Query Fun_Sc_NP_014028.1_Dyn3p Command /cluster/toolkit/production/bioprogs/hhpred/hhsearch -cal -cpu 4 -v 1 -i /cluster/toolkit/production/tmp/production/96189/s_Sc_Dyn3.hhm -d /cluster/toolkit/production/databases/hhpred/new_dbs/scop70_1.71/db/scop.hhm -o /cluster/toolkit/production/tmp/production/96189/s_Sc_Dyn3.hhr -p 20 -P 20 -Z 100 -B 100 -seq 1 -aliw 80 -local -ssm 2 -norealign -sc 1 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1d5ca_ c.37.1.8 (A:) Rab6 {Ma 97.7 0.0021 2E-07 36.7 15.9 152 28-201 4-156 (162) 2 d1oiva_ c.37.1.8 (A:) Rab11a { 97.6 0.002 1.9E-07 36.8 14.7 159 28-211 9-168 (168) 3 d1r2qa_ c.37.1.8 (A:) Rab5a {H 97.5 0.011 1.1E-06 32.4 17.3 168 20-212 1-169 (170) 4 d1wmsa_ c.37.1.8 (A:) Rab9a {H 97.3 0.011 1E-06 32.6 15.5 152 28-202 9-166 (174) 5 d1g16a_ c.37.1.8 (A:) Rab-rela 97.3 0.0024 2.3E-07 36.3 11.4 160 27-213 4-165 (166) 6 d1m7ba_ c.37.1.8 (A:) RhoE (RN 97.2 0.0062 5.9E-07 33.9 12.8 171 28-207 5-178 (179) 7 d1c1ya_ c.37.1.8 (A:) Rap1A {H 97.0 0.03 2.9E-06 30.0 15.0 152 28-201 6-159 (167) 8 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 97.0 0.0066 6.3E-07 33.8 11.5 174 26-206 3-176 (177) 9 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 97.0 0.023 2.2E-06 30.6 14.3 167 24-211 2-168 (170) 10 d1e0sa_ c.37.1.8 (A:) ADP-ribo 96.9 0.014 1.4E-06 31.8 12.8 122 4-147 1-124 (173) 11 d1h65a_ c.37.1.8 (A:) Chloropl 96.9 0.0053 5E-07 34.3 10.0 157 11-175 18-186 (257) 12 d3raba_ c.37.1.8 (A:) Rab3a {R 96.9 0.097 9.3E-06 27.0 16.5 161 28-213 8-169 (169) 13 d1u8za_ c.37.1.8 (A:) Ras-rela 96.8 0.047 4.5E-06 28.8 14.6 161 28-213 7-168 (168) 14 d2ngra_ c.37.1.8 (A:) CDC42 {H 96.8 0.087 8.3E-06 27.3 15.9 167 25-206 3-177 (191) 15 d1ksha_ c.37.1.8 (A:) ADP-ribo 96.8 0.028 2.7E-06 30.2 13.2 113 24-147 1-114 (165) 16 d1i2ma_ c.37.1.8 (A:) Ran {Hum 96.8 0.0038 3.6E-07 35.2 8.7 164 28-219 6-170 (170) 17 d1mh1__ c.37.1.8 (-) Rac {Huma 96.6 0.024 2.3E-06 30.5 11.8 177 23-206 3-179 (183) 18 d1kao__ c.37.1.8 (-) Rap2a {Hu 96.6 0.15 1.5E-05 25.9 15.9 154 27-202 5-159 (167) 19 d1ky3a_ c.37.1.8 (A:) Rab-rela 96.5 0.087 8.3E-06 27.3 14.4 156 28-200 5-163 (175) 20 d1ukvy_ c.37.1.8 (Y:) GTPase Y 96.4 0.13 1.2E-05 26.3 14.5 153 28-202 9-162 (204) 21 d1fzqa_ c.37.1.8 (A:) ADP-ribo 96.3 0.086 8.2E-06 27.3 13.0 119 18-147 9-128 (176) 22 d1udxa2 c.37.1.8 (A:157-336) O 96.1 0.085 8.1E-06 27.3 12.3 174 27-219 3-179 (180) 23 d1moza_ c.37.1.8 (A:) ADP-ribo 96.1 0.046 4.4E-06 28.9 10.8 127 4-147 1-129 (182) 24 d1r8sa_ c.37.1.8 (A:) ADP-ribo 95.9 0.16 1.6E-05 25.7 13.2 110 27-147 2-112 (160) 25 d1svsa1 c.37.1.8 (A:32-60,A:18 95.7 0.09 8.6E-06 27.2 11.0 166 27-207 4-191 (195) 26 d1upta_ c.37.1.8 (A:) ADP-ribo 95.0 0.46 4.4E-05 23.1 12.7 167 22-214 2-169 (169) 27 d1m2ob_ c.37.1.8 (B:) SAR1 {Ba 94.6 0.54 5.2E-05 22.7 12.3 108 28-147 3-112 (167) 28 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 94.2 0.27 2.6E-05 24.4 10.0 109 28-147 16-125 (186) 29 d1f60a3 c.37.1.8 (A:2-240) Elo 94.2 0.17 1.6E-05 25.6 9.0 146 20-179 1-179 (239) 30 d1d2ea3 c.37.1.8 (A:55-250) El 93.8 0.81 7.8E-05 21.6 11.9 144 24-186 2-165 (196) 31 d1exma3 c.37.1.8 (A:3-212) Elo 93.8 0.059 5.7E-06 28.2 6.0 144 21-179 5-160 (210) 32 d1nrjb_ c.37.1.8 (B:) Signal r 93.7 0.29 2.7E-05 24.3 9.4 122 27-155 5-139 (209) 33 d1ctqa_ c.37.1.8 (A:) cH-p21 R 93.7 3.6 0.00034 17.9 15.0 151 28-202 6-158 (166) 34 d1svia_ c.37.1.8 (A:) Probable 93.2 0.99 9.4E-05 21.2 11.5 160 27-205 25-193 (195) 35 d1jnya3 c.37.1.8 (A:4-227) Elo 93.1 0.45 4.3E-05 23.1 9.6 142 24-179 2-178 (224) 36 d1etu_1 c.37.1.8 (5-200) Elong 92.9 0.89 8.5E-05 21.4 10.9 136 21-179 3-157 (196) 37 d1wf3a1 c.37.1.8 (A:3-180) GTP 92.4 0.57 5.5E-05 22.5 9.3 129 22-154 2-133 (178) 38 d1r5ba3 c.37.1.8 (A:215-459) E 91.6 2.1 0.0002 19.2 11.5 143 27-180 26-200 (245) 39 d1mkya1 c.37.1.8 (A:2-172) Pro 89.9 0.63 6E-05 22.3 7.5 122 27-155 2-128 (171) 40 d1puia_ c.37.1.8 (A:) Probable 89.8 9.3 0.00089 15.5 13.4 169 14-202 3-182 (188) 41 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 89.5 1.3 0.00012 20.5 8.9 113 27-147 4-122 (184) 42 d1kk1a3 c.37.1.8 (A:6-200) Ini 88.9 28 0.0027 12.7 15.4 174 20-212 1-195 (195) 43 d1azsc2 c.37.1.8 (C:36-66,C:20 88.8 2.9 0.00027 18.5 10.2 113 24-147 4-125 (223) 44 d1tq4a_ c.37.1.8 (A:) Interfer 87.2 3.3 0.00031 18.1 9.7 157 11-177 42-202 (400) 45 d1g6oa_ c.37.1.11 (A:) Hexamer 87.1 0.95 9.1E-05 21.2 7.0 76 24-106 165-241 (323) 46 d1mkya2 c.37.1.8 (A:173-358) P 86.3 3.6 0.00035 17.9 9.6 162 18-202 1-176 (186) 47 d1rfla_ c.37.1.8 (A:) Probable 86.3 0.39 3.7E-05 23.5 4.6 119 27-151 9-133 (172) 48 d1egaa1 c.37.1.8 (A:4-182) GTP 86.0 32 0.0031 12.4 14.3 168 25-218 5-178 (179) 49 d1okkd2 c.37.1.10 (D:97-303) G 85.7 0.22 2.1E-05 24.9 3.1 24 22-45 3-26 (207) 50 d1wb1a4 c.37.1.8 (A:1-179) Elo 84.4 14 0.0013 14.5 11.8 160 27-210 7-173 (179) 51 d1pzna2 c.37.1.11 (A:96-349) D 79.7 30 0.0029 12.5 12.1 161 15-191 26-193 (254) 52 d1mv5a_ c.37.1.12 (A:) Multidr 79.0 0.79 7.6E-05 21.7 3.8 35 21-57 24-58 (242) 53 d1szpa2 c.37.1.11 (A:145-395) 78.8 57 0.0055 10.9 13.3 153 3-185 19-180 (251) 54 d1vpla_ c.37.1.12 (A:) Putativ 78.4 0.73 7E-05 21.9 3.5 33 23-57 26-58 (238) 55 d1b0ua_ c.37.1.12 (A:) ATP-bin 77.0 0.81 7.7E-05 21.7 3.4 35 21-57 24-58 (258) 56 d1v5wa_ c.37.1.11 (A:) Meiotic 77.0 5.6 0.00054 16.8 7.7 134 12-145 24-186 (258) 57 d1lnza2 c.37.1.8 (A:158-342) O 76.1 4 0.00039 17.6 6.8 178 27-221 3-185 (185) 58 d1fts_2 c.37.1.10 (285-495) GT 74.8 0.99 9.4E-05 21.2 3.4 28 18-45 2-29 (211) 59 d1pf4a1 c.37.1.12 (A:321-564) 74.1 0.56 5.3E-05 22.6 1.9 35 21-57 45-79 (244) 60 d1n0wa_ c.37.1.11 (A:) DNA rep 73.5 5.2 0.0005 16.9 6.8 134 12-145 10-170 (242) 61 d1r0wa_ c.37.1.12 (A:) Cystic 73.1 0.85 8.2E-05 21.5 2.7 35 21-57 58-92 (281) 62 d1jj7a_ c.37.1.12 (A:) Peptide 72.4 1.2 0.00012 20.6 3.3 35 21-57 36-70 (251) 63 d1mt0a_ c.37.1.12 (A:) Haemoly 71.9 0.89 8.5E-05 21.4 2.5 33 23-57 27-59 (241) 64 d1xzpa2 c.37.1.8 (A:212-371) T 71.3 1.1 0.00011 20.8 3.0 112 28-147 3-118 (160) 65 d1sgwa_ c.37.1.12 (A:) Putativ 70.8 1.2 0.00011 20.7 3.0 35 21-57 23-57 (200) 66 d1ji0a_ c.37.1.12 (A:) Branche 70.7 1.3 0.00012 20.6 3.1 35 21-57 28-62 (240) 67 d1v43a3 c.37.1.12 (A:7-245) Hy 68.5 1.4 0.00013 20.3 2.9 35 21-57 28-62 (239) 68 d1q12a2 c.37.1.12 (A:4-235) Ma 67.5 1.7 0.00016 19.8 3.2 35 21-57 22-56 (232) 69 d1l2ta_ c.37.1.12 (A:) MJ0796 67.4 1.8 0.00017 19.6 3.3 35 21-57 27-61 (230) 70 d1oxxk2 c.37.1.12 (K:1-242) Gl 66.2 1.6 0.00015 20.0 2.8 35 21-57 27-61 (242) 71 d1g6ha_ c.37.1.12 (A:) MJ1267 66.0 1.9 0.00018 19.5 3.2 38 18-57 23-60 (254) 72 d1g2912 c.37.1.12 (1:1-240) Ma 60.5 2.4 0.00023 19.0 2.9 32 24-57 28-59 (240) 73 d1p9ra_ c.37.1.11 (A:) Extrace 60.4 8.2 0.00078 15.8 5.6 73 28-106 161-233 (401) 74 d1s4qa_ c.37.1.1 (A:) Guanylat 59.4 2.5 0.00023 18.9 2.8 21 25-45 2-22 (183) 75 d1g41a_ c.37.1.20 (A:) HslU {H 58.7 5.2 0.0005 17.0 4.4 38 5-45 32-69 (443) 76 d1tf7a1 c.37.1.11 (A:14-255) C 57.6 2.5 0.00024 18.8 2.6 31 15-45 16-46 (242) 77 d1ixza_ c.37.1.20 (A:) AAA dom 56.7 3.5 0.00033 18.0 3.2 25 21-45 38-62 (247) 78 d1kgda_ c.37.1.1 (A:) Guanylat 55.6 3.2 0.0003 18.2 2.9 21 25-45 3-23 (178) 79 d1tf7a2 c.37.1.11 (A:256-497) 54.8 2.6 0.00024 18.8 2.3 56 12-70 13-68 (242) 80 d1sxjb2 c.37.1.20 (B:7-230) Re 49.1 26 0.0025 12.9 6.7 143 21-182 32-180 (224) 81 d1dar_2 c.37.1.8 (1-282) Elong 47.9 13 0.0012 14.7 4.9 114 27-147 14-140 (282) 82 d1y63a_ c.37.1.1 (A:) Probable 47.1 5.8 0.00055 16.7 3.1 24 22-45 2-25 (174) 83 d1s96a_ c.37.1.1 (A:) Guanylat 45.0 5.8 0.00056 16.7 2.8 21 25-45 2-22 (205) 84 d1d2na_ c.37.1.20 (A:) Hexamer 43.9 5.9 0.00056 16.7 2.7 27 19-45 34-60 (246) 85 d1e32a2 c.37.1.20 (A:201-458) 43.4 7.3 0.0007 16.1 3.1 24 22-45 35-58 (258) 86 d1l7vc_ c.37.1.12 (C:) ABC tra 41.7 4.1 0.00039 17.6 1.6 28 18-45 18-45 (231) 87 d1lvga_ c.37.1.1 (A:) Guanylat 41.6 6.4 0.00061 16.5 2.6 20 26-45 1-20 (190) 88 d1gky__ c.37.1.1 (-) Guanylate 40.7 7 0.00066 16.2 2.7 21 25-45 1-21 (186) 89 d1cr1a_ c.37.1.11 (A:) Gene 4 39.7 29 0.0027 12.7 5.7 156 22-189 32-197 (277) 90 d1np6a_ c.37.1.10 (A:) Molybdo 39.0 7.1 0.00068 16.2 2.5 18 28-45 5-22 (170) 91 d1t4ga2 c.37.1.11 (A:65-322) D 38.9 7.4 0.0007 16.1 2.6 31 15-45 24-54 (258) 92 d1lw7a2 c.37.1.1 (A:220-411) T 37.2 9.3 0.00089 15.5 2.9 22 24-45 6-27 (192) 93 d1khta_ c.37.1.1 (A:) Adenylat 35.4 10 0.00097 15.3 2.8 21 25-45 1-21 (190) 94 d1nlfa_ c.37.1.11 (A:) Hexamer 35.0 9.2 0.00088 15.5 2.6 24 22-45 26-49 (274) 95 d1ogsa2 c.1.8.3 (A:78-431) Glu 34.4 41 0.0039 11.8 5.8 135 34-179 20-195 (354) 96 d1r7ra3 c.37.1.20 (A:471-735) 34.4 11 0.0011 15.1 2.9 24 22-45 38-61 (265) 97 d1ak2_1 c.37.1.1 (14-146,177-2 34.4 12 0.0011 14.9 3.1 23 23-45 1-23 (190) 98 d1ixsb2 c.37.1.20 (B:4-242) Ho 34.3 19 0.0019 13.6 4.1 43 3-45 13-55 (239) 99 d1fnna2 c.37.1.20 (A:1-276) CD 34.3 16 0.0015 14.2 3.6 54 8-65 26-79 (276) 100 d1ny5a2 c.37.1.20 (A:138-384) 34.2 18 0.0017 13.9 3.9 36 6-45 8-43 (247) No 1 >d1d5ca_ c.37.1.8 (A:) Rab6 {Malaria parasite (Plasmodium falciparum)} Probab=97.72 E-value=0.0021 Score=36.67 Aligned_columns=152 Identities=9% Q ss_pred EEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 89975983317999998514-77865566557502563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFP-EGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~-~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) ++++|..+.||++|++++.. .-.+.+.++.+.++....+... ....++.+|-..+.-.........+-..+ -++ T Consensus 4 i~i~G~~~vGKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~~~~~~d~~g~~~~~~~~~~~~~~~d----~~i 78 (162) T d1d5ca_ 4 LVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLD-EGPVRLQLWDTAGQERFRSLIPSYIRDSA----AAI 78 (162) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCTTCCCCCCCEEEEEEEEET-TEEEEEEEEECCCSGGGGGGHHHHHTTCS----EEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEC-CEEEEEEEECCCCCCHHHHHHHHHHCCCC----EEE T ss_conf 8998179987999999986480156613315546777897308-81699986237652033456677632683----899 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEC Q ss_conf 98516663446899999999998640689987389984773456655324541157889999999999988294158852 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFYIC 186 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiYts 186 (312) ++.|-+ |++.+-..-...-...+.....-+++||+.|+| |+.+.....++...|.+ .+|+..+.+ T Consensus 79 ~v~d~~--~~~s~~~~~~~l~~i~~~~~~~~piilvgnK~D----l~~~~~v~~~~~~~~~~--------~~~~~~~~~- 143 (162) T d1d5ca_ 79 VVYDIT--NRQSFENTTKWIQDILNERGKDVIIALVGNKTD----LGDLRKVTYEEGMQKAQ--------EYNTMFHET- 143 (162) T ss_dssp EEEETT--CHHHHHTHHHHHHHHHHHHTTSSEEEEEEECGG----GGGGCCSCHHHHHHHHH--------HTTCEEEEC- T ss_pred EEEECC--CCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCC----CCCCCCCCHHHHHHHHH--------HCCCEEEEE- T ss_conf 997446--667778999999999751248657899752146----53224548899999999--------649929999- Q ss_pred CCCCHHHHHHHHHHH Q ss_conf 565313555667788 Q Fun_Sc_NP_0140 187 EDHTEEKREEAQRLK 201 (312) Q Consensus 187 ~ts~~~~kn~~~~l~ 201 (312) |++...+-..++. T Consensus 144 --Sa~~g~gv~~lf~ 156 (162) T d1d5ca_ 144 --SAKAGHNIKVLFK 156 (162) T ss_dssp --BTTTTBSCHHHHH T ss_pred --ECCCCCCHHHHHH T ss_conf --7268968789999 No 2 >d1oiva_ c.37.1.8 (A:) Rab11a {Human (Homo sapiens)} Probab=97.63 E-value=0.002 Score=36.79 Aligned_columns=159 Identities=9% Q ss_pred EEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 89975983317999998514-77865566557502563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFP-EGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~-~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) ++++|....||++|++++.. .-.+...+..+..+....+.-+ ....++..|-..|............-..+. ++ T Consensus 9 i~ivG~~~vGKSSLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~D~~g~~~~~~~~~~~~~~~d~----~i 83 (168) T d1oiva_ 9 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-GKTIKAQIWDTAGQERYRAITSAYYRGAVG----AL 83 (168) T ss_dssp EEEESSTTSSHHHHHHHHHHSCCCSSCCCCSSEEEEEEEEEET-TEEEEEEEEEECSCCCCHHHHHHHHTTEEE----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEC-CEEEEEEEECCCCCCHHHHHHHHHHCCCCE----EE T ss_conf 9998369987999999986580343655326533422789988-948999985067830123555776227878----99 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEC Q ss_conf 98516663446899999999998640689987389984773456655324541157889999999999988294158852 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFYIC 186 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiYts 186 (312) ++.|=+..+....+..+...+...+. .+.++++|++|+| |+++.-...++ .|.+|-.+|+..+-+ T Consensus 84 ~v~d~~~~~s~~~i~~~~~~i~~~~~--~~~piiivgnK~D----l~~~~~v~~~~--------~~~~~~~~~~~~~e~- 148 (168) T d1oiva_ 84 LVYDIAKHLTYENVERWLKELRDHAD--SNIVIMLVGNKSD----LRHLRAVPTDE--------ARAFAEKNGLSFIET- 148 (168) T ss_dssp EEEETTCHHHHHTHHHHHHHHHHHSC--TTCEEEEEEECTT----CGGGCCSCHHH--------HHHHHHHHTCEEEEC- T ss_pred EEEEECCCCHHHHHHHHHHHHHHHCC--CCEEEEEEEECCC----HHHCCCCCHHH--------HHHHHHHCCCCEEEE- T ss_conf 99984263016889999999986148--9538996110001----22203779899--------999999639938999- Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCC Q ss_conf 5653135556677888875300124 Q Fun_Sc_NP_0140 187 EDHTEEKREEAQRLKYQELLKHFCE 211 (312) Q Consensus 187 ~ts~~~~kn~~~~l~y~~L~~h~l~ 211 (312) |+++..|-..++.. ++..+| T Consensus 149 --Sak~g~~i~e~f~~---ii~~i~ 168 (168) T d1oiva_ 149 --SALDSTNVEAAFQT---ILTEIY 168 (168) T ss_dssp --CTTTCTTHHHHHHH---HHHHHC T ss_pred --ECCCCCCHHHHHHH---HHHHHC T ss_conf --71689787899999---999709 No 3 >d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens)} Probab=97.51 E-value=0.011 Score=32.40 Aligned_columns=168 Identities=7% Q ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCC Q ss_conf 5536644389975983317999998514-778655665575025633562121332688998607854358878877187 Q Fun_Sc_NP_0140 20 STETATITAIIYSPSSKTLHQFINICFP-EGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQE 98 (312) Q Consensus 20 ~k~~~~k~~lilg~~~~~~~~fi~~l~~-~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~ 98 (312) |...+.-.++++|....||++|++++.. .-.+.+..+...+|....+..+ ....++.+|--.+.-.........+ T Consensus 1 ~~~~~~~ki~liG~~~vGKSsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~~~~i~d~~g~~~~~~~~~~~~--- 76 (170) T d1r2qa_ 1 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLD-DTTVKFEIWDTAGQERYHSLAPMYY--- 76 (170) T ss_dssp CCEEEEEEEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEET-TEEEEEEEEEECCSGGGGGGHHHHH--- T ss_pred CCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEC-CEEEEEEEECCCCCCHHHHHHHHHH--- T ss_conf 986114789998179987999999986480156624420245434545557-9179998730677301123215540--- Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC Q ss_conf 78782799985166634468999999999986406899873899847734566553245411578899999999999882 Q Fun_Sc_NP_0140 99 HSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFN 178 (312) Q Consensus 99 ~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~y 178 (312) ..-.-++++.|-+. +...-..-.-.-...+....+-++++|..|+|-....+-.. +-++.++-.+ T Consensus 77 -~~~~~~i~v~d~~~--~~s~~~~~~~~~~~~~~~~~~~piilVgnK~Dl~~~~~v~~------------~~~~~~~~~~ 141 (170) T d1r2qa_ 77 -RGAQAAIVVYDITN--EESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDF------------QEAQSYADDN 141 (170) T ss_dssp -TTCSEEEEEEETTC--HHHHHHHHHHHHHHHHHSCTTCEEEEEEECGGGGGGCCSCH------------HHHHHHHHHT T ss_pred -CCCCEEEEEEECCC--HHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHCCCCH------------HHHHHHHHHC T ss_conf -46528999962530--14689999999998750378557775320010221047798------------9999999955 Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 9415885256531355566778888753001247 Q Fun_Sc_NP_0140 179 DSSLFYICEDHTEEKREEAQRLKYQELLKHFCED 212 (312) Q Consensus 179 GASLiYts~ts~~~~kn~~~~l~y~~L~~h~l~~ 212 (312) |+..+.+ |++...+-..++.. ++..+++ T Consensus 142 ~~~~~e~---Sa~~~~gi~elf~~---l~~~i~~ 169 (170) T d1r2qa_ 142 SLLFMET---SAKTSMNVNEIFMA---IAKKLPK 169 (170) T ss_dssp TCEEEEC---CTTTCTTHHHHHHH---HHHTSCC T ss_pred CCEEEEE---ECCCCCCHHHHHHH---HHHHHCC T ss_conf 9818998---62689788899999---9998325 No 4 >d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens)} Probab=97.35 E-value=0.011 Score=32.55 Aligned_columns=152 Identities=9% Q ss_pred EEEECCCCHHHHHHHHHHCCCC-CCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 8997598331799999851477-865566557502563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFPEG-SNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~~~-~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) ++|+|....||++|++++..+. .+.+.++.+..|....+.-+ ....++.+|-..+...........+-.++ .++ T Consensus 9 ivivG~~~vGKTsLi~~~~~~~~~~~~~~t~~~~~~~~~i~~~-~~~i~l~~~d~~~~~~~~~~~~~~~~~~d----~~i 83 (174) T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVD-GHFVTMQIWDTAGQERFRSLRTPFYRGSD----CCL 83 (174) T ss_dssp EEEECCTTSSHHHHHHHHHHSCCCC----CCSEEEEEEEEEET-TEEEEEEEEECCCCGGGHHHHGGGGTTCS----EEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECEEEEEEEEC-CEEEEEEEEECCCCCHHHHHHHEECCCCE----EEE T ss_conf 9998179987899999986381356533315511056799998-97999998312473001021100126865----899 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCC-----CCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCE Q ss_conf 985166634468999999999986406-----899873899847734566553245411578899999999999882941 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIKQL-----NDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSS 181 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~~l-----~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGAS 181 (312) ++.|-+. +++.-+ +..|...+++. ..+.++++|+.|+| |+.+. ...++ ++.++-++|.. T Consensus 84 ~v~d~~~--~~s~~~-i~~~~~~i~~~~~~~~~~~~piiivgnK~D----l~~~~--v~~ee-------~~~~~~~~~~~ 147 (174) T d1wmsa_ 84 LTFSVDD--SQSFQN-LSNWKKEFIYYADVKEPESFPFVILGNKID----ISERQ--VSTEE-------AQAWCRDNGDY 147 (174) T ss_dssp EEEETTC--HHHHHT-HHHHHHHHHHHHTCSCTTTSCEEEEEECTT----CSSCS--SCHHH-------HHHHHHHTTCC T ss_pred EEEECCC--HHHHHH-HHHHHHHHHHHHCCCCCCCCCEEEEECCCC----CCCCC--CCHHH-------HHHHHHHCCCC T ss_conf 9863588--678999-989999999871003678852899951457----54355--69899-------99999970798 Q ss_pred EEEECCCCCHHHHHHHHHHHH Q ss_conf 588525653135556677888 Q Fun_Sc_NP_0140 182 LFYICEDHTEEKREEAQRLKY 202 (312) Q Consensus 182 LiYts~ts~~~~kn~~~~l~y 202 (312) .+|- +|++...|-...+.. T Consensus 148 ~~~e--~Sak~~~~I~e~f~~ 166 (174) T d1wmsa_ 148 PYFE--TSAKDATNVAAAFEE 166 (174) T ss_dssp CEEE--CCTTTCTTHHHHHHH T ss_pred CEEE--EECCCCCCHHHHHHH T ss_conf 2799--860589888899999 No 5 >d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae)} Probab=97.27 E-value=0.0024 Score=36.31 Aligned_columns=160 Identities=9% Q ss_pred EEEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEE Q ss_conf 389975983317999998514-7786556655750256335621213326889986078543588788771877878279 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFP-EGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRW 105 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~-~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~ 105 (312) .++++|..+.||++|++++.. .-.+.+.++.+.+|....+..+ ....++..|-..+.-......-..+ ..-..+ T Consensus 4 Ki~ivG~~~vGKTsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~d~~g~~~~~~~~~~~~----~~~d~~ 78 (166) T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN-GKKVKLQIWDTAGQERFRTITTAYY----RGAMGI 78 (166) T ss_dssp EEEEEESTTSSHHHHHHHHHHCCCCC-------CCEEEEEEESS-SCEEEEEEECCTTGGGTSCCCHHHH----TTEEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEC-CCCEEEEEEECCCCCCCCCHHHHHC----CCCCEE T ss_conf 89998079987999999986480077624454114688899875-8413688720578320000124332----699689 Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHCCC-CCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE Q ss_conf 99851666344689999999999864068-99873899847734566553245411578899999999999882941588 Q Fun_Sc_NP_0140 106 LILLDWTLNDQKLWLNELSYAFNKIKQLN-DDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFY 184 (312) Q Consensus 106 ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~-~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiY 184 (312) ++..|-+ |+..+-.. +.|...++... .+-+++|+..|+| |++.. ...++ ++.++-.+|...+- T Consensus 79 i~v~d~~--~~~s~~~~-~~~~~~i~~~~~~~~piivv~nK~D----l~~~~-v~~~e--------~~~~~~~~~~~~~e 142 (166) T d1g16a_ 79 ILVYDIT--DERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSD----METRV-VTADQ--------GEALAKELGIPFIE 142 (166) T ss_dssp EEEEETT--CHHHHHTH-HHHHHHHHHHSCTTCEEEEEEECTT----CTTCC-SCHHH--------HHHHHHHHTCCEEE T ss_pred EEEEECC--CCCHHHHH-HHHHHHHHHCCCCCCCEEEEEECHH----HHHCC-CCHHH--------HHHHHHHCCCCEEE T ss_conf 9998515--65338899-9999998612689851666763102----22006-75889--------99999965993999 Q ss_pred ECCCCCHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 52565313555667788887530012477 Q Fun_Sc_NP_0140 185 ICEDHTEEKREEAQRLKYQELLKHFCEDR 213 (312) Q Consensus 185 ts~ts~~~~kn~~~~l~y~~L~~h~l~~~ 213 (312) + |++...+-..++.. +++.++.+ T Consensus 143 ~---Sa~~g~gv~~lf~~---l~~~i~~~ 165 (166) T d1g16a_ 143 S---SAKNDDNVNEIFFT---LAKLIQEK 165 (166) T ss_dssp C---BTTTTBSHHHHHHH---HHHHHHHT T ss_pred E---ECCCCCCHHHHHHH---HHHHHHHH T ss_conf 9---61589888899999---99999970 No 6 >d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus)} Probab=97.19 E-value=0.0062 Score=33.95 Aligned_columns=171 Identities=6% Q ss_pred EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCE-EEEEEEEECCCHHHHHHHHHHHCCCC-CCCEE Q ss_conf 89975983317999998514778655665575025633562121332-68899860785435887887718778-78279 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENY-SVDVYTLIRNTDDALDLLKPFLQEHS-SKVRW 105 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~-R~~vy~L~~~~~~~~~LLkp~L~~~s-~~~l~ 105 (312) ++++|+.+.||++|+.++ -+.+.+.+..+-........-...+.. ++.+|-..|..... .+....- .-..+ T Consensus 5 I~iiG~~~vGKTsli~~~--~~~~f~~~~~~t~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~-----~~~~~~~~~~d~~ 77 (179) T d1m7ba_ 5 IVVVGDSQCGKTALLHVF--AKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYD-----NVRPLSYPDSDAV 77 (179) T ss_dssp EEEEESTTSSHHHHHHHH--HHSCCCSSCCCCSEEEEEEEEECSSCEEEEEEEEECCSGGGT-----TTGGGGCTTCSEE T ss_pred EEEEECCCCCHHHHHHHH--HCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCC-----HHHHHHHCCCCEE T ss_conf 999706998789999998--628236663433676213432013311026861144321000-----0005663278657 Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 99851666344689999999999864068998738998477345665532454115788999999999998829415885 Q Fun_Sc_NP_0140 106 LILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFYI 185 (312) Q Consensus 106 ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiYt 185 (312) |+.-|.+ |+..+-.....|...++....+.++++|+.|+|--..-......-....-..-..-.+.++-.+|+..++- T Consensus 78 iivydv~--~~~Sf~~i~~~~~~~~~~~~~~~piilvgnK~DL~~~~~~~~~~~~~~~~~Vs~~e~~~la~~~~~~~y~E 155 (179) T d1m7ba_ 78 LICFDIS--RPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIE 155 (179) T ss_dssp EEEEETT--CHHHHHHHHHTHHHHHHHHCTTCEEEEEEECGGGGGCHHHHHHHHTTTCCCCCHHHHHHHHHHHTCSEEEE T ss_pred EEEEECC--CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEE T ss_conf 9998068--60357889887777776402674157875266632103456654430376589899999999708952898 Q ss_pred CCCCCHHH-HHHHHHHHHHHHHH Q ss_conf 25653135-55667788887530 Q Fun_Sc_NP_0140 186 CEDHTEEK-REEAQRLKYQELLK 207 (312) Q Consensus 186 s~ts~~~~-kn~~~~l~y~~L~~ 207 (312) |.....++ -+..-...-.+.+. T Consensus 156 ~SA~t~~n~v~~~F~~~~~~~~~ 178 (179) T d1m7ba_ 156 CSALQSENSVRDIFHVATLACVN 178 (179) T ss_dssp CBTTTBHHHHHHHHHHHHHHHHT T ss_pred EEECCCCCHHHHHHHHHHHHHHC T ss_conf 75036884089999999999843 No 7 >d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens)} Probab=97.03 E-value=0.03 Score=29.97 Aligned_columns=152 Identities=5% Q ss_pred EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCE-EEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 89975983317999998514778655665575025633562121332-68899860785435887887718778782799 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENY-SVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~-R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) ++++|..+.||++|++++ -+.+.+.+..+-........-...... .+.+|-..|.-....-.-.++-.++ .++ T Consensus 6 i~iiG~~~vGKTsLi~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~D~~g~~~~~~~~~~~~~~~~----~~i 79 (167) T d1c1ya_ 6 LVVLGSGGVGKSALTVQF--VQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQ----GFA 79 (167) T ss_dssp EEEECSTTSSHHHHHHHH--HHCCCCCSCCCCSEEEEEEEEESSSCEEEEEEEEECSSCSSTTHHHHHHHHCS----EEE T ss_pred EEEEECCCCCHHHHHHHH--HCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHCCCC----EEE T ss_conf 999817998789999998--62733554564002026889987141456777622566302355576506886----899 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHC-CCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 98516663446899999999998640-68998738998477345665532454115788999999999998829415885 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIKQ-LNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFYI 185 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~~-l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiYt 185 (312) ++.|.+ |+..|-....-|-...+. ...+.++++|+.|+| |.++.....++--.|.+++ -++..|-+ T Consensus 80 ~v~d~~--~~~s~~~~~~~~~~~~~~~~~~~~piilvgnK~D----l~~~~~v~~~e~~~~~~~~-------~~~~~~e~ 146 (167) T d1c1ya_ 80 LVYSIT--AQSTFNDLQDLREQILRVKDTEDVPMILVGNKCD----LEDERVVGKEQGQNLARQW-------CNCAFLES 146 (167) T ss_dssp EEEETT--CHHHHHTHHHHHHHHHHHHCCSCCCEEEEEECTT----CGGGCCSCHHHHHHHHHHT-------TSCEEEEC T ss_pred EEECCC--CCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCC----CCCCCCCCHHHHHHHHHHH-------CCCEEEEE T ss_conf 983067--6642688999999999750689708999850478----0001478989999999984-------49707888 Q ss_pred CCCCCHHHHHHHHHHH Q ss_conf 2565313555667788 Q Fun_Sc_NP_0140 186 CEDHTEEKREEAQRLK 201 (312) Q Consensus 186 s~ts~~~~kn~~~~l~ 201 (312) |++...|-..++. T Consensus 147 ---Sak~~~~v~elf~ 159 (167) T d1c1ya_ 147 ---SAKSKINVNEIFY 159 (167) T ss_dssp ---BTTTTBSHHHHHH T ss_pred ---ECCCCCCHHHHHH T ss_conf ---5058988889999 No 8 >d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens)} Probab=97.00 E-value=0.0066 Score=33.77 Aligned_columns=174 Identities=9% Q ss_pred CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEE Q ss_conf 43899759833179999985147786556655750256335621213326889986078543588788771877878279 Q Fun_Sc_NP_0140 26 ITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRW 105 (312) Q Consensus 26 k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~ 105 (312) +-++++|..+.||++|+.++....................+.-+ .....+.+|-..+.... ..+.+.--...- T Consensus 3 ~KI~iiG~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~~~i~~~-~~~~~~~i~D~~g~~~~------~~~~~~~~~~~~ 75 (177) T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVD-GKQVELALWDTAGLEDY------DRLRPLSYPDTD 75 (177) T ss_dssp EEEEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEEEEEEET-TEEEEEEEEEECCSGGG------TTTGGGGCTTCS T ss_pred EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEC-CCEEEEEEEECCCCCCC------CCCHHCCCCCCC T ss_conf 58999826998799999998627335653550355678998645-93676678534775322------311000110455 Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 99851666344689999999999864068998738998477345665532454115788999999999998829415885 Q Fun_Sc_NP_0140 106 LILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFYI 185 (312) Q Consensus 106 ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiYt 185 (312) ++++=+...|+..+-...+.|...++....+.++++|+.|+|-...-+-+...-....-..-.+..+.++-++|.--++- T Consensus 76 ~~ilv~d~~~~~sf~~~~~~~~~~~~~~~~~~piiivgnK~Dl~~~~~~~~~~~~~~~~~i~~~~~~~~a~~~~~~~~~e 155 (177) T d1kmqa_ 76 VILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYME 155 (177) T ss_dssp EEEEEEETTCHHHHHHHHHTHHHHHHHHSTTSCEEEEEECGGGTTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSEEEE T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEE T ss_conf 48999807854579999876689986327970899986056755330256888865224689899999999728942798 Q ss_pred CCCCCHHHHHHHHHHHHHHHH Q ss_conf 256531355566778888753 Q Fun_Sc_NP_0140 186 CEDHTEEKREEAQRLKYQELL 206 (312) Q Consensus 186 s~ts~~~~kn~~~~l~y~~L~ 206 (312) +.......-+++.-..-++.+ T Consensus 156 ~Sak~~~gv~e~f~~~~~~~l 176 (177) T d1kmqa_ 156 CSAKTKDGVREVFEMATRAAL 176 (177) T ss_dssp CCTTTCTTHHHHHHHHHHHHH T ss_pred EEECCCCCHHHHHHHHHHHHC T ss_conf 750588788899999999970 No 9 >d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae)} Probab=97.00 E-value=0.023 Score=30.62 Aligned_columns=167 Identities=7% Q ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCC Q ss_conf 64438997598331799999851477865566557502563356212133268899860785435887887718778782 Q Fun_Sc_NP_0140 24 ATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKV 103 (312) Q Consensus 24 ~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~ 103 (312) ++..++++|....||++|++++ -+........+....-.....-.-+...+.+.+.+.+..+.............. T Consensus 2 ~~iki~ivG~~~vGKSsLi~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~-- 77 (170) T d1ek0a_ 2 TSIKLVLLGEAAVGKSSIVLRF--VSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQ-- 77 (170) T ss_dssp EEEEEEEECSTTSSHHHHHHHH--HHSCCCTTCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGHHHHHTTCS-- T ss_pred CEEEEEEEECCCCCHHHHHHHH--HCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCC-- T ss_conf 7068999807998899999998--668101241343313665676665470279986237651455555577774120-- Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEE Q ss_conf 79998516663446899999999998640689987389984773456655324541157889999999999988294158 Q Fun_Sc_NP_0140 104 RWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLF 183 (312) Q Consensus 104 l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLi 183 (312) ++++-+...|+...-..-..+.........+.++++|+.++|.+..-..... ..+-.+.++-..|+..+ T Consensus 78 --~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiv~nK~Dl~~~~~~~~i---------~~~~~~~~~~~~~~~~~ 146 (170) T d1ek0a_ 78 --AALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKV---------AREEGEKLAEEKGLLFF 146 (170) T ss_dssp --EEEEEEETTCHHHHHHHHHHHHHHHHHSCTTCEEEEEEECGGGGGSSCCCCS---------CHHHHHHHHHHHTCEEE T ss_pred --EEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCH---------HHHHHHHHHHHCCCEEE T ss_conf --4577764112233678999988875321024311010000001221011220---------08999999996498499 Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHCCC Q ss_conf 8525653135556677888875300124 Q Fun_Sc_NP_0140 184 YICEDHTEEKREEAQRLKYQELLKHFCE 211 (312) Q Consensus 184 Yts~ts~~~~kn~~~~l~y~~L~~h~l~ 211 (312) .+ |++...|-..++.. ++..+. T Consensus 147 ~~---Sa~~g~gI~elf~~---i~~~ip 168 (170) T d1ek0a_ 147 ET---SAKTGENVNDVFLG---IGEKIP 168 (170) T ss_dssp EC---CTTTCTTHHHHHHH---HHTTSC T ss_pred EE---ECCCCCCHHHHHHH---HHHHCC T ss_conf 98---62688788899999---998568 No 10 >d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6} Probab=96.94 E-value=0.014 Score=31.81 Aligned_columns=122 Identities=11% Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEC Q ss_conf 13889988641011465536644389975983317999998514778655665575025633562121332688998607 Q Fun_Sc_NP_0140 4 CNAWDKLLSQNESTINSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIR 83 (312) Q Consensus 4 ~NlWs~iLse~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~ 83 (312) |-+|+++- --..-.++++|....||++|+.++ -+.++.......++-...+..+ +.++.+|-+.| T Consensus 1 ~~~~~~~~----------~~k~~ki~iiG~~~vGKSsll~~~--~~~~~~~~~~t~~~~~~~i~~~---~~~~~l~D~~g 65 (173) T d1e0sa_ 1 GKVLSKIF----------GNKEMRILMLGLDAAGKTTILYKL--KLGQSVTTIPTVGFNVETVTYK---NVKFNVWDVGG 65 (173) T ss_dssp CHHHHHHH----------TTCCEEEEEEEETTSSHHHHHHHT--TCCCCEEEEEETTEEEEEEEET---TEEEEEEEESC T ss_pred CCCCHHHH----------CCCCEEEEEEECCCCCHHHHHHHH--HCCCCCCEECCEEEEEEEEEEE---EEEEEEEECCC T ss_conf 94002452----------787158999817998799999998--5385430220204899984003---69999864474 Q ss_pred CCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH--HCCCCCCCEEEEEECCC Q ss_conf 85435887887718778782799985166634468999999999986--40689987389984773 Q Fun_Sc_NP_0140 84 NTDDALDLLKPFLQEHSSKVRWLILLDWTLNDQKLWLNELSYAFNKI--KQLNDDNEFSVWCLNSG 147 (312) Q Consensus 84 ~~~~~~~LLkp~L~~~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L--~~l~~Dt~i~VVc~~sD 147 (312) . ..+..+.+..++.-. .++++.|-+ |+.. ...+..|+..+ .....+.+++||+.|+| T Consensus 66 ~-~~~~~~~~~~~~~~d---~ii~v~d~~--~~~s-~~~~~~~l~~i~~~~~~~~~piiiv~NK~D 124 (173) T d1e0sa_ 66 Q-DKIRPLWRHYYTGTQ---GLIFVVDCA--DRDR-IDEARQELHRIINDREMRDAIILIFANKQD 124 (173) T ss_dssp C-GGGHHHHGGGTTTCC---EEEEEEETT--CGGG-HHHHHHHHHHHHTSGGGTTCEEEEEEECTT T ss_pred C-HHHHHHHHHHCCCCC---EEEEEEECC--CCCC-HHHHHHHHHHHHHHHCCCCCEEEEEEECCC T ss_conf 1-156889998505886---899999738--8313-789999999998641379854899864058 No 11 >d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum)} Probab=96.86 E-value=0.0053 Score=34.34 Aligned_columns=157 Identities=15% Q ss_pred HHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCC----- Q ss_conf 864101146553664438997598331799999851477865566557502563356212133268899860785----- Q Fun_Sc_NP_0140 11 LSQNESTINSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNT----- 85 (312) Q Consensus 11 Lse~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~----- 85 (312) |-+.-.....+.....+++++|.++.||+++++.+..+..-.+....+ .+.....-....-...+-+.+.|. T Consensus 18 l~~~l~~~k~~~~~~l~I~liG~~g~GKSSliN~ilg~~~~~~s~~~~---~T~~~~~~~~~~~g~~i~vIDTPG~~~~~ 94 (257) T d1h65a_ 18 LLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQS---EGPRPVMVSRSRAGFTLNIIDTPGLIEGG 94 (257) T ss_dssp HHHHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHHTSCCSCCCSSSC---CCSSCEEEEEEETTEEEEEEECCCSEETT T ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCC---CCEEEEEEEEECCCEEEEEEECCCCCCCC T ss_conf 999998643203377679997068984899988874674203337888---51003889973187589998668877721 Q ss_pred ---HHHHHHHHHHHCCCC-CCCEEEEEEC---CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCC Q ss_conf ---435887887718778-7827999851---666344689999999999864068998738998477345665532454 Q Fun_Sc_NP_0140 86 ---DDALDLLKPFLQEHS-SKVRWLILLD---WTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTV 158 (312) Q Consensus 86 ---~~~~~LLkp~L~~~s-~~~l~ViLLD---Ws~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~ 158 (312) .......+-++.... .=.++|+-+| |+.+| +.+-+.+..+-..+.-.+++||.+++|.+..-+..--. T Consensus 95 ~~~~~~~~~i~~~l~~~~~d~iLlVi~~~~~r~~~~d-----~~~~~~i~~~fg~~~~~~~IiV~tk~D~~~~d~~~~e~ 169 (257) T d1h65a_ 95 YINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLD-----KLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDE 169 (257) T ss_dssp EECHHHHHHHHHHTTTCEECEEEEEEESSCCCCCHHH-----HHHHHHHHHHHCGGGGGGEEEEEECCSCCCGGGCCHHH T ss_pred CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHH-----HHHHHHHHHHCCHHHHCCEEEEEECCCCCCCCCCCHHH T ss_conf 3408999999998617999289999847986238899-----99999999840744435889999732247756787899 Q ss_pred CCHHHHHHHHHHHHHHH Q ss_conf 11578899999999999 Q Fun_Sc_NP_0140 159 WQSVHIDFILQTLRSFC 175 (312) Q Consensus 159 w~de~fDfIqQ~LRtvc 175 (312) |..++-+.++++++..+ T Consensus 170 ~~~~~~~~L~~~i~~~~ 186 (257) T d1h65a_ 170 FFSKRSEALLQVVRSGA 186 (257) T ss_dssp HHHHHHHHHHHHHHHHT T ss_pred HHHHHHHHHHHHHHHHH T ss_conf 99877898999999985 No 12 >d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus)} Probab=96.86 E-value=0.097 Score=27.00 Aligned_columns=161 Identities=9% Q ss_pred EEEECCCCHHHHHHHHHHCCCC-CCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 8997598331799999851477-865566557502563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFPEG-SNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~~~-~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) ++++|....||++|++++.... .+.+..+.+..+....+..+ .....+..|...+...... .-.........++ T Consensus 8 I~ivG~~~vGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~~----~~~~~~~~~~~~i 82 (169) T d3raba_ 8 ILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRN-DKRIKLQIWDTAGQERYRT----ITTAYYRGAMGFI 82 (169) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEEET-TEEEEEEEEEECCSGGGHH----HHHTTTTTCCEEE T ss_pred EEEEECCCCCHHHHHHHHHCCEECCCCCCCCCCCEEEEEEEEC-CCEEEEEEECCCCCCHHHH----HHHHHHHHHEEEE T ss_conf 8998369987999999985680034521123421136777645-8203678721676302334----5444321110113 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEC Q ss_conf 98516663446899999999998640689987389984773456655324541157889999999999988294158852 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFYIC 186 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiYts 186 (312) +..|-+. +..+-...+.+-...+......++++|+.|+| +.++.....++. +.++-.+|+..+.+ T Consensus 83 ~v~d~~~--~~s~~~~~~~~~~i~~~~~~~~pii~v~nK~D----~~~~~~~~~~~~--------~~~~~~~~~~~~e~- 147 (169) T d3raba_ 83 LMYDITN--EESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD----MEDERVVSSERG--------RQLADHLGFEFFEA- 147 (169) T ss_dssp EEEETTC--HHHHHTHHHHHHHHHHHCCSCCEEEEEEECTT----CGGGCCSCHHHH--------HHHHHHHTCEEEEC- T ss_pred EEEECCC--CCHHHHHHHHHHHHHHCCCCCCEEEEHHHHCC----HHHHCCCCHHHH--------HHHHHHCCCEEEEE- T ss_conf 3320222--21034556665553210137732685012124----133004428999--------99999649808998- Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 565313555667788887530012477 Q Fun_Sc_NP_0140 187 EDHTEEKREEAQRLKYQELLKHFCEDR 213 (312) Q Consensus 187 ~ts~~~~kn~~~~l~y~~L~~h~l~~~ 213 (312) |++...+-..++.. ++.....+ T Consensus 148 --Sa~~~~gi~e~f~~---l~~~i~~k 169 (169) T d3raba_ 148 --SAKDNINVKQTFER---LVDVICEK 169 (169) T ss_dssp --BTTTTBSHHHHHHH---HHHHHHTC T ss_pred --ECCCCCCHHHHHHH---HHHHHHCC T ss_conf --62689888899999---99998509 No 13 >d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus)} Probab=96.81 E-value=0.047 Score=28.84 Aligned_columns=161 Identities=9% Q ss_pred EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEE Q ss_conf 89975983317999998514778655665575025633562121332688998607854358878877187787827999 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWLI 107 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~Vi 107 (312) ++++|..+.|||+|++++ .+.+.+....+-.-......-. -++.++.+.+.+.+..+..+.+.+..-..+. .+++ T Consensus 7 i~iiG~~~vGKTsli~~~--~~~~~~~~~~~t~~~~~~~~~~-~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~d--~~i~ 81 (168) T d1u8za_ 7 VIMVGSGGVGKSALTLQF--MYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGQEDYAAIRDNYFRSGE--GFLC 81 (168) T ss_dssp EEEECSTTSSHHHHHHHH--HHSCCCSCCCTTCCEEEEEEEE-ETTEEEEEEEEECCC---CHHHHHHHHHHCS--EEEE T ss_pred EEEEECCCCCHHHHHHHH--HCCCCCCCCCCCEEEEEEEEEE-EEEEEEEEEEEECCCCCCCCCCHHHHCCCCC--EEEE T ss_conf 999827998789999998--6483267724532678899999-8116875478742356420100010002442--7999 Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHCCCCC-CCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEC Q ss_conf 85166634468999999999986406899-87389984773456655324541157889999999999988294158852 Q Fun_Sc_NP_0140 108 LLDWTLNDQKLWLNELSYAFNKIKQLNDD-NEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFYIC 186 (312) Q Consensus 108 LLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~D-t~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiYts 186 (312) +.|-+ |+..+-.....+...++..... .++++|+.|+|--..-+-. .+-++.++-.+|...+-+ T Consensus 82 v~d~~--~~~s~~~i~~~~~~~~~~~~~~~~piiiv~nK~Dl~~~~~v~------------~~~~~~~~~~~~~~~~e~- 146 (168) T d1u8za_ 82 VFSIT--EMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVS------------VEEAKNRADQWNVNYVET- 146 (168) T ss_dssp EEETT--CHHHHHHHHHHHHHHHHHHCCTTSCEEEEEECGGGGGGCCSC------------HHHHHHHHHHHTCEEEEC- T ss_pred EEEEC--CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCC------------HHHHHHHHHHCCCCEEEE- T ss_conf 98614--732168999888999853079993899995056700115778------------899999999649958999- Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 565313555667788887530012477 Q Fun_Sc_NP_0140 187 EDHTEEKREEAQRLKYQELLKHFCEDR 213 (312) Q Consensus 187 ~ts~~~~kn~~~~l~y~~L~~h~l~~~ 213 (312) |++...|-..++.. ++..+..+ T Consensus 147 --Sak~~~~i~e~f~~---l~~~i~~~ 168 (168) T d1u8za_ 147 --SAKTRANVDKVFFD---LMREIRAR 168 (168) T ss_dssp --CTTTCTTHHHHHHH---HHHHHHTC T ss_pred --ECCCCCCHHHHHHH---HHHHHHCC T ss_conf --72589888899999---99999609 No 14 >d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens)} Probab=96.81 E-value=0.087 Score=27.28 Aligned_columns=167 Identities=11% Q ss_pred CCEEEEECCCCHHHHHHHHHHCCCC-CCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCC-CC Q ss_conf 4438997598331799999851477-865566557502563356212133268899860785435887887718778-78 Q Fun_Sc_NP_0140 25 TITAIIYSPSSKTLHQFINICFPEG-SNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHS-SK 102 (312) Q Consensus 25 ~k~~lilg~~~~~~~~fi~~l~~~~-~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s-~~ 102 (312) +..++++|+.+.||++|+.++.... .+.+....+..| ...+.-+ ....++.+|-..+..... .+....- .- T Consensus 3 tiKi~iiG~~~vGKSsli~~~~~~~f~~~~~~t~~~~~-~~~~~~~-~~~i~~~i~D~~g~~~~~-----~~~~~~~~~~ 75 (191) T d2ngra_ 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIG-GEPYTLGLFDTAGQEDYD-----RLRPLSYPQT 75 (191) T ss_dssp EEEEEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEE-EEEEEET-TEEEEEEEEEECCSGGGT-----TTGGGGCTTC T ss_pred EEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEE-EEEEEEC-CEEEEEEEECCCCCCHHH-----HHHHHHCCCC T ss_conf 58899980799778999999871854665355202335-7787626-647999973146762144-----6645420552 Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC------HHHHHHHCCCCCCHHHHHHHHHHHHHHHH Q ss_conf 279998516663446899999999998640689987389984773------45665532454115788999999999998 Q Fun_Sc_NP_0140 103 VRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSG------EILNLQRHTTVWQSVHIDFILQTLRSFCY 176 (312) Q Consensus 103 ~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD------~i~~LEKe~~~w~de~fDfIqQ~LRtvcL 176 (312) ..++++.|-+ |+..+-+.-..|...++....+.++++|+.|+| ....+.++. .+.-..+-++|+-+. T Consensus 76 ~~~ilv~d~~--~~~Sf~~~~~~~~~~~~~~~~~ipiilvgnK~Dl~~~~~~~~~~~~~~--~r~v~~~~~~~~a~~--- 148 (191) T d2ngra_ 76 DVFLVCFSVV--SPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNK--QKPITPETAEKLARD--- 148 (191) T ss_dssp SEEEEEEETT--CHHHHHHHHHTHHHHHHHHCTTCCEEEEEECGGGGGCHHHHHHHHTTT--CCCCCHHHHHHHHHH--- T ss_pred EEEEEEEECC--CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCC--CCCCCHHHHHHHHHH--- T ss_conf 7899987146--855899988877888752378743899740524332202678887404--677677899999998--- Q ss_pred HCCCEEEEECCCCCHHHHHHHHHHHHHHHH Q ss_conf 829415885256531355566778888753 Q Fun_Sc_NP_0140 177 FNDSSLFYICEDHTEEKREEAQRLKYQELL 206 (312) Q Consensus 177 ~yGASLiYts~ts~~~~kn~~~~l~y~~L~ 206 (312) +|+.-++-+.+...+.-+++.-......+ T Consensus 149 -~~~~~~~E~SA~tg~gI~e~f~~~i~~~l 177 (191) T d2ngra_ 149 -LKAVKYVECSALTQKGLKNVFDEAILAAL 177 (191) T ss_dssp -TTCSCEEECCTTTCTTHHHHHHHHHHHHT T ss_pred -CCCCEEEEEECCCCCCHHHHHHHHHHHHH T ss_conf -08970899860478777899999999985 No 15 >d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2} Probab=96.78 E-value=0.028 Score=30.16 Aligned_columns=113 Identities=6% Q ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCC Q ss_conf 64438997598331799999851477865566557502563356212133268899860785435887887718778782 Q Fun_Sc_NP_0140 24 ATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKV 103 (312) Q Consensus 24 ~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~ 103 (312) .+..++++|....||++|++++..+....+-...+..+..+.. ++.++.+|-..| ...+-...+.+++.- . T Consensus 1 k~~ki~i~G~~~~GKTsLl~~l~~~~~~~~~~t~~~~~~~i~~-----~~~~~~l~D~~G-~~~~~~~~~~~~~~~---d 71 (165) T d1ksha_ 1 RELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEH-----RGFKLNIWDVGG-QKSLRSYWRNYFEST---D 71 (165) T ss_dssp CCEEEEEECSTTSSHHHHHHHHTTCCCSSCCCCSSEEEEEEEE-----TTEEEEEEEECC-SHHHHTTGGGGCTTC---S T ss_pred CEEEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEEEEECC-----CEEEEEEECCCC-CHHHHHHHHHHHCCC---C T ss_conf 9178999817999899999998378204665578755653058-----358999840675-102233578873222---0 Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHC-CCCCCCEEEEEECCC Q ss_conf 79998516663446899999999998640-689987389984773 Q Fun_Sc_NP_0140 104 RWLILLDWTLNDQKLWLNELSYAFNKIKQ-LNDDNEFSVWCLNSG 147 (312) Q Consensus 104 l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~-l~~Dt~i~VVc~~sD 147 (312) .+++++|-+ |+..+..........+.. ...+.+++||+.|+| T Consensus 72 ~ii~v~d~~--~~~~~~~~~~~l~~~~~~~~~~~~piiiv~nK~D 114 (165) T d1ksha_ 72 GLIWVVDSA--DRQRMQDCQRELQSLLVEERLAGATLLIFANKQD 114 (165) T ss_dssp EEEEEEETT--CGGGHHHHHHHHHHHHTCGGGTTCEEEEEEECTT T ss_pred HHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC T ss_conf 322322310--5688889999999998555307960899987468 No 16 >d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens)} Probab=96.78 E-value=0.0038 Score=35.16 Aligned_columns=164 Identities=8% Q ss_pred EEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 89975983317999998514-77865566557502563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFP-EGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~-~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) ++++|+.+.|||+|++++.. .-.+.+.++.+.++....+..+ .....+..|-..+........-..+..++ .++ T Consensus 6 I~iiG~~~vGKTsll~~~~~~~~~~~~~~T~~~~~~~~~~~~~-~~~~~~~i~D~~g~~~~~~~~~~~~~~~~----~~i 80 (170) T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN-RGPIKFNVWDTAGQEKFGGLRDGYYIQAQ----CAI 80 (170) T ss_dssp EEEEECTTSSHHHHHHTTC-----CCEEEETTEEEEEEEECBT-TCCEEEEEEECTTHHHHSSCGGGGTTTCC----EEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEC-CCEEEEEECCCCCCHHHHHHHHHHCCCCC----EEE T ss_conf 9998179987999999986481166623337874567887538-92799997157641012221123205775----799 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEC Q ss_conf 98516663446899999999998640689987389984773456655324541157889999999999988294158852 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFYIC 186 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiYts 186 (312) ++.|-+. ++.+-. +..|+...+....+.++++|..|+| |+.+. ..++.-.|..+ ++...|-+ T Consensus 81 lv~d~~~--~~s~~~-~~~~~~~~~~~~~~~piiiVgnK~D----l~~~~--~~~e~~~~~~~--------~~~~~~e~- 142 (170) T d1i2ma_ 81 IMFDVTS--RVTYKN-VPNWHRDLVRVCENIPIVLCGNKVD----IKDRK--VKAKSIVFHRK--------KNLQYYDI- 142 (170) T ss_dssp EEEETTS--GGGGTT-HHHHHHHHHHHHCSCCEEEEEECCC----CSCSC--CTTTSHHHHSS--------CSSEEEEE- T ss_pred EEEECCC--CCHHHH-HHHHHHHHHHCCCCEEEEEEEEECC----HHHHH--HHHHHHHHHHH--------CCCCEEEE- T ss_conf 9970577--412688-8887654431257527899875122----02322--38999999985--------69918999- Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC Q ss_conf 565313555667788887530012477877522 Q Fun_Sc_NP_0140 187 EDHTEEKREEAQRLKYQELLKHFCEDRDMKDHI 219 (312) Q Consensus 187 ~ts~~~~kn~~~~l~y~~L~~h~l~~~~~~~~a 219 (312) |++...|-...+.+ +...+..-|....+ T Consensus 143 --Sak~~~~i~e~f~~---l~~~l~~~p~~~~~ 170 (170) T d1i2ma_ 143 --SAKSNYNFEKPFLW---LARKLIGDPNLEFV 170 (170) T ss_dssp --BTTTTBTTTHHHHH---HHHHHHTCTTCCBC T ss_pred --ECCCCCCHHHHHHH---HHHHHHCCCCEECC T ss_conf --72689898899999---99998458871009 No 17 >d1mh1__ c.37.1.8 (-) Rac {Human (Homo sapiens)} Probab=96.61 E-value=0.024 Score=30.54 Aligned_columns=177 Identities=6% Q ss_pred CCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCC Q ss_conf 66443899759833179999985147786556655750256335621213326889986078543588788771877878 Q Fun_Sc_NP_0140 23 TATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSK 102 (312) Q Consensus 23 ~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~ 102 (312) |....++++|..+.||++|++++..+.................+.-+ .....+.+|-..|.-.. ..+.+-++... T Consensus 3 ~~~iKi~iiG~~~vGKTsli~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~l~i~d~~g~~~~-~~~~~~~~~~~--- 77 (183) T d1mh1__ 3 PQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVD-GKPVNLGLWDTAGQEDY-DRLRPLSYPQT--- 77 (183) T ss_dssp CEEEEEEEECSTTSSHHHHHHHHHHSSCCSSCCCCSCCEEEEEEEET-TEEEEEEEECCCCSGGG-TTTGGGGCTTC--- T ss_pred CCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEE-EEEEEEEEECCCCCHHH-HHHCCCCCCCC--- T ss_conf 71589999807998799999998617336653440566788899980-06877665115431011-00010212332--- Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEE Q ss_conf 27999851666344689999999999864068998738998477345665532454115788999999999998829415 Q Fun_Sc_NP_0140 103 VRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSL 182 (312) Q Consensus 103 ~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASL 182 (312) ..++++.|-+ |+++.-+....|...++....+.++++|..|+|....-+-....-....-.......+.+|=++|+.. T Consensus 78 ~~~ilv~di~--~~~s~~~~~~~~~~~~~~~~~~~piiivgnK~D~~~~~~~~~~~~~~~~~~i~~~e~~~~a~~~~~~~ 155 (183) T d1mh1__ 78 DVSLICFSLV--SPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVK 155 (183) T ss_dssp SEEEEEEETT--CHHHHHHHHHTHHHHHHHHSTTSCEEEEEECHHHHTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSE T ss_pred CEEEEEEECC--CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCE T ss_conf 1789997435--60258888788788875237881799986066751101355667764137677789999999718950 Q ss_pred EEECCCCCHHHHHHHHHHHHHHHH Q ss_conf 885256531355566778888753 Q Fun_Sc_NP_0140 183 FYICEDHTEEKREEAQRLKYQELL 206 (312) Q Consensus 183 iYts~ts~~~~kn~~~~l~y~~L~ 206 (312) ++-+.....+.-+++.--.-+.++ T Consensus 156 ~~e~Sa~~~~gI~e~f~~~ir~~l 179 (183) T d1mh1__ 156 YLECSALTQRGLKTVFDEAIRAVL 179 (183) T ss_dssp EEECCTTTCTTHHHHHHHHHHHHS T ss_pred EEEEEECCCCCHHHHHHHHHHHHC T ss_conf 799760478787899999999960 No 18 >d1kao__ c.37.1.8 (-) Rap2a {Human (Homo sapiens)} Probab=96.59 E-value=0.15 Score=25.85 Aligned_columns=154 Identities=6% Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 38997598331799999851477865566557502563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) .++++|....||++|++++ -+.+...+..+-..-..-..-. .++..+.+.+.+.+..+..+-+.+..-..+. .++ T Consensus 5 kI~iiG~~~vGKTsli~~l--~~~~~~~~~~~t~~~~~~~~~~-~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~~--~ii 79 (167) T d1kao__ 5 KVVVLGSGGVGKSALTVQF--VTGTFIEKYDPTIEDFYRKEIE-VDSSPSVLEILDTAGTEQFASMRDLYIKNGQ--GFI 79 (167) T ss_dssp EEEEECCTTSSHHHHHHHH--HHSCCCSCCCTTCCEEEEEEEE-ETTEEEEEEEEECCCTTCCHHHHHHHHHHCS--EEE T ss_pred EEEEEECCCCCHHHHHHHH--HCCCCCCCCCCCEEEEEEEEEE-ECCEEEEEEEEECCCCCHHHHHHHHHHCCCC--EEE T ss_conf 8999807998789999998--6481267646520135799999-8357899998514674312344576512663--689 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCC-CCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 98516663446899999999998640689-98738998477345665532454115788999999999998829415885 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIKQLND-DNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFYI 185 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~-Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiYt 185 (312) ++.|-+ |+..|-..-..+-..++.... +.+++||..|+| |.++.....++-..|.. .+|+..|-+ T Consensus 80 ~v~d~~--~~~s~~~~~~~~~~~~~~~~~~~~p~iiv~nK~D----l~~~~~v~~~e~~~~~~--------~~~~~~~e~ 145 (167) T d1kao__ 80 LVYSLV--NQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVD----LESEREVSSSEGRALAE--------EWGCPFMET 145 (167) T ss_dssp EEEETT--CHHHHHHHHHHHHHHHHHTTTSCCCEEEEEECGG----GGGGCCSCHHHHHHHHH--------HHTSCEEEE T ss_pred EEEEEE--ECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECC----CCCCCCCCHHHHHHHHH--------HCCCCEEEE T ss_conf 998753--1123210347789999741788863899985035----44445579899999999--------649928999 Q ss_pred CCCCCHHHHHHHHHHHH Q ss_conf 25653135556677888 Q Fun_Sc_NP_0140 186 CEDHTEEKREEAQRLKY 202 (312) Q Consensus 186 s~ts~~~~kn~~~~l~y 202 (312) |++...|-..++.. T Consensus 146 ---Sak~g~~v~~lf~~ 159 (167) T d1kao__ 146 ---SAKSKTMVDELFAE 159 (167) T ss_dssp ---CTTCHHHHHHHHHH T ss_pred ---ECCCCCCHHHHHHH T ss_conf ---71589788899999 No 19 >d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae)} Probab=96.54 E-value=0.087 Score=27.28 Aligned_columns=156 Identities=9% Q ss_pred EEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 89975983317999998514-77865566557502563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFP-EGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~-~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) ++++|....||++|++++.. .-.+.+....+..+..........+...+..|-..+...+.. .....-.....++ T Consensus 5 i~ivG~~~vGKStLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i 80 (175) T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQS----LGVAFYRGADCCV 80 (175) T ss_dssp EEEECCTTSSHHHHHHHHHHSCCCTTC---CCCSCEEEEECCSSSCCEEEEEECCC--------------CCSTTCCEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCEEEEEEECCCCHHHHHHC----CCHHHHHHHHHEE T ss_conf 999807998899999998658013451340464246889998485479997436620234310----0001333223002 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHH--CCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE Q ss_conf 9851666344689999999999864--06899873899847734566553245411578899999999999882941588 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIK--QLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFY 184 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~--~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiY 184 (312) +..|-+....--.++.....+.... ....+.++++|+.|+|....-+... .+-++.++-.+|..-++ T Consensus 81 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~piiiv~nK~Dl~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 149 (175) T d1ky3a_ 81 LVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIVS-----------EKSAQELAKSLGDIPLF 149 (175) T ss_dssp EEEETTCHHHHHTHHHHHHHHHHHHCCSCTTTCCEEEEEECTTSCGGGCCSC-----------HHHHHHHHHHTTSCCEE T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCC-----------HHHHHHHHHHCCCCEEE T ss_conf 1111014310678899988899884110358955999840335410014320-----------89999999970895089 Q ss_pred ECCCCCHHHHHHHHHH Q ss_conf 5256531355566778 Q Fun_Sc_NP_0140 185 ICEDHTEEKREEAQRL 200 (312) Q Consensus 185 ts~ts~~~~kn~~~~l 200 (312) - +|+++..+-..++ T Consensus 150 e--~Sa~~g~gv~~lf 163 (175) T d1ky3a_ 150 L--TSAKNAINVDTAF 163 (175) T ss_dssp E--EBTTTTBSHHHHH T ss_pred E--EECCCCCCHHHHH T ss_conf 9--7516897788999 No 20 >d1ukvy_ c.37.1.8 (Y:) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae)} Probab=96.40 E-value=0.13 Score=26.29 Aligned_columns=153 Identities=10% Q ss_pred EEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 89975983317999998514-77865566557502563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFP-EGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~-~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) ++++|....|||+|+.++.. .-.+.+.+..+..|....+..+ ....++.+|-..+......-....+-+++ .+| T Consensus 9 I~iiG~~~vGKTSLi~~~~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~~i~i~D~~g~e~~~~~~~~~~~~ad----~ii 83 (204) T d1ukvy_ 9 LLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELD-GKTVKLQIWDTAGQERFRTITSSYYRGSH----GII 83 (204) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCTTCCCSSCCCEEEEEEEET-TEEEEEEEECCTTTTTTTCCCHHHHTTCS----EEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEC-CEEEEEEEECCCCCCHHHHHHHHHHCCCC----EEE T ss_conf 8898169977999999986481057624521124668899888-86887443026773012345677614797----479 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEC Q ss_conf 98516663446899999999998640689987389984773456655324541157889999999999988294158852 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFYIC 186 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiYts 186 (312) +..|-+ |+...-+.-...-...+....+-++++|..++| +..+.-...+ -.+.+|-.+|+..+-+ T Consensus 84 lvfd~~--d~~S~~~~~~~~~~i~~~~~~~~~iiivgnK~D----~~~~~~v~~~--------e~~~~~~~~~~~~~e~- 148 (204) T d1ukvy_ 84 IVYDVT--DQESFNGVKMWLQEIDRYATSTVLKLLVGNKCD----LKDKRVVEYD--------VAKEFADANKMPFLET- 148 (204) T ss_dssp EEEETT--CHHHHHHHHHHHHHHHHHSCTTCEEEEEEECTT----CTTTCCSCHH--------HHHHHHHHTTCCEEEC- T ss_pred EEEECC--CHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC----CHHCCCCCHH--------HHHHHHHHCCCEEEEE- T ss_conf 998516--601233568999998653102410245541134----0010254189--------9999999619818999- Q ss_pred CCCCHHHHHHHHHHHH Q ss_conf 5653135556677888 Q Fun_Sc_NP_0140 187 EDHTEEKREEAQRLKY 202 (312) Q Consensus 187 ~ts~~~~kn~~~~l~y 202 (312) |++...|-...+.. T Consensus 149 --SAk~~~gi~e~f~~ 162 (204) T d1ukvy_ 149 --SALDSTNVEDAFLT 162 (204) T ss_dssp --CTTTCTTHHHHHHH T ss_pred --ECCCCCCHHHHHHH T ss_conf --51689888999999 No 21 >d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3} Probab=96.26 E-value=0.086 Score=27.31 Aligned_columns=119 Identities=6% Q ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHC Q ss_conf 46553664438997598331799999851477865566557502563356212133268899860785435887887718 Q Fun_Sc_NP_0140 18 INSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQ 97 (312) Q Consensus 18 ~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~ 97 (312) ..++--....++++|....||++|++++ -+.+.....+..++....+..+ +.++.+|-..|.-....-.-..+-. T Consensus 9 ~~~~~~~~~ki~ivG~~~~GKTsli~~l--~~~~~~~~~~t~~~~~~~i~~~---~~~~~i~d~~G~~~~~~~~~~~~~~ 83 (176) T d1fzqa_ 9 LKSAPDQEVRILLLGLDNAGKTTLLKQL--ASEDISHITPTQGFNIKSVQSQ---GFKLNVWDIGGQRKIRPYWRSYFEN 83 (176) T ss_dssp CSSCCSSCEEEEEEESTTSSHHHHHHHH--CCSCCEEEEEETTEEEEEEEET---TEEEEEEECSSCGGGHHHHHHHHTT T ss_pred HCCCCCCEEEEEEEECCCCCHHHHHHHH--HCCCCCCEEEEEEEEEEEEECE---EEEEEECCCCCHHHHHHHHHHHHCC T ss_conf 2489986479999807999789999998--4576431023478887543110---4521003574013567888885216 Q ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC-CCCCEEEEEECCC Q ss_conf 7787827999851666344689999999999864068-9987389984773 Q Fun_Sc_NP_0140 98 EHSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLN-DDNEFSVWCLNSG 147 (312) Q Consensus 98 ~~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~-~Dt~i~VVc~~sD 147 (312) .+ .++++.|-+ |++.+-.....+...+.... ..-++++|..|+| T Consensus 84 ~~----~~ilv~d~~--~~~s~~~~~~~~~~~l~~~~~~~~piiiv~nK~D 128 (176) T d1fzqa_ 84 TD----ILIYVIDSA--DRKRFEETGQELTELLEEEKLSCVPVLIFANKQD 128 (176) T ss_dssp CS----EEEEEEETT--CGGGHHHHHHHHHHHTTCGGGTTCCEEEEEECTT T ss_pred CC----EEEEEEECC--CCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCC T ss_conf 86----489998256--7566788999999997323557505899982258 No 22 >d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus} Probab=96.09 E-value=0.085 Score=27.34 Aligned_columns=174 Identities=8% Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEC---CCHHHHHHHHHHHCCCCCCC Q ss_conf 389975983317999998514778655665575025633562121332688998607---85435887887718778782 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIR---NTDDALDLLKPFLQEHSSKV 103 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~---~~~~~~~LLkp~L~~~s~~~ 103 (312) ++-+.|....||++|++.+..+.. ..-+..+-........-...+..++.+|-..| ...............-.... T Consensus 3 ~I~iiG~~~~GKSSLi~~L~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~i~l~D~pG~~~~~~~~~~~~~~~~~~~~~~d 81 (180) T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTRAHP-KIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTR 81 (180) T ss_dssp SEEEECCGGGCHHHHHHHHCSSCC-EECCCTTCSSCCEEEEEECSSSCEEEEEECCCCCCCGGGSCCSCHHHHHHHTSSS T ss_pred CEEEEECCCCCHHHHHHHHHCCCC-EEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 148874599868999999856840-1320367612578889974288403673267544565310011222210123334 Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEE Q ss_conf 79998516663446899999999998640689987389984773456655324541157889999999999988294158 Q Fun_Sc_NP_0140 104 RWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLF 183 (312) Q Consensus 104 l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLi 183 (312) .+++++|=+. +++.-...++.++........+.++.+|+.|+|.++ +-....++..+-+.|...+ T Consensus 82 ~i~~v~d~~~-~~~~~~~~~~~~l~~~~~~~~~~p~iiv~NK~Dl~~--------------~~~~~~~~~~~~~~~~~v~ 146 (180) T d1udxa2 82 VLLYVLDAAD-EPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLE--------------EEAVKALADALAREGLAVL 146 (180) T ss_dssp EEEEEEETTS-CHHHHHHHHHHHHHHHCHHHHHSCEEEEEECCTTSC--------------HHHHHHHHHHHHTTTSCEE T ss_pred HHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC--------------HHHHHHHHHHHHHCCCCEE T ss_conf 5443200134-304789999999875445532100001202456667--------------4458999999973589789 Q ss_pred EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC Q ss_conf 852565313555667788887530012477877522 Q Fun_Sc_NP_0140 184 YICEDHTEEKREEAQRLKYQELLKHFCEDRDMKDHI 219 (312) Q Consensus 184 Yts~ts~~~~kn~~~~l~y~~L~~h~l~~~~~~~~a 219 (312) .+ |+.+..+-..++.+..-++-....-.+..++ T Consensus 147 ~i---Sa~tg~Gi~eL~e~l~~~i~~~~~~~~~~~~ 179 (180) T d1udxa2 147 PV---SALTGAGLPALKEALHALVRSTPPPEMPKPV 179 (180) T ss_dssp EC---CTTTCTTHHHHHHHHHHHHHTSCCCCCCCCC T ss_pred EE---ECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC T ss_conf 98---3466888789999999998626888888889 No 23 >d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1} Probab=96.07 E-value=0.046 Score=28.90 Aligned_columns=127 Identities=12% Q ss_pred CHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEC Q ss_conf 13889988641011465536644389975983317999998514778655665575025633562121332688998607 Q Fun_Sc_NP_0140 4 CNAWDKLLSQNESTINSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIR 83 (312) Q Consensus 4 ~NlWs~iLse~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~ 83 (312) ||+.|+|. +..-++|. .-.+++.|....||++|++++ -+.+........+..+..+... +..+..|-+.+ T Consensus 1 ~~~~~~~~---~~~~~~~~--~~ki~ivG~~n~GKSSLi~~l--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~ 70 (182) T d1moza_ 1 GNIFSSMF---DKLWGSNK--ELRILILGLDGAGKTTILYRL--QIGEVVTTKPTIGFNVETLSYK---NLKLNVWDLGG 70 (182) T ss_dssp CHHHHHHH---GGGTTCSS--CEEEEEEEETTSSHHHHHHHT--CCSEEEEECSSTTCCEEEEEET---TEEEEEEEEC- T ss_pred CHHHHHHH---HHHCCCCC--EEEEEEEECCCCCHHHHHHHH--HHCCCCCCCCEEEEEEEEEEEC---CCCEEECCCCC T ss_conf 91588999---97437882--279999817998689999987--5011001110024578987504---75212104652 Q ss_pred CCHHHHHHHHHHHCCCC-CCCEEEEEECCCCCCHHHHHHHHHHHHHHHH-CCCCCCCEEEEEECCC Q ss_conf 85435887887718778-7827999851666344689999999999864-0689987389984773 Q Fun_Sc_NP_0140 84 NTDDALDLLKPFLQEHS-SKVRWLILLDWTLNDQKLWLNELSYAFNKIK-QLNDDNEFSVWCLNSG 147 (312) Q Consensus 84 ~~~~~~~LLkp~L~~~s-~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~-~l~~Dt~i~VVc~~sD 147 (312) ..... ....... .-..+++..|-+. +..+....+.+..... ....+-++++|+.|+| T Consensus 71 ~~~~~-----~~~~~~~~~~~~~i~v~d~~~--~~~~~~~~~~~~~~~~~~~~~~~p~iiv~nK~D 129 (182) T d1moza_ 71 QTSIR-----PYWRCYYADTAAVIFVVDSTD--KDRMSTASKELHLMLQEEELQDAALLVFANKQD 129 (182) T ss_dssp ---CC-----TTGGGTTTTEEEEEEEEETTC--TTTHHHHHHHHHHHTTSSTTSSCEEEEEEECTT T ss_pred CHHHH-----HHHHHHHHCCCEEEEEEEECC--CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCC T ss_conf 11234-----555654102323578986034--567778999999998753016863489985258 No 24 >d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1} Probab=95.95 E-value=0.16 Score=25.68 Aligned_columns=110 Identities=12% Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 38997598331799999851477865566557502563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) .++++|....||++|+.++.........++.+.....+.. .+.++..|-..| ...+....+..+ ..-..++ T Consensus 2 ki~iiG~~~~GKSsLi~~l~~~~~~~~~~t~~~~~~~i~~-----~~~~~~~~D~~g-~~~~~~~~~~~~---~~~~~ii 72 (160) T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGG-QDKIRPLWRHYF---QNTQGLI 72 (160) T ss_dssp EEEEECSTTSSHHHHHHHHHHHCSSCCCCCSSCCEEEEEC-----SSCEEEEEECCC-CGGGHHHHHHHT---TTCSEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEEEEEEE-----EEEEEEEECCCC-CCCHHHHHHHHH---CCCCEEE T ss_conf 7899807999899999998468202222001589999973-----478998703664-420112235440---3781899 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCC-CCCCEEEEEECCC Q ss_conf 9851666344689999999999864068-9987389984773 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIKQLN-DDNEFSVWCLNSG 147 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~-~Dt~i~VVc~~sD 147 (312) ++.|=+ |+..+.+....|...++... .+.++++|..|+| T Consensus 73 ~v~d~~--~~~s~~~~~~~~~~~~~~~~~~~~piiiv~NK~D 112 (160) T d1r8sa_ 73 FVVDSN--DRERVNEAREELMRMLAEDELRDAVLLVFANKQD 112 (160) T ss_dssp EEEETT--CGGGHHHHHHHHHHHHTCGGGTTCEEEEEEECTT T ss_pred EEEECC--CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC T ss_conf 997145--6202688999999998523027861689986358 No 25 >d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus)} Probab=95.71 E-value=0.09 Score=27.20 Aligned_columns=166 Identities=5% Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCC--CCCE Q ss_conf 38997598331799999851477865566557502563356212133268899860785435887887718778--7827 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHS--SKVR 104 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s--~~~l 104 (312) .++++|..+.|||+++.++ .+...+..+........ +++++.+|=..|.-.. ..+.++. .-.- T Consensus 4 ki~~lG~~~vGKTsll~~~--~~~~~~~~~~~~~~~~~-------~~~~l~i~D~~G~~~~------~~~~~~~~~~~~~ 68 (195) T d1svsa1 4 KLLLLGAGESGKSTIVKQM--KIIHEAGTGIVETHFTF-------KDLHFKMFDVGGQRSE------RKKWIHCFEGVTA 68 (195) T ss_dssp EEEEECSTTSSHHHHHHHH--HHHHSCCCSEEEEEEEE-------TTEEEEEEEECCSGGG------GGGGGGGCTTCSE T ss_pred EEEEEECCCCCHHHHHHHH--HCCCCCCCEEEEEEEEE-------EEEEEEEEECCCCHHH------HHHHHHHHCCCCE T ss_conf 8999824998677876543--15841242179999986-------4799999864775157------7777865069975 Q ss_pred EEEEECCCCCCH----HHHHHHHHHHHHHHH-----CCCCCCCEEEEEECCCHHHHHHH-----------CCCCCCHHHH Q ss_conf 999851666344----689999999999864-----06899873899847734566553-----------2454115788 Q Fun_Sc_NP_0140 105 WLILLDWTLNDQ----KLWLNELSYAFNKIK-----QLNDDNEFSVWCLNSGEILNLQR-----------HTTVWQSVHI 164 (312) Q Consensus 105 ~ViLLDWs~~Dp----~~Wlr~Lr~~~~~L~-----~l~~Dt~i~VVc~~sD~i~~LEK-----------e~~~w~de~f 164 (312) +++..|.|..+. .-|...+++|...++ ....+.+++||+.|+|-...-.+ .....-++.. T Consensus 69 ~i~V~Disd~~s~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~piilv~NK~Dl~~~k~~~~~~~~~~~~~~~~~~~e~~~ 148 (195) T d1svsa1 69 IIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAA 148 (195) T ss_dssp EEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTCGGGTTSEEEEEEECHHHHHHHTTTSCGGGTCTTCCSCSSHHHHH T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHCCCCCCHHHHCCCCCCCCCHHHHH T ss_conf 89998658602346666445679999999999741457789669998338620322453453123022347776789999 Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH Q ss_conf 9999999999988294158852565313555667788887530 Q Fun_Sc_NP_0140 165 DFILQTLRSFCYFNDSSLFYICEDHTEEKREEAQRLKYQELLK 207 (312) Q Consensus 165 DfIqQ~LRtvcL~yGASLiYts~ts~~~~kn~~~~l~y~~L~~ 207 (312) .++++-...+--.-..-=+|.-+||++...|-...+.+..=++ T Consensus 149 ~~i~~~f~~~~~~~~~k~~~~~~tSAk~~~NI~~vF~~v~d~I 191 (195) T d1svsa1 149 AYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVI 191 (195) T ss_dssp HHHHHHHHTTCSCTTTCCEEEEECCTTCHHHHHHHHHHHHHHH T ss_pred HHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH T ss_conf 9999999986327777615678864012578999999999997 No 26 >d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1} Probab=94.97 E-value=0.46 Score=23.06 Aligned_columns=167 Identities=10% Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCC Q ss_conf 36644389975983317999998514778655665575025633562121332688998607854358878877187787 Q Fun_Sc_NP_0140 22 ETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSS 101 (312) Q Consensus 22 ~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~ 101 (312) ....-.++++|....||++|++++............|..+..+.. .+..+.+|-..+...... .-...-.. T Consensus 2 ~~~~~ki~iiG~~nvGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~d~~~~~~~~~----~~~~~~~~ 72 (169) T d1upta_ 2 MTREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTY-----KNLKFQVWDLGGLTSIRP----YWRCYYSN 72 (169) T ss_dssp CSSCEEEEEECSTTSSHHHHHHHHHHSSCCCCCCCSSEEEEEEEE-----TTEEEEEEEECCCGGGGG----GGGGGCTT T ss_pred CCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCEEEEEEEEC-----CCEEEEEEECCCHHHHHH----HHHHHHHH T ss_conf 861358999817998799999998578121332121288998623-----675899986254123333----44443321 Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC-CCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC Q ss_conf 827999851666344689999999999864068-9987389984773456655324541157889999999999988294 Q Fun_Sc_NP_0140 102 KVRWLILLDWTLNDQKLWLNELSYAFNKIKQLN-DDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDS 180 (312) Q Consensus 102 ~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~-~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGA 180 (312) ...++++.|=+ |+.........|...+.... .+.+++||+.|+|-......+. ..+......+-.++. T Consensus 73 ~~~~~~v~~~~--d~~~~~~~~~~~~~~~~~~~~~~~p~iiv~nK~Dl~~~~~~~~---------i~~~~~~~~~~~~~~ 141 (169) T d1upta_ 73 TDAVIYVVDSC--DRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSE---------MANSLGLPALKDRKW 141 (169) T ss_dssp CSEEEEEEETT--CCTTHHHHHHHHHHHHTCGGGTTCEEEEEEECTTSTTCCCHHH---------HHHHHTGGGCTTSCE T ss_pred HHHHHHHHHHH--CCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHH---------HHHHHHHHHHHCCCC T ss_conf 12565555442--3445788999999987301335510024320147300037889---------999988888622894 Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 1588525653135556677888875300124778 Q Fun_Sc_NP_0140 181 SLFYICEDHTEEKREEAQRLKYQELLKHFCEDRD 214 (312) Q Consensus 181 SLiYts~ts~~~~kn~~~~l~y~~L~~h~l~~~~ 214 (312) ..|.| |+.+..+-...+.. ++..+..++ T Consensus 142 ~~~~~---SA~~g~gi~e~~~~---l~~~i~~r~ 169 (169) T d1upta_ 142 QIFKT---SATKGTGLDEAMEW---LVETLKSRQ 169 (169) T ss_dssp EEEEC---CTTTCTTHHHHHHH---HHHHHHTCC T ss_pred EEEEE---ECCCCCCHHHHHHH---HHHHHHHCC T ss_conf 69998---53679888999999---999986249 No 27 >d1m2ob_ c.37.1.8 (B:) SAR1 {Baker's yeast (Saccharomyces cerevisiae)} Probab=94.58 E-value=0.54 Score=22.67 Aligned_columns=108 Identities=8% Q ss_pred EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEE Q ss_conf 89975983317999998514778655665575025633562121332688998607854358878877187787827999 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWLI 107 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~Vi 107 (312) ++++|....||++|++++............+..+......+. .+..|-..+...... -.-..-..-..+++ T Consensus 3 I~iiG~~n~GKTtLi~~l~~~~~~~~~~t~~~~~~~~~~~~~-----~~~i~d~~~~~~~~~----~~~~~~~~~~~ii~ 73 (167) T d1m2ob_ 3 LLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNI-----KFTTFDLGGHIQARR----LWKDYFPEVNGIVF 73 (167) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCCCCCCCSCEEEEEEETTE-----EEEEEECCCSGGGTT----SGGGGCTTCCEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEE-----EEEEEEEECHHHHCC----CHHHHHCCCCEEEE T ss_conf 899836999899999998379212454467667620300478-----999853100112100----01233236517899 Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHCCC--CCCCEEEEEECCC Q ss_conf 851666344689999999999864068--9987389984773 Q Fun_Sc_NP_0140 108 LLDWTLNDQKLWLNELSYAFNKIKQLN--DDNEFSVWCLNSG 147 (312) Q Consensus 108 LLDWs~~Dp~~Wlr~Lr~~~~~L~~l~--~Dt~i~VVc~~sD 147 (312) ..|=+. ++. .+.++.|+..+.... .+.++++|+.|+| T Consensus 74 v~D~~~--~~~-~~~~~~~l~~~~~~~~~~~~piiiv~nK~D 112 (167) T d1m2ob_ 74 LVDAAD--PER-FDEARVELDALFNIAELKDVPFVILGNKID 112 (167) T ss_dssp EEETTC--GGG-HHHHHHHHHHHHTCGGGTTCCEEEEEECTT T ss_pred ECCCCC--CCC-HHHHHHHHHHHHHHHHCCCCEEEEEEECCC T ss_conf 704577--456-678999999998633207980899973348 No 28 >d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)} Probab=94.18 E-value=0.27 Score=24.43 Aligned_columns=109 Identities=6% Q ss_pred EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEE Q ss_conf 89975983317999998514778655665575025633562121332688998607854358878877187787827999 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWLI 107 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~Vi 107 (312) ++++|..+.||++|++++ -+.+.......+++.+..+ ...+..+.+|-..|......-.-..+-.. ..+++ T Consensus 16 I~lvG~~~~GKTsll~~l--~~~~~~~~~~t~~~~~~~i---~~~~~~~~i~d~~g~~~~~~~~~~~~~~~----~~ii~ 86 (186) T d1f6ba_ 16 LVFLGLDNAGKTTLLHML--KDDRLGQHVPTLHPTSEEL---TIAGMTFTTFDLGGHIQARRVWKNYLPAI----NGIVF 86 (186) T ss_dssp EEEEEETTSSHHHHHHHH--SCC------CCCCCSCEEE---EETTEEEEEEEECC----CCGGGGGGGGC----SEEEE T ss_pred EEEEECCCCCHHHHHHHH--HCCCCCCEEEEEEEEEEEE---EEEEEEEEEEECCCHHHHHHHHHHHHCCC----CEEEE T ss_conf 999816999799999998--4681543022688878998---51147899840552134467778774055----55888 Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHCCCCCC-CEEEEEECCC Q ss_conf 851666344689999999999864068998-7389984773 Q Fun_Sc_NP_0140 108 LLDWTLNDQKLWLNELSYAFNKIKQLNDDN-EFSVWCLNSG 147 (312) Q Consensus 108 LLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt-~i~VVc~~sD 147 (312) ..|=+ |+.........+...+....... +++||+.|.| T Consensus 87 v~D~~--d~~~~~~~~~~l~~~~~~~~~~~~piiiv~NK~D 125 (186) T d1f6ba_ 87 LVDCA--DHERLLESKEELDSLMTDETIANVPILILGNKID 125 (186) T ss_dssp EEETT--CGGGHHHHHHHHHHHHTCGGGTTSCEEEEEECTT T ss_pred EEECC--CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCC T ss_conf 85245--7566678999999987401017960899852657 No 29 >d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=94.18 E-value=0.17 Score=25.58 Aligned_columns=146 Identities=10% Q ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHC--------------CCCCCCCCCCCCCEEEEECCCCCCCC------------C Q ss_conf 553664438997598331799999851--------------47786556655750256335621213------------3 Q Fun_Sc_NP_0140 20 STETATITAIIYSPSSKTLHQFINICF--------------PEGSNSILDTTLINYATIGWTNDLKE------------N 73 (312) Q Consensus 20 ~k~~~~k~~lilg~~~~~~~~fi~~l~--------------~~~~e~~~~~~~L~y~y~~v~~d~~d------------~ 73 (312) +|.-+..|+.++|--..||++++..|. ...+....++..-.+.+.+...+-++ . T Consensus 1 ~~~k~~iNi~viGHVDhGKTTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~Er~rgiti~~~~~~~~ 80 (239) T d1f60a3 1 GKEKSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFE 80 (239) T ss_dssp CCCCEEEEEEEEECTTSCHHHHHHHHHHHHSCSSHHHHHHHHHHGGGGSSSCCCHHHHHHHHHHHHHTTCCCSCSCEEEE T ss_pred CCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCEEECCEEEEC T ss_conf 99663488999963168868999999998377444688888766654200223202431687530013731210102430 Q ss_pred EEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHH-------HHHHHHHHHHCCCCCCCEEEEEECC Q ss_conf 268899860785435887887718778782799985166634468999-------9999999864068998738998477 Q Fun_Sc_NP_0140 74 YSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWLILLDWTLNDQKLWLN-------ELSYAFNKIKQLNDDNEFSVWCLNS 146 (312) Q Consensus 74 ~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~ViLLDWs~~Dp~~Wlr-------~Lr~~~~~L~~l~~Dt~i~VVc~~s 146 (312) ..---+.+...++| .++++-.++.-+---..|+++|=.. .+.. |.|+|+..++.++. .+++|+..|. T Consensus 81 ~~~~~i~iIDtPGH-~df~~~mi~g~~~~D~aiLVVda~~----g~~~~~~~~~~Qt~eh~~~~~~lgv-~~iiv~iNKm 154 (239) T d1f60a3 81 TPKYQVTVIDAPGH-RDFIKNMITGTSQADCAILIIAGGV----GEFEAGISKDGQTREHALLAFTLGV-RQLIVAVNKM 154 (239) T ss_dssp CSSEEEEEEECCCC-TTHHHHHHHSSSCCSEEEEEEECSH----HHHHHHTCTTSHHHHHHHHHHHTTC-CEEEEEEECG T ss_pred CCCCEEEEEECCCC-CCHHHHHHHHHHHCCEEEEEEECCC----CCCCCCHHHHHHHHHHHHHHHHCCC-CEEEEEEECC T ss_conf 45836899857876-3036788876534026789972566----4423220143899999999997189-8389998236 Q ss_pred CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC Q ss_conf 345665532454115788999999999998829 Q Fun_Sc_NP_0140 147 GEILNLQRHTTVWQSVHIDFILQTLRSFCYFND 179 (312) Q Consensus 147 D~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yG 179 (312) |.+ +|+.+.|+-|.+-++.|+-..| T Consensus 155 D~v--------~~~~~r~~~i~~ei~~~l~~~g 179 (239) T d1f60a3 155 DSV--------KWDESRFQEIVKETSNFIKKVG 179 (239) T ss_dssp GGG--------TTCHHHHHHHHHHHHHHHHHHT T ss_pred CCC--------CCCHHHHHHHHHHHHHHHHHCC T ss_conf 887--------7788899999999988887518 No 30 >d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial} Probab=93.82 E-value=0.81 Score=21.65 Aligned_columns=144 Identities=9% Q ss_pred CCCEEEEECCCCHHHHHHHHHHCCC---------------CCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHH Q ss_conf 6443899759833179999985147---------------7865566557502563356212133268899860785435 Q Fun_Sc_NP_0140 24 ATITAIIYSPSSKTLHQFINICFPE---------------GSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDA 88 (312) Q Consensus 24 ~~k~~lilg~~~~~~~~fi~~l~~~---------------~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~ 88 (312) +..|+.++|.-..||++|++.+... .....-..+|+---...+.-++.... |.+...++| T Consensus 2 ~~ini~iiGhvd~GKSTL~~~L~~~~~~~~~~~~~~~~~~D~~~~E~~rgiTi~~~~~~~~~~~~~----~~~iDtPGh- 76 (196) T d1d2ea3 2 PHVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARH----YAHTDCPGH- 76 (196) T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTSBCCCCHHHHHSCCEEEETTEEEECEEEEEECSSCE----EEEEECSSH- T ss_pred CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEECCCEEEEEECCCCE----EEEECCCHH- T ss_conf 716889986316886789999999987520024455654067642010540002047897125532----465233003- Q ss_pred HHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHH Q ss_conf 88788771877878279998516663446899999999998640689987389984773456655324541157889999 Q Fun_Sc_NP_0140 89 LDLLKPFLQEHSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFIL 168 (312) Q Consensus 89 ~~LLkp~L~~~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIq 168 (312) .++.+-.++.-+.--..++++|=.. .+..|-++++..+++.+. .+++|+..|.|.+. .++.|+++. T Consensus 77 ~~f~~~~~~~~~~aD~aiLVVda~~----g~~~qt~e~~~~~~~~g~-~~iiv~iNKiDlv~---------d~~~~~~~~ 142 (196) T d1d2ea3 77 ADYVKNMITGTAPLDGCILVVAAND----GPMPQTREHLLLARQIGV-EHVVVYVNKADAVQ---------DSEMVELVE 142 (196) T ss_dssp HHHHHHHHHTSSCCSEEEEEEETTT----CSCHHHHHHHHHHHHTTC-CCEEEEEECGGGCS---------CHHHHHHHH T ss_pred HHHHHHHHHHHHHHCCEEEEEECCC----CCCHHHHHHHHHHHHCCC-CEEEEEECCCCCCC---------CHHHHHHHH T ss_conf 4678899998765210468873356----310347999999996489-34898604578888---------788988764 Q ss_pred HHHHHHHHHCC-----CEEEEEC Q ss_conf 99999998829-----4158852 Q Fun_Sc_NP_0140 169 QTLRSFCYFND-----SSLFYIC 186 (312) Q Consensus 169 Q~LRtvcL~yG-----ASLiYts 186 (312) .-+|.++-+.| +..|++| T Consensus 143 ~~~~~~l~~~~~~~~~~piipiS 165 (196) T d1d2ea3 143 LEIRELLTEFGYKGEETPIIVGS 165 (196) T ss_dssp HHHHHHHHHTTSCTTTSCEEECC T ss_pred HHHHHHHHHCCCCCCCEEEEEHH T ss_conf 46677776427886432058710 No 31 >d1exma3 c.37.1.8 (A:3-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus} Probab=93.77 E-value=0.059 Score=28.25 Aligned_columns=144 Identities=8% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCC------------CEEEEEEEEECCCHHH Q ss_conf 5366443899759833179999985147786556655750256335621213------------3268899860785435 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKE------------NYSVDVYTLIRNTDDA 88 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d------------~~R~~vy~L~~~~~~~ 88 (312) +.-+..|+.+.|--..||++|++.|....+....++..-...+++...+-++ ...--.+.+...++|. T Consensus 5 ~~kp~inI~iiGhvd~GKSTL~~~Ll~~~~~~~~~~~~~~~~~~D~~~~E~~rgiTi~~~~~~~~~~~~~i~~iDtPGh~ 84 (210) T d1exma3 5 RTKPHVNVGTIGHVDHGKTTLTAALTFVTAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHA 84 (210) T ss_dssp CCSCEEEEEEECSTTSSHHHHHHHHHHHHHHHCTTCCCCCHHHHSCSHHHHHHTSCCSCEEEEEECSSCEEEEEECCCSG T ss_pred CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHCCCEEEEEEEEEEECCCEEEEECCCCHH T ss_conf 22684789998423888789999998875210011011221102455012113503423689984115148873277468 Q ss_pred HHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHH Q ss_conf 88788771877878279998516663446899999999998640689987389984773456655324541157889999 Q Fun_Sc_NP_0140 89 LDLLKPFLQEHSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFIL 168 (312) Q Consensus 89 ~~LLkp~L~~~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIq 168 (312) ++.+-.+..-+.--..|+++|=.. ....|-++++..++.++.. .++|++-|.|-++. ++.|+.|. T Consensus 85 -~f~~~~~~~~~~aD~aiLVVda~~----G~~~qt~~~l~~~~~~g~~-~iiv~iNKiDlv~~---------~~~~~~i~ 149 (210) T d1exma3 85 -DYIKNMITGAAQMDGAILVVSAAD----GPMPQTREHILLARQVGVP-YIVVFMNKVDMVDD---------PELLDLVE 149 (210) T ss_dssp -GGHHHHHHHHTTCSSEEEEEETTT----CSCHHHHHHHHHHHHTTCC-CEEEEEECGGGCCC---------HHHHHHHH T ss_pred -HHHHHHHHHHHHHCEEEEEECCCC----CCCHHHHHHHHHHHHCCCC-CEEEEEECCCCCCC---------HHHHHHHH T ss_conf -899999998776334433421433----2202468999999972897-16899613588885---------89999999 Q ss_pred HHHHHHHHHCC Q ss_conf 99999998829 Q Fun_Sc_NP_0140 169 QTLRSFCYFND 179 (312) Q Consensus 169 Q~LRtvcL~yG 179 (312) +.+|.++-++| T Consensus 150 ~ev~~~l~~~~ 160 (210) T d1exma3 150 MEVRDLLNQYE 160 (210) T ss_dssp HHHHHHHHHTT T ss_pred HHHHHHHHHCC T ss_conf 99998653138 No 32 >d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae)} Probab=93.69 E-value=0.29 Score=24.27 Aligned_columns=122 Identities=10% Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 38997598331799999851477865566557502563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) +++++|....|||+|++++ -+.+...-.+..+ ....-..+...+.+|-..|...-...+...+......-..+| T Consensus 5 ~V~i~G~~~~GKTsLl~~l--~~~~~~~~~~~~~----~~~~~~~~~~~~~liDtpG~~~~~~~~~~~~~~~~~~~d~iI 78 (209) T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLL--TTDSVRPTVVSQE----PLSAADYDGSGVTLVDFPGHVKLRYKLSDYLKTRAKFVKGLI 78 (209) T ss_dssp EEEEECSTTSSHHHHHHHH--HHSSCCCBCCCSS----CEEETTGGGSSCEEEECCCCGGGTHHHHHHHHHHGGGEEEEE T ss_pred EEEEEECCCCCHHHHHHHH--HCCCCCCCEECCE----EEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEE T ss_conf 8999836999789999998--4683133020100----488986367799998745722368999999986336732899 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHH----CCCCCCCEEEEEECCCH---------HHHHHHC Q ss_conf 9851666344689999999999864----06899873899847734---------5665532 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIK----QLNDDNEFSVWCLNSGE---------ILNLQRH 155 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~----~l~~Dt~i~VVc~~sD~---------i~~LEKe 155 (312) +++|=+. ++..+-..-......|. ......+++|+|-|.|- -+.||+| T Consensus 79 ~VvDs~~-~~~~~~~~~~~l~~il~~~~~~~~~~vPiii~~NK~Dl~~a~~~~~i~~~le~e 139 (209) T d1nrjb_ 79 FMVDSTV-DPKKLTTTAEFLVDILSITESSCENGIDILIACNKSELFTARPPSKIKDALESE 139 (209) T ss_dssp EEEETTS-CTTCCHHHHHHHHHHHHHHHHHSTTCCCEEEEEECTTSTTCCCHHHHHHHHHHH T ss_pred EEEECCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHH T ss_conf 9975377-742379999999999999875431589389998554778898989999999998 No 33 >d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)} Probab=93.67 E-value=3.6 Score=17.90 Aligned_columns=151 Identities=7% Q ss_pred EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC-EEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 89975983317999998514778655665575-02563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFPEGSNSILDTTLI-NYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L-~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) ++++|....||++|++++ -+.+......+. +..+...-.-+....++.+|...+............-..+. ++ T Consensus 6 i~lvG~~nvGKSsLi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~~~----~~ 79 (166) T d1ctqa_ 6 LVVVGAGGVGKSALTIQL--IQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEG----FL 79 (166) T ss_dssp EEEEESTTSSHHHHHHHH--HHCCCCCSCCCCSEEEEEEEEEETTEEEEEEEEEECCCGGGHHHHHHHHHHCSE----EE T ss_pred EEEEECCCCCHHHHHHHH--HCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHH----HH T ss_conf 999817998799999998--648113342455533679999981037788875135620001222101000133----22 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHH-CCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 9851666344689999999999864-068998738998477345665532454115788999999999998829415885 Q Fun_Sc_NP_0140 107 ILLDWTLNDQKLWLNELSYAFNKIK-QLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSSLFYI 185 (312) Q Consensus 107 iLLDWs~~Dp~~Wlr~Lr~~~~~L~-~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGASLiYt 185 (312) +..|-+. +.........+....+ ....+.++++|+.|+|-. ++.-. .+-.+.++-.+|+..+.+ T Consensus 80 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~iiiv~nK~Dl~---~~~~~----------~~~~~~~~~~~~~~~~e~ 144 (166) T d1ctqa_ 80 CVFAINN--TKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA---ARTVE----------SRQAQDLARSYGIPYIET 144 (166) T ss_dssp EEEETTC--HHHHHTHHHHHHHHHHHHTCSSCCEEEEEECTTCS---CCCSC----------HHHHHHHHHHHTCCEEEC T ss_pred HHHHHCC--CHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHH---HCCCC----------HHHHHHHHHHCCCCEEEE T ss_conf 2221101--00000013566555420134782699970224633---50567----------899999999639918998 Q ss_pred CCCCCHHHHHHHHHHHH Q ss_conf 25653135556677888 Q Fun_Sc_NP_0140 186 CEDHTEEKREEAQRLKY 202 (312) Q Consensus 186 s~ts~~~~kn~~~~l~y 202 (312) |++...|-...+.. T Consensus 145 ---Sak~g~gi~e~f~~ 158 (166) T d1ctqa_ 145 ---SAKTRQGVEDAFYT 158 (166) T ss_dssp ---CTTTCTTHHHHHHH T ss_pred ---ECCCCCCHHHHHHH T ss_conf ---62689888899999 No 34 >d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis} Probab=93.19 E-value=0.99 Score=21.16 Aligned_columns=160 Identities=11% Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECC---------CHHHHHHHHHHHC Q ss_conf 3899759833179999985147786556655750256335621213326889986078---------5435887887718 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRN---------TDDALDLLKPFLQ 97 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~---------~~~~~~LLkp~L~ 97 (312) .+.++|....||++|++.+ -|........+-...+...... ..+.+..+...+++ ...+..++...+. T Consensus 25 ~I~iiG~~n~GKSSLin~L--~~~~~~~~~~~~~~~t~~~~~~-~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 101 (195) T d1svia_ 25 EIALAGRSNVGKSSFINSL--INRKNLARTSSKPGKTQTLNFY-IINDELHFVDVPGYGFAKVSKSEREAWGRMIETYIT 101 (195) T ss_dssp EEEEEEBTTSSHHHHHHHH--HTC-------------CCEEEE-EETTTEEEEECCCBCCCSSCHHHHHHHHHHHHHHHH T ss_pred EEEEEECCCCCHHHHHHHH--HCCCCEEEECCCCCCEEEEEEE-EECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 8999835999789999998--5786257631567511334676-205650799807754334650357789998876544 Q ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 77878279998516663446899999999998640689987389984773456655324541157889999999999988 Q Fun_Sc_NP_0140 98 EHSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYF 177 (312) Q Consensus 98 ~~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~ 177 (312) .-.....++++.|... -+..+..+.+..++..+ -+++||..|+|.+. .+.++-..+.+|..+-. T Consensus 102 ~~~~~d~v~~v~d~~~----~~~~~~~~~~~~~~~~~--~p~ivv~NK~Dl~~----------~~~~~~~~~~i~~~l~~ 165 (195) T d1svia_ 102 TREELKAVVQIVDLRH----APSNDDVQMYEFLKYYG--IPVIVIATKADKIP----------KGKWDKHAKVVRQTLNI 165 (195) T ss_dssp HCTTEEEEEEEEETTS----CCCHHHHHHHHHHHHTT--CCEEEEEECGGGSC----------GGGHHHHHHHHHHHHTC T ss_pred HHHHHHHHHHHCCCCC----CCCHHHHHHHHHHCCCC--CHHEEEEECCCCCC----------HHHHHHHHHHHHHHHHC T ss_conf 5544222111012345----76256788764200011--00013220014678----------75788999999999730 Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHH Q ss_conf 2941588525653135556677888875 Q Fun_Sc_NP_0140 178 NDSSLFYICEDHTEEKREEAQRLKYQEL 205 (312) Q Consensus 178 yGASLiYts~ts~~~~kn~~~~l~y~~L 205 (312) .+-.-+.-+.....+-.+++...+.+.+ T Consensus 166 ~~~~~i~~vSA~tg~Gi~el~~~i~~~i 193 (195) T d1svia_ 166 DPEDELILFSSETKKGKDEAWGAIKKMI 193 (195) T ss_dssp CTTSEEEECCTTTCTTHHHHHHHHHHHH T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHH T ss_conf 5899689985466878899999999984 No 35 >d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus} Probab=93.08 E-value=0.45 Score=23.15 Aligned_columns=142 Identities=9% Q ss_pred CCCEEEEECCCCHHHHHHHHHH--------------------------------CCCCCCCCCCCCCCEEEEECCCCCCC Q ss_conf 6443899759833179999985--------------------------------14778655665575025633562121 Q Fun_Sc_NP_0140 24 ATITAIIYSPSSKTLHQFINIC--------------------------------FPEGSNSILDTTLINYATIGWTNDLK 71 (312) Q Consensus 24 ~~k~~lilg~~~~~~~~fi~~l--------------------------------~~~~~e~~~~~~~L~y~y~~v~~d~~ 71 (312) +..|+.|+|--..||++|++.+ .-...++-.+|.-+...+....-+.+ T Consensus 2 p~inv~iiGhvd~GKSTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~er~rgiti~~~~~~~~~~~~ 81 (224) T d1jnya3 2 PHLNLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERERGVTINLTFMRFETKKY 81 (224) T ss_dssp CEEEEEEEESTTSSHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHC-----------CEEECSSC T ss_pred CCEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCC T ss_conf 70689998414888789999999871672068899999887553100123114545764311256632102456604685 Q ss_pred CCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCC-CCHHHH--HHHHHHHHHHHHCCCCCCCEEEEEECCCH Q ss_conf 332688998607854358878877187787827999851666-344689--99999999986406899873899847734 Q Fun_Sc_NP_0140 72 ENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWLILLDWTL-NDQKLW--LNELSYAFNKIKQLNDDNEFSVWCLNSGE 148 (312) Q Consensus 72 d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~ViLLDWs~-~Dp~~W--lr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~ 148 (312) .+.+...++|. ++.+-.++.-+---..++++|=.. ..|+.+ ..|.++++..++.++..-=|+++ .+ T Consensus 82 ------~i~~iD~PGH~-~f~~~~~~g~~~~D~ailVVda~~G~~~~~~~v~~qt~eh~~~~~~~g~~~iIV~i----NK 150 (224) T d1jnya3 82 ------FFTIIDAPGHR-DFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKTMGLDQLIVAV----NK 150 (224) T ss_dssp ------EEEECCCSSST-THHHHHHHTSSCCSEEEEEEECSTTHHHHHHSTTCHHHHHHHHHHHTTCTTCEEEE----EC T ss_pred ------EEEEECCCCCH-HHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE----EC T ss_conf ------78742376511-34788998765533146687555677522013446899999999980798089998----36 Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC Q ss_conf 5665532454115788999999999998829 Q Fun_Sc_NP_0140 149 ILNLQRHTTVWQSVHIDFILQTLRSFCYFND 179 (312) Q Consensus 149 i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yG 179 (312) |+..+-+ |..+.|+-|...++.++-++| T Consensus 151 iD~~~~~---~~~~~~~~i~~~i~~~l~~~g 178 (224) T d1jnya3 151 MDLTEPP---YDEKRYKEIVDQVSKFMRSYG 178 (224) T ss_dssp GGGSSST---TCHHHHHHHHHHHHHHHHHTT T ss_pred CCCCCCC---CHHHHHHHHHHHHHHHHHHHC T ss_conf 8888855---136899999999999999718 No 36 >d1etu_1 c.37.1.8 (5-200) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Escherichia coli} Probab=92.89 E-value=0.89 Score=21.43 Aligned_columns=136 Identities=8% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCC-------------------CCCCEEEEECCCCCCCCCEEEEEEEE Q ss_conf 53664438997598331799999851477865566-------------------55750256335621213326889986 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILD-------------------TTLINYATIGWTNDLKENYSVDVYTL 81 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~-------------------~~~L~y~y~~v~~d~~d~~R~~vy~L 81 (312) |.-+..|+.|+|--..||++|++.+.......... .....+....+.+-. +.+ T Consensus 3 ~~kp~inI~iiGh~d~GKTTL~~~L~~~~~~~~~~~~~~~~~~d~~~~e~~~giT~~~~~~~~~~~~~~--------i~~ 74 (196) T d1etu_1 3 RTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAAXXXXXXXXXXXXXXXGITINTSHVEYDTPTRH--------YAH 74 (196) T ss_dssp TTCSEEEEEEECSSSSSHHHHHHHHHHHHHHHH-------------------CCCCCCEEEEEECSSCE--------EEE T ss_pred CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCE--------EEE T ss_conf 877616899982127887899999999876652101110000001122234533672378998438835--------999 Q ss_pred ECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCH Q ss_conf 07854358878877187787827999851666344689999999999864068998738998477345665532454115 Q Fun_Sc_NP_0140 82 IRNTDDALDLLKPFLQEHSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQS 161 (312) Q Consensus 82 ~~~~~~~~~LLkp~L~~~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~d 161 (312) ...++| .++.+-....-+.--..++++|=+. ....|-.+++..+++.+.. .++|+..|-|.+ -.+ T Consensus 75 iDTPGH-~~f~~~~~~~~~~aD~aiLVIda~e----gi~~qt~e~l~~~~~~~~~-~iiVviNKiDli---------~~~ 139 (196) T d1etu_1 75 VDCPGH-ADYVKNMITGAAQMDGAILVVAATD----GPMPQTREHILLGRQVGVP-YIIVFLNKCDMV---------DDE 139 (196) T ss_dssp EECSSH-HHHHHHHHSSTTCCSEEEEEECTTS----CSCHHHHHHHHHHHHHTCC-EEEEEEECCSSC---------CCH T ss_pred EECCHH-HHHHHHHHHHHHHHHHEEEEECCCC----CCCCHHHHHHHHHHHCCCC-EEEEEECCCCCC---------CCH T ss_conf 726325-6789999999888601330211445----6662478999999971896-189970456888---------878 Q ss_pred HHHHHHHHHHHHHHHHCC Q ss_conf 788999999999998829 Q Fun_Sc_NP_0140 162 VHIDFILQTLRSFCYFND 179 (312) Q Consensus 162 e~fDfIqQ~LRtvcL~yG 179 (312) +.++.+.+-+|.++-+|| T Consensus 140 ~~~~~~~~~~~~~l~~~~ 157 (196) T d1etu_1 140 ELLELVEMEVRELLSQYD 157 (196) T ss_dssp HHHHHHHHHHHHHHHHHS T ss_pred HHHHHHHHHHHHHHHHCC T ss_conf 999999999998764138 No 37 >d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus} Probab=92.37 E-value=0.57 Score=22.53 Aligned_columns=129 Identities=11% Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHCC--CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHH-HHHHHHHHCC Q ss_conf 36644389975983317999998514--77865566557502563356212133268899860785435-8878877187 Q Fun_Sc_NP_0140 22 ETATITAIIYSPSSKTLHQFINICFP--EGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDA-LDLLKPFLQE 98 (312) Q Consensus 22 ~~~~k~~lilg~~~~~~~~fi~~l~~--~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~-~~LLkp~L~~ 98 (312) +...-.+.++|....||++|++++.. .......++.-....+..+......-.-++.-=+....... ..+.+-.++. T Consensus 2 ~~~~~~I~ivG~~n~GKSTLin~l~~~~~~~~~~~~~tT~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~ 81 (178) T d1wf3a1 2 KTYSGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFMDQEVYEA 81 (178) T ss_dssp CCEEEEEEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEEEEEETTEEEEEEECCCCCCCCSHHHHHHHHHHHHH T ss_pred CEECCEEEEEECCCCCHHHHHHHHHCCCCCEECCCCCEEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCH T ss_conf 20043689983499878999999845511000155514676543200037621588546311000123445432000010 Q ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHH Q ss_conf 78782799985166634468999999999986406899873899847734566553 Q Fun_Sc_NP_0140 99 HSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQR 154 (312) Q Consensus 99 ~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEK 154 (312) -..-..+++++|-+. .+.++-..+...++....+.++.+|..|+|.+...+. T Consensus 82 i~~~d~ii~viD~~~----~~~~~~~~~~~~l~~~~~~~piiiv~NK~Dl~~~~~~ 133 (178) T d1wf3a1 82 LADVNAVVWVVDLRH----PPTPEDELVARALKPLVGKVPILLVGNKLDAAKYPEE 133 (178) T ss_dssp TSSCSEEEEEEETTS----CCCHHHHHHHHHHGGGTTTSCEEEEEECGGGCSSHHH T ss_pred HHHCCEEEEECCCCC----CCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHH T ss_conf 101221355214556----6445678899999986203642110056676568578 No 38 >d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe)} Probab=91.64 E-value=2.1 Score=19.24 Aligned_columns=143 Identities=9% Q ss_pred EEEEECCCCHHHHHHHHHHC---------------CCCCCCCCCCCCCEEEEECCCCCCCCCEEEEE-----------EE Q ss_conf 38997598331799999851---------------47786556655750256335621213326889-----------98 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICF---------------PEGSNSILDTTLINYATIGWTNDLKENYSVDV-----------YT 80 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~---------------~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~v-----------y~ 80 (312) |+.++|--..||+++++.++ .......+......+....-..|.+....++. +. T Consensus 26 nI~iiGhVd~GKSTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~er~rg~ti~~~~~~~~~~~~~i~ 105 (245) T d1r5ba3 26 NIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFS 105 (245) T ss_dssp EEEEEECGGGTHHHHHHHHHHHTTSSCHHHHHHHHHHTCC----------------------------CCEEECSSEEEE T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCCCCCCCCCEEECCCCEEE T ss_conf 79998414788688999999972663267899987777650333221000004545310025554332205402575047 Q ss_pred EECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHH------HHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHH Q ss_conf 60785435887887718778782799985166634468999------999999986406899873899847734566553 Q Fun_Sc_NP_0140 81 LIRNTDDALDLLKPFLQEHSSKVRWLILLDWTLNDQKLWLN------ELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQR 154 (312) Q Consensus 81 L~~~~~~~~~LLkp~L~~~s~~~l~ViLLDWs~~Dp~~Wlr------~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEK 154 (312) +...++| .++++-.+..-+.--..|+++|=. ..-.-. |.++|+..+..++ -.+++|++.|-|. T Consensus 106 iIDtPGH-~~f~~~~~~g~~~~D~AiLVVdA~---~G~~~~~~~~~~qtkeh~~~~~~l~-i~~~IV~vNKiD~------ 174 (245) T d1r5ba3 106 LLDAPGH-KGYVTNMINGASQADIGVLVISAR---RGEFEAGFERGGQTREHAVLARTQG-INHLVVVINKMDE------ 174 (245) T ss_dssp ECCCC------------CTTSCSEEEEEEECS---TTHHHHTTSTTCCHHHHHHHHHHTT-CSSEEEEEECTTS------ T ss_pred EEECCCC-CHHHHHHHHHHHHHCEEEEEEECC---CCCCCHHHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCC------ T ss_conf 8607776-214688998865512147888767---8874012104689999999999807-9946999841377------ Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCC Q ss_conf 24541157889999999999988294 Q Fun_Sc_NP_0140 155 HTTVWQSVHIDFILQTLRSFCYFNDS 180 (312) Q Consensus 155 e~~~w~de~fDfIqQ~LRtvcL~yGA 180 (312) ...+|.+..|+-|..-+..+.-+.++ T Consensus 175 ~~~~~~~~~~~~i~~~i~~~l~~~~~ 200 (245) T d1r5ba3 175 PSVQWSEERYKECVDKLSMFLRRVAG 200 (245) T ss_dssp TTCSSCHHHHHHHHHHHHHHHHHHHC T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHC T ss_conf 76550278999999999999998505 No 39 >d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima} Probab=89.91 E-value=0.63 Score=22.29 Aligned_columns=122 Identities=8% Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEC-----CCHHHHHHHHHHHCCCCC Q ss_conf 389975983317999998514778655665575025633562121332688998607-----854358878877187787 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIR-----NTDDALDLLKPFLQEHSS 101 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~-----~~~~~~~LLkp~L~~~s~ 101 (312) |+.++|....||++|++.+.......+-+..+...-...-.-+ .++.++.++-..| .......+..-.+..-.. T Consensus 2 ~I~iiG~~~~GKSSLin~l~~~~~~~v~~~~~~t~~~~~~~~~-~~~~~~~~~Dt~g~~~~~~~~~~~~~~~~~~~~~~~ 80 (171) T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVE-WYGKTFKLVDTCGVFDNPQDIISQKMKEVTLNMIRE 80 (171) T ss_dssp EEEEECCTTSSHHHHHHHHHC--------------CCSEEEEE-ETTEEEEEEECTTTTSSGGGCCCHHHHHHHHHHHTT T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEEEEEECCC-CCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHH T ss_conf 5889825999789999998466530320456357887641011-233303432124401000001345666554443210 Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHC Q ss_conf 827999851666344689999999999864068998738998477345665532 Q Fun_Sc_NP_0140 102 KVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRH 155 (312) Q Consensus 102 ~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe 155 (312) -..+++++|=+. -+..+-..+...++..+ -++++|+.|+|.+...+++ T Consensus 81 ad~ii~vid~~~----~~~~~~~~~~~~l~~~~--~~ii~v~NK~D~~~~~~~~ 128 (171) T d1mkya1 81 ADLVLFVVDGKR----GITKEDESLADFLRKST--VDTILVANKAENLREFERE 128 (171) T ss_dssp CSEEEEEEETTT----CCCHHHHHHHHHHHHHT--CCEEEEEESCCSHHHHHHH T ss_pred CCCCEEEECCCC----CCCHHHHHHHHHHHCCC--CCEEEEEECCCCCCHHHHH T ss_conf 223035422556----64257889987643179--9779998724443224789 No 40 >d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli} Probab=89.79 E-value=9.3 Score=15.51 Aligned_columns=169 Identities=11% Q ss_pred HCCCCCCCCCCC--CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCC------ Q ss_conf 101146553664--438997598331799999851477865566557502563356212133268899860785------ Q Fun_Sc_NP_0140 14 NESTINSTETAT--ITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNT------ 85 (312) Q Consensus 14 ~~~~~~~k~~~~--k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~------ 85 (312) +|+-.-..+|.. ..+.++|....||++|++.+ -+.+......+...++.....- +-+....++...+.. T Consensus 3 ~~~~~~~~~p~~~~~~I~iiG~~~vGKSSLin~L--~~~~~~~~~~~~~~tt~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (188) T d1puia_ 3 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTL--TNQKSLARTSKTPGRTQLINLF-EVADGKRLVDLPGYGYAEVPE 79 (188) T ss_dssp EEESSGGGSSCSCSEEEEEEECTTSSHHHHHTTT--CCC-------------CCEEEE-EEETTEEEEECCCCC------ T ss_pred CCCCCHHHCCCCCCCEEEEEECCCCCHHHHHHHH--HCCCCEEEECCCCCCEEEEEEE-EEECCEEEEEECCCCCCCCCH T ss_conf 4553465587988867899736998788999998--5787324305656401223455-420232777640100125763 Q ss_pred ---HHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHH Q ss_conf ---43588788771877878279998516663446899999999998640689987389984773456655324541157 Q Fun_Sc_NP_0140 86 ---DDALDLLKPFLQEHSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSV 162 (312) Q Consensus 86 ---~~~~~LLkp~L~~~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de 162 (312) ..+..+....+.....-..++++.|.+. +..-.-..+...... ..-++++|..|+|.+.. + T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~~~~~~~~-----~~~p~iiv~nK~D~~~~----------~ 143 (188) T d1puia_ 80 EMKRKWQRALGEYLEKRQSLQGLVVLMDIRH-PLKDLDQQMIEWAVD-----SNIAVLVLLTKADKLAS----------G 143 (188) T ss_dssp CCHHHHHHHHHHHHHHCTTEEEEEEEEETTS-CCCHHHHHHHHHHHH-----TTCCEEEEEECGGGSCH----------H T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-CCHHHHHHHHHHHHH-----HHHHHHHHHHHCCCCCH----------H T ss_conf 5677877666789987643233321000100-111789999999987-----32245433201156887----------7 Q ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH Q ss_conf 8899999999999882941588525653135556677888 Q Fun_Sc_NP_0140 163 HIDFILQTLRSFCYFNDSSLFYICEDHTEEKREEAQRLKY 202 (312) Q Consensus 163 ~fDfIqQ~LRtvcL~yGASLiYts~ts~~~~kn~~~~l~y 202 (312) ...-..+.++.....++...-+ -+.|.....+...+... T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i-~~~SA~~g~gI~eL~~~ 182 (188) T d1puia_ 144 ARKAQLNMVREAVLAFNGDVQV-ETFSSLKKQGVDKLRQK 182 (188) T ss_dssp HHHHHHHHHHHHHGGGCSCEEE-EECBTTTTBSHHHHHHH T ss_pred HHHHHHHHHHHHHHHHCCCCCE-EEEECCCCCCHHHHHHH T ss_conf 8999999999999850699837-99743568888899999 No 41 >d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus)} Probab=89.49 E-value=1.3 Score=20.45 Aligned_columns=113 Identities=13% Q ss_pred EEEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEE Q ss_conf 389975983317999998514-7786556655750256335621213326889986078543588788771877878279 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFP-EGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRW 105 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~-~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~ 105 (312) .++++|....||++|++++.. .-......+.+..+.+..+..+ ..+....+...+.....+...+.......-..+ T Consensus 4 ki~ivG~~nvGKSsLl~~l~~~~~~~~~~~t~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~ 80 (184) T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD---DRLVTMQIWDTAGQERFQSLGVAFYRGADCCVL 80 (184) T ss_dssp EEEEECCTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEESS---SCEEEEEEEEECSSGGGSCSCCGGGTTCSEEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEC---CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 89998079987999999986680134535651258899999863---532125650575202455678888665444332 Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHC-----CCCCCCEEEEEECCC Q ss_conf 998516663446899999999998640-----689987389984773 Q Fun_Sc_NP_0140 106 LILLDWTLNDQKLWLNELSYAFNKIKQ-----LNDDNEFSVWCLNSG 147 (312) Q Consensus 106 ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~-----l~~Dt~i~VVc~~sD 147 (312) ++-.... .=...++.|+..+.. .....++++|..|+| T Consensus 81 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~piiiv~nK~D 122 (184) T d1vg8a_ 81 VFDVTAP-----NTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 122 (184) T ss_dssp EEETTCH-----HHHHTHHHHHHHHHHHHCCSSGGGSCEEEEEECTT T ss_pred HHHHCCC-----CCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCC T ss_conf 1110254-----30567888889999873013447753789825645 No 42 >d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi} Probab=88.88 E-value=28 Score=12.72 Aligned_columns=174 Identities=11% Q ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCC------CCCCEEEEECCCCCCCCCEE---------------EEE Q ss_conf 553664438997598331799999851477865566------55750256335621213326---------------889 Q Fun_Sc_NP_0140 20 STETATITAIIYSPSSKTLHQFINICFPEGSNSILD------TTLINYATIGWTNDLKENYS---------------VDV 78 (312) Q Consensus 20 ~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~------~~~L~y~y~~v~~d~~d~~R---------------~~v 78 (312) ||. ++.|+-|.|....||++|++.+.....+.... ..-.++.+.....+.+...+ .-. T Consensus 1 ~~~-~~i~VaiiG~~naGKSTLln~L~g~~~~~~~~~~~~g~T~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 79 (195) T d1kk1a3 1 SRQ-AEVNIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRR 79 (195) T ss_dssp CCS-EEEEEEEECSTTSSHHHHHHHHHTCCCC--CGGGGSCSSSCCEEEEEEEEECTTTCCEESSSBCTTTCCBCEEEEE T ss_pred CCC-CEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHEEEEECCCCCCCCCCCCEEEEEEEEEEECCCEE T ss_conf 998-7178999840698778899999987766665443156222201011100035420112210001110012036507 Q ss_pred EEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCC Q ss_conf 98607854358878877187787827999851666344689999999999864068998738998477345665532454 Q Fun_Sc_NP_0140 79 YTLIRNTDDALDLLKPFLQEHSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTV 158 (312) Q Consensus 79 y~L~~~~~~~~~LLkp~L~~~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~ 158 (312) +.+...+++ .++++-....-..-...++++|=....+..=............ ..+++++..+.|.+. T Consensus 80 ~~i~DtpG~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~vNK~D~~~-------- 146 (195) T d1kk1a3 80 VSFIDAPGH-EALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIG----QKNIIIAQNKIELVD-------- 146 (195) T ss_dssp EEEEECSSH-HHHHHHHHHCGGGCSEEEEEEETTSCSSCHHHHHHHHHHHHHT----CCCEEEEEECGGGSC-------- T ss_pred EEEEECCCH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC----CCEEEEEEECCCCCC-------- T ss_conf 999717555-8999999998877544443322001211102678999999740----880566551135545-------- Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 115788999999999998829415885256531355566778888753001247 Q Fun_Sc_NP_0140 159 WQSVHIDFILQTLRSFCYFNDSSLFYICEDHTEEKREEAQRLKYQELLKHFCED 212 (312) Q Consensus 159 w~de~fDfIqQ~LRtvcL~yGASLiYts~ts~~~~kn~~~~l~y~~L~~h~l~~ 212 (312) .+.++-..+.+|...-.++..=+-.-+.|+.+..|...++.. +...+.+ T Consensus 147 --~~~~~~~~~~~~~~~~~~~~~~~~ii~vSA~~G~gid~L~~~---I~~~iPt 195 (195) T d1kk1a3 147 --KEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVKA---IEDFIPT 195 (195) T ss_dssp --HHHHHHHHHHHHHHHTTSTTTTCCEEECBTTTTBSHHHHHHH---HHHHSCC T ss_pred --HHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHH---HHHHCCC T ss_conf --568999999999987431788703898306678998999999---9974689 No 43 >d1azsc2 c.37.1.8 (C:36-66,C:202-393) Transducin (alpha subunit) {Cow (Bos taurus)} Probab=88.80 E-value=2.9 Score=18.48 Aligned_columns=113 Identities=10% Q ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCC Q ss_conf 64438997598331799999851477865566557502563356212133268899860785435887887718778782 Q Fun_Sc_NP_0140 24 ATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKV 103 (312) Q Consensus 24 ~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~ 103 (312) ++--++++|....||++|++++ -+.+......|.....+.+.. ..+..|-..|.-.... ....--..-. T Consensus 4 ~~~KI~llG~~nvGKSSlln~l--~~~~~~~~T~g~~~~~i~~~~-----~~~~i~D~~G~~~~~~----~~~~~~~~~~ 72 (223) T d1azsc2 4 ATHRLLLLGAGESGKSTIVKQM--RILHVNVLTSGIFETKFQVDK-----VNFHMFDVGGQRDERR----KWIQCFNDVT 72 (223) T ss_dssp TEEEEEEEESTTSSHHHHHHHH--HHHHCCCCCCSEEEEEEEETT-----EEEEEEEECCSGGGGG----GGGGGTTTCC T ss_pred CCCEEEEEECCCCCHHHHHHHH--HCCCCEEEECCEEEEEEEECC-----EEEEEEEECCCHHHHH----HHHHHHHHHH T ss_conf 5203899845998799999988--357612100140799999736-----8999987224013334----5565421003 Q ss_pred EEEEEECCCCCCHHH-------HHHHHHHHHHHH--HCCCCCCCEEEEEECCC Q ss_conf 799985166634468-------999999999986--40689987389984773 Q Fun_Sc_NP_0140 104 RWLILLDWTLNDQKL-------WLNELSYAFNKI--KQLNDDNEFSVWCLNSG 147 (312) Q Consensus 104 l~ViLLDWs~~Dp~~-------Wlr~Lr~~~~~L--~~l~~Dt~i~VVc~~sD 147 (312) .++++.|-+.-++.. ++..-...|..+ .....+.++.+|.-|+| T Consensus 73 ~ii~v~~~s~~~~~l~~d~~~~~~~es~~l~~~i~~~~~~~~~piIlvlNK~D 125 (223) T d1azsc2 73 AIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQD 125 (223) T ss_dssp EEEEEEETTGGGCBCTTTSCSBHHHHHHHHHHHHHTCTTCSSCCEEEEEECHH T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCH T ss_conf 43345466556766544214665489999999985260006884899983410 No 44 >d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus)} Probab=87.24 E-value=3.3 Score=18.14 Aligned_columns=157 Identities=12% Q ss_pred HHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC-CCEEEEECCCCCCCCCE-EEEEEEEECCCHHH Q ss_conf 86410114655366443899759833179999985147786556655-75025633562121332-68899860785435 Q Fun_Sc_NP_0140 11 LSQNESTINSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT-LINYATIGWTNDLKENY-SVDVYTLIRNTDDA 88 (312) Q Consensus 11 Lse~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~-~L~y~y~~v~~d~~d~~-R~~vy~L~~~~~~~ 88 (312) ++...........+..++.|.|.++.||.+|++.+.-.+.++..-.. |.--++.+...--..+. .+.+|=+-|-..-. T Consensus 42 ~s~i~e~l~~~e~~~l~IAIiG~snaGKSSLINAL~G~~~~e~~~a~tgv~~tT~~~~~y~~~~~~~v~LvDTPGig~~~ 121 (400) T d1tq4a_ 42 NSAISDALKEIDSSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIGSTN 121 (400) T ss_dssp HHHHHHHHHHHHHCCEEEEEEECTTSSHHHHHHHHHTCCTTSTTSCCCCC----CCCEEEECSSCTTEEEEECCCGGGSS T ss_pred HHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCC T ss_conf 99999999851688378998724898599999988468855566666889887554413444688606898738898635 Q ss_pred HHHHHHHHCCCC-CCCEEEEEECCCCCCH-HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHH Q ss_conf 887887718778-7827999851666344-68999999999986406899873899847734566553245411578899 Q Fun_Sc_NP_0140 89 LDLLKPFLQEHS-SKVRWLILLDWTLNDQ-KLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDF 166 (312) Q Consensus 89 ~~LLkp~L~~~s-~~~l~ViLLDWs~~Dp-~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDf 166 (312) ..--+.+-.... .-..|+|..|-.--++ ...++.+.++ ..++.+|.+|.|....-|++. .=++..-.= T Consensus 122 ~~~~~yL~~~~~~~~Dl~Iivss~~~te~D~~la~~I~~~---------gK~fiiV~nKiD~dl~~e~~~-k~~~f~~ek 191 (400) T d1tq4a_ 122 FPPDTYLEKMKFYEYDFFIIISATRFKKNDIDIAKAISMM---------KKEFYFVRTKVDSDITNEADG-EPQTFDKEK 191 (400) T ss_dssp CCHHHHHHHTTGGGCSEEEEEESSCCCHHHHHHHHHHHHT---------TCEEEEEECCHHHHHHHHHTT-CCTTCCHHH T ss_pred CCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHC---------CCCEEEEEECCCCCCCCHHHC-CCCCCCHHH T ss_conf 4489999999754872799873888757789999999973---------898999973455334884441-555577768 Q ss_pred HHHHHHHHHHH Q ss_conf 99999999988 Q Fun_Sc_NP_0140 167 ILQTLRSFCYF 177 (312) Q Consensus 167 IqQ~LRtvcL~ 177 (312) +.|.+|..|.+ T Consensus 192 ~Lq~Ir~~~~~ 202 (400) T d1tq4a_ 192 VLQDIRLNCVN 202 (400) T ss_dssp HHHHHHHHHHH T ss_pred HHHHHHHHHHH T ss_conf 99999999999 No 45 >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori} Probab=87.14 E-value=0.95 Score=21.25 Aligned_columns=76 Identities=14% Q ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCE-EEEEEEEECCCHHHHHHHHHHHCCCCCC Q ss_conf 644389975983317999998514778655665575025633562121332-6889986078543588788771877878 Q Fun_Sc_NP_0140 24 ATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENY-SVDVYTLIRNTDDALDLLKPFLQEHSSK 102 (312) Q Consensus 24 ~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~-R~~vy~L~~~~~~~~~LLkp~L~~~s~~ 102 (312) +.+|++|+|++++|||+|++-+ .+..-+..-+ .++-=+.|..-.. +.-+-...+....+.++++.+|. ++|+ T Consensus 165 ~~~nIlIsG~tgSGKTT~l~al----~~~i~~~~ri--vtiEd~~El~l~~~~~~~~~~~~~~~~~~~~l~~~lR-~~Pd 237 (323) T d1g6oa_ 165 IGKNVIVCGGTGSGKTTYIKSI----MEFIPKEERI--ISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLR-MRPD 237 (323) T ss_dssp HTCCEEEEESTTSSHHHHHHHH----GGGSCTTCCE--EEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTT-SCCS T ss_pred CCCCEEEECCCCCHHHHHHHHH----HHHCCCCCCE--EEEECCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHH-CCCC T ss_conf 6897999838997479999999----9724999858--9984745431278870478603567778999999962-4998 Q ss_pred CEEE Q ss_conf 2799 Q Fun_Sc_NP_0140 103 VRWL 106 (312) Q Consensus 103 ~l~V 106 (312) ..+| T Consensus 238 ~iiv 241 (323) T d1g6oa_ 238 RIIL 241 (323) T ss_dssp EEEE T ss_pred EEEE T ss_conf 8998 No 46 >d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima} Probab=86.34 E-value=3.6 Score=17.88 Aligned_columns=162 Identities=10% Q ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC----CCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHH Q ss_conf 4655366443899759833179999985147786556655----750256335621213326889986078543588788 Q Fun_Sc_NP_0140 18 INSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT----LINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLK 93 (312) Q Consensus 18 ~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~----~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLk 93 (312) |--+.....++.++|....||++|++.+.........+.. ...+..+.+... ...+.+.|.-.....+. T Consensus 1 s~p~~~~~ikI~iiG~~~~GKSTLin~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~-------~~~~~Dt~G~~~~~~~~ 73 (186) T d1mkya2 1 SKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGR-------KYVFVDTAGLRRKSRVE 73 (186) T ss_dssp SCCCCCSCEEEEEECSTTSSHHHHHHHHHTSTTEEECCC------CCCEEEEETTE-------EEEESSCSCC------- T ss_pred CCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCCEEEEEEEEEECCCCCC-------EEEEECCCCCCCCCHHH T ss_conf 98754367379998349998889999984442213105523455541010111112-------24784168741001011 Q ss_pred H----------HHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHH Q ss_conf 7----------718778782799985166634468999999999986406899873899847734566553245411578 Q Fun_Sc_NP_0140 94 P----------FLQEHSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVH 163 (312) Q Consensus 94 p----------~L~~~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~ 163 (312) . .+..-..-..+++++|=+. -+.++...+...++..+ .++++|..|+|.+..-++..- T Consensus 74 ~~~~~~~~~~~~~~~~~~~div~~vid~~~----~~~~~~~~~~~~~~~~~--~p~iiv~NK~Dli~~~~~~~~------ 141 (186) T d1mkya2 74 PRTVEKYSNYRVVDSIEKADVVVIVLDATQ----GITRQDQRMAGLMERRG--RASVVVFNKWDLVVHREKRYD------ 141 (186) T ss_dssp ----CCSCCHHHHHHHHHCSEEEEEEETTT----CCCHHHHHHHHHHHHTT--CEEEEEEECGGGSTTGGGCHH------ T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEECCCC----CCHHHHHHHHHHHHHHH--HHHHHHCCCCCCCCCCHHHHH------ T ss_conf 223434555555566543024202321667----72045799999877500--012221231013343034799------ Q ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHH Q ss_conf 899999999999882941588525653135556677888 Q Fun_Sc_NP_0140 164 IDFILQTLRSFCYFNDSSLFYICEDHTEEKREEAQRLKY 202 (312) Q Consensus 164 fDfIqQ~LRtvcL~yGASLiYts~ts~~~~kn~~~~l~y 202 (312) ++....-..+........+++ |+++..|-..++.. T Consensus 142 -~~~~~~~~~~~~~~~~~i~~~---SA~tg~gi~~l~~~ 176 (186) T d1mkya2 142 -EFTKLFREKLYFIDYSPLIFT---SADKGWNIDRMIDA 176 (186) T ss_dssp -HHHHHHHHHCGGGTTSCEEEC---BTTTTBSHHHHHHH T ss_pred -HHHHHHHHHHHHCCCCCEEEE---ECCCCCCHHHHHHH T ss_conf -999999988521489867997---34679888899999 No 47 >d1rfla_ c.37.1.8 (A:) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli} Probab=86.28 E-value=0.39 Score=23.50 Aligned_columns=119 Identities=12% Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCC-HHHHHHHHHHHCCCC-CCC- Q ss_conf 38997598331799999851477865566557502563356212133268899860785-435887887718778-782- Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNT-DDALDLLKPFLQEHS-SKV- 103 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~-~~~~~LLkp~L~~~s-~~~- 103 (312) .++++|....||++|++.+.........+.++....+....-. .++.++.++ +.|. ....+.......... ... T Consensus 9 kI~ivG~~~~GKStLin~l~~~~~~~~~~~~~~t~~~~~~~~~-~~~~~~~i~--DtpG~~~~~~~~~~~~~~~~~~~i~ 85 (172) T d1rfla_ 9 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIH-IDGMPLHII--DTAGLREASDEVERIGIERAWQEIE 85 (172) T ss_dssp EEEECSSSSSSSHHHHHHHSSCSSCCCCCCSSCCTTCCCSCCC-CSSCSSCCC--CCCCSHHHHHHHHHHTSCCSCCCCC T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEC-CCCCHHHHH--CCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 7999824999789999998567530321235532111256520-220023220--3566310220123211000123332 Q ss_pred ---EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH Q ss_conf ---799985166634468999999999986406899873899847734566 Q Fun_Sc_NP_0140 104 ---RWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILN 151 (312) Q Consensus 104 ---l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~ 151 (312) .+++++|-+..+.. ...+.|...++....+.++++|..|+|-+.. T Consensus 86 ~~d~ii~viD~~~~~~~---~~~~~~~~~~~~~~~~~piiiv~NK~Dl~~~ 133 (172) T d1rfla_ 86 QADRVLFMVDGTTTDAV---DPAEIWPEFIARLPAKLPITVVRNKADITGE 133 (172) T ss_dssp CEEEEECCCCTTCCCST---THHHHHHHHSSSSCCCCEECCCSCHHHHGGG T ss_pred HCCCEEEEEECCCCCCH---HHHHHHHHHHHHHHCCCCEEEEECCCCCCHH T ss_conf 03724899867888874---4689999999873069728996042265223 No 48 >d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli} Probab=85.98 E-value=32 Score=12.36 Aligned_columns=168 Identities=8% Q ss_pred CCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCC- Q ss_conf 4438997598331799999851477865566557502563356212133268899860785435887887718778782- Q Fun_Sc_NP_0140 25 TITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKV- 103 (312) Q Consensus 25 ~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~- 103 (312) +..+.++|....||++|++++........-+..+.-........+ .++.++.+|=..|=......-....+....... T Consensus 5 ~~~I~iiG~~n~GKSSLin~l~~~~~~~~~~~~~tt~~~~~~~~~-~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~~ 83 (179) T d1egaa1 5 CGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHT-EGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSI 83 (179) T ss_dssp EEEEEEECSSSSSHHHHHHHHHTCSEEECCCCSSCCSSCEEEEEE-ETTEEEEEESSSSCCHHHHHHHHHHHTCCTTSCC T ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCEEEEEEEEEEE-ECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH T ss_conf 536899835999788999998567401211556256650056774-1100011015787520122222233322332223 Q ss_pred ----EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC Q ss_conf ----7999851666344689999999999864068998738998477345665532454115788999999999998829 Q Fun_Sc_NP_0140 104 ----RWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFND 179 (312) Q Consensus 104 ----l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yG 179 (312) .+++++|=+ .+.++-......++..+ -++++|..|+|-+..- .-+...+.....+.+ T Consensus 84 ~~~d~vi~vvD~~-----~~~~~~~~~~~~~~~~~--~piIiv~NK~D~~~~~------------~~~~~~~~~~~~~~~ 144 (179) T d1egaa1 84 GDVELVIFVVEGT-----RWTPDDEMVLNKLREGK--APVILAVNKVDNVQEK------------ADLLPHLQFLASQMN 144 (179) T ss_dssp CCEEEEEEEEETT-----CCCHHHHHHHHHHHSSS--SCEEEEEESTTTCCCH------------HHHHHHHHHHHTTSC T ss_pred HHHHHHHHHCCCC-----CCCHHHHHHHHHHHHCC--CCEEEECCCCCCCCCH------------HHHHHHHHHHHHHCC T ss_conf 3232200000256-----64024566655555306--7253310562331365------------578899999998359 Q ss_pred -CEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC Q ss_conf -415885256531355566778888753001247787752 Q Fun_Sc_NP_0140 180 -SSLFYICEDHTEEKREEAQRLKYQELLKHFCEDRDMKDH 218 (312) Q Consensus 180 -ASLiYts~ts~~~~kn~~~~l~y~~L~~h~l~~~~~~~~ 218 (312) +..+.+ |+.+..|...++.. +...+..-++--| T Consensus 145 ~~~~~~i---SA~~~~gi~~l~~~---i~~~lpe~~~~~p 178 (179) T d1egaa1 145 FLDIVPI---SAETGLNVDTIAAI---VRKHLPEATHHFP 178 (179) T ss_dssp CSEEEEC---CTTTTTTHHHHHHH---HHTTCCBCCCSSC T ss_pred CCCEEEE---ECCCCCCHHHHHHH---HHHHCCCCCCCCC T ss_conf 9867997---33568888899999---9986777889888 No 49 >d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus} Probab=85.72 E-value=0.22 Score=24.94 Aligned_columns=24 Identities=8% Q ss_pred CCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 366443899759833179999985 Q Fun_Sc_NP_0140 22 ETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 22 ~~~~k~~lilg~~~~~~~~fi~~l 45 (312) .|+++.+.++|+|++||||+++.+ T Consensus 3 ~p~Geii~lvG~sGaGKTTl~~~L 26 (207) T d1okkd2 3 EPKGRVVLVVGVNGVGKTTTIAKL 26 (207) T ss_dssp CCSSSEEEEECSTTSSHHHHHHHH T ss_pred CCCCEEEEEECCCCCCHHHHHHHH T ss_conf 999538998758999789999998 No 50 >d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis} Probab=84.38 E-value=14 Score=14.54 Aligned_columns=160 Identities=15% Q ss_pred EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCC---CEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCC Q ss_conf 38997598331799999851477865566557---502563356212133268899860785435887887718778782 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFPEGSNSILDTTL---INYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKV 103 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~---L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~ 103 (312) ++.++|....||+++++.+.........+..+ ..+.+..+.--.-+.....+.+.+.|... ++.+-....-+.-- T Consensus 7 ~I~iiG~~naGKSTLin~L~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~i~iiDtpG~~--~~~~~~~~~~~~~D 84 (179) T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRITLVDAPGHA--DLIRAVVSAADIID 84 (179) T ss_dssp EEEEEECTTSSHHHHHHHHHTTC--------------------CCCEEEETTEEEEECCCSSHH--HHHHHHHHHTTSCC T ss_pred EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEECCEEEEEECCCCC--HHHHHHHHHHHCCE T ss_conf 6899841898888999999763101012553120000246641123311112128997176630--24566666643150 Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC----C Q ss_conf 799985166634468999999999986406899873899847734566553245411578899999999999882----9 Q Fun_Sc_NP_0140 104 RWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFN----D 179 (312) Q Consensus 104 l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~y----G 179 (312) .+++++|=.. .-..+-.+.+..++..+- ++++|..|.|.... ++..++-+-++.+.-.. + T Consensus 85 ~vi~vid~~~----~~~~~~~e~~~~~~~~~~--p~iiviNK~Dl~~~----------~~~~~~~~~~~~~~~~~~~~~~ 148 (179) T d1wb1a4 85 LALIVVDAKE----GPKTQTGEHMLILDHFNI--PIIVVITKSDNAGT----------EEIKRTEMIMKSILQSTHNLKN 148 (179) T ss_dssp EEEEEEETTT----CSCHHHHHHHHHHHHTTC--CBCEEEECTTSSCH----------HHHHHHHHHHHHHHHHSSSGGG T ss_pred EEEEEEECCC----CCCCCHHHHHHHHHHCCC--CEEEEECCCCCCCC----------CHHHHHHHHHHHHHHHHCCCCC T ss_conf 5788740545----534103899999985057--14887215124687----------7889999999998865317898 Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHHHHCC Q ss_conf 4158852565313555667788887530012 Q Fun_Sc_NP_0140 180 SSLFYICEDHTEEKREEAQRLKYQELLKHFC 210 (312) Q Consensus 180 ASLiYts~ts~~~~kn~~~~l~y~~L~~h~l 210 (312) ...+.+ |+.+..|...++.. +++.+ T Consensus 149 ~~~~~~---SA~~g~gi~eL~~~---i~~~l 173 (179) T d1wb1a4 149 SSIIPI---SAKTGFGVDELKNL---IITTL 173 (179) T ss_dssp CCEEEC---CTTTCTTHHHHHHH---HHHHH T ss_pred CCEEEE---ECCCCCCHHHHHHH---HHHHC T ss_conf 437884---05679998999999---99755 No 51 >d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus} Probab=79.71 E-value=30 Score=12.54 Aligned_columns=161 Identities=8% Q ss_pred CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHH Q ss_conf 01146553664438997598331799999851477865566557502563356212133268899860785435887887 Q Fun_Sc_NP_0140 15 ESTINSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKP 94 (312) Q Consensus 15 ~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp 94 (312) +....+-.+++.-++|+|+.+.|||+|.-++ ++-.............|.+.+....-....+.. T Consensus 26 D~~l~GGl~~G~i~~i~G~pGsGKT~l~l~~----------------a~~~~~~~~~~~~~~~vlyi~~e~~~~~~rl~~ 89 (254) T d1pzna2 26 DKLLGGGIETQAITEVFGEFGSGKTQLAHTL----------------AVMVQLPPEEGGLNGSVIWIDTENTFRPERIRE 89 (254) T ss_dssp HHHHTSSEESSEEEEEEESTTSSHHHHHHHH----------------HHHTTSCGGGTSCSCEEEEEESSSCCCHHHHHH T ss_pred HHHHCCCCCCCEEEEEECCCCCCHHHHHHHH----------------HHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHH T ss_conf 9985188546748999648875289999999----------------999972021234573589972555135899999 Q ss_pred HHCCCCCC-----CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHH--HHHH Q ss_conf 71877878-----2799985166634468999999999986406899873899847734566553245411578--8999 Q Fun_Sc_NP_0140 95 FLQEHSSK-----VRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVH--IDFI 167 (312) Q Consensus 95 ~L~~~s~~-----~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~--fDfI 167 (312) ......-+ ....+.--.+..++-..+.........+.....+-.++|+=.=+......+.......+.+ +..+ T Consensus 90 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvVIDsi~~~~~~~~~~~~~~~~~~~~~~~~ 169 (254) T d1pzna2 90 IAQNRGLDPDEVLKHIYVARAFNSNHQMLLVQQAEDKIKELLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKH 169 (254) T ss_dssp HHHTTTCCHHHHGGGEEEEECCSHHHHHHHHHHHHHHHHHSSSSSSCEEEEEEETSSTTHHHHCCSTTTHHHHHHHHHHH T ss_pred HHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCHHHCCCCCHHHHHHHHHHH T ss_conf 99871889899864443101246431466799999999999872179328997100221011103677435899999999 Q ss_pred HHHHHHHHHHCCCEEEEECCCCCH Q ss_conf 999999998829415885256531 Q Fun_Sc_NP_0140 168 LQTLRSFCYFNDSSLFYICEDHTE 191 (312) Q Consensus 168 qQ~LRtvcL~yGASLiYts~ts~~ 191 (312) .+.|+.++-.||++.+.|+..+.+ T Consensus 170 ~~~L~~la~~~~~~vv~~~qv~~~ 193 (254) T d1pzna2 170 LADLHRLANLYDIAVFVTNQVQAR 193 (254) T ss_dssp HHHHHHHHHHTTCEEEEEEECC-- T ss_pred HHHHHHHHHHCCCEEEEEEEEEEC T ss_conf 999999998559879998013424 No 52 >d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis} Probab=78.98 E-value=0.79 Score=21.71 Aligned_columns=35 Identities=9% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 5366443899759833179999985147786556655 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) +..+++.+.|+|+|++||+++++.+ -|..++..|. T Consensus 24 ~i~~Ge~v~iiG~nGsGKSTLl~~l--~g~~~~~~G~ 58 (242) T d1mv5a_ 24 EAQPNSIIAFAGPSGGGKSTIFSLL--ERFYQPTAGE 58 (242) T ss_dssp EECTTEEEEEECCTTSSHHHHHHHH--TTSSCCSBSC T ss_pred EECCCCEEEEECCCCCCHHHHHHHH--HHHHCCCCCE T ss_conf 6638848999717999789999999--8863067877 No 53 >d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=78.82 E-value=57 Score=10.92 Aligned_columns=153 Identities=10% Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEE-EEECCCCCCCCCE-EEEEEE Q ss_conf 61388998864101146553664438997598331799999851477865566557502-5633562121332-688998 Q Fun_Sc_NP_0140 3 NCNAWDKLLSQNESTINSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINY-ATIGWTNDLKENY-SVDVYT 80 (312) Q Consensus 3 ~~NlWs~iLse~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y-~y~~v~~d~~d~~-R~~vy~ 80 (312) |+..-+.+| .+-.+++.-++|+|+.+.|||+|.-++.........-+..=+. .|++.-..-.... + T Consensus 19 G~~~LD~lL-------~GGi~~G~lt~I~G~~GsGKT~l~l~l~~~~~~~~~~~~~~~~vlyi~~E~~~~~~rl~----- 86 (251) T d1szpa2 19 GSKNLDTLL-------GGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLV----- 86 (251) T ss_dssp SCHHHHHHH-------TSSEESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGGGH----- T ss_pred CCHHHHHHH-------CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHH----- T ss_conf 866899984-------38864674899965888778899999999998421015678579998245730279999----- Q ss_pred EECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCC Q ss_conf 60785435887887718778782799985166634468999999999986406899873899847734566553245411 Q Fun_Sc_NP_0140 81 LIRNTDDALDLLKPFLQEHSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQ 160 (312) Q Consensus 81 L~~~~~~~~~LLkp~L~~~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~ 160 (312) ...-+.-..++..-..+.+.-.=+.++.-..+..+++.+.. .++-+|+. |.+..+-+... .. T Consensus 87 --------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~liVI--Dsi~~l~~~~~-~~ 148 (251) T d1szpa2 87 --------SIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQMMSE-------SRFSLIVV--DSVMALYRTDF-SG 148 (251) T ss_dssp --------HHHHHTCCCHHHHGGGEEEEECCSTTTHHHHHHHTHHHHHH-------SCEEEEEE--ETGGGGGSCC---- T ss_pred --------HHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH-------CCCCEEEE--ECHHHHHHHCC-CC T ss_conf --------99987077635665210112316535699999999999972-------79728998--41123311003-67 Q ss_pred HHH-------HHHHHHHHHHHHHHCCCEEEEE Q ss_conf 578-------8999999999998829415885 Q Fun_Sc_NP_0140 161 SVH-------IDFILQTLRSFCYFNDSSLFYI 185 (312) Q Consensus 161 de~-------fDfIqQ~LRtvcL~yGASLiYt 185 (312) ++. +.-+.+.||.++-+||.+.+.| T Consensus 149 ~~~~~~r~~~l~~~~~~L~~la~~~~v~vvvt 180 (251) T d1szpa2 149 RGELSARQMHLAKFMRALQRLADQFGVAVVVT 180 (251) T ss_dssp --CTHHHHHHHHHHHHHHHHHHHHHCCCEEEE T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE T ss_conf 77657899999999999999998649879998 No 54 >d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima} Probab=78.35 E-value=0.73 Score=21.90 Aligned_columns=33 Identities=6% Q ss_pred CCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 66443899759833179999985147786556655 Q Fun_Sc_NP_0140 23 TATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 23 ~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) .+++.+-++|+|++||+++++-+ -|.-++..|. T Consensus 26 ~~Gei~~llG~nGsGKSTLl~~l--~G~~~p~~G~ 58 (238) T d1vpla_ 26 EEGEIFGLIGPNGAGKTTTLRII--STLIKPSSGI 58 (238) T ss_dssp CTTCEEEEECCTTSSHHHHHHHH--TTSSCCSEEE T ss_pred CCCEEEEEECCCCCCHHHHHHHH--HCCCCCCCCE T ss_conf 28618999727998789999998--6036887776 No 55 >d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium} Probab=76.98 E-value=0.81 Score=21.67 Aligned_columns=35 Identities=11% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 5366443899759833179999985147786556655 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) +..+++-+-|.|+|++||++|++.+ -|...+..|. T Consensus 24 ~v~~Gei~giiG~nGsGKSTLlk~i--~G~~~p~~G~ 58 (258) T d1b0ua_ 24 QARAGDVISIIGSSGSGKSTFLRCI--NFLEKPSEGA 58 (258) T ss_dssp EECTTCEEEEECCTTSSHHHHHHHH--TTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHH--HHCCCCCCCC T ss_conf 5638707999737898789999999--7404756785 No 56 >d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens)} Probab=76.96 E-value=5.6 Score=16.78 Aligned_columns=134 Identities=9% Q ss_pred HHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC-CCEEEEECCC-------------------CCCC Q ss_conf 6410114655366443899759833179999985147786556655-7502563356-------------------2121 Q Fun_Sc_NP_0140 12 SQNESTINSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT-LINYATIGWT-------------------NDLK 71 (312) Q Consensus 12 se~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~-~L~y~y~~v~-------------------~d~~ 71 (312) .+-+...+|-.|+++.++|+|+.+.|||+|.-++..........+. +....|++.- .+.. T Consensus 24 ~~lD~lL~GGl~~G~i~~i~G~pGsGKT~l~l~~~~~~~~~~~~~~~~~~v~yi~~e~~~~~~rl~~~~~~~~~~~~~~~ 103 (258) T d1v5wa_ 24 QEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVL 103 (258) T ss_dssp HHHHHHTTSSBCSSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHHHHHHHHHHTTCCHHHHH T ss_pred HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHH T ss_conf 68999852884467589996489750899999999999711223456846999835774018999999987188878977 Q ss_pred CCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCC---------CCCHHHHHHHHHHHHHHHHCCCCCCCEEEE Q ss_conf 33268899860785435887887718778782799985166---------634468999999999986406899873899 Q Fun_Sc_NP_0140 72 ENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWLILLDWT---------LNDQKLWLNELSYAFNKIKQLNDDNEFSVW 142 (312) Q Consensus 72 d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~ViLLDWs---------~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VV 142 (312) ++..+....-.+...+..+-+...+..+......|++-.-+ ..+-..=.+.++.-+..|+.+..+..+.|+ T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lvviDsi~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~la~~~~~~vi 183 (258) T d1v5wa_ 104 DNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVF 183 (258) T ss_dssp HTEEEEECCSTTHHHHHHHHHHHHHHHSCSSEEEEEEETSGGGHHHHCCGGGCHHHHHHHHHHHHHHHHHHHHHHTCEEE T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE T ss_conf 45542110786689999999999998624885599985010110000267774368999999999999999986498699 Q ss_pred EEC Q ss_conf 847 Q Fun_Sc_NP_0140 143 CLN 145 (312) Q Consensus 143 c~~ 145 (312) ++| T Consensus 184 ~~n 186 (258) T d1v5wa_ 184 VTN 186 (258) T ss_dssp EEE T ss_pred EEE T ss_conf 980 No 57 >d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis} Probab=76.13 E-value=4 Score=17.61 Aligned_columns=178 Identities=8% Q ss_pred EEEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCCCCCE-EEEEEEEECCCHHHHHHHHHHHCCCCCCCE Q ss_conf 389975983317999998514-778655665575025633562121332-688998607854358878877187787827 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFP-EGSNSILDTTLINYATIGWTNDLKENY-SVDVYTLIRNTDDALDLLKPFLQEHSSKVR 104 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~-~~~e~~~~~~~L~y~y~~v~~d~~d~~-R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l 104 (312) ++-+.|....||++|++.+.. ........+.........+........ .++.+-..+..................... T Consensus 3 ~I~iiG~~nvGKSsLin~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 82 (185) T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRV 82 (185) T ss_dssp CEEEESSTTSSHHHHHHHSEEECCEESSTTSSCCCCCEEEEECSSSCEEEEEEHHHHHHHTTCTTTTHHHHHHHHHHCCE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEEEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 16887469986899999985685213204664025788788751671110012344321001235688999886412235 Q ss_pred EEEEECCCCCCHHHHHHH---HHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCE Q ss_conf 999851666344689999---99999986406899873899847734566553245411578899999999999882941 Q Fun_Sc_NP_0140 105 WLILLDWTLNDQKLWLNE---LSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTLRSFCYFNDSS 181 (312) Q Consensus 105 ~ViLLDWs~~Dp~~Wlr~---Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~LRtvcL~yGAS 181 (312) +++++|-+....+....+ ++.+...........++++++.|+|....-+. +..+....+.. T Consensus 83 i~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~nK~Dl~~~~~~----------------~~~~~~~~~~~ 146 (185) T d1lnza2 83 IVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKMDMPEAAEN----------------LEAFKEKLTDD 146 (185) T ss_dssp EEEEEESSCSSCCCHHHHHHHHHHHHHHSCSSTTTSCBCBEEECTTSTTHHHH----------------HHHHHHHCCSC T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH----------------HHHHHHHHCCC T ss_conf 65553200024666178999998777777665421112344311101113778----------------99999984179 Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE Q ss_conf 5885256531355566778888753001247787752240 Q Fun_Sc_NP_0140 182 LFYICEDHTEEKREEAQRLKYQELLKHFCEDRDMKDHIEM 221 (312) Q Consensus 182 LiYts~ts~~~~kn~~~~l~y~~L~~h~l~~~~~~~~a~v 221 (312) .-+ -++|+.+..+...++.+-.-.+.....+|....-.+ T Consensus 147 ~~v-~~~SA~tg~Gi~el~~~i~~~l~~~~~~~~~~e~~~ 185 (185) T d1lnza2 147 YPV-FPISAVTREGLRELLFEVANQLENTPEFPLYDEEEL 185 (185) T ss_dssp CCB-CCCSSCCSSTTHHHHHHHHHHHTSCCCCCSSCSCCC T ss_pred CCE-EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC T ss_conf 968-997357788888999999997340788889871349 No 58 >d1fts_2 c.37.1.10 (285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli} Probab=74.79 E-value=0.99 Score=21.16 Aligned_columns=28 Identities=11% Q ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 4655366443899759833179999985 Q Fun_Sc_NP_0140 18 INSTETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 18 ~~~k~~~~k~~lilg~~~~~~~~fi~~l 45 (312) +|=+-++++-+.++|+|++||+|+++.+ T Consensus 2 lnL~i~~g~vv~ivG~sGsGKSTll~~L 29 (211) T d1fts_2 2 LNVEGKAPFVILMVGVNGVGKTTTIGKL 29 (211) T ss_dssp CCCCSCTTEEEEEECCTTSSHHHHHHHH T ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHH T ss_conf 7765588758999737999789999998 No 59 >d1pf4a1 c.37.1.12 (A:321-564) Multidrug resistance ABC transporter MsbA, C-terminal domain {Vibrio cholerae} Probab=74.06 E-value=0.56 Score=22.61 Aligned_columns=35 Identities=11% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 5366443899759833179999985147786556655 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) +..+++.+.|+|+|++||+++++-+ -|..++..|. T Consensus 45 ~i~~Ge~~~i~G~sGsGKSTLl~~l--~G~~~p~~G~ 79 (244) T d1pf4a1 45 SIPQGKTVALVGRSGSGKSTIANLF--TRFYDVDSGS 79 (244) T ss_dssp ECCTTCCCCCCCSCSSHHHHHHHHT--SSSSCCSSSC T ss_pred EECCCCEEEEECCCCCCHHHHHHHH--HHHCCCCCCC T ss_conf 6648848999848998789999998--7415845340 No 60 >d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens)} Probab=73.52 E-value=5.2 Score=16.95 Aligned_columns=134 Identities=12% Q ss_pred HHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCC----------------CCCCCE Q ss_conf 641011465536644389975983317999998514-778655665575025633562----------------121332 Q Fun_Sc_NP_0140 12 SQNESTINSTETATITAIIYSPSSKTLHQFINICFP-EGSNSILDTTLINYATIGWTN----------------DLKENY 74 (312) Q Consensus 12 se~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l~~-~~~e~~~~~~~L~y~y~~v~~----------------d~~d~~ 74 (312) .+-+.-..+-.+++.-++|+|+.+.|||+|.-++.. --......+.+-...|++-.. +..+-+ T Consensus 10 ~~LD~lL~GGl~~G~it~I~G~pGsGKT~l~lqla~~~~~~~~~~~~~~~vlyi~~E~~~~~~rl~~~~~~~~~~~~~~l 89 (242) T d1n0wa_ 10 KELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVL 89 (242) T ss_dssp HHHHHHTTTSEETTSEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSSCCCHHHHHHHHHHTTCCHHHHH T ss_pred HHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHH T ss_conf 78999853884257389997489865889999999999721000112734899854662358999999986498888986 Q ss_pred EEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEEEC----------CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE Q ss_conf 688998607854358878877187787827999851----------6663446899999999998640689987389984 Q Fun_Sc_NP_0140 75 SVDVYTLIRNTDDALDLLKPFLQEHSSKVRWLILLD----------WTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCL 144 (312) Q Consensus 75 R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~ViLLD----------Ws~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~ 144 (312) .--.+.-..+.++...++.-+-..-.....-++.+| ....+-..=.+.++.....|+.+..+..+.||++ T Consensus 90 ~~i~~~~~~~~~~~~~~l~~l~~~i~~~~~~lvVIDsi~~~~~~~~~~~~~~~~r~~~l~~~~~~L~~lA~~~~~~Vvvt 169 (242) T d1n0wa_ 90 DNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVIT 169 (242) T ss_dssp HTEEEEECCSHHHHHHHHHHHHHHHHHSCEEEEEEETSSGGGC-------CHHHHHHHHHHHHHHHHHHHHHHCCEEEEE T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEE T ss_conf 44320245883558999999999998528965887410012122115777557999999999999999998659869998 Q ss_pred C Q ss_conf 7 Q Fun_Sc_NP_0140 145 N 145 (312) Q Consensus 145 ~ 145 (312) | T Consensus 170 n 170 (242) T d1n0wa_ 170 N 170 (242) T ss_dssp C T ss_pred C T ss_conf 2 No 61 >d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus)} Probab=73.12 E-value=0.85 Score=21.52 Aligned_columns=35 Identities=6% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 5366443899759833179999985147786556655 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) +..+++.+-|+|+|+.||+++++.+ -|-.++..|. T Consensus 58 ~i~~Ge~v~IiG~nGsGKSTLl~~l--~Gl~~~~~g~ 92 (281) T d1r0wa_ 58 NIEKGEMLAITGSTGSGKTSLLMLI--LGELEASEGI 92 (281) T ss_dssp EECTTCEEEEEESTTSSHHHHHHHH--HTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHH--HCCCCCCCCC T ss_conf 6538858999738999789999998--4014744220 No 62 >d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens)} Probab=72.37 E-value=1.2 Score=20.65 Aligned_columns=35 Identities=6% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 5366443899759833179999985147786556655 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) +-.+++.+-|+|+|++||+++++.+ -|...+..|. T Consensus 36 ~i~~Ge~~~iiG~nGsGKSTLl~~i--~Gl~~p~~G~ 70 (251) T d1jj7a_ 36 TLRPGEVTALVGPNGSGKSTVAALL--QNLYQPTGGQ 70 (251) T ss_dssp EECTTCEEEEECSTTSSHHHHHHHH--TTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHH--HHCCCCCCCE T ss_conf 6538848999748998789999998--6203899988 No 63 >d1mt0a_ c.37.1.12 (A:) Haemolysin B ATP-binding protein {Escherichia coli} Probab=71.85 E-value=0.89 Score=21.42 Aligned_columns=33 Identities=6% Q ss_pred CCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 66443899759833179999985147786556655 Q Fun_Sc_NP_0140 23 TATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 23 ~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) .+++-+.|+|+|+.||+++++-+ -|..++..|. T Consensus 27 ~~Ge~~~i~G~nGsGKSTLl~~l--~Gl~~p~~G~ 59 (241) T d1mt0a_ 27 KQGEVIGIVGRSGSGKSTLTKLI--QRFYIPENGQ 59 (241) T ss_dssp CTTCEEEEECSTTSSGGGHHHHH--TTSSCCSEEE T ss_pred CCCCEEEEECCCCCCHHHHHHHH--HHHCCCCCCE T ss_conf 48858999738998689999999--7311477776 No 64 >d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima} Probab=71.35 E-value=1.1 Score=20.83 Aligned_columns=112 Identities=16% Q ss_pred EEEECCCCHHHHHHHHHHCC--CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHH--HHHHCCCCCCC Q ss_conf 89975983317999998514--778655665575025633562121332688998607854358878--87718778782 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFP--EGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLL--KPFLQEHSSKV 103 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~--~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LL--kp~L~~~s~~~ 103 (312) ++++|....||++|++++.. ........+.........+..+.....-++......+.....+.. .-++..-..-. T Consensus 3 I~liG~~~~GKSTLin~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 82 (160) T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSETNDLVERLGIERTLQEIEKAD 82 (160) T ss_dssp EEEECCHHHHTCHHHHHHHHHTBCCCCCSSCCSSCSCCEEEEETTEEEEEEESSCCCSSCCTTCCCCCHHHHHHHHHHCS T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 88983399988899999846742143011110100001001115302577631011113430122333678999986354 Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC Q ss_conf 79998516663446899999999998640689987389984773 Q Fun_Sc_NP_0140 104 RWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSG 147 (312) Q Consensus 104 l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD 147 (312) .+++++|=+. ++. ++...+...++ +.++++|..|+| T Consensus 83 ~ii~vvD~~~--~~~--~~~~~~~~~l~----~~~~iiv~NK~D 118 (160) T d1xzpa2 83 IVLFVLDASS--PLD--EEDRKILERIK----NKRYLVVINKVD 118 (160) T ss_dssp EEEEEEETTS--CCC--HHHHHHHHHHT----TSSEEEEEEECS T ss_pred EEEEEECCCC--CCC--HHHHHHHHHHC----CCCEEEEEECCC T ss_conf 1478641521--114--56788886413----675589972566 No 65 >d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus} Probab=70.78 E-value=1.2 Score=20.71 Aligned_columns=35 Identities=9% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 5366443899759833179999985147786556655 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) ...+++-+.+.|+|+.||+++++.+ -|--.+..|. T Consensus 23 ~i~~Gei~~i~G~nGaGKSTLl~~i--~G~~~p~~G~ 57 (200) T d1sgwa_ 23 TIEKGNVVNFHGPNGIGKTTLLKTI--STYLKPLKGE 57 (200) T ss_dssp EEETTCCEEEECCTTSSHHHHHHHH--TTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHH--HCCCCCCCCE T ss_conf 7648818999727999779999997--3278867556 No 66 >d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139} Probab=70.70 E-value=1.3 Score=20.55 Aligned_columns=35 Identities=3% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 5366443899759833179999985147786556655 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) +...++-+-++|+|++||++|++.+ -|..++..|. T Consensus 28 ~i~~Gei~~liG~nGaGKSTll~~i--~G~~~p~~G~ 62 (240) T d1ji0a_ 28 KVPRGQIVTLIGANGAGKTTTLSAI--AGLVRAQKGK 62 (240) T ss_dssp EEETTCEEEEECSTTSSHHHHHHHH--TTSSCCSEEE T ss_pred EECCCEEEEEECCCCCCHHHHHHHH--HHCCCCCCCE T ss_conf 5538618999737999789999999--7215766774 No 67 >d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii} Probab=68.50 E-value=1.4 Score=20.31 Aligned_columns=35 Identities=11% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 5366443899759833179999985147786556655 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) +..+++-+-+.|+|+.||+++++.+ -|..++..|. T Consensus 28 ~v~~Gei~gliG~nGaGKSTLl~~l--~Gl~~p~~G~ 62 (239) T d1v43a3 28 TIKDGEFLVLLGPSGCGKTTTLRMI--AGLEEPTEGR 62 (239) T ss_dssp EECTTCEEEEECCTTSSHHHHHHHH--HTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHH--HCCCCCCCCE T ss_conf 5638708999716898589999987--0676666677 No 68 >d1q12a2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli} Probab=67.49 E-value=1.7 Score=19.84 Aligned_columns=35 Identities=11% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 5366443899759833179999985147786556655 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) +..+++.+-++|+|+.||+++++.+ -|..++..|. T Consensus 22 ~i~~Gei~~iiG~nGaGKSTllk~i--~G~~~p~~G~ 56 (232) T d1q12a2 22 DIHEGEFVVFVGPSGCGKSTLLRMI--AGLETITSGD 56 (232) T ss_dssp CCCTTCEEEEECSTTSSHHHHHHHH--HSSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHH--HHCCCCCCCE T ss_conf 5648708999737898789999999--7204656886 No 69 >d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii} Probab=67.36 E-value=1.8 Score=19.65 Aligned_columns=35 Identities=14% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 5366443899759833179999985147786556655 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) ...+++.+-|.|+|+.||++|++.+ -|..++..|. T Consensus 27 ~i~~Ge~~~iiG~sGsGKSTL~~~l--~gl~~p~~G~ 61 (230) T d1l2ta_ 27 NIKEGEFVSIMGPSGSGKSTMLNII--GCLDKPTEGE 61 (230) T ss_dssp EECTTCEEEEECSTTSSHHHHHHHH--TTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHH--HHCCCCCCCE T ss_conf 6648728999726998789999998--6205766875 No 70 >d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus} Probab=66.20 E-value=1.6 Score=19.99 Aligned_columns=35 Identities=17% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 5366443899759833179999985147786556655 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) +..+++.+-++|+|+.||+++++-+ -|...+..|. T Consensus 27 ~i~~Gei~~liG~nGaGKSTll~~l--~Gl~~p~~G~ 61 (242) T d1oxxk2 27 NIENGERFGILGPSGAGKTTFMRII--AGLDVPSTGE 61 (242) T ss_dssp EECTTCEEEEECSCHHHHHHHHHHH--HTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHH--HCCCCCCCCE T ss_conf 5648718999727898689999998--5168887777 No 71 >d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii} Probab=66.00 E-value=1.9 Score=19.49 Aligned_columns=38 Identities=13% Q ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 4655366443899759833179999985147786556655 Q Fun_Sc_NP_0140 18 INSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 18 ~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) .|=+..+++.+-+.|+|++||+++++.+ -|...+..|. T Consensus 23 isl~i~~Gei~~liG~nGaGKSTL~~~i--~G~~~p~~G~ 60 (254) T d1g6ha_ 23 VSISVNKGDVTLIIGPNGSGKSTLINVI--TGFLKADEGR 60 (254) T ss_dssp ECCEEETTCEEEEECSTTSSHHHHHHHH--TTSSCCSEEE T ss_pred CCEEECCCEEEEEECCCCCCHHHHHHHH--HCCCCCCCCE T ss_conf 4315638718999737898789999997--0787777677 No 72 >d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis} Probab=60.54 E-value=2.4 Score=18.96 Aligned_columns=32 Identities=13% Q ss_pred CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC Q ss_conf 6443899759833179999985147786556655 Q Fun_Sc_NP_0140 24 ATITAIIYSPSSKTLHQFINICFPEGSNSILDTT 57 (312) Q Consensus 24 ~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~ 57 (312) +++-+-+.|+|++||+++++.+ -|..++..|. T Consensus 28 ~Gei~~iiG~nGaGKSTLl~~l--~Gl~~p~~G~ 59 (240) T d1g2912 28 DGEFMILLGPSGCGKTTTLRMI--AGLEEPSRGQ 59 (240) T ss_dssp TTCEEEEECSTTSSHHHHHHHH--HTSSCCSEEE T ss_pred CCCEEEEECCCCCCHHHHHHHH--HHCCCCCCCC T ss_conf 8708999747898689999999--6015755771 No 73 >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae} Probab=60.42 E-value=8.2 Score=15.83 Aligned_columns=73 Identities=12% Q ss_pred EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEE Q ss_conf 8997598331799999851477865566557502563356212133268899860785435887887718778782799 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHSSKVRWL 106 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s~~~l~V 106 (312) +|++|++++||++++..+...-...-++. .++-=+-|+.-..-.-+.+-.+....|+..++-+|- +.|+..+| T Consensus 161 ilisG~tgSGKTT~l~a~l~~~~~~~~~i-----~tiEdp~E~~~~~~~q~~v~~~~~~~~~~~l~~~LR-~dPDvi~v 233 (401) T d1p9ra_ 161 ILVTGPTGSGKSTTLYAGLQELNSSERNI-----LTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILR-QDPDVVMV 233 (401) T ss_dssp EEEECSTTSCHHHHHHHHHHHHCCTTSCE-----EEEESSCCSCCSSSEEEECBGGGTBCHHHHHHHHGG-GCCSEEEE T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCEE-----EEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH-CCCCEEEE T ss_conf 99971788646899999999608888779-----996355231479961477147787308999999984-28988998 No 74 >d1s4qa_ c.37.1.1 (A:) Guanylate kinase {Mycobacterium tuberculosis} Probab=59.40 E-value=2.5 Score=18.87 Aligned_columns=21 Identities=10% Q ss_pred CCEEEEECCCCHHHHHHHHHH Q ss_conf 443899759833179999985 Q Fun_Sc_NP_0140 25 TITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 25 ~k~~lilg~~~~~~~~fi~~l 45 (312) ++-+.|.|+|+.||+|+++.+ T Consensus 2 G~ii~iiGpsGaGKsTL~~~l 22 (183) T d1s4qa_ 2 GRVVVLSGPSAVGKSTVVRCL 22 (183) T ss_dssp CCEEEEECSTTSSHHHHHHHH T ss_pred CEEEEEECCCCCCHHHHHHHH T ss_conf 468999768998788999999 No 75 >d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae} Probab=58.69 E-value=5.2 Score=16.96 Aligned_columns=38 Identities=13% Q ss_pred HHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 38899886410114655366443899759833179999985 Q Fun_Sc_NP_0140 5 NAWDKLLSQNESTINSTETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 5 NlWs~iLse~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l 45 (312) |-|.-+- -.......+..+|+|++||++.|||.+-+.+ T Consensus 32 n~~~r~~---~~~~~~~~~~pkniLl~GPtGtGKT~LAkal 69 (443) T d1g41a_ 32 NRWRRMQ---LQEPLRHEVTPKNILMIGPTGVGKTEIARRL 69 (443) T ss_dssp HHHHHHH---SCTTTTTTCCCCCEEEECCTTSSHHHHHHHH T ss_pred HHHHHHH---CCCCCCCCCCCCEEEEECCCCCCHHHHHHHH T ss_conf 5677753---3566777625521588678898578999999 No 76 >d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2)} Probab=57.55 E-value=2.5 Score=18.80 Aligned_columns=31 Identities=6% Q ss_pred CCCCCCCCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 0114655366443899759833179999985 Q Fun_Sc_NP_0140 15 ESTINSTETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 15 ~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l 45 (312) +....|-.|++..++|.|+.+.||++|..++ T Consensus 16 D~~L~GGl~~G~~~~i~G~~GsGKT~l~~~~ 46 (242) T d1tf7a1 16 DDISHGGLPIGRSTLVSGTSGTGKTLFSIQF 46 (242) T ss_dssp HHHTTSSEETTSEEEEEESTTSSHHHHHHHH T ss_pred HHHHCCCCCCCEEEEEEECCCCCHHHHHHHH T ss_conf 9984288435717999708987789999999 No 77 >d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus} Probab=56.66 E-value=3.5 Score=17.98 Aligned_columns=25 Identities=4% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 5366443899759833179999985 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l 45 (312) ..+..+++|++|+.|.|||++.+.+ T Consensus 38 ~~~~~~~iLl~GppGtGKT~la~~l 62 (247) T d1ixza_ 38 GARIPKGVLLVGPPGVGKTHLARAV 62 (247) T ss_dssp TCCCCSEEEEECCTTSSHHHHHHHH T ss_pred CCCCCCCEEEECCCCCCHHHHHHHH T ss_conf 8998872687668765267999999 No 78 >d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens)} Probab=55.58 E-value=3.2 Score=18.21 Aligned_columns=21 Identities=10% Q ss_pred CCEEEEECCCCHHHHHHHHHH Q ss_conf 443899759833179999985 Q Fun_Sc_NP_0140 25 TITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 25 ~k~~lilg~~~~~~~~fi~~l 45 (312) .|-++|+|+++.||+++++.+ T Consensus 3 ~k~ivi~GPSG~GK~tl~~~l 23 (178) T d1kgda_ 3 RKTLVLLGAHGVGRRHIKNTL 23 (178) T ss_dssp CCEEEEECCTTSSHHHHHHHH T ss_pred CCEEEEECCCCCCHHHHHHHH T ss_conf 654889827887788999999 No 79 >d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2)} Probab=54.83 E-value=2.6 Score=18.76 Aligned_columns=56 Identities=0% Q ss_pred HHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCC Q ss_conf 64101146553664438997598331799999851477865566557502563356212 Q Fun_Sc_NP_0140 12 SQNESTINSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDL 70 (312) Q Consensus 12 se~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~ 70 (312) .+-+....+-.+++..++|.|+.+.||++|..++...++ +++...-|+...-+.++ T Consensus 13 ~~LD~~l~GGl~~G~~~lI~G~pGsGKT~l~~~~~~~~l---~~g~~v~yis~e~~~~~ 68 (242) T d1tf7a2 13 VRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENAC---ANKERAILFAYEESRAQ 68 (242) T ss_dssp HHHHHHTTSSEESSCEEEEEECTTSSHHHHHHHHHHHHH---TTTCCEEEEESSSCHHH T ss_pred HHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH---HCCCCEEEEECCCCHHH T ss_conf 799998438932571799971898568999999999999---55895999975799899 No 80 >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae)} Probab=49.10 E-value=26 Score=12.90 Aligned_columns=143 Identities=13% Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCC Q ss_conf 53664438997598331799999851477865566557502563356212133268899860785435887887718778 Q Fun_Sc_NP_0140 21 TETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENYSVDVYTLIRNTDDALDLLKPFLQEHS 100 (312) Q Consensus 21 k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~R~~vy~L~~~~~~~~~LLkp~L~~~s 100 (312) |.....++|+.|+.|.|||++...+ .-+-..+..+..+..++..++ .........+..+.+... T Consensus 32 ~~~~~~~iLl~GppG~GKT~la~~l---a~~l~~~~~~~~~~e~~~s~~-------------~~~~~~~~~~~~~~~~~~ 95 (224) T d1sxjb2 32 KDGNMPHMIISGMPGIGKTTSVHCL---AHELLGRSYADGVLELNASDD-------------RGIDVVRNQIKHFAQKKL 95 (224) T ss_dssp HSCCCCCEEEECSTTSSHHHHHHHH---HHHHHGGGHHHHEEEECTTSC-------------CSHHHHHTHHHHHHHBCC T ss_pred HHCCCCEEEEECCCCCCHHHHHHHH---HHHHHHHHCCHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHH T ss_conf 7089975888779886499999999---998865310002233210023-------------334467788888876532 Q ss_pred ---CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHH---CCCCCCHHHHHHHHHHHHHH Q ss_conf ---782799985166634468999999999986406899873899847734566553---24541157889999999999 Q Fun_Sc_NP_0140 101 ---SKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQR---HTTVWQSVHIDFILQTLRSF 174 (312) Q Consensus 101 ---~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEK---e~~~w~de~fDfIqQ~LRtv 174 (312) +...-|+++|=. ...+...-..-...++.....+.+...+...+.+..--+ .....+.-.-+.+.+.|+.+ T Consensus 96 ~~~~~~~~il~iDEi---d~l~~~~~~~l~~~le~~~~~~~~i~~~~~~~~~~~~l~sR~~~i~f~~~~~~~~~~~l~~i 172 (224) T d1sxjb2 96 HLPPGKHKIVILDEA---DSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQI 172 (224) T ss_dssp CCCTTCCEEEEEESG---GGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHH T ss_pred HCCCCCCEEEEEECH---HHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHH T ss_conf 024566368887330---34678889888888850012002221001022225046776676530378989999999986 Q ss_pred HHHCCCEE Q ss_conf 98829415 Q Fun_Sc_NP_0140 175 CYFNDSSL 182 (312) Q Consensus 175 cL~yGASL 182 (312) |-+.|..+ T Consensus 173 ~~~e~i~~ 180 (224) T d1sxjb2 173 IKLEDVKY 180 (224) T ss_dssp HHHHTCCB T ss_pred HHHCCCCC T ss_conf 44217888 No 81 >d1dar_2 c.37.1.8 (1-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus} Probab=47.85 E-value=13 Score=14.74 Aligned_columns=114 Identities=8% Q ss_pred EEEEECCCCHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCCCC------------CEEEEEEEEECCCHHHHHHHH Q ss_conf 389975983317999998514-7786556655750256335621213------------326889986078543588788 Q Fun_Sc_NP_0140 27 TAIIYSPSSKTLHQFINICFP-EGSNSILDTTLINYATIGWTNDLKE------------NYSVDVYTLIRNTDDALDLLK 93 (312) Q Consensus 27 ~~lilg~~~~~~~~fi~~l~~-~~~e~~~~~~~L~y~y~~v~~d~~d------------~~R~~vy~L~~~~~~~~~LLk 93 (312) |+-|.|....|||+|+..++. -|..+-....--+..+.++..+-++ +.+-.-+.+...++| .++.. T Consensus 14 ni~iiGh~~~GKTTL~e~ll~~~g~i~~~g~v~~~~~~~D~~~~E~~r~~si~~~~~~~~~~~~~i~~iDtPGh-~df~~ 92 (282) T d1dar_2 14 NIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINIIDTPGH-VDFTI 92 (282) T ss_dssp EEEEEECTTSCHHHHHHHHHHHHCC----------------------------CCEEEEEETTEEEEEECCCSS-TTCHH T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHCCCCEEEEEEEEECCCCEEEEEECCCC-HHHHH T ss_conf 68999423898789999999861123443334420110311156541477221002454015757899846873-46799 Q ss_pred HHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC Q ss_conf 771877878279998516663446899999999998640689987389984773 Q Fun_Sc_NP_0140 94 PFLQEHSSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSG 147 (312) Q Consensus 94 p~L~~~s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD 147 (312) -....-.----.|+++|=.. -...|-+..|..++..+. +++|++.|-| T Consensus 93 e~~~al~~~D~ailVida~~----Gv~~qT~~~~~~~~~~~i--p~ii~iNK~D 140 (282) T d1dar_2 93 EVERSMRVLDGAIVVFDSSQ----GVEPQSETVWRQAEKYKV--PRIAFANKMD 140 (282) T ss_dssp HHHHHHHHCSEEEEEEETTT----CSCHHHHHHHHHHHHTTC--CEEEEEECTT T ss_pred HHHHHHHHHCEEEEEEECCC----CCCCHHHHHHHHHHHCCC--CEEEEEECCC T ss_conf 99999886261677775466----524057999999996479--8799985127 No 82 >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major} Probab=47.06 E-value=5.8 Score=16.70 Aligned_columns=24 Identities=8% Q ss_pred CCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 366443899759833179999985 Q Fun_Sc_NP_0140 22 ETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 22 ~~~~k~~lilg~~~~~~~~fi~~l 45 (312) +|.+.++++.|..++||++.-+.+ T Consensus 2 ~~kg~~I~i~G~~GsGKTTia~~L 25 (174) T d1y63a_ 2 QPKGINILITGTPGTGKTSMAEMI 25 (174) T ss_dssp CCSSCEEEEECSTTSSHHHHHHHH T ss_pred CCCCCEEEEECCCCCCHHHHHHHH T ss_conf 888755888779999867899999 No 83 >d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli} Probab=45.02 E-value=5.8 Score=16.68 Aligned_columns=21 Identities=19% Q ss_pred CCEEEEECCCCHHHHHHHHHH Q ss_conf 443899759833179999985 Q Fun_Sc_NP_0140 25 TITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 25 ~k~~lilg~~~~~~~~fi~~l 45 (312) ++-++|+|+++.||+++++.+ T Consensus 2 g~livi~GPSG~GK~tl~~~l 22 (205) T d1s96a_ 2 GTLYIVSAPSGAGKSSLIQAL 22 (205) T ss_dssp CCEEEEECCTTSCHHHHHHHH T ss_pred CEEEEEECCCCCCHHHHHHHH T ss_conf 578999748888888999999 No 84 >d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus)} Probab=43.95 E-value=5.9 Score=16.65 Aligned_columns=27 Identities=15% Q ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 655366443899759833179999985 Q Fun_Sc_NP_0140 19 NSTETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 19 ~~k~~~~k~~lilg~~~~~~~~fi~~l 45 (312) +++..+..++|++|+.+.|||.+...+ T Consensus 34 ~~~~~p~~siLl~GppGtGKT~lakal 60 (246) T d1d2na_ 34 NSDRTPLVSVLLEGPPHSGKTALAAKI 60 (246) T ss_dssp HCSSCSEEEEEEECSTTSSHHHHHHHH T ss_pred CCCCCCCCEEEEECCCCCHHHHHHHHH T ss_conf 135788655888748975489999999 No 85 >d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus)} Probab=43.39 E-value=7.3 Score=16.12 Aligned_columns=24 Identities=8% Q ss_pred CCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 366443899759833179999985 Q Fun_Sc_NP_0140 22 ETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 22 ~~~~k~~lilg~~~~~~~~fi~~l 45 (312) .+..+++|++|+.+.|||.+.+.+ T Consensus 35 ~~~~~giLl~GppGtGKT~la~~i 58 (258) T d1e32a2 35 VKPPRGILLYGPPGTGKTLIARAV 58 (258) T ss_dssp CCCCCEEEEECCTTSSHHHHHHHH T ss_pred CCCCCEEEEECCCCCCHHHHHHHH T ss_conf 998771788779997366999999 No 86 >d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli} Probab=41.73 E-value=4.1 Score=17.59 Aligned_columns=28 Identities=7% Q ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 4655366443899759833179999985 Q Fun_Sc_NP_0140 18 INSTETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 18 ~~~k~~~~k~~lilg~~~~~~~~fi~~l 45 (312) .|-+..+++-+-+.|+|++||+++++.+ T Consensus 18 isl~i~~Gei~~iiG~nGaGKSTLl~~l 45 (231) T d1l7vc_ 18 LSGEVRAGEILHLVGPNGAGKSTLLARM 45 (231) T ss_dssp EEEEEETTCEEECBCCTTSSHHHHHHHH T ss_pred CCEEECCCCEEEEECCCCCCHHHHHHHH T ss_conf 4304628718999858998689999998 No 87 >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)} Probab=41.60 E-value=6.4 Score=16.47 Aligned_columns=20 Identities=10% Q ss_pred CEEEEECCCCHHHHHHHHHH Q ss_conf 43899759833179999985 Q Fun_Sc_NP_0140 26 ITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 26 k~~lilg~~~~~~~~fi~~l 45 (312) +.++|+|+++.||+++++.+ T Consensus 1 r~ivi~GpsG~GK~tl~~~l 20 (190) T d1lvga_ 1 RPVVLSGPSGAGKSTLLKKL 20 (190) T ss_dssp CCEEEECCTTSSHHHHHHHH T ss_pred CEEEEECCCCCCHHHHHHHH T ss_conf 92889707877788999999 No 88 >d1gky__ c.37.1.1 (-) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae)} Probab=40.66 E-value=7 Score=16.24 Aligned_columns=21 Identities=14% Q ss_pred CCEEEEECCCCHHHHHHHHHH Q ss_conf 443899759833179999985 Q Fun_Sc_NP_0140 25 TITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 25 ~k~~lilg~~~~~~~~fi~~l 45 (312) ...++|.|+++.||+++.+.+ T Consensus 1 ~R~Ivi~GPsG~GK~tl~~~l 21 (186) T d1gky__ 1 SRPIVISGPSGTGKSTLLKKL 21 (186) T ss_dssp CCCEEEECCTTSSHHHHHHHH T ss_pred CCEEEEEECCCCCHHHHHHHH T ss_conf 935899727887788999999 No 89 >d1cr1a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7} Probab=39.70 E-value=29 Score=12.67 Aligned_columns=156 Identities=11% Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCE-EEEEEEEECCCHHHHHHHHHHHCCC- Q ss_conf 36644389975983317999998514778655665575025633562121332-6889986078543588788771877- Q Fun_Sc_NP_0140 22 ETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIGWTNDLKENY-SVDVYTLIRNTDDALDLLKPFLQEH- 99 (312) Q Consensus 22 ~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~~d~~d~~-R~~vy~L~~~~~~~~~LLkp~L~~~- 99 (312) ..++.-++|.|+++.|||+|..++ +-......|..-+|...-...++-. |+..-...-+.......-....... T Consensus 32 ~~~G~l~~i~G~pG~GKT~l~l~l----a~~~a~~~g~~v~~~s~E~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~ 107 (277) T d1cr1a_ 32 ARGGEVIMVTSGSGMGKSTFVRQQ----ALQWGTAMGKKVGLAMLEESVEETAEDLIGLHNRVRLRQSDSLKREIIENGK 107 (277) T ss_dssp BCTTCEEEEEESTTSSHHHHHHHH----HHHHHHTSCCCEEEEESSSCHHHHHHHHHHHHTTSCGGGCHHHHHHHHHHTH T ss_pred CCCCEEEEEECCCCHHHHHHHHHH----HHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH T ss_conf 647827999659870079999999----9999983799429998325658999999987624652322211000123889 Q ss_pred --------CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHH Q ss_conf --------878279998516663446899999999998640689987389984773456655324541157889999999 Q Fun_Sc_NP_0140 100 --------SSKVRWLILLDWTLNDQKLWLNELSYAFNKIKQLNDDNEFSVWCLNSGEILNLQRHTTVWQSVHIDFILQTL 171 (312) Q Consensus 100 --------s~~~l~ViLLDWs~~Dp~~Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~i~~LEKe~~~w~de~fDfIqQ~L 171 (312) ...-.+.+.-+....++-..+..++......+.. +||.=.-..|..-+.... +.+.++-+.+.| T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------lvvID~l~~l~~~~~~~~--~~~~i~~~~~~L 179 (277) T d1cr1a_ 108 FDQWFDELFGNDTFHLYDSFAEAETDRLLAKLAYMRSGLGCD------VIILDHISIVVSASGESD--ERKMIDNLMTKL 179 (277) T ss_dssp HHHHHHHHHSSSCEEEECCCCSCCHHHHHHHHHHHHHTSCCS------EEEEEEEEC------------CHHHHHHHHHH T ss_pred HHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCC------EEEEEEHHHHHCCCCCCC--HHHHHHHHHHHH T ss_conf 999999975015542423645678899999999999834986------899860112222566552--689999999999 Q ss_pred HHHHHHCCCEEEEECCCC Q ss_conf 999988294158852565 Q Fun_Sc_NP_0140 172 RSFCYFNDSSLFYICEDH 189 (312) Q Consensus 172 RtvcL~yGASLiYts~ts 189 (312) |.++-.||...+.++..+ T Consensus 180 ~~lA~~~~v~vi~v~q~~ 197 (277) T d1cr1a_ 180 KGFAKSTGVVLVVICHLK 197 (277) T ss_dssp HHHHHHHCCEEEEEEECC T ss_pred HHHHHHCCCEEEEECCCC T ss_conf 999986598799951545 No 90 >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli} Probab=39.02 E-value=7.1 Score=16.19 Aligned_columns=18 Identities=6% Q ss_pred EEEECCCCHHHHHHHHHH Q ss_conf 899759833179999985 Q Fun_Sc_NP_0140 28 AIIYSPSSKTLHQFINIC 45 (312) Q Consensus 28 ~lilg~~~~~~~~fi~~l 45 (312) +-|.|.+++||||+++.+ T Consensus 5 v~i~G~~GSGKTTLl~~L 22 (170) T d1np6a_ 5 LAFAAWSGTGKTTLLKKL 22 (170) T ss_dssp EEEECCTTSCHHHHHHHH T ss_pred EEEECCCCCCHHHHHHHH T ss_conf 999736999878999999 No 91 >d1t4ga2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae} Probab=38.93 E-value=7.4 Score=16.10 Aligned_columns=31 Identities=6% Q ss_pred CCCCCCCCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 0114655366443899759833179999985 Q Fun_Sc_NP_0140 15 ESTINSTETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 15 ~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l 45 (312) +....+-.+++.-++|+|+.+.|||+|.-++ T Consensus 24 D~lL~GGl~~G~i~~i~G~~G~GKT~l~l~~ 54 (258) T d1t4ga2 24 DSVLGGGLESQSVTEFAGVFGSGKTQIMHQS 54 (258) T ss_dssp HHHTTTSEEBTSEEEEEESTTSSHHHHHHHH T ss_pred HHHHCCCCCCCEEEEEECCCCCCHHHHHHHH T ss_conf 9884488335738999628987288999999 No 92 >d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae} Probab=37.21 E-value=9.3 Score=15.51 Aligned_columns=22 Identities=18% Q ss_pred CCCEEEEECCCCHHHHHHHHHH Q ss_conf 6443899759833179999985 Q Fun_Sc_NP_0140 24 ATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 24 ~~k~~lilg~~~~~~~~fi~~l 45 (312) ..+.+.+-|+++.||+|+++.+ T Consensus 6 ~~~~I~i~G~~g~GKSTL~n~L 27 (192) T d1lw7a2 6 FAKTVAILGGESSGKSVLVNKL 27 (192) T ss_dssp TCEEEEEECCTTSHHHHHHHHH T ss_pred CCCEEEEECCCCCCHHHHHHHH T ss_conf 6407888738998788999999 No 93 >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae} Probab=35.40 E-value=10 Score=15.28 Aligned_columns=21 Identities=0% Q ss_pred CCEEEEECCCCHHHHHHHHHH Q ss_conf 443899759833179999985 Q Fun_Sc_NP_0140 25 TITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 25 ~k~~lilg~~~~~~~~fi~~l 45 (312) +|-++|.|+++.||+|+.+.+ T Consensus 1 ~KvI~i~G~~GsGKtT~~~~l 21 (190) T d1khta_ 1 NKVVVVTGVPGVGSTTSSQLA 21 (190) T ss_dssp CCEEEEECCTTSCHHHHHHHH T ss_pred CEEEEEECCCCCCHHHHHHHH T ss_conf 948899768999878999999 No 94 >d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli} Probab=34.97 E-value=9.2 Score=15.55 Aligned_columns=24 Identities=13% Q ss_pred CCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 366443899759833179999985 Q Fun_Sc_NP_0140 22 ETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 22 ~~~~k~~lilg~~~~~~~~fi~~l 45 (312) .+++..+.|+|+++.||++++..+ T Consensus 26 l~~G~v~~l~G~~G~GKStL~~~l 49 (274) T d1nlfa_ 26 MVAGTVGALVSPGGAGKSMLALQL 49 (274) T ss_dssp EETTSEEEEEESTTSSHHHHHHHH T ss_pred CCCCEEEEEEECCCCCHHHHHHHH T ss_conf 567658999708998889999999 No 95 >d1ogsa2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens)} Probab=34.45 E-value=41 Score=11.79 Aligned_columns=135 Identities=18% Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC-------------CCCCCCEEEEEEEEECCCHHH-HHHHHHHHCCC Q ss_conf 8331799999851477865566557502563356-------------212133268899860785435-88788771877 Q Fun_Sc_NP_0140 34 SSKTLHQFINICFPEGSNSILDTTLINYATIGWT-------------NDLKENYSVDVYTLIRNTDDA-LDLLKPFLQEH 99 (312) Q Consensus 34 ~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~v~-------------~d~~d~~R~~vy~L~~~~~~~-~~LLkp~L~~~ 99 (312) +++.+.++++.++.+. |+||...-++ +|..+|..++-..+..+.... ++++|-++.-. T Consensus 20 ~~~~r~~ll~~lF~~~--------G~g~s~~R~~IGssDfs~~~ysy~d~~~D~~l~~Fs~~~~d~~~~ip~ik~a~~~~ 91 (354) T d1ogsa2 20 SPPAQNLLLKSYFSEE--------GIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLA 91 (354) T ss_dssp CHHHHHHHHHHHHSTT--------TTCCCEEEEEESCCSSSSSCCCSCCSSSCTTCTTCCCCHHHHTTHHHHHHHHHHHC T ss_pred CHHHHHHHHHHHCCCC--------CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH T ss_conf 9989999999844887--------76158898400566677887554788858885656478887762437899999972 Q ss_pred CCCCEEEEEECCCCCCH-HH-----------------------HHHHHHHHHHHHHCCCCCCCEEEEEECCCH--HHHHH Q ss_conf 87827999851666344-68-----------------------999999999986406899873899847734--56655 Q Fun_Sc_NP_0140 100 SSKVRWLILLDWTLNDQ-KL-----------------------WLNELSYAFNKIKQLNDDNEFSVWCLNSGE--ILNLQ 153 (312) Q Consensus 100 s~~~l~ViLLDWs~~Dp-~~-----------------------Wlr~Lr~~~~~L~~l~~Dt~i~VVc~~sD~--i~~LE 153 (312) .++.+ |+.-.||- | |- |++-+...+...++.+.+--.+-+-=-+++ +..-- T Consensus 92 n~~lk-i~aspWSp--P~WMKtn~~~~ggg~l~~~l~~~~y~~yA~Yl~k~i~ay~~~Gi~i~ait~qNEP~~~~~~~~~ 168 (354) T d1ogsa2 92 QRPVS-LLASPWTS--PTWLKTNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYP 168 (354) T ss_dssp SSCCE-EEEEESCC--CGGGBTTCSSSSSCBBSSCTTSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSTTGGGSTTCC T ss_pred CCCEE-EEEECCCC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC T ss_conf 89828-99715888--4001468721355656777652127999999999999999649706774024672234467887 Q ss_pred HCCCCCC-HHHHHHHHHHHHHHHHHCC Q ss_conf 3245411-5788999999999998829 Q Fun_Sc_NP_0140 154 RHTTVWQ-SVHIDFILQTLRSFCYFND 179 (312) Q Consensus 154 Ke~~~w~-de~fDfIqQ~LRtvcL~yG 179 (312) -.-+.|. +++=|||..+||..+-..| T Consensus 169 ~~sm~~~~~~~~~fi~~~Lgp~l~~~g 195 (354) T d1ogsa2 169 FQCLGFTPEHQRDFIARDLGPTLANST 195 (354) T ss_dssp SCCCBCCHHHHHHHHHHTHHHHHHTST T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCC T ss_conf 461203989999999998679999647 No 96 >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus)} Probab=34.45 E-value=11 Score=15.08 Aligned_columns=24 Identities=13% Q ss_pred CCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 366443899759833179999985 Q Fun_Sc_NP_0140 22 ETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 22 ~~~~k~~lilg~~~~~~~~fi~~l 45 (312) .+..+.+|++|+.|.|||.+...+ T Consensus 38 ~~~~~giLL~GppGtGKT~la~ai 61 (265) T d1r7ra3 38 MTPSKGVLFYGPPGCGKTLLAKAI 61 (265) T ss_dssp CCCCCEEEEBCCTTSSHHHHHHHH T ss_pred CCCCCEEEEECCCCCCHHHHHHHH T ss_conf 998761788788897689999999 No 97 >d1ak2_1 c.37.1.1 (14-146,177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2} Probab=34.35 E-value=12 Score=14.87 Aligned_columns=23 Identities=9% Q ss_pred CCCCEEEEECCCCHHHHHHHHHH Q ss_conf 66443899759833179999985 Q Fun_Sc_NP_0140 23 TATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 23 ~~~k~~lilg~~~~~~~~fi~~l 45 (312) |.+.-+++.|+++.||++..+.| T Consensus 1 ~kg~~Ivl~G~~GsGKsT~~~~L 23 (190) T d1ak2_1 1 PKGVRAVLLGPPGAGKGTQAPKL 23 (190) T ss_dssp CCCCEEEEECCTTSSHHHHHHHH T ss_pred CCCCEEEEECCCCCCHHHHHHHH T ss_conf 99617888758999878899999 No 98 >d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus} Probab=34.30 E-value=19 Score=13.64 Aligned_columns=43 Identities=5% Q ss_pred CCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 6138899886410114655366443899759833179999985 Q Fun_Sc_NP_0140 3 NCNAWDKLLSQNESTINSTETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 3 ~~NlWs~iLse~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l 45 (312) ||.-=...|..--..+.....+..++|++|+.|.|||++.+.+ T Consensus 13 Gq~~~~~~l~~~l~~~~~~~~~~~~vLl~GppGtGKT~~a~~i 55 (239) T d1ixsb2 13 GQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVI 55 (239) T ss_dssp SCHHHHHHHHHHHHHHTTSSSCCCCEEEECCTTSCHHHHHHHH T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH T ss_conf 8289999999999988727877787688788998788999999 No 99 >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum} Probab=34.26 E-value=16 Score=14.21 Aligned_columns=54 Identities=9% Q ss_pred HHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC Q ss_conf 9988641011465536644389975983317999998514778655665575025633 Q Fun_Sc_NP_0140 8 DKLLSQNESTINSTETATITAIIYSPSSKTLHQFINICFPEGSNSILDTTLINYATIG 65 (312) Q Consensus 8 s~iLse~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l~~~~~e~~~~~~~L~y~y~~ 65 (312) ..+.+--+....+......++++.|+.+.|||++++.+ .+...+..+..|.|.+ T Consensus 26 ~~l~~~l~~~~~~~~~~~~~ili~GppGtGKT~~~r~l----a~~l~~~~~~~~~~~~ 79 (276) T d1fnna2 26 QQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKL----WELYKDKTTARFVYIN 79 (276) T ss_dssp HHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHH----HHHHTTSCCCEEEEEE T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHH----HHHHHHHCCCCEEECC T ss_conf 99999999997435766673788789998389999999----9985520588333037 No 100 >d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus} Probab=34.21 E-value=18 Score=13.91 Aligned_columns=36 Identities=8% Q ss_pred HHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH Q ss_conf 8899886410114655366443899759833179999985 Q Fun_Sc_NP_0140 6 AWDKLLSQNESTINSTETATITAIIYSPSSKTLHQFINIC 45 (312) Q Consensus 6 lWs~iLse~~~~~~~k~~~~k~~lilg~~~~~~~~fi~~l 45 (312) .|..++.+....+++..| ++|.||.+.||+.+-+-+ T Consensus 8 ~~~~l~~~~~~~a~~~~p----vlI~Ge~GtGK~~lAr~i 43 (247) T d1ny5a2 8 KMKEILEKIKKISCAECP----VLITGESGVGKEVVARLI 43 (247) T ss_dssp HHHHHHHHHHHHTTCCSC----EEEECSTTSSHHHHHHHH T ss_pred HHHHHHHHHHHHHCCCCC----EEEECCCCCCHHHHHHHH T ss_conf 999999999997436983----798768997289999999 Done!