Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1056541962-015436-31287 Query= SPBC146.01 ||SPBP35G2.15|RNA polymerase II holoenzyme component (predicted)|Schizosaccharomyces pombe||chr 2||Manual (1063 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,459,100 sequences; 468,613,799 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs
RID: 1056541962-015436-31287
Query= SPBC146.01 ||SPBP35G2.15|RNA polymerase II holoenzyme component (predicted)|Schizosaccharomyces pombe||chr 2||Manual (1063 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,459,100 sequences; 468,613,799 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Score E Sequences producing significant alignments: (bits) Value gi|19112182|ref|NP_595390.1| putative transcriptional regul... 825 0.0 gi|7522544|pir||T39415 probable transcription regulator SPB... 748 0.0 gi|7493813|pir||T18235 transcription activator GAL11 homolo... 54 2e-05 gi|1169834|sp|P32257|GALY_KLULA TRANSCRIPTION REGULATORY PR... 50 3e-04 gi|171550|gb|AAA34622.1| auxiliary activator 45 0.008 gi|6324522|ref|NP_014591.1| Regulates transcription of a di... 45 0.009 gi|984193|emb|CAA62537.1| transcriptional activator [Saccha... 44 0.016 Alignments >gi|19112182|ref|NP_595390.1| putative transcriptional regulatory protein [Schizosaccharomyces pombe] gi|7573208|emb|CAB87377.1| SPBP35G2.15 [Schizosaccharomyces pombe] Length = 653 Score = 825 bits (2132), Expect = 0.0 Identities = 491/653 (75%), Positives = 491/653 (75%) Query: 1 MRDRALPCKCMPSFFKTLHLTFVFSAQTLRIISPSISEVQLMNMALSFERQAFDGASSKN 60 MRDRALPCKCMPSFFKTLHLTFVFSAQTLRIISPSISEVQLMNMALSFERQAFDGASSKN Sbjct: 1 MRDRALPCKCMPSFFKTLHLTFVFSAQTLRIISPSISEVQLMNMALSFERQAFDGASSKN 60 Query: 61 EYLTTCGKKTAQLRDQIRDTLQATQMKQMPSVYNNAGNVGALPTAGPNRLANNPRVMPRL 120 EYLTTCGKKTAQLRDQIRDTLQATQMKQMPSVYNNAGNVGALPTAGPNRLANNPRVMPRL Sbjct: 61 EYLTTCGKKTAQLRDQIRDTLQATQMKQMPSVYNNAGNVGALPTAGPNRLANNPRVMPRL 120 Query: 121 QNQNVPMQAGMQQFARNMKLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPT 180 QNQNVPMQAGMQQFARNMKLTP ASSPT Sbjct: 121 QNQNVPMQAGMQQFARNMKLTPQQRQFLLQQSQIQQQRQQQQQQSQQPQQTQQPQASSPT 180 Query: 181 APNTEANQQRSGSVPGRIVPAXXXXXXXXXXXXITALLARNGNPPIPMQKLQSMPPARLI 240 APNTEANQQRSGSVPGRIVPA ITALLARNGNPPIPMQKLQSMPPARLI Sbjct: 181 APNTEANQQRSGSVPGRIVPALTQQQLNNLCNQITALLARNGNPPIPMQKLQSMPPARLI 240 Query: 241 SIYQNQIQKFRSLQHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQAPQNAFFPN 300 SIYQNQIQKFRSLQHM KQAPQNAFFPN Sbjct: 241 SIYQNQIQKFRSLQHMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQAPQNAFFPN 300 Query: 301 PQGNVGAQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMLNIPVPKQLF 360 PQGNVGAQSL EMLNIPVPKQLF Sbjct: 301 PQGNVGAQSLQSMSPQDQPSTQQQQPQRTAAPPNNPNVNATNNNRINIEMLNIPVPKQLF 360 Query: 361 DQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYRKXXXXXXXXXXXXXNKIQNARM 420 DQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYRK NKIQNARM Sbjct: 361 DQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYRKHLQIILQHRQQQLNKIQNARM 420 Query: 421 NSQNAPNTNKLGNPQPDNTGNPXXXXXXXXXXXXXXXXXXLHRTSNPTSASVTSQNGQQP 480 NSQNAPNTNKLGNPQPDNTGNP LHRTSNPTSASVTSQNGQQP Sbjct: 421 NSQNAPNTNKLGNPQPDNTGNPQAFSQQAFAQQQQQQQQQLHRTSNPTSASVTSQNGQQP 480 Query: 481 INTKLSANAAKTNYQSYLTNKARNATQPTQPPVSQVDYSNNLPPNLDXXXXXXXXXXXXX 540 INTKLSANAAKTNYQSYLTNKARNATQPTQPPVSQVDYSNNLPPNLD Sbjct: 481 INTKLSANAAKTNYQSYLTNKARNATQPTQPPVSQVDYSNNLPPNLDTSSTFRSSASPPS 540 Query: 541 XXTKAGNEALSVPLSGARNTAASRPTNLAAGNSSASIVQQLLECGGTMGQQKMTSRIREL 600 TKAGNEALSVPLSGARNTAASRPTNLAAGNSSASIVQQLLECGGTMGQQKMTSRIREL Sbjct: 541 AFTKAGNEALSVPLSGARNTAASRPTNLAAGNSSASIVQQLLECGGTMGQQKMTSRIREL 600 Query: 601 TERVMHSLMRPVPLDLPHDQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEE 653 TERVMHSLMRPVPLDLPHDQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEE Sbjct: 601 TERVMHSLMRPVPLDLPHDQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEE 653 >gi|7522544|pir||T39415 probable transcription regulator SPBC146.01 - fission yeast (Schizosaccharomyces pombe) (fragment) gi|5441483|emb|CAB46754.1| SPBC146.01 [Schizosaccharomyces pombe] Length = 445 Score = 748 bits (1930), Expect = 0.0 Identities = 419/445 (94%), Positives = 419/445 (94%) Query: 619 DQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQGVFT 678 DQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQGVFT Sbjct: 1 DQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQGVFT 60 Query: 679 CAPQTLAKIKEKTSRYFAFVKAQLLRLHHEVNNNNMSIQNALAHISSLRTASINXXXXXX 738 CAPQTLAKIKEKTSRYFAFVKAQLLRLHHEVNNNNMSIQNALAHISSLRTASIN Sbjct: 61 CAPQTLAKIKEKTSRYFAFVKAQLLRLHHEVNNNNMSIQNALAHISSLRTASINQQQQPQ 120 Query: 739 XXXXXXXXXXXXXXXXXXXXNVRPINGSIPNAQPSVPGQAQPAAKANSVGNTSFPVDSKL 798 NVRPINGSIPNAQPSVPGQAQPAAKANSVGNTSFPVDSKL Sbjct: 121 PQSQQQQQASQFPQAPSVSSNVRPINGSIPNAQPSVPGQAQPAAKANSVGNTSFPVDSKL 180 Query: 799 AFQSLDVSQPDLQAKQKIASQVMKHGLKPEDLKLPPSKKKKIENLSTVQKPKDSVVNTPD 858 AFQSLDVSQPDLQAKQKIASQVMKHGLKPEDLKLPPSKKKKIENLSTVQKPKDSVVNTPD Sbjct: 181 AFQSLDVSQPDLQAKQKIASQVMKHGLKPEDLKLPPSKKKKIENLSTVQKPKDSVVNTPD 240 Query: 859 VIMSSVDEIPSSVSPGTIAKEEGMAKAREEAIANPLKYAIDAFVAVDHEEEVSAIKSSQT 918 VIMSSVDEIPSSVSPGTIAKEEGMAKAREEAIANPLKYAIDAFVAVDHEEEVSAIKSSQT Sbjct: 241 VIMSSVDEIPSSVSPGTIAKEEGMAKAREEAIANPLKYAIDAFVAVDHEEEVSAIKSSQT 300 Query: 919 PSSILKTPQSFFIPPSTPDLSFTDNKNSLSPSNILSLDGKFSFNDDSELWADLGNEINSE 978 PSSILKTPQSFFIPPSTPDLSFTDNKNSLSPSNILSLDGKFSFNDDSELWADLGNEINSE Sbjct: 301 PSSILKTPQSFFIPPSTPDLSFTDNKNSLSPSNILSLDGKFSFNDDSELWADLGNEINSE 360 Query: 979 IGFLKEPDTMNLALDADKDKTKMQNKLTQINFDESCFLDPAIDDKDPWNEMLHEKKVLLK 1038 IGFLKEPDTMNLALDADKDKTKMQNKLTQINFDESCFLDPAIDDKDPWNEMLHEKKVLLK Sbjct: 361 IGFLKEPDTMNLALDADKDKTKMQNKLTQINFDESCFLDPAIDDKDPWNEMLHEKKVLLK 420 Query: 1039 QLQVGNEDEDNIAFPTSTNIWQVVI 1063 QLQVGNEDEDNIAFPTSTNIWQVVI Sbjct: 421 QLQVGNEDEDNIAFPTSTNIWQVVI 445 >gi|7493813|pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) gi|3859719|emb|CAA21993.1| possible regulatory protein [Candida albicans] Length = 1145 Score = 53.9 bits (128), Expect = 2e-05 Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 10/146 (6%) Query: 559 NTAASRPTNLAAGNSSASIVQQLLECGGTMGQQKMTSRIRELTERVMHS--LMRPVPLDL 616 N RP A + +SI+ L + ++ R+R+L E V + ++R V L Sbjct: 579 NINRGRPVTAPANITMSSILPPLTD--------EVKLRLRQLIEEVSRNNVVLRDVTSLL 630 Query: 617 PHDQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQGV 676 + K + + + + +I FY LT N + T +LIQM+++ K L+ L +G+ Sbjct: 631 SNQDKTTVRDSMNRIQEQYGNVDSIISYFYLLTKNGDGTKRLIQMKYMTKNILDNLHRGI 690 Query: 677 FTCAPQTLAKIKEKTSRYFAFVKAQL 702 + P L K++ + ++YF +VK Q+ Sbjct: 691 YLAGPDLLEKVRSQYAKYFEYVKEQI 716 >gi|1169834|sp|P32257|GALY_KLULA TRANSCRIPTION REGULATORY PROTEIN GAL11 gi|101140|pir||S19033 transcription activator GAL11 - yeast (Kluyveromyces marxianus var. lactis) (fragment) gi|295684|gb|AAA35254.1| GAL11 transcription activator Length = 1008 Score = 49.7 bits (117), Expect = 3e-04 Identities = 31/94 (32%), Positives = 49/94 (52%) Query: 616 LPHDQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQG 675 L +DQK I S + + +FS I Y LT NEE QL+Q+R + + +E +G Sbjct: 501 LTNDQKQQIRSKLHANQQLFSSVESFIPTLYMLTRNEEHIRQLLQIRMLTREIMEKAVRG 560 Query: 676 VFTCAPQTLAKIKEKTSRYFAFVKAQLLRLHHEV 709 VF P + K+ + +Y+ + K QLLR ++ Sbjct: 561 VFLVEPNVVDKVIFRYQKYYEYTKEQLLRRQQQL 594 >gi|171550|gb|AAA34622.1| auxiliary activator Length = 1081 Score = 44.7 bits (104), Expect = 0.008 Identities = 19/50 (38%), Positives = 31/50 (62%) Query: 349 EMLNIPVPKQLFDQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYR 398 +M P+PKQL +IPN+PPN+ W+ V L Q + L P+ ++ +Y+ Sbjct: 172 QMKVAPIPKQLLQRIPNIPPNINTWQQVTALAQQKLLTPQDMEAAKEVYK 221 >gi|6324522|ref|NP_014591.1| Regulates transcription of a diverse array of genes. Required for mating and sporulation.; Gal11p [Saccharomyces cerevisiae] gi|2507028|sp|P19659|GALY_YEAST TRANSCRIPTION REGULATORY PROTEIN GAL11 gi|2133177|pir||S66736 transcription activator GAL11 - yeast (Saccharomyces cerevisiae) gi|1419856|emb|CAA99056.1| ORF YOL051w [Saccharomyces cerevisiae] Length = 1081 Score = 44.7 bits (104), Expect = 0.009 Identities = 19/50 (38%), Positives = 31/50 (62%) Query: 349 EMLNIPVPKQLFDQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYR 398 +M P+PKQL +IPN+PPN+ W+ V L Q + L P+ ++ +Y+ Sbjct: 172 QMKVAPIPKQLLQRIPNIPPNINTWQQVTALAQQKLLTPQDMEAAKEVYK 221 >gi|984193|emb|CAA62537.1| transcriptional activator [Saccharomyces cerevisiae] Length = 351 Score = 43.9 bits (102), Expect = 0.016 Identities = 19/50 (38%), Positives = 31/50 (62%) Query: 349 EMLNIPVPKQLFDQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYR 398 +M P+PKQL +IPN+PPN+ W+ V L Q + L P+ ++ +Y+ Sbjct: 172 QMKVAPIPKQLLQRIPNIPPNINTWQQVTALAQQKLLTPQDMEAAKEVYK 221
Score E Sequences producing significant alignments: (bits) Value gi|19112182|ref|NP_595390.1| putative transcriptional regul... 825 0.0 gi|7522544|pir||T39415 probable transcription regulator SPB... 748 0.0 gi|7493813|pir||T18235 transcription activator GAL11 homolo... 54 2e-05 gi|1169834|sp|P32257|GALY_KLULA TRANSCRIPTION REGULATORY PR... 50 3e-04 gi|171550|gb|AAA34622.1| auxiliary activator 45 0.008 gi|6324522|ref|NP_014591.1| Regulates transcription of a di... 45 0.009 gi|984193|emb|CAA62537.1| transcriptional activator [Saccha... 44 0.016
>gi|19112182|ref|NP_595390.1| putative transcriptional regulatory protein [Schizosaccharomyces pombe] gi|7573208|emb|CAB87377.1| SPBP35G2.15 [Schizosaccharomyces pombe] Length = 653 Score = 825 bits (2132), Expect = 0.0 Identities = 491/653 (75%), Positives = 491/653 (75%) Query: 1 MRDRALPCKCMPSFFKTLHLTFVFSAQTLRIISPSISEVQLMNMALSFERQAFDGASSKN 60 MRDRALPCKCMPSFFKTLHLTFVFSAQTLRIISPSISEVQLMNMALSFERQAFDGASSKN Sbjct: 1 MRDRALPCKCMPSFFKTLHLTFVFSAQTLRIISPSISEVQLMNMALSFERQAFDGASSKN 60 Query: 61 EYLTTCGKKTAQLRDQIRDTLQATQMKQMPSVYNNAGNVGALPTAGPNRLANNPRVMPRL 120 EYLTTCGKKTAQLRDQIRDTLQATQMKQMPSVYNNAGNVGALPTAGPNRLANNPRVMPRL Sbjct: 61 EYLTTCGKKTAQLRDQIRDTLQATQMKQMPSVYNNAGNVGALPTAGPNRLANNPRVMPRL 120 Query: 121 QNQNVPMQAGMQQFARNMKLTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSPT 180 QNQNVPMQAGMQQFARNMKLTP ASSPT Sbjct: 121 QNQNVPMQAGMQQFARNMKLTPQQRQFLLQQSQIQQQRQQQQQQSQQPQQTQQPQASSPT 180 Query: 181 APNTEANQQRSGSVPGRIVPAXXXXXXXXXXXXITALLARNGNPPIPMQKLQSMPPARLI 240 APNTEANQQRSGSVPGRIVPA ITALLARNGNPPIPMQKLQSMPPARLI Sbjct: 181 APNTEANQQRSGSVPGRIVPALTQQQLNNLCNQITALLARNGNPPIPMQKLQSMPPARLI 240 Query: 241 SIYQNQIQKFRSLQHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQAPQNAFFPN 300 SIYQNQIQKFRSLQHM KQAPQNAFFPN Sbjct: 241 SIYQNQIQKFRSLQHMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQAPQNAFFPN 300 Query: 301 PQGNVGAQSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMLNIPVPKQLF 360 PQGNVGAQSL EMLNIPVPKQLF Sbjct: 301 PQGNVGAQSLQSMSPQDQPSTQQQQPQRTAAPPNNPNVNATNNNRINIEMLNIPVPKQLF 360 Query: 361 DQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYRKXXXXXXXXXXXXXNKIQNARM 420 DQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYRK NKIQNARM Sbjct: 361 DQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYRKHLQIILQHRQQQLNKIQNARM 420 Query: 421 NSQNAPNTNKLGNPQPDNTGNPXXXXXXXXXXXXXXXXXXLHRTSNPTSASVTSQNGQQP 480 NSQNAPNTNKLGNPQPDNTGNP LHRTSNPTSASVTSQNGQQP Sbjct: 421 NSQNAPNTNKLGNPQPDNTGNPQAFSQQAFAQQQQQQQQQLHRTSNPTSASVTSQNGQQP 480 Query: 481 INTKLSANAAKTNYQSYLTNKARNATQPTQPPVSQVDYSNNLPPNLDXXXXXXXXXXXXX 540 INTKLSANAAKTNYQSYLTNKARNATQPTQPPVSQVDYSNNLPPNLD Sbjct: 481 INTKLSANAAKTNYQSYLTNKARNATQPTQPPVSQVDYSNNLPPNLDTSSTFRSSASPPS 540 Query: 541 XXTKAGNEALSVPLSGARNTAASRPTNLAAGNSSASIVQQLLECGGTMGQQKMTSRIREL 600 TKAGNEALSVPLSGARNTAASRPTNLAAGNSSASIVQQLLECGGTMGQQKMTSRIREL Sbjct: 541 AFTKAGNEALSVPLSGARNTAASRPTNLAAGNSSASIVQQLLECGGTMGQQKMTSRIREL 600 Query: 601 TERVMHSLMRPVPLDLPHDQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEE 653 TERVMHSLMRPVPLDLPHDQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEE Sbjct: 601 TERVMHSLMRPVPLDLPHDQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEE 653
>gi|7522544|pir||T39415 probable transcription regulator SPBC146.01 - fission yeast (Schizosaccharomyces pombe) (fragment) gi|5441483|emb|CAB46754.1| SPBC146.01 [Schizosaccharomyces pombe] Length = 445 Score = 748 bits (1930), Expect = 0.0 Identities = 419/445 (94%), Positives = 419/445 (94%) Query: 619 DQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQGVFT 678 DQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQGVFT Sbjct: 1 DQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQGVFT 60 Query: 679 CAPQTLAKIKEKTSRYFAFVKAQLLRLHHEVNNNNMSIQNALAHISSLRTASINXXXXXX 738 CAPQTLAKIKEKTSRYFAFVKAQLLRLHHEVNNNNMSIQNALAHISSLRTASIN Sbjct: 61 CAPQTLAKIKEKTSRYFAFVKAQLLRLHHEVNNNNMSIQNALAHISSLRTASINQQQQPQ 120 Query: 739 XXXXXXXXXXXXXXXXXXXXNVRPINGSIPNAQPSVPGQAQPAAKANSVGNTSFPVDSKL 798 NVRPINGSIPNAQPSVPGQAQPAAKANSVGNTSFPVDSKL Sbjct: 121 PQSQQQQQASQFPQAPSVSSNVRPINGSIPNAQPSVPGQAQPAAKANSVGNTSFPVDSKL 180 Query: 799 AFQSLDVSQPDLQAKQKIASQVMKHGLKPEDLKLPPSKKKKIENLSTVQKPKDSVVNTPD 858 AFQSLDVSQPDLQAKQKIASQVMKHGLKPEDLKLPPSKKKKIENLSTVQKPKDSVVNTPD Sbjct: 181 AFQSLDVSQPDLQAKQKIASQVMKHGLKPEDLKLPPSKKKKIENLSTVQKPKDSVVNTPD 240 Query: 859 VIMSSVDEIPSSVSPGTIAKEEGMAKAREEAIANPLKYAIDAFVAVDHEEEVSAIKSSQT 918 VIMSSVDEIPSSVSPGTIAKEEGMAKAREEAIANPLKYAIDAFVAVDHEEEVSAIKSSQT Sbjct: 241 VIMSSVDEIPSSVSPGTIAKEEGMAKAREEAIANPLKYAIDAFVAVDHEEEVSAIKSSQT 300 Query: 919 PSSILKTPQSFFIPPSTPDLSFTDNKNSLSPSNILSLDGKFSFNDDSELWADLGNEINSE 978 PSSILKTPQSFFIPPSTPDLSFTDNKNSLSPSNILSLDGKFSFNDDSELWADLGNEINSE Sbjct: 301 PSSILKTPQSFFIPPSTPDLSFTDNKNSLSPSNILSLDGKFSFNDDSELWADLGNEINSE 360 Query: 979 IGFLKEPDTMNLALDADKDKTKMQNKLTQINFDESCFLDPAIDDKDPWNEMLHEKKVLLK 1038 IGFLKEPDTMNLALDADKDKTKMQNKLTQINFDESCFLDPAIDDKDPWNEMLHEKKVLLK Sbjct: 361 IGFLKEPDTMNLALDADKDKTKMQNKLTQINFDESCFLDPAIDDKDPWNEMLHEKKVLLK 420 Query: 1039 QLQVGNEDEDNIAFPTSTNIWQVVI 1063 QLQVGNEDEDNIAFPTSTNIWQVVI Sbjct: 421 QLQVGNEDEDNIAFPTSTNIWQVVI 445
>gi|7493813|pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) gi|3859719|emb|CAA21993.1| possible regulatory protein [Candida albicans] Length = 1145 Score = 53.9 bits (128), Expect = 2e-05 Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 10/146 (6%) Query: 559 NTAASRPTNLAAGNSSASIVQQLLECGGTMGQQKMTSRIRELTERVMHS--LMRPVPLDL 616 N RP A + +SI+ L + ++ R+R+L E V + ++R V L Sbjct: 579 NINRGRPVTAPANITMSSILPPLTD--------EVKLRLRQLIEEVSRNNVVLRDVTSLL 630 Query: 617 PHDQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQGV 676 + K + + + + +I FY LT N + T +LIQM+++ K L+ L +G+ Sbjct: 631 SNQDKTTVRDSMNRIQEQYGNVDSIISYFYLLTKNGDGTKRLIQMKYMTKNILDNLHRGI 690 Query: 677 FTCAPQTLAKIKEKTSRYFAFVKAQL 702 + P L K++ + ++YF +VK Q+ Sbjct: 691 YLAGPDLLEKVRSQYAKYFEYVKEQI 716
>gi|1169834|sp|P32257|GALY_KLULA TRANSCRIPTION REGULATORY PROTEIN GAL11 gi|101140|pir||S19033 transcription activator GAL11 - yeast (Kluyveromyces marxianus var. lactis) (fragment) gi|295684|gb|AAA35254.1| GAL11 transcription activator Length = 1008 Score = 49.7 bits (117), Expect = 3e-04 Identities = 31/94 (32%), Positives = 49/94 (52%) Query: 616 LPHDQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQG 675 L +DQK I S + + +FS I Y LT NEE QL+Q+R + + +E +G Sbjct: 501 LTNDQKQQIRSKLHANQQLFSSVESFIPTLYMLTRNEEHIRQLLQIRMLTREIMEKAVRG 560 Query: 676 VFTCAPQTLAKIKEKTSRYFAFVKAQLLRLHHEV 709 VF P + K+ + +Y+ + K QLLR ++ Sbjct: 561 VFLVEPNVVDKVIFRYQKYYEYTKEQLLRRQQQL 594
>gi|171550|gb|AAA34622.1| auxiliary activator Length = 1081 Score = 44.7 bits (104), Expect = 0.008 Identities = 19/50 (38%), Positives = 31/50 (62%) Query: 349 EMLNIPVPKQLFDQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYR 398 +M P+PKQL +IPN+PPN+ W+ V L Q + L P+ ++ +Y+ Sbjct: 172 QMKVAPIPKQLLQRIPNIPPNINTWQQVTALAQQKLLTPQDMEAAKEVYK 221
>gi|6324522|ref|NP_014591.1| Regulates transcription of a diverse array of genes. Required for mating and sporulation.; Gal11p [Saccharomyces cerevisiae] gi|2507028|sp|P19659|GALY_YEAST TRANSCRIPTION REGULATORY PROTEIN GAL11 gi|2133177|pir||S66736 transcription activator GAL11 - yeast (Saccharomyces cerevisiae) gi|1419856|emb|CAA99056.1| ORF YOL051w [Saccharomyces cerevisiae] Length = 1081 Score = 44.7 bits (104), Expect = 0.009 Identities = 19/50 (38%), Positives = 31/50 (62%) Query: 349 EMLNIPVPKQLFDQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYR 398 +M P+PKQL +IPN+PPN+ W+ V L Q + L P+ ++ +Y+ Sbjct: 172 QMKVAPIPKQLLQRIPNIPPNINTWQQVTALAQQKLLTPQDMEAAKEVYK 221
>gi|984193|emb|CAA62537.1| transcriptional activator [Saccharomyces cerevisiae] Length = 351 Score = 43.9 bits (102), Expect = 0.016 Identities = 19/50 (38%), Positives = 31/50 (62%) Query: 349 EMLNIPVPKQLFDQIPNLPPNVKIWRDVLELGQSQRLPPEQLKLIGMLYR 398 +M P+PKQL +IPN+PPN+ W+ V L Q + L P+ ++ +Y+ Sbjct: 172 QMKVAPIPKQLLQRIPNIPPNINTWQQVTALAQQKLLTPQDMEAAKEVYK 221
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Jun 25, 2003 2:03 AM Number of letters in database: 468,613,799 Number of sequences in database: 1,459,100 Lambda K H 0.313 0.129 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 780,418,599 Number of Sequences: 1459100 Number of extensions: 27772833 Number of successful extensions: 65277 Number of sequences better than 1.0: 23 Number of HSP's better than 1.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 65232 Number of HSP's gapped (non-prelim): 64 length of query: 1063 length of database: 468,613,799 effective HSP length: 134 effective length of query: 929 effective length of database: 273,094,399 effective search space: 253704696671 effective search space used: 253704696671 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 87 (38.1 bits)