
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 15/101 (14%)

Query: 6   QETDWRSTAFRQKLVSQIEDAM--RKAGVAHSK---------SSKDMESHVFLKAKTRDE 54
              +W     R  +V ++  A   R   V             +++  E+ +   +  RDE
Sbjct: 598 TSKEWIVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASNDRDE 657

Query: 55  YLSLVARLIIHFRDIHNKKSQASV----SDPMNALQSLTGG 91
           Y  L+   +        KK Q +       P  +   L   
Sbjct: 658 YYRLMQLTVDQILKKTLKKDQRATEHNHQQPTQSSDELAKN 698



>gi|22329593|ref|NP_173031.2|   expressed protein [Arabidopsis thaliana]
 gi|25513497|pir||C86292   F7H2.13 protein - Arabidopsis thaliana
 gi|8927658|gb|AAF82149.1|AC034256_13   ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene.
           [Arabidopsis thaliana]
 gi|12083256|gb|AAG48787.1|AF332424_1   unknown protein [Arabidopsis thaliana]
          Length = 179

 Score = 95.3 bits (236), Expect = 2e-19
 Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 23/122 (18%)

Query: 5   GQETDWRST---AFRQKLVSQIEDA----MRKAGVAHSKSSKDM----ESHVFLKAKTRD 53
               DWR+    A R ++V++I +     +       +   + +    E  +F  A  + 
Sbjct: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61

Query: 54  EYLSLVARLIIHFRDIHNKKSQASVSD--------PMNALQSLTGGPAAGAAGIGMPPRG 105
           EYL  +   +++       KSQ +           P+    S+     A   G     + 
Sbjct: 62  EYLRQICMKMLNM----ETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQP 117

Query: 106 PG 107
             
Sbjct: 118 QD 119




 Score = 49.8 bits (118), Expect = 9e-06
 Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 11/73 (15%)

Query: 5   GQETDWRS---TAFRQKLVSQIEDAMRK----AGVAHSKSSKDM----ESHVFLKAKTRD 53
               DWR+      RQK ++ + D ++K    +G         +    E  +F  A  ++
Sbjct: 107 VNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQE 166

Query: 54  EYLSLVARLIIHF 66
           +YL  ++  +   
Sbjct: 167 DYLGKISLKMRTM 179



>gi|7511830|pir||T13828   CREB-binding protein homolog - fruit fly (Drosophila melanogaster)
 gi|1916930|gb|AAB53050.1|   CREB-binding protein homolog [Drosophila melanogaster]
          Length = 3190

 Score = 94.9 bits (235), Expect = 2e-19
 Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 13/103 (12%)

Query: 5    GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKSSK---------DMESHVFLKAKT 51
              E DWR   +   R  LV ++  A+   +     +  +          +E  ++  AK+
Sbjct: 938  DNEKDWRESVTADLRNHLVHKLVQAIFPTSDPTTMQDKRMHNLVSYAEKVEKDMYEMAKS 997

Query: 52   RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAA 94
            R EY  L+A  I   +    +K           L    G    
Sbjct: 998  RSEYYHLLAEKIYKIQKELEEKRLKRKEQHQQMLMQQQGVANP 1040



>gi|7506661|pir||T16726   hypothetical protein R12B2.5 - Caenorhabditis elegans
          Length = 760

 Score = 93.7 bits (232), Expect = 5e-19
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 12/128 (9%)

Query: 7   ETDWRSTAFRQKLVSQIEDAMRKAGVAHSK-----SSKDMESHVFLKAKTRDEYLSLVAR 61
           E DW S  FR+ ++ ++E  + +             ++ +E +VF K  ++DEY+  +A+
Sbjct: 3   EEDWPSPKFREHVIQRLEPELARNRQNAPNLPVPGDARQVEEYVFAKCMSKDEYMRTIAK 62

Query: 62  LIIHFRDIHNKKSQASVSDPMNALQSLTGG-PAAGAAGIGMPPRGPGQSLGGMGSL-GAM 119
           +I     I+     A+V   +   Q  +     A         R P   +    +     
Sbjct: 63  VI---NAINCNSKSAAVPSVLQPSQFHSPPCTTADPQPTSAQARNP--PVTVATTQASTT 117

Query: 120 GQPMSLSG 127
               +  G
Sbjct: 118 PSAPNPPG 125



>gi|24640865|ref|NP_524642.2|   nejire CG15319-PB [Drosophila melanogaster]
 gi|22833041|gb|AAF46516.2|   CG15319-PB [Drosophila melanogaster]
          Length = 3276

 Score = 93.3 bits (231), Expect = 6e-19
 Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 13/103 (12%)

Query: 5    GQETDWR---STAFRQKLVSQIEDAM-RKAGVAHSKSSK---------DMESHVFLKAKT 51
              E DWR   +   R  LV ++  A+   +     +  +          +E  ++  AK+
Sbjct: 938  DNEKDWRESVTADLRNHLVHKLVQAIFPTSDPTTMQDKRMHNLVSYAEKVEKDMYEMAKS 997

Query: 52   RDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAA 94
            R EY  L+A  I   +    +K           L    G    
Sbjct: 998  RSEYYHLLAEKIYKIQKELEEKRLKRKEQHQQMLMQQQGVANP 1040



>gi|15218294|ref|NP_173030.1|   expressed protein [Arabidopsis thaliana]
          Length = 1335

 Score = 91.8 bits (227), Expect = 2e-18
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 23/130 (17%)

Query: 7   ETDWRST---AFRQKLVSQIEDA----MRKAGVAHSKSSKDM----ESHVFLKAKTRDEY 55
             DWR+      RQK+V++I +     +  +G       + +    E  +F  A  + +Y
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78

Query: 56  LSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGG--M 113
           L  ++  ++        KSQ +               A     I   P   GQ L G   
Sbjct: 79  LRKISMKMLTM----ETKSQNAAGSSAAIP------AANNGTSIDSIPTNQGQLLPGSLS 128

Query: 114 GSLGAMGQPM 123
            +     QP+
Sbjct: 129 TNQSQAPQPL 138



>gi|17567279|ref|NP_509376.1|   KIX domain containing protein family member [Caenorhabditis
           elegans]
 gi|7499689|pir||T16139   hypothetical protein F22F1.3 - Caenorhabditis elegans
 gi|1118044|gb|AAA83283.1|   Hypothetical protein F22F1.3 [Caenorhabditis elegans]
          Length = 295

 Score = 87.2 bits (215), Expect = 4e-17
 Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 10/77 (12%)

Query: 15  FRQKLVSQIE-DAMRKAGVAHSKSSKD---------MESHVFLKAKTRDEYLSLVARLII 64
            RQ ++++I  +A+ +        ++          ME   F K +T+DEY + +AR+I+
Sbjct: 70  LRQYMITKIVREAVPRPNSDAKNDARMIELKEYATFMEKKSFEKVQTKDEYYAELARIIL 129

Query: 65  HFRDIHNKKSQASVSDP 81
             +     + + S  DP
Sbjct: 130 SMQKHLQSRPKGSYEDP 146



>gi|24461860|gb|AAN62347.1|AF506028_14   CTV.20 [Poncirus trifoliata]
          Length = 3148

 Score = 86.0 bits (212), Expect = 1e-16
 Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 15/84 (17%)

Query: 8  TDWRST---AFRQKLVSQIEDA----MRKAGVAHSKSSKDM----ESHVFLKAKTRDEYL 56
          +DWR+      RQ++V++I D     +  +G       K +    E  +F  A ++ +YL
Sbjct: 15 SDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQSDYL 74

Query: 57 SLVARLIIHFRDIHNKKSQASVSD 80
            ++  ++        +SQ +   
Sbjct: 75 RKISLKMLSM----ESRSQNASGS 94



>gi|25511635|pir||B86292   F7H2.12 protein - Arabidopsis thaliana
 gi|8927657|gb|AAF82148.1|AC034256_12   EST gb|N38213 comes from this gene. [Arabidopsis thaliana]
          Length = 1366

 Score = 76.8 bits (188), Expect = 6e-14
 Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 54/161 (33%)

Query: 7   ETDWRST---AFRQKLVSQIEDA----MRKAGVAHSKSSKDM----ESHVFLKAKTR--- 52
             DWR+      RQK+V++I +     +  +G       + +    E  +F  A  +   
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQRFV 78

Query: 53  ----------------------------DEYLSLVARLIIHFRDIHNKKSQASVSDPMNA 84
                                        +YL  ++  ++        KSQ +       
Sbjct: 79  RQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTM----ETKSQNAAGSSAAI 134

Query: 85  LQSLTGGPAAGAAGIGMPPRGPGQSLGG--MGSLGAMGQPM 123
                   A     I   P   GQ L G    +     QP+
Sbjct: 135 P------AANNGTSIDSIPTNQGQLLPGSLSTNQSQAPQPL 169



>gi|28071313|dbj|BAC56002.1|   P0705A05.20 [Oryza sativa (japonica cultivar-group)]
          Length = 1359

 Score = 66.8 bits (162), Expect = 7e-11
 Identities = 13/81 (16%), Positives = 33/81 (40%), Gaps = 11/81 (13%)

Query: 8   TDWRST---AFRQKLVSQIEDAMRK----AGVAHSKSSKDM----ESHVFLKAKTRDEYL 56
            DWRS      R ++V++I D ++K    +        + +    E  ++  A ++ +YL
Sbjct: 35  GDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYL 94

Query: 57  SLVARLIIHFRDIHNKKSQAS 77
             ++  ++       +    +
Sbjct: 95  RKISLKMLSMETKTQQNPGNA 115



>gi|17552402|ref|NP_497144.1|   TAZ zinc finger family member [Caenorhabditis elegans]
 gi|7496697|pir||T33579   hypothetical protein C29F9.6 - Caenorhabditis elegans
 gi|3790688|gb|AAC68748.1|   Hypothetical protein C29F9.6 [Caenorhabditis elegans]
          Length = 228

 Score = 39.4 bits (91), Expect = 0.010
 Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 9/86 (10%)

Query: 4   SGQETDWRST---AFRQKLVSQIED--AMRKAGVAHS----KSSKDMESHVFLKAKTRDE 54
            G    W S      R+ ++ +I     +            + ++  E  +F  A +RDE
Sbjct: 114 PGTSQPWHSEVPKTDREAVIERISKHIMLHPQRFEPIWKIKEDARAAELQIFEAAGSRDE 173

Query: 55  YLSLVARLIIHFRDIHNKKSQASVSD 80
           Y  +V       +D   +        
Sbjct: 174 YYRMVEERAPREQDKAPEGPGQEAQK 199



>gi|1168190|sp|P42649|1432_ENTHI   14-3-3 PROTEIN 2 (14-3-3-2)
 gi|571363|gb|AAA80186.1|   14-3-3-2 protein
          Length = 238

 Score = 38.2 bits (88), Expect = 0.025
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 14  AFRQKLVSQIEDAMRKAGVAHSKSSKDMESHVFLKAKTRDEYLSLVAR-LIIHFRDIHNK 72
              Q+L  + +D ++       K+S  +ES VF K     +Y    A   +   R     
Sbjct: 88  KIEQELSQKCDDVLKIITEFLLKNSTSIESKVFFKKM-EGDYYRYYAEFTVDEKRKEVAD 146

Query: 73  KSQASVSDPMNALQSLTGGPA 93
           KS A+  +  +   SL     
Sbjct: 147 KSLAAYQEATDTAASLVPTHP 167



>gi|22986944|ref|ZP_00032031.1|   hypothetical protein [Burkholderia fungorum]
          Length = 1049

 Score = 37.9 bits (87), Expect = 0.030
 Identities = 14/45 (31%), Positives = 14/45 (31%), Gaps = 2/45 (4%)

Query: 84  ALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQ 128
             Q  T     G  G   P   PGQ        G  G P S  GQ
Sbjct: 628 PGQPGTPSSPPGQPG--TPSSPPGQPGTPSSPPGQPGTPSSPPGQ 670




 Score = 37.9 bits (87), Expect = 0.033
 Identities = 14/45 (31%), Positives = 14/45 (31%), Gaps = 2/45 (4%)

Query: 84  ALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQ 128
             Q  T     G  G   P   PGQ        G  G P S  GQ
Sbjct: 638 PGQPGTPSSPPGQPG--TPSSPPGQPGTPSSPPGQPGAPSSPPGQ 680




 Score = 37.9 bits (87), Expect = 0.034
 Identities = 15/56 (26%), Positives = 15/56 (26%), Gaps = 8/56 (14%)

Query: 81  PMNALQSLTGGPAAG--AAGI------GMPPRGPGQSLGGMGSLGAMGQPMSLSGQ 128
           P   L   T     G            G P   PGQ        G  G P S  GQ
Sbjct: 595 PTVPLSPATPSSPPGEPGTPSSPPGEPGTPSSPPGQPGTPSSPPGQPGTPSSPPGQ 650



>gi|7487910|pir||T01055   hypothetical protein YUP8H12R.38 - Arabidopsis thaliana
 gi|3152587|gb|AAC17068.1|   Similar to CREB-binding protein homolog gb|U88570 from D.
           melanogaster and contains similarity to
           callus-associated protein gb|U01961 from Nicotiana
           tabacum.  EST gb|W43427 comes from this gene.
           [Arabidopsis thaliana]
          Length = 1516

 Score = 36.7 bits (84), Expect = 0.077
 Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 13  TAFRQKLVSQIEDAMRKAGVAHSKS-----SKDMESHVFLKAKTRDEYL-------SLVA 60
            A R ++ + ++          SK+     ++ +E  +F  A T+++Y+        L +
Sbjct: 53  QAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRLAS 112

Query: 61  RLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGS 115
              I  R ++N   + + S  +  +    G   +G     M       ++ G  +
Sbjct: 113 L--IKGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNPNLMITSSGDATMAGSNN 165



>gi|18412221|ref|NP_565197.1|   p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana]
 gi|12597461|gb|AAG60059.1|   p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana]
          Length = 1654

 Score = 35.9 bits (82), Expect = 0.11
 Identities = 19/114 (16%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 13  TAFRQKLVSQIEDAMRKAGVAHSKS-----SKDMESHVFLKAKTRDEYLS------LVAR 61
            A R ++ + ++          SK+     ++ +E  +F  A T+++Y++       +A 
Sbjct: 53  QAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRLAS 112

Query: 62  LIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGS 115
           LI   R ++N   + + S  +  +    G   +G     M       ++ G  +
Sbjct: 113 LI-KGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNPNLMITSSGDATMAGSNN 165



>gi|1228035|dbj|BAA12105.1|   The KIAA0191 gene is expressed ubiquitously.~The KIAA0191 protein
            retains the C2H2 zinc-finger at its N-terminal region.
            [Homo sapiens]
          Length = 1516

 Score = 35.9 bits (82), Expect = 0.12
 Identities = 10/60 (16%), Positives = 18/60 (30%), Gaps = 1/60 (1%)

Query: 68   DIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG-QPMSLS 126
             I    SQ      +   Q     P      +   P+ P      M ++G +   P+ + 
Sbjct: 1314 AITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIP 1373



>gi|27480017|ref|XP_038288.7|   similar to The KIAA0191 gene is expressed ubiquitously.~The KIAA0191
            protein retains the C2H2 zinc-finger at its N-terminal
            region. [Homo sapiens]
          Length = 1640

 Score = 35.6 bits (81), Expect = 0.14
 Identities = 10/60 (16%), Positives = 18/60 (30%), Gaps = 1/60 (1%)

Query: 68   DIHNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMG-QPMSLS 126
             I    SQ      +   Q     P      +   P+ P      M ++G +   P+ + 
Sbjct: 1438 AITQPSSQPGSQPKLGPPQQGAQPPHQVQMPLYNFPQSPPAQYSPMHNMGLLPMHPLQIP 1497



>gi|19074594|ref|NP_586100.1|   MADS domain [Encephalitozoon cuniculi]
 gi|19069236|emb|CAD25704.1|   MADS domain [Encephalitozoon cuniculi]
          Length = 776

 Score = 34.4 bits (78), Expect = 0.35
 Identities = 10/72 (13%), Positives = 33/72 (45%), Gaps = 7/72 (9%)

Query: 12 STAFRQKLVSQIEDAMRKAG------VAHSKSSK-DMESHVFLKAKTRDEYLSLVARLII 64
          S   R++++ ++  A++++           K +    E  ++ ++ +++EYL  +     
Sbjct: 3  SQEERKQMILKLFVALKESNIFPGYTPVQIKEAAIRAEQRIYEESGSKEEYLRGMDERFQ 62

Query: 65 HFRDIHNKKSQA 76
              + + +S+A
Sbjct: 63 RIERVVSNRSRA 74



>gi|28828236|gb|AAO50913.1|   similar to putative protein; protein id: At3g44340.1, supported by
           cDNA: gi_11229585 [Arabidopsis thaliana] [Dictyostelium
           discoideum]
          Length = 1150

 Score = 34.4 bits (78), Expect = 0.35
 Identities = 10/49 (20%), Positives = 12/49 (24%), Gaps = 5/49 (10%)

Query: 76  ASVSDPMNALQSLTGG--PAAGAAGIGMPP---RGPGQSLGGMGSLGAM 119
            S+S P      +T          G   PP      G       S   M
Sbjct: 177 NSLSSPTQPPPPITNNTSAPPQPTGYSQPPPMTNNTGYQQTTNTSQPPM 225



>gi|18025476|gb|AAK95420.1|   BPLF1 [cercopithicine herpesvirus 15]
          Length = 3105

 Score = 34.4 bits (78), Expect = 0.35
 Identities = 10/52 (19%), Positives = 13/52 (25%), Gaps = 1/52 (1%)

Query: 74  SQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSL 125
            QA+   P    Q+ T  P    A    P      +        A   P   
Sbjct: 511 PQAATPTP-QPPQAATPTPQPPQAATPTPQPPQAATPTPQPPQAATPTPQPP 561




 Score = 34.4 bits (78), Expect = 0.35
 Identities = 10/52 (19%), Positives = 13/52 (25%), Gaps = 1/52 (1%)

Query: 74  SQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSL 125
            QA+   P    Q+ T  P    A    P      +        A   P   
Sbjct: 501 PQAATPTP-QPPQAATPTPQPPQAATPTPQPPQAATPTPQPPQAATPTPQPP 551



>gi|22902403|gb|AAH37667.1|   Similar to RIKEN cDNA 1110025J15 gene [Mus musculus]
          Length = 320

 Score = 34.4 bits (78), Expect = 0.35
 Identities = 7/43 (16%), Positives = 8/43 (18%)

Query: 79  SDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQ 121
             P         G   G +         G    G    G   Q
Sbjct: 16  QAPFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYPQGPYPQ 58



>gi|1711284|dbj|BAA13994.1|   choriogenin H [Oryzias latipes]
          Length = 591

 Score = 34.4 bits (78), Expect = 0.38
 Identities = 7/61 (11%), Positives = 9/61 (14%), Gaps = 7/61 (11%)

Query: 73  KSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQ-------PMSL 125
           K Q     P N                  P               +  Q       P + 
Sbjct: 61  KPQNPPQKPSNPQYPSYPQTPQNPQVPQNPQVPQNPQYPSYPQNPSYPQNPSYPQYPSNP 120

Query: 126 S 126
            
Sbjct: 121 P 121



>gi|23015571|ref|ZP_00055343.1|   hypothetical protein [Magnetospirillum magnetotacticum]
          Length = 328

 Score = 34.0 bits (77), Expect = 0.40
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 13/115 (11%)

Query: 19  LVSQIEDAMRKAGVAHSKSS-----KDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKK 73
           + S++ED +        + +       +E   F  A+   +   + A L + F+D+   +
Sbjct: 72  MASRLEDRI-----NELEDANRFLTGKIEEANFKAAQLNKQIERMQADLDLRFKDLEAAR 126

Query: 74  ---SQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSL 125
              S A+    ++   +         A + +PP+G         + G    P +L
Sbjct: 127 GGQSSAAQPQSVSMPAASVPATNPNGAPVLIPPKGVKAGANSADNDGPAPGPQNL 181



>gi|15077063|gb|AAK83050.1|AF287985_1   synapsin isoform 8.2 [Aplysia californica]
          Length = 513

 Score = 34.0 bits (77), Expect = 0.42
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 52  RDEYLSLVARLII-HFRDIHNKKSQASVSDPMN--ALQSLTGGPAAGAAGIGM---PPRG 105
           ++E   L+A L++   + +  K  Q S+S   +  A+     G  +G          PR 
Sbjct: 376 QEEDRRLIAELVLAKMQAM-CKPVQTSMSKATSSGAIMHQVNGSHSGPQAGLRSSHAPRK 434

Query: 106 PGQ---SLGGMGSLGAM 119
           PGQ     GG    G M
Sbjct: 435 PGQGRGHDGGPPPQGPM 451



>gi|15077059|gb|AAK83048.1|AF287983_1   synapsin isoform 2.1 [Aplysia californica]
          Length = 508

 Score = 34.0 bits (77), Expect = 0.44
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 52  RDEYLSLVARLII-HFRDIHNKKSQASVSDPMN--ALQSLTGGPAAGAAGIGM---PPRG 105
           ++E   L+A L++   + +  K  Q S+S   +  A+     G  +G          PR 
Sbjct: 371 QEEDRRLIAELVLAKMQAM-CKPVQTSMSKATSSGAIMHQVNGSHSGPQAGLRSSHAPRK 429

Query: 106 PGQ---SLGGMGSLGAM 119
           PGQ     GG    G M
Sbjct: 430 PGQGRGHDGGPPPQGPM 446



>gi|21450271|ref|NP_659141.1|   hypothetical protein MGC28864 [Mus musculus]
 gi|28380077|sp|Q91W39|NCO5_MOUSE   Nuclear receptor coactivator 5 (NCoA-5) (Coactivator independent of
           AF-2) (CIA)
 gi|16877839|gb|AAH17152.1|   hypothetical protein MGC28864 [Mus musculus]
          Length = 579

 Score = 34.0 bits (77), Expect = 0.47
 Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 70  HNKKSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMS 124
           +   S A+ S P    Q+ +G       G     R  G    G  S G  GQP S
Sbjct: 462 NQNFSTAANSQPQQRPQA-SGNQPPNIVGQAGSARNMGPR-PGAPSQGLFGQPSS 514



>gi|28918768|gb|EAA28438.1|   hypothetical protein [Neurospora crassa]
          Length = 2097

 Score = 34.0 bits (77), Expect = 0.49
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 7/101 (6%)

Query: 25   DAMRKAGVAHSKSS---KDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDP 81
            DA+ K      K++   +  ES   ++ +T+DE   L A   +  +      +       
Sbjct: 1630 DAIVKQRSEKMKTALNKRLAESKEAMEKQTQDERQKLQAEYDLKLQQEL---AILKAEQQ 1686

Query: 82   MNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQP 122
                Q+      A         + PG    G+  L  +   
Sbjct: 1687 SGVSQNGVPATPAKP-PTAQTAQTPGAGTPGLPDLANLTDQ 1726



>gi|15077057|gb|AAK83047.1|AF287982_1   synapsin isoform 11.1 [Aplysia californica]
          Length = 495

 Score = 34.0 bits (77), Expect = 0.50
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 52  RDEYLSLVARLII-HFRDIHNKKSQASVSDPMN--ALQSLTGGPAAGAAGIGM---PPRG 105
           ++E   L+A L++   + +  K  Q S+S   +  A+     G  +G          PR 
Sbjct: 358 QEEDRRLIAELVLAKMQAM-CKPVQTSMSKATSSGAIMHQVNGSHSGPQAGLRSSHAPRK 416

Query: 106 PGQ---SLGGMGSLGAM 119
           PGQ     GG    G M
Sbjct: 417 PGQGRGHDGGPPPQGPM 433



>gi|15077061|gb|AAK83049.1|AF287984_1   synapsin isoform 7.1 [Aplysia californica]
          Length = 500

 Score = 33.6 bits (76), Expect = 0.51
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 52  RDEYLSLVARLII-HFRDIHNKKSQASVSDPMN--ALQSLTGGPAAGAAGIGM---PPRG 105
           ++E   L+A L++   + +  K  Q S+S   +  A+     G  +G          PR 
Sbjct: 363 QEEDRRLIAELVLAKMQAM-CKPVQTSMSKATSSGAIMHQVNGSHSGPQAGLRSSHAPRK 421

Query: 106 PGQ---SLGGMGSLGAM 119
           PGQ     GG    G M
Sbjct: 422 PGQGRGHDGGPPPQGPM 438



>gi|22093906|gb|AAM91820.1|AF396668_1   choriogenin H [Oryzias latipes]
          Length = 670

 Score = 33.6 bits (76), Expect = 0.56
 Identities = 7/61 (11%), Positives = 9/61 (14%), Gaps = 7/61 (11%)

Query: 73  KSQASVSDPMNALQSLTGGPAAGAAGIGMPPRGPGQSLGGMGSLGAMGQ-------PMSL 125
           K Q     P N                  P               +  Q       P + 
Sbjct: 61  KPQNPPQKPSNPQYPSYPQTPQNPQVPQNPQVPQNPQYPSYPQNPSYPQNPSYPQYPSNP 120

Query: 126 S 126
            
Sbjct: 121 P 121



>gi|27731125|ref|XP_238784.1|   hypothetical protein XP_238784 [Rattus norvegicus]
          Length = 301

 Score = 33.6 bits (76), Expect = 0.63
 Identities = 8/70 (11%), Positives = 17/70 (24%), Gaps = 6/70 (8%)

Query: 57  SLVARLIIHFRDIHNKKSQASVSDPMNALQ----SLTGGPAAGAAGIGMPPRGPGQSLGG 112
           S++ RL+     I   + + +  DP         +                    +   G
Sbjct: 219 SILPRLVYSSAWITQGRKRNA--DPQQGPPTNRTAHRQDRPPTGPPTDRTAHQQDRPPTG 276

Query: 113 MGSLGAMGQP 122
             +     Q 
Sbjct: 277 PPTNRTAHQQ 286



>gi|28919377|gb|EAA28825.1|   hypothetical protein [Neurospora crassa]
          Length = 1598

 Score = 32.9 bits (74), Expect = 0.98
 Identities = 15/55 (27%), Positives = 22/55 (40%)

Query: 44   HVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAG 98
             +F  A T DE  S + R +     + + K QA +      LQ+L G      A 
Sbjct: 1192 KLFDSATTMDEVWSKIPRAVEQIMKMASTKYQAILDKQHQPLQALGGVADQTGAP 1246



>gi|28917628|gb|EAA27323.1|   hypothetical protein [Neurospora crassa]
          Length = 1577

 Score = 32.9 bits (74), Expect = 1.00
 Identities = 15/55 (27%), Positives = 22/55 (40%)

Query: 44   HVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGGPAAGAAG 98
             +F  A T DE  S + R +     + + K QA +      LQ+L G      A 
Sbjct: 1171 KLFDSATTMDEVWSKIPRAVEQIMKMASTKYQAILDKQHQPLQALGGVADQTGAP 1225






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Jul 1, 2003  3:46 AM
  Number of letters in database: 469,658,079
  Number of sequences in database:  1,463,011
  
Lambda     K      H
   0.318    0.159    0.404 

Gapped
Lambda     K      H
   0.267   0.0485    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,042,989
Number of Sequences: 1463011
Number of extensions: 5766251
Number of successful extensions: 79275
Number of sequences better than  1.0: 250
Number of HSP's better than  1.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 466
Number of HSP's that attempted gapping in prelim test: 67787
Number of HSP's gapped (non-prelim): 7664
length of query: 128
length of database: 469,658,079
effective HSP length: 104
effective length of query: 24
effective length of database: 317,504,935
effective search space: 7620118440
effective search space used: 7620118440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)