################################### Hits in At1g15790 with E < 0.01 ######SEQUENCE MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS RQKNINALLDTLKKIVPHSGKEGIDELM ######COMMAND blastpgp -i At1g15790 -F T -j 10 -a 4 -h 0.005 -e 10 -d nr ######HIT_SUMMARY HSP__Pos in Q_________________Subject__________________from species_______Pos in S___E-value___ 1 1 .. 148 NP_173031.2| expressed protein [Arabidop Arabidopsis tha 1 .. 148 E= 2.0e-73 2 4 .. 74 NP_173031.2| expressed protein [Arabidop Arabidopsis tha 109 .. 179 E= 1.0e-09 1 4 .. 118 NP_173030.1| expressed protein [Arabidop Arabidopsis tha 19 .. 133 E= 2.0e-26 2 98 .. 147 NP_173030.1| expressed protein [Arabidop Arabidopsis tha 8 .. 57 E= 3.0e-11 1 4 .. 118 B86292 F7H2.12 protein - Arabidopsis tha Arabidopsis tha 19 .. 164 E= 9.0e-22 2 98 .. 147 B86292 F7H2.12 protein - Arabidopsis tha Arabidopsis tha 8 .. 57 E= 3.0e-11 1 6 .. 93 AAN62347.1|AF506028_14 CTV.20 [Poncirus Poncirus trifol 16 .. 98 E= 5.0e-21 2 107 .. 147 AAN62347.1|AF506028_14 CTV.20 [Poncirus Poncirus trifol 12 .. 52 E= 2.0e-04 1 5 .. 93 BAC56002.1| P0705A05.20 [Oryza sativa (j Oryza sativa (j 35 .. 123 E= 1.0e-19 2 76 .. 147 BAC56002.1| P0705A05.20 [Oryza sativa (j Oryza sativa (j 12 .. 72 E= 6.0e-04 1 4 .. 90 AAN62354.1|AF506028_23 CTV.22 [Poncirus Poncirus trifol 34 .. 120 E= 6.0e-19 2 98 .. 147 AAN62354.1|AF506028_23 CTV.22 [Poncirus Poncirus trifol 23 .. 72 E= 8.0e-07 1 6 .. 69 BAC45101.1| OJ1705_C03.23 [Oryza sativa Oryza sativa (j 12 .. 75 E= 1.0e-07 1 7 .. 84 T18235 transcription activator GAL11 hom Candida albican 23 .. 100 E= 8.0e-04 1 24 .. 60 BAC45102.1| OJ1705_C03.24 [Oryza sativa Oryza sativa (j 39 .. 75 E= 2.0e-06 1 6 .. 61 NP_178842.1| hypothetical protein [Arabi Arabidopsis tha 24 .. 76 E= 7.0e-04 1 10 .. 140 NP_643335.1| transcriptional regulator [ Xanthomonas axo 319 .. 438 E= 9.0e-03 ***** 17 Number of hits for At1g15790 below with E-value < 0.01 : 17 ######RAW OUTPUT BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= At1g15790 (148 letters) Database: /local/data/sequences/fasta/nr 1,459,938 sequences; 468,778,868 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value ref|NP_173031.2| expressed protein [Arabidopsis thaliana] >gi|25... 274 2e-73 ref|NP_173030.1| expressed protein [Arabidopsis thaliana] 118 2e-26 pir||B86292 F7H2.12 protein - Arabidopsis thaliana >gi|8927657|g... 102 9e-22 gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 100 5e-21 dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-gro... 95 1e-19 gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 93 6e-19 dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-g... 37 0.053 pir||T18235 transcription activator GAL11 homolog - yeast (Candi... 33 0.53 ref|XP_163726.1| hypothetical protein XP_163726 [Mus musculus] 32 1.4 dbj|BAB15155.1| unnamed protein product [Homo sapiens] 32 1.6 gb|EAA19738.1| hypothetical protein [Plasmodium yoelii yoelii] 32 2.0 ref|XP_218613.1| similar to sialic acid-binding lectin Siglec-F ... 31 3.0 ref|NP_843064.1| lipoprotein, putative [Bacillus anthracis str. ... 31 3.3 gb|AAM54150.1|AC104616_9 hypothetical protein [Oryza sativa (jap... 31 3.7 ref|NP_654458.1| hypothetical protein predicted by GeneMark [Bac... 31 4.1 ref|NP_613087.1| hoar [Mamestra configurata nucleopolyhedrovirus... 30 4.5 emb|CAD98067.1| hypothetical protein [Homo sapiens] 30 4.7 ref|NP_603806.1| DNA repair protein radC [Fusobacterium nucleatu... 30 4.9 gb|EAA19170.1| hypothetical protein [Plasmodium yoelii yoelii] 30 5.2 ref|XP_132700.3| nuclear receptor subfamily 2, group C, member 2... 30 5.4 ref|NP_833581.1| Serine/threonine protein kinase [Bacillus cereu... 30 5.7 ref|NP_266159.1| subunit B of ATP-dependent exonuclease [Lactoco... 30 5.7 ref|XP_319745.1| ENSANGP00000006359 [Anopheles gambiae] >gi|2130... 30 6.3 ref|NP_059019.1| TR4 orphan receptor; orphan receptor, TR4 [Ratt... 30 7.0 ref|NP_524762.1| rugose CG6775-PA [Drosophila melanogaster] >gi|... 30 7.2 sp|P49117|TR4_MOUSE Orphan nuclear receptor TR4 (Orphan nuclear ... 30 7.5 ref|ZP_00124232.1| hypothetical protein [Pseudomonas syringae pv... 30 7.7 ref|NP_726978.1| rugose CG6775-PB [Drosophila melanogaster] >gi|... 30 7.8 pir||I54075 gene mTR2R1 protein - mouse >gi|912822|gb|AAB33314.1... 30 8.4 sp|Q57408|HGP4_HAEIN Probable hemoglobin and hemoglobin-haptoglo... 30 8.6 ref|NP_044842.1| unknown [murid herpesvirus 4] >gi|1888433|emb|C... 30 9.2 >ref|NP_173031.2| expressed protein [Arabidopsis thaliana] pir||C86292 F7H2.13 protein - Arabidopsis thaliana gb|AAF82149.1|AC034256_13 ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene. [Arabidopsis thaliana] gb|AAG48787.1|AF332424_1 unknown protein [Arabidopsis thaliana] Length = 179 Score = 274 bits (701), Expect = 2e-73 Identities = 148/148 (100%), Positives = 148/148 (100%) Query: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ Sbjct: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 Query: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS Sbjct: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 Query: 121 RQKNINALLDTLKKIVPHSGKEGIDELM 148 RQKNINALLDTLKKIVPHSGKEGIDELM Sbjct: 121 RQKNINALLDTLKKIVPHSGKEGIDELM 148 Score = 62.4 bits (150), Expect = 1e-09 Identities = 34/71 (47%), Positives = 47/71 (65%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ P SR + +N +++T K +P EG +EL +IAV EE +FN+A NQ +Y Sbjct: 109 TGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQEDY 168 Query: 64 LRQICMKMLNM 74 L +I +KM M Sbjct: 169 LGKISLKMRTM 179 >ref|NP_173030.1| expressed protein [Arabidopsis thaliana] Length = 1335 Score = 118 bits (295), Expect = 2e-26 Identities = 69/115 (60%), Positives = 79/115 (68%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQT+Y Sbjct: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQ 118 LR+I MKML METKSQNAAGSS+A S+P N+ + G T Q Q Sbjct: 79 LRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPTNQGQLLPGSLSTNQSQ 133 Score = 67.4 bits (163), Expect = 3e-11 Identities = 33/50 (66%), Positives = 42/50 (84%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL Sbjct: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINEL 57 >pir||B86292 F7H2.12 protein - Arabidopsis thaliana gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene. [Arabidopsis thaliana] Length = 1366 Score = 102 bits (255), Expect = 9e-22 Identities = 69/146 (47%), Positives = 79/146 (53%), Gaps = 31/146 (21%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ--- 60 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQ Sbjct: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQRFV 78 Query: 61 ----------------------------TEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92 T+YLR+I MKML METKSQNAAGSS+A Sbjct: 79 RQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTMETKSQNAAGSSAAIPAAN 138 Query: 93 PLVPEPSVPNNEPAVNTGDWRTQQPQ 118 S+P N+ + G T Q Q Sbjct: 139 NGTSIDSIPTNQGQLLPGSLSTNQSQ 164 Score = 67.8 bits (164), Expect = 3e-11 Identities = 33/50 (66%), Positives = 42/50 (84%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL Sbjct: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINEL 57 >gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] Length = 3148 Score = 100 bits (248), Expect = 5e-21 Identities = 50/88 (56%), Positives = 66/88 (74%), Gaps = 5/88 (5%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DWR SR RIVNKIM+T + LPF PEG NEL++IA RFEEK+F +A++Q++YLR Sbjct: 16 DWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQSDYLR 75 Query: 66 QICMKMLNMETKSQNAAGSSSADDNTPP 93 +I +KML+ME++SQNA+GS N PP Sbjct: 76 KISLKMLSMESRSQNASGS-----NEPP 98 Score = 44.7 bits (104), Expect = 2e-04 Identities = 19/41 (46%), Positives = 29/41 (70%) Query: 107 VNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 ++ DWR DSRQ+ +N ++DTLK+ +P SG EG++EL Sbjct: 12 LDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNEL 52 >dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-group)] Length = 1359 Score = 95.1 bits (235), Expect = 1e-19 Identities = 50/89 (56%), Positives = 67/89 (75%) Query: 5 GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64 GDWR+Q S +R+RIVNKIM+T K LP PEG NEL+KIAVRFEEK++ A++Q++YL Sbjct: 35 GDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYL 94 Query: 65 RQICMKMLNMETKSQNAAGSSSADDNTPP 93 R+I +KML+METK+Q G++ N P Sbjct: 95 RKISLKMLSMETKTQQNPGNAQVIQNQNP 123 Score = 43.1 bits (100), Expect = 6e-04 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 11/72 (15%) Query: 76 TKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKI 135 T+ + A S D N P PA+ GDWR+Q ++R + +N ++DTLKK Sbjct: 12 TQGADPAASGGIDPNAPA-----------PALAGGDWRSQLQSEARNRIVNKIMDTLKKH 60 Query: 136 VPHSGKEGIDEL 147 +P S EG++EL Sbjct: 61 LPVSVPEGLNEL 72 >gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] Length = 1405 Score = 93.2 bits (230), Expect = 6e-19 Identities = 51/87 (58%), Positives = 66/87 (75%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ SR RIVNKIM+T + LPF +G NEL+KIA RFEEK++ AS+Q++Y Sbjct: 34 TGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDY 93 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDN 90 LR+I +KML+ME+KSQNA +S +N Sbjct: 94 LRKISLKMLSMESKSQNAMPNSLQSNN 120 Score = 53.1 bits (126), Expect = 8e-07 Identities = 25/50 (50%), Positives = 38/50 (76%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 P+ P E ++TGDWRTQ DSRQ+ +N ++DTLK+ +P SG++G++EL Sbjct: 23 PTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNEL 72 >dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)] Length = 414 Score = 37.0 bits (84), Expect = 0.053 Identities = 19/64 (29%), Positives = 34/64 (52%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DWRT+ R R+ I+ + +L +L+K+A R EE+++ A + +YLR Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71 Query: 66 QICM 69 +I + Sbjct: 72 RISL 75 >pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) emb|CAA21993.1| possible regulatory protein [Candida albicans] Length = 1145 Score = 33.5 bits (75), Expect = 0.53 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%) Query: 7 WRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYLR 65 WR + R ++V I+ T L +L P L K+A FE+ ++ ++++ +YLR Sbjct: 23 WRAMYSGEERQKVVQIIINT-LTELHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLR 81 Query: 66 QICMKMLNMETKSQNAAGSSSADDN 90 I MK+ + + Q A + N Sbjct: 82 AIKMKVHQLRVQKQQIAANQGGQIN 106 >ref|XP_163726.1| hypothetical protein XP_163726 [Mus musculus] Length = 94 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/48 (43%), Positives = 27/48 (55%), Gaps = 12/48 (25%) Query: 79 QNAAGSSSADDNTPPL------VPEPSVPNNEPAVNTGDWRTQQPQDS 120 Q+ AGSSSA D PP+ +PE +P+N PAV+ QQ Q S Sbjct: 27 QSLAGSSSAGDPGPPVRRWWYELPESLLPDNIPAVD------QQSQSS 68 >dbj|BAB15155.1| unnamed protein product [Homo sapiens] Length = 872 Score = 32.0 bits (71), Expect = 1.6 Identities = 20/52 (38%), Positives = 26/52 (49%), Gaps = 13/52 (25%) Query: 91 TPPLVPEPSV--------PNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKK 134 TPPL PSV PNNEP +NTG Q Q+S + +N ++ K Sbjct: 664 TPPLQQSPSVIRRLVTISPNNEPKLNTG-----QIQESIGEAVNGIVKHFHK 710 >gb|EAA19738.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 379 Score = 31.6 bits (70), Expect = 2.0 Identities = 13/27 (48%), Positives = 20/27 (73%) Query: 49 FEEKLFNNASNQTEYLRQICMKMLNME 75 F EKL++N SN T Y+ +I K+LN++ Sbjct: 340 FCEKLYDNISNSTFYILEIMKKILNLQ 366 >ref|XP_218613.1| similar to sialic acid-binding lectin Siglec-F [Mus musculus] [Rattus norvegicus] Length = 568 Score = 31.2 bits (69), Expect = 3.0 Identities = 14/54 (25%), Positives = 22/54 (39%) Query: 85 SSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPH 138 S PPL P +P +EP ++ Q P+ + KN + +I H Sbjct: 513 SQTQKEEPPLATAPDIPKDEPELHYASLSFQGPRPQQPKNTETIKSVYTEIKIH 566 >ref|NP_843064.1| lipoprotein, putative [Bacillus anthracis str. Ames] gb|AAP24550.1| lipoprotein, putative [Bacillus anthracis str. Ames] Length = 362 Score = 30.8 bits (68), Expect = 3.3 Identities = 17/75 (22%), Positives = 34/75 (44%), Gaps = 2/75 (2%) Query: 8 RTQFPSASRSRIVNKIMETQLKQLPFIRP--EGTNELRKIAVRFEEKLFNNASNQTEYLR 65 + QF + + +++ T + L ++ NELR + F+E + N + T Y Sbjct: 209 KVQFAKIRKLVLFRQMLATTSRALSTLKSLHRTENELRYMPEEFQESIQNELDSLTHYHE 268 Query: 66 QICMKMLNMETKSQN 80 Q+ +K + K Q+ Sbjct: 269 QVLLKFIGKAKKQQS 283 >gb|AAM54150.1|AC104616_9 hypothetical protein [Oryza sativa (japonica cultivar-group)] gb|AAN04973.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] gb|AAP52536.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] Length = 889 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/60 (28%), Positives = 30/60 (49%) Query: 77 KSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIV 136 ++ +A GS ++ P P V + + N GD+ + +D+ K I L D +KKI+ Sbjct: 658 QTPSAVGSHHVEEEVQPAAPAIPVLADLFSFNIGDYLDETEEDTTSKAIAPLSDDVKKIL 717 >ref|NP_654458.1| hypothetical protein predicted by GeneMark [Bacillus anthracis A2012] Length = 299 Score = 30.8 bits (68), Expect = 4.1 Identities = 17/75 (22%), Positives = 34/75 (44%), Gaps = 2/75 (2%) Query: 8 RTQFPSASRSRIVNKIMETQLKQLPFIRP--EGTNELRKIAVRFEEKLFNNASNQTEYLR 65 + QF + + +++ T + L ++ NELR + F+E + N + T Y Sbjct: 146 KVQFAKIRKLVLFRQMLATTSRALSTLKSLHRTENELRYMPEEFQESIQNELDSLTHYHE 205 Query: 66 QICMKMLNMETKSQN 80 Q+ +K + K Q+ Sbjct: 206 QVLLKFIGKAKKQQS 220 >ref|NP_613087.1| hoar [Mamestra configurata nucleopolyhedrovirus A] gb|AAM09112.1| hoar [Mamestra configurata nucleopolyhedrovirus] Length = 722 Score = 30.4 bits (67), Expect = 4.5 Identities = 22/74 (29%), Positives = 36/74 (47%), Gaps = 2/74 (2%) Query: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQ-D 119 +E L+ + K LN S+ + +S A++ + P P S P + A N + PQ D Sbjct: 404 SESLKVVTSK-LNSIFDSKPTSPASPANEESAPTSPAASTPTSPAASNIAPTQVDSPQAD 462 Query: 120 SRQKNINALLDTLK 133 S +I A D++K Sbjct: 463 STTADIAAAFDSVK 476 >emb|CAD98067.1| hypothetical protein [Homo sapiens] Length = 799 Score = 30.4 bits (67), Expect = 4.7 Identities = 12/47 (25%), Positives = 27/47 (56%) Query: 41 ELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSA 87 E R I+V+F + + ++L ++C + +N+E S++ G+ +A Sbjct: 216 EGRTISVQFNQLFLRPNKEKIDFLLEVCSRSVNLEKASESLKGNMAA 262 >ref|NP_603806.1| DNA repair protein radC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] sp|Q8RF15|RADC_FUSNN DNA repair protein radC homolog gb|AAL95105.1| DNA repair protein radC [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 232 Score = 30.4 bits (67), Expect = 4.9 Identities = 20/72 (27%), Positives = 35/72 (47%), Gaps = 4/72 (5%) Query: 21 NKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQN 80 NKI ++++ I +NE+ + FEE + Y R+I K++N+ KS Sbjct: 123 NKIGYEEIEKFYVIYLSSSNEV----IEFEENSVGTLDRSSVYPREIYKKVINLNAKSII 178 Query: 81 AAGSSSADDNTP 92 A + +D+ TP Sbjct: 179 LAHNHPSDNITP 190 >gb|EAA19170.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 706 Score = 30.4 bits (67), Expect = 5.2 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Query: 44 KIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAA 82 KI+ + FNN +N T+YLR +C +L+ +K QN + Sbjct: 199 KISNLYISSNFNNKNNDTDYLRGLC-NILDKYSKLQNVS 236 >ref|XP_132700.3| nuclear receptor subfamily 2, group C, member 2 [Mus musculus] Length = 353 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 12/93 (12%) Query: 60 QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD 119 Q +R+ +L ++K++ + G+ N S+ N ++N GD QP+D Sbjct: 6 QQPLIREDGTVLLAADSKAETSQGALGTLANVV-----TSLANLSESLNNGDASEMQPED 60 Query: 120 SRQKNINALLDTLKKIV-------PHSGKEGID 145 I DTL K + P S +GID Sbjct: 61 QSASEITRAFDTLAKALNTTDSASPPSLADGID 93 >ref|NP_833581.1| Serine/threonine protein kinase [Bacillus cereus ATCC 14579] gb|AAP10782.1| Serine/threonine protein kinase [Bacillus cereus ATCC 14579] Length = 657 Score = 30.0 bits (66), Expect = 5.7 Identities = 16/58 (27%), Positives = 29/58 (49%) Query: 8 RTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 R Q +A + I + ++ + PF PE + I + +E+LF N S++T L+ Sbjct: 256 RYQSANAMKRDIETALYPERINEQPFYIPEDMEATKAIPIIQQEQLFENVSDETIVLK 313 >ref|NP_266159.1| subunit B of ATP-dependent exonuclease [Lactococcus lactis subsp. lactis] pir||C86625 subunit B of ATP-dependent exonuclease [imported] - Lactococcus lactis subsp. lactis (strain IL1403) gb|AAK04101.1|AE006239_3 subunit B of ATP-dependent exonuclease [Lactococcus lactis subsp. lactis] Length = 1099 Score = 30.0 bits (66), Expect = 5.7 Identities = 13/23 (56%), Positives = 18/23 (77%) Query: 41 ELRKIAVRFEEKLFNNASNQTEY 63 EL+KI RFEEKL N+ +N +E+ Sbjct: 147 ELKKILSRFEEKLANDYANYSEF 169 >ref|XP_319745.1| ENSANGP00000006359 [Anopheles gambiae] gb|EAA14871.1| ENSANGP00000006359 [Anopheles gambiae str. PEST] Length = 645 Score = 30.0 bits (66), Expect = 6.3 Identities = 19/56 (33%), Positives = 27/56 (47%), Gaps = 1/56 (1%) Query: 72 LNMETKSQNAAGSSSADDNTPPLV-PEPSVPNNEPAVNTGDWRTQQPQDSRQKNIN 126 +N S+N AGSSS N P P PS+ + V+T T +P +R+ N Sbjct: 33 VNYVQSSKNPAGSSSPTSNKRPSARPSPSLATQDNRVSTTRTTTYKPYKTRRPTTN 88 >ref|NP_059019.1| TR4 orphan receptor; orphan receptor, TR4 [Rattus norvegicus] sp|P55094|TR4_RAT ORPHAN NUCLEAR RECEPTOR TR4 pir||I80177 TR4 orphan receptor - rat gb|AAA21475.1| TR4 orphan receptor Length = 596 Score = 30.0 bits (66), Expect = 7.0 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 12/93 (12%) Query: 60 QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD 119 Q +R+ +L ++K++ + G+ N S+ N ++N GD QP+D Sbjct: 249 QQPLIREDGTVLLATDSKAETSQGALGTLANVV-----TSLANLSESLNNGDASEMQPED 303 Query: 120 SRQKNINALLDTLKKIV-------PHSGKEGID 145 I DTL K + P S +GID Sbjct: 304 QSASEITRAFDTLAKALNTTDSASPPSLADGID 336 >ref|NP_524762.1| rugose CG6775-PA [Drosophila melanogaster] sp|Q9W4E2|NBEA_DROME Neurobeachin protein (Rugose protein) (A-kinase anchor protein 550) (AKAP 550) (dAKAP550) gb|AAF46011.2| CG6775-PA [Drosophila melanogaster] Length = 3584 Score = 30.0 bits (66), Expect = 7.2 Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 16/131 (12%) Query: 13 SASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKML 72 +A+ IV +++E L ++ E T E + EE+ N + E L Q+ K Sbjct: 1438 AAAAKEIVQEVVEAALV---MVQEESTQEKPEKGANSEEE--KNEIGKEEILLQLEEKPA 1492 Query: 73 NMET----------KSQNAAGSSSADDNTPPL-VPEPSVPNNEPAVNTGDWRTQQPQDSR 121 + E K ++ G SS + TP L P+P + + + Q+P++ Sbjct: 1493 STEVQETKIEGDLKKPEDPKGHSSVEPKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQV 1552 Query: 122 QKNINALLDTL 132 +N +LDTL Sbjct: 1553 VAIVNQVLDTL 1563 >sp|P49117|TR4_MOUSE Orphan nuclear receptor TR4 (Orphan nuclear receptor TAK1) pir||JC4299 orphan nuclear receptor TAK1 homolog - mouse gb|AAA93150.1| orphan receptor TAK1 Length = 596 Score = 29.6 bits (65), Expect = 7.5 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 12/93 (12%) Query: 60 QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD 119 Q +R+ +L ++K++ + G+ N S+ N ++N GD QP+D Sbjct: 249 QQPLIREDGTVLLAADSKAETSQGALGTLANVV-----TSLANLSESLNNGDASEMQPED 303 Query: 120 SRQKNINALLDTLKKIV-------PHSGKEGID 145 I DTL K + P S +GID Sbjct: 304 QSASEITRAFDTLAKALNTTDSASPPSLADGID 336 >ref|ZP_00124232.1| hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 1729 Score = 29.6 bits (65), Expect = 7.7 Identities = 26/114 (22%), Positives = 48/114 (41%), Gaps = 8/114 (7%) Query: 20 VNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQ 79 V +++ QL + P L + A R + +NA + ML M+ + Sbjct: 950 VFSVLQAQLNRYHVQTPTRLRLLTRAAPRSSDARMDNAGDGA--------LMLFMQAQDS 1001 Query: 80 NAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLK 133 A G + DN +P+ +++PA T +Q+ Q ++ +LD+LK Sbjct: 1002 EAEGLFPSADNFVYPIPDDRGADSQPAYGTVLMLSQETQSMVERERLQVLDSLK 1055 >ref|NP_726978.1| rugose CG6775-PB [Drosophila melanogaster] gb|AAN09135.1| CG6775-PB [Drosophila melanogaster] Length = 3522 Score = 29.6 bits (65), Expect = 7.8 Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 16/131 (12%) Query: 13 SASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKML 72 +A+ IV +++E L ++ E T E + EE+ N + E L Q+ K Sbjct: 1376 AAAAKEIVQEVVEAALV---MVQEESTQEKPEKGANSEEE--KNEIGKEEILLQLEEKPA 1430 Query: 73 NMET----------KSQNAAGSSSADDNTPPL-VPEPSVPNNEPAVNTGDWRTQQPQDSR 121 + E K ++ G SS + TP L P+P + + + Q+P++ Sbjct: 1431 STEVQETKIEGDLKKPEDPKGHSSVEPKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQV 1490 Query: 122 QKNINALLDTL 132 +N +LDTL Sbjct: 1491 VAIVNQVLDTL 1501 >pir||I54075 gene mTR2R1 protein - mouse gb|AAB33314.1| type II zinc finger DNA binding transcription factor [Mus sp.] Length = 629 Score = 29.6 bits (65), Expect = 8.4 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 12/93 (12%) Query: 60 QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD 119 Q +R+ +L ++K++ + G+ N S+ N ++N GD QP+D Sbjct: 282 QQPLIREDGTVLLAADSKAETSQGALGTLANVV-----TSLANLSESLNNGDASEMQPED 336 Query: 120 SRQKNINALLDTLKKIV-------PHSGKEGID 145 I DTL K + P S +GID Sbjct: 337 QSASEITRAFDTLAKALNTTDSASPPSLADGID 369 >sp|Q57408|HGP4_HAEIN Probable hemoglobin and hemoglobin-haptoglobin binding protein 4 precursor Length = 999 Score = 29.6 bits (65), Expect = 8.6 Identities = 22/67 (32%), Positives = 27/67 (39%), Gaps = 19/67 (28%) Query: 55 NNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRT 114 N SN +E L QI N GS + +DNTPP + E + Sbjct: 48 NQNSNASEQLEQI------------NVLGSDNNNDNTPPKIA-------ETVKTASQLKR 88 Query: 115 QQPQDSR 121 QQ QDSR Sbjct: 89 QQVQDSR 95 >ref|NP_044842.1| unknown [murid herpesvirus 4] emb|CAA72393.1| ORF2 [Murid herpesvirus 4] gb|AAB66427.1| unknown [murid herpesvirus 4] gb|AAF19270.1|AF105037_2 M2 [murid herpesvirus 4] Length = 199 Score = 29.6 bits (65), Expect = 9.2 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 14/103 (13%) Query: 8 RTQFPSASRSRIVNKIMET-----QLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62 RT+FP R R NK+ T + + P PE N A EE ++ A+++ Sbjct: 81 RTRFPKTIR-RGFNKLRSTLKSPWKPRPSPVPSPEEVNP----AGSPEENIYETANSEPV 135 Query: 63 YLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEP 105 Y++ I + L M ++ + S ++ PP P P +PN P Sbjct: 136 YIQPISTRSLMM----LDSGSTDSPENLGPPTRPLPKLPNQHP 174 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: ref|NP_173031.2| expressed protein [Arabidopsis thaliana] >gi|25... 245 8e-65 ref|NP_173030.1| expressed protein [Arabidopsis thaliana] 181 2e-45 pir||B86292 F7H2.12 protein - Arabidopsis thaliana >gi|8927657|g... 166 6e-41 gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 156 7e-38 gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 152 7e-37 dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-gro... 151 2e-36 Sequences not found previously or not previously below threshold: dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-g... 56 1e-07 pir||T18235 transcription activator GAL11 homolog - yeast (Candi... 43 8e-04 ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] >gi... 39 0.011 ref|NP_559546.1| conserved hypothetical protein [Pyrobaculum aer... 37 0.051 ref|ZP_00043576.1| hypothetical protein [Magnetococcus sp. MC-1] 34 0.44 ref|NP_851322.1| OATPX protein [Homo sapiens] >gi|30575718|gb|AA... 33 0.70 ref|NP_217566.1| hypothetical protein Rv3050c [Mycobacterium tub... 33 0.79 gb|EAA35394.1| hypothetical protein [Neurospora crassa] 33 1.1 ref|NP_248731.1| probable hemagglutinin [Pseudomonas aeruginosa ... 33 1.1 ref|NP_600870.2| preprotein translocase subunit SecD [Corynebact... 32 1.7 gb|AAK19842.1|AF331924_7 SecD [Corynebacterium glutamicum] 32 1.7 gb|AAH45472.1| Similar to PC2 (positive cofactor 2, multiprotein... 31 3.0 ref|XP_215692.1| similar to myozenin-like 2; calsarcin-1 [Mus mu... 31 3.6 ref|NP_050006.1| multifunctional protein [Sugarcane yellow leaf ... 31 4.3 ref|ZP_00065188.1| hypothetical protein [Microbulbifer degradans... 31 4.3 gb|AAP21786.1| multifunctional protein [Sugarcane yellow leaf vi... 31 4.3 ref|NP_497144.1| TAZ zinc finger family member [Caenorhabditis e... 30 4.8 gb|EAA33978.1| predicted protein [Neurospora crassa] 30 5.8 ref|NP_067478.1| myozenin 2; myozenin-like 2; calsarcin-1 [Mus m... 30 6.8 pir||A89221 protein T27F2.2 [imported] - Caenorhabditis elegans 30 7.0 ref|NP_505948.1| Rap ran-GAP [Caenorhabditis elegans] >gi|750859... 30 7.0 gb|AAO52284.1| similar to Dictyostelium discoideum (Slime mold).... 30 7.4 ref|NP_803265.1| phi ETA orf 17-like protein [Staphylococcus aur... 30 7.8 ref|NP_510911.1| hypothetical protein [Bacteriophage phi ETA] >g... 30 8.0 ref|NP_803367.1| phi ETA orf 17-like protein [Staphylococcus aur... 30 8.0 gb|AAG13932.1| muscle-specific protein [Homo sapiens] 30 8.6 gb|AAP36689.1| Homo sapiens myozenin 2 [synthetic construct] 30 8.7 ref|NP_057683.1| calcineurin-binding protein calsarcin-1; muscle... 30 9.1 >ref|NP_173031.2| expressed protein [Arabidopsis thaliana] pir||C86292 F7H2.13 protein - Arabidopsis thaliana gb|AAF82149.1|AC034256_13 ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene. [Arabidopsis thaliana] gb|AAG48787.1|AF332424_1 unknown protein [Arabidopsis thaliana] Length = 179 Score = 245 bits (626), Expect = 8e-65 Identities = 148/148 (100%), Positives = 148/148 (100%) Query: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ Sbjct: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 Query: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS Sbjct: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 Query: 121 RQKNINALLDTLKKIVPHSGKEGIDELM 148 RQKNINALLDTLKKIVPHSGKEGIDELM Sbjct: 121 RQKNINALLDTLKKIVPHSGKEGIDELM 148 Score = 88.9 bits (219), Expect = 1e-17 Identities = 34/71 (47%), Positives = 47/71 (65%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ P SR + +N +++T K +P EG +EL +IAV EE +FN+A NQ +Y Sbjct: 109 TGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQEDY 168 Query: 64 LRQICMKMLNM 74 L +I +KM M Sbjct: 169 LGKISLKMRTM 179 >ref|NP_173030.1| expressed protein [Arabidopsis thaliana] Length = 1335 Score = 181 bits (459), Expect = 2e-45 Identities = 69/115 (60%), Positives = 79/115 (68%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQT+Y Sbjct: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQ 118 LR+I MKML METKSQNAAGSS+A S+P N+ + G T Q Q Sbjct: 79 LRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPTNQGQLLPGSLSTNQSQ 133 Score = 88.1 bits (217), Expect = 2e-17 Identities = 33/50 (66%), Positives = 42/50 (84%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL Sbjct: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINEL 57 >pir||B86292 F7H2.12 protein - Arabidopsis thaliana gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene. [Arabidopsis thaliana] Length = 1366 Score = 166 bits (420), Expect = 6e-41 Identities = 69/146 (47%), Positives = 79/146 (53%), Gaps = 31/146 (21%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ--- 60 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQ Sbjct: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQRFV 78 Query: 61 ----------------------------TEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92 T+YLR+I MKML METKSQNAAGSS+A Sbjct: 79 RQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTMETKSQNAAGSSAAIPAAN 138 Query: 93 PLVPEPSVPNNEPAVNTGDWRTQQPQ 118 S+P N+ + G T Q Q Sbjct: 139 NGTSIDSIPTNQGQLLPGSLSTNQSQ 164 Score = 88.9 bits (219), Expect = 1e-17 Identities = 33/50 (66%), Positives = 42/50 (84%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL Sbjct: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINEL 57 >gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] Length = 3148 Score = 156 bits (394), Expect = 7e-38 Identities = 50/88 (56%), Positives = 66/88 (74%), Gaps = 5/88 (5%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DWR SR RIVNKIM+T + LPF PEG NEL++IA RFEEK+F +A++Q++YLR Sbjct: 16 DWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQSDYLR 75 Query: 66 QICMKMLNMETKSQNAAGSSSADDNTPP 93 +I +KML+ME++SQNA+GS N PP Sbjct: 76 KISLKMLSMESRSQNASGS-----NEPP 98 Score = 82.7 bits (203), Expect = 9e-16 Identities = 19/41 (46%), Positives = 29/41 (70%) Query: 107 VNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 ++ DWR DSRQ+ +N ++DTLK+ +P SG EG++EL Sbjct: 12 LDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNEL 52 >gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] Length = 1405 Score = 152 bits (385), Expect = 7e-37 Identities = 56/135 (41%), Positives = 77/135 (56%), Gaps = 6/135 (4%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ SR RIVNKIM+T + LPF +G NEL+KIA RFEEK++ AS+Q++Y Sbjct: 34 TGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDY 93 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN------NEPAVNTGDWRTQQP 117 LR+I +KML+ME+KSQNA +S +N P + N+ Q Sbjct: 94 LRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPGSMQNQVHNQGQSLPIPLSANQS 153 Query: 118 QDSRQKNINALLDTL 132 Q +Q + + + Sbjct: 154 QVRQQLLSQNIQNNM 168 Score = 86.6 bits (213), Expect = 7e-17 Identities = 25/50 (50%), Positives = 38/50 (76%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 P+ P E ++TGDWRTQ DSRQ+ +N ++DTLK+ +P SG++G++EL Sbjct: 23 PTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNEL 72 >dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-group)] Length = 1359 Score = 151 bits (381), Expect = 2e-36 Identities = 51/93 (54%), Positives = 68/93 (72%) Query: 5 GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64 GDWR+Q S +R+RIVNKIM+T K LP PEG NEL+KIAVRFEEK++ A++Q++YL Sbjct: 35 GDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYL 94 Query: 65 RQICMKMLNMETKSQNAAGSSSADDNTPPLVPE 97 R+I +KML+METK+Q G++ N P E Sbjct: 95 RKISLKMLSMETKTQQNPGNAQVIQNQNPPGSE 127 Score = 75.4 bits (184), Expect = 1e-13 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 83 GSSSADDNTPPLVPEPSVPNN-EPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGK 141 G+ P PN PA+ GDWR+Q ++R + +N ++DTLKK +P S Sbjct: 7 GNWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVP 66 Query: 142 EGIDEL 147 EG++EL Sbjct: 67 EGLNEL 72 >dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)] Length = 414 Score = 55.8 bits (133), Expect = 1e-07 Identities = 19/64 (29%), Positives = 34/64 (52%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DWRT+ R R+ I+ + +L +L+K+A R EE+++ A + +YLR Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71 Query: 66 QICM 69 +I + Sbjct: 72 RISL 75 >pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) emb|CAA21993.1| possible regulatory protein [Candida albicans] Length = 1145 Score = 43.0 bits (100), Expect = 8e-04 Identities = 21/79 (26%), Positives = 39/79 (48%), Gaps = 2/79 (2%) Query: 7 WRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYLR 65 WR + R ++V I+ T +L P L K+A FE+ ++ ++++ +YLR Sbjct: 23 WRAMYSGEERQKVVQIIINTLT-ELHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLR 81 Query: 66 QICMKMLNMETKSQNAAGS 84 I MK+ + + Q A + Sbjct: 82 AIKMKVHQLRVQKQQIAAN 100 >ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] pir||E84491 hypothetical protein At2g10440 [imported] - Arabidopsis thaliana gb|AAD28655.1| hypothetical protein [Arabidopsis thaliana] Length = 935 Score = 39.2 bits (90), Expect = 0.011 Identities = 16/56 (28%), Positives = 31/56 (54%), Gaps = 3/56 (5%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61 DWR+Q R ++++KI+E ++ N+ IA +FEE ++ A+++T Sbjct: 24 DWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---IASKFEENFYSIATDKT 76 >ref|NP_559546.1| conserved hypothetical protein [Pyrobaculum aerophilum] gb|AAL63728.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2] Length = 227 Score = 36.9 bits (84), Expect = 0.051 Identities = 32/135 (23%), Positives = 53/135 (38%), Gaps = 19/135 (14%) Query: 6 DWRTQFPSASRS---RIVNKIMETQLKQLP-FIRPEG----TNELRKIAVRFEEKLFNNA 57 DW+ F SA+ R V ++E + LP F +G ELR++ R E +A Sbjct: 61 DWQQLFTSAAAELGVREVPDVVEVLHRHLPSFRLNDGAIEALAELREMGFRVEIATNGHA 120 Query: 58 SNQTEYLRQICMKMLNMETKSQNAAG----------SSSADDNTPPLVPEPSVPN-NEPA 106 S Q +RQ+ + L ++ +A ++ P+ A Sbjct: 121 SYQLPVIRQLGLDRLVDGVRTSDAYKCAKTCPEFFHNAQVMIGDNPVFDVYFPKRYGLRA 180 Query: 107 VNTGDWRTQQPQDSR 121 + GDW + P+ SR Sbjct: 181 IFFGDWSKEAPEYSR 195 >ref|ZP_00043576.1| hypothetical protein [Magnetococcus sp. MC-1] Length = 682 Score = 33.8 bits (76), Expect = 0.44 Identities = 16/65 (24%), Positives = 25/65 (37%), Gaps = 5/65 (7%) Query: 67 ICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNIN 126 I + L ++ NA + N E N+P+ N D R Q R + Sbjct: 275 IAYRALLKSVRNTNAKAGTVVVMNPNNG--EILALVNQPSYNPNDLRHSQDHQRRNR--- 329 Query: 127 ALLDT 131 A++DT Sbjct: 330 AIMDT 334 >ref|NP_851322.1| OATPX protein [Homo sapiens] gb|AAP33047.1| OATPX [Homo sapiens] Length = 722 Score = 33.0 bits (74), Expect = 0.70 Identities = 13/49 (26%), Positives = 23/49 (46%) Query: 66 QICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRT 114 QI + L+ + + +N+ P PEPS+P+ P V+ R+ Sbjct: 29 QIEVSALSSDPQRENSQPQELQKPQEPQKSPEPSLPSAPPNVSEEKLRS 77 >ref|NP_217566.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] ref|NP_337653.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] ref|NP_856721.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] pir||E70861 hypothetical protein Rv3050c - Mycobacterium tuberculosis (strain H37RV) emb|CAA16135.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] gb|AAK47467.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] emb|CAD96763.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] Length = 246 Score = 33.0 bits (74), Expect = 0.79 Identities = 13/70 (18%), Positives = 38/70 (53%), Gaps = 1/70 (1%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYL 64 D R++ R ++ N+I++ + + + PE ++ + A + K++ + +++++ L Sbjct: 18 DARSERWREHRKKVRNEIVDAAFRAIDRLGPELSVRQIAEEAGTAKPKIYRHFTDKSDLL 77 Query: 65 RQICMKMLNM 74 I M++ +M Sbjct: 78 EAIGMRLRDM 87 >gb|EAA35394.1| hypothetical protein [Neurospora crassa] Length = 1562 Score = 32.6 bits (73), Expect = 1.1 Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 3/72 (4%) Query: 72 LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVN--TGDWRTQQPQDSRQKNINALL 129 ++ME+++ A S + + + P PS ++P G+ ++Q D++ + Sbjct: 271 MSMESRTSRARRSLNVVRDEVEMTPVPSPLPHQPNEMDFPGEGSSRQV-DNKYALQDIKG 329 Query: 130 DTLKKIVPHSGK 141 D + + +P SGK Sbjct: 330 DLVNRNLPISGK 341 >ref|NP_248731.1| probable hemagglutinin [Pseudomonas aeruginosa PA01] pir||E83641 probable hemagglutinin PA0041 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG03431.1|AE004443_9 probable hemagglutinin [Pseudomonas aeruginosa PAO1] Length = 3535 Score = 32.6 bits (73), Expect = 1.1 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 7/44 (15%) Query: 9 TQFPSASRSRIVNKIMETQLKQLP-FIRPEGTNELRKIAVRFEE 51 +Q P R VN + LP F P+G N L +++ RF E Sbjct: 2218 SQLPPDLARRQVNPVT------LPGFSLPQGDNGLFRLSSRFAE 2255 >ref|NP_600870.2| preprotein translocase subunit SecD [Corynebacterium glutamicum ATCC 13032] dbj|BAB99051.1| Preprotein translocase subunit SecD [Corynebacterium glutamicum ATCC 13032] Length = 644 Score = 31.9 bits (71), Expect = 1.7 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 32 PFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNT 91 PF N + ++ EE+ N ++ EYL++I K + S + +SS D++ Sbjct: 576 PFFAKSSVNGMGRVMKLVEERRANGELDEPEYLKKIHAKNAAADKASTD---NSSTDNSE 632 Query: 92 PPLV 95 P Sbjct: 633 APGT 636 >gb|AAK19842.1|AF331924_7 SecD [Corynebacterium glutamicum] Length = 637 Score = 31.9 bits (71), Expect = 1.7 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Query: 32 PFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNT 91 PF N + ++ EE+ N ++ EYL++I K + S + +SS D++ Sbjct: 569 PFFAKSSVNGMGRVMKLVEERRANGELDEPEYLKKIHAKNAAADKASTD---NSSTDNSE 625 Query: 92 PPLV 95 P Sbjct: 626 APGT 629 >gb|AAH45472.1| Similar to PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein [Danio rerio] Length = 809 Score = 31.1 bits (69), Expect = 3.0 Identities = 29/112 (25%), Positives = 43/112 (37%), Gaps = 17/112 (15%) Query: 1 MDTTG---DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNA 57 MD G DWR+ A R ++V +I E K GT + + E +F A Sbjct: 1 MDVPGPDSDWRS---PAFRQKVVAQIEEAMRK-------AGTGHTKS-STEMESHVFTKA 49 Query: 58 SNQTEYLRQIC---MKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPA 106 + EYL + + ++ K+Q +A N P VP P A Sbjct: 50 KTREEYLSMVARLIIHFRDIHKKAQGGPDPINALQNLPGGVPGVIGPRPPGA 101 >ref|XP_215692.1| similar to myozenin-like 2; calsarcin-1 [Mus musculus] [Rattus norvegicus] Length = 264 Score = 30.7 bits (68), Expect = 3.6 Identities = 13/42 (30%), Positives = 17/42 (39%) Query: 69 MKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 + M N N G S +TPP P+P P N + G Sbjct: 85 LAMQNGRIDGSNLEGGSQQAPSTPPNTPDPRSPPNPENIAPG 126 >ref|NP_050006.1| multifunctional protein [Sugarcane yellow leaf virus] gb|AAD45683.1|AF157029_2 multifunctional protein [sugarcane yellow leaf virus] Length = 650 Score = 30.7 bits (68), Expect = 4.3 Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 18/120 (15%) Query: 12 PSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASN--------QTEY 63 S ++N I+ ++++ +L IA R EEKL A N ++ Sbjct: 524 QDESTKELLNNIVSQLIQKI---------DLSSIATRVEEKLLRQAQNKQQQNGGKKSPR 574 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 R+ T ++ +S N P ++P N A N +Q Q R K Sbjct: 575 KRKTSNTSSKPHTNGKSPPVTSQGSGNAAN-SPRYTIPQNRRAHNGESASSQSTQKWRPK 633 >ref|ZP_00065188.1| hypothetical protein [Microbulbifer degradans 2-40] Length = 306 Score = 30.7 bits (68), Expect = 4.3 Identities = 11/63 (17%), Positives = 21/63 (32%) Query: 59 NQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQ 118 +Q+ L + K + +E ++ PL + P E ++ R Sbjct: 112 SQSALLEAMEEKQVTIEGSTRQLPKPFFVIATQNPLSQAGTYPLPESQLDRFLLRISLGY 171 Query: 119 DSR 121 SR Sbjct: 172 PSR 174 >gb|AAP21786.1| multifunctional protein [Sugarcane yellow leaf virus] Length = 650 Score = 30.7 bits (68), Expect = 4.3 Identities = 26/120 (21%), Positives = 43/120 (35%), Gaps = 18/120 (15%) Query: 12 PSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASN--------QTEY 63 S ++N I+ ++++ +L IA R EEKL A N ++ Sbjct: 524 QDESTKELLNNIVSQLIQKI---------DLSSIATRVEEKLLRQAQNKQQQNGGKKSPR 574 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 R+ T ++ +S N P ++P N A N +Q Q R K Sbjct: 575 KRKTSNTSSKPHTNGKSPPVTSQGSGNAAN-SPRYTIPQNRRAHNGESASSQSTQKWRPK 633 >ref|NP_497144.1| TAZ zinc finger family member [Caenorhabditis elegans] pir||T33579 hypothetical protein C29F9.6 - Caenorhabditis elegans gb|AAC68748.1| Hypothetical protein C29F9.6 [Caenorhabditis elegans] Length = 228 Score = 30.3 bits (67), Expect = 4.8 Identities = 18/96 (18%), Positives = 41/96 (41%), Gaps = 2/96 (2%) Query: 3 TTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62 T+ W ++ P R ++ +I + + P R E ++++ A E ++F A ++ E Sbjct: 116 TSQPWHSEVPKTDREAVIERISKHIMLH-P-QRFEPIWKIKEDARAAELQIFEAAGSRDE 173 Query: 63 YLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEP 98 Y R + + + K+ G + + +P Sbjct: 174 YYRMVEERAPREQDKAPEGPGQEAQKEEKGAGEEDP 209 >gb|EAA33978.1| predicted protein [Neurospora crassa] Length = 461 Score = 30.3 bits (67), Expect = 5.8 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 6/66 (9%) Query: 71 MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLD 130 M ++E S NA+ + P S W T ++S QK ++ +LD Sbjct: 1 MPSLENSSSNASPGGTRIGRPPQWTLSRSRKLARL------WLTGLSKNSAQKTVHKMLD 54 Query: 131 TLKKIV 136 + + Sbjct: 55 HDPRHL 60 >ref|NP_067478.1| myozenin 2; myozenin-like 2; calsarcin-1 [Mus musculus] emb|CAB92972.1| FATZ related protein 2 [Mus musculus] gb|AAG38939.1| calcineurin-binding protein calsarcin-1 [Mus musculus] gb|AAH24360.1| myozenin 2 [Mus musculus] Length = 264 Score = 29.9 bits (66), Expect = 6.8 Identities = 13/40 (32%), Positives = 16/40 (39%) Query: 71 MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 M N N G S +TPP P+P P N + G Sbjct: 87 MQNGRVDGSNLEGGSQQGPSTPPNTPDPRSPPNPENIAPG 126 >pir||A89221 protein T27F2.2 [imported] - Caenorhabditis elegans Length = 918 Score = 29.9 bits (66), Expect = 7.0 Identities = 20/102 (19%), Positives = 41/102 (39%), Gaps = 20/102 (19%) Query: 46 AVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE- 104 A F+E+ F+ + + +E ++ N +N P + SV +N Sbjct: 778 ASSFDERTFSFTATKK-----------TIEQRANN------ISNNRPNTLSSASVHDNMC 820 Query: 105 PAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDE 146 +N + + D + + + L+D L + P S +E +E Sbjct: 821 TLLNPPKYLNRAQSDEQLR--SPLMDELNRKAPLSARESTNE 860 >ref|NP_505948.1| Rap ran-GAP [Caenorhabditis elegans] pir||T21738 hypothetical protein T27F2.2 - Caenorhabditis elegans emb|CAA98469.2| Hypothetical protein T27F2.2 [Caenorhabditis elegans] emb|CAA98554.2| Hypothetical protein T27F2.2 [Caenorhabditis elegans] Length = 924 Score = 29.9 bits (66), Expect = 7.0 Identities = 20/102 (19%), Positives = 41/102 (39%), Gaps = 20/102 (19%) Query: 46 AVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE- 104 A F+E+ F+ + + +E ++ N +N P + SV +N Sbjct: 784 ASSFDERTFSFTATKK-----------TIEQRANN------ISNNRPNTLSSASVHDNMC 826 Query: 105 PAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDE 146 +N + + D + + + L+D L + P S +E +E Sbjct: 827 TLLNPPKYLNRAQSDEQLR--SPLMDELNRKAPLSARESTNE 866 >gb|AAO52284.1| similar to Dictyostelium discoideum (Slime mold). Histidine kinase DhkG Length = 786 Score = 29.9 bits (66), Expect = 7.4 Identities = 15/50 (30%), Positives = 20/50 (40%) Query: 66 QICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQ 115 Q M M ++ T S T PL P+ P N A+ TGD + Sbjct: 443 QTSMDMASLPTTIGKLRSQSDISSQTKPLPSLPTSPQNRSAIITGDSSSP 492 >ref|NP_803265.1| phi ETA orf 17-like protein [Staphylococcus aureus phage phi 11] gb|AAL82240.1| phi ETA orf 17-like protein [Staphylococcus aureus phage phi 11] Length = 259 Score = 29.6 bits (65), Expect = 7.8 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 14/85 (16%) Query: 18 RIVNKIMETQLKQLPFIRPEGTNELR---------KIAVRFEEKLFNNASNQTEYLRQIC 68 R ++K+ E L EG N+ + I + ++++ +Q++ L + Sbjct: 143 RYISKLQEHYQFHLAISGHEGINKDKDDEGSTINPTITIEAQDQIKKAVISQSDVLAR-- 200 Query: 69 MKMLNMETKSQNAAGSSSADDNTPP 93 + +E Q+ + N P Sbjct: 201 ---MTIEEHEQDGEKTYQYVLNAEP 222 >ref|NP_510911.1| hypothetical protein [Bacteriophage phi ETA] dbj|BAA97603.1| ORF17~unknown [bacteriophage phi ETA] Length = 259 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 14/85 (16%) Query: 18 RIVNKIMETQLKQLPFIRPEGTNELR---------KIAVRFEEKLFNNASNQTEYLRQIC 68 R ++K+ E L EG N+ + I + ++++ +Q++ L + Sbjct: 143 RYISKLQEHYQFHLAISGHEGINKDKDDEGSTINPTITIEAQDQIKKAVISQSDVLAR-- 200 Query: 69 MKMLNMETKSQNAAGSSSADDNTPP 93 + +E Q+ + N P Sbjct: 201 ---MTIEEHEQDGEKTYQYVLNAEP 222 >ref|NP_803367.1| phi ETA orf 17-like protein [Staphylococcus aureus phage phi 13] gb|AAL82342.1| phi ETA orf 17-like protein [Staphylococcus aureus phage phi 13] Length = 259 Score = 29.6 bits (65), Expect = 8.0 Identities = 14/85 (16%), Positives = 32/85 (37%), Gaps = 14/85 (16%) Query: 18 RIVNKIMETQLKQLPFIRPEGTNELR---------KIAVRFEEKLFNNASNQTEYLRQIC 68 R ++K+ E L EG N+ + I + ++++ +Q++ L + Sbjct: 143 RYISKLQEHYQFHLAISGHEGINKDKDDEGSTINPTITIEAQDQIKKAVISQSDVLAR-- 200 Query: 69 MKMLNMETKSQNAAGSSSADDNTPP 93 + +E Q+ + N P Sbjct: 201 ---MTIEEHEQDGEKAYQYVLNAEP 222 >gb|AAG13932.1| muscle-specific protein [Homo sapiens] Length = 264 Score = 29.6 bits (65), Expect = 8.6 Identities = 20/88 (22%), Positives = 31/88 (34%), Gaps = 3/88 (3%) Query: 23 IMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAA 82 IM +L L ++ + ++ F N Q+ + M N + N Sbjct: 42 IMLEELSHLSNRGARLFKMRQRRSDKY---TFENFQYQSRAQINHSIAMQNGKVDGSNLE 98 Query: 83 GSSSADDNTPPLVPEPSVPNNEPAVNTG 110 G S TPP P+P P N + G Sbjct: 99 GGSQQAPLTPPNTPDPRSPPNPDNIAPG 126 >gb|AAP36689.1| Homo sapiens myozenin 2 [synthetic construct] Length = 265 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/88 (22%), Positives = 31/88 (34%), Gaps = 3/88 (3%) Query: 23 IMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAA 82 IM +L L ++ + ++ F N Q+ + M N + N Sbjct: 42 IMLEELSHLSNRGARLFKMRQRRSDKY---TFENFQYQSRAQINHSIAMQNGKVDGSNLE 98 Query: 83 GSSSADDNTPPLVPEPSVPNNEPAVNTG 110 G S TPP P+P P N + G Sbjct: 99 GGSQQAPLTPPNTPDPRSPPNPDNIAPG 126 >ref|NP_057683.1| calcineurin-binding protein calsarcin-1; muscle-specific protein; FATZ related protein 2; chromosome 4 open reading frame 5; calsarcin-1 [Homo sapiens] gb|AAF63623.1|AF249873_1 muscle-specific protein [Homo sapiens] emb|CAB92965.1| FATZ related protein 2 [Homo sapiens] gb|AAG38938.1| calcineurin-binding protein calsarcin-1 [Homo sapiens] gb|AAH05195.1|AAH05195 calcineurin-binding protein calsarcin-1 [Homo sapiens] gb|AAH17402.1|AAH17402 chromosome 4 open reading frame 5 [Homo sapiens] gb|AAH20932.1|AAH20932 myozenin 2 [Homo sapiens] gb|AAP35878.1| myozenin 2 [Homo sapiens] Length = 264 Score = 29.6 bits (65), Expect = 9.1 Identities = 20/88 (22%), Positives = 31/88 (34%), Gaps = 3/88 (3%) Query: 23 IMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAA 82 IM +L L ++ + ++ F N Q+ + M N + N Sbjct: 42 IMLEELSHLSNRGARLFKMRQRRSDKY---TFENFQYQSRAQINHSIAMQNGKVDGSNLE 98 Query: 83 GSSSADDNTPPLVPEPSVPNNEPAVNTG 110 G S TPP P+P P N + G Sbjct: 99 GGSQQAPLTPPNTPDPRSPPNPDNIAPG 126 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: ref|NP_173031.2| expressed protein [Arabidopsis thaliana] >gi|25... 227 2e-59 gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 176 4e-44 ref|NP_173030.1| expressed protein [Arabidopsis thaliana] 175 8e-44 pir||B86292 F7H2.12 protein - Arabidopsis thaliana >gi|8927657|g... 161 2e-39 gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 143 4e-34 dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-gro... 142 9e-34 dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-g... 102 1e-21 pir||T18235 transcription activator GAL11 homolog - yeast (Candi... 98 2e-20 Sequences not found previously or not previously below threshold: dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonica cultivar-g... 51 2e-06 ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] >gi... 43 7e-04 ref|NP_643335.1| transcriptional regulator [Xanthomonas axonopod... 40 0.009 ref|NP_586100.1| MADS domain [Encephalitozoon cuniculi] >gi|1906... 38 0.025 ref|ZP_00043576.1| hypothetical protein [Magnetococcus sp. MC-1] 35 0.23 dbj|BAC45105.1| OJ1705_C03.27 [Oryza sativa (japonica cultivar-g... 34 0.33 ref|NP_217566.1| hypothetical protein Rv3050c [Mycobacterium tub... 33 0.58 ref|NP_014019.1| Hypothetical ORF; Ymr291wp [Saccharomyces cerev... 33 0.79 ref|NP_774610.1| oxidoreductase [Bradyrhizobium japonicum] >gi|2... 33 0.81 ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thal... 33 0.86 ref|NP_657433.1| Glycos_transf_2, Glycosyl transferase [Bacillus... 33 0.95 ref|NP_341855.1| Conserved hypothetical protein [Sulfolobus solf... 32 1.3 ref|NP_250870.1| hypothetical protein [Pseudomonas aeruginosa PA... 32 1.5 ref|NP_173115.1| expressed protein [Arabidopsis thaliana] 32 1.6 ref|NP_603126.1| Autolysin response regulator [Fusobacterium nuc... 32 1.9 gb|AAC16695.1| unknown [Nicotiana repanda] >gi|4680282|gb|AAD276... 31 2.3 gb|AAL15423.1| merozoite surface antigen-2b [Babesia bovis] 31 2.3 sp|Q10156|LKH1_SCHPO Protein kinase lkh1 >gi|25527315|pir||JC779... 31 2.6 ref|NP_630955.1| putative DNA methylase [Streptomyces coelicolor... 31 2.6 ref|NP_600870.2| preprotein translocase subunit SecD [Corynebact... 31 2.7 ref|NP_593024.1| probable protein kinase [Schizosaccharomyces po... 31 2.8 gb|AAK19842.1|AF331924_7 SecD [Corynebacterium glutamicum] 31 2.8 gb|AAM71150.1|AF392883_1 growth hormone receptor [Parascalops br... 31 2.8 ref|NP_242889.1| BH2023~unknown [Bacillus halodurans] >gi|254901... 31 2.9 ref|NP_523408.2| pacman CG3291-PA [Drosophila melanogaster] >gi|... 31 3.0 emb|CAB43711.1| pacman protein [Drosophila melanogaster] 31 3.2 ref|NP_302194.1| putative TetR-family transcriptional regulator ... 31 3.3 ref|NP_275602.1| sensory transduction histidine kinase [Methanot... 31 3.6 ref|XP_316890.1| ENSANGP00000021430 [Anopheles gambiae] >gi|2129... 31 4.1 ref|NP_608779.1| CG3248-PA [Drosophila melanogaster] >gi|2508992... 31 4.1 gb|AAK15806.1| diversin [Mus musculus] 31 4.2 ref|NP_536719.2| ankyrin repeat domain 6; diversin [Mus musculus] 31 4.2 gb|EAA24243.1| Aspartyl aminopeptidase [Fusobacterium nucleatum ... 31 4.5 ref|NP_216714.1| mmpS3 [Mycobacterium tuberculosis H37Rv] >gi|15... 31 4.5 gb|AAL55830.1|AF318323_1 unknown [Homo sapiens] 31 4.6 ref|NP_603672.1| Aspartyl aminopeptidase [Fusobacterium nucleatu... 31 4.6 gb|AAD27608.1|AF121903_1 unknown [Nicotiana tabacum] 30 4.7 ref|NP_543167.1| Fas death domain-associated protein [Rattus nor... 30 5.1 ref|NP_697911.1| trigger factor [Brucella suis 1330] >gi|2334771... 30 6.2 gb|AAK31261.3| kinase anchoring protein AKAP [Mesocricetus auratus] 30 6.4 sp|Q8YGT8|TIG_BRUME Trigger factor (TF) 30 6.7 gb|AAG13932.1| muscle-specific protein [Homo sapiens] 30 7.1 sp|P17251|PTHR_CHICK Parathyroid hormone-related protein precurs... 30 7.1 ref|NP_539986.1| TRIGGER FACTOR, PPIASE [Brucella melitensis] >g... 30 7.1 ref|NP_057683.1| calcineurin-binding protein calsarcin-1; muscle... 30 7.2 gb|AAP36689.1| Homo sapiens myozenin 2 [synthetic construct] 30 7.2 ref|NP_567569.2| floral homeotic protein agamous (AGAMOUS) [Arab... 30 7.7 ref|NP_664528.1| conserved hypothetical protein - phage associat... 30 8.5 ref|XP_215692.1| similar to myozenin-like 2; calsarcin-1 [Mus mu... 30 8.6 gb|EAA22377.1| kinesin-related protein [Plasmodium yoelii yoelii] 30 8.6 emb|CAA75474.1| putative [Human papillomavirus type 80] 30 8.6 gb|AAL91365.1|AF403476_1 merozoite surface protein 5 [Plasmodium... 30 8.6 ref|NP_606634.1| hypothetical phage protein [Streptococcus pyoge... 30 8.8 gb|AAH28697.1| similar to rab11-binding protein [Homo sapiens] 30 9.0 pir||D96593 myosin-like protein, 97843-94399 [imported] - Arabid... 30 9.4 emb|CAD98010.1| hypothetical protein [Homo sapiens] 30 9.5 ref|NP_532349.1| trigger factor [Agrobacterium tumefaciens str. ... 30 9.5 emb|CAD58850.2| SMC1 protein cohesin subunit [Gallus gallus] 30 9.7 ref|NP_704294.1| ubiquitin-protein ligase 1, putative [Plasmodiu... 30 9.8 >ref|NP_173031.2| expressed protein [Arabidopsis thaliana] pir||C86292 F7H2.13 protein - Arabidopsis thaliana gb|AAF82149.1|AC034256_13 ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene. [Arabidopsis thaliana] gb|AAG48787.1|AF332424_1 unknown protein [Arabidopsis thaliana] Length = 179 Score = 227 bits (580), Expect = 2e-59 Identities = 148/148 (100%), Positives = 148/148 (100%) Query: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ Sbjct: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 Query: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS Sbjct: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 Query: 121 RQKNINALLDTLKKIVPHSGKEGIDELM 148 RQKNINALLDTLKKIVPHSGKEGIDELM Sbjct: 121 RQKNINALLDTLKKIVPHSGKEGIDELM 148 Score = 85.7 bits (211), Expect = 1e-16 Identities = 34/71 (47%), Positives = 47/71 (65%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ P SR + +N +++T K +P EG +EL +IAV EE +FN+A NQ +Y Sbjct: 109 TGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQEDY 168 Query: 64 LRQICMKMLNM 74 L +I +KM M Sbjct: 169 LGKISLKMRTM 179 >gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] Length = 1405 Score = 176 bits (447), Expect = 4e-44 Identities = 56/135 (41%), Positives = 77/135 (56%), Gaps = 6/135 (4%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ SR RIVNKIM+T + LPF +G NEL+KIA RFEEK++ AS+Q++Y Sbjct: 34 TGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDY 93 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN------NEPAVNTGDWRTQQP 117 LR+I +KML+ME+KSQNA +S +N P + N+ Q Sbjct: 94 LRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPGSMQNQVHNQGQSLPIPLSANQS 153 Query: 118 QDSRQKNINALLDTL 132 Q +Q + + + Sbjct: 154 QVRQQLLSQNIQNNM 168 Score = 72.3 bits (176), Expect = 1e-12 Identities = 25/50 (50%), Positives = 38/50 (76%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 P+ P E ++TGDWRTQ DSRQ+ +N ++DTLK+ +P SG++G++EL Sbjct: 23 PTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNEL 72 >ref|NP_173030.1| expressed protein [Arabidopsis thaliana] Length = 1335 Score = 175 bits (445), Expect = 8e-44 Identities = 69/128 (53%), Positives = 82/128 (63%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQT+Y Sbjct: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 LR+I MKML METKSQNAAGSS+A S+P N+ + G T Q Q + Sbjct: 79 LRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPTNQGQLLPGSLSTNQSQAPQPL 138 Query: 124 NINALLDT 131 + + Sbjct: 139 LSQTMQNN 146 Score = 78.0 bits (191), Expect = 2e-14 Identities = 33/50 (66%), Positives = 42/50 (84%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL Sbjct: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINEL 57 >pir||B86292 F7H2.12 protein - Arabidopsis thaliana gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene. [Arabidopsis thaliana] Length = 1366 Score = 161 bits (407), Expect = 2e-39 Identities = 69/159 (43%), Positives = 82/159 (51%), Gaps = 31/159 (19%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ--- 60 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQ Sbjct: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQRFV 78 Query: 61 ----------------------------TEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92 T+YLR+I MKML METKSQNAAGSS+A Sbjct: 79 RQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTMETKSQNAAGSSAAIPAAN 138 Query: 93 PLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDT 131 S+P N+ + G T Q Q + + + Sbjct: 139 NGTSIDSIPTNQGQLLPGSLSTNQSQAPQPLLSQTMQNN 177 Score = 78.4 bits (192), Expect = 2e-14 Identities = 33/50 (66%), Positives = 42/50 (84%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL Sbjct: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINEL 57 >gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] Length = 3148 Score = 143 bits (361), Expect = 4e-34 Identities = 52/105 (49%), Positives = 71/105 (67%), Gaps = 7/105 (6%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DWR SR RIVNKIM+T + LPF PEG NEL++IA RFEEK+F +A++Q++YLR Sbjct: 16 DWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQSDYLR 75 Query: 66 QICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 +I +KML+ME++SQNA+GS N PP P + ++T Sbjct: 76 KISLKMLSMESRSQNASGS-----NEPP--HPGIKPLTKEGLDTS 113 Score = 79.2 bits (194), Expect = 9e-15 Identities = 19/41 (46%), Positives = 29/41 (70%) Query: 107 VNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 ++ DWR DSRQ+ +N ++DTLK+ +P SG EG++EL Sbjct: 12 LDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNEL 52 >dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-group)] Length = 1359 Score = 142 bits (358), Expect = 9e-34 Identities = 51/93 (54%), Positives = 68/93 (72%) Query: 5 GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64 GDWR+Q S +R+RIVNKIM+T K LP PEG NEL+KIAVRFEEK++ A++Q++YL Sbjct: 35 GDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYL 94 Query: 65 RQICMKMLNMETKSQNAAGSSSADDNTPPLVPE 97 R+I +KML+METK+Q G++ N P E Sbjct: 95 RKISLKMLSMETKTQQNPGNAQVIQNQNPPGSE 127 Score = 74.6 bits (182), Expect = 2e-13 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 83 GSSSADDNTPPLVPEPSVPNN-EPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGK 141 G+ P PN PA+ GDWR+Q ++R + +N ++DTLKK +P S Sbjct: 7 GNWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVP 66 Query: 142 EGIDEL 147 EG++EL Sbjct: 67 EGLNEL 72 >dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)] Length = 414 Score = 102 bits (254), Expect = 1e-21 Identities = 19/64 (29%), Positives = 34/64 (52%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DWRT+ R R+ I+ + +L +L+K+A R EE+++ A + +YLR Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71 Query: 66 QICM 69 +I + Sbjct: 72 RISL 75 >pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) emb|CAA21993.1| possible regulatory protein [Candida albicans] Length = 1145 Score = 98.5 bits (244), Expect = 2e-20 Identities = 22/86 (25%), Positives = 40/86 (45%), Gaps = 2/86 (2%) Query: 7 WRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYLR 65 WR + R ++V I+ T +L P L K+A FE+ ++ ++++ +YLR Sbjct: 23 WRAMYSGEERQKVVQIIINTLT-ELHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLR 81 Query: 66 QICMKMLNMETKSQNAAGSSSADDNT 91 I MK+ + + Q A + N Sbjct: 82 AIKMKVHQLRVQKQQIAANQGGQINP 107 >dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonica cultivar-group)] Length = 87 Score = 51.5 bits (122), Expect = 2e-06 Identities = 9/37 (24%), Positives = 17/37 (45%) Query: 24 METQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 M +L +L+K+A R EE+++ A + Sbjct: 39 MPILQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDF 75 >ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] pir||E84491 hypothetical protein At2g10440 [imported] - Arabidopsis thaliana gb|AAD28655.1| hypothetical protein [Arabidopsis thaliana] Length = 935 Score = 43.4 bits (101), Expect = 7e-04 Identities = 16/56 (28%), Positives = 31/56 (54%), Gaps = 3/56 (5%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61 DWR+Q R ++++KI+E ++ N+ IA +FEE ++ A+++T Sbjct: 24 DWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---IASKFEENFYSIATDKT 76 >ref|NP_643335.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37871.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str. 306] Length = 534 Score = 39.5 bits (91), Expect = 0.009 Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 11/131 (8%) Query: 10 QFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM 69 + + +M+ + PE EL ++ +R + +++ Sbjct: 319 RHGLDHGQVVTEVLMDALT---HYSWPENLQELERVVLRLAVMTAGRPIGSAD-IQRHAP 374 Query: 70 KMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALL 129 ++L K ++ L EP+ P DW P Q+ L Sbjct: 375 RLLEGRVKGAQHDACATMSQ-PADLPAEPTPPGT-----PVDWIDGLPHRPGQRLAT-LH 427 Query: 130 DTLKKIVPHSG 140 D L++ + H G Sbjct: 428 DALRRALVHLG 438 >ref|NP_586100.1| MADS domain [Encephalitozoon cuniculi] emb|CAD25704.1| MADS domain [Encephalitozoon cuniculi] Length = 776 Score = 38.0 bits (87), Expect = 0.025 Identities = 20/113 (17%), Positives = 44/113 (38%), Gaps = 7/113 (6%) Query: 10 QFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM 69 R +++ K+ + F +++ A+R E++++ + ++ EYLR + Sbjct: 1 MLSQEERKQMILKLFVALKESNIFPGYTPVQ-IKEAAIRAEQRIYEESGSKEEYLRGMDE 59 Query: 70 KMLNMETKSQNAAGSSSADDNTPPLVPE--PSVPNNEPAVNTGDWRTQQPQDS 120 + +E + S D E S + P +++PQDS Sbjct: 60 RFQRIE----RVVSNRSRADGRGKSTQEQMGSYEHARPQFQGFRNGSEEPQDS 108 >ref|ZP_00043576.1| hypothetical protein [Magnetococcus sp. MC-1] Length = 682 Score = 34.9 bits (79), Expect = 0.23 Identities = 16/65 (24%), Positives = 25/65 (37%), Gaps = 5/65 (7%) Query: 67 ICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNIN 126 I + L ++ NA + N V N+P+ N D R Q R + Sbjct: 275 IAYRALLKSVRNTNAKAGTVVVMNPNNGEILALV--NQPSYNPNDLRHSQDHQRRNR--- 329 Query: 127 ALLDT 131 A++DT Sbjct: 330 AIMDT 334 >dbj|BAC45105.1| OJ1705_C03.27 [Oryza sativa (japonica cultivar-group)] Length = 194 Score = 34.1 bits (77), Expect = 0.33 Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 6 DWRTQFPSASRSRIVNKIM 24 DWRT+ R R+ + I+ Sbjct: 12 DWRTRLGQDIRDRVTHDIL 30 >ref|NP_217566.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] ref|NP_337653.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] ref|NP_856721.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] pir||E70861 hypothetical protein Rv3050c - Mycobacterium tuberculosis (strain H37RV) emb|CAA16135.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] gb|AAK47467.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] emb|CAD96763.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] Length = 246 Score = 33.4 bits (75), Expect = 0.58 Identities = 13/70 (18%), Positives = 38/70 (53%), Gaps = 1/70 (1%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYL 64 D R++ R ++ N+I++ + + + PE ++ + A + K++ + +++++ L Sbjct: 18 DARSERWREHRKKVRNEIVDAAFRAIDRLGPELSVRQIAEEAGTAKPKIYRHFTDKSDLL 77 Query: 65 RQICMKMLNM 74 I M++ +M Sbjct: 78 EAIGMRLRDM 87 >ref|NP_014019.1| Hypothetical ORF; Ymr291wp [Saccharomyces cerevisiae] sp|Q03533|KM8S_YEAST Probable serine/threonine-protein kinase YMR291W pir||S47452 probable serine/threonine-specific protein kinase (EC 2.7.1.-) YMR291w - yeast (Saccharomyces cerevisiae) emb|CAA56800.1| serine/threonine kinase [Saccharomyces cerevisiae] Length = 586 Score = 33.0 bits (74), Expect = 0.79 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 3/80 (3%) Query: 59 NQTEYLRQIC--MKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQ 116 + +R++ M + + S++ ++ A N E S + D + Sbjct: 370 SFHPTIRRVSSTASMHTLRSPSKSRKTTTLAYLNMDGGSSETSTAFSSKMDLP-DLYVDR 428 Query: 117 PQDSRQKNINALLDTLKKIV 136 +SR++++N + DTLKK + Sbjct: 429 TINSRERSLNRIRDTLKKTL 448 >ref|NP_774610.1| oxidoreductase [Bradyrhizobium japonicum] dbj|BAC53235.1| oxidoreductase [Bradyrhizobium japonicum USDA 110] Length = 470 Score = 33.0 bits (74), Expect = 0.81 Identities = 15/55 (27%), Positives = 21/55 (37%), Gaps = 8/55 (14%) Query: 101 PNNEPAVNTGDWRTQQPQDSR--------QKNINALLDTLKKIVPHSGKEGIDEL 147 + PA N DW PQ R Q +A+L K +P + G+ L Sbjct: 29 GTDVPARNCNDWSASLPQTPRAVIRPLDAQGVTDAILTCRKAHLPFVPQGGLTGL 83 >ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thaliana] dbj|BAB02507.1| CREB-binding protein-like [Arabidopsis thaliana] Length = 1670 Score = 33.0 bits (74), Expect = 0.86 Identities = 14/90 (15%), Positives = 38/90 (41%), Gaps = 7/90 (7%) Query: 16 RSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR------QIC 68 R ++N+ ++ P + + +L ++A R E ++ A+++ +YL ++ Sbjct: 44 RQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFRSFDVRVE 103 Query: 69 MKMLNMETKSQNAAGSSSADDNTPPLVPEP 98 + + ++ + SS + P V Sbjct: 104 STLKQLLSQRRANPSSSVSTMVQTPGVSHG 133 >ref|NP_657433.1| Glycos_transf_2, Glycosyl transferase [Bacillus anthracis A2012] ref|NP_845852.1| glycosyl transferase, group 2 family protein [Bacillus anthracis str. Ames] gb|AAP27338.1| glycosyl transferase, group 2 family protein [Bacillus anthracis str. Ames] Length = 851 Score = 32.6 bits (73), Expect = 0.95 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 5/57 (8%) Query: 62 EYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQ 118 +Y +QI +K +N+E K Q+ SS P V N P ++ Q Sbjct: 294 DYYQQIKLKKINLEKKKQHINNSSHL-----PKVSILIPAYNRPHYLELALKSALNQ 345 >ref|NP_341855.1| Conserved hypothetical protein [Sulfolobus solfataricus] pir||F90173 conserved hypothetical protein [imported] - Sulfolobus solfataricus gb|AAK40645.1| Conserved hypothetical protein [Sulfolobus solfataricus] Length = 275 Score = 32.2 bits (72), Expect = 1.3 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Query: 36 PEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM 69 P NELRK + FEE +F A +YL + M Sbjct: 170 PVNLNELRKYSHVFEE-IFKIAL--KDYLTAMKM 200 >ref|NP_250870.1| hypothetical protein [Pseudomonas aeruginosa PA01] pir||B83372 hypothetical protein PA2180 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG05568.1|AE004645_2 hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 458 Score = 32.2 bits (72), Expect = 1.5 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 8/63 (12%) Query: 89 DNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKN-------INALLDTLKKIVPHSGK 141 P +P P EPA GD +Q R+ + LL+ + H G Sbjct: 379 QAPAPADRDPLAPLAEPATAGGDVDAEQVALRRELLRLSPEQGVARLLELMAPH-RHHGP 437 Query: 142 EGI 144 G+ Sbjct: 438 AGL 440 >ref|NP_173115.1| expressed protein [Arabidopsis thaliana] Length = 1706 Score = 32.2 bits (72), Expect = 1.6 Identities = 12/67 (17%), Positives = 29/67 (42%), Gaps = 2/67 (2%) Query: 45 IAVRFEEKLFNNASNQTEYLRQICM--KMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN 102 +A R EE LF A + +Y+ + + ++ ++ Q + +++ P+ Sbjct: 104 VARRLEEGLFKMAVTKEDYMNRSTLESRITSLIKGRQINNYNQRHANSSSVGTMIPTPGL 163 Query: 103 NEPAVNT 109 ++ A N Sbjct: 164 SQTAGNP 170 >ref|NP_603126.1| Autolysin response regulator [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gb|AAL94425.1| Autolysin response regulator [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 240 Score = 31.8 bits (71), Expect = 1.9 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 13 SASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQ 66 S SR + + K + +L L+KI V +E+L+ + N +Y+ Sbjct: 105 SESRIKSLLKSLVNIKTELTSSVKNT--NLKKITVNIDERLYVISLNDIDYIEA 156 >gb|AAC16695.1| unknown [Nicotiana repanda] gb|AAD27606.1|AF121902_1 unknown [Nicotiana repanda] Length = 274 Score = 31.4 bits (70), Expect = 2.3 Identities = 19/68 (27%), Positives = 29/68 (41%), Gaps = 6/68 (8%) Query: 82 AGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD--SRQKNINAL-LDTLKKIVPH 138 G+S A N P S EPA + +D R++ + L L+T+K+ +P Sbjct: 120 PGNSEASLNQP---APDSPNPGEPAAPIAEVYHPLQEDGQRRRELSDRLSLNTIKRPLPE 176 Query: 139 SGKEGIDE 146 E I E Sbjct: 177 EIYEAIVE 184 >gb|AAL15423.1| merozoite surface antigen-2b [Babesia bovis] Length = 287 Score = 31.4 bits (70), Expect = 2.3 Identities = 15/72 (20%), Positives = 27/72 (36%), Gaps = 3/72 (4%) Query: 52 KLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLV---PEPSVPNNEPAVN 108 K++ + E L+++ K + + Q G+ A NT P+ P N P+ Sbjct: 185 KMYKAFNTYEELLKKMPSKTPSPTSSPQATPGAKPAAPNTSESAGGQPQQETPENRPSQA 244 Query: 109 TGDWRTQQPQDS 120 Q + S Sbjct: 245 PSPQSPPQTEQS 256 >sp|Q10156|LKH1_SCHPO Protein kinase lkh1 pir||JC7794 lammer kinase homolog protein 1, Lkh1 protein - fission yeast (Schizosaccharomyces pombe) gb|AAK12335.1| LAMMER kinase-like protein [Schizosaccharomyces pombe] emb|CAD29835.1| lkh1 [Schizosaccharomyces pombe] Length = 575 Score = 31.4 bits (70), Expect = 2.6 Identities = 13/42 (30%), Positives = 18/42 (41%) Query: 85 SSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNIN 126 SS PPL P P+N P + Q S+ K++N Sbjct: 94 SSPTSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVN 135 >ref|NP_630955.1| putative DNA methylase [Streptomyces coelicolor A3(2)] emb|CAB72390.1| putative DNA methylase [Streptomyces coelicolor A3(2)] Length = 251 Score = 31.4 bits (70), Expect = 2.6 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDS-RQKNINALLDTLKKIVPHSGKEG 143 P + P G + QP S RQ ++ ++++V S EG Sbjct: 148 PIDGSRNPVYLPGMYSASQPSGSQRQHITQKPVEVMRELVKIS-PEG 193 >ref|NP_600870.2| preprotein translocase subunit SecD [Corynebacterium glutamicum ATCC 13032] dbj|BAB99051.1| Preprotein translocase subunit SecD [Corynebacterium glutamicum ATCC 13032] Length = 644 Score = 31.4 bits (70), Expect = 2.7 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 10/74 (13%) Query: 32 PFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNT 91 PF N + ++ EE+ N ++ EYL++I K NAA ++ DN+ Sbjct: 576 PFFAKSSVNGMGRVMKLVEERRANGELDEPEYLKKIHAK---------NAAADKASTDNS 626 Query: 92 PPLVPE-PSVPNNE 104 E P N+ Sbjct: 627 STDNSEAPGTDTNQ 640 >ref|NP_593024.1| probable protein kinase [Schizosaccharomyces pombe] pir||T38052 probable protein kinase - fission yeast (Schizosaccharomyces pombe) Length = 690 Score = 31.0 bits (69), Expect = 2.8 Identities = 13/42 (30%), Positives = 18/42 (41%) Query: 85 SSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNIN 126 SS PPL P P+N P + Q S+ K++N Sbjct: 209 SSPTSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVN 250 >gb|AAK19842.1|AF331924_7 SecD [Corynebacterium glutamicum] Length = 637 Score = 31.0 bits (69), Expect = 2.8 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 10/74 (13%) Query: 32 PFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNT 91 PF N + ++ EE+ N ++ EYL++I K NAA ++ DN+ Sbjct: 569 PFFAKSSVNGMGRVMKLVEERRANGELDEPEYLKKIHAK---------NAAADKASTDNS 619 Query: 92 PPLVPE-PSVPNNE 104 E P N+ Sbjct: 620 STDNSEAPGTDTNQ 633 >gb|AAM71150.1|AF392883_1 growth hormone receptor [Parascalops breweri] Length = 302 Score = 31.0 bits (69), Expect = 2.8 Identities = 12/60 (20%), Positives = 26/60 (43%) Query: 71 MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLD 130 +L ++ ++QN + + + P V P + G T Q S+ N+++L + Sbjct: 97 LLCLDQQNQNNSPNDAPPSTQQPSVSPTQENKPRPLLIGGTESTPQASHSQLSNLSSLAN 156 >ref|NP_242889.1| BH2023~unknown [Bacillus halodurans] pir||G83902 hypothetical protein BH2023 [imported] - Bacillus halodurans (strain C-125) dbj|BAB05742.1| BH2023~unknown [Bacillus halodurans] Length = 921 Score = 31.0 bits (69), Expect = 2.9 Identities = 14/35 (40%), Positives = 16/35 (45%) Query: 17 SRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEE 51 SR V ++ ET L L F PE IA R E Sbjct: 384 SRAVREVDETILVALHFTNPETPGRYETIAQRLYE 418 >ref|NP_523408.2| pacman CG3291-PA [Drosophila melanogaster] gb|AAF48958.1| CG3291-PA [Drosophila melanogaster] gb|AAK93099.1| LD22664p [Drosophila melanogaster] Length = 1612 Score = 31.0 bits (69), Expect = 3.0 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 11/59 (18%) Query: 75 ETKSQNAAGSSSADD-NTPPLVPEP----------SVPNNEPAVNTGDWRTQQPQDSRQ 122 +T+S A + S + P VP P S P N+P +WR + +Q Sbjct: 1198 KTRSDPIARTDSYKPSSEPKPVPVPEQITNWRERVSTPTNKPQPAPNNWRINRSSSRQQ 1256 >emb|CAB43711.1| pacman protein [Drosophila melanogaster] Length = 1613 Score = 31.0 bits (69), Expect = 3.2 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 11/59 (18%) Query: 75 ETKSQNAAGSSSADD-NTPPLVPEP----------SVPNNEPAVNTGDWRTQQPQDSRQ 122 +T+S A + S + P VP P S P N+P +WR + +Q Sbjct: 1198 KTRSSPIARTDSYKPSSEPKPVPVPEQITNWRERVSTPTNKPQPAPNNWRINRSSSRQQ 1256 >ref|NP_302194.1| putative TetR-family transcriptional regulator [Mycobacterium leprae] pir||G87125 probable TetR-family transcription regulator [imported] - Mycobacterium leprae emb|CAC30686.1| putative TetR-family transcriptional regulator [Mycobacterium leprae] Length = 275 Score = 31.0 bits (69), Expect = 3.3 Identities = 12/70 (17%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYL 64 D R++ R ++ +I++ + L + PE E+ + A + K++ + +++++ Sbjct: 47 DARSERWREHRKKVRGEIVDAAFRALDRLGPEVSVREIAEEAGTAKPKIYRHFTDKSDLF 106 Query: 65 RQICMKMLNM 74 I +++ +M Sbjct: 107 EAIGIRLRDM 116 >ref|NP_275602.1| sensory transduction histidine kinase [Methanothermobacter thermautotrophicus] pir||A69160 sensory transduction histidine kinase - Methanobacterium thermoautotrophicum (strain Delta H) gb|AAB84965.1| sensory transduction histidine kinase [Methanothermobacter thermautotrophicus str. Delta H] Length = 495 Score = 30.7 bits (68), Expect = 3.6 Identities = 20/93 (21%), Positives = 33/93 (34%), Gaps = 24/93 (25%) Query: 8 RTQFPSASRSRIV--NKIMETQLKQLP------------FIRPEGTNELRKIAVRF---- 49 R Q + R + V +I L E N LR +R Sbjct: 288 RNQLRESLREKEVLLREIHHRVKNNLQIVASLLSLQTAYTDNQETLNVLRDSQMRVRAMA 347 Query: 50 --EEKLFNNAS----NQTEYLRQICMKMLNMET 76 EK++ ++S N +YLR I +M +++ Sbjct: 348 VAHEKIYRSSSLSMINVGDYLRAIAEEMTTLQS 380 >ref|XP_316890.1| ENSANGP00000021430 [Anopheles gambiae] gb|EAA12049.1| ENSANGP00000021430 [Anopheles gambiae str. PEST] Length = 1146 Score = 30.7 bits (68), Expect = 4.1 Identities = 13/43 (30%), Positives = 22/43 (50%) Query: 40 NELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAA 82 E R +AV +++ A+N ++LR I M E +S A+ Sbjct: 297 IETRLVAVAIQKRSHEYAANFEDFLRIIDMTQTVEELQSIRAS 339 >ref|NP_608779.1| CG3248-PA [Drosophila melanogaster] sp|Q961G1|COG3_DROME Putative conserved oligomeric Golgi complex component 3 gb|AAK93037.1| GH25768p [Drosophila melanogaster] gb|AAF51107.2| CG3248-PA [Drosophila melanogaster] Length = 905 Score = 30.7 bits (68), Expect = 4.1 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 11/88 (12%) Query: 55 NNASNQTEYLRQICMKMLNMETKSQNAAGSSSADD-----------NTPPLVPEPSVPNN 103 ++ E LR+I +++ E+K+ A S + ++ P P P+ P Sbjct: 5 ERIQSENENLRKIRNRLMQWESKTDPLAALSIQQEEHLDVLTNLWRDSGPSAPAPTTPTQ 64 Query: 104 EPAVNTGDWRTQQPQDSRQKNINALLDT 131 ++ T Q D + L +T Sbjct: 65 VGPTDSSAAATSQSGDDIRLPAEGLQNT 92 >gb|AAK15806.1| diversin [Mus musculus] Length = 712 Score = 30.7 bits (68), Expect = 4.2 Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 2/103 (1%) Query: 23 IMETQLKQ-LPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM-KMLNMETKSQN 80 +++ + + L R E N L++ A +++ + + L+ CM K+ ++E + Sbjct: 459 VLDKLMVERLSAERTECMNRLQQHAAAEKQEGEKRQMSLVDELKAWCMLKIQSLELRLSG 518 Query: 81 AAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 + + A PP P+V A G Q R K Sbjct: 519 ESRTFRAKSTPPPSDSTPAVDQPVVAAGPGAASDSSSQVVRPK 561 >ref|NP_536719.2| ankyrin repeat domain 6; diversin [Mus musculus] Length = 712 Score = 30.7 bits (68), Expect = 4.2 Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 2/103 (1%) Query: 23 IMETQLKQ-LPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM-KMLNMETKSQN 80 +++ + + L R E N L++ A +++ + + L+ CM K+ ++E + Sbjct: 459 VLDKLMVERLSAERTECMNRLQQHAAAEKQEGEKRQMSLVDELKAWCMLKIQSLELRLSG 518 Query: 81 AAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 + + A PP P+V A G Q R K Sbjct: 519 ESRTFRAKSTPPPSDSTPAVDQPVVAAGPGAASDSSSQVVRPK 561 >gb|EAA24243.1| Aspartyl aminopeptidase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 429 Score = 30.7 bits (68), Expect = 4.5 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 7/54 (12%) Query: 64 LRQICMKM-LNMETKSQNAAGSSSADDNT-----PPLVPEPSVPNNEPAVNTGD 111 L +I M L+ E + Q A +S N P E S P NEP +N G Sbjct: 284 LERISNAMKLSFE-EHQQALSNSFVISNDAAHSIHPNYLEKSDPTNEPKINGGP 336 >ref|NP_216714.1| mmpS3 [Mycobacterium tuberculosis H37Rv] ref|NP_336726.1| hypothetical protein [Mycobacterium tuberculosis CDC1551] ref|NP_855870.1| PROBABLE CONSERVED MEMBRANE PROTEIN MMPS3 [Mycobacterium bovis subsp. bovis AF2122/97] sp|Q10390|MMS3_MYCTU Putative membrane protein MMPS3 pir||G70784 probable mmpS3 protein - Mycobacterium tuberculosis (strain H37RV) emb|CAA94267.1| mmpS3 [Mycobacterium tuberculosis H37Rv] gb|AAK46540.1| hypothetical protein [Mycobacterium tuberculosis CDC1551] emb|CAD97074.1| PROBABLE CONSERVED MEMBRANE PROTEIN MMPS3 [Mycobacterium bovis subsp. bovis AF2122/97] Length = 299 Score = 30.7 bits (68), Expect = 4.5 Identities = 10/28 (35%), Positives = 12/28 (42%) Query: 91 TPPLVPEPSVPNNEPAVNTGDWRTQQPQ 118 P EP P +EP +TGD R Sbjct: 4 PNPPGREPDEPESEPVSDTGDERASGNH 31 >gb|AAL55830.1|AF318323_1 unknown [Homo sapiens] Length = 310 Score = 30.7 bits (68), Expect = 4.6 Identities = 14/70 (20%), Positives = 24/70 (34%) Query: 72 LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDT 131 L+ + + Q + + P + P PA G TQ+P R ++ Sbjct: 46 LSFQKRGQLCSPLGTPPPAQIPSAEKKPDPPVRPARPPGPLVTQEPHLGRNGMGASVPTN 105 Query: 132 LKKIVPHSGK 141 + HSG Sbjct: 106 PPPPLCHSGP 115 >ref|NP_603672.1| Aspartyl aminopeptidase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gb|AAL94971.1| Aspartyl aminopeptidase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 429 Score = 30.7 bits (68), Expect = 4.6 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 7/54 (12%) Query: 64 LRQICMKM-LNMETKSQNAAGSSSADDNT-----PPLVPEPSVPNNEPAVNTGD 111 L +I M L+ E + Q A +S N P E S P NEP +N G Sbjct: 284 LERISNAMKLSFE-EHQQALANSFVISNDAAHSIHPNYLEKSDPTNEPKINAGP 336 >gb|AAD27608.1|AF121903_1 unknown [Nicotiana tabacum] Length = 274 Score = 30.3 bits (67), Expect = 4.7 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 6/68 (8%) Query: 82 AGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD--SRQKNINAL-LDTLKKIVPH 138 G+S A N P S EPA + +D R++ + L ++T+K+ +P Sbjct: 120 PGNSEASLNQP---APDSPNPGEPAAPIAEVYHPLQEDGQRRRELSDRLSINTVKRPLPE 176 Query: 139 SGKEGIDE 146 E I E Sbjct: 177 DISEAIIE 184 >ref|NP_543167.1| Fas death domain-associated protein [Rattus norvegicus] sp|Q8VIB2|DAXX_RAT Death domain-associated protein 6 (Daxx) dbj|BAB83524.1| Daxx [Rattus norvegicus] Length = 731 Score = 30.3 bits (67), Expect = 5.1 Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 2/88 (2%) Query: 41 ELRKIAVRFEEKLFNNASNQTEYLRQIC--MKMLNMETKSQNAAGSSSADDNTPPLVPEP 98 E R I R + N + Y+ ++C +K +++ K A +S+ P P Sbjct: 104 EFRNILSRVLSRSRNRPAKLYVYINELCTVLKAHSIKKKLNLAPAASAESSGDNPPTDPP 163 Query: 99 SVPNNEPAVNTGDWRTQQPQDSRQKNIN 126 S N + RT+ + Q+ Sbjct: 164 SDLTNTETTASEASRTRGSRRQIQRLEQ 191 >ref|NP_697911.1| trigger factor [Brucella suis 1330] gb|AAN29826.1|AE014393_1 trigger factor [Brucella suis 1330] Length = 485 Score = 29.9 bits (66), Expect = 6.2 Identities = 5/33 (15%), Positives = 15/33 (45%) Query: 9 TQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE 41 +Q+ +R ++ +I++ F P+ + Sbjct: 290 SQYGQVTRQKVKRQILDALDGDYQFETPQKLVD 322 >gb|AAK31261.3| kinase anchoring protein AKAP [Mesocricetus auratus] Length = 818 Score = 29.9 bits (66), Expect = 6.4 Identities = 24/95 (25%), Positives = 41/95 (42%), Gaps = 22/95 (23%) Query: 39 TNELRKIAVRFEEKLFNNASN--------QTEYLR------------QICMKMLNMETKS 78 N+L+K A+ F+ L +AS+ + +Y + Q+ M LN +S Sbjct: 104 LNDLQKYALGFQHALSPSASSCKHKVGDLEGDYHKIPSENCYSVYADQLNMDFLNKGPQS 163 Query: 79 --QNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGD 111 A S + ++N P P P+N+ +V T D Sbjct: 164 LRLEMAASKNTNNNQSPSNPAAKSPSNQRSVATSD 198 >sp|Q8YGT8|TIG_BRUME Trigger factor (TF) Length = 477 Score = 29.9 bits (66), Expect = 6.7 Identities = 5/33 (15%), Positives = 15/33 (45%) Query: 9 TQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE 41 +Q+ +R ++ +I++ F P+ + Sbjct: 282 SQYGQITRQKVKRQILDALDGDYQFETPQKLVD 314 >gb|AAG13932.1| muscle-specific protein [Homo sapiens] Length = 264 Score = 29.9 bits (66), Expect = 7.1 Identities = 25/93 (26%), Positives = 33/93 (34%), Gaps = 5/93 (5%) Query: 19 IVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEK-LFNNASNQTEYLRQICMKMLNMETK 77 I IM +L L L K+ R +K F N Q+ + M N + Sbjct: 38 IPRDIMLEELSHLSNRGA----RLFKMRQRRSDKYTFENFQYQSRAQINHSIAMQNGKVD 93 Query: 78 SQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 N G S TPP P+P P N + G Sbjct: 94 GSNLEGGSQQAPLTPPNTPDPRSPPNPDNIAPG 126 >sp|P17251|PTHR_CHICK Parathyroid hormone-related protein precursor (PTH-rP) (PTHrP) pir||S10202 parathyroid hormone-related protein precursor - chicken emb|CAA36376.1| prepropeptide (176 AA) [Gallus gallus] Length = 176 Score = 29.9 bits (66), Expect = 7.1 Identities = 17/85 (20%), Positives = 33/85 (38%) Query: 37 EGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVP 96 EG + K AV + L + + + R+I ++ L + +S N P Sbjct: 29 EGISRRLKRAVSEHQLLHDKGKSIQDLRRRIFLQNLIEGVNTAEIRATSEVSPNPKPATN 88 Query: 97 EPSVPNNEPAVNTGDWRTQQPQDSR 121 + P + + G + TQ+ S+ Sbjct: 89 TKNYPVRFGSEDEGRYLTQETNKSQ 113 >ref|NP_539986.1| TRIGGER FACTOR, PPIASE [Brucella melitensis] pir||AG3385 peptidylprolyl isomerase (EC 5.2.1.8) [imported] - Brucella melitensis (strain 16M) gb|AAL52250.1| TRIGGER FACTOR, PPIASE [Brucella melitensis 16M] Length = 485 Score = 29.9 bits (66), Expect = 7.1 Identities = 5/33 (15%), Positives = 15/33 (45%) Query: 9 TQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE 41 +Q+ +R ++ +I++ F P+ + Sbjct: 290 SQYGQITRQKVKRQILDALDGDYQFETPQKLVD 322 >ref|NP_057683.1| calcineurin-binding protein calsarcin-1; muscle-specific protein; FATZ related protein 2; chromosome 4 open reading frame 5; calsarcin-1 [Homo sapiens] gb|AAF63623.1|AF249873_1 muscle-specific protein [Homo sapiens] emb|CAB92965.1| FATZ related protein 2 [Homo sapiens] gb|AAG38938.1| calcineurin-binding protein calsarcin-1 [Homo sapiens] gb|AAH05195.1|AAH05195 calcineurin-binding protein calsarcin-1 [Homo sapiens] gb|AAH17402.1|AAH17402 chromosome 4 open reading frame 5 [Homo sapiens] gb|AAH20932.1|AAH20932 myozenin 2 [Homo sapiens] gb|AAP35878.1| myozenin 2 [Homo sapiens] Length = 264 Score = 29.9 bits (66), Expect = 7.2 Identities = 25/93 (26%), Positives = 33/93 (34%), Gaps = 5/93 (5%) Query: 19 IVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEK-LFNNASNQTEYLRQICMKMLNMETK 77 I IM +L L L K+ R +K F N Q+ + M N + Sbjct: 38 IPRDIMLEELSHLSNRGA----RLFKMRQRRSDKYTFENFQYQSRAQINHSIAMQNGKVD 93 Query: 78 SQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 N G S TPP P+P P N + G Sbjct: 94 GSNLEGGSQQAPLTPPNTPDPRSPPNPDNIAPG 126 >gb|AAP36689.1| Homo sapiens myozenin 2 [synthetic construct] Length = 265 Score = 29.9 bits (66), Expect = 7.2 Identities = 25/93 (26%), Positives = 33/93 (34%), Gaps = 5/93 (5%) Query: 19 IVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEK-LFNNASNQTEYLRQICMKMLNMETK 77 I IM +L L L K+ R +K F N Q+ + M N + Sbjct: 38 IPRDIMLEELSHLSNRGA----RLFKMRQRRSDKYTFENFQYQSRAQINHSIAMQNGKVD 93 Query: 78 SQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 N G S TPP P+P P N + G Sbjct: 94 GSNLEGGSQQAPLTPPNTPDPRSPPNPDNIAPG 126 >ref|NP_567569.2| floral homeotic protein agamous (AGAMOUS) [Arabidopsis thaliana] Length = 310 Score = 29.9 bits (66), Expect = 7.7 Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 13/122 (10%) Query: 11 FPSAS---RSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNAS-------NQ 60 + S R +I++ + I ELR + R E + S ++ Sbjct: 164 YQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSE 223 Query: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 +Y+++ + + N +Q + ++ P + +N + QP DS Sbjct: 224 IDYMQKREVDLHN---DNQILRAKIAENERNNPSISLMPGGSNYEQLMPPPQTQSQPFDS 280 Query: 121 RQ 122 R Sbjct: 281 RN 282 >ref|NP_664528.1| conserved hypothetical protein - phage associated [Streptococcus pyogenes phage 315.1] ref|NP_795416.1| putative tail fiber protein [Streptococcus pyogenes phage 315.1] gb|AAM79331.1| conserved hypothetical protein - phage associated [Streptococcus pyogenes phage 315.1] Length = 683 Score = 29.5 bits (65), Expect = 8.5 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 3 TTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62 T GD+ T SRSR + + L I G ++ E+++ + Sbjct: 369 TLGDYSTVQNRESRSR-KEAVQNMINESLETITGLGMT-FQEFLQDIEKRIETGKKEMED 426 Query: 63 YLRQICMKMLNMETK 77 R++ ++ N + K Sbjct: 427 NWRKVNLEFDNFKKK 441 >ref|XP_215692.1| similar to myozenin-like 2; calsarcin-1 [Mus musculus] [Rattus norvegicus] Length = 264 Score = 29.5 bits (65), Expect = 8.6 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 3/72 (4%) Query: 41 ELRKIAVRFEEKLFNNASNQTEYLRQI--CMKMLNMETKSQNAAGSSSADDNTPPLVPEP 98 L K+ R +K + + Q E QI + M N N G S +TPP P+P Sbjct: 56 RLFKMRQRRSDK-YTFENFQYETKAQINHNLAMQNGRIDGSNLEGGSQQAPSTPPNTPDP 114 Query: 99 SVPNNEPAVNTG 110 P N + G Sbjct: 115 RSPPNPENIAPG 126 >gb|EAA22377.1| kinesin-related protein [Plasmodium yoelii yoelii] Length = 689 Score = 29.5 bits (65), Expect = 8.6 Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 11/115 (9%) Query: 18 RIVNKIMETQ-----LKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKML 72 R++N + + QL NE +KI + ++ + N+ ++ E+ + I Sbjct: 302 RVLNSSLSSLNKMLRKMQLTSSTLTMANECKKIKSKRKQLFYVNSESREEFFKNIK---- 357 Query: 73 NMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINA 127 E + S S N E NE + ++Q +I+ Sbjct: 358 -TEGNTHATTNSGSKKTNAKNETNE-MDETNENQFKGTKQNNAHSKSTQQIDIHN 410 >emb|CAA75474.1| putative [Human papillomavirus type 80] Length = 235 Score = 29.5 bits (65), Expect = 8.6 Identities = 11/53 (20%), Positives = 17/53 (31%), Gaps = 2/53 (3%) Query: 83 GSSSADDNTPPLVPEPSVPN--NEPAVNTGDWRTQQPQDSRQKNINALLDTLK 133 G D N P PN E + R Q + ++ ++ LK Sbjct: 173 GGPQHDPNQGPSQDPDPDPNRDQEGLLQGVALRLQTWEVQFNHLVDNIMGDLK 225 >gb|AAL91365.1|AF403476_1 merozoite surface protein 5 [Plasmodium vivax] Length = 387 Score = 29.5 bits (65), Expect = 8.6 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Query: 74 METKSQNAAGSSSADDNTPPLVPEPSVPNNEPAV-NTGDWRTQQPQDSRQKNINALLDTL 132 +E+K+ +A S D+ P + S P N GD + P+ + + LD L Sbjct: 231 LESKTADAKVSEHKADDANPGGNKDSPEGESPKEGNPGDPSQENPEAAGDDDSRLHLDNL 290 Query: 133 KKIVPH 138 VPH Sbjct: 291 DDKVPH 296 >ref|NP_606634.1| hypothetical phage protein [Streptococcus pyogenes MGAS8232] gb|AAL97133.1| hypothetical phage protein [Streptococcus pyogenes MGAS8232] Length = 683 Score = 29.5 bits (65), Expect = 8.8 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Query: 3 TTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62 T GD+ T SRSR + + L I G ++ E+++ + Sbjct: 369 TLGDYSTVQNRESRSR-KEAVQNMINESLETITGLGMT-FQEFLQDIEKRIETGKKEMED 426 Query: 63 YLRQICMKMLNMETK 77 R++ ++ N + K Sbjct: 427 NWRKVNLEFDNFKKK 441 >gb|AAH28697.1| similar to rab11-binding protein [Homo sapiens] Length = 913 Score = 29.5 bits (65), Expect = 9.0 Identities = 17/99 (17%), Positives = 40/99 (40%), Gaps = 13/99 (13%) Query: 43 RKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN 102 +++ +K+ + +++ K+L +E S ++ G +D T + + + Sbjct: 53 QELKQDVSKKIIESIIEESQ-------KVLQLEDDSLDSKGKELSDQATASPIVARTDLS 105 Query: 103 NEPAVNTGDWRTQQPQDSRQKNINALLD----TLKKIVP 137 N P + D P++S++ + LKK P Sbjct: 106 NIPGLLAID--QVLPEESQKAESQNTFEETELELKKCFP 142 >pir||D96593 myosin-like protein, 97843-94399 [imported] - Arabidopsis thaliana gb|AAG51576.1|AC027034_22 myosin-like protein; 97843-94399 [Arabidopsis thaliana] Length = 360 Score = 29.5 bits (65), Expect = 9.4 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 16/70 (22%) Query: 48 RFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAV 107 RFE KLF A++ E L M++L +K + A P N P Sbjct: 268 RFERKLFTVATSFGETL---KMQLLVARSKRRRA-------------TSLPRDGNYLPRS 311 Query: 108 NTGDWRTQQP 117 G Sbjct: 312 ELGSLNRNNS 321 >emb|CAD98010.1| hypothetical protein [Homo sapiens] Length = 913 Score = 29.5 bits (65), Expect = 9.5 Identities = 17/99 (17%), Positives = 40/99 (40%), Gaps = 13/99 (13%) Query: 43 RKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN 102 +++ +K+ + +++ K+L +E S ++ G +D T + + + Sbjct: 53 QELKQDVSKKIIESIIEESQ-------KVLQLEDDSLDSKGKELSDQATASPIVARTDLS 105 Query: 103 NEPAVNTGDWRTQQPQDSRQKNINALLD----TLKKIVP 137 N P + D P++S++ + LKK P Sbjct: 106 NIPGLLAID--QVLPEESQKAESQNTFEETELELKKCFP 142 >ref|NP_532349.1| trigger factor [Agrobacterium tumefaciens str. C58 (U. Washington)] sp|Q8UEU0|TIG_AGRT5 Trigger factor (TF) pir||AC2781 trigger factor [imported] - Agrobacterium tumefaciens (strain C58, Dupont) gb|AAL42665.1| trigger factor [Agrobacterium tumefaciens str. C58 (U. Washington)] Length = 492 Score = 29.5 bits (65), Expect = 9.5 Identities = 8/37 (21%), Positives = 18/37 (48%) Query: 5 GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE 41 G +QF + +R ++ +I++ + F P G + Sbjct: 278 GQIESQFGNVTRQKVKRQILDQLDEMYKFDTPAGLVD 314 >emb|CAD58850.2| SMC1 protein cohesin subunit [Gallus gallus] Length = 1234 Score = 29.5 bits (65), Expect = 9.7 Identities = 11/42 (26%), Positives = 18/42 (42%) Query: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNEL 42 M+ GD R +SR + +IM++ + P EL Sbjct: 481 MEQLGDARIDRQESSRQQRKAEIMDSIKRLYPGSVYGRLIEL 522 >ref|NP_704294.1| ubiquitin-protein ligase 1, putative [Plasmodium falciparum 3D7] emb|CAD51113.1| ubiquitin-protein ligase 1, putative [Plasmodium falciparum 3D7] Length = 8591 Score = 29.5 bits (65), Expect = 9.8 Identities = 18/115 (15%), Positives = 40/115 (34%), Gaps = 2/115 (1%) Query: 18 RIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNN-ASNQTEYLRQICMKMLNMET 76 ++ + I+++ + + +L+KI K FN + + ++ L Q + + T Sbjct: 7514 KLKDLIVQSLKRHTHVLIKRIIYDLKKIVHSIHNKTFNIYSVDHSDSLEQKLIAFYRVIT 7573 Query: 77 KSQNAAGSSSADDNTPPLVPEPSVP-NNEPAVNTGDWRTQQPQDSRQKNINALLD 130 NA + N L ++ NN + P N + + Sbjct: 7574 ILFNAPTLIDSITNKNDLNKSDTINLNNTNNSISNVEGVNTPVQENDHINNNISN 7628 Searching..................................................done Results from round 4 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: ref|NP_173031.2| expressed protein [Arabidopsis thaliana] >gi|25... 221 1e-57 ref|NP_173030.1| expressed protein [Arabidopsis thaliana] 182 9e-46 gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 173 3e-43 pir||B86292 F7H2.12 protein - Arabidopsis thaliana >gi|8927657|g... 167 3e-41 gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 149 6e-36 dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-gro... 140 5e-33 pir||T18235 transcription activator GAL11 homolog - yeast (Candi... 106 5e-23 dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-g... 104 2e-22 ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] >gi... 75 2e-13 dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonica cultivar-g... 58 2e-08 Sequences not found previously or not previously below threshold: ref|NP_643335.1| transcriptional regulator [Xanthomonas axonopod... 41 0.003 pir||T13828 CREB-binding protein homolog - fruit fly (Drosophila... 39 0.012 ref|NP_524642.2| nejire CG15319-PB [Drosophila melanogaster] >gi... 39 0.016 pir||S41033 hypothetical protein K03H1.10 - Caenorhabditis elega... 38 0.020 ref|NP_499201.1| TAZ zinc finger and KIX domain containing prote... 38 0.022 pir||S60123 hypothetical protein R10E11.1 - Caenorhabditis elegans 37 0.044 ref|NP_499161.1| CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis ... 37 0.045 ref|NP_499160.1| CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis ... 37 0.047 ref|NP_586100.1| MADS domain [Encephalitozoon cuniculi] >gi|1906... 36 0.11 pir||FGRTA fibrinogen alpha chain precursor - rat 36 0.13 gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [Homo sapiens] 35 0.24 gb|AAL54859.1| CREB-binding protein [Aplysia californica] 34 0.28 dbj|BAC45105.1| OJ1705_C03.27 [Oryza sativa (japonica cultivar-g... 34 0.38 ref|NP_001420.1| E1A binding protein p300; E1A-binding protein, ... 34 0.40 ref|ZP_00043576.1| hypothetical protein [Magnetococcus sp. MC-1] 33 0.72 ref|XP_240098.1| hypothetical protein XP_240098 [Rattus norvegicus] 33 0.74 ref|NP_524209.2| Chitin synthase 2 CG7464-PA [Drosophila melanog... 33 0.77 ref|NP_217566.1| hypothetical protein Rv3050c [Mycobacterium tub... 33 0.86 ref|NP_774610.1| oxidoreductase [Bradyrhizobium japonicum] >gi|2... 33 1.00 ref|NP_505434.1| Heavy chain, Unconventional Myosin HUM-2 (hum-2... 33 1.2 ref|NP_505433.1| Heavy chain, Unconventional Myosin HUM-2 (209.9... 33 1.2 gb|AAA97926.1| hum-2 [Caenorhabditis elegans] 33 1.2 ref|ZP_00120204.1| hypothetical protein [Cytophaga hutchinsonii] 33 1.2 ref|NP_044842.1| unknown [murid herpesvirus 4] >gi|1888433|emb|C... 33 1.2 pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thali... 32 1.2 sp|P06399|FIBA_RAT Fibrinogen alpha/alpha-E chain precursor [Con... 32 1.3 ref|NP_013060.1| vacuolar Protein Sorting; Vps13p [Saccharomyces... 32 1.3 gb|AAO12436.1| Heavy chain, unconventional myosin protein 2, iso... 32 1.4 gb|AAO12435.1| Heavy chain, unconventional myosin protein 2, iso... 32 1.4 ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thal... 32 1.4 ref|NP_173115.1| expressed protein [Arabidopsis thaliana] 32 1.5 ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [A... 32 1.6 ref|NP_341855.1| Conserved hypothetical protein [Sulfolobus solf... 32 1.6 ref|NP_250870.1| hypothetical protein [Pseudomonas aeruginosa PA... 32 1.9 gb|AAB59959.1| neural cell adhesion molecule 32 2.0 ref|XP_143369.1| similar to protocadherin 16 precursor; fibrobla... 32 2.0 ref|ZP_00053646.1| hypothetical protein [Magnetospirillum magnet... 32 2.1 gb|EAA19098.1| hypothetical protein [Plasmodium yoelii yoelii] 31 2.1 ref|NP_695693.1| DNA polymerase III subunit gamma/tau [Bifidobac... 31 2.1 ref|ZP_00121363.1| hypothetical protein [Bifidobacterium longum ... 31 2.2 gb|AAA16565.1| SDC25 protein [Saccharomyces cerevisiae] 31 2.3 ref|NP_657433.1| Glycos_transf_2, Glycosyl transferase [Bacillus... 31 2.3 ref|NP_499770.1| XPG N-terminal domain and XPG I-region (72.1 kD... 31 2.3 sp|P13590|NCA1_CHICK Neural cell adhesion molecule 1, 180 kDa is... 31 2.3 pir||IJCHNL neural cell adhesion molecule long domain form precu... 31 2.3 ref|NP_603126.1| Autolysin response regulator [Fusobacterium nuc... 31 2.4 pir||T29311 hypothetical protein F36D4.3 - Caenorhabditis elegans 31 2.4 ref|NP_697911.1| trigger factor [Brucella suis 1330] >gi|2334771... 31 2.4 ref|NP_741152.1| Putative nuclear protein, nematode specific [Ca... 31 2.5 pir||S14177 SCD25 protein (version 1) - yeast (Saccharomyces cer... 31 2.5 ref|NP_050006.1| multifunctional protein [Sugarcane yellow leaf ... 31 2.6 ref|NP_536719.2| ankyrin repeat domain 6; diversin [Mus musculus] 31 2.6 gb|AAK15806.1| diversin [Mus musculus] 31 2.7 sp|Q8YGT8|TIG_BRUME Trigger factor (TF) 31 2.8 gb|AAP21786.1| multifunctional protein [Sugarcane yellow leaf vi... 31 2.8 ref|NP_440126.1| hybrid sensory kinase [Synechocystis sp. PCC 68... 31 2.9 ref|NP_539986.1| TRIGGER FACTOR, PPIASE [Brucella melitensis] >g... 31 2.9 pir||E89403 protein C06H5.4 [imported] - Caenorhabditis elegans 31 2.9 gb|AAO12437.1| Heavy chain, unconventional myosin protein 2, iso... 31 3.0 ref|NP_507512.1| Predicted CDS, putative cytoplasmic protein, ne... 31 3.0 ref|NP_216714.1| mmpS3 [Mycobacterium tuberculosis H37Rv] >gi|15... 31 3.1 ref|NP_741151.1| Putative nuclear protein, nematode specific [Ca... 31 3.2 ref|NP_585918.1| hypothetical protein [Encephalitozoon cuniculi]... 31 3.3 ref|XP_215590.1| Fibrinogen, A alpha polypeptide [Rattus norvegi... 31 3.3 emb|CAA60263.1| fibrinogen alpha subunit [Rattus norvegicus] 31 3.3 ref|NP_703445.1| hypothetical protein [Plasmodium falciparum 3D7... 31 3.7 ref|NP_102463.1| aromatic amino acid decarboxylase [Mesorhizobiu... 31 3.9 emb|CAC85649.1| gag-like protein [Yarrowia lipolytica] 31 4.1 ref|XP_316890.1| ENSANGP00000021430 [Anopheles gambiae] >gi|2129... 31 4.6 emb|CAB75433.2| unnamed protein product [Sugarcane yellow leaf v... 30 5.0 pir||JC7537 beta-N-acetylglucosaminidase - Alteromonas sp. (stra... 30 5.0 dbj|BAB17855.1| GlcNAcase A [Alteromonas sp. O-7] 30 5.1 ref|XP_314549.1| ENSANGP00000016267 [Anopheles gambiae] >gi|3017... 30 5.5 ref|NP_841818.1| hypothetical protein [Nitrosomonas europaea ATC... 30 5.6 gb|EAA22377.1| kinesin-related protein [Plasmodium yoelii yoelii] 30 5.7 pir||T22235 hypothetical protein F45G2.3 - Caenorhabditis elegans 30 5.7 ref|NP_505948.1| Rap ran-GAP [Caenorhabditis elegans] >gi|750859... 30 5.9 gb|AAK48833.1| polycystin 1 [Mus musculus] 30 5.9 ref|NP_038658.1| polycystic kidney disease 1 homolog; polycystin... 30 5.9 pir||A89221 protein T27F2.2 [imported] - Caenorhabditis elegans 30 6.0 ref|NP_543167.1| Fas death domain-associated protein [Rattus nor... 30 6.3 ref|XP_197734.2| hypothetical protein XP_197734 [Mus musculus] 30 6.8 ref|NP_242889.1| BH2023~unknown [Bacillus halodurans] >gi|254901... 30 6.8 ref|NP_385652.1| PROBABLE TRIGGER FACTOR PROTEIN [Sinorhizobium ... 29 8.4 ref|NP_056171.1| scribble [Homo sapiens] >gi|18032008|gb|AAL3897... 29 9.2 dbj|BAA09768.3| KIAA0147 protein [Homo sapiens] 29 9.2 ref|NP_490236.1| unknown protein [Nostoc sp. PCC 7120] >gi|25530... 29 9.6 ref|NP_178854.1| plant transposase (Ptta/En/Spm) family [Arabido... 29 10.0 >ref|NP_173031.2| expressed protein [Arabidopsis thaliana] pir||C86292 F7H2.13 protein - Arabidopsis thaliana gb|AAF82149.1|AC034256_13 ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene. [Arabidopsis thaliana] gb|AAG48787.1|AF332424_1 unknown protein [Arabidopsis thaliana] Length = 179 Score = 221 bits (564), Expect = 1e-57 Identities = 148/148 (100%), Positives = 148/148 (100%) Query: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ Sbjct: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 Query: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS Sbjct: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 Query: 121 RQKNINALLDTLKKIVPHSGKEGIDELM 148 RQKNINALLDTLKKIVPHSGKEGIDELM Sbjct: 121 RQKNINALLDTLKKIVPHSGKEGIDELM 148 Score = 83.4 bits (205), Expect = 5e-16 Identities = 34/71 (47%), Positives = 47/71 (65%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ P SR + +N +++T K +P EG +EL +IAV EE +FN+A NQ +Y Sbjct: 109 TGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQEDY 168 Query: 64 LRQICMKMLNM 74 L +I +KM M Sbjct: 169 LGKISLKMRTM 179 >ref|NP_173030.1| expressed protein [Arabidopsis thaliana] Length = 1335 Score = 182 bits (462), Expect = 9e-46 Identities = 69/128 (53%), Positives = 82/128 (63%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQT+Y Sbjct: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 LR+I MKML METKSQNAAGSS+A S+P N+ + G T Q Q + Sbjct: 79 LRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPTNQGQLLPGSLSTNQSQAPQPL 138 Query: 124 NINALLDT 131 + + Sbjct: 139 LSQTMQNN 146 Score = 75.3 bits (184), Expect = 2e-13 Identities = 33/50 (66%), Positives = 42/50 (84%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL Sbjct: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINEL 57 >gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] Length = 1405 Score = 173 bits (440), Expect = 3e-43 Identities = 56/135 (41%), Positives = 77/135 (56%), Gaps = 6/135 (4%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ SR RIVNKIM+T + LPF +G NEL+KIA RFEEK++ AS+Q++Y Sbjct: 34 TGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDY 93 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN------NEPAVNTGDWRTQQP 117 LR+I +KML+ME+KSQNA +S +N P + N+ Q Sbjct: 94 LRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPGSMQNQVHNQGQSLPIPLSANQS 153 Query: 118 QDSRQKNINALLDTL 132 Q +Q + + + Sbjct: 154 QVRQQLLSQNIQNNM 168 Score = 70.3 bits (171), Expect = 4e-12 Identities = 25/50 (50%), Positives = 38/50 (76%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 P+ P E ++TGDWRTQ DSRQ+ +N ++DTLK+ +P SG++G++EL Sbjct: 23 PTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNEL 72 >pir||B86292 F7H2.12 protein - Arabidopsis thaliana gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene. [Arabidopsis thaliana] Length = 1366 Score = 167 bits (423), Expect = 3e-41 Identities = 69/159 (43%), Positives = 82/159 (51%), Gaps = 31/159 (19%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ--- 60 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQ Sbjct: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQRFV 78 Query: 61 ----------------------------TEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92 T+YLR+I MKML METKSQNAAGSS+A Sbjct: 79 RQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTMETKSQNAAGSSAAIPAAN 138 Query: 93 PLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDT 131 S+P N+ + G T Q Q + + + Sbjct: 139 NGTSIDSIPTNQGQLLPGSLSTNQSQAPQPLLSQTMQNN 177 Score = 75.7 bits (185), Expect = 1e-13 Identities = 33/50 (66%), Positives = 42/50 (84%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL Sbjct: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINEL 57 >gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] Length = 3148 Score = 149 bits (377), Expect = 6e-36 Identities = 52/105 (49%), Positives = 71/105 (67%), Gaps = 7/105 (6%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DWR SR RIVNKIM+T + LPF PEG NEL++IA RFEEK+F +A++Q++YLR Sbjct: 16 DWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQSDYLR 75 Query: 66 QICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 +I +KML+ME++SQNA+GS N PP P + ++T Sbjct: 76 KISLKMLSMESRSQNASGS-----NEPP--HPGIKPLTKEGLDTS 113 Score = 76.5 bits (187), Expect = 6e-14 Identities = 19/41 (46%), Positives = 29/41 (70%) Query: 107 VNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 ++ DWR DSRQ+ +N ++DTLK+ +P SG EG++EL Sbjct: 12 LDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNEL 52 >dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-group)] Length = 1359 Score = 140 bits (352), Expect = 5e-33 Identities = 51/93 (54%), Positives = 68/93 (72%) Query: 5 GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64 GDWR+Q S +R+RIVNKIM+T K LP PEG NEL+KIAVRFEEK++ A++Q++YL Sbjct: 35 GDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYL 94 Query: 65 RQICMKMLNMETKSQNAAGSSSADDNTPPLVPE 97 R+I +KML+METK+Q G++ N P E Sbjct: 95 RKISLKMLSMETKTQQNPGNAQVIQNQNPPGSE 127 Score = 72.6 bits (177), Expect = 9e-13 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 83 GSSSADDNTPPLVPEPSVPNN-EPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGK 141 G+ P PN PA+ GDWR+Q ++R + +N ++DTLKK +P S Sbjct: 7 GNWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVP 66 Query: 142 EGIDEL 147 EG++EL Sbjct: 67 EGLNEL 72 >pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) emb|CAA21993.1| possible regulatory protein [Candida albicans] Length = 1145 Score = 106 bits (266), Expect = 5e-23 Identities = 22/86 (25%), Positives = 40/86 (45%), Gaps = 2/86 (2%) Query: 7 WRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYLR 65 WR + R ++V I+ T +L P L K+A FE+ ++ ++++ +YLR Sbjct: 23 WRAMYSGEERQKVVQIIINTLT-ELHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLR 81 Query: 66 QICMKMLNMETKSQNAAGSSSADDNT 91 I MK+ + + Q A + N Sbjct: 82 AIKMKVHQLRVQKQQIAANQGGQINP 107 >dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)] Length = 414 Score = 104 bits (260), Expect = 2e-22 Identities = 19/64 (29%), Positives = 34/64 (52%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DWRT+ R R+ I+ + +L +L+K+A R EE+++ A + +YLR Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71 Query: 66 QICM 69 +I + Sbjct: 72 RISL 75 >ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] pir||E84491 hypothetical protein At2g10440 [imported] - Arabidopsis thaliana gb|AAD28655.1| hypothetical protein [Arabidopsis thaliana] Length = 935 Score = 74.9 bits (183), Expect = 2e-13 Identities = 16/56 (28%), Positives = 31/56 (54%), Gaps = 3/56 (5%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61 DWR+Q R ++++KI+E ++ N+ IA +FEE ++ A+++T Sbjct: 24 DWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---IASKFEENFYSIATDKT 76 >dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonica cultivar-group)] Length = 87 Score = 58.0 bits (139), Expect = 2e-08 Identities = 9/37 (24%), Positives = 17/37 (45%) Query: 24 METQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 M +L +L+K+A R EE+++ A + Sbjct: 39 MPILQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDF 75 >ref|NP_643335.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37871.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str. 306] Length = 534 Score = 41.0 bits (95), Expect = 0.003 Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 11/131 (8%) Query: 10 QFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM 69 + + +M+ + PE EL ++ +R + +++ Sbjct: 319 RHGLDHGQVVTEVLMDALT---HYSWPENLQELERVVLRLAVMTAGRPIGSAD-IQRHAP 374 Query: 70 KMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALL 129 ++L K ++ L EP+ P DW P Q+ L Sbjct: 375 RLLEGRVKGAQHDACATMSQ-PADLPAEPTPPGT-----PVDWIDGLPHRPGQRLA-TLH 427 Query: 130 DTLKKIVPHSG 140 D L++ + H G Sbjct: 428 DALRRALVHLG 438 >pir||T13828 CREB-binding protein homolog - fruit fly (Drosophila melanogaster) gb|AAB53050.1| CREB-binding protein homolog [Drosophila melanogaster] Length = 3190 Score = 39.1 bits (90), Expect = 0.012 Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 8/79 (10%) Query: 2 DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNN 56 D DWR + R+ +V+K+++ P P + L A + E+ ++ Sbjct: 938 DNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994 Query: 57 ASNQTEYLRQICMKMLNME 75 A +++EY + K+ ++ Sbjct: 995 AKSRSEYYHLLAEKIYKIQ 1013 >ref|NP_524642.2| nejire CG15319-PB [Drosophila melanogaster] gb|AAF46516.2| CG15319-PB [Drosophila melanogaster] Length = 3276 Score = 38.7 bits (89), Expect = 0.016 Identities = 16/79 (20%), Positives = 35/79 (44%), Gaps = 8/79 (10%) Query: 2 DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNN 56 D DWR + R+ +V+K+++ P P + L A + E+ ++ Sbjct: 938 DNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994 Query: 57 ASNQTEYLRQICMKMLNME 75 A +++EY + K+ ++ Sbjct: 995 AKSRSEYYHLLAEKIYKIQ 1013 >pir||S41033 hypothetical protein K03H1.10 - Caenorhabditis elegans (fragment) Length = 316 Score = 38.3 bits (88), Expect = 0.020 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 4/129 (3%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 T +W Q + R+ IV K+++ + +L A + E+++F A ++ Y Sbjct: 160 TKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYARKVEKEVFETAIDRKNY 219 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD--SR 121 + K+ ++ + Q S + E + + RT Q + + Sbjct: 220 YHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDEFARMRIDEG--GHQLRTNQETETNRQ 277 Query: 122 QKNINALLD 130 ++ L+D Sbjct: 278 NQSQQPLMD 286 >ref|NP_499201.1| TAZ zinc finger and KIX domain containing protein family member (36.7 kD) [Caenorhabditis elegans] pir||D88569 protein K03H1.10 [imported] - Caenorhabditis elegans emb|CAA82940.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans] emb|CAA82665.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans] Length = 322 Score = 38.3 bits (88), Expect = 0.022 Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 4/129 (3%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 T +W Q + R+ IV K+++ + +L A + E+++F A ++ Y Sbjct: 166 TKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYARKVEKEVFETAIDRKNY 225 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD--SR 121 + K+ ++ + Q S + E + + RT Q + + Sbjct: 226 YHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDEFARMRIDEG--GHQLRTNQETETNRQ 283 Query: 122 QKNINALLD 130 ++ L+D Sbjct: 284 NQSQQPLMD 292 >pir||S60123 hypothetical protein R10E11.1 - Caenorhabditis elegans Length = 2027 Score = 37.2 bits (85), Expect = 0.044 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 9/108 (8%) Query: 2 DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTN-----ELRKIAVRFEEKLFNN 56 D T +W Q R+ +V K++ P E N +L A + E+++F + Sbjct: 593 DCTKEWHHQVTKDLRNHLVGKLV---KAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFES 649 Query: 57 ASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104 A+++ EY + K+ ++ K +S + P+NE Sbjct: 650 ANDREEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 696 >ref|NP_499161.1| CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans] emb|CAA82353.2| C. elegans CBP-1 protein (corresponding sequence R10E11.1a) [Caenorhabditis elegans] Length = 2045 Score = 37.2 bits (85), Expect = 0.045 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 9/108 (8%) Query: 2 DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTN-----ELRKIAVRFEEKLFNN 56 D T +W Q R+ +V K++ P E N +L A + E+++F + Sbjct: 582 DCTKEWHHQVTKDLRNHLVGKLV---KAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFES 638 Query: 57 ASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104 A+++ EY + K+ ++ K +S + P+NE Sbjct: 639 ANDREEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 685 >ref|NP_499160.1| CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans] sp|P34545|CBP1_CAEEL Protein cbp-1 pir||G88564 protein R10E11.1 [imported] - Caenorhabditis elegans emb|CAD18875.1| C. elegans CBP-1 protein (corresponding sequence R10E11.1b) [Caenorhabditis elegans] Length = 2056 Score = 37.2 bits (85), Expect = 0.047 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 9/108 (8%) Query: 2 DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTN-----ELRKIAVRFEEKLFNN 56 D T +W Q R+ +V K++ P E N +L A + E+++F + Sbjct: 593 DCTKEWHHQVTKDLRNHLVGKLV---KAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFES 649 Query: 57 ASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104 A+++ EY + K+ ++ K +S + P+NE Sbjct: 650 ANDREEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 696 >ref|NP_586100.1| MADS domain [Encephalitozoon cuniculi] emb|CAD25704.1| MADS domain [Encephalitozoon cuniculi] Length = 776 Score = 36.0 bits (82), Expect = 0.11 Identities = 12/58 (20%), Positives = 25/58 (42%), Gaps = 5/58 (8%) Query: 10 QFPSASRSRIVNKIMETQLKQ--LPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 R +++ K+ + P P E A+R E++++ + ++ EYLR Sbjct: 1 MLSQEERKQMILKLFVALKESNIFPGYTPVQIKEA---AIRAEQRIYEESGSKEEYLR 55 >pir||FGRTA fibrinogen alpha chain precursor - rat Length = 550 Score = 35.7 bits (81), Expect = 0.13 Identities = 20/143 (13%), Positives = 52/143 (35%), Gaps = 6/143 (4%) Query: 10 QFPSASRSRI---VNKIMETQL--KQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64 Q R RI K++E + L + +++++ V + K+ + + + + Sbjct: 130 QVSEDLRRRIEILKRKVIEKAQQIQVLQXXXXDQLIDMKRLEVDIDIKIRSCKGSCSRSV 189 Query: 65 -RQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 R+I +K + K + + P + G +++Q + + Sbjct: 190 SREINLKDYEGQQKQLEQVIAKELLPAKDRQYLPAIKMSPVPDLVPGSFKSQLQEGPPEW 249 Query: 124 NINALLDTLKKIVPHSGKEGIDE 146 + ++ + GK+G+ E Sbjct: 250 KALTEMRQMRMELERPGKDGLRE 272 >gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [Homo sapiens] Length = 1553 Score = 34.9 bits (79), Expect = 0.24 Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 27/146 (18%) Query: 3 TTG---DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLF 54 TTG W R+ +V+K+++ P P + L A + E ++ Sbjct: 564 TTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMY 620 Query: 55 NNASNQTEYLRQICMKMLNM----------ETKSQNAAGSSSA----DDNTPP--LVPEP 98 +A+N+ EY + K+ + + QN +++ N P P+P Sbjct: 621 ESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQP 680 Query: 99 SVPNNEPAVNTGDWRTQQPQDSRQKN 124 + +N P + R P + Sbjct: 681 GMTSNGPLPDPSMIRGSVPNQMMPRI 706 >gb|AAL54859.1| CREB-binding protein [Aplysia californica] Length = 2245 Score = 34.5 bits (78), Expect = 0.28 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 12/110 (10%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASNQ 60 DW Q R+ +V+K+++ P + L A + E ++ +A+N+ Sbjct: 504 DWHAQVTQDLRNHLVHKLVQAI---FPTPDQATLRDSRMKNLVAYARKVEGDMYESANNR 560 Query: 61 TEYLRQICMKML----NMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPA 106 +Y + K+ +E K +A + P + PN + Sbjct: 561 GQYYHLLAEKIYKIQKELEEKRIQRMKVQNAPNAQVPGMQGQIHPNAQNG 610 >dbj|BAC45105.1| OJ1705_C03.27 [Oryza sativa (japonica cultivar-group)] Length = 194 Score = 34.1 bits (77), Expect = 0.38 Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 7/31 (22%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRP 36 DWRT+ R R+ + I L P Sbjct: 12 DWRTRLGQDIRDRVTHDI-------LQASTP 35 >ref|NP_001420.1| E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens] sp|Q09472|P300_HUMAN E1A-associated protein p300 pir||A54277 transcription adaptor protein p300 - human gb|AAA18639.1| p300 protein Length = 2414 Score = 34.1 bits (77), Expect = 0.40 Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 27/146 (18%) Query: 3 TTG---DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLF 54 TTG W R+ +V+K+++ P P + L A + E ++ Sbjct: 564 TTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMY 620 Query: 55 NNASNQTEYLRQICMKMLNM----------ETKSQNAAGSSSA----DDNTPP--LVPEP 98 +A+N+ EY + K+ + + QN +++ N P P+P Sbjct: 621 ESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQP 680 Query: 99 SVPNNEPAVNTGDWRTQQPQDSRQKN 124 + +N P + R P + Sbjct: 681 GMTSNGPLPDPSMIRGSVPNQMMPRI 706 >ref|ZP_00043576.1| hypothetical protein [Magnetococcus sp. MC-1] Length = 682 Score = 33.3 bits (75), Expect = 0.72 Identities = 16/65 (24%), Positives = 25/65 (37%), Gaps = 5/65 (7%) Query: 67 ICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNIN 126 I + L ++ NA + N V N+P+ N D R Q R + Sbjct: 275 IAYRALLKSVRNTNAKAGTVVVMNPNNGEILALV--NQPSYNPNDLRHSQDHQRRNR--- 329 Query: 127 ALLDT 131 A++DT Sbjct: 330 AIMDT 334 >ref|XP_240098.1| hypothetical protein XP_240098 [Rattus norvegicus] Length = 215 Score = 33.0 bits (74), Expect = 0.74 Identities = 10/65 (15%), Positives = 22/65 (33%) Query: 71 MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLD 130 + ++ ++ + +N P P PNN+ R+ + L D Sbjct: 45 VHLLQDSTKLLTPQTFCSENCLPSTHPPQGPNNQGFAFGASLRSSEVWAPDILVRQPLSD 104 Query: 131 TLKKI 135 T ++ Sbjct: 105 TTRRH 109 >ref|NP_524209.2| Chitin synthase 2 CG7464-PA [Drosophila melanogaster] gb|AAF51798.2| CG7464-PA [Drosophila melanogaster] Length = 1416 Score = 33.0 bits (74), Expect = 0.77 Identities = 19/109 (17%), Positives = 36/109 (32%), Gaps = 7/109 (6%) Query: 11 FPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLF--NNASNQTEYLRQIC 68 R +V + +T + L R + ++ + FE + F + + + L + Sbjct: 1297 LEGEHRESMVRR--QTIFR-LHETRDKQHSDYSNLVFNFERRFFGDDELNLKNLALNRKS 1353 Query: 69 MKMLNME--TKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQ 115 +K+L NAA + P VP + T R Sbjct: 1354 VKLLQERRSAAKVNAAATPEGTPTPKAGKRPPVVPMAKKVSFTASNRNN 1402 >ref|NP_217566.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] ref|NP_337653.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] ref|NP_856721.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] pir||E70861 hypothetical protein Rv3050c - Mycobacterium tuberculosis (strain H37RV) emb|CAA16135.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] gb|AAK47467.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] emb|CAD96763.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] Length = 246 Score = 33.0 bits (74), Expect = 0.86 Identities = 13/70 (18%), Positives = 38/70 (53%), Gaps = 1/70 (1%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYL 64 D R++ R ++ N+I++ + + + PE ++ + A + K++ + +++++ L Sbjct: 18 DARSERWREHRKKVRNEIVDAAFRAIDRLGPELSVRQIAEEAGTAKPKIYRHFTDKSDLL 77 Query: 65 RQICMKMLNM 74 I M++ +M Sbjct: 78 EAIGMRLRDM 87 >ref|NP_774610.1| oxidoreductase [Bradyrhizobium japonicum] dbj|BAC53235.1| oxidoreductase [Bradyrhizobium japonicum USDA 110] Length = 470 Score = 32.6 bits (73), Expect = 1.00 Identities = 15/55 (27%), Positives = 21/55 (37%), Gaps = 8/55 (14%) Query: 101 PNNEPAVNTGDWRTQQPQDSR--------QKNINALLDTLKKIVPHSGKEGIDEL 147 + PA N DW PQ R Q +A+L K +P + G+ L Sbjct: 29 GTDVPARNCNDWSASLPQTPRAVIRPLDAQGVTDAILTCRKAHLPFVPQGGLTGL 83 >ref|NP_505434.1| Heavy chain, Unconventional Myosin HUM-2 (hum-2) [Caenorhabditis elegans] Length = 1833 Score = 32.6 bits (73), Expect = 1.2 Identities = 18/87 (20%), Positives = 38/87 (42%), Gaps = 3/87 (3%) Query: 53 LFNNASNQTEYLR--QICMK-MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNT 109 +F + E LR + ++ ML+ + Q+ AGSS + P S ++E + Sbjct: 1259 VFERIMEENERLREEAVELRSMLSSHFEKQSVAGSSGYRRSPRPDSGHCSGADSEDGSSG 1318 Query: 110 GDWRTQQPQDSRQKNINALLDTLKKIV 136 D + + +++ L + L K++ Sbjct: 1319 ADLEEDLCIERQCRHLKNLAENLTKML 1345 >ref|NP_505433.1| Heavy chain, Unconventional Myosin HUM-2 (209.9 kD) (hum-2) [Caenorhabditis elegans] Length = 1835 Score = 32.6 bits (73), Expect = 1.2 Identities = 18/87 (20%), Positives = 38/87 (42%), Gaps = 3/87 (3%) Query: 53 LFNNASNQTEYLR--QICMK-MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNT 109 +F + E LR + ++ ML+ + Q+ AGSS + P S ++E + Sbjct: 1261 VFERIMEENERLREEAVELRSMLSSHFEKQSVAGSSGYRRSPRPDSGHCSGADSEDGSSG 1320 Query: 110 GDWRTQQPQDSRQKNINALLDTLKKIV 136 D + + +++ L + L K++ Sbjct: 1321 ADLEEDLCIERQCRHLKNLAENLTKML 1347 >gb|AAA97926.1| hum-2 [Caenorhabditis elegans] Length = 1839 Score = 32.6 bits (73), Expect = 1.2 Identities = 18/87 (20%), Positives = 38/87 (42%), Gaps = 3/87 (3%) Query: 53 LFNNASNQTEYLR--QICMK-MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNT 109 +F + E LR + ++ ML+ + Q+ AGSS + P S ++E + Sbjct: 1265 VFERIMEENERLREEAVELRSMLSSHFEKQSVAGSSGYRRSPRPDSGHCSGADSEDGSSG 1324 Query: 110 GDWRTQQPQDSRQKNINALLDTLKKIV 136 D + + +++ L + L K++ Sbjct: 1325 ADLEEDLCIERQCRHLKNLAENLTKML 1351 >ref|ZP_00120204.1| hypothetical protein [Cytophaga hutchinsonii] Length = 568 Score = 32.6 bits (73), Expect = 1.2 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 15/121 (12%) Query: 19 IVNKIMETQLKQLPFIRPEGTNELRKI---AVRFEEKLFNNASNQTEYLRQICMKMLNME 75 I N+I+ Q + E N+++KI R EE + + L +I +K ++ Sbjct: 435 IENQILTKQKE-------EALNDIQKIQKEKDRIEEDKYKVEVEKETALTEIEIKNTELK 487 Query: 76 TKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSR-QKNINALLDTLKK 134 KS+ NT ++ + + + R + D R + LK Sbjct: 488 VKSEELI----VLKNTHAILELKQQLEYKQQLLSITERNIESYDKRHPPIAAIIEKKLKN 543 Query: 135 I 135 Sbjct: 544 H 544 >ref|NP_044842.1| unknown [murid herpesvirus 4] emb|CAA72393.1| ORF2 [Murid herpesvirus 4] gb|AAB66427.1| unknown [murid herpesvirus 4] gb|AAF19270.1|AF105037_2 M2 [murid herpesvirus 4] Length = 199 Score = 32.6 bits (73), Expect = 1.2 Identities = 29/104 (27%), Positives = 45/104 (42%), Gaps = 16/104 (15%) Query: 8 RTQFPSASRSRIVNKIMETQL-----KQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62 RT+FP R R NK+ T + P PE N A EE ++ A+++ Sbjct: 81 RTRFPKTIR-RGFNKLRSTLKSPWKPRPSPVPSPEEVNP----AGSPEENIYETANSEPV 135 Query: 63 YLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPE-PSVPNNEP 105 Y++ I + L M +GS+ + +N P P +PN P Sbjct: 136 YIQPISTRSLMMLD-----SGSTDSPENLGPPTRPLPKLPNQHP 174 >pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thaliana gb|AAC17068.1| Similar to CREB-binding protein homolog gb|U88570 from D. melanogaster and contains similarity to callus-associated protein gb|U01961 from Nicotiana tabacum. EST gb|W43427 comes from this gene. [Arabidopsis thaliana] Length = 1516 Score = 32.2 bits (72), Expect = 1.2 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 11/99 (11%) Query: 15 SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLRQ------- 66 R + +I ++ P E + + +A R EE LF A+ + +Y+ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 67 ---ICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN 102 I + LN + + S TP L PN Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNPN 149 >sp|P06399|FIBA_RAT Fibrinogen alpha/alpha-E chain precursor [Contains: Fibrinopeptide A] emb|CAA60264.1| fibrinogen alpha-E subunit [Rattus norvegicus] Length = 782 Score = 32.2 bits (72), Expect = 1.3 Identities = 19/140 (13%), Positives = 50/140 (35%), Gaps = 6/140 (4%) Query: 10 QFPSASRSRI---VNKIMETQL--KQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64 Q R RI K++E + L + +++++ V + K+ + + + + Sbjct: 130 QVSEDLRRRIQILKRKVIEKAQQIQVLQKDVRDQLIDMKRLEVDIDIKIRSCKGSCSRSV 189 Query: 65 -RQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 R+I +K + K + + P + G +++Q + + Sbjct: 190 SREINLKDYEGQQKQLEQVIAKDLLPAKDRQYLPAIKMSPVPDLVPGSFKSQLQEGPPEW 249 Query: 124 NINALLDTLKKIVPHSGKEG 143 + ++ + GK+G Sbjct: 250 KALTEMRQMRMELERPGKDG 269 >ref|NP_013060.1| vacuolar Protein Sorting; Vps13p [Saccharomyces cerevisiae] sp|Q07878|VP13_YEAST Vacuolar protein sorting-associated protein VPS13 pir||S64791 VPS13 protein - yeast (Saccharomyces cerevisiae) emb|CAA97491.1| ORF YLL040c [Saccharomyces cerevisiae] gb|AAC08284.1| Soi1p [Saccharomyces cerevisiae] Length = 3144 Score = 32.2 bits (72), Expect = 1.3 Identities = 21/96 (21%), Positives = 38/96 (38%), Gaps = 6/96 (6%) Query: 44 KIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNN 103 K+ FE + NQ YL +I K+ + + +G S P+P+ ++ Sbjct: 1313 KVTSNFESFALDLTENQLTYLLEISNKVSSAFNITDENSGESGGKGEIKSPSPDPASLSS 1372 Query: 104 EPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHS 139 E RT PQ + N + + + +K + S Sbjct: 1373 ESE------RTATPQSLQGSNKSNIKNPEQKYLDFS 1402 >gb|AAO12436.1| Heavy chain, unconventional myosin protein 2, isoform b [Caenorhabditis elegans] Length = 1664 Score = 32.2 bits (72), Expect = 1.4 Identities = 18/87 (20%), Positives = 38/87 (42%), Gaps = 3/87 (3%) Query: 53 LFNNASNQTEYLR--QICMK-MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNT 109 +F + E LR + ++ ML+ + Q+ AGSS + P S ++E + Sbjct: 1090 VFERIMEENERLREEAVELRSMLSSHFEKQSVAGSSGYRRSPRPDSGHCSGADSEDGSSG 1149 Query: 110 GDWRTQQPQDSRQKNINALLDTLKKIV 136 D + + +++ L + L K++ Sbjct: 1150 ADLEEDLCIERQCRHLKNLAENLTKML 1176 >gb|AAO12435.1| Heavy chain, unconventional myosin protein 2, isoform a [Caenorhabditis elegans] Length = 1662 Score = 32.2 bits (72), Expect = 1.4 Identities = 18/87 (20%), Positives = 38/87 (42%), Gaps = 3/87 (3%) Query: 53 LFNNASNQTEYLR--QICMK-MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNT 109 +F + E LR + ++ ML+ + Q+ AGSS + P S ++E + Sbjct: 1088 VFERIMEENERLREEAVELRSMLSSHFEKQSVAGSSGYRRSPRPDSGHCSGADSEDGSSG 1147 Query: 110 GDWRTQQPQDSRQKNINALLDTLKKIV 136 D + + +++ L + L K++ Sbjct: 1148 ADLEEDLCIERQCRHLKNLAENLTKML 1174 >ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thaliana] dbj|BAB02507.1| CREB-binding protein-like [Arabidopsis thaliana] Length = 1670 Score = 32.2 bits (72), Expect = 1.4 Identities = 14/91 (15%), Positives = 38/91 (41%), Gaps = 7/91 (7%) Query: 15 SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR------QI 67 R ++N+ ++ P + + +L ++A R E ++ A+++ +YL ++ Sbjct: 43 LRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFRSFDVRV 102 Query: 68 CMKMLNMETKSQNAAGSSSADDNTPPLVPEP 98 + + ++ + SS + P V Sbjct: 103 ESTLKQLLSQRRANPSSSVSTMVQTPGVSHG 133 >ref|NP_173115.1| expressed protein [Arabidopsis thaliana] Length = 1706 Score = 32.2 bits (72), Expect = 1.5 Identities = 12/67 (17%), Positives = 29/67 (42%), Gaps = 2/67 (2%) Query: 45 IAVRFEEKLFNNASNQTEYLRQICM--KMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN 102 +A R EE LF A + +Y+ + + ++ ++ Q + +++ P+ Sbjct: 104 VARRLEEGLFKMAVTKEDYMNRSTLESRITSLIKGRQINNYNQRHANSSSVGTMIPTPGL 163 Query: 103 NEPAVNT 109 ++ A N Sbjct: 164 SQTAGNP 170 >ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] gb|AAG60059.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] Length = 1654 Score = 32.2 bits (72), Expect = 1.6 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 11/99 (11%) Query: 15 SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLRQ------- 66 R + +I ++ P E + + +A R EE LF A+ + +Y+ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 67 ---ICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN 102 I + LN + + S TP L PN Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNPN 149 >ref|NP_341855.1| Conserved hypothetical protein [Sulfolobus solfataricus] pir||F90173 conserved hypothetical protein [imported] - Sulfolobus solfataricus gb|AAK40645.1| Conserved hypothetical protein [Sulfolobus solfataricus] Length = 275 Score = 32.2 bits (72), Expect = 1.6 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Query: 36 PEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM 69 P NELRK + FEE +F A +YL + M Sbjct: 170 PVNLNELRKYSHVFEE-IFKIAL--KDYLTAMKM 200 >ref|NP_250870.1| hypothetical protein [Pseudomonas aeruginosa PA01] pir||B83372 hypothetical protein PA2180 [imported] - Pseudomonas aeruginosa (strain PAO1) gb|AAG05568.1|AE004645_2 hypothetical protein [Pseudomonas aeruginosa PAO1] Length = 458 Score = 31.8 bits (71), Expect = 1.9 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 8/63 (12%) Query: 89 DNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKN-------INALLDTLKKIVPHSGK 141 P +P P EPA GD +Q R+ + LL+ + H G Sbjct: 379 QAPAPADRDPLAPLAEPATAGGDVDAEQVALRRELLRLSPEQGVARLLELMAPH-RHHGP 437 Query: 142 EGI 144 G+ Sbjct: 438 AGL 440 >gb|AAB59959.1| neural cell adhesion molecule Length = 1052 Score = 31.8 bits (71), Expect = 2.0 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 71 MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLD 130 + NM S+ AAG+ SA L P+ +EP ++ + + ++ + + + Sbjct: 893 VANMAETSKAAAGNKSAAPTPANLTSPPAP--SEPKQEVSSTKSPEKEAAQPSTVKSPTE 950 Query: 131 TLK 133 T K Sbjct: 951 TAK 953 >ref|XP_143369.1| similar to protocadherin 16 precursor; fibroblast cadherin FIB1; cadherin 19; fibroblast cadherin 1; dachsous homologue [Homo sapiens] [Mus musculus] Length = 754 Score = 31.8 bits (71), Expect = 2.0 Identities = 15/54 (27%), Positives = 23/54 (41%), Gaps = 4/54 (7%) Query: 69 MKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQ 122 +K +M + + A+GSS+ N V E P+ GD R P +Q Sbjct: 33 LKDSSMSREEEQASGSSAQVFNLSLSVDEGLPPDT----LVGDIRAGLPAAQQQ 82 >ref|ZP_00053646.1| hypothetical protein [Magnetospirillum magnetotacticum] Length = 484 Score = 31.8 bits (71), Expect = 2.1 Identities = 11/43 (25%), Positives = 19/43 (43%), Gaps = 2/43 (4%) Query: 6 DW-RTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAV 47 DW R Q R+V+ ++E ++ P+ L +IA Sbjct: 104 DWLRKQL-PEGEIRVVSGVVEHFNNEIQISHPDHIVRLEEIAQ 145 >gb|EAA19098.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 342 Score = 31.4 bits (70), Expect = 2.1 Identities = 12/56 (21%), Positives = 25/56 (44%) Query: 8 RTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 R F + R++ +N+ ++ + NE++K + + +F NA EY Sbjct: 77 RNLFSNDIRNKKINEFLQKKKNSCYLHINSNVNEIKKKRDKILKNVFLNAKLLQEY 132 >ref|NP_695693.1| DNA polymerase III subunit gamma/tau [Bifidobacterium longum NCC2705] gb|AAN24329.1|AE014670_6 DNA polymerase III subunit gamma/tau [Bifidobacterium longum NCC2705] Length = 970 Score = 31.4 bits (70), Expect = 2.1 Identities = 18/82 (21%), Positives = 26/82 (30%), Gaps = 14/82 (17%) Query: 75 ETKSQNA--AGSSSADD---NTPPLVPEPSVPNNEPAVN-------TGD--WRTQQPQDS 120 +T+SQ A S A+ N P P N+P N GD W Q Q Sbjct: 771 QTQSQAAVSPASQPAEADPWNQPYQQSPHDDPWNQPQGNHAQAAPQPGDDPWNQPQSQTP 830 Query: 121 RQKNINALLDTLKKIVPHSGKE 142 + + P + + Sbjct: 831 ASSVPQTVSGNMSGDDPWNQPQ 852 >ref|ZP_00121363.1| hypothetical protein [Bifidobacterium longum DJO10A] Length = 981 Score = 31.4 bits (70), Expect = 2.2 Identities = 18/82 (21%), Positives = 26/82 (30%), Gaps = 14/82 (17%) Query: 75 ETKSQNA--AGSSSADD---NTPPLVPEPSVPNNEPAVN-------TGD--WRTQQPQDS 120 +T+SQ A S A+ N P P N+P N GD W Q Q Sbjct: 782 QTQSQAAVSPASQPAEADPWNQPYQQSPHDDPWNQPQGNHAQAAPQPGDDPWNQPQSQTP 841 Query: 121 RQKNINALLDTLKKIVPHSGKE 142 + + P + + Sbjct: 842 ASSVPQTVSGNMSGDDPWNQPQ 863 >gb|AAA16565.1| SDC25 protein [Saccharomyces cerevisiae] Length = 1253 Score = 31.4 bits (70), Expect = 2.3 Identities = 21/124 (16%), Positives = 40/124 (31%), Gaps = 12/124 (9%) Query: 9 TQFPSASRSRIVNKIMETQLK-------QLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61 +Q RS ++ I+ T K P L ++ RF + FN S Sbjct: 314 SQKDPERRSPLLQSILGTFQKFHFLLRLLHFLSNPNELTILPQLTPRFFKDSFNTISWNN 373 Query: 62 EYLRQICMKMLNMETKSQ--NAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD 119 +LR + + ++M Q A +S + + + + + P Sbjct: 374 PFLRTVFNQHMSMTLPRQMIKAVAGASGIVAEN---IDEIPASKQGTFISSETSHHSPSA 430 Query: 120 SRQK 123 Q+ Sbjct: 431 PFQR 434 >ref|NP_657433.1| Glycos_transf_2, Glycosyl transferase [Bacillus anthracis A2012] ref|NP_845852.1| glycosyl transferase, group 2 family protein [Bacillus anthracis str. Ames] gb|AAP27338.1| glycosyl transferase, group 2 family protein [Bacillus anthracis str. Ames] Length = 851 Score = 31.4 bits (70), Expect = 2.3 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 5/57 (8%) Query: 62 EYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQ 118 +Y +QI +K +N+E K Q+ SS P V N P ++ Q Sbjct: 294 DYYQQIKLKKINLEKKKQHINNSSHL-----PKVSILIPAYNRPHYLELALKSALNQ 345 >ref|NP_499770.1| XPG N-terminal domain and XPG I-region (72.1 kD) [Caenorhabditis elegans] emb|CAB07612.2| Hypothetical protein F45G2.3 [Caenorhabditis elegans] Length = 639 Score = 31.4 bits (70), Expect = 2.3 Identities = 26/129 (20%), Positives = 40/129 (30%), Gaps = 10/129 (7%) Query: 12 PSASRSRIVNKIMETQLKQLPFIRPEGTNEL---RKIAVRFEEK----LFNNASNQTEYL 64 P R +I+ I + + E T E K+ EE + A + + Sbjct: 476 PPEKRQKILEVIDDDFSEFFQEKVKENTKESVAEEKVENSNEELKPPPILRKAVSTPDSA 535 Query: 65 RQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAV--NTGDWRTQQPQDSRQ 122 R+ K + QN+A S D S P +E V +R Q Sbjct: 536 RK-THKFQSPLLNHQNSAPPSLPDRKPAQTSKYFSKPTSENGVPKTKNPFRCPAFVKPTQ 594 Query: 123 KNINALLDT 131 K + T Sbjct: 595 KVEEKIEKT 603 >sp|P13590|NCA1_CHICK Neural cell adhesion molecule 1, 180 kDa isoform precursor (N-CAM 180) gb|AAB59958.1| neural cell adhesion molecule Length = 1091 Score = 31.4 bits (70), Expect = 2.3 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 71 MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLD 130 + NM S+ AAG+ SA L P+ +EP ++ + + ++ + + + Sbjct: 932 VANMAETSKAAAGNKSAAPTPANLTSPPAP--SEPKQEVSSTKSPEKEAAQPSTVKSPTE 989 Query: 131 TLK 133 T K Sbjct: 990 TAK 992 >pir||IJCHNL neural cell adhesion molecule long domain form precursor - chicken Length = 1091 Score = 31.4 bits (70), Expect = 2.3 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%) Query: 71 MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLD 130 + NM S+ AAG+ SA L P+ +EP ++ + + ++ + + + Sbjct: 932 VANMAETSKAAAGNKSAAPTPANLTSPPAP--SEPKQEVSSTKSPEKEAAQPSTVKSPTE 989 Query: 131 TLK 133 T K Sbjct: 990 TAK 992 >ref|NP_603126.1| Autolysin response regulator [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gb|AAL94425.1| Autolysin response regulator [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 240 Score = 31.4 bits (70), Expect = 2.4 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 13 SASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQ 66 S SR + + K + +L L+KI V +E+L+ + N +Y+ Sbjct: 105 SESRIKSLLKSLVNIKTELTSSVKNT--NLKKITVNIDERLYVISLNDIDYIEA 156 >pir||T29311 hypothetical protein F36D4.3 - Caenorhabditis elegans Length = 925 Score = 31.4 bits (70), Expect = 2.4 Identities = 18/87 (20%), Positives = 38/87 (42%), Gaps = 3/87 (3%) Query: 53 LFNNASNQTEYLR--QICMK-MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNT 109 +F + E LR + ++ ML+ + Q+ AGSS + P S ++E + Sbjct: 307 VFERIMEENERLREEAVELRSMLSSHFEKQSVAGSSGYRRSPRPDSGHCSGADSEDGSSG 366 Query: 110 GDWRTQQPQDSRQKNINALLDTLKKIV 136 D + + +++ L + L K++ Sbjct: 367 ADLEEDLCIERQCRHLKNLAENLTKML 393 >ref|NP_697911.1| trigger factor [Brucella suis 1330] gb|AAN29826.1|AE014393_1 trigger factor [Brucella suis 1330] Length = 485 Score = 31.4 bits (70), Expect = 2.4 Identities = 5/33 (15%), Positives = 15/33 (45%) Query: 9 TQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE 41 +Q+ +R ++ +I++ F P+ + Sbjct: 290 SQYGQVTRQKVKRQILDALDGDYQFETPQKLVD 322 >ref|NP_741152.1| Putative nuclear protein, nematode specific [Caenorhabditis elegans] sp|Q21955|YNL5_CAEEL Hypothetical protein R12B2.5 in chromosome III gb|AAA50743.3| Hypothetical protein R12B2.5a [Caenorhabditis elegans] Length = 780 Score = 31.4 bits (70), Expect = 2.5 Identities = 20/85 (23%), Positives = 34/85 (39%), Gaps = 4/85 (4%) Query: 46 AVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNT---PPLVPEPSVPN 102 A + EE +F ++ EY+R I + + S++AA S + PP + N Sbjct: 39 ARQVEEYVFAKCMSKDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTAALLGN 98 Query: 103 NEPAVNTGDWRTQQPQDSRQKNINA 127 G +R P D + + A Sbjct: 99 TPAGGTPG-YRAPVPPDPQPTSAQA 122 >pir||S14177 SCD25 protein (version 1) - yeast (Saccharomyces cerevisiae) Length = 1250 Score = 31.4 bits (70), Expect = 2.5 Identities = 21/124 (16%), Positives = 40/124 (31%), Gaps = 12/124 (9%) Query: 9 TQFPSASRSRIVNKIMETQLK-------QLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61 +Q RS ++ I+ T K P L ++ RF + FN S Sbjct: 314 SQKDPERRSPLLQSILGTFQKFHFLLRLLHFLSNPNELTILPQLTPRFFKDSFNTISWNN 373 Query: 62 EYLRQICMKMLNMETKSQ--NAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD 119 +LR + + ++M Q A +S + + + + + P Sbjct: 374 PFLRTVFNQHMSMTLPRQMIKAVAGASGIVAEN---IDEIPASKQGTFISSETSHHSPSA 430 Query: 120 SRQK 123 Q+ Sbjct: 431 PFQR 434 >ref|NP_050006.1| multifunctional protein [Sugarcane yellow leaf virus] gb|AAD45683.1|AF157029_2 multifunctional protein [sugarcane yellow leaf virus] Length = 650 Score = 31.4 bits (70), Expect = 2.6 Identities = 26/120 (21%), Positives = 42/120 (34%), Gaps = 18/120 (15%) Query: 12 PSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASN--------QTEY 63 S ++N I+ +++ +L IA R EEKL A N ++ Sbjct: 524 QDESTKELLNNIVSQLIQK---------IDLSSIATRVEEKLLRQAQNKQQQNGGKKSPR 574 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 R+ T ++ +S N P ++P N A N +Q Q R K Sbjct: 575 KRKTSNTSSKPHTNGKSPPVTSQGSGNAANS-PRYTIPQNRRAHNGESASSQSTQKWRPK 633 >ref|NP_536719.2| ankyrin repeat domain 6; diversin [Mus musculus] Length = 712 Score = 31.4 bits (70), Expect = 2.6 Identities = 23/106 (21%), Positives = 45/106 (41%), Gaps = 4/106 (3%) Query: 19 IVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM-KMLNMETK 77 +++K+M +++L R E N L++ A +++ + + L+ CM K+ ++E + Sbjct: 459 VLDKLM---VERLSAERTECMNRLQQHAAAEKQEGEKRQMSLVDELKAWCMLKIQSLELR 515 Query: 78 SQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 + + A PP P+V A G Q R K Sbjct: 516 LSGESRTFRAKSTPPPSDSTPAVDQPVVAAGPGAASDSSSQVVRPK 561 >gb|AAK15806.1| diversin [Mus musculus] Length = 712 Score = 31.4 bits (70), Expect = 2.7 Identities = 23/106 (21%), Positives = 45/106 (41%), Gaps = 4/106 (3%) Query: 19 IVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM-KMLNMETK 77 +++K+M +++L R E N L++ A +++ + + L+ CM K+ ++E + Sbjct: 459 VLDKLM---VERLSAERTECMNRLQQHAAAEKQEGEKRQMSLVDELKAWCMLKIQSLELR 515 Query: 78 SQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 + + A PP P+V A G Q R K Sbjct: 516 LSGESRTFRAKSTPPPSDSTPAVDQPVVAAGPGAASDSSSQVVRPK 561 >sp|Q8YGT8|TIG_BRUME Trigger factor (TF) Length = 477 Score = 31.0 bits (69), Expect = 2.8 Identities = 5/33 (15%), Positives = 15/33 (45%) Query: 9 TQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE 41 +Q+ +R ++ +I++ F P+ + Sbjct: 282 SQYGQITRQKVKRQILDALDGDYQFETPQKLVD 314 >gb|AAP21786.1| multifunctional protein [Sugarcane yellow leaf virus] Length = 650 Score = 31.0 bits (69), Expect = 2.8 Identities = 26/120 (21%), Positives = 42/120 (34%), Gaps = 18/120 (15%) Query: 12 PSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASN--------QTEY 63 S ++N I+ +++ +L IA R EEKL A N ++ Sbjct: 524 QDESTKELLNNIVSQLIQK---------IDLSSIATRVEEKLLRQAQNKQQQNGGKKSPR 574 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 R+ T ++ +S N P ++P N A N +Q Q R K Sbjct: 575 KRKTSNTSSKPHTNGKSPPVTSQGSGNAANS-PRYTIPQNRRAHNGESASSQSTQKWRPK 633 >ref|NP_440126.1| hybrid sensory kinase [Synechocystis sp. PCC 6803] pir||S74654 sensory transduction histidine kinase sll1672 - Synechocystis sp. (strain PCC 6803) dbj|BAA16806.1| hybrid sensory kinase [Synechocystis sp. PCC 6803] Length = 834 Score = 31.0 bits (69), Expect = 2.9 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFE-EKL 53 DW TQ ++M + ++P E L K+ RFE EK+ Sbjct: 779 DWLTQLSHYLLEADTEQVM-KLIAEIPASESELEQNLTKLVRRFEFEKI 826 >ref|NP_539986.1| TRIGGER FACTOR, PPIASE [Brucella melitensis] pir||AG3385 peptidylprolyl isomerase (EC 5.2.1.8) [imported] - Brucella melitensis (strain 16M) gb|AAL52250.1| TRIGGER FACTOR, PPIASE [Brucella melitensis 16M] Length = 485 Score = 31.0 bits (69), Expect = 2.9 Identities = 5/33 (15%), Positives = 15/33 (45%) Query: 9 TQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE 41 +Q+ +R ++ +I++ F P+ + Sbjct: 290 SQYGQITRQKVKRQILDALDGDYQFETPQKLVD 322 >pir||E89403 protein C06H5.4 [imported] - Caenorhabditis elegans Length = 337 Score = 31.0 bits (69), Expect = 2.9 Identities = 16/70 (22%), Positives = 27/70 (37%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DW+ R + V KI+ T P +EL + E ++ A N+ Y Sbjct: 177 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 236 Query: 66 QICMKMLNME 75 I + +M+ Sbjct: 237 GIESMIQSMQ 246 >gb|AAO12437.1| Heavy chain, unconventional myosin protein 2, isoform d [Caenorhabditis elegans] Length = 908 Score = 31.0 bits (69), Expect = 3.0 Identities = 18/87 (20%), Positives = 38/87 (42%), Gaps = 3/87 (3%) Query: 53 LFNNASNQTEYLR--QICMK-MLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNT 109 +F + E LR + ++ ML+ + Q+ AGSS + P S ++E + Sbjct: 334 VFERIMEENERLREEAVELRSMLSSHFEKQSVAGSSGYRRSPRPDSGHCSGADSEDGSSG 393 Query: 110 GDWRTQQPQDSRQKNINALLDTLKKIV 136 D + + +++ L + L K++ Sbjct: 394 ADLEEDLCIERQCRHLKNLAENLTKML 420 >ref|NP_507512.1| Predicted CDS, putative cytoplasmic protein, nematode specific [Caenorhabditis elegans] pir||T20398 hypothetical protein E01B7.2 - Caenorhabditis elegans emb|CAB54214.1| Hypothetical protein E01B7.2 [Caenorhabditis elegans] Length = 230 Score = 31.0 bits (69), Expect = 3.0 Identities = 16/70 (22%), Positives = 27/70 (37%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DW+ R + V KI+ T P +EL + E ++ A N+ Y Sbjct: 56 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 115 Query: 66 QICMKMLNME 75 I + +M+ Sbjct: 116 GIESMIQSMQ 125 >ref|NP_216714.1| mmpS3 [Mycobacterium tuberculosis H37Rv] ref|NP_336726.1| hypothetical protein [Mycobacterium tuberculosis CDC1551] ref|NP_855870.1| PROBABLE CONSERVED MEMBRANE PROTEIN MMPS3 [Mycobacterium bovis subsp. bovis AF2122/97] sp|Q10390|MMS3_MYCTU Putative membrane protein MMPS3 pir||G70784 probable mmpS3 protein - Mycobacterium tuberculosis (strain H37RV) emb|CAA94267.1| mmpS3 [Mycobacterium tuberculosis H37Rv] gb|AAK46540.1| hypothetical protein [Mycobacterium tuberculosis CDC1551] emb|CAD97074.1| PROBABLE CONSERVED MEMBRANE PROTEIN MMPS3 [Mycobacterium bovis subsp. bovis AF2122/97] Length = 299 Score = 31.0 bits (69), Expect = 3.1 Identities = 10/30 (33%), Positives = 12/30 (39%) Query: 91 TPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 P EP P +EP +TGD R Sbjct: 4 PNPPGREPDEPESEPVSDTGDERASGNHLP 33 >ref|NP_741151.1| Putative nuclear protein, nematode specific [Caenorhabditis elegans] gb|AAM54164.1|U00066_6 Hypothetical protein R12B2.5b [Caenorhabditis elegans] Length = 777 Score = 31.0 bits (69), Expect = 3.2 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 1/82 (1%) Query: 46 AVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEP 105 A + EE +F ++ EY+R I + + S++AA S + P + N Sbjct: 39 ARQVEEYVFAKCMSKDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTAGNTPA 98 Query: 106 AVNTGDWRTQQPQDSRQKNINA 127 G +R P D + + A Sbjct: 99 GGTPG-YRAPVPPDPQPTSAQA 119 >ref|NP_585918.1| hypothetical protein [Encephalitozoon cuniculi] emb|CAD25522.1| hypothetical protein [Encephalitozoon cuniculi] Length = 607 Score = 31.0 bits (69), Expect = 3.3 Identities = 15/48 (31%), Positives = 26/48 (53%), Gaps = 1/48 (2%) Query: 31 LPFIRPEGTNELRKIAVRFEEKLFNNASNQT-EYLRQICMKMLNMETK 77 L EGTNE+ K RFE+ S++ E +R+ +++ +ET+ Sbjct: 15 LHGSNVEGTNEVEKTRKRFEKAFSCKLSDEEVEIIRKSLVEVSGLETR 62 >ref|XP_215590.1| Fibrinogen, A alpha polypeptide [Rattus norvegicus] ref|XP_216914.1| similar to fibrinogen alpha subunit [Rattus norvegicus] Length = 440 Score = 31.0 bits (69), Expect = 3.3 Identities = 19/140 (13%), Positives = 50/140 (35%), Gaps = 6/140 (4%) Query: 10 QFPSASRSRI---VNKIMETQL--KQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64 Q R RI K++E + L + +++++ V + K+ + + + + Sbjct: 20 QVSEDLRRRIEILKRKVIEKAQQIQVLQKDVRDQLIDMKRLEVDIDIKIRSCKGSCSRSV 79 Query: 65 -RQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 R+I +K + K + + P + G +++Q + + Sbjct: 80 SREINLKDYEGQQKQLEQVIAKELLPAKDRQYLPAIKMSPVPDLVPGSFKSQLQEGPPEW 139 Query: 124 NINALLDTLKKIVPHSGKEG 143 + ++ + GK+G Sbjct: 140 KALTEMRQMRMELERPGKDG 159 >emb|CAA60263.1| fibrinogen alpha subunit [Rattus norvegicus] Length = 550 Score = 31.0 bits (69), Expect = 3.3 Identities = 19/140 (13%), Positives = 50/140 (35%), Gaps = 6/140 (4%) Query: 10 QFPSASRSRI---VNKIMETQL--KQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64 Q R RI K++E + L + +++++ V + K+ + + + + Sbjct: 130 QVSEDLRRRIQILKRKVIEKAQQIQVLQKDVRDQLIDMKRLEVDIDIKIRSCKGSCSRSV 189 Query: 65 -RQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 R+I +K + K + + P + G +++Q + + Sbjct: 190 SREINLKDYEGQQKQLEQVIAKDLLPAKDRQYLPAIKMSPVPDLVPGSFKSQLQEGPPEW 249 Query: 124 NINALLDTLKKIVPHSGKEG 143 + ++ + GK+G Sbjct: 250 KALTEMRQMRMELERPGKDG 269 >ref|NP_703445.1| hypothetical protein [Plasmodium falciparum 3D7] emb|CAD51465.1| hypothetical protein [Plasmodium falciparum 3D7] Length = 782 Score = 30.6 bits (68), Expect = 3.7 Identities = 11/58 (18%), Positives = 21/58 (35%), Gaps = 7/58 (12%) Query: 17 SRIVNKIMETQLKQLPFIRPEGTNE-------LRKIAVRFEEKLFNNASNQTEYLRQI 67 I+NK F + ++K + E+K++ + EY R+I Sbjct: 606 DNIINKYKNVLADHYYFKESNELIKYVSLFLWIQKKISKNEKKIYQIKMIKVEYNRKI 663 >ref|NP_102463.1| aromatic amino acid decarboxylase [Mesorhizobium loti] dbj|BAB48249.1| aromatic amino acid decarboxylase [Mesorhizobium loti] Length = 470 Score = 30.6 bits (68), Expect = 3.9 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 6 DWRTQFPSASRSRIVNKIME--TQLKQLPFIRPEGTNELRKIAVRFEEKL 53 DW + ++ R R V ++E + + PE + +I FEEK+ Sbjct: 15 DWGADYRNSLRERPVRPLVEPGDIFRSIDASPPEDAEPMDRIFADFEEKI 64 >emb|CAC85649.1| gag-like protein [Yarrowia lipolytica] Length = 728 Score = 30.6 bits (68), Expect = 4.1 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Query: 63 YLRQICMKMLNMET-KSQNAAGSSSADDNTPPL 94 Y R K MET ++Q +AG+S N PP Sbjct: 4 YNRARPEKTFTMETAQAQASAGNSLGAPNPPPP 36 >ref|XP_316890.1| ENSANGP00000021430 [Anopheles gambiae] gb|EAA12049.1| ENSANGP00000021430 [Anopheles gambiae str. PEST] Length = 1146 Score = 30.6 bits (68), Expect = 4.6 Identities = 13/43 (30%), Positives = 22/43 (50%) Query: 40 NELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAA 82 E R +AV +++ A+N ++LR I M E +S A+ Sbjct: 297 IETRLVAVAIQKRSHEYAANFEDFLRIIDMTQTVEELQSIRAS 339 >emb|CAB75433.2| unnamed protein product [Sugarcane yellow leaf virus] Length = 650 Score = 30.3 bits (67), Expect = 5.0 Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 22/121 (18%) Query: 12 PSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKM 71 S ++N I+ +++ +L IA R EEKL A N+ +Q K Sbjct: 524 QDESTKELLNNIVSQLIQK---------IDLSSIATRVEEKLLRQAQNKQ---QQNGGKK 571 Query: 72 LNMETKSQNAAGSSSADDNTPPLVPEPS----------VPNNEPAVNTGDWRTQQPQDSR 121 + K+ N + + +PP + S +P N A N +Q Q R Sbjct: 572 SPRKRKTSNTSSKPHINGKSPPXTSQGSGNAXNSPRYTIPQNRRAHNGESASSQXTQKWR 631 Query: 122 Q 122 Sbjct: 632 P 632 >pir||JC7537 beta-N-acetylglucosaminidase - Alteromonas sp. (strain O-7) Length = 863 Score = 30.3 bits (67), Expect = 5.0 Identities = 10/36 (27%), Positives = 18/36 (49%) Query: 35 RPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMK 70 P ++ A+RFE N + ++ + LR+I K Sbjct: 176 TPTDYTQIANAALRFERNQSNISVSKEDALRRINPK 211 >dbj|BAB17855.1| GlcNAcase A [Alteromonas sp. O-7] Length = 863 Score = 30.3 bits (67), Expect = 5.1 Identities = 10/36 (27%), Positives = 18/36 (49%) Query: 35 RPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMK 70 P ++ A+RFE N + ++ + LR+I K Sbjct: 176 TPTDYTQIANAALRFERNQSNISVSKEDALRRINPK 211 >ref|XP_314549.1| ENSANGP00000016267 [Anopheles gambiae] gb|EAA09973.2| ENSANGP00000016267 [Anopheles gambiae str. PEST] Length = 1722 Score = 30.3 bits (67), Expect = 5.5 Identities = 13/53 (24%), Positives = 24/53 (44%), Gaps = 3/53 (5%) Query: 17 SRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ---TEYLRQ 66 RI N+I+ T ++ I T + + R E K + ++Q + LR+ Sbjct: 1329 QRIYNRIVGTSQPKVHDINGMDTPDYSTVISRVEGKKKSITADQILSVDNLRK 1381 >ref|NP_841818.1| hypothetical protein [Nitrosomonas europaea ATCC 19718] emb|CAD85701.1| hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 373 Score = 30.3 bits (67), Expect = 5.6 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 7 WRTQFPSASRSRIVNKIMET---QLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 +R P A+ I +K + T LP G + + I F+E++F +S ++ Sbjct: 75 YRKYNPGAAVPNIEDKFIFTTLCLQHHLPIPATYGIFK-QGIVKTFDERIFQESSRFRDF 133 Query: 64 LRQI 67 +R++ Sbjct: 134 IREL 137 >gb|EAA22377.1| kinesin-related protein [Plasmodium yoelii yoelii] Length = 689 Score = 30.3 bits (67), Expect = 5.7 Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 11/115 (9%) Query: 18 RIVNKIMETQ-----LKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKML 72 R++N + + QL NE +KI + ++ + N+ ++ E+ + I Sbjct: 302 RVLNSSLSSLNKMLRKMQLTSSTLTMANECKKIKSKRKQLFYVNSESREEFFKNIK---- 357 Query: 73 NMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINA 127 E + S S N E NE + ++Q +I+ Sbjct: 358 -TEGNTHATTNSGSKKTNAKNETNE-MDETNENQFKGTKQNNAHSKSTQQIDIHN 410 >pir||T22235 hypothetical protein F45G2.3 - Caenorhabditis elegans Length = 1287 Score = 30.3 bits (67), Expect = 5.7 Identities = 26/129 (20%), Positives = 40/129 (30%), Gaps = 10/129 (7%) Query: 12 PSASRSRIVNKIMETQLKQLPFIRPEGTNEL---RKIAVRFEEK----LFNNASNQTEYL 64 P R +I+ I + + E T E K+ EE + A + + Sbjct: 1124 PPEKRQKILEVIDDDFSEFFQEKVKENTKESVAEEKVENSNEELKPPPILRKAVSTPDSA 1183 Query: 65 RQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAV--NTGDWRTQQPQDSRQ 122 R+ K + QN+A S D S P +E V +R Q Sbjct: 1184 RK-THKFQSPLLNHQNSAPPSLPDRKPAQTSKYFSKPTSENGVPKTKNPFRCPAFVKPTQ 1242 Query: 123 KNINALLDT 131 K + T Sbjct: 1243 KVEEKIEKT 1251 >ref|NP_505948.1| Rap ran-GAP [Caenorhabditis elegans] pir||T21738 hypothetical protein T27F2.2 - Caenorhabditis elegans emb|CAA98469.2| Hypothetical protein T27F2.2 [Caenorhabditis elegans] emb|CAA98554.2| Hypothetical protein T27F2.2 [Caenorhabditis elegans] Length = 924 Score = 30.3 bits (67), Expect = 5.9 Identities = 20/101 (19%), Positives = 38/101 (36%), Gaps = 18/101 (17%) Query: 46 AVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEP 105 A F+E+ F+ + + +E ++ N + +N P + SV +N Sbjct: 784 ASSFDERTFSFTATKK-----------TIEQRANNIS------NNRPNTLSSASVHDNMC 826 Query: 106 AVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDE 146 + + Q Q L+D L + P S +E +E Sbjct: 827 TLLNPPKYLNRAQSDEQLRS-PLMDELNRKAPLSARESTNE 866 >gb|AAK48833.1| polycystin 1 [Mus musculus] Length = 584 Score = 30.3 bits (67), Expect = 5.9 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 53 LFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAV 107 +F + Q + L Q + +E + Q+ G + P P ++PA+ Sbjct: 499 VFESLLVQFDRLNQATEDVYQLEQQLQSLRGH--GHNGPPSSPSPGCFPGSQPAL 551 >ref|NP_038658.1| polycystic kidney disease 1 homolog; polycystin-1 [Mus musculus] gb|AAC53207.1| polycystic kidney disease 1 protein [Mus musculus] Length = 4293 Score = 30.3 bits (67), Expect = 5.9 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 2/55 (3%) Query: 53 LFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAV 107 +F + Q + L Q + +E + Q+ G + P P ++PA+ Sbjct: 4208 VFESLLVQFDRLNQATEDVYQLEQQLQSLRGH--GHNGPPSSPSPGCFPGSQPAL 4260 >pir||A89221 protein T27F2.2 [imported] - Caenorhabditis elegans Length = 918 Score = 30.3 bits (67), Expect = 6.0 Identities = 20/101 (19%), Positives = 38/101 (36%), Gaps = 18/101 (17%) Query: 46 AVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEP 105 A F+E+ F+ + + +E ++ N + +N P + SV +N Sbjct: 778 ASSFDERTFSFTATKK-----------TIEQRANNIS------NNRPNTLSSASVHDNMC 820 Query: 106 AVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDE 146 + + Q Q L+D L + P S +E +E Sbjct: 821 TLLNPPKYLNRAQSDEQLRS-PLMDELNRKAPLSARESTNE 860 >ref|NP_543167.1| Fas death domain-associated protein [Rattus norvegicus] sp|Q8VIB2|DAXX_RAT Death domain-associated protein 6 (Daxx) dbj|BAB83524.1| Daxx [Rattus norvegicus] Length = 731 Score = 29.9 bits (66), Expect = 6.3 Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 2/88 (2%) Query: 41 ELRKIAVRFEEKLFNNASNQTEYLRQIC--MKMLNMETKSQNAAGSSSADDNTPPLVPEP 98 E R I R + N + Y+ ++C +K +++ K A +S+ P P Sbjct: 104 EFRNILSRVLSRSRNRPAKLYVYINELCTVLKAHSIKKKLNLAPAASAESSGDNPPTDPP 163 Query: 99 SVPNNEPAVNTGDWRTQQPQDSRQKNIN 126 S N + RT+ + Q+ Sbjct: 164 SDLTNTETTASEASRTRGSRRQIQRLEQ 191 >ref|XP_197734.2| hypothetical protein XP_197734 [Mus musculus] Length = 223 Score = 29.9 bits (66), Expect = 6.8 Identities = 16/78 (20%), Positives = 26/78 (32%), Gaps = 10/78 (12%) Query: 77 KSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQP--------QDSRQKNINAL 128 K G + P + P N + TQQ Q +Q ++++ Sbjct: 17 KQLQVKGRETDATVQRPPLHPPENSNTQGKSLIAPVNTQQSEGLPGDLLQKRQQ--VSSI 74 Query: 129 LDTLKKIVPHSGKEGIDE 146 LK + S EG+ E Sbjct: 75 AAHLKTLQSESLPEGLPE 92 >ref|NP_242889.1| BH2023~unknown [Bacillus halodurans] pir||G83902 hypothetical protein BH2023 [imported] - Bacillus halodurans (strain C-125) dbj|BAB05742.1| BH2023~unknown [Bacillus halodurans] Length = 921 Score = 29.9 bits (66), Expect = 6.8 Identities = 14/35 (40%), Positives = 16/35 (45%) Query: 17 SRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEE 51 SR V ++ ET L L F PE IA R E Sbjct: 384 SRAVREVDETILVALHFTNPETPGRYETIAQRLYE 418 >ref|NP_385652.1| PROBABLE TRIGGER FACTOR PROTEIN [Sinorhizobium meliloti] sp|Q92Q12|TIG_RHIME Trigger factor (TF) emb|CAC46125.1| PROBABLE TRIGGER FACTOR PROTEIN [Sinorhizobium meliloti] Length = 491 Score = 29.5 bits (65), Expect = 8.4 Identities = 10/55 (18%), Positives = 22/55 (39%), Gaps = 5/55 (9%) Query: 5 GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASN 59 G +QF S +R ++ ++++ + F PE + FE ++ Sbjct: 278 GQIESQFGSITRQKVKRQLLDQLDELYQFDTPERLVD-----AEFENIWRQINTD 327 >ref|NP_056171.1| scribble [Homo sapiens] gb|AAL38976.1| scribble [Homo sapiens] Length = 1630 Score = 29.5 bits (65), Expect = 9.2 Identities = 19/71 (26%), Positives = 28/71 (38%), Gaps = 9/71 (12%) Query: 78 SQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWR---TQQPQDS------RQKNINAL 128 SQ A ++ +++ EP+V E A+ GD R QP+ RQ+ I Sbjct: 547 SQQEATTAGGEEDAEEDYQEPTVHFAEDALLPGDDREIEEGQPEAPWTLPGGRQRLIRKD 606 Query: 129 LDTLKKIVPHS 139 KK S Sbjct: 607 TPHYKKHFKIS 617 >dbj|BAA09768.3| KIAA0147 protein [Homo sapiens] Length = 1630 Score = 29.5 bits (65), Expect = 9.2 Identities = 19/71 (26%), Positives = 28/71 (38%), Gaps = 9/71 (12%) Query: 78 SQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWR---TQQPQDS------RQKNINAL 128 SQ A ++ +++ EP+V E A+ GD R QP+ RQ+ I Sbjct: 547 SQQEATTAGGEEDAEEDYQEPTVHFAEDALLPGDDREIEEGQPEAPWTLPGGRQRLIRKD 606 Query: 129 LDTLKKIVPHS 139 KK S Sbjct: 607 TPHYKKHFKIS 617 >ref|NP_490236.1| unknown protein [Nostoc sp. PCC 7120] pir||AB2494 hypothetical protein all7130 [imported] - Nostoc sp. (strain PCC 7120) plasmid pCC7120alpha dbj|BAB78214.1| ORF_ID:all7130~unknown protein [Nostoc sp. PCC 7120] Length = 2297 Score = 29.5 bits (65), Expect = 9.6 Identities = 9/42 (21%), Positives = 19/42 (44%) Query: 17 SRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNAS 58 ++ ++ + T LP +P+ E+ KIA E + + Sbjct: 97 EKLRSEALITIAPHLPKSQPQWIQEVYKIAQNIENNYYQAKA 138 >ref|NP_178854.1| plant transposase (Ptta/En/Spm) family [Arabidopsis thaliana] pir||H84492 En/Spm transposon protein (mosaic-like protein) [imported] - Arabidopsis thaliana gb|AAD15362.1| En/Spm transposon protein (mosaic-like protein) [Arabidopsis thaliana] Length = 400 Score = 29.5 bits (65), Expect = 10.0 Identities = 17/108 (15%), Positives = 36/108 (32%), Gaps = 5/108 (4%) Query: 2 DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61 +T G Q P S + + + ++ +Q+ +IA R E + + Q Sbjct: 298 ETLGSANRQLPGDSTFKALEERLQKAQRQIEEHAAYNEKRDAEIAAR-EAETARVTTEQK 356 Query: 62 EYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNT 109 + L + + +E + A T +P P+ + Sbjct: 357 DKLEHLSL----VEKYLRQADPQFLDFIATHSSTSLERIPITPPSNDP 400 Searching..................................................done Results from round 5 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: ref|NP_173031.2| expressed protein [Arabidopsis thaliana] >gi|25... 219 6e-57 ref|NP_173030.1| expressed protein [Arabidopsis thaliana] 177 3e-44 gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 170 4e-42 pir||B86292 F7H2.12 protein - Arabidopsis thaliana >gi|8927657|g... 162 9e-40 ref|NP_643335.1| transcriptional regulator [Xanthomonas axonopod... 160 4e-39 gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 147 2e-35 dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-gro... 138 2e-32 pir||T18235 transcription activator GAL11 homolog - yeast (Candi... 106 9e-23 dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-g... 102 8e-22 ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] >gi... 75 3e-13 dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonica cultivar-g... 56 8e-08 Sequences not found previously or not previously below threshold: pir||T13828 CREB-binding protein homolog - fruit fly (Drosophila... 36 0.074 ref|NP_524642.2| nejire CG15319-PB [Drosophila melanogaster] >gi... 36 0.10 dbj|BAC45105.1| OJ1705_C03.27 [Oryza sativa (japonica cultivar-g... 36 0.14 pir||FGRTA fibrinogen alpha chain precursor - rat 35 0.17 dbj|BAB17855.1| GlcNAcase A [Alteromonas sp. O-7] 34 0.26 pir||JC7537 beta-N-acetylglucosaminidase - Alteromonas sp. (stra... 34 0.27 ref|NP_013208.1| RNA EXonuclease; member of 3'->5' exonuclease f... 34 0.35 ref|NP_266213.1| aromatic amino acid specific aminotransferase [... 34 0.40 ref|NP_586100.1| MADS domain [Encephalitozoon cuniculi] >gi|1906... 34 0.41 ref|NP_217566.1| hypothetical protein Rv3050c [Mycobacterium tub... 34 0.42 ref|XP_230743.1| similar to dJ310O13.5 (novel protein similar to... 34 0.51 ref|NP_719202.1| sigma-54 dependent transcriptional regulator/se... 34 0.55 sp|Q00664|NUDF_EMENI Nuclear migration protein nudF >gi|758430|g... 33 0.60 ref|ZP_00043576.1| hypothetical protein [Magnetococcus sp. MC-1] 33 0.77 gb|AAF06954.1|AF146529_1 aromatic amino acid aminotransferase [L... 33 0.84 ref|NP_522520.1| PROBABLE SIGMA-54 INTERACTING TRANSCRIPTION REG... 33 0.93 gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [Homo sapiens] 33 0.94 ref|NP_697911.1| trigger factor [Brucella suis 1330] >gi|2334771... 33 1.1 ref|NP_660201.1| calcium binding protein 4 [Homo sapiens] >gi|20... 33 1.1 sp|Q8YGT8|TIG_BRUME Trigger factor (TF) 33 1.2 ref|NP_173115.1| expressed protein [Arabidopsis thaliana] 33 1.2 ref|NP_539986.1| TRIGGER FACTOR, PPIASE [Brucella melitensis] >g... 33 1.2 gb|AAK52338.1| PrpR [Burkholderia sacchari] 33 1.3 ref|ZP_00006295.1| hypothetical protein [Rhodobacter sphaeroides] 32 1.6 ref|NP_242889.1| BH2023~unknown [Bacillus halodurans] >gi|254901... 32 1.7 ref|NP_662989.1| malonyl CoA-acyl carrier protein transacylase [... 32 1.7 ref|NP_524209.2| Chitin synthase 2 CG7464-PA [Drosophila melanog... 32 1.7 ref|NP_001420.1| E1A binding protein p300; E1A-binding protein, ... 32 1.8 ref|NP_302194.1| putative TetR-family transcriptional regulator ... 32 1.8 pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thali... 32 2.1 ref|NP_004371.1| CREB binding protein [Homo sapiens] >gi|3023440... 31 2.2 gb|AAC51331.2| CREB-binding protein [Homo sapiens] 31 2.2 ref|ZP_00105635.1| hypothetical protein [Prochlorococcus marinus... 31 2.4 ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [A... 31 2.5 ref|NP_345177.1| GTP-binding protein HflX [Streptococcus pneumon... 31 2.7 gb|AAL54859.1| CREB-binding protein [Aplysia californica] 31 2.8 ref|NP_485958.1| unknown protein [Nostoc sp. PCC 7120] >gi|25382... 31 3.2 ref|XP_215692.1| similar to myozenin-like 2; calsarcin-1 [Mus mu... 31 3.4 ref|NP_741151.1| Putative nuclear protein, nematode specific [Ca... 31 3.6 ref|NP_471700.1| similar to ATP-dependent deoxyribonuclease (sub... 31 3.8 ref|ZP_00120204.1| hypothetical protein [Cytophaga hutchinsonii] 31 4.1 ref|NP_067478.1| myozenin 2; myozenin-like 2; calsarcin-1 [Mus m... 31 4.2 ref|NP_507512.1| Predicted CDS, putative cytoplasmic protein, ne... 31 4.3 ref|NP_828837.1| conserved hypothetical protein [Streptomyces av... 31 4.3 ref|XP_240098.1| hypothetical protein XP_240098 [Rattus norvegicus] 31 4.3 ref|ZP_00109188.1| hypothetical protein [Nostoc punctiforme] 31 4.6 ref|ZP_00087815.1| hypothetical protein [Pseudomonas fluorescens... 30 5.1 pir||E89403 protein C06H5.4 [imported] - Caenorhabditis elegans 30 5.3 ref|NP_376184.1| 385aa long conserved hypothetical protein [Sulf... 30 6.0 emb|CAB71223.1| possible mucin 1 precursor [Leishmania major] 30 6.4 gb|AAC08447.1| CBP [Homo sapiens] 30 6.6 ref|NP_463594.1| highly similar to B. subtilis YukA protein [Lis... 30 7.1 ref|NP_216714.1| mmpS3 [Mycobacterium tuberculosis H37Rv] >gi|15... 30 7.3 ref|XP_143369.1| similar to protocadherin 16 precursor; fibrobla... 30 7.3 ref|NP_469401.1| highly similar to B. subtilis YukA protein [Lis... 30 7.6 ref|NP_543167.1| Fas death domain-associated protein [Rattus nor... 30 7.8 ref|NP_044842.1| unknown [murid herpesvirus 4] >gi|1888433|emb|C... 29 8.3 dbj|BAB21859.1| KIAA1768 protein [Homo sapiens] 29 8.8 ref|XP_113594.1| similar to KIAA1768 protein [Homo sapiens] 29 9.6 CONVERGED! >ref|NP_173031.2| expressed protein [Arabidopsis thaliana] pir||C86292 F7H2.13 protein - Arabidopsis thaliana gb|AAF82149.1|AC034256_13 ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene. [Arabidopsis thaliana] gb|AAG48787.1|AF332424_1 unknown protein [Arabidopsis thaliana] Length = 179 Score = 219 bits (558), Expect = 6e-57 Identities = 148/148 (100%), Positives = 148/148 (100%) Query: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ Sbjct: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 Query: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS Sbjct: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 Query: 121 RQKNINALLDTLKKIVPHSGKEGIDELM 148 RQKNINALLDTLKKIVPHSGKEGIDELM Sbjct: 121 RQKNINALLDTLKKIVPHSGKEGIDELM 148 Score = 85.3 bits (210), Expect = 2e-16 Identities = 34/71 (47%), Positives = 47/71 (65%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ P SR + +N +++T K +P EG +EL +IAV EE +FN+A NQ +Y Sbjct: 109 TGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQEDY 168 Query: 64 LRQICMKMLNM 74 L +I +KM M Sbjct: 169 LGKISLKMRTM 179 >ref|NP_173030.1| expressed protein [Arabidopsis thaliana] Length = 1335 Score = 177 bits (449), Expect = 3e-44 Identities = 69/128 (53%), Positives = 82/128 (63%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQT+Y Sbjct: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 LR+I MKML METKSQNAAGSS+A S+P N+ + G T Q Q + Sbjct: 79 LRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPTNQGQLLPGSLSTNQSQAPQPL 138 Query: 124 NINALLDT 131 + + Sbjct: 139 LSQTMQNN 146 Score = 74.1 bits (181), Expect = 3e-13 Identities = 33/50 (66%), Positives = 42/50 (84%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL Sbjct: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINEL 57 >gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] Length = 1405 Score = 170 bits (430), Expect = 4e-42 Identities = 56/135 (41%), Positives = 77/135 (56%), Gaps = 6/135 (4%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 TGDWRTQ SR RIVNKIM+T + LPF +G NEL+KIA RFEEK++ AS+Q++Y Sbjct: 34 TGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDY 93 Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN------NEPAVNTGDWRTQQP 117 LR+I +KML+ME+KSQNA +S +N P + N+ Q Sbjct: 94 LRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPGSMQNQVHNQGQSLPIPLSANQS 153 Query: 118 QDSRQKNINALLDTL 132 Q +Q + + + Sbjct: 154 QVRQQLLSQNIQNNM 168 Score = 72.2 bits (176), Expect = 1e-12 Identities = 25/50 (50%), Positives = 38/50 (76%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 P+ P E ++TGDWRTQ DSRQ+ +N ++DTLK+ +P SG++G++EL Sbjct: 23 PTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNEL 72 >pir||B86292 F7H2.12 protein - Arabidopsis thaliana gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene. [Arabidopsis thaliana] Length = 1366 Score = 162 bits (410), Expect = 9e-40 Identities = 69/159 (43%), Positives = 82/159 (51%), Gaps = 31/159 (19%) Query: 4 TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ--- 60 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQ Sbjct: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQRFV 78 Query: 61 ----------------------------TEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92 T+YLR+I MKML METKSQNAAGSS+A Sbjct: 79 RQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTMETKSQNAAGSSAAIPAAN 138 Query: 93 PLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDT 131 S+P N+ + G T Q Q + + + Sbjct: 139 NGTSIDSIPTNQGQLLPGSLSTNQSQAPQPLLSQTMQNN 177 Score = 74.5 bits (182), Expect = 2e-13 Identities = 33/50 (66%), Positives = 42/50 (84%) Query: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL Sbjct: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINEL 57 >ref|NP_643335.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str. 306] gb|AAM37871.1| transcriptional regulator [Xanthomonas axonopodis pv. citri str. 306] Length = 534 Score = 160 bits (405), Expect = 4e-39 Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 11/131 (8%) Query: 10 QFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM 69 + + +M+ + PE EL ++ +R + +++ Sbjct: 319 RHGLDHGQVVTEVLMDALT---HYSWPENLQELERVVLRLAVMTAGRPIGSAD-IQRHAP 374 Query: 70 KMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALL 129 ++L K ++ L EP+ P DW P Q+ L Sbjct: 375 RLLEGRVKGAQHDACATMSQ-PADLPAEPTPPGT-----PVDWIDGLPHRPGQRLA-TLH 427 Query: 130 DTLKKIVPHSG 140 D L++ + H G Sbjct: 428 DALRRALVHLG 438 >gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] Length = 3148 Score = 147 bits (372), Expect = 2e-35 Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 7/105 (6%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DWR SR RIVNKIM+T + LPF PEG NEL++IA RFEEK+F +A++Q++YLR Sbjct: 16 DWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQSDYLR 75 Query: 66 QICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 +I +KML+ME++SQNA+GS P + ++T Sbjct: 76 KISLKMLSMESRSQNASGS-------NEPPHPGIKPLTKEGLDTS 113 Score = 78.0 bits (191), Expect = 2e-14 Identities = 19/41 (46%), Positives = 29/41 (70%) Query: 107 VNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDEL 147 ++ DWR DSRQ+ +N ++DTLK+ +P SG EG++EL Sbjct: 12 LDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNEL 52 >dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-group)] Length = 1359 Score = 138 bits (347), Expect = 2e-32 Identities = 51/93 (54%), Positives = 68/93 (72%) Query: 5 GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64 GDWR+Q S +R+RIVNKIM+T K LP PEG NEL+KIAVRFEEK++ A++Q++YL Sbjct: 35 GDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYL 94 Query: 65 RQICMKMLNMETKSQNAAGSSSADDNTPPLVPE 97 R+I +KML+METK+Q G++ N P E Sbjct: 95 RKISLKMLSMETKTQQNPGNAQVIQNQNPPGSE 127 Score = 69.5 bits (169), Expect = 9e-12 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%) Query: 83 GSSSADDNTPPLVPEPSVPNN-EPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGK 141 G+ P PN PA+ GDWR+Q ++R + +N ++DTLKK +P S Sbjct: 7 GNWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVP 66 Query: 142 EGIDEL 147 EG++EL Sbjct: 67 EGLNEL 72 >pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) emb|CAA21993.1| possible regulatory protein [Candida albicans] Length = 1145 Score = 106 bits (264), Expect = 9e-23 Identities = 22/86 (25%), Positives = 40/86 (45%), Gaps = 2/86 (2%) Query: 7 WRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYLR 65 WR + R ++V I+ T +L P L K+A FE+ ++ ++++ +YLR Sbjct: 23 WRAMYSGEERQKVVQIIINTLT-ELHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLR 81 Query: 66 QICMKMLNMETKSQNAAGSSSADDNT 91 I MK+ + + Q A + N Sbjct: 82 AIKMKVHQLRVQKQQIAANQGGQINP 107 >dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)] Length = 414 Score = 102 bits (255), Expect = 8e-22 Identities = 19/64 (29%), Positives = 34/64 (52%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 DWRT+ R R+ I+ + +L +L+K+A R EE+++ A + +YLR Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71 Query: 66 QICM 69 +I + Sbjct: 72 RISL 75 >ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] pir||E84491 hypothetical protein At2g10440 [imported] - Arabidopsis thaliana gb|AAD28655.1| hypothetical protein [Arabidopsis thaliana] Length = 935 Score = 74.5 bits (182), Expect = 3e-13 Identities = 16/56 (28%), Positives = 31/56 (54%), Gaps = 3/56 (5%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61 DWR+Q R ++++KI+E ++ N+ IA +FEE ++ A+++T Sbjct: 24 DWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---IASKFEENFYSIATDKT 76 >dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonica cultivar-group)] Length = 87 Score = 56.4 bits (135), Expect = 8e-08 Identities = 9/37 (24%), Positives = 17/37 (45%) Query: 24 METQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 M +L +L+K+A R EE+++ A + Sbjct: 39 MPILQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDF 75 >pir||T13828 CREB-binding protein homolog - fruit fly (Drosophila melanogaster) gb|AAB53050.1| CREB-binding protein homolog [Drosophila melanogaster] Length = 3190 Score = 36.4 bits (83), Expect = 0.074 Identities = 16/75 (21%), Positives = 33/75 (43%), Gaps = 8/75 (10%) Query: 2 DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNN 56 D DWR + R+ +V+K+++ P P + L A + E+ ++ Sbjct: 938 DNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994 Query: 57 ASNQTEYLRQICMKM 71 A +++EY + K+ Sbjct: 995 AKSRSEYYHLLAEKI 1009 >ref|NP_524642.2| nejire CG15319-PB [Drosophila melanogaster] gb|AAF46516.2| CG15319-PB [Drosophila melanogaster] Length = 3276 Score = 36.0 bits (82), Expect = 0.10 Identities = 16/75 (21%), Positives = 33/75 (43%), Gaps = 8/75 (10%) Query: 2 DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNN 56 D DWR + R+ +V+K+++ P P + L A + E+ ++ Sbjct: 938 DNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994 Query: 57 ASNQTEYLRQICMKM 71 A +++EY + K+ Sbjct: 995 AKSRSEYYHLLAEKI 1009 >dbj|BAC45105.1| OJ1705_C03.27 [Oryza sativa (japonica cultivar-group)] Length = 194 Score = 35.6 bits (81), Expect = 0.14 Identities = 7/21 (33%), Positives = 12/21 (56%) Query: 6 DWRTQFPSASRSRIVNKIMET 26 DWRT+ R R+ + I++ Sbjct: 12 DWRTRLGQDIRDRVTHDILQA 32 >pir||FGRTA fibrinogen alpha chain precursor - rat Length = 550 Score = 35.2 bits (80), Expect = 0.17 Identities = 20/143 (13%), Positives = 52/143 (35%), Gaps = 6/143 (4%) Query: 10 QFPSASRSRI---VNKIMETQL--KQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64 Q R RI K++E + L + +++++ V + K+ + + + + Sbjct: 130 QVSEDLRRRIEILKRKVIEKAQQIQVLQXXXXDQLIDMKRLEVDIDIKIRSCKGSCSRSV 189 Query: 65 -RQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 R+I +K + K + + P + G +++Q + + Sbjct: 190 SREINLKDYEGQQKQLEQVIAKELLPAKDRQYLPAIKMSPVPDLVPGSFKSQLQEGPPEW 249 Query: 124 NINALLDTLKKIVPHSGKEGIDE 146 + ++ + GK+G+ E Sbjct: 250 KALTEMRQMRMELERPGKDGLRE 272 >dbj|BAB17855.1| GlcNAcase A [Alteromonas sp. O-7] Length = 863 Score = 34.5 bits (78), Expect = 0.26 Identities = 10/38 (26%), Positives = 19/38 (49%) Query: 33 FIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMK 70 + P ++ A+RFE N + ++ + LR+I K Sbjct: 174 YNTPTDYTQIANAALRFERNQSNISVSKEDALRRINPK 211 >pir||JC7537 beta-N-acetylglucosaminidase - Alteromonas sp. (strain O-7) Length = 863 Score = 34.5 bits (78), Expect = 0.27 Identities = 10/38 (26%), Positives = 19/38 (49%) Query: 33 FIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMK 70 + P ++ A+RFE N + ++ + LR+I K Sbjct: 174 YNTPTDYTQIANAALRFERNQSNISVSKEDALRRINPK 211 >ref|NP_013208.1| RNA EXonuclease; member of 3'->5' exonuclease family. See Moser et al. 1997 Nucleic acids Res. 25:5110-5118; Rex3p [Saccharomyces cerevisiae] pir||S64944 hypothetical protein YLR107w - yeast (Saccharomyces cerevisiae) gb|AAB67549.1| Ylr107wp [Saccharomyces cerevisiae] emb|CAA61685.1| putative orf [Saccharomyces cerevisiae] emb|CAA97672.1| ORF YLR107w [Saccharomyces cerevisiae] Length = 404 Score = 34.1 bits (77), Expect = 0.35 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 1/54 (1%) Query: 10 QFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63 R +I+ K+ + K + +L ++A R E + N+ + Y Sbjct: 14 PLGFQERYKILQKLFKQLQKAYAHTKGTNI-DLERLATRLEVHVAKNSLSGQSY 66 >ref|NP_266213.1| aromatic amino acid specific aminotransferase [Lactococcus lactis subsp. lactis] pir||A86632 aromatic amino acid specific aminotransferase [imported] - Lactococcus lactis subsp. lactis (strain IL1403) gb|AAK04155.1|AE006244_4 aromatic amino acid specific aminotransferase [Lactococcus lactis subsp. lactis] Length = 391 Score = 34.1 bits (77), Expect = 0.40 Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 12/100 (12%) Query: 23 IMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL-------RQICMKMLNME 75 I+ + Q + G ELR+ A F K + + + + I +L++ Sbjct: 53 IVAIENNQSHYTGMAGLLELRQAASEFMNKKYGLSYAAEDEILVTVGVTEAISSVLLSIL 112 Query: 76 TKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQ 115 AG EP + ++ D R Sbjct: 113 V-----AGDEVLIPAPAYPGYEPLITLAGGSLVEIDTRAN 147 >ref|NP_586100.1| MADS domain [Encephalitozoon cuniculi] emb|CAD25704.1| MADS domain [Encephalitozoon cuniculi] Length = 776 Score = 34.1 bits (77), Expect = 0.41 Identities = 12/58 (20%), Positives = 25/58 (42%), Gaps = 5/58 (8%) Query: 10 QFPSASRSRIVNKIMETQLKQ--LPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 R +++ K+ + P P E A+R E++++ + ++ EYLR Sbjct: 1 MLSQEERKQMILKLFVALKESNIFPGYTPVQIKE---AAIRAEQRIYEESGSKEEYLR 55 >ref|NP_217566.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] ref|NP_337653.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] ref|NP_856721.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] pir||E70861 hypothetical protein Rv3050c - Mycobacterium tuberculosis (strain H37RV) emb|CAA16135.1| hypothetical protein Rv3050c [Mycobacterium tuberculosis H37Rv] gb|AAK47467.1| transcriptional regulator, TetR family [Mycobacterium tuberculosis CDC1551] emb|CAD96763.1| PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY ASNC-FAMILY) [Mycobacterium bovis subsp. bovis AF2122/97] Length = 246 Score = 34.1 bits (77), Expect = 0.42 Identities = 13/70 (18%), Positives = 38/70 (53%), Gaps = 1/70 (1%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYL 64 D R++ R ++ N+I++ + + + PE ++ + A + K++ + +++++ L Sbjct: 18 DARSERWREHRKKVRNEIVDAAFRAIDRLGPELSVRQIAEEAGTAKPKIYRHFTDKSDLL 77 Query: 65 RQICMKMLNM 74 I M++ +M Sbjct: 78 EAIGMRLRDM 87 >ref|XP_230743.1| similar to dJ310O13.5 (novel protein similar to H. roretzi HRPET-3) [Homo sapiens] [Rattus norvegicus] Length = 485 Score = 33.7 bits (76), Expect = 0.51 Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 3/76 (3%) Query: 50 EEKLFNNASNQ---TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPA 106 EE + +++ YL+ + +L ++T + D + +P P P Sbjct: 136 EELILRIPTHEIAAASYLQDDALHLLVLKTGLGVDPVPAGMDGSPGSSGRDPGPPGAAPE 195 Query: 107 VNTGDWRTQQPQDSRQ 122 G P D + Sbjct: 196 KRRGRHPGPNPLDPQN 211 >ref|NP_719202.1| sigma-54 dependent transcriptional regulator/sensory box protein [Shewanella oneidensis MR-1] gb|AAN56646.1|AE015801_4 sigma-54 dependent transcriptional regulator/sensory box protein [Shewanella oneidensis MR-1] Length = 488 Score = 33.7 bits (76), Expect = 0.55 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 6/65 (9%) Query: 15 SRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNM 74 +I + K + + P EL+ I R +QT+ L M ++ Sbjct: 370 LGKKIRGVSQKGLKKLMTYSWPGNVRELQNILER------EAILSQTDILHIHAMPTHHL 423 Query: 75 ETKSQ 79 +T++ Sbjct: 424 QTQTA 428 >sp|Q00664|NUDF_EMENI Nuclear migration protein nudF gb|AAA91301.1| NudF gene product Length = 444 Score = 33.3 bits (75), Expect = 0.60 Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 10/83 (12%) Query: 25 ETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQN---- 80 ET ++L F +K E+K A Q R+I L E +S Sbjct: 31 ETLREELHFDESYNEATCKKFEGVLEKKWTGIARLQ----RRIND--LEAEVRSLQAELE 84 Query: 81 AAGSSSADDNTPPLVPEPSVPNN 103 A+ S++ N P P + Sbjct: 85 ASPSAARAKNQDPTNWLPKPSST 107 >ref|ZP_00043576.1| hypothetical protein [Magnetococcus sp. MC-1] Length = 682 Score = 32.9 bits (74), Expect = 0.77 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 5/68 (7%) Query: 64 LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123 ++ I + L ++ NA + N E N+P+ N D R Q R + Sbjct: 272 IQYIAYRALLKSVRNTNAKAGTVVVMNPNNG--EILALVNQPSYNPNDLRHSQDHQRRNR 329 Query: 124 NINALLDT 131 A++DT Sbjct: 330 ---AIMDT 334 >gb|AAF06954.1|AF146529_1 aromatic amino acid aminotransferase [Lactococcus lactis subsp. cremoris] Length = 391 Score = 32.9 bits (74), Expect = 0.84 Identities = 15/91 (16%), Positives = 27/91 (29%), Gaps = 12/91 (13%) Query: 32 PFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL-------RQICMKMLNMETKSQNAAGS 84 + G ELR+ A F K + + + + I +L++ AG Sbjct: 62 HYTGMAGLLELRQAASEFLLKKYGLSYAAEDEILVTVGVTEAISSVLLSILV-----AGD 116 Query: 85 SSADDNTPPLVPEPSVPNNEPAVNTGDWRTQ 115 EP + ++ D R Sbjct: 117 EVLIPAPAYPGYEPLITLAGGSLVEIDTRAN 147 >ref|NP_522520.1| PROBABLE SIGMA-54 INTERACTING TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum] emb|CAD18110.1| PROBABLE SIGMA-54 INTERACTING TRANSCRIPTION REGULATOR PROTEIN [Ralstonia solanacearum] Length = 510 Score = 32.9 bits (74), Expect = 0.93 Identities = 12/68 (17%), Positives = 26/68 (37%), Gaps = 8/68 (11%) Query: 33 FIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92 + P EL + R K+ + +++ + ++ +ET + + A + Sbjct: 396 YPWPGNVRELEHVVSRAALKMLSRGASRDD--------IVTLETGLLDLDAQAVAPPSPA 447 Query: 93 PLVPEPSV 100 L PE S Sbjct: 448 GLPPEASP 455 >gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [Homo sapiens] Length = 1553 Score = 32.9 bits (74), Expect = 0.94 Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 27/146 (18%) Query: 3 TTG---DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLF 54 TTG W R+ +V+K+++ P P + L A + E ++ Sbjct: 564 TTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMY 620 Query: 55 NNASNQTEYLRQICMKMLNM----------ETKSQNAAGSSSA----DDNTPPLVPEPSV 100 +A+N+ EY + K+ + + QN +++ N P + +P Sbjct: 621 ESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQP 680 Query: 101 P--NNEPAVNTGDWRTQQPQDSRQKN 124 +N P + R P + Sbjct: 681 GMTSNGPLPDPSMIRGSVPNQMMPRI 706 >ref|NP_697911.1| trigger factor [Brucella suis 1330] gb|AAN29826.1|AE014393_1 trigger factor [Brucella suis 1330] Length = 485 Score = 32.5 bits (73), Expect = 1.1 Identities = 5/33 (15%), Positives = 15/33 (45%) Query: 9 TQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE 41 +Q+ +R ++ +I++ F P+ + Sbjct: 290 SQYGQVTRQKVKRQILDALDGDYQFETPQKLVD 322 >ref|NP_660201.1| calcium binding protein 4 [Homo sapiens] sp|P57796|CAB4_HUMAN Calcium-binding protein CaBP4 gb|AAK83462.1| calcium-binding protein CaBP4 [Homo sapiens] Length = 275 Score = 32.5 bits (73), Expect = 1.1 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 16/83 (19%) Query: 76 TKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKI 135 + + + N PP E P P + G ++Q R ++L D ++ Sbjct: 57 SSGEQTGPEAPGSSNNPPSTGEG--PAGAPPASPGPASSRQSHRHRP---DSLHDAAQRT 111 Query: 136 V------PH-----SGKEGIDEL 147 G E +DEL Sbjct: 112 YGPLLNRVFGKDRELGPEELDEL 134 >sp|Q8YGT8|TIG_BRUME Trigger factor (TF) Length = 477 Score = 32.5 bits (73), Expect = 1.2 Identities = 5/33 (15%), Positives = 15/33 (45%) Query: 9 TQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE 41 +Q+ +R ++ +I++ F P+ + Sbjct: 282 SQYGQITRQKVKRQILDALDGDYQFETPQKLVD 314 >ref|NP_173115.1| expressed protein [Arabidopsis thaliana] Length = 1706 Score = 32.5 bits (73), Expect = 1.2 Identities = 12/67 (17%), Positives = 29/67 (42%), Gaps = 2/67 (2%) Query: 45 IAVRFEEKLFNNASNQTEYLRQICM--KMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN 102 +A R EE LF A + +Y+ + + ++ ++ Q + +++ P+ Sbjct: 104 VARRLEEGLFKMAVTKEDYMNRSTLESRITSLIKGRQINNYNQRHANSSSVGTMIPTPGL 163 Query: 103 NEPAVNT 109 ++ A N Sbjct: 164 SQTAGNP 170 >ref|NP_539986.1| TRIGGER FACTOR, PPIASE [Brucella melitensis] pir||AG3385 peptidylprolyl isomerase (EC 5.2.1.8) [imported] - Brucella melitensis (strain 16M) gb|AAL52250.1| TRIGGER FACTOR, PPIASE [Brucella melitensis 16M] Length = 485 Score = 32.5 bits (73), Expect = 1.2 Identities = 5/33 (15%), Positives = 15/33 (45%) Query: 9 TQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE 41 +Q+ +R ++ +I++ F P+ + Sbjct: 290 SQYGQITRQKVKRQILDALDGDYQFETPQKLVD 322 >gb|AAK52338.1| PrpR [Burkholderia sacchari] Length = 646 Score = 32.5 bits (73), Expect = 1.3 Identities = 15/106 (14%), Positives = 31/106 (29%), Gaps = 10/106 (9%) Query: 25 ETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASN--QTEYLRQICMKMLNME---TKSQ 79 + + P EL+ + R +L ++ + E LR I ++ + + Sbjct: 536 DALARH---SWPGNVRELQNVVERMVVELADSDVDVLTPEVLRSIAPEVFELRGGAARGD 592 Query: 80 NAAGSSSADDNTPPLVPEPSVP--NNEPAVNTGDWRTQQPQDSRQK 123 AG T + P + QP ++ Sbjct: 593 GHAGRRGVTRCTGHAGRDGRSGRHGTRPGRSAAHLARAQPARGSRR 638 >ref|ZP_00006295.1| hypothetical protein [Rhodobacter sphaeroides] Length = 598 Score = 32.2 bits (72), Expect = 1.6 Identities = 13/78 (16%), Positives = 25/78 (31%), Gaps = 4/78 (5%) Query: 75 ETKSQNAAGSSSADDNTPPLVP----EPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLD 130 ++ A + PL +P P V+ + + RQ+ L Sbjct: 131 RLETALAGSGITLRPVENPLDRLWADQPDPPMGRAFVHPDALAGETGEAKRQRLAQTLAA 190 Query: 131 TLKKIVPHSGKEGIDELM 148 ++ V S + I L+ Sbjct: 191 AGRRAVVLSLPDSICWLL 208 >ref|NP_242889.1| BH2023~unknown [Bacillus halodurans] pir||G83902 hypothetical protein BH2023 [imported] - Bacillus halodurans (strain C-125) dbj|BAB05742.1| BH2023~unknown [Bacillus halodurans] Length = 921 Score = 31.8 bits (71), Expect = 1.7 Identities = 15/47 (31%), Positives = 18/47 (37%), Gaps = 1/47 (2%) Query: 6 DWRTQFPS-ASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEE 51 +W SR V ++ ET L L F PE IA R E Sbjct: 372 NWEKMSELFNEGSRAVREVDETILVALHFTNPETPGRYETIAQRLYE 418 >ref|NP_662989.1| malonyl CoA-acyl carrier protein transacylase [Chlorobium tepidum TLS] gb|AAM73331.1| malonyl CoA-acyl carrier protein transacylase [Chlorobium tepidum TLS] Length = 305 Score = 31.8 bits (71), Expect = 1.7 Identities = 16/90 (17%), Positives = 34/90 (37%), Gaps = 3/90 (3%) Query: 54 FNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWR 113 F+ A + + +R + + M+ Q G+ +A + E A +G + Sbjct: 96 FSGAISFEDAVRLVAKRGELMQNAGQQNPGTMAAIIGMAD---DALDALLEEASASGIVQ 152 Query: 114 TQQPQDSRQKNINALLDTLKKIVPHSGKEG 143 Q I+ +D ++K V + +G Sbjct: 153 AANFNSPGQIVISGDVDAVRKAVELASSKG 182 >ref|NP_524209.2| Chitin synthase 2 CG7464-PA [Drosophila melanogaster] gb|AAF51798.2| CG7464-PA [Drosophila melanogaster] Length = 1416 Score = 31.8 bits (71), Expect = 1.7 Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 7/110 (6%) Query: 11 FPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNA--SNQTEYLRQIC 68 R +V + +T + L R + ++ + FE + F + + + L + Sbjct: 1297 LEGEHRESMVRR--QTIFR-LHETRDKQHSDYSNLVFNFERRFFGDDELNLKNLALNRKS 1353 Query: 69 MKMLNMETKSQ--NAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQ 116 +K+L + NAA + P VP + T R Sbjct: 1354 VKLLQERRSAAKVNAAATPEGTPTPKAGKRPPVVPMAKKVSFTASNRNNM 1403 >ref|NP_001420.1| E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens] sp|Q09472|P300_HUMAN E1A-associated protein p300 pir||A54277 transcription adaptor protein p300 - human gb|AAA18639.1| p300 protein Length = 2414 Score = 31.8 bits (71), Expect = 1.8 Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 27/146 (18%) Query: 3 TTG---DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLF 54 TTG W R+ +V+K+++ P P + L A + E ++ Sbjct: 564 TTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMY 620 Query: 55 NNASNQTEYLRQICMKMLNM----------ETKSQNAAGSSSA----DDNTPPLVPEPSV 100 +A+N+ EY + K+ + + QN +++ N P + +P Sbjct: 621 ESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQP 680 Query: 101 P--NNEPAVNTGDWRTQQPQDSRQKN 124 +N P + R P + Sbjct: 681 GMTSNGPLPDPSMIRGSVPNQMMPRI 706 >ref|NP_302194.1| putative TetR-family transcriptional regulator [Mycobacterium leprae] pir||G87125 probable TetR-family transcription regulator [imported] - Mycobacterium leprae emb|CAC30686.1| putative TetR-family transcriptional regulator [Mycobacterium leprae] Length = 275 Score = 31.8 bits (71), Expect = 1.8 Identities = 12/70 (17%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYL 64 D R++ R ++ +I++ + L + PE E+ + A + K++ + +++++ Sbjct: 47 DARSERWREHRKKVRGEIVDAAFRALDRLGPEVSVREIAEEAGTAKPKIYRHFTDKSDLF 106 Query: 65 RQICMKMLNM 74 I +++ +M Sbjct: 107 EAIGIRLRDM 116 >pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thaliana gb|AAC17068.1| Similar to CREB-binding protein homolog gb|U88570 from D. melanogaster and contains similarity to callus-associated protein gb|U01961 from Nicotiana tabacum. EST gb|W43427 comes from this gene. [Arabidopsis thaliana] Length = 1516 Score = 31.8 bits (71), Expect = 2.1 Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 3/98 (3%) Query: 15 SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR--QICMKM 71 R + +I ++ P E + + +A R EE LF A+ + +Y+ + ++ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 72 LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNT 109 ++ Q + +++ P+ N Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNP 148 >ref|NP_004371.1| CREB binding protein [Homo sapiens] sp|Q92793|CBP_HUMAN CREB-binding protein gb|AAC51770.1| CREB-binding protein Length = 2442 Score = 31.4 bits (70), Expect = 2.2 Identities = 21/113 (18%), Positives = 40/113 (34%), Gaps = 12/113 (10%) Query: 7 WRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASNQT 61 W RS +V+K+++ P P + L A + E ++ +A+++ Sbjct: 592 WHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESANSRD 648 Query: 62 EYLRQICMKML----NMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 EY + K+ +E K ++ N P L + P P Sbjct: 649 EYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPV 701 >gb|AAC51331.2| CREB-binding protein [Homo sapiens] Length = 2442 Score = 31.4 bits (70), Expect = 2.2 Identities = 21/113 (18%), Positives = 40/113 (34%), Gaps = 12/113 (10%) Query: 7 WRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASNQT 61 W RS +V+K+++ P P + L A + E ++ +A+++ Sbjct: 592 WHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESANSRD 648 Query: 62 EYLRQICMKML----NMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 EY + K+ +E K ++ N P L + P P Sbjct: 649 EYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPV 701 >ref|ZP_00105635.1| hypothetical protein [Prochlorococcus marinus subsp. pastoris str. CCMP1378] Length = 634 Score = 31.4 bits (70), Expect = 2.4 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 6/68 (8%) Query: 47 VRFEE--KLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPP-LVPEPSVPNN 103 + EE K A+++ +Y MK L E + + A SS + +N Sbjct: 557 AKVEEKSKALKEATSKEDY---EAMKKLLEELQQELYAIGSSVYQQPGNQPPAPGTPDSN 613 Query: 104 EPAVNTGD 111 E GD Sbjct: 614 ESNDKGGD 621 >ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] gb|AAG60059.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] Length = 1654 Score = 31.4 bits (70), Expect = 2.5 Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 3/98 (3%) Query: 15 SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR--QICMKM 71 R + +I ++ P E + + +A R EE LF A+ + +Y+ + ++ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 72 LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNT 109 ++ Q + +++ P+ N Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNP 148 >ref|NP_345177.1| GTP-binding protein HflX [Streptococcus pneumoniae TIGR4] ref|NP_358183.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] pir||H95077 GTP-binding protein HflX [imported] - Streptococcus pneumoniae (strain TIGR4) pir||E97945 conserved hypothetical protein spr0589 [imported] - Streptococcus pneumoniae (strain R6) gb|AAK74817.1| GTP-binding protein HflX [Streptococcus pneumoniae TIGR4] gb|AAK99393.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 412 Score = 31.4 bits (70), Expect = 2.7 Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLF 54 D R + +I I E ++PF + ++L +A+ EE+ + Sbjct: 342 DSRENLQALLLDKIKE-IFEAFTLRVPFSKSYKIHDLESVAI-LEERDY 388 >gb|AAL54859.1| CREB-binding protein [Aplysia californica] Length = 2245 Score = 31.4 bits (70), Expect = 2.8 Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 12/114 (10%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASNQ 60 DW Q R+ +V+K+++ P + L A + E ++ +A+N+ Sbjct: 504 DWHAQVTQDLRNHLVHKLVQAI---FPTPDQATLRDSRMKNLVAYARKVEGDMYESANNR 560 Query: 61 TEYLRQICMKML----NMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 +Y + K+ +E K +A + P + PN + N Sbjct: 561 GQYYHLLAEKIYKIQKELEEKRIQRMKVQNAPNAQVPGMQGQIHPNAQNGPNNV 614 >ref|NP_485958.1| unknown protein [Nostoc sp. PCC 7120] pir||AH2045 hypothetical protein alr1918 [imported] - Nostoc sp. (strain PCC 7120) dbj|BAB73617.1| ORF_ID:alr1918~unknown protein [Nostoc sp. PCC 7120] Length = 257 Score = 31.0 bits (69), Expect = 3.2 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 12/60 (20%) Query: 14 ASRSRIVNKIMETQLKQLPFI--------RPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65 ++ + + + P+ E +L KIA EE A+NQTE+ R Sbjct: 170 ELEQKV-QVLDDQFNLEQPYSLVATQQRFGEETRRDLAKIAANLEEL---RATNQTEHER 225 >ref|XP_215692.1| similar to myozenin-like 2; calsarcin-1 [Mus musculus] [Rattus norvegicus] Length = 264 Score = 31.0 bits (69), Expect = 3.4 Identities = 13/44 (29%), Positives = 17/44 (38%) Query: 67 ICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 + M N N G S +TPP P+P P N + G Sbjct: 83 HNLAMQNGRIDGSNLEGGSQQAPSTPPNTPDPRSPPNPENIAPG 126 >ref|NP_741151.1| Putative nuclear protein, nematode specific [Caenorhabditis elegans] gb|AAM54164.1|U00066_6 Hypothetical protein R12B2.5b [Caenorhabditis elegans] Length = 777 Score = 31.0 bits (69), Expect = 3.6 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 1/82 (1%) Query: 46 AVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEP 105 A + EE +F ++ EY+R I + + S++AA S + P + N Sbjct: 39 ARQVEEYVFAKCMSKDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTAGNTPA 98 Query: 106 AVNTGDWRTQQPQDSRQKNINA 127 G +R P D + + A Sbjct: 99 GGTPG-YRAPVPPDPQPTSAQA 119 >ref|NP_471700.1| similar to ATP-dependent deoxyribonuclease (subunit B) [Listeria innocua] pir||AD1728 ATP-dependent deoxyribonuclease (chain B) homolog addB [imported] - Listeria innocua (strain Clip11262) emb|CAC97596.1| similar to ATP-dependent deoxyribonuclease (subunit B) [Listeria innocua] Length = 1157 Score = 30.6 bits (68), Expect = 3.8 Identities = 10/50 (20%), Positives = 20/50 (40%) Query: 24 METQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLN 73 +E L +++ I ++EE L +YLR + K++ Sbjct: 138 LEKSAANLSTSVSSKVHDISLIYQKYEELLAGKFLENEDYLRLLADKIIE 187 >ref|ZP_00120204.1| hypothetical protein [Cytophaga hutchinsonii] Length = 568 Score = 30.6 bits (68), Expect = 4.1 Identities = 18/78 (23%), Positives = 32/78 (40%), Gaps = 11/78 (14%) Query: 6 DWRTQFPSASRS-RIVNKIMETQLKQLPFIRPEGTNELRKI---AVRFEEKLFNNASNQT 61 D+ Q I N+I+ Q + E N+++KI R EE + + Sbjct: 421 DFSVQLEIIENQISIENQILTKQKE-------EALNDIQKIQKEKDRIEEDKYKVEVEKE 473 Query: 62 EYLRQICMKMLNMETKSQ 79 L +I +K ++ KS+ Sbjct: 474 TALTEIEIKNTELKVKSE 491 >ref|NP_067478.1| myozenin 2; myozenin-like 2; calsarcin-1 [Mus musculus] emb|CAB92972.1| FATZ related protein 2 [Mus musculus] gb|AAG38939.1| calcineurin-binding protein calsarcin-1 [Mus musculus] gb|AAH24360.1| myozenin 2 [Mus musculus] Length = 264 Score = 30.6 bits (68), Expect = 4.2 Identities = 13/44 (29%), Positives = 17/44 (38%) Query: 67 ICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 + M N N G S +TPP P+P P N + G Sbjct: 83 HNIAMQNGRVDGSNLEGGSQQGPSTPPNTPDPRSPPNPENIAPG 126 >ref|NP_507512.1| Predicted CDS, putative cytoplasmic protein, nematode specific [Caenorhabditis elegans] pir||T20398 hypothetical protein E01B7.2 - Caenorhabditis elegans emb|CAB54214.1| Hypothetical protein E01B7.2 [Caenorhabditis elegans] Length = 230 Score = 30.6 bits (68), Expect = 4.3 Identities = 12/52 (23%), Positives = 19/52 (36%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNA 57 DW+ R + V KI+ T P +EL + E ++ A Sbjct: 56 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRA 107 >ref|NP_828837.1| conserved hypothetical protein [Streptomyces avermitilis] dbj|BAC75372.1| conserved hypothetical protein [Streptomyces avermitilis] Length = 291 Score = 30.6 bits (68), Expect = 4.3 Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 5/57 (8%) Query: 85 SSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGK 141 + D PP P P P W + + N T+ +I+ H K Sbjct: 139 QTDDVQPPPGPPAEDTPTPSPEAAPSAW-----HPADHRITNTSTTTILRILRHLAK 190 >ref|XP_240098.1| hypothetical protein XP_240098 [Rattus norvegicus] Length = 215 Score = 30.6 bits (68), Expect = 4.3 Identities = 10/48 (20%), Positives = 16/48 (32%) Query: 88 DDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKI 135 +N P P PNN+ R+ + L DT ++ Sbjct: 62 SENCLPSTHPPQGPNNQGFAFGASLRSSEVWAPDILVRQPLSDTTRRH 109 >ref|ZP_00109188.1| hypothetical protein [Nostoc punctiforme] Length = 469 Score = 30.6 bits (68), Expect = 4.6 Identities = 10/71 (14%), Positives = 24/71 (33%), Gaps = 2/71 (2%) Query: 34 IRPEGTNELRK-IAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92 + + I + +++F A +Q+E LR ++ + +A + Sbjct: 176 TWQYTLKAITRTIVLSLPQEVFERAIDQSEALRTH-VEQFRVRLSQPQTPQGEAAIELAA 234 Query: 93 PLVPEPSVPNN 103 E +P Sbjct: 235 NHPQEAELPGT 245 >ref|ZP_00087815.1| hypothetical protein [Pseudomonas fluorescens PfO-1] Length = 789 Score = 30.2 bits (67), Expect = 5.1 Identities = 14/101 (13%), Positives = 31/101 (29%), Gaps = 16/101 (15%) Query: 54 FNNASNQTEYLRQICMKMLNMETK----------SQNAAGSSSADDNTPPLVPEPSVPNN 103 + A Q+ R ++ E + SQ + + + P+ P Sbjct: 407 ASRAIQQS---RARSPRIHKAEVQARIEAINASDSQRHSPFAKRIAAQQARLKLPTFPTT 463 Query: 104 EPAVNT--GDWR-TQQPQDSRQKNINALLDTLKKIVPHSGK 141 G R +Q + + N D ++ + H+ + Sbjct: 464 TIGSFPQTGSIRLARQAYKQGKLSANDYHDAMRSEIRHAVQ 504 >pir||E89403 protein C06H5.4 [imported] - Caenorhabditis elegans Length = 337 Score = 30.2 bits (67), Expect = 5.3 Identities = 12/52 (23%), Positives = 19/52 (36%) Query: 6 DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNA 57 DW+ R + V KI+ T P +EL + E ++ A Sbjct: 177 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRA 228 >ref|NP_376184.1| 385aa long conserved hypothetical protein [Sulfolobus tokodaii] dbj|BAB65293.1| 385aa long conserved hypothetical protein [Sulfolobus tokodaii] Length = 385 Score = 30.2 bits (67), Expect = 6.0 Identities = 10/59 (16%), Positives = 19/59 (31%) Query: 80 NAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPH 138 ++ D P L+ N V D D ++ N + D +++ P Sbjct: 278 QRDAKATRFDGPPRLLGLGFNVKNGRLVGPTDLFDDPAFDETRRLANIVADYMRRHGPF 336 >emb|CAB71223.1| possible mucin 1 precursor [Leishmania major] Length = 1413 Score = 29.8 bits (66), Expect = 6.4 Identities = 18/63 (28%), Positives = 24/63 (37%), Gaps = 4/63 (6%) Query: 81 AAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQ-KNINALLDTLKKIV-PH 138 A SS D+TPP + P P DW Q RQ + + T + + P Sbjct: 1177 ADASSPFADSTPPSPTPFTGPVGSPGRTGMDWL--VSQRIRQGLLLPTIQATWRDYLTPL 1234 Query: 139 SGK 141 GK Sbjct: 1235 KGK 1237 >gb|AAC08447.1| CBP [Homo sapiens] Length = 555 Score = 29.8 bits (66), Expect = 6.6 Identities = 21/113 (18%), Positives = 40/113 (34%), Gaps = 12/113 (10%) Query: 7 WRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNASNQT 61 W RS +V+K+++ P P + L A + E ++ +A+++ Sbjct: 326 WHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESANSRD 382 Query: 62 EYLRQICMKML----NMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 EY + K+ +E K ++ N P L + P P Sbjct: 383 EYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPV 435 >ref|NP_463594.1| highly similar to B. subtilis YukA protein [Listeria monocytogenes EGD-e] pir||AF1082 B. subtilis YukA protein homolog lmo0061 [imported] - Listeria monocytogenes (strain EGD-e) emb|CAC98276.1| highly similar to B. subtilis YukA protein [Listeria monocytogenes] Length = 1498 Score = 29.8 bits (66), Expect = 7.1 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 14/70 (20%) Query: 8 RTQFPSASRSRI----------VNKIMETQLKQLP---FIRPEGTNELRKIAVRFEEKLF 54 R ++ S+ R+ ++ ET KQ + P+ EL K+A+R + +++ Sbjct: 275 RKKYKIDSKQRVESYDLYLKRKTKELHETSEKQRHALTYHYPD-VTELEKMALRVDSRIY 333 Query: 55 NNASNQTEYL 64 ++L Sbjct: 334 EKTMFHHDFL 343 >ref|NP_216714.1| mmpS3 [Mycobacterium tuberculosis H37Rv] ref|NP_336726.1| hypothetical protein [Mycobacterium tuberculosis CDC1551] ref|NP_855870.1| PROBABLE CONSERVED MEMBRANE PROTEIN MMPS3 [Mycobacterium bovis subsp. bovis AF2122/97] sp|Q10390|MMS3_MYCTU Putative membrane protein MMPS3 pir||G70784 probable mmpS3 protein - Mycobacterium tuberculosis (strain H37RV) emb|CAA94267.1| mmpS3 [Mycobacterium tuberculosis H37Rv] gb|AAK46540.1| hypothetical protein [Mycobacterium tuberculosis CDC1551] emb|CAD97074.1| PROBABLE CONSERVED MEMBRANE PROTEIN MMPS3 [Mycobacterium bovis subsp. bovis AF2122/97] Length = 299 Score = 29.8 bits (66), Expect = 7.3 Identities = 10/30 (33%), Positives = 12/30 (39%) Query: 91 TPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120 P EP P +EP +TGD R Sbjct: 4 PNPPGREPDEPESEPVSDTGDERASGNHLP 33 >ref|XP_143369.1| similar to protocadherin 16 precursor; fibroblast cadherin FIB1; cadherin 19; fibroblast cadherin 1; dachsous homologue [Homo sapiens] [Mus musculus] Length = 754 Score = 29.8 bits (66), Expect = 7.3 Identities = 15/54 (27%), Positives = 23/54 (41%), Gaps = 4/54 (7%) Query: 69 MKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQ 122 +K +M + + A+GSS+ N V E P+ GD R P +Q Sbjct: 33 LKDSSMSREEEQASGSSAQVFNLSLSVDEGLPPDT----LVGDIRAGLPAAQQQ 82 >ref|NP_469401.1| highly similar to B. subtilis YukA protein [Listeria innocua] pir||AG1439 B. subtilis YukA protein homolog lin0054 [imported] - Listeria innocua (strain Clip11262) emb|CAC95287.1| highly similar to B. subtilis YukA protein [Listeria innocua] Length = 1498 Score = 29.8 bits (66), Expect = 7.6 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 14/70 (20%) Query: 8 RTQFPSASRSRI----------VNKIMETQLKQLP---FIRPEGTNELRKIAVRFEEKLF 54 R ++ S+ RI ++ ET KQ + P+ EL K+A+R + +++ Sbjct: 275 RKKYKIDSKQRIESYDLYLKRKTKELHETSEKQRHALTYHYPD-VTELEKMALRVDSRIY 333 Query: 55 NNASNQTEYL 64 ++L Sbjct: 334 EKTMFHHDFL 343 >ref|NP_543167.1| Fas death domain-associated protein [Rattus norvegicus] sp|Q8VIB2|DAXX_RAT Death domain-associated protein 6 (Daxx) dbj|BAB83524.1| Daxx [Rattus norvegicus] Length = 731 Score = 29.8 bits (66), Expect = 7.8 Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 2/90 (2%) Query: 41 ELRKIAVRFEEKLFNNASNQTEYLRQIC--MKMLNMETKSQNAAGSSSADDNTPPLVPEP 98 E R I R + N + Y+ ++C +K +++ K A +S+ P P Sbjct: 104 EFRNILSRVLSRSRNRPAKLYVYINELCTVLKAHSIKKKLNLAPAASAESSGDNPPTDPP 163 Query: 99 SVPNNEPAVNTGDWRTQQPQDSRQKNINAL 128 S N + RT+ + Q+ L Sbjct: 164 SDLTNTETTASEASRTRGSRRQIQRLEQLL 193 >ref|NP_044842.1| unknown [murid herpesvirus 4] emb|CAA72393.1| ORF2 [Murid herpesvirus 4] gb|AAB66427.1| unknown [murid herpesvirus 4] gb|AAF19270.1|AF105037_2 M2 [murid herpesvirus 4] Length = 199 Score = 29.5 bits (65), Expect = 8.3 Identities = 24/108 (22%), Positives = 37/108 (34%), Gaps = 10/108 (9%) Query: 8 RTQFPSASRSRIVNKIMETQL-----KQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62 RT+FP R R NK+ T + P PE N A EE ++ A+++ Sbjct: 81 RTRFPKTIR-RGFNKLRSTLKSPWKPRPSPVPSPEEVNP----AGSPEENIYETANSEPV 135 Query: 63 YLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTG 110 Y++ I + L M + + P P N Sbjct: 136 YIQPISTRSLMMLDSGSTDSPENLGPPTRPLPKLPNQHPMNPEIRLPI 183 >dbj|BAB21859.1| KIAA1768 protein [Homo sapiens] Length = 1207 Score = 29.5 bits (65), Expect = 8.8 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 24 METQLKQLPFIRPEGTNELRKIAVRFEEKL-FNNASNQTEYLRQICMKMLNMETKSQ-NA 81 +E L ++ P +L I EEKL ++ L + ++L++E+ Sbjct: 151 LEALLSRMQAEDPGDRPDLESIIALCEEKLQLTSSCRVCRSLSAVGRRVLSIESFGALQD 210 Query: 82 AGSSSADDNTPPLVP----EPSVPNNEPAVNTGDWRTQQPQDSRQKNINA 127 SS + P P P+ +P V + + Sbjct: 211 VSESSWRERPAPGNAGPRRPPGDPSTDPEVLPTPEGPESETSRGPRASPT 260 >ref|XP_113594.1| similar to KIAA1768 protein [Homo sapiens] Length = 1141 Score = 29.5 bits (65), Expect = 9.6 Identities = 19/110 (17%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 24 METQLKQLPFIRPEGTNELRKIAVRFEEKL-FNNASNQTEYLRQICMKMLNMETKSQ-NA 81 +E L ++ P +L I EEKL ++ L + ++L++E+ Sbjct: 85 LEALLSRMQAEDPGDRPDLESIIALCEEKLQLTSSCRVCRSLSAVGRRVLSIESFGALQD 144 Query: 82 AGSSSADDNTPPLVP----EPSVPNNEPAVNTGDWRTQQPQDSRQKNINA 127 SS + P P P+ +P V + + Sbjct: 145 VSESSWRERPAPGNAGPRRPPGDPSTDPEVLPTPEGPESETSRGPRASPT 194 Database: /local/data/sequences/fasta/nr Posted date: Jun 30, 2003 5:37 PM Number of letters in database: 468,778,868 Number of sequences in database: 1,459,938 Lambda K H 0.302 0.153 0.414 Lambda K H 0.267 0.0467 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 701,105,871 Number of Sequences: 1459938 Number of extensions: 29044106 Number of successful extensions: 144781 Number of sequences better than 10.0: 1513 Number of HSP's better than 10.0 without gapping: 590 Number of HSP's successfully gapped in prelim test: 957 Number of HSP's that attempted gapping in prelim test: 140036 Number of HSP's gapped (non-prelim): 3883 length of query: 148 length of database: 468,778,868 effective HSP length: 124 effective length of query: 24 effective length of database: 287,746,556 effective search space: 6905917344 effective search space used: 6905917344 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.0 bits) S2: 65 (29.5 bits)