RID=1056541557-012069-21579, gi|1169834|sp|P32257|GALY_KLULA TRANSCRIPTION REGULATORY PROTEIN GAL11 BLASTP 2.2.6 [Apr-09-2003]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1056541557-012069-21579

Query= gi|1169834|sp|P32257|GALY_KLULA TRANSCRIPTION REGULATORY PROTEIN GAL11 (1008 letters)

Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,459,100 sequences; 468,613,799 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs


Distribution of 8 Blast Hits on the Query Sequence




                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|1169834|sp|P32257|GALY_KLULA  TRANSCRIPTION REGULATORY PR...  1199   0.0  
gi|171550|gb|AAA34622.1|  auxiliary activator                     169   3e-40
gi|6324522|ref|NP_014591.1|  Regulates transcription of a di...   167   8e-40
gi|7493813|pir||T18235  transcription activator GAL11 homolo...    79   3e-13
gi|7522544|pir||T39415  probable transcription regulator SPB...    44   0.013
gi|7493771|pir||T18249  conserved hypothetical protein - yea...    39   0.32 
Alignments
>gi|1169834|sp|P32257|GALY_KLULA TRANSCRIPTION REGULATORY PROTEIN GAL11
 gi|101140|pir||S19033 transcription activator GAL11 - yeast (Kluyveromyces marxianus var.
            lactis) (fragment)
 gi|295684|gb|AAA35254.1| GAL11 transcription activator
          Length = 1008

 Score = 1199 bits (3103), Expect = 0.0
 Identities = 727/1008 (72%), Positives = 727/1008 (72%)

Query: 1    MSRINGGEKANFNLEKLKKSAEQFESSLYASCNSKDLYLDAMRKRIAAMDSAKRKSIEXX 60
            MSRINGGEKANFNLEKLKKSAEQFESSLYASCNSKDLYLDAMRKRIAAMDSAKRKSIE  
Sbjct: 1    MSRINGGEKANFNLEKLKKSAEQFESSLYASCNSKDLYLDAMRKRIAAMDSAKRKSIEAQ 60

Query: 61   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGIPANINAQMFLNXXXXXXXXX 120
                                                 NGIPANINAQMFLN         
Sbjct: 61   RQKLAQAQAQAQAVQRQQQQQQQQHHMQQQGSGQQQANGIPANINAQMFLNQQAQARQQA 120

Query: 121  XXXIRSTLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANELKVTEIPRELLQKI 180
               IRSTLTG                                 ANELKVTEIPRELLQKI
Sbjct: 121  QRQIRSTLTGQQQQQPMPQQPQPQQQQPNMMRPQLTLQQQQQLANELKVTEIPRELLQKI 180

Query: 181  PNLPPGITTWPQITFWAQKNRPSQNDLIITKKVYXXXXXXXXXXXXXXXXVNRMNTSVQQ 240
            PNLPPGITTWPQITFWAQKNRPSQNDLIITKKVY                VNRMNTSVQQ
Sbjct: 181  PNLPPGITTWPQITFWAQKNRPSQNDLIITKKVYQLHQQLLNKSKLQQSNVNRMNTSVQQ 240

Query: 241  PGMGVQQSPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPPAVLGRLNQVF 300
            PGMGVQQSPN                                     EPPAVLGRLNQVF
Sbjct: 241  PGMGVQQSPNQRMNMNQVPQQQQQVRQQQQQQQQQQQQQHKQQPQHQEPPAVLGRLNQVF 300

Query: 301  TQAEQKMLYEAGKKMIENLQRSGKLPPNLDSQQQLLYIKKYMNQMVLKKMQQLGIPIPMP 360
            TQAEQKMLYEAGKKMIENLQRSGKLPPNLDSQQQLLYIKKYMNQMVLKKMQQLGIPIPMP
Sbjct: 301  TQAEQKMLYEAGKKMIENLQRSGKLPPNLDSQQQLLYIKKYMNQMVLKKMQQLGIPIPMP 360

Query: 361  GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMGMK 420
            GS                                                     AMGMK
Sbjct: 361  GSAQQQSQLLQQQQQQQQQQQQQQRQQQIPQVQQAPLQQPQVQPPQSQQAQSRRQAMGMK 420

Query: 421  PTPVIPNAGVMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKISVPRPTEQDMLAL 480
            PTPVIPNAGVMK                                SKISVPRPTEQDMLAL
Sbjct: 421  PTPVIPNAGVMKPQPQQTPQNIQQPMMQQQSSPPPQQQQQQQQQSKISVPRPTEQDMLAL 480

Query: 481  KKLNAEVTKNPVKLNDITNRLTNDQKQQIRSKLHANQQLFSSVESFIPTLYMLTRNEEHI 540
            KKLNAEVTKNPVKLNDITNRLTNDQKQQIRSKLHANQQLFSSVESFIPTLYMLTRNEEHI
Sbjct: 481  KKLNAEVTKNPVKLNDITNRLTNDQKQQIRSKLHANQQLFSSVESFIPTLYMLTRNEEHI 540

Query: 541  RQLLQIRMLTREIMEKAVRGVFLVEPNVVDKVIFRYQKYYEYTKEXXXXXXXXXXXXXXX 600
            RQLLQIRMLTREIMEKAVRGVFLVEPNVVDKVIFRYQKYYEYTKE               
Sbjct: 541  RQLLQIRMLTREIMEKAVRGVFLVEPNVVDKVIFRYQKYYEYTKEQLLRRQQQLMTMRQM 600

Query: 601  XXXXPXXXXXXXXXXXXXXXXXXXXXAMQSXXXXXXXXXXXXXXXXXXXSGVNNNSNMGI 660
                P                     AMQS                   SGVNNNSNMGI
Sbjct: 601  QNNNPNLTANDLLNQQQLLQNRKLNLAMQSQTQEPPQIAAQQQQPQQPISGVNNNSNMGI 660

Query: 661  VLDSSLNATSRSGTNTMEFLNSPEFSAISPAVPSPNKDKKNPATRAVKGKKNSQSGIPTS 720
            VLDSSLNATSRSGTNTMEFLNSPEFSAISPAVPSPNKDKKNPATRAVKGKKNSQSGIPTS
Sbjct: 661  VLDSSLNATSRSGTNTMEFLNSPEFSAISPAVPSPNKDKKNPATRAVKGKKNSQSGIPTS 720

Query: 721  NPQSNSNASVVNSRTATPTVIPGSSPMFNNKSLASGQQNSPSPKTMINSPPQQDNPYKND 780
            NPQSNSNASVVNSRTATPTVIPGSSPMFNNKSLASGQQNSPSPKTMINSPPQQDNPYKND
Sbjct: 721  NPQSNSNASVVNSRTATPTVIPGSSPMFNNKSLASGQQNSPSPKTMINSPPQQDNPYKND 780

Query: 781  ELALKKMAIRTAELMSRYKHRKEVFVMSSIDLFLSTFADCLDIKDDAVDLVHKTPQPILD 840
            ELALKKMAIRTAELMSRYKHRKEVFVMSSIDLFLSTFADCLDIKDDAVDLVHKTPQPILD
Sbjct: 781  ELALKKMAIRTAELMSRYKHRKEVFVMSSIDLFLSTFADCLDIKDDAVDLVHKTPQPILD 840

Query: 841  QINGTGKKKLSKAAQKARDQDPVEISVRNNKLLMPSKSEKTLRSFKIPIADITACFKPFA 900
            QINGTGKKKLSKAAQKARDQDPVEISVRNNKLLMPSKSEKTLRSFKIPIADITACFKPFA
Sbjct: 841  QINGTGKKKLSKAAQKARDQDPVEISVRNNKLLMPSKSEKTLRSFKIPIADITACFKPFA 900

Query: 901  DPKQLILNSTPKHDEKKRKFDDLEISPTDSSSELMSESKKVKFDSPDDMFLNDPSSVQET 960
            DPKQLILNSTPKHDEKKRKFDDLEISPTDSSSELMSESKKVKFDSPDDMFLNDPSSVQET
Sbjct: 901  DPKQLILNSTPKHDEKKRKFDDLEISPTDSSSELMSESKKVKFDSPDDMFLNDPSSVQET 960

Query: 961  KPLVPSELGMYSINSKPSIPSSAGNMPAPNESTDSGMNIWDWNYWESL 1008
            KPLVPSELGMYSINSKPSIPSSAGNMPAPNESTDSGMNIWDWNYWESL
Sbjct: 961  KPLVPSELGMYSINSKPSIPSSAGNMPAPNESTDSGMNIWDWNYWESL 1008
>gi|171550|gb|AAA34622.1| auxiliary activator
          Length = 1081

 Score =  169 bits (427), Expect = 3e-40
 Identities = 131/392 (33%), Positives = 199/392 (50%), Gaps = 52/392 (13%)

Query: 651  GVNNNSNMGIVLDSSLNATSRSGTNTMEFLNSPEFSAISPAVPSPNKDKKNPATRAVKGK 710
            GV N S M     +++   +   T++M+FLNS E +   P   +  +         V G+
Sbjct: 705  GVANYSAMANAPGNNIPYMNHKNTSSMDFLNSMENTPKVPVSAAATQSLNKTINGKVNGR 764

Query: 711  KNSQSGIPTSNPQSNSNASVVNSRTATPTV-----IPGSSPMFNNKSLASGQQN-SPSPK 764
              S +   TS P +N   S+ N+ +  PT         S+P  N   L +  +N +P+P 
Sbjct: 765  TKSNTIPVTSIPSTNKKLSISNAASQQPTPRSASNTAKSTPNTNPSPLKTQTKNGTPNPN 824

Query: 765  TM--INSPPQQ---------DNPYKNDELALKKMAIRTAELMSRYKHRKEVFVMSSIDLF 813
             M  + SP            +N ++ +EL LK + IR  E+ SR+KHR+E+F  S +DLF
Sbjct: 825  NMKTVQSPMGAQPSYNSAIIENAFRKEELLLKDLEIRKLEISSRFKHRQEIFKDSPMDLF 884

Query: 814  LSTFADCLDIKDDAVDLVHKTPQPILDQINGTGKKKLSKAAQKARDQDPVEISVRNNKLL 873
            +ST  DCL IKD+ +      P+ ++D ING+GK+K +KAAQ+ARDQD ++IS+++NKL+
Sbjct: 885  MSTLGDCLGIKDEEMLTSCTIPKAVVDHINGSGKRKPTKAAQRARDQDSIDISIKDNKLV 944

Query: 874  MPSKSEKTLRSFKIPIADITACFK----PFADPKQLI-------LNSTPKHDEKKRKFDD 922
            M SK  K+ RS+ I ++++ A FK     F D   L+        ++    + +KRK   
Sbjct: 945  MKSKFNKSNRSYSIALSNVAAIFKGIGGNFKDLSTLVHSSSPSTSSNMDVGNPRKRKASV 1004

Query: 923  LEISPTDS-------SSELMSESKKVKFDSPDDMFLNDPSSVQETKPLVPSELGMYSINS 975
            LEISP DS        S +MS+SKK+K DSPDD F+    +    K  V         N 
Sbjct: 1005 LEISPQDSIASVLSPDSNIMSDSKKIKVDSPDDPFMTKSGATTSEKQEV--------TNE 1056

Query: 976  KPSIPSSAGNMPAPNESTDSGMNIWDWNYWES 1007
             P + S          ++    N+WDWN W S
Sbjct: 1057 APFLTSG---------TSSEQFNVWDWNNWTS 1079

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 43/110 (39%), Positives = 81/110 (73%)

Query: 472 PTEQDMLALKKLNAEVTKNPVKLNDITNRLTNDQKQQIRSKLHANQQLFSSVESFIPTLY 531
           PT +D+  +K+L+ + +K  ++L D+TN L+N++K++I+ KL   Q+LF  V +F P +Y
Sbjct: 506 PTAKDVEVIKQLSLDASKTNLRLTDVTNSLSNEEKEKIKMKLKQGQKLFVQVSNFAPQVY 565

Query: 532 MLTRNEEHIRQLLQIRMLTREIMEKAVRGVFLVEPNVVDKVIFRYQKYYE 581
           ++T+NE  ++++ Q+R+  +EI+EK   G+F+V+ + VD++I +YQKY+E
Sbjct: 566 IITKNENFLKEVFQLRIFVKEILEKCAEGIFVVKLDTVDRLIIKYQKYWE 615
>gi|6324522|ref|NP_014591.1| Regulates transcription of a diverse array of genes. Required for
            mating and sporulation.; Gal11p [Saccharomyces
            cerevisiae]
 gi|2507028|sp|P19659|GALY_YEAST TRANSCRIPTION REGULATORY PROTEIN GAL11
 gi|2133177|pir||S66736 transcription activator GAL11 - yeast (Saccharomyces cerevisiae)
 gi|1419856|emb|CAA99056.1| ORF YOL051w [Saccharomyces cerevisiae]
          Length = 1081

 Score =  167 bits (424), Expect = 8e-40
 Identities = 131/392 (33%), Positives = 198/392 (50%), Gaps = 52/392 (13%)

Query: 651  GVNNNSNMGIVLDSSLNATSRSGTNTMEFLNSPEFSAISPAVPSPNKDKKNPATRAVKGK 710
            GV N S M     +++   +   T++M+FLNS E +   P   +            V G+
Sbjct: 705  GVANYSAMANAPGNNIPYMNHKNTSSMDFLNSMENTPKVPVSAAATPSLNKTINGKVNGR 764

Query: 711  KNSQSGIPTSNPQSNSNASVVNSRTATPTV-----IPGSSPMFNNKSLASGQQN-SPSPK 764
              S +   TS P +N   S+ N+ +  PT         S+P  N   L +  +N +P+P 
Sbjct: 765  TKSNTIPVTSIPSTNKKLSISNAASQQPTPRSASNTAKSTPNTNPSPLKTQTKNGTPNPN 824

Query: 765  TM--INSPPQQ---------DNPYKNDELALKKMAIRTAELMSRYKHRKEVFVMSSIDLF 813
             M  + SP            +N ++ +EL LK + IR  E+ SR+KHR+E+F  S +DLF
Sbjct: 825  NMKTVQSPMGAQPSYNSAIIENAFRKEELLLKDLEIRKLEISSRFKHRQEIFKDSPMDLF 884

Query: 814  LSTFADCLDIKDDAVDLVHKTPQPILDQINGTGKKKLSKAAQKARDQDPVEISVRNNKLL 873
            +ST  DCL IKD+ +      P+ ++D ING+GK+K +KAAQ+ARDQD ++IS+++NKL+
Sbjct: 885  MSTLGDCLGIKDEEMLTSCTIPKAVVDHINGSGKRKPTKAAQRARDQDSIDISIKDNKLV 944

Query: 874  MPSKSEKTLRSFKIPIADITACFK----PFADPKQLI-------LNSTPKHDEKKRKFDD 922
            M SK  K+ RS+ I ++++ A FK     F D   L+        ++    + +KRK   
Sbjct: 945  MKSKFNKSNRSYSIALSNVAAIFKGIGGNFKDLSTLVHSSSPSTSSNMDVGNPRKRKASV 1004

Query: 923  LEISPTDS-------SSELMSESKKVKFDSPDDMFLNDPSSVQETKPLVPSELGMYSINS 975
            LEISP DS        S +MS+SKK+K DSPDD F+    +    K  V         N 
Sbjct: 1005 LEISPQDSIASVLSPDSNIMSDSKKIKVDSPDDPFMTKSGATTSEKQEV--------TNE 1056

Query: 976  KPSIPSSAGNMPAPNESTDSGMNIWDWNYWES 1007
             P + S          ++    N+WDWN W S
Sbjct: 1057 APFLTSG---------TSSEQFNVWDWNNWTS 1079

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/110 (39%), Positives = 81/110 (73%)

Query: 472 PTEQDMLALKKLNAEVTKNPVKLNDITNRLTNDQKQQIRSKLHANQQLFSSVESFIPTLY 531
           PT +D+  +K+L+ + +K  ++L D+TN L+N++K++I+ KL   Q+LF  V +F P +Y
Sbjct: 506 PTAKDVEVIKQLSLDASKTNLRLTDVTNSLSNEEKEKIKMKLKQGQKLFVQVSNFAPQVY 565

Query: 532 MLTRNEEHIRQLLQIRMLTREIMEKAVRGVFLVEPNVVDKVIFRYQKYYE 581
           ++T+NE  ++++ Q+R+  +EI+EK   G+F+V+ + VD++I +YQKY+E
Sbjct: 566 IITKNENFLKEVFQLRIFVKEILEKCAEGIFVVKLDTVDRLIIKYQKYWE 615
>gi|7493813|pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans)
 gi|3859719|emb|CAA21993.1| possible regulatory protein [Candida albicans]
          Length = 1145

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/117 (35%), Positives = 78/117 (66%)

Query: 469 VPRPTEQDMLALKKLNAEVTKNPVKLNDITNRLTNDQKQQIRSKLHANQQLFSSVESFIP 528
           +P  T++  L L++L  EV++N V L D+T+ L+N  K  +R  ++  Q+ + +V+S I 
Sbjct: 598 LPPLTDEVKLRLRQLIEEVSRNNVVLRDVTSLLSNQDKTTVRDSMNRIQEQYGNVDSIIS 657

Query: 529 TLYMLTRNEEHIRQLLQIRMLTREIMEKAVRGVFLVEPNVVDKVIFRYQKYYEYTKE 585
             Y+LT+N +  ++L+Q++ +T+ I++   RG++L  P++++KV  +Y KY+EY KE
Sbjct: 658 YFYLLTKNGDGTKRLIQMKYMTKNILDNLHRGIYLAGPDLLEKVRSQYAKYFEYVKE 714
>gi|7522544|pir||T39415 probable transcription regulator SPBC146.01 - fission yeast
           (Schizosaccharomyces pombe) (fragment)
 gi|5441483|emb|CAB46754.1| SPBC146.01 [Schizosaccharomyces pombe]
          Length = 445

 Score = 43.9 bits (102), Expect = 0.013
 Identities = 26/81 (32%), Positives = 41/81 (50%)

Query: 504 DQKQQIRSKLHANQQLFSSVESFIPTLYMLTRNEEHIRQLLQIRMLTREIMEKAVRGVFL 563
           DQK  I S + +   +FS     I   Y LT NEE   QL+Q+R + +  +E   +GVF 
Sbjct: 1   DQKVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQGVFT 60

Query: 564 VEPNVVDKVIFRYQKYYEYTK 584
             P  + K+  +  +Y+ + K
Sbjct: 61  CAPQTLAKIKEKTSRYFAFVK 81
>gi|7493771|pir||T18249 conserved hypothetical protein - yeast (Candida albicans)
 gi|3859683|emb|CAA22020.1| conserved hypothetical protein [Candida albicans]
          Length = 1018

 Score = 39.3 bits (90), Expect = 0.32
 Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 3/148 (2%)

Query: 818 ADCLDIKDDAVDLVHKTPQPILDQINGTGKKKLSKAAQKARDQDPVEISVRNNKLLMPSK 877
           AD  D    +VD   +    I+ Q+    + KL K A K RDQD  E  +R + L    +
Sbjct: 768 ADSPDTDTVSVDANGEEKPVIVQQLPRGKRSKLKKIAAKYRDQDEEERKLRMDALGTLKQ 827

Query: 878 SEKTLRSFKIPIADITACFKPFADPKQLILNSTPKHDEKKRKFDDLEISPTDSSSELMSE 937
            E+ L   +I  ++ +   K     K++IL    K  +K+R+     +S  ++  E  +E
Sbjct: 828 VEERLSKTQIENSEKSESVKK-QQQKEVILER--KKKQKERELQKYLLSDDNNDEETDNE 884

Query: 938 SKKVKFDSPDDMFLNDPSSVQETKPLVP 965
           S  V +    D F   PS+      LVP
Sbjct: 885 SHIVNYLEILDSFTAKPSTKDTIVGLVP 912
  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Jun 25, 2003  2:03 AM
  Number of letters in database: 468,613,799
  Number of sequences in database:  1,459,100
  
Lambda     K      H
   0.311    0.128    0.356 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 642,270,806
Number of Sequences: 1459100
Number of extensions: 23037349
Number of successful extensions: 73403
Number of sequences better than  1.0: 100
Number of HSP's better than  1.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 70734
Number of HSP's gapped (non-prelim): 778
length of query: 1008
length of database: 468,613,799
effective HSP length: 134
effective length of query: 874
effective length of database: 273,094,399
effective search space: 238684504726
effective search space used: 238684504726
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 87 (38.1 bits)