Query Ver_Hs_NP_057092.2_Lic3 Command /cluster/toolkit/production/bioprogs/hhpred/hhsearch -cal -cpu 4 -v 1 -i /cluster/toolkit/production/tmp/production/96185/s_NP_057092.hhm -d /cluster/toolkit/production/databases/hhpred/new_dbs/scop70_1.71/db/scop.hhm -o /cluster/toolkit/production/tmp/production/96185/s_NP_057092.hhr -p 20 -P 20 -Z 100 -B 100 -seq 1 -aliw 80 -local -ssm 2 -norealign -sc 1 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1wmsa_ c.37.1.8 (A:) Rab9a {H 99.4 1.1E-12 1E-16 95.3 12.1 157 34-238 9-168 (174) 2 d2ngra_ c.37.1.8 (A:) CDC42 {H 99.4 2.9E-12 2.8E-16 92.7 10.7 168 34-246 6-185 (191) 3 d1g16a_ c.37.1.8 (A:) Rab-rela 99.3 1.4E-11 1.3E-15 88.5 12.1 155 34-238 5-159 (166) 4 d1c1ya_ c.37.1.8 (A:) Rap1A {H 99.3 6E-12 5.7E-16 90.8 10.2 154 34-238 6-162 (167) 5 d1r2qa_ c.37.1.8 (A:) Rab5a {H 99.3 4.8E-12 4.6E-16 91.4 9.2 162 26-238 1-164 (170) 6 d1ukvy_ c.37.1.8 (Y:) GTPase Y 99.3 4.3E-12 4.1E-16 91.7 8.9 154 34-238 9-164 (204) 7 d1m7ba_ c.37.1.8 (A:) RhoE (RN 99.3 5.8E-12 5.5E-16 90.8 9.2 153 34-233 5-168 (179) 8 d1d5ca_ c.37.1.8 (A:) Rab6 {Ma 99.3 9.3E-12 8.8E-16 89.6 10.0 155 34-237 4-162 (162) 9 d1mh1__ c.37.1.8 (-) Rac {Huma 99.2 3.1E-11 2.9E-15 86.4 10.7 157 34-238 8-175 (183) 10 d1u8za_ c.37.1.8 (A:) Ras-rela 99.2 3E-11 2.9E-15 86.4 9.9 154 34-238 7-162 (168) 11 d1oiva_ c.37.1.8 (A:) Rab11a { 99.2 2.6E-11 2.5E-15 86.8 7.8 154 34-238 9-164 (168) 12 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 99.1 5.3E-10 5E-14 78.7 13.2 158 34-238 5-172 (177) 13 d1i2ma_ c.37.1.8 (A:) Ran {Hum 99.1 8.6E-11 8.2E-15 83.6 8.5 153 34-238 6-162 (170) 14 d1kao__ c.37.1.8 (-) Rap2a {Hu 99.1 3.7E-10 3.5E-14 79.7 10.6 157 34-239 6-166 (167) 15 d1ky3a_ c.37.1.8 (A:) Rab-rela 99.1 4E-10 3.9E-14 79.4 10.5 160 34-238 5-167 (175) 16 d1e0sa_ c.37.1.8 (A:) ADP-ribo 99.0 4.9E-10 4.6E-14 78.9 9.0 153 34-238 15-169 (173) 17 d1ksha_ c.37.1.8 (A:) ADP-ribo 99.0 1.3E-09 1.2E-13 76.3 10.9 123 31-200 2-125 (165) 18 d3raba_ c.37.1.8 (A:) Rab3a {R 99.0 3.1E-09 3E-13 73.9 11.8 156 34-238 8-163 (169) 19 d1fzqa_ c.37.1.8 (A:) ADP-ribo 99.0 8E-10 7.7E-14 77.6 8.0 165 15-238 8-173 (176) 20 d1r8sa_ c.37.1.8 (A:) ADP-ribo 99.0 2.2E-09 2.1E-13 74.9 10.1 155 34-237 3-160 (160) 21 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 98.9 2.1E-09 2.1E-13 74.9 8.6 177 34-255 5-184 (184) 22 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 98.8 1.2E-08 1.2E-12 70.2 10.2 120 34-200 16-136 (186) 23 d1nrjb_ c.37.1.8 (B:) Signal r 98.8 1.5E-08 1.4E-12 69.7 10.6 137 33-209 5-143 (209) 24 d1ctqa_ c.37.1.8 (A:) cH-p21 R 98.8 3.2E-08 3E-12 67.7 11.7 153 34-238 6-160 (166) 25 d1wf3a1 c.37.1.8 (A:3-180) GTP 98.7 3.1E-08 3E-12 67.7 9.3 152 33-238 7-166 (178) 26 d1m2ob_ c.37.1.8 (B:) SAR1 {Ba 98.7 1.3E-07 1.2E-11 64.0 11.3 120 34-200 3-123 (167) 27 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 98.6 3.3E-07 3.2E-11 61.4 11.7 159 34-238 6-164 (170) 28 d1svsa1 c.37.1.8 (A:32-60,A:18 98.6 3.6E-08 3.4E-12 67.4 6.5 114 31-192 2-123 (195) 29 d1moza_ c.37.1.8 (A:) ADP-ribo 98.6 8.8E-08 8.4E-12 64.9 8.4 118 34-198 20-138 (182) 30 d1upta_ c.37.1.8 (A:) ADP-ribo 98.6 4.1E-07 3.9E-11 60.8 11.3 157 31-238 5-162 (169) 31 d1udxa2 c.37.1.8 (A:157-336) O 98.4 3.4E-06 3.2E-10 55.1 13.4 164 34-245 4-174 (180) 32 d1mkya2 c.37.1.8 (A:173-358) P 98.4 1.1E-06 1.1E-10 58.1 10.7 160 33-238 10-181 (186) 33 d1azsc2 c.37.1.8 (C:36-66,C:20 98.4 3.9E-07 3.7E-11 60.9 7.2 112 34-193 8-129 (223) 34 d1egaa1 c.37.1.8 (A:4-182) GTP 98.3 4E-06 3.9E-10 54.6 11.0 148 33-238 7-167 (179) 35 d1mkya1 c.37.1.8 (A:2-172) Pro 98.1 4.7E-06 4.5E-10 54.2 7.9 152 32-238 1-160 (171) 36 d1rfla_ c.37.1.8 (A:) Probable 98.0 2.5E-07 2.4E-11 62.1 0.0 114 34-190 10-130 (172) 37 d1svia_ c.37.1.8 (A:) Probable 97.9 3.9E-05 3.7E-09 48.5 9.6 156 33-236 25-195 (195) 38 d1wb1a4 c.37.1.8 (A:1-179) Elo 97.9 7.9E-05 7.5E-09 46.6 11.1 152 33-238 7-173 (179) 39 d1xzpa2 c.37.1.8 (A:212-371) T 97.8 3.1E-05 3E-09 49.1 8.1 147 34-238 3-157 (160) 40 d1lnza2 c.37.1.8 (A:158-342) O 97.7 2.1E-06 2E-10 56.4 0.2 126 32-190 2-129 (185) 41 d1puia_ c.37.1.8 (A:) Probable 97.2 0.00055 5.3E-08 41.4 7.7 161 33-237 18-186 (188) 42 d1exma3 c.37.1.8 (A:3-212) Elo 97.1 0.0029 2.8E-07 36.9 10.7 142 33-221 11-172 (210) 43 d1kk1a3 c.37.1.8 (A:6-200) Ini 96.9 0.0096 9.2E-07 33.7 11.7 159 33-238 7-193 (195) 44 d1jnya3 c.37.1.8 (A:4-227) Elo 96.9 0.0018 1.7E-07 38.2 7.8 146 33-214 5-178 (224) 45 d1etu_1 c.37.1.8 (5-200) Elong 96.5 0.018 1.7E-06 32.1 10.6 142 33-221 9-169 (196) 46 d1g7sa4 c.37.1.8 (A:1-227) Ini 96.3 0.0011 1.1E-07 39.5 3.6 133 32-206 4-150 (227) 47 d1d2ea3 c.37.1.8 (A:55-250) El 96.3 0.0044 4.2E-07 35.8 6.5 141 33-221 5-165 (196) 48 d1tq4a_ c.37.1.8 (A:) Interfer 95.9 0.023 2.2E-06 31.3 8.5 131 33-207 58-205 (400) 49 d1f60a3 c.37.1.8 (A:2-240) Elo 95.8 0.013 1.3E-06 32.8 7.0 143 33-214 8-179 (239) 50 d1h65a_ c.37.1.8 (A:) Chloropl 95.3 0.037 3.5E-06 30.1 7.9 122 1-134 10-141 (257) 51 d1g2912 c.37.1.12 (1:1-240) Ma 95.0 0.16 1.5E-05 26.1 10.3 162 31-230 29-206 (240) 52 d1r5ba3 c.37.1.8 (A:215-459) E 94.5 0.049 4.6E-06 29.3 6.8 145 33-215 26-200 (245) 53 d1dar_2 c.37.1.8 (1-282) Elong 94.5 0.11 1E-05 27.2 8.5 108 32-189 13-140 (282) 54 d1t9ha2 c.37.1.8 (A:68-298) Pr 94.4 0.0073 7E-07 34.4 2.3 60 31-100 97-156 (231) 55 d1u0la2 c.37.1.8 (A:69-293) Pr 93.5 0.021 2E-06 31.7 3.3 26 31-56 95-120 (225) 56 d1n0wa_ c.37.1.11 (A:) DNA rep 93.3 0.15 1.5E-05 26.2 7.5 151 26-222 18-171 (242) 57 d1lw7a2 c.37.1.1 (A:220-411) T 92.4 0.019 1.8E-06 31.9 1.8 45 32-76 8-53 (192) 58 d1gky__ c.37.1.1 (-) Guanylate 92.3 0.04 3.8E-06 29.9 3.4 58 32-89 2-75 (186) 59 d1szpa2 c.37.1.11 (A:145-395) 92.0 0.093 8.9E-06 27.6 4.9 152 26-222 29-182 (251) 60 d1kgda_ c.37.1.1 (A:) Guanylat 91.9 0.049 4.7E-06 29.3 3.4 58 32-89 4-77 (178) 61 d1v43a3 c.37.1.12 (A:7-245) Hy 91.3 0.39 3.7E-05 23.8 7.4 170 31-230 32-203 (239) 62 d1puja_ c.37.1.8 (A:) Probable 91.1 0.057 5.5E-06 28.9 3.1 23 33-55 114-136 (273) 63 d1t4ga2 c.37.1.11 (A:65-322) D 91.1 0.37 3.6E-05 23.9 7.3 154 25-222 28-193 (258) 64 d1lvga_ c.37.1.1 (A:) Guanylat 90.2 0.054 5.1E-06 29.1 2.3 58 32-89 1-74 (190) 65 d1xjca_ c.37.1.10 (A:) Molybdo 90.1 0.063 6E-06 28.7 2.6 21 32-52 2-22 (165) 66 d1q12a2 c.37.1.12 (A:4-235) Ma 90.0 1.7 0.00016 19.9 9.8 170 31-230 26-197 (232) 67 d1oxxk2 c.37.1.12 (K:1-242) Gl 88.5 0.7 6.7E-05 22.2 6.9 167 31-230 31-207 (242) 68 d1s4qa_ c.37.1.1 (A:) Guanylat 88.3 0.1 9.8E-06 27.3 2.6 29 30-58 1-29 (183) 69 d1s96a_ c.37.1.1 (A:) Guanylat 88.2 0.088 8.4E-06 27.8 2.2 37 31-67 2-38 (205) 70 d1v5wa_ c.37.1.11 (A:) Meiotic 87.9 0.63 6E-05 22.5 6.4 154 26-222 32-187 (258) 71 d1htwa_ c.37.1.18 (A:) Hypothe 87.3 0.25 2.4E-05 25.0 4.0 45 34-84 36-84 (158) 72 d1kkma_ c.91.1.2 (A:) HPr kina 87.0 0.063 6E-06 28.7 0.8 69 18-89 1-73 (176) 73 d1ko7a2 c.91.1.2 (A:130-298) H 86.8 0.09 8.6E-06 27.7 1.6 59 28-89 12-74 (169) 74 d1np6a_ c.37.1.10 (A:) Molybdo 86.3 0.14 1.3E-05 26.6 2.3 19 34-52 5-23 (170) 75 d1fts_2 c.37.1.10 (285-495) GT 85.9 0.16 1.5E-05 26.1 2.5 19 31-49 9-27 (211) 76 d1okkd2 c.37.1.10 (D:97-303) G 85.5 0.15 1.4E-05 26.4 2.1 38 28-65 3-40 (207) 77 d1ly1a_ c.37.1.1 (A:) Polynucl 84.8 0.15 1.4E-05 26.4 1.8 23 32-54 3-25 (152) 78 d1l2ta_ c.37.1.12 (A:) MJ0796 84.6 0.28 2.7E-05 24.6 3.2 27 31-58 31-57 (230) 79 d1g6oa_ c.37.1.11 (A:) Hexamer 84.5 0.23 2.2E-05 25.2 2.7 24 30-53 165-188 (323) 80 d1jj7a_ c.37.1.12 (A:) Peptide 84.4 0.29 2.7E-05 24.6 3.2 27 31-58 40-66 (251) 81 d4tmka_ c.37.1.1 (A:) Thymidyl 83.9 0.3 2.9E-05 24.5 3.1 21 31-51 2-22 (210) 82 d1mt0a_ c.37.1.12 (A:) Haemoly 83.0 0.35 3.4E-05 24.0 3.1 27 31-58 29-55 (241) 83 d1knxa2 c.91.1.2 (A:133-309) H 82.7 0.34 3.2E-05 24.1 3.0 27 28-54 12-38 (177) 84 d1xp8a1 c.37.1.11 (A:15-282) R 82.3 0.75 7.2E-05 22.0 4.6 140 24-222 50-192 (268) 85 d1n0ua2 c.37.1.8 (A:3-343) Elo 82.0 2 0.00019 19.3 6.7 155 32-188 18-214 (341) 86 d1nn5a_ c.37.1.1 (A:) Thymidyl 80.9 0.32 3.1E-05 24.2 2.3 24 31-54 3-26 (209) 87 d1r0wa_ c.37.1.12 (A:) Cystic 80.5 0.47 4.5E-05 23.3 3.0 27 31-58 62-88 (281) 88 d1ak2_1 c.37.1.1 (14-146,177-2 80.4 0.3 2.9E-05 24.4 2.0 24 31-54 3-26 (190) 89 d1viaa_ c.37.1.2 (A:) Shikimat 80.4 0.29 2.8E-05 24.5 2.0 16 32-47 1-16 (161) 90 d1kaga_ c.37.1.2 (A:) Shikimat 80.3 0.29 2.8E-05 24.5 2.0 16 32-47 3-18 (169) 91 d1sgwa_ c.37.1.12 (A:) Putativ 80.0 0.49 4.7E-05 23.1 3.0 28 30-58 26-53 (200) 92 d1nksa_ c.37.1.1 (A:) Adenylat 79.8 0.47 4.5E-05 23.3 2.8 20 32-51 2-21 (194) 93 d1p4sa_ c.37.1.1 (A:) Adenylat 79.7 0.25 2.4E-05 24.9 1.5 22 33-54 2-23 (181) 94 d1p9ra_ c.37.1.11 (A:) Extrace 78.7 0.33 3.2E-05 24.2 1.8 95 1-110 142-259 (401) 95 d1nija1 c.37.1.10 (A:2-223) Hy 78.6 0.44 4.2E-05 23.4 2.4 29 34-62 6-34 (222) 96 d1mv5a_ c.37.1.12 (A:) Multidr 78.5 0.59 5.6E-05 22.6 3.1 27 31-58 28-54 (242) 97 d1tmka_ c.37.1.1 (A:) Thymidyl 77.7 0.66 6.3E-05 22.3 3.1 21 31-51 3-23 (214) 98 d1ji0a_ c.37.1.12 (A:) Branche 77.4 0.71 6.8E-05 22.1 3.2 27 31-58 32-58 (240) 99 d1f5na2 c.37.1.8 (A:7-283) Int 77.4 0.64 6.2E-05 22.4 3.0 21 34-54 35-55 (277) 100 d1pf4a1 c.37.1.12 (A:321-564) 77.3 0.25 2.4E-05 25.0 0.8 27 31-58 49-75 (244) No 1 >d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens)} Probab=99.42 E-value=1.1e-12 Score=95.34 Aligned_columns=157 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 899865988637777755276--678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDR--DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r--~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|..|+||||||+||... .+.+.||++.+|..-.-...+... ..++|+.+|......+....+..-. .+ T Consensus 9 ivivG~~~vGKTsLi~~~~~~~~~~~~~~t~~~~~~~~~i~~~~~~i--~l~~~d~~~~~~~~~~~~~~~~~~d----~~ 82 (174) T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFV--TMQIWDTAGQERFRSLRTPFYRGSD----CC 82 (174) T ss_dssp EEEECCTTSSHHHHHHHHHHSCCCC----CCSEEEEEEEEEETTEEE--EEEEEECCCCGGGHHHHGGGGTTCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECEEEEEEEECCEEE--EEEEEECCCCCHHHHHHHEECCCCE----EE T ss_conf 99981799878999999863813565333155110567999989799--9998312473001021100126865----89 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|++.|.++ +.++.|++.++...+ ...+..+|++|||+|.|+- T Consensus 83 i~v~d~~~~~s~-~~i~~~~~~i~~~~~---------------------------------~~~~~~~piiivgnK~Dl~ 128 (174) T d1wmsa_ 83 LLTFSVDDSQSF-QNLSNWKKEFIYYAD---------------------------------VKEPESFPFVILGNKIDIS 128 (174) T ss_dssp EEEEETTCHHHH-HTHHHHHHHHHHHHT---------------------------------CSCTTTSCEEEEEECTTCS T ss_pred EEEEECCCHHHH-HHHHHHHHHHHHHHC---------------------------------CCCCCCCCEEEEECCCCCC T ss_conf 998635886789-999899999998710---------------------------------0367885289995145754 Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEE-EECHHHHHHHHHHHHHHHH Q ss_conf 5887667899999999999860946888-5120345678999888750 Q Ver_Hs_NP_0570 192 QDFESEKRKVICKTLRFVAHYYGASLMF-TSKSEALLLKIRGVINQLA 238 (351) Q Consensus 192 ~~~D~e~rK~i~r~LR~iAH~yGA~L~F-tSk~e~l~~r~r~~inhl~ 238 (351) ++.-++.. ++.++..+|...+| +|-+.. ..+..+.+.++ T Consensus 129 ~~~v~~ee------~~~~~~~~~~~~~~e~Sak~~--~~I~e~f~~li 168 (174) T d1wmsa_ 129 ERQVSTEE------AQAWCRDNGDYPYFETSAKDA--TNVAAAFEEAV 168 (174) T ss_dssp SCSSCHHH------HHHHHHHTTCCCEEECCTTTC--TTHHHHHHHHH T ss_pred CCCCCHHH------HHHHHHHCCCCCEEEEECCCC--CCHHHHHHHHH T ss_conf 35569899------999999707982799860589--88889999999 No 2 >d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens)} Probab=99.35 E-value=2.9e-12 Score=92.69 Aligned_columns=168 Identities=17% Q ss_pred EEEEECCCCCHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 899865988637777755276--678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDR--DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r--~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|+.++|||||++||+.+ .+.+.||++..|+.--..++..- ..++|+.+|-.....+....++..++ + T Consensus 6 i~iiG~~~vGKSsli~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~i---~~~i~D~~g~~~~~~~~~~~~~~~~~----~ 78 (191) T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPY---TLGLFDTAGQEDYDRLRPLSYPQTDV----F 78 (191) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEEEEEEETTEEE---EEEEEEECCSGGGTTTGGGGCTTCSE----E T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCEEE---EEEEECCCCCCHHHHHHHHHCCCCEE----E T ss_conf 9998079977899999987185466535520233577876266479---99973146762144664542055278----9 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|.|++.+.++=.-.++|+..++.... .+|+++||+|+|.. T Consensus 79 ilv~d~~~~~Sf~~~~~~~~~~~~~~~~--------------------------------------~ipiilvgnK~Dl~ 120 (191) T d2ngra_ 79 LVCFSVVSPSSFENVKEKWVPEITHHCP--------------------------------------KTPFLLVGTQIDLR 120 (191) T ss_dssp EEEEETTCHHHHHHHHHTHHHHHHHHCT--------------------------------------TCCEEEEEECGGGG T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHCCC--------------------------------------CCEEEEEECCCCCC T ss_conf 9987146855899988877888752378--------------------------------------74389974052433 Q ss_pred CC-------CCHHHHHHHHHHHHHHHHHCCCEEEE-EECHHHHHHH--HHHHHHHHHCCCCCCCE Q ss_conf 58-------87667899999999999860946888-5120345678--99988875057777730 Q Ver_Hs_NP_0570 192 QD-------FESEKRKVICKTLRFVAHYYGASLMF-TSKSEALLLK--IRGVINQLAFGIDKSKS 246 (351) Q Consensus 192 ~~-------~D~e~rK~i~r~LR~iAH~yGA~L~F-tSk~e~l~~r--~r~~inhl~FG~~~~k~ 246 (351) .+ .....|.+--.-..-+|..+++.-+| +|-...-... +..+|...+-...+.++ T Consensus 121 ~~~~~~~~~~~~~~r~v~~~~~~~~a~~~~~~~~~E~SA~tg~gI~e~f~~~i~~~l~~~~~~~~ 185 (191) T d2ngra_ 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKS 185 (191) T ss_dssp GCHHHHHHHHTTTCCCCCHHHHHHHHHHTTCSCEEECCTTTCTTHHHHHHHHHHHHTSCCSTTCC T ss_pred CCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC T ss_conf 22026788874046776778999999980897089986047877789999999998547788877 No 3 >d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae)} Probab=99.31 E-value=1.4e-11 Score=88.53 Aligned_columns=155 Identities=16% Q ss_pred EEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEEEE Q ss_conf 89986598863777775527667888753100022111015787111788897157854202110000423512067788 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVL 113 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~vii 113 (351) |+++|..|+||||||+|++...-.+..+..+...|......-....--.++|+.+|......+..--++ ..-.+++ T Consensus 5 i~ivG~~~vGKTsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~----~~d~~i~ 80 (166) T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYR----GAMGIIL 80 (166) T ss_dssp EEEEESTTSSHHHHHHHHHHCCCCC-------CCEEEEEEESSSCEEEEEEECCTTGGGTSCCCHHHHT----TEEEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHCC----CCCEEEE T ss_conf 999807998799999998648007762445411468889987584136887205783200001243326----9968999 Q ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCCC Q ss_conf 87369846899999999999999999999998526953789999999984146677600111068877997121000158 Q Ver_Hs_NP_0570 114 VLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQD 193 (351) Q Consensus 114 vlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F~~ 193 (351) |+|++.|.++ ..++.|++.++.. ..-.+|+++||+|.|..+. T Consensus 81 v~d~~~~~s~-~~~~~~~~~i~~~-------------------------------------~~~~~piivv~nK~Dl~~~ 122 (166) T d1g16a_ 81 VYDITDERTF-TNIKQWFKTVNEH-------------------------------------ANDEAQLLLVGNKSDMETR 122 (166) T ss_dssp EEETTCHHHH-HTHHHHHHHHHHH-------------------------------------SCTTCEEEEEEECTTCTTC T ss_pred EEECCCCCHH-HHHHHHHHHHHHC-------------------------------------CCCCCCEEEEEECHHHHHC T ss_conf 9851565338-8999999998612-------------------------------------6898516667631022200 Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 194 FESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 194 ~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) ..+... .+.+|..+|...+.+|-... ..+..+.++++ T Consensus 123 ~v~~~e------~~~~~~~~~~~~~e~Sa~~g--~gv~~lf~~l~ 159 (166) T d1g16a_ 123 VVTADQ------GEALAKELGIPFIESSAKND--DNVNEIFFTLA 159 (166) T ss_dssp CSCHHH------HHHHHHHHTCCEEECBTTTT--BSHHHHHHHHH T ss_pred CCCHHH------HHHHHHHCCCCEEEEECCCC--CCHHHHHHHHH T ss_conf 675889------99999965993999961589--88889999999 No 4 >d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens)} Probab=99.31 E-value=6e-12 Score=90.76 Aligned_columns=154 Identities=17% Q ss_pred EEEEECCCCCHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 8998659886377777552--76678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCL--DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl--~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|+.++||||||+|++ .-.+...||.+-.| ++.-..+...-..++|+.+|-.....+-...++.-. .+ T Consensus 6 i~iiG~~~vGKTsLi~~~~~~~~~~~~~~t~~~~~---~~~~~~~~~~~~~~~~D~~g~~~~~~~~~~~~~~~~----~~ 78 (167) T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSY---RKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQ----GF 78 (167) T ss_dssp EEEECSTTSSHHHHHHHHHHCCCCCSCCCCSEEEE---EEEEESSSCEEEEEEEEECSSCSSTTHHHHHHHHCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEE---EEEEEECCEEEEEEEEECCCCCHHHHHHHHHHCCCC----EE T ss_conf 99981799878999999862733554564002026---889987141456777622566302355576506886----89 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|++.+.. |++++.|+.....+... ..+|+++||+|+|. T Consensus 79 i~v~d~~~~~s-~~~~~~~~~~~~~~~~~------------------------------------~~~piilvgnK~Dl- 120 (167) T d1c1ya_ 79 ALVYSITAQST-FNDLQDLREQILRVKDT------------------------------------EDVPMILVGNKCDL- 120 (167) T ss_dssp EEEEETTCHHH-HHTHHHHHHHHHHHHCC------------------------------------SCCCEEEEEECTTC- T ss_pred EEEECCCCCCC-HHHHHHHHHHHHHHCCC------------------------------------CCEEEEEEEECCCC- T ss_conf 99830676642-68899999999975068------------------------------------97089998504780- Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEE-EECHHHHHHHHHHHHHHHH Q ss_conf 5887667899999999999860946888-5120345678999888750 Q Ver_Hs_NP_0570 192 QDFESEKRKVICKTLRFVAHYYGASLMF-TSKSEALLLKIRGVINQLA 238 (351) Q Consensus 192 ~~~D~e~rK~i~r~LR~iAH~yGA~L~F-tSk~e~l~~r~r~~inhl~ 238 (351) .+.|.+...-.+.+|-.++...+| +|-... ..+..+...++ T Consensus 121 ----~~~~~v~~~e~~~~~~~~~~~~~~e~Sak~~--~~v~elf~~l~ 162 (167) T d1c1ya_ 121 ----EDERVVGKEQGQNLARQWCNCAFLESSAKSK--INVNEIFYDLV 162 (167) T ss_dssp ----GGGCCSCHHHHHHHHHHTTSCEEEECBTTTT--BSHHHHHHHHH T ss_pred ----CCCCCCCHHHHHHHHHHHCCCEEEEEECCCC--CCHHHHHHHHH T ss_conf ----0014789899999999844970788850589--88889999999 No 5 >d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens)} Probab=99.30 E-value=4.8e-12 Score=91.35 Aligned_columns=162 Identities=19% Q ss_pred HHHCCCCEEEEEECCCCCHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECC Q ss_conf 11125745899865988637777755276--6788875310002211101578711178889715785420211000042 Q Ver_Hs_NP_0570 26 GAEIAEKFVFFIGSKNGGKTTIILRCLDR--DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITG 103 (351) Q Consensus 26 ~~~~~ek~v~~vGsk~~GKTTli~Rfl~r--~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~ 103 (351) |+-.+.--++++|..|+||||||+||... .+.+.||+..+|........+... ..++|+.+|...+..+....+.. T Consensus 1 ~~~~~~~ki~liG~~~vGKSsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~--~~~i~d~~g~~~~~~~~~~~~~~ 78 (170) T d1r2qa_ 1 GNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTV--KFEIWDTAGQERYHSLAPMYYRG 78 (170) T ss_dssp CCEEEEEEEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEETTEEE--EEEEEEECCSGGGGGGHHHHHTT T ss_pred CCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCEEE--EEEEECCCCCCHHHHHHHHHHCC T ss_conf 9861147899981799879999999864801566244202454345455579179--99873067730112321554046 Q ss_pred CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE Q ss_conf 35120677888736984689999999999999999999999852695378999999998414667760011106887799 Q Ver_Hs_NP_0570 104 DTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVI 183 (351) Q Consensus 104 ~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvI 183 (351) . ..+++|+|++++.++ ..++.|+..++..... .+|+++ T Consensus 79 ~----~~~i~v~d~~~~~s~-~~~~~~~~~~~~~~~~-------------------------------------~~piil 116 (170) T d1r2qa_ 79 A----QAAIVVYDITNEESF-ARAKNWVKELQRQASP-------------------------------------NIVIAL 116 (170) T ss_dssp C----SEEEEEEETTCHHHH-HHHHHHHHHHHHHSCT-------------------------------------TCEEEE T ss_pred C----CEEEEEEECCCHHHH-HHHHHHHHHHHHHCCC-------------------------------------CEEEEE T ss_conf 5----289999625301468-9999999998750378-------------------------------------557775 Q ss_pred ECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 7121000158876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 184 IGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 184 Vg~KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) ||+|.|.- +.+.+.-.-++.+|..+++.++.+|-... ..+..+.+.++ T Consensus 117 VgnK~Dl~-----~~~~v~~~~~~~~~~~~~~~~~e~Sa~~~--~gi~elf~~l~ 164 (170) T d1r2qa_ 117 SGNKADLA-----NKRAVDFQEAQSYADDNSLLFMETSAKTS--MNVNEIFMAIA 164 (170) T ss_dssp EEECGGGG-----GGCCSCHHHHHHHHHHTTCEEEECCTTTC--TTHHHHHHHHH T ss_pred EEEHHHHH-----HHCCCCHHHHHHHHHHCCCEEEEEECCCC--CCHHHHHHHHH T ss_conf 32001022-----10477989999999955981899862689--78889999999 No 6 >d1ukvy_ c.37.1.8 (Y:) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae)} Probab=99.30 E-value=4.3e-12 Score=91.66 Aligned_columns=154 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 899865988637777755276--678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDR--DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r--~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |++||..|+||||||+|++.. .+.+.||++.+|..-.-...+... ..++|+.+|......+...-++.-. .+ T Consensus 9 I~iiG~~~vGKTSLi~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~--~i~i~D~~g~e~~~~~~~~~~~~ad----~i 82 (204) T d1ukvy_ 9 LLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTV--KLQIWDTAGQERFRTITSSYYRGSH----GI 82 (204) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCTTCCCSSCCCEEEEEEEETTEEE--EEEEECCTTTTTTTCCCHHHHTTCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCEEE--EEEEECCCCCCHHHHHHHHHHCCCC----EE T ss_conf 88981699779999999864810576245211246688998888688--7443026773012345677614797----47 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|++.+.+ +..++.|+..+...... .+|+++||+|.|.- T Consensus 83 ilvfd~~d~~S-~~~~~~~~~~i~~~~~~-------------------------------------~~~iiivgnK~D~~ 124 (204) T d1ukvy_ 83 IIVYDVTDQES-FNGVKMWLQEIDRYATS-------------------------------------TVLKLLVGNKCDLK 124 (204) T ss_dssp EEEEETTCHHH-HHHHHHHHHHHHHHSCT-------------------------------------TCEEEEEEECTTCT T ss_pred EEEEECCCHHH-HHHHHHHHHHHHHHHCC-------------------------------------CCEEEEEEECCCCH T ss_conf 99985166012-33568999998653102-------------------------------------41024554113400 Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 58876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 192 ~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) +. +.+.-.-.+.+|-.+|+..+.+|-... ..+..+...++ T Consensus 125 ~~-----~~v~~~e~~~~~~~~~~~~~e~SAk~~--~gi~e~f~~i~ 164 (204) T d1ukvy_ 125 DK-----RVVEYDVAKEFADANKMPFLETSALDS--TNVEDAFLTMA 164 (204) T ss_dssp TT-----CCSCHHHHHHHHHHTTCCEEECCTTTC--TTHHHHHHHHH T ss_pred HC-----CCCCHHHHHHHHHHCCCEEEEEECCCC--CCHHHHHHHHH T ss_conf 10-----254189999999961981899951689--88899999999 No 7 >d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus)} Probab=99.29 E-value=5.8e-12 Score=90.85 Aligned_columns=153 Identities=20% Q ss_pred EEEEECCCCCHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 899865988637777755276--678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDR--DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r--~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|+.|+||||||+||+.. .+.+.||+.-.|+--...++..- -.++|..+|...+..+....++. .-.+ T Consensus 5 I~iiG~~~vGKTsli~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~~---~~~i~D~~g~~~~~~~~~~~~~~----~d~~ 77 (179) T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRI---ELSLWDTSGSPYYDNVRPLSYPD----SDAV 77 (179) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEEEEEECSSCEE---EEEEEEECCSGGGTTTGGGGCTT----CSEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCC---EEEEECCCCCCCCCHHHHHHHCC----CCEE T ss_conf 9997069987899999986282366634336762134320133110---26861144321000000566327----8657 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|.|++.+.++=....+|+..++..... +|+++||+|.|+- T Consensus 78 iivydv~~~~Sf~~i~~~~~~~~~~~~~~--------------------------------------~piilvgnK~DL~ 119 (179) T d1m7ba_ 78 LICFDISRPETLDSVLKKWKGEIQEFCPN--------------------------------------TKMLLVGCKSDLR 119 (179) T ss_dssp EEEEETTCHHHHHHHHHTHHHHHHHHCTT--------------------------------------CEEEEEEECGGGG T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHCCC--------------------------------------CEEEEEECCCCCC T ss_conf 99980686035788988777777640267--------------------------------------4157875266632 Q ss_pred CCCCHH-------HHHHHHHHHHHHHHHCCCEEEE-EECHHHHHHH-HHHH Q ss_conf 588766-------7899999999999860946888-5120345678-9998 Q Ver_Hs_NP_0570 192 QDFESE-------KRKVICKTLRFVAHYYGASLMF-TSKSEALLLK-IRGV 233 (351) Q Consensus 192 ~~~D~e-------~rK~i~r~LR~iAH~yGA~L~F-tSk~e~l~~r-~r~~ 233 (351) .+.... .|.+...-.+-+|-.+|+..+| +|-... .+ ++++ T Consensus 120 ~~~~~~~~~~~~~~~~Vs~~e~~~la~~~~~~~y~E~SA~t~--~n~v~~~ 168 (179) T d1m7ba_ 120 TDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQS--ENSVRDI 168 (179) T ss_dssp GCHHHHHHHHTTTCCCCCHHHHHHHHHHHTCSEEEECBTTTB--HHHHHHH T ss_pred CHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCC--CCHHHHH T ss_conf 103456654430376589899999999708952898750368--8408999 No 8 >d1d5ca_ c.37.1.8 (A:) Rab6 {Malaria parasite (Plasmodium falciparum)} Probab=99.29 E-value=9.3e-12 Score=89.58 Aligned_columns=155 Identities=24% Q ss_pred EEEEECCCCCHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 8998659886377777552--76678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCL--DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl--~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|..|+|||||+++|. .-.+...||++.+|........+... ..++|+.+|...........+.... ++ T Consensus 4 i~i~G~~~vGKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~--~~~~~d~~g~~~~~~~~~~~~~~~d----~~ 77 (162) T d1d5ca_ 4 LVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPV--RLQLWDTAGQERFRSLIPSYIRDSA----AA 77 (162) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCTTCCCCCCCEEEEEEEEETTEEE--EEEEEECCCSGGGGGGHHHHHTTCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCEEE--EEEEECCCCCCHHHHHHHHHHCCCC----EE T ss_conf 89981799879999999864801566133155467778973088169--9986237652033456677632683----89 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|++.+.++ +.+..|+..+++.... ..|+++||+|.|. T Consensus 78 i~v~d~~~~~s~-~~~~~~l~~i~~~~~~-------------------------------------~~piilvgnK~Dl- 118 (162) T d1d5ca_ 78 IVVYDITNRQSF-ENTTKWIQDILNERGK-------------------------------------DVIIALVGNKTDL- 118 (162) T ss_dssp EEEEETTCHHHH-HTHHHHHHHHHHHHTT-------------------------------------SSEEEEEEECGGG- T ss_pred EEEEECCCCCCH-HHHHHHHHHHHHHCCC-------------------------------------CEEEEEEEECCCC- T ss_conf 999744666777-8999999999751248-------------------------------------6578997521465- Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH--HHHHHHHH Q ss_conf 58876678999999999998609468885120345678--99988875 Q Ver_Hs_NP_0570 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK--IRGVINQL 237 (351) Q Consensus 192 ~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r--~r~~inhl 237 (351) .+.+++.-.-+.-+|-.+|+..+++|-......+ ++.+.+.+ T Consensus 119 ----~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~g~gv~~lf~~i~~~l 162 (162) T d1d5ca_ 119 ----GDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTASKL 162 (162) T ss_dssp ----GGGCCSCHHHHHHHHHHTTCEEEECBTTTTBSCHHHHHHHHHCC T ss_pred ----CCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHC T ss_conf ----32245488999999996499299997268968789999999839 No 9 >d1mh1__ c.37.1.8 (-) Rac {Human (Homo sapiens)} Probab=99.24 E-value=3.1e-11 Score=86.37 Aligned_columns=157 Identities=20% Q ss_pred EEEEECCCCCHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 8998659886377777552--76678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCL--DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl--~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|..|+|||||++||. ...+.+.||+.-.|+.-...++..- ..++|..+|-..+..+....++..+ .+ T Consensus 8 i~iiG~~~vGKTsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~---~l~i~d~~g~~~~~~~~~~~~~~~~----~~ 80 (183) T d1mh1__ 8 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPV---NLGLWDTAGQEDYDRLRPLSYPQTD----VS 80 (183) T ss_dssp EEEECSTTSSHHHHHHHHHHSSCCSSCCCCSCCEEEEEEEETTEEE---EEEEECCCCSGGGTTTGGGGCTTCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEEE---EEEEECCCCCHHHHHHCCCCCCCCC----EE T ss_conf 9998079987999999986173366534405667888999800687---7665115431011000102123321----78 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|++++.++=....+|+..++....+ +|++|||+|+|.- T Consensus 81 ilv~di~~~~s~~~~~~~~~~~~~~~~~~--------------------------------------~piiivgnK~D~~ 122 (183) T d1mh1__ 81 LICFSLVSPASFENVRAKWYPEVRHHCPN--------------------------------------TPIILVGTKLDLR 122 (183) T ss_dssp EEEEETTCHHHHHHHHHTHHHHHHHHSTT--------------------------------------SCEEEEEECHHHH T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCC--------------------------------------CEEEEEEECCCCC T ss_conf 99974356025888878878887523788--------------------------------------1799986066751 Q ss_pred CCCCHHHHH--------HHHHHHHHHHHHCCCEEEE-EECHHHHHHHHHHHHHHHH Q ss_conf 588766789--------9999999999860946888-5120345678999888750 Q Ver_Hs_NP_0570 192 QDFESEKRK--------VICKTLRFVAHYYGASLMF-TSKSEALLLKIRGVINQLA 238 (351) Q Consensus 192 ~~~D~e~rK--------~i~r~LR~iAH~yGA~L~F-tSk~e~l~~r~r~~inhl~ 238 (351) .. .....+ +...--+-+|..+|+-.+| +|-... ..+..+...++ T Consensus 123 ~~-~~~~~~~~~~~~~~i~~~e~~~~a~~~~~~~~~e~Sa~~~--~gI~e~f~~~i 175 (183) T d1mh1__ 123 DD-KDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQ--RGLKTVFDEAI 175 (183) T ss_dssp TC-HHHHHHHHHTTCCCCCHHHHHHHHHHTTCSEEEECCTTTC--TTHHHHHHHHH T ss_pred CC-HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCC--CCHHHHHHHHH T ss_conf 10-1355667764137677789999999718950799760478--78789999999 No 10 >d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus)} Probab=99.22 E-value=3e-11 Score=86.39 Aligned_columns=154 Identities=20% Q ss_pred EEEEECCCCCHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 899865988637777755276--678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDR--DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r--~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|+.|+||||||+|++.. .+.+.||.+-.|..-...++++. ...+|+.+|--....+....++.-. .+ T Consensus 7 i~iiG~~~vGKTsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~---~~~i~d~~g~~~~~~~~~~~~~~~d----~~ 79 (168) T d1u8za_ 7 VIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEV---QIDILDTAGQEDYAAIRDNYFRSGE----GF 79 (168) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCSCCCTTCCEEEEEEEEETTEEE---EEEEEECCC---CHHHHHHHHHHCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEEEE---EEEEEECCCCCCCCCCHHHHCCCCC----EE T ss_conf 9998279987899999986483267724532678899999811687---5478742356420100010002442----79 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|++++.++=...++| .++.+.....+ +|++|||+|.|+ T Consensus 80 i~v~d~~~~~s~~~i~~~~--------~~~~~~~~~~~-----------------------------~piiiv~nK~Dl- 121 (168) T d1u8za_ 80 LCVFSITEMESFAATADFR--------EQILRVKEDEN-----------------------------VPFLLVGNKSDL- 121 (168) T ss_dssp EEEEETTCHHHHHHHHHHH--------HHHHHHHCCTT-----------------------------SCEEEEEECGGG- T ss_pred EEEEEECCCCCHHHHHHHH--------HHHHHHCCCCC-----------------------------CEEEEEEECCCC- T ss_conf 9998614732168999888--------99985307999-----------------------------389999505670- Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 58876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 192 ~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) .+++.+...-++.+|..+|...+.+|-+.. ..+..++..++ T Consensus 122 ----~~~~~v~~~~~~~~~~~~~~~~~e~Sak~~--~~i~e~f~~l~ 162 (168) T d1u8za_ 122 ----EDKRQVSVEEAKNRADQWNVNYVETSAKTR--ANVDKVFFDLM 162 (168) T ss_dssp ----GGGCCSCHHHHHHHHHHHTCEEEECCTTTC--TTHHHHHHHHH T ss_pred ----CCCCCCCHHHHHHHHHHCCCCEEEEECCCC--CCHHHHHHHHH T ss_conf ----011577889999999964995899972589--88889999999 No 11 >d1oiva_ c.37.1.8 (A:) Rab11a {Human (Homo sapiens)} Probab=99.18 E-value=2.6e-11 Score=86.77 Aligned_columns=154 Identities=23% Q ss_pred EEEEECCCCCHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 8998659886377777552766--78887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDRD--EPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r~--e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |++||..|+||||||++++... +...||.+.++........+... ...+|..+|......+-.-.++.... + T Consensus 9 i~ivG~~~vGKSSLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~D~~g~~~~~~~~~~~~~~~d~----~ 82 (168) T d1oiva_ 9 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI--KAQIWDTAGQERYRAITSAYYRGAVG----A 82 (168) T ss_dssp EEEESSTTSSHHHHHHHHHHSCCCSSCCCCSSEEEEEEEEEETTEEE--EEEEEEECSCCCCHHHHHHHHTTEEE----E T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCEEE--EEEEECCCCCCHHHHHHHHHHCCCCE----E T ss_conf 99983699879999999865803436553265334227899889489--99985067830123555776227878----9 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|++.+.++=. ++.|+..+++.... .+|++|||+|.|.- T Consensus 83 i~v~d~~~~~s~~~-i~~~~~~i~~~~~~-------------------------------------~~piiivgnK~Dl~ 124 (168) T d1oiva_ 83 LLVYDIAKHLTYEN-VERWLKELRDHADS-------------------------------------NIVIMLVGNKSDLR 124 (168) T ss_dssp EEEEETTCHHHHHT-HHHHHHHHHHHSCT-------------------------------------TCEEEEEEECTTCG T ss_pred EEEEEECCCCHHHH-HHHHHHHHHHHCCC-------------------------------------CEEEEEEEECCCHH T ss_conf 99998426301688-99999999861489-------------------------------------53899611000122 Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 58876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 192 ~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) +.+.+.-.-.+.+|..+|+..+.+|-... ..+..+.+.++ T Consensus 125 -----~~~~v~~~~~~~~~~~~~~~~~e~Sak~g--~~i~e~f~~ii 164 (168) T d1oiva_ 125 -----HLRAVPTDEARAFAEKNGLSFIETSALDS--TNVEAAFQTIL 164 (168) T ss_dssp -----GGCCSCHHHHHHHHHHHTCEEEECCTTTC--TTHHHHHHHHH T ss_pred -----HCCCCCHHHHHHHHHHCCCCEEEEECCCC--CCHHHHHHHHH T ss_conf -----20377989999999963993899971689--78789999999 No 12 >d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens)} Probab=99.14 E-value=5.3e-10 Score=78.70 Aligned_columns=158 Identities=20% Q ss_pred EEEEECCCCCHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 8998659886377777552--76678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCL--DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl--~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|..|+|||||++|++ .-.+...||+.-.++---..+++.. -..+|+.+|-..+..+....++.-. .+ T Consensus 5 I~iiG~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~~~i~~~~~~~---~~~i~D~~g~~~~~~~~~~~~~~~~----~~ 77 (177) T d1kmqa_ 5 LVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQV---ELALWDTAGLEDYDRLRPLSYPDTD----VI 77 (177) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEEEEEEETTEEE---EEEEEEECCSGGGTTTGGGGCTTCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCEE---EEEEEECCCCCCCCCCHHCCCCCCC----EE T ss_conf 9998269987999999986273356535503556789986459367---6678534775322311000110455----48 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|++.+.++=.-.++|+..++.... .+|++|||+|.|+. T Consensus 78 ilv~d~~~~~sf~~~~~~~~~~~~~~~~--------------------------------------~~piiivgnK~Dl~ 119 (177) T d1kmqa_ 78 LMCFSIDSPDSLENIPEKWTPEVKHFCP--------------------------------------NVPIILVGNKKDLR 119 (177) T ss_dssp EEEEETTCHHHHHHHHHTHHHHHHHHST--------------------------------------TSCEEEEEECGGGT T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHCCC--------------------------------------CEEEEEEEECCCCC T ss_conf 9998078545799998766899863279--------------------------------------70899986056755 Q ss_pred CCCCHHHHHHHH-------HHHHHHHHHCCCEEEE-EECHHHHHHHHHHHHHHHH Q ss_conf 588766789999-------9999999860946888-5120345678999888750 Q Ver_Hs_NP_0570 192 QDFESEKRKVIC-------KTLRFVAHYYGASLMF-TSKSEALLLKIRGVINQLA 238 (351) Q Consensus 192 ~~~D~e~rK~i~-------r~LR~iAH~yGA~L~F-tSk~e~l~~r~r~~inhl~ 238 (351) ..-..+.....- .-...+|..+|.--+| +|-... ..+..+...++ T Consensus 120 ~~~~~~~~~~~~~~~~i~~~~~~~~a~~~~~~~~~e~Sak~~--~gv~e~f~~~~ 172 (177) T d1kmqa_ 120 NDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTK--DGVREVFEMAT 172 (177) T ss_dssp TCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSEEEECCTTTC--TTHHHHHHHHH T ss_pred CCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCC--CCHHHHHHHHH T ss_conf 330256888865224689899999999728942798750588--78889999999 No 13 >d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens)} Probab=99.13 E-value=8.6e-11 Score=83.60 Aligned_columns=153 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 899865988637777755276--678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDR--DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r--~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|..|+|||||++|+++. .+.++||++.++....-...+... ..++|+.+|-..+..+.....+... .+ T Consensus 6 I~iiG~~~vGKTsll~~~~~~~~~~~~~~T~~~~~~~~~~~~~~~~~--~~~i~D~~g~~~~~~~~~~~~~~~~----~~ 79 (170) T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPI--KFNVWDTAGQEKFGGLRDGYYIQAQ----CA 79 (170) T ss_dssp EEEEECTTSSHHHHHHTTC-----CCEEEETTEEEEEEEECBTTCCE--EEEEEECTTHHHHSSCGGGGTTTCC----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCEE--EEEECCCCCCHHHHHHHHHHCCCCC----EE T ss_conf 99981799879999999864811666233378745678875389279--9997157641012221123205775----79 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|++.|.++ ..+..|+...+.+-.+ +|+++||+|.|.- T Consensus 80 ilv~d~~~~~s~-~~~~~~~~~~~~~~~~--------------------------------------~piiiVgnK~Dl~ 120 (170) T d1i2ma_ 80 IIMFDVTSRVTY-KNVPNWHRDLVRVCEN--------------------------------------IPIVLCGNKVDIK 120 (170) T ss_dssp EEEEETTSGGGG-TTHHHHHHHHHHHHCS--------------------------------------CCEEEEEECCCCS T ss_pred EEEEECCCCCHH-HHHHHHHHHHHHCCCC--------------------------------------EEEEEEEEECCHH T ss_conf 999705774126-8888876544312575--------------------------------------2789987512202 Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH--HHHHHHHHH Q ss_conf 58876678999999999998609468885120345678--999888750 Q Ver_Hs_NP_0570 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK--IRGVINQLA 238 (351) Q Consensus 192 ~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r--~r~~inhl~ 238 (351) +....+.....++ .++...+.+|-....... +..+..++. T Consensus 121 ~~~~~~e~~~~~~-------~~~~~~~e~Sak~~~~i~e~f~~l~~~l~ 162 (170) T d1i2ma_ 121 DRKVKAKSIVFHR-------KKNLQYYDISAKSNYNFEKPFLWLARKLI 162 (170) T ss_dssp CSCCTTTSHHHHS-------SCSSEEEEEBTTTTBTTTHHHHHHHHHHH T ss_pred HHHHHHHHHHHHH-------HCCCCEEEEECCCCCCHHHHHHHHHHHHH T ss_conf 3223899999998-------56991899972689898899999999984 No 14 >d1kao__ c.37.1.8 (-) Rap2a {Human (Homo sapiens)} Probab=99.10 E-value=3.7e-10 Score=79.67 Aligned_columns=157 Identities=21% Q ss_pred EEEEECCCCCHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 8998659886377777552766--78887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDRD--EPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r~--e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|..|+|||||++|+.+.. +.+.||.+=-|+.....++..- ..++|..+|-.....+.+.-+..-. .+ T Consensus 6 I~iiG~~~vGKTsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~---~~~i~d~~g~~~~~~~~~~~~~~~~----~i 78 (167) T d1kao__ 6 VVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPS---VLEILDTAGTEQFASMRDLYIKNGQ----GF 78 (167) T ss_dssp EEEECCTTSSHHHHHHHHHHSCCCSCCCTTCCEEEEEEEEETTEEE---EEEEEECCCTTCCHHHHHHHHHHCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCEEE---EEEEEECCCCCHHHHHHHHHHCCCC----EE T ss_conf 9998079987899999986481267646520135799999835789---9998514674312344576512663----68 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|++.+.++=...++| .++.......+ +|+++||+|.|. T Consensus 79 i~v~d~~~~~s~~~~~~~~--------~~~~~~~~~~~-----------------------------~p~iiv~nK~Dl- 120 (167) T d1kao__ 79 ILVYSLVNQQSFQDIKPMR--------DQIIRVKRYEK-----------------------------VPVILVGNKVDL- 120 (167) T ss_dssp EEEEETTCHHHHHHHHHHH--------HHHHHHTTTSC-----------------------------CCEEEEEECGGG- T ss_pred EEEEEEEECCCCCCHHHHH--------HHHHHHCCCCC-----------------------------CEEEEEEEECCC- T ss_conf 9998753112321034778--------99997417888-----------------------------638999850354- Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH--HHHHHHHHHC Q ss_conf 58876678999999999998609468885120345678--9998887505 Q Ver_Hs_NP_0570 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK--IRGVINQLAF 239 (351) Q Consensus 192 ~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r--~r~~inhl~F 239 (351) .+.+.+.-.-.+-+|-.+|+..+.+|-......+ +..++.++-| T Consensus 121 ----~~~~~v~~~e~~~~~~~~~~~~~e~Sak~g~~v~~lf~~i~~~~~~ 166 (167) T d1kao__ 121 ----ESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQMNY 166 (167) T ss_dssp ----GGGCCSCHHHHHHHHHHHTSCEEEECTTCHHHHHHHHHHHHHHHHH T ss_pred ----CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCC T ss_conf ----4445579899999999649928999715897888999999997236 No 15 >d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae)} Probab=99.09 E-value=4e-10 Score=79.42 Aligned_columns=160 Identities=23% Q ss_pred EEEEECCCCCHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 899865988637777755276--678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDR--DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r--~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |.+||..|+|||||++||... .+.+.||...++...+......... ..++|..++......+....+. ....+ T Consensus 5 i~ivG~~~vGKStLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 79 (175) T d1ky3a_ 5 VIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVA-TMQVWDTAGQERFQSLGVAFYR----GADCC 79 (175) T ss_dssp EEEECCTTSSHHHHHHHHHHSCCCTTC---CCCSCEEEEECCSSSCCE-EEEEECCC----------CCST----TCCEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCEEE-EEEECCCCHHHHHHCCCHHHHH----HHHHE T ss_conf 999807998899999998658013451340464246889998485479-9974366202343100001333----22300 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|++.+.. ...+..|+.....+.. ...+..+|++|||+|.|+ T Consensus 80 i~~~d~~~~~~-~~~~~~~~~~~~~~~~---------------------------------~~~~~~~piiiv~nK~Dl- 124 (175) T d1ky3a_ 80 VLVYDVTNASS-FENIKSWRDEFLVHAN---------------------------------VNSPETFPFVILGNKIDA- 124 (175) T ss_dssp EEEEETTCHHH-HHTHHHHHHHHHHHHC---------------------------------CSCTTTCCEEEEEECTTS- T ss_pred EEEEEECCCCH-HHHHHHHHHHHHHHHH---------------------------------HCCCCCCEEEEEECCCCC- T ss_conf 21111014310-6788999888998841---------------------------------103589559998403354- Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEE-EECHHHHHHHHHHHHHHHH Q ss_conf 5887667899999999999860946888-5120345678999888750 Q Ver_Hs_NP_0570 192 QDFESEKRKVICKTLRFVAHYYGASLMF-TSKSEALLLKIRGVINQLA 238 (351) Q Consensus 192 ~~~D~e~rK~i~r~LR~iAH~yGA~L~F-tSk~e~l~~r~r~~inhl~ 238 (351) ..+.+...-..++.+|..+|..-+| +|-... ..+..+...++ T Consensus 125 ---~~~~~~~~~~~~~~~~~~~~~~~~~e~Sa~~g--~gv~~lf~~i~ 167 (175) T d1ky3a_ 125 ---EESKKIVSEKSAQELAKSLGDIPLFLTSAKNA--INVDTAFEEIA 167 (175) T ss_dssp ---CGGGCCSCHHHHHHHHHHTTSCCEEEEBTTTT--BSHHHHHHHHH T ss_pred ---CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCC--CCHHHHHHHHH T ss_conf ---10014320899999999708950899751689--77889999999 No 16 >d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6} Probab=99.03 E-value=4.9e-10 Score=78.92 Aligned_columns=153 Identities=20% Q ss_pred EEEEECCCCCHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEEE Q ss_conf 8998659886377777552-766788875310002211101578711178889715785420211000042351206778 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCL-DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl-~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~vi 112 (351) |+++|..|+|||||++|+. .+.....+|.+.++ -....++. ..++|+++|...+..+.+.-++.-. .++ T Consensus 15 i~iiG~~~vGKSsll~~~~~~~~~~~~~t~~~~~---~~i~~~~~---~~~l~D~~g~~~~~~~~~~~~~~~d----~ii 84 (173) T d1e0sa_ 15 ILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV---ETVTYKNV---KFNVWDVGGQDKIRPLWRHYYTGTQ----GLI 84 (173) T ss_dssp EEEEEETTSSHHHHHHHTTCCCCEEEEEETTEEE---EEEEETTE---EEEEEEESCCGGGHHHHGGGTTTCC----EEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCEECCEEEEE---EEEEEEEE---EEEEEECCCCHHHHHHHHHHCCCCC----EEE T ss_conf 9998179987999999985385430220204899---98400369---9998644741156889998505886----899 Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCC Q ss_conf 88736984689999999999999999999999852695378999999998414667760011106887799712100015 Q Ver_Hs_NP_0570 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQ 192 (351) Q Consensus 113 ivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F~ 192 (351) +|+|++.|+++-...++| .+++......+ +|++|||+|.|.-. T Consensus 85 ~v~d~~~~~s~~~~~~~l--------~~i~~~~~~~~-----------------------------~piiiv~NK~Dl~~ 127 (173) T d1e0sa_ 85 FVVDCADRDRIDEARQEL--------HRIINDREMRD-----------------------------AIILIFANKQDLPD 127 (173) T ss_dssp EEEETTCGGGHHHHHHHH--------HHHHTSGGGTT-----------------------------CEEEEEEECTTSTT T ss_pred EEEECCCCCCHHHHHHHH--------HHHHHHHCCCC-----------------------------CEEEEEEECCCCCC T ss_conf 999738831378999999--------99986413798-----------------------------54899864058765 Q ss_pred CCCHHHHHHHHHHHH-HHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 887667899999999-9998609468885120345678999888750 Q Ver_Hs_NP_0570 193 DFESEKRKVICKTLR-FVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 193 ~~D~e~rK~i~r~LR-~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) ...++. +.+.|. ..++..+...+.+|-... -.+..+++++. T Consensus 128 ~~~~~e---~~~~l~l~~~~~~~~~~~~~SA~tg--eGi~e~~~~l~ 169 (173) T d1e0sa_ 128 AMKPHE---IQEKLGLTRIRDRNWYVQPSCATSG--DGLYEGLTWLT 169 (173) T ss_dssp CCCHHH---HHHHTTGGGCCSSCEEEEECBTTTT--BTHHHHHHHHH T ss_pred CCCHHH---HHHHHHHHHHCCCCEEEEEEECCCC--CCHHHHHHHHH T ss_conf 679999---9999888751458737999752569--98899999999 No 17 >d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2} Probab=99.02 E-value=1.3e-09 Score=76.34 Aligned_columns=123 Identities=20% Q ss_pred CCEEEEEECCCCCHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEE Q ss_conf 7458998659886377777552-766788875310002211101578711178889715785420211000042351206 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCL-DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTF 109 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl-~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~ 109 (351) |-.++++|..|+|||||++++. ++.....||.+..+ ..-..++- ..++|++||...+..+..--++... T Consensus 2 ~~ki~i~G~~~~GKTsLl~~l~~~~~~~~~~t~~~~~---~~i~~~~~---~~~l~D~~G~~~~~~~~~~~~~~~d---- 71 (165) T d1ksha_ 2 ELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNI---KTLEHRGF---KLNIWDVGGQKSLRSYWRNYFESTD---- 71 (165) T ss_dssp CEEEEEECSTTSSHHHHHHHHTTCCCSSCCCCSSEEE---EEEEETTE---EEEEEEECCSHHHHTTGGGGCTTCS---- T ss_pred EEEEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEE---EEECCCEE---EEEEECCCCCHHHHHHHHHHHCCCC---- T ss_conf 1789998179998999999983782046655787556---53058358---9998406751022335788732220---- Q ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEC Q ss_conf 77888736984689999999999999999999999852695378999999998414667760011106887799712100 Q Ver_Hs_NP_0570 110 SLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYD 189 (351) Q Consensus 110 ~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD 189 (351) .+++|+|.+.|+++-+..+++ .+++......+ +|++|||+|.| T Consensus 72 ~ii~v~d~~~~~~~~~~~~~l--------~~~~~~~~~~~-----------------------------~piiiv~nK~D 114 (165) T d1ksha_ 72 GLIWVVDSADRQRMQDCQREL--------QSLLVEERLAG-----------------------------ATLLIFANKQD 114 (165) T ss_dssp EEEEEEETTCGGGHHHHHHHH--------HHHHTCGGGTT-----------------------------CEEEEEEECTT T ss_pred HHHHHHHHHCCCCHHHHHHHH--------HHHHHHHHHCC-----------------------------CEEEEEEECCC T ss_conf 322322310568888999999--------99985553079-----------------------------60899987468 Q ss_pred CCCCCCHHHHH Q ss_conf 01588766789 Q Ver_Hs_NP_0570 190 VFQDFESEKRK 200 (351) Q Consensus 190 ~F~~~D~e~rK 200 (351) .-.....+.-+ T Consensus 115 l~~~~~~~~i~ 125 (165) T d1ksha_ 115 LPGALSCNAIQ 125 (165) T ss_dssp STTCCCHHHHH T ss_pred CCCCCCHHHHH T ss_conf 86547888999 No 18 >d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus)} Probab=98.99 E-value=3.1e-09 Score=73.93 Aligned_columns=156 Identities=15% Q ss_pred EEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEEEE Q ss_conf 89986598863777775527667888753100022111015787111788897157854202110000423512067788 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVL 113 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~vii 113 (351) |+++|+.|+||||||+|+....-.+..+.....++......-.......++|..+|......+-......... +++ T Consensus 8 I~ivG~~~vGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~----~i~ 83 (169) T d3raba_ 8 ILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMG----FIL 83 (169) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGHHHHHTTTTTCCE----EEE T ss_pred EEEEECCCCCHHHHHHHHHCCEECCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHEE----EEE T ss_conf 8998369987999999985680034521123421136777645820367872167630233454443211101----133 Q ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCCC Q ss_conf 87369846899999999999999999999998526953789999999984146677600111068877997121000158 Q Ver_Hs_NP_0570 114 VLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQD 193 (351) Q Consensus 114 vlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F~~ 193 (351) |+|.+.+.. +..++.|+..+.... ...+|+++||+|.|.... T Consensus 84 v~d~~~~~s-~~~~~~~~~~i~~~~-------------------------------------~~~~pii~v~nK~D~~~~ 125 (169) T d3raba_ 84 MYDITNEES-FNAVQDWSTQIKTYS-------------------------------------WDNAQVLLVGNKCDMEDE 125 (169) T ss_dssp EEETTCHHH-HHTHHHHHHHHHHHC-------------------------------------CSCCEEEEEEECTTCGGG T ss_pred EEECCCCCH-HHHHHHHHHHHHHCC-------------------------------------CCCCEEEEHHHHCCHHHH T ss_conf 320222210-345566655532101-------------------------------------377326850121241330 Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 194 FESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 194 ~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) ......+. +.++-.+|+..+++|-... ..+..++..++ T Consensus 126 ~~~~~~~~-----~~~~~~~~~~~~e~Sa~~~--~gi~e~f~~l~ 163 (169) T d3raba_ 126 RVVSSERG-----RQLADHLGFEFFEASAKDN--INVKQTFERLV 163 (169) T ss_dssp CCSCHHHH-----HHHHHHHTCEEEECBTTTT--BSHHHHHHHHH T ss_pred CCCCHHHH-----HHHHHHCCCEEEEEECCCC--CCHHHHHHHHH T ss_conf 04428999-----9999964980899862689--88889999999 No 19 >d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3} Probab=98.97 E-value=8e-10 Score=77.56 Aligned_columns=165 Identities=15% Q ss_pred HHCCCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCH Q ss_conf 52257666110111257458998659886377777552-76678887531000221110157871117888971578542 Q Ver_Hs_NP_0570 15 EKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCL-DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSL 93 (351) Q Consensus 15 ~~~~~~~~~~~~~~~~ek~v~~vGsk~~GKTTli~Rfl-~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~l 93 (351) +.+..++-+-. |.++|..|+||||||+|+. .+.....||++..+ .+-...+. ..++|+++|.-.+ T Consensus 8 ~~~~~~~~~~k--------i~ivG~~~~GKTsli~~l~~~~~~~~~~t~~~~~---~~i~~~~~---~~~i~d~~G~~~~ 73 (176) T d1fzqa_ 8 KLKSAPDQEVR--------ILLLGLDNAGKTTLLKQLASEDISHITPTQGFNI---KSVQSQGF---KLNVWDIGGQRKI 73 (176) T ss_dssp HCSSCCSSCEE--------EEEEESTTSSHHHHHHHHCCSCCEEEEEETTEEE---EEEEETTE---EEEEEECSSCGGG T ss_pred HHCCCCCCEEE--------EEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEE---EEEECEEE---EEEECCCCCHHHH T ss_conf 72489986479--------9998079997899999984576431023478887---54311045---2100357401356 Q ss_pred HHCEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC Q ss_conf 02110000423512067788873698468999999999999999999999985269537899999999841466776001 Q Ver_Hs_NP_0570 94 LDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHEL 173 (351) Q Consensus 94 s~Li~ipit~~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~ 173 (351) ..+.+.-+.... .+++|+|.+.++.+=...+++ .++++.....+ T Consensus 74 ~~~~~~~~~~~~----~~ilv~d~~~~~s~~~~~~~~--------~~~l~~~~~~~------------------------ 117 (176) T d1fzqa_ 74 RPYWRSYFENTD----ILIYVIDSADRKRFEETGQEL--------TELLEEEKLSC------------------------ 117 (176) T ss_dssp HHHHHHHHTTCS----EEEEEEETTCGGGHHHHHHHH--------HHHTTCGGGTT------------------------ T ss_pred HHHHHHHHCCCC----EEEEEEECCCCCCHHHHHHHH--------HHHHHCCCCCC------------------------ T ss_conf 788888521686----489998256756678899999--------99973235575------------------------ Q ss_pred CCCCCCCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 11068877997121000158876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 174 IDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 174 v~p~piPlvIVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) +|+++||+|.|. .......++.-.--..-+...+...+.+|-... ..+..++.-++ T Consensus 118 -----~piiiv~nK~Dl--~~~~~~~ei~~~l~~~~~~~~~~~i~~~Sa~tg--~gi~e~~~~i~ 173 (176) T d1fzqa_ 118 -----VPVLIFANKQDL--LTAAPASEIAEGLNLHTIRDRVWQIQSCSALTG--EGVQDGMNWVC 173 (176) T ss_dssp -----CCEEEEEECTTS--TTCCCHHHHHHHTTGGGCCSSCEEEEECCTTTC--TTHHHHHHHHH T ss_pred -----EEEEEEEECCCC--CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC--CCHHHHHHHHH T ss_conf -----058999822588--654788899999636654117826999853569--88899999999 No 20 >d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1} Probab=98.96 E-value=2.2e-09 Score=74.86 Aligned_columns=155 Identities=21% Q ss_pred EEEEECCCCCHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEEE Q ss_conf 8998659886377777552-766788875310002211101578711178889715785420211000042351206778 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCL-DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl-~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~vi 112 (351) |+++|..|+|||||++++. ++.....||.+..+ .....++. ...+|++||...+..+..-.++... .++ T Consensus 3 i~iiG~~~~GKSsLi~~l~~~~~~~~~~t~~~~~---~~i~~~~~---~~~~~D~~g~~~~~~~~~~~~~~~~----~ii 72 (160) T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV---ETVEYKNI---SFTVWDVGGQDKIRPLWRHYFQNTQ----GLI 72 (160) T ss_dssp EEEECSTTSSHHHHHHHHHHHCSSCCCCCSSCCE---EEEECSSC---EEEEEECCCCGGGHHHHHHHTTTCS----EEE T ss_pred EEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEE---EEEEEEEE---EEEEECCCCCCCHHHHHHHHHCCCC----EEE T ss_conf 8998079998999999984682022220015899---99973478---9987036644201122354403781----899 Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCC Q ss_conf 88736984689999999999999999999999852695378999999998414667760011106887799712100015 Q Ver_Hs_NP_0570 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQ 192 (351) Q Consensus 113 ivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F~ 192 (351) +|+|.+.+..+-+...+| .++++.....+ +|++|||+|.|.-. T Consensus 73 ~v~d~~~~~s~~~~~~~~--------~~~~~~~~~~~-----------------------------~piiiv~NK~Dl~~ 115 (160) T d1r8sa_ 73 FVVDSNDRERVNEAREEL--------MRMLAEDELRD-----------------------------AVLLVFANKQDLPN 115 (160) T ss_dssp EEEETTCGGGHHHHHHHH--------HHHHTCGGGTT-----------------------------CEEEEEEECTTSTT T ss_pred EEEECCCCHHHHHHHHHH--------HHHHHHHCCCC-----------------------------CEEEEEEECCCCCC T ss_conf 997145620268899999--------99985230278-----------------------------61689986358853 Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH--HHHHHHHH Q ss_conf 8876678999999999998609468885120345678--99988875 Q Ver_Hs_NP_0570 193 DFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK--IRGVINQL 237 (351) Q Consensus 193 ~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r--~r~~inhl 237 (351) ....+ ..........+...+...+.+|-....-.. +.-+.+|+ T Consensus 116 ~~~~~--e~~~~l~~~~~~~~~~~~~~~SA~~g~Gi~e~~~~l~~~~ 160 (160) T d1r8sa_ 116 AMNAA--EITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160 (160) T ss_dssp CCCHH--HHHHHTTGGGCSSCCEEEEECBTTTTBTHHHHHHHHHHHC T ss_pred CCCHH--HHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHC T ss_conf 24678--8999988874144881799986357998899999999719 No 21 >d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus)} Probab=98.91 E-value=2.1e-09 Score=74.92 Aligned_columns=177 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 8998659886377777552766--78887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDRD--EPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r~--e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|..|+|||||++|+..+. +...||+..++.+-.-.. +.......+|+.++-.........-+... ..+ T Consensus 5 i~ivG~~nvGKSsLl~~l~~~~~~~~~~~t~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~ 78 (184) T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMV--DDRLVTMQIWDTAGQERFQSLGVAFYRGA----DCC 78 (184) T ss_dssp EEEECCTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEES--SSCEEEEEEEEECSSGGGSCSCCGGGTTC----SEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEE--CCCCCEEEEECCCCCHHHHHHHHHHHHHH----HHH T ss_conf 999807998799999998668013453565125889999986--35321256505752024556788886654----443 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|.+.+..+...-.++ ..+...+.... +-.+|+++||+|.|+ T Consensus 79 i~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~--------------------------~~~~piiiv~nK~Dl- 123 (184) T d1vg8a_ 79 VLVFDVTAPNTFKTLDSWR--------DEFLIQASPRD--------------------------PENFPFVVLGNKIDL- 123 (184) T ss_dssp EEEEETTCHHHHHTHHHHH--------HHHHHHHCCSS--------------------------GGGSCEEEEEECTTS- T ss_pred HHHHHHCCCCCHHHHHHHH--------HHHHHHHHCCC--------------------------CCCCCEEEECCCCCC- T ss_conf 3211102543056788888--------99998730134--------------------------477537898256452- Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH-HHHHHHHHHCCCCCCCEEEEECCCCE Q ss_conf 58876678999999999998609468885120345678-99988875057777730575067757 Q Ver_Hs_NP_0570 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGIDKSKSICVDQNKPL 255 (351) Q Consensus 192 ~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r-~r~~inhl~FG~~~~k~~~~D~~kPl 255 (351) .+.+...-...++.+-..+...+++|-...-... +-..|...++.-..-.....++..|| T Consensus 124 ----~~~~~~~~~~~~~~~~~~~~~~~~~Sak~g~gi~e~f~~i~~~~l~~~~e~e~~~~~~~~~ 184 (184) T d1vg8a_ 124 ----ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPI 184 (184) T ss_dssp ----SCCCSCHHHHHHHHHHTTSCCEEECBTTTTBSHHHHHHHHHHHHHHHHHHHHHHHHSCCCC T ss_pred ----CHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCC T ss_conf ----0000114899999998449828998527898888999999999972251223423688999 No 22 >d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)} Probab=98.83 E-value=1.2e-08 Score=70.24 Aligned_columns=120 Identities=27% Q ss_pred EEEEECCCCCHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEEE Q ss_conf 8998659886377777552-766788875310002211101578711178889715785420211000042351206778 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCL-DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl-~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~vi 112 (351) |+++|..|+|||||++|+. .+.....||....+ ......+. -.++|+.+|...+..+..--+. ..-.++ T Consensus 16 I~lvG~~~~GKTsll~~l~~~~~~~~~~t~~~~~---~~i~~~~~---~~~i~d~~g~~~~~~~~~~~~~----~~~~ii 85 (186) T d1f6ba_ 16 LVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTS---EELTIAGM---TFTTFDLGGHIQARRVWKNYLP----AINGIV 85 (186) T ss_dssp EEEEEETTSSHHHHHHHHSCC------CCCCCSC---EEEEETTE---EEEEEEECC----CCGGGGGGG----GCSEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEE---EEEEEEEE---EEEEEECCCHHHHHHHHHHHHC----CCCEEE T ss_conf 9998169997999999984681543022688878---99851147---8998405521344677787740----555588 Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCC Q ss_conf 88736984689999999999999999999999852695378999999998414667760011106887799712100015 Q Ver_Hs_NP_0570 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQ 192 (351) Q Consensus 113 ivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F~ 192 (351) +|+|.+++..+-...+.| ..+.......+ +|++|||+|.|... T Consensus 86 ~v~D~~d~~~~~~~~~~l--------~~~~~~~~~~~-----------------------------~piiiv~NK~Dl~~ 128 (186) T d1f6ba_ 86 FLVDCADHERLLESKEEL--------DSLMTDETIAN-----------------------------VPILILGNKIDRPE 128 (186) T ss_dssp EEEETTCGGGHHHHHHHH--------HHHHTCGGGTT-----------------------------SCEEEEEECTTSTT T ss_pred EEEECCCCCCHHHHHHHH--------HHHHHHHHCCC-----------------------------CEEEEEECCCCCCC T ss_conf 885245756667899999--------99874010179-----------------------------60899852657520 Q ss_pred CCCHHHHH Q ss_conf 88766789 Q Ver_Hs_NP_0570 193 DFESEKRK 200 (351) Q Consensus 193 ~~D~e~rK 200 (351) ....+... T Consensus 129 ~~~~~ei~ 136 (186) T d1f6ba_ 129 AISEERLR 136 (186) T ss_dssp CCCHHHHH T ss_pred CCCHHHHH T ss_conf 58989999 No 23 >d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae)} Probab=98.83 E-value=1.5e-08 Score=69.69 Aligned_columns=137 Identities=16% Q ss_pred EEEEEECCCCCHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 58998659886377777552-76678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCL-DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl-~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) .|+++|..|+|||||++++. ++....-||..-...+.-+.. ...+|.++|-..+..+..--+...--..-.+ T Consensus 5 ~V~i~G~~~~GKTsLl~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~liDtpG~~~~~~~~~~~~~~~~~~~d~i 77 (209) T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSAADYDGS-------GVTLVDFPGHVKLRYKLSDYLKTRAKFVKGL 77 (209) T ss_dssp EEEEECSTTSSHHHHHHHHHHSSCCCBCCCSSCEEETTGGGS-------SCEEEECCCCGGGTHHHHHHHHHHGGGEEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCEECCEEEEEEEECCE-------EEEEEECCCCHHHHHHHHHHHHHHCCCCEEE T ss_conf 899983699978999999846831330201004889863677-------9999874572236899999998633673289 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++|+|-+...+-+.....||..+..... ...+-.+|++|+|+|.|.+ T Consensus 78 I~VvDs~~~~~~~~~~~~~l~~il~~~~---------------------------------~~~~~~vPiii~~NK~Dl~ 124 (209) T d1nrjb_ 78 IFMVDSTVDPKKLTTTAEFLVDILSITE---------------------------------SSCENGIDILIACNKSELF 124 (209) T ss_dssp EEEEETTSCTTCCHHHHHHHHHHHHHHH---------------------------------HHSTTCCCEEEEEECTTST T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHH---------------------------------HHHHCCCCEEEEEECCCCC T ss_conf 9997537774237999999999999987---------------------------------5431589389998554778 Q ss_pred CCCCHHH-HHHHHHHHHHH Q ss_conf 5887667-89999999999 Q Ver_Hs_NP_0570 192 QDFESEK-RKVICKTLRFV 209 (351) Q Consensus 192 ~~~D~e~-rK~i~r~LR~i 209 (351) ...+++. +..+.+-|-.+ T Consensus 125 ~a~~~~~i~~~le~ei~~i 143 (209) T d1nrjb_ 125 TARPPSKIKDALESEIQKV 143 (209) T ss_dssp TCCCHHHHHHHHHHHHHHH T ss_pred CCCCHHHHHHHHHHHHHHH T ss_conf 8989899999999987799 No 24 >d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)} Probab=98.81 E-value=3.2e-08 Score=67.66 Aligned_columns=153 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEE Q ss_conf 899865988637777755276--678887531000221110157871117888971578542021100004235120677 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDR--DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSL 111 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r--~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~v 111 (351) |+++|..|+|||||++||... .+.+.+|..-.| .+..-.+...-..++|+..|.-.... .+........+ T Consensus 6 i~lvG~~nvGKSsLi~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~d~~g~~~~~~-----~~~~~~~~~~~ 77 (166) T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSY---RKQVVIDGETCLLDILDTAGQEEYSA-----MRDQYMRTGEG 77 (166) T ss_dssp EEEEESTTSSHHHHHHHHHHCCCCCSCCCCSEEEE---EEEEEETTEEEEEEEEEECCCGGGHH-----HHHHHHHHCSE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEE---EEEEEEEEEEEEEEEEECCCCCHHHH-----HHHHHHHHHHH T ss_conf 99981799879999999864811334245553367---99999810377888751356200012-----22101000133 Q ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCC Q ss_conf 88873698468999999999999999999999985269537899999999841466776001110688779971210001 Q Ver_Hs_NP_0570 112 VLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVF 191 (351) Q Consensus 112 iivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F 191 (351) ++++-...-...+.....|......... ....|++|||+|.|+- T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~iiiv~nK~Dl~ 121 (166) T d1ctqa_ 78 FLCVFAINNTKSFEDIHQYREQIKRVKD------------------------------------SDDVPMVLVGNKCDLA 121 (166) T ss_dssp EEEEEETTCHHHHHTHHHHHHHHHHHHT------------------------------------CSSCCEEEEEECTTCS T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHCCC------------------------------------CCCCEEEEEECCCCHH T ss_conf 2222211010000001356655542013------------------------------------4782699970224633 Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 58876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 192 QDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 192 ~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) +...++.. .+.+|..+|+..+++|-... ..+..+...++ T Consensus 122 ~~~~~~~~------~~~~~~~~~~~~~e~Sak~g--~gi~e~f~~l~ 160 (166) T d1ctqa_ 122 ARTVESRQ------AQDLARSYGIPYIETSAKTR--QGVEDAFYTLV 160 (166) T ss_dssp CCCSCHHH------HHHHHHHHTCCEEECCTTTC--TTHHHHHHHHH T ss_pred HCCCCHHH------HHHHHHHCCCCEEEEECCCC--CCHHHHHHHHH T ss_conf 50567899------99999963991899862689--88889999999 No 25 >d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus} Probab=98.72 E-value=3.1e-08 Score=67.71 Aligned_columns=152 Identities=23% Q ss_pred EEEEEECCCCCHHHHHHHHCCCCC---CCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEE Q ss_conf 589986598863777775527667---88875310002211101578711178889715785420211000042351206 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCLDRDE---PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTF 109 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl~r~e---~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~ 109 (351) +|.++|..|+|||||++++++... .++|.+-.+..++.-..++. ..++|..+|.-.......--+....++.. T Consensus 7 ~I~ivG~~n~GKSTLin~l~~~~~~~~~~~~~tT~~~~~~~~~~~~~----~~~~~DtpG~~~~~~~~~~~~~~~~~~~i 82 (178) T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRR----QIVFVDTPGLHKPMDALGEFMDQEVYEAL 82 (178) T ss_dssp EEEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEEEEEETTE----EEEEEECCCCCCCCSHHHHHHHHHHHHHT T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCEECCCCCEEEEEEEEEEECCCE----EEEEECCCCCCCHHHHHHHHHHHCCCCHH T ss_conf 68998349987899999984551100015551467654320003762----15885463110001234454320000101 Q ss_pred ----EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEC Q ss_conf ----7788873698468999999999999999999999985269537899999999841466776001110688779971 Q Ver_Hs_NP_0570 110 ----SLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIG 185 (351) Q Consensus 110 ----~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg 185 (351) .+++|+|.+.+ +...-+.|++.++... ...|+++|+ T Consensus 83 ~~~d~ii~viD~~~~--~~~~~~~~~~~l~~~~--------------------------------------~~~piiiv~ 122 (178) T d1wf3a1 83 ADVNAVVWVVDLRHP--PTPEDELVARALKPLV--------------------------------------GKVPILLVG 122 (178) T ss_dssp SSCSEEEEEEETTSC--CCHHHHHHHHHHGGGT--------------------------------------TTSCEEEEE T ss_pred HHCCEEEEECCCCCC--CCHHHHHHHHHHHHHH--------------------------------------CCCCCEEEC T ss_conf 012213552145566--4456788999999862--------------------------------------036421100 Q ss_pred CEECCCCCCCHHHHHHHHHHHHHHHHHCC-CEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 21000158876678999999999998609-468885120345678999888750 Q Ver_Hs_NP_0570 186 SKYDVFQDFESEKRKVICKTLRFVAHYYG-ASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 186 ~KYD~F~~~D~e~rK~i~r~LR~iAH~yG-A~L~FtSk~e~l~~r~r~~inhl~ 238 (351) +|.|..+. ....++.+....+ +..++.|-... ..+..+++.++ T Consensus 123 NK~Dl~~~--------~~~~~~~~~~~~~~~~~~~vSa~~~--~gi~~L~~~i~ 166 (178) T d1wf3a1 123 NKLDAAKY--------PEEAMKAYHELLPEAEPRMLSALDE--RQVAELKADLL 166 (178) T ss_dssp ECGGGCSS--------HHHHHHHHHHTSTTSEEEECCTTCH--HHHHHHHHHHH T ss_pred CCCCCCCC--------HHHHHHHHHHHCCCCCEEEEECCCC--CCHHHHHHHHH T ss_conf 56676568--------5789999998428997799851478--78889999999 No 26 >d1m2ob_ c.37.1.8 (B:) SAR1 {Baker's yeast (Saccharomyces cerevisiae)} Probab=98.68 E-value=1.3e-07 Score=63.98 Aligned_columns=120 Identities=27% Q ss_pred EEEEECCCCCHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEEE Q ss_conf 8998659886377777552-766788875310002211101578711178889715785420211000042351206778 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCL-DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl-~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~vi 112 (351) |+++|..|+|||||++++. .+....-||.+..+.-..... ....+|..+|.-.+.......+.. ...++ T Consensus 3 I~iiG~~n~GKTtLi~~l~~~~~~~~~~t~~~~~~~~~~~~------~~~~i~d~~~~~~~~~~~~~~~~~----~~~ii 72 (167) T d1m2ob_ 3 LLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGN------IKFTTFDLGGHIQARRLWKDYFPE----VNGIV 72 (167) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCCCCCCCSCEEEEEEETT------EEEEEEECCCSGGGTTSGGGGCTT----CCEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCEEEE------EEEEEEEEECHHHHCCCHHHHHCC----CCEEE T ss_conf 89983699989999999837921245446766762030047------899985310011210001233236----51789 Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCC Q ss_conf 88736984689999999999999999999999852695378999999998414667760011106887799712100015 Q Ver_Hs_NP_0570 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQ 192 (351) Q Consensus 113 ivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F~ 192 (351) +|+|.+.+.++=...+++ .+++......+ +|++|||+|.|... T Consensus 73 ~v~D~~~~~~~~~~~~~l--------~~~~~~~~~~~-----------------------------~piiiv~nK~Dl~~ 115 (167) T d1m2ob_ 73 FLVDAADPERFDEARVEL--------DALFNIAELKD-----------------------------VPFVILGNKIDAPN 115 (167) T ss_dssp EEEETTCGGGHHHHHHHH--------HHHHTCGGGTT-----------------------------CCEEEEEECTTSTT T ss_pred EECCCCCCCCHHHHHHHH--------HHHHHHHHCCC-----------------------------CEEEEEEECCCCCC T ss_conf 970457745667899999--------99986332079-----------------------------80899973348865 Q ss_pred CCCHHHHH Q ss_conf 88766789 Q Ver_Hs_NP_0570 193 DFESEKRK 200 (351) Q Consensus 193 ~~D~e~rK 200 (351) ....+.-+ T Consensus 116 ~~~~~ei~ 123 (167) T d1m2ob_ 116 AVSEAELR 123 (167) T ss_dssp CCCHHHHH T ss_pred CCCHHHHH T ss_conf 67988999 No 27 >d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae)} Probab=98.60 E-value=3.3e-07 Score=61.37 Aligned_columns=159 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEEEE Q ss_conf 89986598863777775527667888753100022111015787111788897157854202110000423512067788 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVL 113 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~vii 113 (351) |+++|..|+||||||+|+....=...........+..+........-..++|..+|-.....+...-..... .+++ T Consensus 6 i~ivG~~~vGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~----~~i~ 81 (170) T d1ek0a_ 6 LVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQ----AALV 81 (170) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGHHHHHTTCS----EEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCC----EEEE T ss_conf 999807998899999998668101241343313665676665470279986237651455555577774120----4577 Q ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCCC Q ss_conf 87369846899999999999999999999998526953789999999984146677600111068877997121000158 Q Ver_Hs_NP_0570 114 VLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQD 193 (351) Q Consensus 114 vlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F~~ 193 (351) |.|++.+..+=..-.+| ..+........+ +++||+|.|..+. T Consensus 82 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~------------------------------~iiv~nK~Dl~~~ 123 (170) T d1ek0a_ 82 VYDVTKPQSFIKARHWV--------KELHEQASKDII------------------------------IALVGNKIDMLQE 123 (170) T ss_dssp EEETTCHHHHHHHHHHH--------HHHHHHSCTTCE------------------------------EEEEEECGGGGGS T ss_pred EEEECCCCCHHHHHHHH--------HHHHHHHHCCCC------------------------------CEEEECCHHHHHH T ss_conf 76411223367899998--------887532102431------------------------------1010000001221 Q ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 194 FESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 194 ~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) ..... +.-.-.+.+|-.+++..+.+|-... -.+..+.+.++ T Consensus 124 ~~~~~--i~~~~~~~~~~~~~~~~~~~Sa~~g--~gI~elf~~i~ 164 (170) T d1ek0a_ 124 GGERK--VAREEGEKLAEEKGLLFFETSAKTG--ENVNDVFLGIG 164 (170) T ss_dssp SCCCC--SCHHHHHHHHHHHTCEEEECCTTTC--TTHHHHHHHHH T ss_pred CCCCC--HHHHHHHHHHHHCCCEEEEEECCCC--CCHHHHHHHHH T ss_conf 01122--0089999999964984999862688--78889999999 No 28 >d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus)} Probab=98.59 E-value=3.6e-08 Score=67.36 Aligned_columns=114 Identities=18% Q ss_pred CCEEEEEECCCCCHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCE Q ss_conf 7458998659886377777552--76678887531000221110157871117888971578542021100004235120 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCL--DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRT 108 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl--~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~ 108 (351) +-.|+++|..|+|||||++||. ......-++.-+++ .+--..+|.+||-.....+..--++. . T Consensus 2 ~~ki~~lG~~~vGKTsll~~~~~~~~~~~~~~~~~~~~-----------~~~~l~i~D~~G~~~~~~~~~~~~~~----~ 66 (195) T d1svsa1 2 EVKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTF-----------KDLHFKMFDVGGQRSERKKWIHCFEG----V 66 (195) T ss_dssp EEEEEEECSTTSSHHHHHHHHHHHHSCCCSEEEEEEEE-----------TTEEEEEEEECCSGGGGGGGGGGCTT----C T ss_pred EEEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEEE-----------EEEEEEEEECCCCHHHHHHHHHHHCC----C T ss_conf 07899982499867787654315841242179999986-----------47999998647751577777865069----9 Q ss_pred EEEEEEEECCCHHHHHH------HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE Q ss_conf 67788873698468999------999999999999999999985269537899999999841466776001110688779 Q Ver_Hs_NP_0570 109 FSLVLVLDLSKPNDLWP------TMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLV 182 (351) Q Consensus 109 ~~viivlDlSkP~~lw~------tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlv 182 (351) -.+++|+|+|..++.-. .++.|+...+.-+. .-.+-.+|++ T Consensus 67 ~~~i~V~Disd~~s~~~~~~~~~~l~~~~~~~~~i~~---------------------------------~~~~~~~pii 113 (195) T d1svsa1 67 TAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICN---------------------------------NKWFTDTSII 113 (195) T ss_dssp SEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHT---------------------------------CGGGTTSEEE T ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------------CCCCCCCEEE T ss_conf 7589998658602346666445679999999999741---------------------------------4577896699 Q ss_pred EECCEECCCC Q ss_conf 9712100015 Q Ver_Hs_NP_0570 183 IIGSKYDVFQ 192 (351) Q Consensus 183 IVg~KYD~F~ 192 (351) |||+|+|+++ T Consensus 114 lv~NK~Dl~~ 123 (195) T d1svsa1 114 LFLNKKDLFE 123 (195) T ss_dssp EEEECHHHHH T ss_pred EEECCCCHHH T ss_conf 9833862032 No 29 >d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1} Probab=98.59 E-value=8.8e-08 Score=64.94 Aligned_columns=118 Identities=22% Q ss_pred EEEEECCCCCHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEEE Q ss_conf 8998659886377777552-766788875310002211101578711178889715785420211000042351206778 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCL-DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl-~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~vi 112 (351) |+|||..|+|||||++|+. .+.....+|.+..+ ......+. ..++|++||......+....... ...++ T Consensus 20 i~ivG~~n~GKSSLi~~l~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~----~~~~i 89 (182) T d1moza_ 20 ILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNV---ETLSYKNL---KLNVWDLGGQTSIRPYWRCYYAD----TAAVI 89 (182) T ss_dssp EEEEEETTSSHHHHHHHTCCSEEEEECSSTTCCE---EEEEETTE---EEEEEEEC----CCTTGGGTTTT----EEEEE T ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEE---EEEEECCC---CEEECCCCCCHHHHHHHHHHHHC----CCEEE T ss_conf 9998179986899999875011001110024578---98750475---21210465211234555654102----32357 Q ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEECCCC Q ss_conf 88736984689999999999999999999999852695378999999998414667760011106887799712100015 Q Ver_Hs_NP_0570 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQ 192 (351) Q Consensus 113 ivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD~F~ 192 (351) +|+|++.+..+-+..++|..... ......+|++|||+|.|... T Consensus 90 ~v~d~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~p~iiv~nK~Dl~~ 132 (182) T d1moza_ 90 FVVDSTDKDRMSTASKELHLMLQ-------------------------------------EEELQDAALLVFANKQDQPG 132 (182) T ss_dssp EEEETTCTTTHHHHHHHHHHHTT-------------------------------------SSTTSSCEEEEEEECTTSTT T ss_pred EEEEECCCCCHHHHHHHHHHHHH-------------------------------------HHHCCCCCEEEEEECCCCCC T ss_conf 89860345677789999999987-------------------------------------53016863489985258732 Q ss_pred CCCHHH Q ss_conf 887667 Q Ver_Hs_NP_0570 193 DFESEK 198 (351) Q Consensus 193 ~~D~e~ 198 (351) ....+. T Consensus 133 ~~~~~~ 138 (182) T d1moza_ 133 ALSASE 138 (182) T ss_dssp CCCHHH T ss_pred CCCHHH T ss_conf 146567 No 30 >d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1} Probab=98.56 E-value=4.1e-07 Score=60.77 Aligned_columns=157 Identities=21% Q ss_pred CCEEEEEECCCCCHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEE Q ss_conf 7458998659886377777552-766788875310002211101578711178889715785420211000042351206 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCL-DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTF 109 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl-~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~ 109 (351) |-.+.++|..|+||||||+++. ++.....++.+..+ ......+. -.++|.++|.......-...+..... T Consensus 5 ~~ki~iiG~~nvGKSsLi~~l~~~~~~~~~~~~~~~~---~~~~~~~~---~~~i~d~~~~~~~~~~~~~~~~~~~~--- 75 (169) T d1upta_ 5 EMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNV---ETVTYKNL---KFQVWDLGGLTSIRPYWRCYYSNTDA--- 75 (169) T ss_dssp CEEEEEECSTTSSHHHHHHHHHHSSCCCCCCCSSEEE---EEEEETTE---EEEEEEECCCGGGGGGGGGGCTTCSE--- T ss_pred EEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCEEEE---EEEECCCE---EEEEEECCCHHHHHHHHHHHHHHHHH--- T ss_conf 3589998179987999999985781213321212889---98623675---89998625412333344443321125--- Q ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEC Q ss_conf 77888736984689999999999999999999999852695378999999998414667760011106887799712100 Q Ver_Hs_NP_0570 110 SLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYD 189 (351) Q Consensus 110 ~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD 189 (351) +++|+|++.+..+-...+.|. .-........+|++|||+|.| T Consensus 76 -~~~v~~~~d~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~p~iiv~nK~D 117 (169) T d1upta_ 76 -VIYVVDSCDRDRIGISKSELV-------------------------------------AMLEEEELRKAILVVFANKQD 117 (169) T ss_dssp -EEEEEETTCCTTHHHHHHHHH-------------------------------------HHHTCGGGTTCEEEEEEECTT T ss_pred -HHHHHHHHCCCCHHHHHHHHH-------------------------------------HHHHCCCCCCCCEEEEECCCC T ss_conf -655554423445788999999-------------------------------------987301335510024320147 Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 0158876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 190 VFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 190 ~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) .-+...++. +.-.-....+-.++...+.+|-... ..+..++..+. T Consensus 118 l~~~~~~~~--i~~~~~~~~~~~~~~~~~~~SA~~g--~gi~e~~~~l~ 162 (169) T d1upta_ 118 MEQAMTSSE--MANSLGLPALKDRKWQIFKTSATKG--TGLDEAMEWLV 162 (169) T ss_dssp STTCCCHHH--HHHHHTGGGCTTSCEEEEECCTTTC--TTHHHHHHHHH T ss_pred CCCCCCHHH--HHHHHHHHHHHCCCCEEEEEECCCC--CCHHHHHHHHH T ss_conf 300037889--9999888886228946999853679--88899999999 No 31 >d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus} Probab=98.45 E-value=3.4e-06 Score=55.11 Aligned_columns=164 Identities=20% Q ss_pred EEEEECCCCCHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECC---CCCHHHCEEEEECCCCCCE Q ss_conf 8998659886377777552766--7888753100022111015787111788897157---8542021100004235120 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDRD--EPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG---GTSLLDLISIPITGDTLRT 108 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r~--e~~KPTlALeYtygRra~~~~~~KdvaH~WELGg---g~~ls~Li~ipit~~~l~~ 108 (351) |-++|..|+|||||++++++.. ....|+.-.++ +.............+|..+| +.....-....+...--.. T Consensus 4 I~iiG~~~~GKSSLi~~L~~~~~~~~~~~~~t~~~---~~~~~~~~~~~~i~l~D~pG~~~~~~~~~~~~~~~~~~~~~~ 80 (180) T d1udxa2 4 VGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSP---NLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIART 80 (180) T ss_dssp EEEECCGGGCHHHHHHHHCSSCCEECCCTTCSSCC---EEEEEECSSSCEEEEEECCCCCCCGGGSCCSCHHHHHHHTSS T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEECCCCCEEE---EEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH T ss_conf 48874599868999999856840132036761257---888997428840367326754456531001122221012333 Q ss_pred EEEEEEEECCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCE Q ss_conf 67788873698-46899999999999999999999998526953789999999984146677600111068877997121 Q Ver_Hs_NP_0570 109 FSLVLVLDLSK-PNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSK 187 (351) Q Consensus 109 ~~viivlDlSk-P~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~K 187 (351) ..+++|+|.+. +.+..+.+..|+........+ +|++||++| T Consensus 81 d~i~~v~d~~~~~~~~~~~~~~~l~~~~~~~~~--------------------------------------~p~iiv~NK 122 (180) T d1udxa2 81 RVLLYVLDAADEPLKTLETLRKEVGAYDPALLR--------------------------------------RPSLVALNK 122 (180) T ss_dssp SEEEEEEETTSCHHHHHHHHHHHHHHHCHHHHH--------------------------------------SCEEEEEEC T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH--------------------------------------HCCHHHHCC T ss_conf 454432001343047899999998754455321--------------------------------------000012024 Q ss_pred ECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH-HHHHHHHHHCCCCCCC Q ss_conf 000158876678999999999998609468885120345678-9998887505777773 Q Ver_Hs_NP_0570 188 YDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGIDKSK 245 (351) Q Consensus 188 YD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r-~r~~inhl~FG~~~~k 245 (351) +|... +.....++-..-..|...+++|-....-.. .+..|..+.=..+.++ T Consensus 123 ~Dl~~-------~~~~~~~~~~~~~~~~~v~~iSa~tg~Gi~eL~e~l~~~i~~~~~~~ 174 (180) T d1udxa2 123 VDLLE-------EEAVKALADALAREGLAVLPVSALTGAGLPALKEALHALVRSTPPPE 174 (180) T ss_dssp CTTSC-------HHHHHHHHHHHHTTTSCEEECCTTTCTTHHHHHHHHHHHHHTSCCCC T ss_pred CCCCC-------HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCC T ss_conf 56667-------44589999999735897899834668887899999999986268888 No 32 >d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima} Probab=98.43 E-value=1.1e-06 Score=58.08 Aligned_columns=160 Identities=16% Q ss_pred EEEEEECCCCCHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCC--- Q ss_conf 58998659886377777552766---788875310002211101578711178889715785420211000042351--- Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCLDRD---EPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTL--- 106 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl~r~---e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l--- 106 (351) .|.++|..|+|||||+++++.+. ...+|.+-.+-.++....... -..+|..+|--....+-.-....... T Consensus 10 kI~iiG~~~~GKSTLin~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~----~~~~~Dt~G~~~~~~~~~~~~~~~~~~~~ 85 (186) T d1mkya2 10 KVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGR----KYVFVDTAGLRRKSRVEPRTVEKYSNYRV 85 (186) T ss_dssp EEEEECSTTSSHHHHHHHHHTSTTEEECCC------CCCEEEEETTE----EEEESSCSCC-----------CCSCCHHH T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEECCCCEEEEEEEEEECCCCCC----EEEEECCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 79998349998889999984442213105523455541010111112----24784168741001011223434555555 Q ss_pred -----CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE Q ss_conf -----206778887369846899999999999999999999998526953789999999984146677600111068877 Q Ver_Hs_NP_0570 107 -----RTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPL 181 (351) Q Consensus 107 -----~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPl 181 (351) ..-.++.|+|.+++..-+. +.++...+. ...|+ T Consensus 86 ~~~~~~~div~~vid~~~~~~~~~--~~~~~~~~~----------------------------------------~~~p~ 123 (186) T d1mkya2 86 VDSIEKADVVVIVLDATQGITRQD--QRMAGLMER----------------------------------------RGRAS 123 (186) T ss_dssp HHHHHHCSEEEEEEETTTCCCHHH--HHHHHHHHH----------------------------------------TTCEE T ss_pred HHHHHHHCCCCEEECCCCCCHHHH--HHHHHHHHH----------------------------------------HHHHH T ss_conf 566543024202321667720457--999998775----------------------------------------00012 Q ss_pred EEECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHH-HHHHHHHHH Q ss_conf 997121000158876678999999999998609468885120345678-999888750 Q Ver_Hs_NP_0570 182 VIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLA 238 (351) Q Consensus 182 vIVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r-~r~~inhl~ 238 (351) ++|++|.|..........++....-..++.......+++|-....... +.+.|++.. T Consensus 124 iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~~~~~i~~~SA~tg~gi~~l~~~i~~~~ 181 (186) T d1mkya2 124 VVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMNLAY 181 (186) T ss_dssp EEEEECGGGSTTGGGCHHHHHHHHHHHCGGGTTSCEEECBTTTTBSHHHHHHHHHHHH T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH T ss_conf 2212310133430347999999999885214898679973467988889999999998 No 33 >d1azsc2 c.37.1.8 (C:36-66,C:202-393) Transducin (alpha subunit) {Cow (Bos taurus)} Probab=98.37 E-value=3.9e-07 Score=60.91 Aligned_columns=112 Identities=14% Q ss_pred EEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEEEEE Q ss_conf 89986598863777775527667888753100022111015787111788897157854202110000423512067788 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVL 113 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~vii 113 (351) |+++|..|+|||||++++. ..+...||++... .+...++. ..++|.+||--....+..--.. ....++. T Consensus 8 I~llG~~nvGKSSlln~l~-~~~~~~~T~g~~~---~~i~~~~~---~~~i~D~~G~~~~~~~~~~~~~----~~~~ii~ 76 (223) T d1azsc2 8 LLLLGAGESGKSTIVKQMR-ILHVNVLTSGIFE---TKFQVDKV---NFHMFDVGGQRDERRKWIQCFN----DVTAIIF 76 (223) T ss_dssp EEEEESTTSSHHHHHHHHH-HHHCCCCCCSEEE---EEEEETTE---EEEEEEECCSGGGGGGGGGGTT----TCCEEEE T ss_pred EEEEECCCCCHHHHHHHHH-CCCCEEEECCEEE---EEEEECCE---EEEEEEECCCHHHHHHHHHHHH----HHHHHHH T ss_conf 8998459987999999883-5761210014079---99997368---9999872240133345565421----0034334 Q ss_pred EEECC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE Q ss_conf 87369----------84689999999999999999999999852695378999999998414667760011106887799 Q Ver_Hs_NP_0570 114 VLDLS----------KPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVI 183 (351) Q Consensus 114 vlDlS----------kP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvI 183 (351) |+|+| .-+++=++++.| ..++....-.+ .|++| T Consensus 77 v~~~s~~~~~l~~d~~~~~~~es~~l~--------~~i~~~~~~~~-----------------------------~piIl 119 (223) T d1azsc2 77 VVASSSYNMVIREDNQTNRLQEALNLF--------KSIWNNRWLRT-----------------------------ISVIL 119 (223) T ss_dssp EEETTGGGCBCTTTSCSBHHHHHHHHH--------HHHHTCTTCSS-----------------------------CCEEE T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHH--------HHHHCCCCCCC-----------------------------CCEEE T ss_conf 546655676654421466548999999--------99852600068-----------------------------84899 Q ss_pred ECCEECCCCC Q ss_conf 7121000158 Q Ver_Hs_NP_0570 184 IGSKYDVFQD 193 (351) Q Consensus 184 Vg~KYD~F~~ 193 (351) |++|.|+|++ T Consensus 120 vlNK~DL~~~ 129 (223) T d1azsc2 120 FLNKQDLLAE 129 (223) T ss_dssp EEECHHHHHH T ss_pred EECCCHHHHH T ss_conf 9834106876 No 34 >d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli} Probab=98.30 E-value=4e-06 Score=54.63 Aligned_columns=148 Identities=21% Q ss_pred EEEEEECCCCCHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECC---------CCCHHHCEEEE Q ss_conf 58998659886377777552766---7888753100022111015787111788897157---------85420211000 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCLDRD---EPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG---------GTSLLDLISIP 100 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl~r~---e~~KPTlALeYtygRra~~~~~~KdvaH~WELGg---------g~~ls~Li~ip 100 (351) +|.++|..|+|||||+++++.++ ...++++--+..++....++. ...+|..+| ...+......- T Consensus 7 ~I~iiG~~n~GKSSLin~l~~~~~~~~~~~~~tt~~~~~~~~~~~~~----~~~~~DtpG~~~~~~~~~~~~~~~~~~~~ 82 (179) T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAY----QAIYVDTPGLHMEEKRAINRLMNKAASSS 82 (179) T ss_dssp EEEEECSSSSSHHHHHHHHHTCSEEECCCCSSCCSSCEEEEEEETTE----EEEEESSSSCCHHHHHHHHHHHTCCTTSC T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEECCCCCEEEEEEEEEEEECCC----EEEECCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 68998359997889999985674012115562566500567741100----01101578752012222223332233222 Q ss_pred ECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC Q ss_conf 04235120677888736984689999999999999999999999852695378999999998414667760011106887 Q Ver_Hs_NP_0570 101 ITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180 (351) Q Consensus 101 it~~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piP 180 (351) +..-.+ +++|+|.+++...-..+-. .+.....| T Consensus 83 ~~~~d~----vi~vvD~~~~~~~~~~~~~-------------------------------------------~~~~~~~p 115 (179) T d1egaa1 83 IGDVEL----VIFVVEGTRWTPDDEMVLN-------------------------------------------KLREGKAP 115 (179) T ss_dssp CCCEEE----EEEEEETTCCCHHHHHHHH-------------------------------------------HHHSSSSC T ss_pred HHHHHH----HHHHCCCCCCCHHHHHHHH-------------------------------------------HHHHCCCC T ss_conf 332322----0000025664024566655-------------------------------------------55530672 Q ss_pred EEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCC-CEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 7997121000158876678999999999998609-468885120345678999888750 Q Ver_Hs_NP_0570 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYG-ASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 181 lvIVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yG-A~L~FtSk~e~l~~r~r~~inhl~ 238 (351) +++|.+|.|.+.. +.-+..-+..++-..+ +..++.|-... ..+-.++..+. T Consensus 116 iIiv~NK~D~~~~-----~~~~~~~~~~~~~~~~~~~~~~iSA~~~--~gi~~l~~~i~ 167 (179) T d1egaa1 116 VILAVNKVDNVQE-----KADLLPHLQFLASQMNFLDIVPISAETG--LNVDTIAAIVR 167 (179) T ss_dssp EEEEEESTTTCCC-----HHHHHHHHHHHHTTSCCSEEEECCTTTT--TTHHHHHHHHH T ss_pred EEEECCCCCCCCC-----HHHHHHHHHHHHHHCCCCCEEEEECCCC--CCHHHHHHHHH T ss_conf 5331056233136-----5578899999998359986799733568--88889999999 No 35 >d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima} Probab=98.11 E-value=4.7e-06 Score=54.22 Aligned_columns=152 Identities=11% Q ss_pred CEEEEEECCCCCHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECC-----CCCHHHCEEEEECC Q ss_conf 458998659886377777552766---7888753100022111015787111788897157-----85420211000042 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTIILRCLDRD---EPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG-----GTSLLDLISIPITG 103 (351) Q Consensus 32 k~v~~vGsk~~GKTTli~Rfl~r~---e~~KPTlALeYtygRra~~~~~~KdvaH~WELGg-----g~~ls~Li~ipit~ 103 (351) .+|.++|..|+|||||++|+++++ ...+|.+..+..++.....+. -+.+|...| ...+.....--... T Consensus 1 a~I~iiG~~~~GKSSLin~l~~~~~~~v~~~~~~t~~~~~~~~~~~~~----~~~~~Dt~g~~~~~~~~~~~~~~~~~~~ 76 (171) T d1mkya1 1 ATVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGK----TFKLVDTCGVFDNPQDIISQKMKEVTLN 76 (171) T ss_dssp CEEEEECCTTSSHHHHHHHHHC--------------CCSEEEEEETTE----EEEEEECTTTTSSGGGCCCHHHHHHHHH T ss_pred CEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCC----EEEEECCCCCEEHHHHHHHHHHHHHHHH T ss_conf 958898259997899999984665303204563578876410112333----0343212440100000134566655444 Q ss_pred CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE Q ss_conf 35120677888736984689999999999999999999999852695378999999998414667760011106887799 Q Ver_Hs_NP_0570 104 DTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVI 183 (351) Q Consensus 104 ~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvI 183 (351) .--..-.+++|+|.+++....+ ..+++.++..- .|+++ T Consensus 77 ~~~~ad~ii~vid~~~~~~~~~--~~~~~~l~~~~----------------------------------------~~ii~ 114 (171) T d1mkya1 77 MIREADLVLFVVDGKRGITKED--ESLADFLRKST----------------------------------------VDTIL 114 (171) T ss_dssp HHTTCSEEEEEEETTTCCCHHH--HHHHHHHHHHT----------------------------------------CCEEE T ss_pred HHHHCCCCEEEECCCCCCCHHH--HHHHHHHHCCC----------------------------------------CCEEE T ss_conf 3210223035422556642578--89987643179----------------------------------------97799 Q ss_pred ECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 7121000158876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 184 IGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 184 Vg~KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) |++|.|.+ ++.--..+..+....-...+++|-... ..+..+++.+. T Consensus 115 v~NK~D~~-------~~~~~~~~~~~~~~~~~~~~~vSA~~g--~gi~~L~~~i~ 160 (171) T d1mkya1 115 VANKAENL-------REFEREVKPELYSLGFGEPIPVSAEHN--INLDTMLETII 160 (171) T ss_dssp EEESCCSH-------HHHHHHTHHHHGGGSSCSCEECBTTTT--BSHHHHHHHHH T ss_pred EEECCCCC-------CHHHHHHHHHHHHCCCCCEEEEECCCC--CCHHHHHHHHH T ss_conf 98724443-------224789999999568997799851468--88899999999 No 36 >d1rfla_ c.37.1.8 (A:) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli} Probab=98.02 E-value=2.5e-07 Score=62.12 Aligned_columns=114 Identities=15% Q ss_pred EEEEECCCCCHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEE- Q ss_conf 8998659886377777552766---788875310002211101578711178889715785420211000042351206- Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDRD---EPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTF- 109 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r~---e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~- 109 (351) |.++|..|+|||||+++++++. ..++|++..++.++--.-.+. -..+|..+|.......+..-+....+... T Consensus 10 I~ivG~~~~GKStLin~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~----~~~i~DtpG~~~~~~~~~~~~~~~~~~~i~ 85 (172) T d1rfla_ 10 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGM----PLHIIDTAGLREASDEVERIGIERAWQEIE 85 (172) T ss_dssp EEECSSSSSSSHHHHHHHSSCSSCCCCCCSSCCTTCCCSCCCCSSC----SSCCCCCCCSHHHHHHHHHHTSCCSCCCCC T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCC----HHHHHCCCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 9998249997899999985675303212355321112565202200----232203566310220123211000123332 Q ss_pred ---EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECC Q ss_conf ---77888736984689999999999999999999999852695378999999998414667760011106887799712 Q Ver_Hs_NP_0570 110 ---SLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGS 186 (351) Q Consensus 110 ---~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~ 186 (351) .+++|+|.|.+... ...+.|.... .-.+...|+++|++ T Consensus 86 ~~d~ii~viD~~~~~~~-~~~~~~~~~~--------------------------------------~~~~~~~piiiv~N 126 (172) T d1rfla_ 86 QADRVLFMVDGTTTDAV-DPAEIWPEFI--------------------------------------ARLPAKLPITVVRN 126 (172) T ss_dssp CEEEEECCCCTTCCCST-THHHHHHHHS--------------------------------------SSSCCCCEECCCSC T ss_pred HCCCEEEEEECCCCCCH-HHHHHHHHHH--------------------------------------HHHHCCCCEEEEEC T ss_conf 03724899867888874-4689999999--------------------------------------87306972899604 Q ss_pred EECC Q ss_conf 1000 Q Ver_Hs_NP_0570 187 KYDV 190 (351) Q Consensus 187 KYD~ 190 (351) |.|. T Consensus 127 K~Dl 130 (172) T d1rfla_ 127 KADI 130 (172) T ss_dssp HHHH T ss_pred CCCC T ss_conf 2265 No 37 >d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis} Probab=97.91 E-value=3.9e-05 Score=48.54 Aligned_columns=156 Identities=17% Q ss_pred EEEEEECCCCCHHHHHHHHCCCCC--CCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECC--------CCCHHHCEEEEEC Q ss_conf 589986598863777775527667--888753100022111015787111788897157--------8542021100004 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCLDRDE--PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG--------GTSLLDLISIPIT 102 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl~r~e--~~KPTlALeYtygRra~~~~~~KdvaH~WELGg--------g~~ls~Li~ipit 102 (351) .|.++|..|+||||||++++.+.. ...++.+-.|+......++.. ..-.|-..| ...+..++...+. T Consensus 25 ~I~iiG~~n~GKSSLin~L~~~~~~~~~~~~~~~t~~~~~~~~~~~~---~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 101 (195) T d1svia_ 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDEL---HFVDVPGYGFAKVSKSEREAWGRMIETYIT 101 (195) T ss_dssp EEEEEEBTTSSHHHHHHHHHTC-------------CCEEEEEETTTE---EEEECCCBCCCSSCHHHHHHHHHHHHHHHH T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCE---EEEEECCCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 89998359997899999985786257631567511334676205650---799807754334650357789998876544 Q ss_pred CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE Q ss_conf 23512067788873698468999999999999999999999985269537899999999841466776001110688779 Q Ver_Hs_NP_0570 103 GDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLV 182 (351) Q Consensus 103 ~~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlv 182 (351) .-...+.++.++--.........-+..+++. ..+|++ T Consensus 102 ~~~~~d~v~~v~d~~~~~~~~~~~~~~~~~~-------------------------------------------~~~p~i 138 (195) T d1svia_ 102 TREELKAVVQIVDLRHAPSNDDVQMYEFLKY-------------------------------------------YGIPVI 138 (195) T ss_dssp HCTTEEEEEEEEETTSCCCHHHHHHHHHHHH-------------------------------------------TTCCEE T ss_pred HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC-------------------------------------------CCCHHE T ss_conf 5544222111012345762567887642000-------------------------------------------110001 Q ss_pred EECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE-----CHHHHHHHHHHHHHH Q ss_conf 971210001588766789999999999986094688851-----203456789998887 Q Ver_Hs_NP_0570 183 IIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-----KSEALLLKIRGVINQ 236 (351) Q Consensus 183 IVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtS-----k~e~l~~r~r~~inh 236 (351) +|++|.|.+.. .+..+.+.....+++...+..++++| --+.++.-+..++++ T Consensus 139 vv~NK~Dl~~~--~~~~~~~~~i~~~l~~~~~~~i~~vSA~tg~Gi~el~~~i~~~i~~ 195 (195) T d1svia_ 139 VIATKADKIPK--GKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMINR 195 (195) T ss_dssp EEEECGGGSCG--GGHHHHHHHHHHHHTCCTTSEEEECCTTTCTTHHHHHHHHHHHHTC T ss_pred EEEECCCCCCH--HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCC T ss_conf 32200146787--5788999999999730589968998546687889999999998439 No 38 >d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis} Probab=97.90 E-value=7.9e-05 Score=46.63 Aligned_columns=152 Identities=17% Q ss_pred EEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCC---------CCCEEEEEEEECCCCCHHHCEEEEECC Q ss_conf 58998659886377777552766788875310002211101578---------711178889715785420211000042 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHN---------TPKDIAHFWELGGGTSLLDLISIPITG 103 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~~---------~~KdvaH~WELGgg~~ls~Li~ipit~ 103 (351) +|-++|..|+|||||+++.+... .+...+|...-+..+.. ...-..++|-..|-..+.....-.+.. T Consensus 7 ~I~iiG~~naGKSTLin~L~~~~----~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~i~iiDtpG~~~~~~~~~~~~~~ 82 (179) T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTEIA----STSAHDKLPESQKRGITIDIGFSAFKLENYRITLVDAPGHADLIRAVVSAADI 82 (179) T ss_dssp EEEEEECTTSSHHHHHHHHHTTC------------------------CCCEEEETTEEEEECCCSSHHHHHHHHHHHTTS T ss_pred EEEEEECCCCCHHHHHHHHHHHH----CCCCCCCCCCCCCCCEEEEEEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHC T ss_conf 68998418988889999997631----01012553120000246641123311112128997176630245666666431 Q ss_pred CCCCEEEEEEEEECCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE Q ss_conf 3512067788873698-468999999999999999999999985269537899999999841466776001110688779 Q Ver_Hs_NP_0570 104 DTLRTFSLVLVLDLSK-PNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLV 182 (351) Q Consensus 104 ~~l~~~~viivlDlSk-P~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlv 182 (351) -. .+++|+|.+. .......+-.++.. .++|++ T Consensus 83 ~D----~vi~vid~~~~~~~~~~e~~~~~~~-------------------------------------------~~~p~i 115 (179) T d1wb1a4 83 ID----LALIVVDAKEGPKTQTGEHMLILDH-------------------------------------------FNIPII 115 (179) T ss_dssp CC----EEEEEEETTTCSCHHHHHHHHHHHH-------------------------------------------TTCCBC T ss_pred CE----EEEEEEECCCCCCCCHHHHHHHHHH-------------------------------------------CCCCEE T ss_conf 50----5788740545534103899999985-------------------------------------------057148 Q ss_pred EECCEECCCCCCCHHHHHHHHHHHHHHHHHC----CCEEEEEECHHHHHHH-HHHHHHHHH Q ss_conf 9712100015887667899999999999860----9468885120345678-999888750 Q Ver_Hs_NP_0570 183 IIGSKYDVFQDFESEKRKVICKTLRFVAHYY----GASLMFTSKSEALLLK-IRGVINQLA 238 (351) Q Consensus 183 IVg~KYD~F~~~D~e~rK~i~r~LR~iAH~y----GA~L~FtSk~e~l~~r-~r~~inhl~ 238 (351) ||++|.|.. +++..+..-+-++.+.... +...+++|-...-... .++.|.+.+ T Consensus 116 iviNK~Dl~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SA~~g~gi~eL~~~i~~~l 173 (179) T d1wb1a4 116 VVITKSDNA---GTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIITTL 173 (179) T ss_dssp EEEECTTSS---CHHHHHHHHHHHHHHHHHSSSGGGCCEEECCTTTCTTHHHHHHHHHHHH T ss_pred EEECCCCCC---CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHC T ss_conf 872151246---8778899999999988653178984378840567999899999999755 No 39 >d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima} Probab=97.84 E-value=3.1e-05 Score=49.12 Aligned_columns=147 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCC---- Q ss_conf 8998659886377777552766---788875310002211101578711178889715785420211000042351---- Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDRD---EPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTL---- 106 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r~---e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l---- 106 (351) |.++|..|+|||||++++++++ ..+.|+...+...+--...+. -..+|...+....+.-..-.....+. T Consensus 3 I~liG~~~~GKSTLin~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (160) T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGI----LFRIVDTAGVRSETNDLVERLGIERTLQEI 78 (160) T ss_dssp EEEECCHHHHTCHHHHHHHHHTBCCCCCSSCCSSCSCCEEEEETTE----EEEEEESSCCCSSCCTTCCCCCHHHHHHHH T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCE----EEEEEEEECCCCCCCCHHHHHHHHHHHHHH T ss_conf 8898339998889999984674214301111010000100111530----257763101111343012233367899998 Q ss_pred -CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEC Q ss_conf -2067788873698468999999999999999999999985269537899999999841466776001110688779971 Q Ver_Hs_NP_0570 107 -RTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIG 185 (351) Q Consensus 107 -~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg 185 (351) ..-.+++|+|.++|...++ ..++... ...|++||+ T Consensus 79 ~~~d~ii~vvD~~~~~~~~~--~~~~~~l------------------------------------------~~~~~iiv~ 114 (160) T d1xzpa2 79 EKADIVLFVLDASSPLDEED--RKILERI------------------------------------------KNKRYLVVI 114 (160) T ss_dssp HHCSEEEEEEETTSCCCHHH--HHHHHHH------------------------------------------TTSSEEEEE T ss_pred HHCCEEEEEECCCCCCCHHH--HHHHHHH------------------------------------------CCCCEEEEE T ss_conf 63541478641521114567--8888641------------------------------------------367558997 Q ss_pred CEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHH Q ss_conf 21000158876678999999999998609468885120345678999888750 Q Ver_Hs_NP_0570 186 SKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLA 238 (351) Q Consensus 186 ~KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~r~~inhl~ 238 (351) +|.|.....+.+..+. ....+...+.+|-... ..+-.+.+.+. T Consensus 115 NK~Dl~~~~~~~~~~~--------~~~~~~~i~~iSa~~g--~gi~eL~~~i~ 157 (160) T d1xzpa2 115 NKVDVVEKINEEEIKN--------KLGTDRHMVKISALKG--EGLEKLEESIY 157 (160) T ss_dssp EECSSCCCCCHHHHHH--------HHTCSTTEEEEEGGGT--CCHHHHHHHHH T ss_pred ECCCCCCCCCHHHHHH--------HHCCCCCEEEEECCCC--CCHHHHHHHHH T ss_conf 2566678346789999--------7178997799852568--78789999984 No 40 >d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis} Probab=97.70 E-value=2.1e-06 Score=56.44 Aligned_columns=126 Identities=17% Q ss_pred CEEEEEECCCCCHHHHHHHHC--CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEE Q ss_conf 458998659886377777552--766788875310002211101578711178889715785420211000042351206 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTIILRCL--DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTF 109 (351) Q Consensus 32 k~v~~vGsk~~GKTTli~Rfl--~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~ 109 (351) ..|-++|..|+|||||++|+. .-....+|+...+...............+.+.|-.++...................- T Consensus 2 a~I~iiG~~nvGKSsLin~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (185) T d1lnza2 2 ADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTR 81 (185) T ss_dssp CCEEEESSTTSSHHHHHHHSEEECCEESSTTSSCCCCCEEEEECSSSCEEEEEEHHHHHHHTTCTTTTHHHHHHHHHHCC T ss_pred CEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEEEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH T ss_conf 71688746998689999998568521320466402578878875167111001234432100123568899988641223 Q ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEC Q ss_conf 77888736984689999999999999999999999852695378999999998414667760011106887799712100 Q Ver_Hs_NP_0570 110 SLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYD 189 (351) Q Consensus 110 ~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD 189 (351) .+++|+|.+.+ ..+...+.|.......... ......+|.+++++|.| T Consensus 82 ~i~~v~d~~~~-~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~i~v~nK~D 128 (185) T d1lnza2 82 VIVHVIDMSGL-EGRDPYDDYLTINQELSEY--------------------------------NLRLTERPQIIVANKMD 128 (185) T ss_dssp EEEEEEESSCS-SCCCHHHHHHHHHHHHHHS--------------------------------CSSTTTSCBCBEEECTT T ss_pred HHHHHHHHCCC-CCCCCHHHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHHHHHC T ss_conf 56555320002-4666178999998777777--------------------------------66542111234431110 Q ss_pred C Q ss_conf 0 Q Ver_Hs_NP_0570 190 V 190 (351) Q Consensus 190 ~ 190 (351) . T Consensus 129 l 129 (185) T d1lnza2 129 M 129 (185) T ss_dssp S T ss_pred C T ss_conf 1 No 41 >d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli} Probab=97.23 E-value=0.00055 Score=41.40 Aligned_columns=161 Identities=14% Q ss_pred EEEEEECCCCCHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCC---- Q ss_conf 5899865988637777755276--6788875310002211101578711178889715785420211000042351---- Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCLDR--DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTL---- 106 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl~r--~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l---- 106 (351) .|.++|..|+||||||++++++ .....++.+....+.--...+........-|-..+.....+..--.+....+ T Consensus 18 ~I~iiG~~~vGKSSLin~L~~~~~~~~~~~~~~tt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (188) T d1puia_ 18 EVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQ 97 (188) T ss_dssp EEEEEECTTSSHHHHHTTTCCC-------------CCEEEEEEETTEEEEECCCCC------CCHHHHHHHHHHHHHHCT T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 78997369987889999985787324305656401223455420232777640100125763567787766678998764 Q ss_pred CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECC Q ss_conf 20677888736984689999999999999999999999852695378999999998414667760011106887799712 Q Ver_Hs_NP_0570 107 RTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGS 186 (351) Q Consensus 107 ~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~ 186 (351) ....+++|+|.+.. +.+.-...++..+.. .+|+++|++ T Consensus 98 ~~~~v~~v~~~~~~--~~~~~~~~~~~~~~~----------------------------------------~~p~iiv~n 135 (188) T d1puia_ 98 SLQGLVVLMDIRHP--LKDLDQQMIEWAVDS----------------------------------------NIAVLVLLT 135 (188) T ss_dssp TEEEEEEEEETTSC--CCHHHHHHHHHHHHT----------------------------------------TCCEEEEEE T ss_pred HHHHHHHHHCCHHC--CHHHHHHHHHHHHHH----------------------------------------HHHHHHHHH T ss_conf 32333210001001--117899999999873----------------------------------------224543320 Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE--EECHHHHHHHHHHHHHHH Q ss_conf 100015887667899999999999860946888--512034567899988875 Q Ver_Hs_NP_0570 187 KYDVFQDFESEKRKVICKTLRFVAHYYGASLMF--TSKSEALLLKIRGVINQL 237 (351) Q Consensus 187 KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~F--tSk~e~l~~r~r~~inhl 237 (351) |.|.... .+.++.+-.-...+++..+-.=+| ++++-.=+...+..|... T Consensus 136 K~D~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~SA~~g~gI~eL~~~l~~~ 186 (188) T d1puia_ 136 KADKLAS--GARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTW 186 (188) T ss_dssp CGGGSCH--HHHHHHHHHHHHHHGGGCSCEEEEECBTTTTBSHHHHHHHHHHH T ss_pred HCCCCCH--HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH T ss_conf 1156887--78999999999999850699837997435688888999999875 No 42 >d1exma3 c.37.1.8 (A:3-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus} Probab=97.14 E-value=0.0029 Score=36.94 Aligned_columns=142 Identities=22% Q ss_pred EEEEEECCCCCHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCC Q ss_conf 58998659886377777552------766788875310002211101578711178889715785420211000042351 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCL------DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTL 106 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl------~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l 106 (351) +|-++|.-++|||||+++.+ .+....+..-.+|+...-+.+|-.. -+...+.-.....-.+|+.|=-.+-+ T Consensus 11 nI~iiGhvd~GKSTL~~~Ll~~~~~~~~~~~~~~~~~~D~~~~E~~rgiTi---~~~~~~~~~~~~~i~~iDtPGh~~f~ 87 (210) T d1exma3 11 NVGTIGHVDHGKTTLTAALTFVTAAENPNVEVKDYGDIDKAPEERARGITI---NTAHVEYETAKRHYSHVDCPGHADYI 87 (210) T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHHCTTCCCCCHHHHSCSHHHHHHTSCC---SCEEEEEECSSCEEEEEECCCSGGGH T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHCCCEE---EEEEEEEEECCCEEEEECCCCHHHHH T ss_conf 899984238887899999988752100110112211024550121135034---23689984115148873277468899 Q ss_pred --------CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC Q ss_conf --------206778887369846899999999999999999999998526953789999999984146677600111068 Q Ver_Hs_NP_0570 107 --------RTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFP 178 (351) Q Consensus 107 --------~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~p 178 (351) ..=.+++|+|.... ...+++.+.. .+.-.+ T Consensus 88 ~~~~~~~~~aD~aiLVVda~~G---------~~~qt~~~l~---------------------------------~~~~~g 125 (210) T d1exma3 88 KNMITGAAQMDGAILVVSAADG---------PMPQTREHIL---------------------------------LARQVG 125 (210) T ss_dssp HHHHHHHTTCSSEEEEEETTTC---------SCHHHHHHHH---------------------------------HHHHTT T ss_pred HHHHHHHHHHCEEEEEECCCCC---------CCHHHHHHHH---------------------------------HHHHCC T ss_conf 9999987763344334214332---------2024689999---------------------------------999728 Q ss_pred CC-EEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCC-----CEEEEEE Q ss_conf 87-7997121000158876678999999999998609-----4688851 Q Ver_Hs_NP_0570 179 VP-LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYG-----ASLMFTS 221 (351) Q Consensus 179 iP-lvIVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yG-----A~L~FtS 221 (351) +| ++++-+|.|... |++..+.+..-+|-+-+.+| +..+..| T Consensus 126 ~~~iiv~iNKiDlv~--~~~~~~~i~~ev~~~l~~~~~~~~~ipii~iS 172 (210) T d1exma3 126 VPYIVVFMNKVDMVD--DPELLDLVEMEVRDLLNQYEFPGDEVPVIRGS 172 (210) T ss_dssp CCCEEEEEECGGGCC--CHHHHHHHHHHHHHHHHHTTSCTTTSCEEECC T ss_pred CCCEEEEEECCCCCC--CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC T ss_conf 971689961358888--58999999999998653138885322168600 No 43 >d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi} Probab=96.91 E-value=0.0096 Score=33.70 Aligned_columns=159 Identities=19% Q ss_pred EEEEEECCCCCHHHHHHHHCCC-----------------------CCCCCCCCCCCHHHHHHHCCCCCCCEEE-EEEEEC Q ss_conf 5899865988637777755276-----------------------6788875310002211101578711178-889715 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCLDR-----------------------DEPPKPTLALEYTYGRRAKGHNTPKDIA-HFWELG 88 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl~r-----------------------~e~~KPTlALeYtygRra~~~~~~Kdva-H~WELG 88 (351) +|-+||..|+|||||+++.+.. .+........--+......++....+.- .||... T Consensus 7 ~VaiiG~~naGKSTLln~L~g~~~~~~~~~~~~g~T~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~i~Dtp 86 (195) T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAP 86 (195) T ss_dssp EEEEECSTTSSHHHHHHHHHTCCCC--CGGGGSCSSSCCEEEEEEEEECTTTCCEESSSBCTTTCCBCEEEEEEEEEECS T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHEEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECC T ss_conf 89998406987788999999877666654431562222010111000354201122100011100120365079997175 Q ss_pred CCCCHHHCEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC Q ss_conf 78542021100004235120677888736984689999999999999999999999852695378999999998414667 Q Ver_Hs_NP_0570 89 GGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDH 168 (351) Q Consensus 89 gg~~ls~Li~ipit~~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dh 168 (351) | +.+.+....+.....++ +++|+|.+.......+...+........ T Consensus 87 G---~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~------------------------------ 132 (195) T d1kk1a3 87 G---HEALMTTMLAGASLMDG-AILVIAANEPCPRPQTREHLMALQIIGQ------------------------------ 132 (195) T ss_dssp S---HHHHHHHHHHCGGGCSE-EEEEEETTSCSSCHHHHHHHHHHHHHTC------------------------------ T ss_pred C---HHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCHHHHHHHHHHHHHCC------------------------------ T ss_conf 5---58999999998877544-4433220012111026789999997408------------------------------ Q ss_pred CCCCCCCCCCCCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCC---CEEEEEECHHHHHHH-HHHHHHHHH Q ss_conf 7600111068877997121000158876678999999999998609---468885120345678-999888750 Q Ver_Hs_NP_0570 169 PDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYG---ASLMFTSKSEALLLK-IRGVINQLA 238 (351) Q Consensus 169 pD~~~v~p~piPlvIVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yG---A~L~FtSk~e~l~~r-~r~~inhl~ 238 (351) .|++++-+|.| ..|.+.....-.-++-..+.++ +-+++.|-....... ..+.|..++ T Consensus 133 ----------~~i~~~vNK~D---~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vSA~~G~gid~L~~~I~~~i 193 (195) T d1kk1a3 133 ----------KNIIIAQNKIE---LVDKEKALENYRQIKEFIEGTVAENAPIIPISALHGANIDVLVKAIEDFI 193 (195) T ss_dssp ----------CCEEEEEECGG---GSCHHHHHHHHHHHHHHHTTSTTTTCCEEECBTTTTBSHHHHHHHHHHHS T ss_pred ----------CEEEEEEECCC---CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHC T ss_conf ----------80566551135---54556899999999998743178870389830667899899999999746 No 44 >d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus} Probab=96.90 E-value=0.0018 Score=38.25 Aligned_columns=146 Identities=25% Q ss_pred EEEEEECCCCCHHHHHHHHC-CCCCCCCCCCC-------------------CCHHHHHHHCCCCCCCEEEEE------EE Q ss_conf 58998659886377777552-76678887531-------------------000221110157871117888------97 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCL-DRDEPPKPTLA-------------------LEYTYGRRAKGHNTPKDIAHF------WE 86 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl-~r~e~~KPTlA-------------------LeYtygRra~~~~~~KdvaH~------WE 86 (351) +|-++|.-++|||||+.+.+ +.....+.+.. +|+...-|.+|....-..++| +. T Consensus 5 nv~iiGhvd~GKSTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~er~rgiti~~~~~~~~~~~~~i~ 84 (224) T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERERGVTINLTFMRFETKKYFFT 84 (224) T ss_dssp EEEEEESTTSSHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHC-----------CEEECSSCEEE T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCEEE T ss_conf 89998414888789999999871672068899999887553100123114545764311256632102456604685787 Q ss_pred ECCCCCHHHCEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC Q ss_conf 15785420211000042351206778887369846899999999999999999999998526953789999999984146 Q Ver_Hs_NP_0570 87 LGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPK 166 (351) Q Consensus 87 LGgg~~ls~Li~ipit~~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~ 166 (351) +=----+.+++...+++-..-+.++++|=--.-+..-+..++- +++.|+. T Consensus 85 ~iD~PGH~~f~~~~~~g~~~~D~ailVVda~~G~~~~~~~v~~---qt~eh~~--------------------------- 134 (224) T d1jnya3 85 IIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEG---QTREHII--------------------------- 134 (224) T ss_dssp ECCCSSSTTHHHHHHHTSSCCSEEEEEEECSTTHHHHHHSTTC---HHHHHHH--------------------------- T ss_pred EECCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHH---HHHHHHH--------------------------- T ss_conf 4237651134788998765533146687555677522013446---8999999--------------------------- Q ss_pred CCCCCCCCCCCCCC-EEEECCEECCCC-CCCHHHHHHHHHHHHHHHHHCC Q ss_conf 67760011106887-799712100015-8876678999999999998609 Q Ver_Hs_NP_0570 167 DHPDHELIDPFPVP-LVIIGSKYDVFQ-DFESEKRKVICKTLRFVAHYYG 214 (351) Q Consensus 167 dhpD~~~v~p~piP-lvIVg~KYD~F~-~~D~e~rK~i~r~LR~iAH~yG 214 (351) .+.-+++| ++++-+|.|.++ +++.+..+.|+.-++.+...+| T Consensus 135 ------~~~~~g~~~iIV~iNKiD~~~~~~~~~~~~~i~~~i~~~l~~~g 178 (224) T d1jnya3 135 ------LAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSYG 178 (224) T ss_dssp ------HHHHTTCTTCEEEEECGGGSSSTTCHHHHHHHHHHHHHHHHHTT T ss_pred ------HHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHC T ss_conf ------99980798089998368888855136899999999999999718 No 45 >d1etu_1 c.37.1.8 (5-200) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Escherichia coli} Probab=96.51 E-value=0.018 Score=32.05 Aligned_columns=142 Identities=21% Q ss_pred EEEEEECCCCCHHHHHHHHCC-----CCCCCCCCCCCCHHHHHHHCCCCC---------CCEEEEEEEECCCCCHHHCEE Q ss_conf 589986598863777775527-----667888753100022111015787---------111788897157854202110 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCLD-----RDEPPKPTLALEYTYGRRAKGHNT---------PKDIAHFWELGGGTSLLDLIS 98 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl~-----r~e~~KPTlALeYtygRra~~~~~---------~KdvaH~WELGgg~~ls~Li~ 98 (351) +|-++|.-++|||||+++.+. ..+...-+..++.....+..|-.. .....+|=-..| +..++. T Consensus 9 nI~iiGh~d~GKTTL~~~L~~~~~~~~~~~~~~~~~~d~~~~e~~~giT~~~~~~~~~~~~~~i~~iDTPG---H~~f~~ 85 (196) T d1etu_1 9 NVGTIGHVDHGKTTLTAAITTVLAKTYGGAAXXXXXXXXXXXXXXXGITINTSHVEYDTPTRHYAHVDCPG---HADYVK 85 (196) T ss_dssp EEEEECSSSSSHHHHHHHHHHHHHHHH-------------------CCCCCCEEEEEECSSCEEEEEECSS---HHHHHH T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCH---HHHHHH T ss_conf 89998212788789999999987665210111000000112223453367237899843883599972632---567899 Q ss_pred EEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC Q ss_conf 00042351206778887369846899999999999999999999998526953789999999984146677600111068 Q Ver_Hs_NP_0570 99 IPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFP 178 (351) Q Consensus 99 ipit~~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~p 178 (351) ..+++-+..+ .+++|+|.+. ...=.|.|.| .+...+..+. T Consensus 86 ~~~~~~~~aD-~aiLVIda~e-gi~~qt~e~l---------~~~~~~~~~~----------------------------- 125 (196) T d1etu_1 86 NMITGAAQMD-GAILVVAATD-GPMPQTREHI---------LLGRQVGVPY----------------------------- 125 (196) T ss_dssp HHHSSTTCCS-EEEEEECTTS-CSCHHHHHHH---------HHHHHHTCCE----------------------------- T ss_pred HHHHHHHHHH-HEEEEECCCC-CCCCHHHHHH---------HHHHHCCCCE----------------------------- T ss_conf 9999988860-1330211445-6662478999---------9999718961----------------------------- Q ss_pred CCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCC-----CEEEEEE Q ss_conf 877997121000158876678999999999998609-----4688851 Q Ver_Hs_NP_0570 179 VPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYG-----ASLMFTS 221 (351) Q Consensus 179 iPlvIVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yG-----A~L~FtS 221 (351) ++++-+|.|... +.+....+..-+|.+-..|| +-.++.| T Consensus 126 --iiVviNKiDli~--~~~~~~~~~~~~~~~l~~~~~~~~~~piv~iS 169 (196) T d1etu_1 126 --IIVFLNKCDMVD--DEELLELVEMEVRELLSQYDFPGDDTPIVRGS 169 (196) T ss_dssp --EEEEEECCSSCC--CHHHHHHHHHHHHHHHHHHSSCSSSSCEEEEC T ss_pred --EEEEECCCCCCC--CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC T ss_conf --899704568888--78999999999998764138998845589710 No 46 >d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum} Probab=96.33 E-value=0.0011 Score=39.54 Aligned_columns=133 Identities=16% Q ss_pred CE--EEEEECCCCCHHHHHHHHC-------CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEEC Q ss_conf 45--8998659886377777552-------76678887531000221110157871117888971578542021100004 Q Ver_Hs_NP_0570 32 KF--VFFIGSKNGGKTTIILRCL-------DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPIT 102 (351) Q Consensus 32 k~--v~~vGsk~~GKTTli~Rfl-------~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit 102 (351) |+ |-+||-.|+|||||+++.+ .+....+-...-++.+.++............+..-+++..+.+.---..- T Consensus 4 r~p~IaiiG~~n~GKSTL~n~L~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 83 (227) T d1g7sa4 4 RSPIVSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRETLPGLFFIDTPGHEAF 83 (227) T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHHHHSCC----CCCBTTEEEEEHHHHHHHSCGGGGGCGGGGTCCEEEEECCCTTSCC T ss_pred CCCEEEEEECCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCEEEEECCCHHHHHH T ss_conf 58478998216987789999987201000035541023332331331124156640046898516706862475168999 Q ss_pred CCCC-----CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 2351-----20677888736984689999999999999999999999852695378999999998414667760011106 Q Ver_Hs_NP_0570 103 GDTL-----RTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPF 177 (351) Q Consensus 103 ~~~l-----~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~ 177 (351) ..+. ..-.+++|+|..... ..+..+++..+...+ T Consensus 84 ~~~~~~~~~~~d~~l~vida~~g~-------------~~~~~~~~~~l~~~~---------------------------- 122 (227) T d1g7sa4 84 TTLRKRGGALADLAILIVDINEGF-------------KPQTQEALNILRMYR---------------------------- 122 (227) T ss_dssp TTSBCSSSBSCSEEEEEEETTTCC-------------CHHHHHHHHHHHHTT---------------------------- T ss_pred HHHHHHHHHHCCEEEEEEECCCHH-------------HHHHHHHHHHHHHCC---------------------------- T ss_conf 999999887556268997263101-------------367899999999628---------------------------- Q ss_pred CCCEEEECCEECCCCCCCHHHHHHHHHHH Q ss_conf 88779971210001588766789999999 Q Ver_Hs_NP_0570 178 PVPLVIIGSKYDVFQDFESEKRKVICKTL 206 (351) Q Consensus 178 piPlvIVg~KYD~F~~~D~e~rK~i~r~L 206 (351) +|.++|.+|.|......-...+-+...+ T Consensus 123 -~p~iiviNKiD~~~~~~~~~~~~~~~~l 150 (227) T d1g7sa4 123 -TPFVVAANKIDRIHGWRVHEGRPFMETF 150 (227) T ss_dssp -CCEEEEEECGGGSTTCCCCTTCCHHHHH T ss_pred -CCEEEEEECCCCCCCCHHHHHHHHHHHH T ss_conf -9389998644677864567889999973 No 47 >d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial} Probab=96.29 E-value=0.0044 Score=35.80 Aligned_columns=141 Identities=24% Q ss_pred EEEEEECCCCCHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHCC---------CCCCCEEEEEEEECCCCCHHHCEE Q ss_conf 58998659886377777552-----7667888753100022111015---------787111788897157854202110 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCL-----DRDEPPKPTLALEYTYGRRAKG---------HNTPKDIAHFWELGGGTSLLDLIS 98 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl-----~r~e~~KPTlALeYtygRra~~---------~~~~KdvaH~WELGgg~~ls~Li~ 98 (351) +|-++|.-++|||||+++.+ ......+-..-+|+.-..+.+| -...+...+|..-.| +..++. T Consensus 5 ni~iiGhvd~GKSTL~~~L~~~~~~~~~~~~~~~~~~D~~~~E~~rgiTi~~~~~~~~~~~~~~~~iDtPG---h~~f~~ 81 (196) T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARHYAHTDCPG---HADYVK 81 (196) T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTSBCCCCHHHHHSCCEEEETTEEEECEEEEEECSSCEEEEEECSS---HHHHHH T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEECCCEEEEEECCCCEEEEECCCH---HHHHHH T ss_conf 88998631688678999999998752002445565406764201054000204789712553246523300---346788 Q ss_pred EEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC Q ss_conf 00042351206778887369846899999999999999999999998526953789999999984146677600111068 Q Ver_Hs_NP_0570 99 IPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFP 178 (351) Q Consensus 99 ipit~~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~p 178 (351) -.+++-..-+.++++| +..+-+..++..+.. .+.-++ T Consensus 82 ~~~~~~~~aD~aiLVV----------da~~g~~~qt~e~~~---------------------------------~~~~~g 118 (196) T d1d2ea3 82 NMITGTAPLDGCILVV----------AANDGPMPQTREHLL---------------------------------LARQIG 118 (196) T ss_dssp HHHHTSSCCSEEEEEE----------ETTTCSCHHHHHHHH---------------------------------HHHHTT T ss_pred HHHHHHHHHCCEEEEE----------ECCCCCCHHHHHHHH---------------------------------HHHHCC T ss_conf 9999876521046887----------335631034799999---------------------------------999648 Q ss_pred CC-EEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCE-----EEEEE Q ss_conf 87-799712100015887667899999999999860946-----88851 Q Ver_Hs_NP_0570 179 VP-LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGAS-----LMFTS 221 (351) Q Consensus 179 iP-lvIVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~-----L~FtS 221 (351) +| ++++-+|.|.+. |.+..+.+..-++.+-...|.. .++.| T Consensus 119 ~~~iiv~iNKiDlv~--d~~~~~~~~~~~~~~l~~~~~~~~~~piipiS 165 (196) T d1d2ea3 119 VEHVVVYVNKADAVQ--DSEMVELVELEIRELLTEFGYKGEETPIIVGS 165 (196) T ss_dssp CCCEEEEEECGGGCS--CHHHHHHHHHHHHHHHHHTTSCTTTSCEEECC T ss_pred CCEEEEEECCCCCCC--CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHH T ss_conf 934898604578888--78898876446677776427886432058710 No 48 >d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus)} Probab=95.86 E-value=0.023 Score=31.34 Aligned_columns=131 Identities=24% Q ss_pred EEEEEECCCCCHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEE Q ss_conf 5899865988637777755276---6788875310002211101578711178889715785420211000042351206 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCLDR---DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTF 109 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl~r---~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~ 109 (351) +|-++|..|+|||||||.+++. ++..-||-.-+.|-.+..--+..-+ -+.+|-+.|--....-.+--+........ T Consensus 58 ~IAIiG~snaGKSSLINAL~G~~~~e~~~a~tgv~~tT~~~~~y~~~~~~-~v~LvDTPGig~~~~~~~~yL~~~~~~~~ 136 (400) T d1tq4a_ 58 NVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIP-NVVFWDLPGIGSTNFPPDTYLEKMKFYEY 136 (400) T ss_dssp EEEEEECTTSSHHHHHHHHHTCCTTSTTSCCCCC----CCCEEEECSSCT-TEEEEECCCGGGSSCCHHHHHHHTTGGGC T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCC-EEEEEECCCCCCCCCCHHHHHHHHHHCCC T ss_conf 89987248985999999884688555666668898875544134446886-06898738898635448999999975487 Q ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCEEC Q ss_conf 77888736984689999999999999999999999852695378999999998414667760011106887799712100 Q Ver_Hs_NP_0570 110 SLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYD 189 (351) Q Consensus 110 ~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~KYD 189 (351) .++|++--..+..-=..+-. .+.-.+.|++||-+|+| T Consensus 137 Dl~Iivss~~~te~D~~la~-------------------------------------------~I~~~gK~fiiV~nKiD 173 (400) T d1tq4a_ 137 DFFIIISATRFKKNDIDIAK-------------------------------------------AISMMKKEFYFVRTKVD 173 (400) T ss_dssp SEEEEEESSCCCHHHHHHHH-------------------------------------------HHHHTTCEEEEEECCHH T ss_pred CEEEEECCCCCCHHHHHHHH-------------------------------------------HHHHCCCCEEEEEECCC T ss_conf 27998738887577899999-------------------------------------------99973898999973455 Q ss_pred CC---------CCCC-----HHHHHHHHHHHH Q ss_conf 01---------5887-----667899999999 Q Ver_Hs_NP_0570 190 VF---------QDFE-----SEKRKVICKTLR 207 (351) Q Consensus 190 ~F---------~~~D-----~e~rK~i~r~LR 207 (351) .- +.|+ .+.|....+.|+ T Consensus 174 ~dl~~e~~~k~~~f~~ek~Lq~Ir~~~~~~l~ 205 (400) T d1tq4a_ 174 SDITNEADGEPQTFDKEKVLQDIRLNCVNTFR 205 (400) T ss_dssp HHHHHHHTTCCTTCCHHHHHHHHHHHHHHHHH T ss_pred CCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 33488444155557776899999999999998 No 49 >d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=95.78 E-value=0.013 Score=32.81 Aligned_columns=143 Identities=19% Q ss_pred EEEEEECCCCCHHHHHHHHC--------------------CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCC Q ss_conf 58998659886377777552--------------------7667888753100022111015787111788897157854 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCL--------------------DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTS 92 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl--------------------~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ 92 (351) +|-++|.=.+|||||+.+.+ -.....+-...|||.-..|.+|... -.++..+-.... T Consensus 8 Ni~viGHVDhGKTTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~Er~rgiti---~~~~~~~~~~~~ 84 (239) T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITI---DIALWKFETPKY 84 (239) T ss_dssp EEEEEECTTSCHHHHHHHHHHHHSCSSHHHHHHHHHHGGGGSSSCCCHHHHHHHHHHHHHTTCCC---SCSCEEEECSSE T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCEE---ECCEEEECCCCC T ss_conf 89999631688689999999983774446888887666542002232024316875300137312---101024304583 Q ss_pred HHHCEEEEECCCCCCEEE--------EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC Q ss_conf 202110000423512067--------788873698468999999999999999999999985269537899999999841 Q Ver_Hs_NP_0570 93 LLDLISIPITGDTLRTFS--------LVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNM 164 (351) Q Consensus 93 ls~Li~ipit~~~l~~~~--------viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~ 164 (351) .--+|+.|=-.+=++.+. ++||+|..+ ..++.-..-..+++.|.. T Consensus 85 ~i~iIDtPGH~df~~~mi~g~~~~D~aiLVVda~~--g~~~~~~~~~~Qt~eh~~------------------------- 137 (239) T d1f60a3 85 QVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGV--GEFEAGISKDGQTREHAL------------------------- 137 (239) T ss_dssp EEEEEECCCCTTHHHHHHHSSSCCSEEEEEEECSH--HHHHHHTCTTSHHHHHHH------------------------- T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCEEEEEEECCC--CCCCCCHHHHHHHHHHHH------------------------- T ss_conf 68998578763036788876534026789972566--442322014389999999------------------------- Q ss_pred CCCCCCCCCCCCCCCC-EEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCC Q ss_conf 4667760011106887-7997121000158876678999999999998609 Q Ver_Hs_NP_0570 165 PKDHPDHELIDPFPVP-LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYG 214 (351) Q Consensus 165 ~~dhpD~~~v~p~piP-lvIVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yG 214 (351) .+..++++ ++|+-+|.|.+.. |.+....+++-+..+-+..| T Consensus 138 --------~~~~lgv~~iiv~iNKmD~v~~-~~~r~~~i~~ei~~~l~~~g 179 (239) T d1f60a3 138 --------LAFTLGVRQLIVAVNKMDSVKW-DESRFQEIVKETSNFIKKVG 179 (239) T ss_dssp --------HHHHTTCCEEEEEEECGGGGTT-CHHHHHHHHHHHHHHHHHHT T ss_pred --------HHHHCCCCEEEEEEECCCCCCC-CHHHHHHHHHHHHHHHHHCC T ss_conf --------9997189838999823688777-88899999999988887518 No 50 >d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum)} Probab=95.30 E-value=0.037 Score=30.09 Aligned_columns=122 Identities=14% Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHCCCCC Q ss_conf 987418899998765225766611011125745899865988637777755276---67888753100022111015787 Q Ver_Hs_NP_0570 1 MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDR---DEPPKPTLALEYTYGRRAKGHNT 77 (351) Q Consensus 1 ~~~~~lw~~~~~ev~~~~~~~~~~~~~~~~ek~v~~vGsk~~GKTTli~Rfl~r---~e~~KPTlALeYtygRra~~~~~ 77 (351) +|..+.=.+....-+-|+.+.++-+ |+++|..|+||||++|.++++ .-...|.+-.+-..+....... T Consensus 10 ~~~~~~~~l~~~l~~~k~~~~~~l~--------I~liG~~g~GKSSliN~ilg~~~~~~s~~~~~T~~~~~~~~~~~g~- 80 (257) T d1h65a_ 10 FAPATQTKLLELLGNLKQEDVNSLT--------ILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGF- 80 (257) T ss_dssp SCHHHHHHHHHHHHHHHHTTCCEEE--------EEEEESTTSSHHHHHHHHHTSCCSCCCSSSCCCSSCEEEEEEETTE- T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCE--------EEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEECCCE- T ss_conf 3368999999999864320337767--------9997068984899988874674203337888510038899731875- Q ss_pred CCEEEEEEEECC-------CCCHHHCEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHH Q ss_conf 111788897157-------854202110000423512067788873698468999999999999 Q Ver_Hs_NP_0570 78 PKDIAHFWELGG-------GTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQAT 134 (351) Q Consensus 78 ~KdvaH~WELGg-------g~~ls~Li~ipit~~~l~~~~viivlDlSkP~~lw~tle~~l~~v 134 (351) -+.||---| .....+.+.-.+.....+.+.+++-+|......-=..+-.++..+ T Consensus 81 ---~i~vIDTPG~~~~~~~~~~~~~~i~~~l~~~~~d~iLlVi~~~~~r~~~~d~~~~~~i~~~ 141 (257) T d1h65a_ 81 ---TLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDS 141 (257) T ss_dssp ---EEEEEECCCSEETTEECHHHHHHHHHHTTTCEECEEEEEEESSCCCCCHHHHHHHHHHHHH T ss_pred ---EEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH T ss_conf ---8999866887772134089999999986179992899998479862388999999999984 No 51 >d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis} Probab=94.96 E-value=0.16 Score=26.14 Aligned_columns=162 Identities=21% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCC---------CCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEE Q ss_conf 7458998659886377777552766788---------8753100022111015787111788897157854202110000 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPP---------KPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPI 101 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~---------KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipi 101 (351) +..+-++|-.|||||||+ +++..--.| ++-...++.+..+..+.. |+.+-+-..........+-.. T Consensus 29 Gei~~iiG~nGaGKSTLl-~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~----i~~v~q~~~l~~~ltv~enl~ 103 (240) T d1g2912 29 GEFMILLGPSGCGKTTTL-RMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRD----IAMVFQSYALYPHMTVYDNIA 103 (240) T ss_dssp TCEEEEECSTTSSHHHHH-HHHHTSSCCSEEEEEETTEEEEEGGGTEECCGGGSS----EEEECSCCCCCTTSCHHHHHH T ss_pred CCEEEEECCCCCCHHHHH-HHHHHCCCCCCCCEEECCHHCCCCCHHHHHHHHHCC----CEEEEECCCCCCCCCHHHHHH T ss_conf 708999747898689999-999601575577146063100366523321255366----046420335374666899999 Q ss_pred CCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH------HHHHHHHHHHHHHCCC-CCCCCCCC Q ss_conf 4235120677888736984689999999999999999999999852695------3789999999984146-67760011 Q Ver_Hs_NP_0570 102 TGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNA------KAVSEMRQKIWNNMPK-DHPDHELI 174 (351) Q Consensus 102 t~~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~------~~~~~l~qra~~~~~~-dhpD~~~v 174 (351) -...++... -+..+..+.+++..+.-.+- ....=++||..-..-. ..|+.=.+ T Consensus 104 ~~~~~~~~~--------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrv~iA~al~~~P~ilil 163 (240) T d1g2912 104 FPLKLRKVP--------------------RQEIDQRVREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLM 163 (240) T ss_dssp HHHHHTTCC--------------------HHHHHHHHHHHHHHHTCGGGTTCCGGGSCHHHHHHHHHHHHHHTCCSEEEE T ss_pred HHHHHHCCC--------------------HHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEE T ss_conf 989870799--------------------889999999999752915676257000243578899999998609963897 Q ss_pred CCCCCCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHH Q ss_conf 10688779971210001588766789999999999986094688851203456789 Q Ver_Hs_NP_0570 175 DPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKI 230 (351) Q Consensus 175 ~p~piPlvIVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~ 230 (351) | .-+.+.|+.-+..+.+.|+-++..+|.+.+|+|-+-.....+ T Consensus 164 D-------------EPt~gLD~~~~~~i~~~i~~l~~~~g~tii~vsHd~~~v~~l 206 (240) T d1g2912 164 D-------------EPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTM 206 (240) T ss_dssp E-------------CTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHHHHHH T ss_pred E-------------CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH T ss_conf 4-------------770203789999999999999986499899997487999977 No 52 >d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe)} Probab=94.52 E-value=0.049 Score=29.34 Aligned_columns=145 Identities=20% Q ss_pred EEEEEECCCCCHHHHHHHHC--------------------CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCC Q ss_conf 58998659886377777552--------------------7667888753100022111015787111788897157854 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCL--------------------DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTS 92 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl--------------------~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ 92 (351) +|.++|.-++|||||+.|+| ...+..+-+..+++.--.|.++... -+.+.+.-.... T Consensus 26 nI~iiGhVd~GKSTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~er~rg~ti---~~~~~~~~~~~~ 102 (245) T d1r5ba3 26 NIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTV---EVGRAYFETEHR 102 (245) T ss_dssp EEEEEECGGGTHHHHHHHHHHHTTSSCHHHHHHHHHHTCC-------------------------------CCEEECSSE T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCCCC---CCCCCEEECCCC T ss_conf 79998414788688999999972663267899987777650333221000004545310025554---332205402575 Q ss_pred HHHCEEEEECCCCCCEE--------EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC Q ss_conf 20211000042351206--------7788873698468999999999999999999999985269537899999999841 Q Ver_Hs_NP_0570 93 LLDLISIPITGDTLRTF--------SLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNM 164 (351) Q Consensus 93 ls~Li~ipit~~~l~~~--------~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~ 164 (351) .-.+|+.|=-.+-++.+ .+++|+|..+.-. .++.......++-+. T Consensus 103 ~i~iIDtPGH~~f~~~~~~g~~~~D~AiLVVdA~~G~~------------------------~~~~~~~~qtkeh~~--- 155 (245) T d1r5ba3 103 RFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEF------------------------EAGFERGGQTREHAV--- 155 (245) T ss_dssp EEEECCCC-----------CTTSCSEEEEEEECSTTHH------------------------HHTTSTTCCHHHHHH--- T ss_pred EEEEEECCCCCHHHHHHHHHHHHHCEEEEEEECCCCCC------------------------CHHHHHHHHHHHHHH--- T ss_conf 04786077762146889988655121478887678874------------------------012104689999999--- Q ss_pred CCCCCCCCCCCCCCCC-EEEECCEECC-CCCCCHHHHHHHHHHHHHHHHHCCC Q ss_conf 4667760011106887-7997121000-1588766789999999999986094 Q Ver_Hs_NP_0570 165 PKDHPDHELIDPFPVP-LVIIGSKYDV-FQDFESEKRKVICKTLRFVAHYYGA 215 (351) Q Consensus 165 ~~dhpD~~~v~p~piP-lvIVg~KYD~-F~~~D~e~rK~i~r~LR~iAH~yGA 215 (351) .+..+++| ++|+.+|.|. ..+++.+..+.|..-+....+..++ T Consensus 156 --------~~~~l~i~~~IV~vNKiD~~~~~~~~~~~~~i~~~i~~~l~~~~~ 200 (245) T d1r5ba3 156 --------LARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAG 200 (245) T ss_dssp --------HHHHTTCSSEEEEEECTTSTTCSSCHHHHHHHHHHHHHHHHHHHC T ss_pred --------HHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC T ss_conf --------999807994699984137776550278999999999999998505 No 53 >d1dar_2 c.37.1.8 (1-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus} Probab=94.51 E-value=0.11 Score=27.23 Aligned_columns=108 Identities=21% Q ss_pred CEEEEEECCCCCHHHHHHHHC-------CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCC Q ss_conf 458998659886377777552-------7667888753100022111015787111788897157854202110000423 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTIILRCL-------DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGD 104 (351) Q Consensus 32 k~v~~vGsk~~GKTTli~Rfl-------~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~ 104 (351) ++|-++|.-++|||||+.++| ....+.+-+.-+||..--+.++....-..+|+=--| T Consensus 13 Rni~iiGh~~~GKTTL~e~ll~~~g~i~~~g~v~~~~~~~D~~~~E~~r~~si~~~~~~~~~~~---------------- 76 (282) T d1dar_2 13 RNIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKD---------------- 76 (282) T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHCC----------------------------CCEEEEEETT---------------- T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHCCCCEEEEEEEEECCC---------------- T ss_conf 4689994238987899999998611234433344201103111565414772210024540157---------------- Q ss_pred CCCEEEEEEEEECCCHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC Q ss_conf 5120677888736984689999999999999-------------999999999852695378999999998414667760 Q Ver_Hs_NP_0570 105 TLRTFSLVLVLDLSKPNDLWPTMENLLQATK-------------SHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDH 171 (351) Q Consensus 105 ~l~~~~viivlDlSkP~~lw~tle~~l~~vr-------------~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~ 171 (351) .-+-++|.---..++..+...+.+++ .+..++..-+...+ T Consensus 77 -----~~i~~iDtPGh~df~~e~~~al~~~D~ailVida~~Gv~~qT~~~~~~~~~~~---------------------- 129 (282) T d1dar_2 77 -----HRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYK---------------------- 129 (282) T ss_dssp -----EEEEEECCCSSTTCHHHHHHHHHHCSEEEEEEETTTCSCHHHHHHHHHHHHTT---------------------- T ss_pred -----CEEEEEECCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHCC---------------------- T ss_conf -----57899846873467999999988626167777546652405799999999647---------------------- Q ss_pred CCCCCCCCCEEEECCEEC Q ss_conf 011106887799712100 Q Ver_Hs_NP_0570 172 ELIDPFPVPLVIIGSKYD 189 (351) Q Consensus 172 ~~v~p~piPlvIVg~KYD 189 (351) +|.+|+-||.| T Consensus 130 -------ip~ii~iNK~D 140 (282) T d1dar_2 130 -------VPRIAFANKMD 140 (282) T ss_dssp -------CCEEEEEECTT T ss_pred -------CCEEEEEECCC T ss_conf -------98799985127 No 54 >d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis} Probab=94.36 E-value=0.0073 Score=34.43 Aligned_columns=60 Identities=20% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEE Q ss_conf 7458998659886377777552766788875310002211101578711178889715785420211000 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIP 100 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ip 100 (351) ++.+.|+|..|.|||||||+++.+..-.--.+.-...-||-+-.+.. +..++||. ||+.| T Consensus 97 ~~~~~~vG~snVGKSSLIN~L~~~~~~~t~~vs~~~~~g~hTT~~~~------l~~~~g~~----liDTP 156 (231) T d1t9ha2 97 DKTTVFAGQSGVGKSSLLNAISPELGLRTNEISEHLGRGKHTTRHVE------LIHTSGGL----VADTP 156 (231) T ss_dssp TSEEEEEESHHHHHHHHHHHHCC-------------------CCCCC------EEEETTEE----EESSC T ss_pred CCEEEEECCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCCEEEEEEEE------EEECCCEE----EEECC T ss_conf 14368875899848899986304455410145678998368888899------97268758----98568 No 55 >d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima} Probab=93.53 E-value=0.021 Score=31.66 Aligned_columns=26 Identities=15% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCC Q ss_conf 74589986598863777775527667 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDE 56 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e 56 (351) ++...|+|..|.|||||||+.+.+.. T Consensus 95 ~~~~~ivG~sgVGKSTLIN~L~~~~~ 120 (225) T d1u0la2 95 GKISTMAGLSGVGKSSLLNAINPGLK 120 (225) T ss_dssp SSEEEEECSTTSSHHHHHHHHSTTCC T ss_pred CCEEEEECCCCCCHHHHHHHHCCHHH T ss_conf 11257871689888899987316455 No 56 >d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens)} Probab=93.34 E-value=0.15 Score=26.23 Aligned_columns=151 Identities=16% Q ss_pred HHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCC Q ss_conf 11125745899865988637777755276678887531000221110157871117888971578542021100004235 Q Ver_Hs_NP_0570 26 GAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDT 105 (351) Q Consensus 26 ~~~~~ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~ 105 (351) |+-..++-+.+.|..|+|||+|-+.+.-.--.+.+..+++. T Consensus 18 GGl~~G~it~I~G~pGsGKT~l~lqla~~~~~~~~~~~~~~--------------------------------------- 58 (242) T d1n0wa_ 18 GGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEG--------------------------------------- 58 (242) T ss_dssp TSEETTSEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSS--------------------------------------- T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCC--------------------------------------- T ss_conf 88425738999748986588999999999972100011273--------------------------------------- Q ss_pred CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEE Q ss_conf 1206778887369846899999999999999999999998---5269537899999999841466776001110688779 Q Ver_Hs_NP_0570 106 LRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKL---GKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLV 182 (351) Q Consensus 106 l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l---~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlv 182 (351) .++.+|...+-.. .-+...++......+++...+ .-.+.....++.+++...+....+++=.+|.+....- T Consensus 59 -----~vlyi~~E~~~~~-~rl~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~l~~~i~~~~~~lvVIDsi~~~~~ 132 (242) T d1n0wa_ 59 -----KAMYIDTEGTFRP-ERLLAVAERYGLSGSDVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYR 132 (242) T ss_dssp -----EEEEEESSSCCCH-HHHHHHHHHTTCCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHHSCEEEEEEETSSGGGC T ss_pred -----EEEEEECCCCHHH-HHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHH T ss_conf -----4899854662358-9999999864988889864432024588355899999999999852896588741001212 Q ss_pred EECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 9712100015887667899999999999860946888512 Q Ver_Hs_NP_0570 183 IIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSK 222 (351) Q Consensus 183 IVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk 222 (351) ..-...+...+ .......+.+.|+.+|..++..++++++ T Consensus 133 ~~~~~~~~~~~-r~~~l~~~~~~L~~lA~~~~~~Vvvtnq 171 (242) T d1n0wa_ 133 TDYSGRGELSA-RQMHLARFLRMLLRLADEFGVAVVITNQ 171 (242) T ss_dssp -------CHHH-HHHHHHHHHHHHHHHHHHHCCEEEEEC- T ss_pred HHCCCCCCHHH-HHHHHHHHHHHHHHHHHHCCCEEEEECC T ss_conf 21157775579-9999999999999999865986999822 No 57 >d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae} Probab=92.41 E-value=0.019 Score=31.87 Aligned_columns=45 Identities=13% Q ss_pred CEEEEEECCCCCHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCCCC Q ss_conf 4589986598863777775527667888-75310002211101578 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTIILRCLDRDEPPK-PTLALEYTYGRRAKGHN 76 (351) Q Consensus 32 k~v~~vGsk~~GKTTli~Rfl~r~e~~K-PTlALeYtygRra~~~~ 76 (351) +.|.++|..|+|||||++....+-..+. |+.+=++..++...... T Consensus 8 ~~I~i~G~~g~GKSTL~n~L~~~~~~~~~~e~~r~~~~~~~~~~~~ 53 (192) T d1lw7a2 8 KTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQ 53 (192) T ss_dssp EEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHHHHHSSSSCTT T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHH T ss_conf 0788873899878899999998718833652101222100101014 No 58 >d1gky__ c.37.1.1 (-) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae)} Probab=92.34 E-value=0.04 Score=29.89 Aligned_columns=58 Identities=14% Q ss_pred CEEEEEECCCCCHHHHHHHHC--------------CCCCCCCCCCCCCHHHHHH--HCCCCCCCEEEEEEEECC Q ss_conf 458998659886377777552--------------7667888753100022111--015787111788897157 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTIILRCL--------------DRDEPPKPTLALEYTYGRR--AKGHNTPKDIAHFWELGG 89 (351) Q Consensus 32 k~v~~vGsk~~GKTTli~Rfl--------------~r~e~~KPTlALeYtygRr--a~~~~~~KdvaH~WELGg 89 (351) |.++++|..|+|||||+.+.+ +|.-.+-..-+.+|-|.++ -..-......+..|+.++ T Consensus 2 R~Ivi~GPsG~GK~tl~~~l~~~~~~~~~~~~~~ttR~~r~~E~~g~~y~fvs~~~f~~~i~~~~~~e~~~~~~ 75 (186) T d1gky__ 2 RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSG 75 (186) T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTTEEECCEEECSCCCTTCCBTTTEEECCHHHHHHHHHTTCEEEEEEETT T ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHCC T ss_conf 35899727887788999999986799705778775237753312672100148799999986044201000033 No 59 >d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=91.98 E-value=0.093 Score=27.59 Aligned_columns=152 Identities=11% Q ss_pred HHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCC Q ss_conf 11125745899865988637777755276678887531000221110157871117888971578542021100004235 Q Ver_Hs_NP_0570 26 GAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDT 105 (351) Q Consensus 26 ~~~~~ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~ 105 (351) |+-....-+.+.|..|+|||+|-+.+.-.-. .+..... T Consensus 29 GGi~~G~lt~I~G~~GsGKT~l~l~l~~~~~------------------------------------------~~~~~~~ 66 (251) T d1szpa2 29 GGVETGSITELFGEFRTGKSQLCHTLAVTCQ------------------------------------------IPLDIGG 66 (251) T ss_dssp SSEESSSEEEEEESTTSSHHHHHHHHTTTTT------------------------------------------SCTTTTC T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHHHH------------------------------------------HHHCCCC T ss_conf 8864674899965888778899999999998------------------------------------------4210156 Q ss_pred CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEC Q ss_conf 12067788873698468999999999999999999999985269537899999999841466776001110688779971 Q Ver_Hs_NP_0570 106 LRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIG 185 (351) Q Consensus 106 l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg 185 (351) ....++.|-...+-+.+.+..+..-+..-....-.-+....-.+.....++.+.+...+....+++=.+|.+... .- T Consensus 67 ~~~~vlyi~~E~~~~~~rl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liVIDsi~~l---~~ 143 (251) T d1szpa2 67 GEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMAL---YR 143 (251) T ss_dssp CSCEEEEEESSSCCCGGGGHHHHHHTCCCHHHHGGGEEEEECCSTTTHHHHHHHTHHHHHHSCEEEEEEETGGGG---GS T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHH---HH T ss_conf 785799982457302799999998707763566521011231653569999999999997279728998411233---11 Q ss_pred CEECCCCCCCHHHHHH--HHHHHHHHHHHCCCEEEEEEC Q ss_conf 2100015887667899--999999999860946888512 Q Ver_Hs_NP_0570 186 SKYDVFQDFESEKRKV--ICKTLRFVAHYYGASLMFTSK 222 (351) Q Consensus 186 ~KYD~F~~~D~e~rK~--i~r~LR~iAH~yGA~L~FtSk 222 (351) ..|+.-.+.....+.+ +.+.||.+|+.||+..+++++ T Consensus 144 ~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~v~vvvtnq 182 (251) T d1szpa2 144 TDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTNQ 182 (251) T ss_dssp CC-----CTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE T ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC T ss_conf 003677765789999999999999999864987999822 No 60 >d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens)} Probab=91.88 E-value=0.049 Score=29.33 Aligned_columns=58 Identities=10% Q ss_pred CEEEEEECCCCCHHHHHHHHC--------------CCCCCCCCCCCCCHHHHHHHCCCCC--CCEEEEEEEECC Q ss_conf 458998659886377777552--------------7667888753100022111015787--111788897157 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTIILRCL--------------DRDEPPKPTLALEYTYGRRAKGHNT--PKDIAHFWELGG 89 (351) Q Consensus 32 k~v~~vGsk~~GKTTli~Rfl--------------~r~e~~KPTlALeYtygRra~~~~~--~KdvaH~WELGg 89 (351) |-++++|-.|+|||||+.+.+ +|.-.+...-+.||-|..+...+.. ....+-.|+..| T Consensus 4 k~ivi~GPSG~GK~tl~~~l~~~~~~~~~~~vs~TTR~~r~gE~~G~dY~Fvs~e~F~~~i~~~~fie~~~~~g 77 (178) T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGSHED 77 (178) T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCC---CCBTTTBEECCHHHHHHHHHTTCEEEEEEETT T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECC T ss_conf 54889827887788999999985888568887642068877754575556379899999997077555432010 No 61 >d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii} Probab=91.28 E-value=0.39 Score=23.77 Aligned_columns=170 Identities=14% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHH-HCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEE Q ss_conf 74589986598863777775527667888753100022111-01578711178889715785420211000042351206 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRR-AKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTF 109 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRr-a~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~ 109 (351) +..+-++|..|||||||+ |.+.+-. +|+-+-=|--|+. .......+.+.-+-+-........+.+-..-....+. T Consensus 32 Gei~gliG~nGaGKSTLl-~~l~Gl~--~p~~G~I~~~g~~i~~~~~~~r~i~~v~q~~~l~~~~tv~en~~~~~~~~~- 107 (239) T d1v43a3 32 GEFLVLLGPSGCGKTTTL-RMIAGLE--EPTEGRIYFGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKK- 107 (239) T ss_dssp TCEEEEECCTTSSHHHHH-HHHHTSS--CCSEEEEEETTEECTTSCGGGGTEEEEEC------CCCHHHHHHTTC--CC- T ss_pred CCEEEEECCCCCCHHHHH-HHHHCCC--CCCCCEEEECCCCCCCCCHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHCC- T ss_conf 708999716898589999-9870676--666677887882122278527005323212676755548999998776328- Q ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCEEEECCEE Q ss_conf 778887369846899999999999999999999998526953789999999984146-6776001110688779971210 Q Ver_Hs_NP_0570 110 SLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPK-DHPDHELIDPFPVPLVIIGSKY 188 (351) Q Consensus 110 ~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~-dhpD~~~v~p~piPlvIVg~KY 188 (351) .....+....+.+++.+ .+-..+.+.......-++||+.-..-. .+|+.=.+| T Consensus 108 --------~~~~~~~~~~~~~l~~~-----~l~~~~~~~~~~LSGG~~Qrv~iAraL~~~p~ililD------------- 161 (239) T d1v43a3 108 --------FPKDEIDKRVRWAAELL-----QIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMD------------- 161 (239) T ss_dssp --------CCHHHHHHHHHHHHHHT-----TCGGGTTSCTTTCCSSCHHHHHHHHHHTTCCSEEEEE------------- T ss_pred --------CCHHHHHHHHHHHHHHC-----CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHH------------- T ss_conf --------88889999999999740-----7124665200012530378999999986483010133------------- Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHH Q ss_conf 001588766789999999999986094688851203456789 Q Ver_Hs_NP_0570 189 DVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKI 230 (351) Q Consensus 189 D~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~ 230 (351) +-+.+.|+..++.+-..|+.++..+|.++++.|-+-....++ T Consensus 162 EPt~gLD~~~~~~i~~~l~~l~~~~g~tvi~vtHdl~~~~~~ 203 (239) T d1v43a3 162 EPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTM 203 (239) T ss_dssp STTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHHHHHH T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH T ss_conf 104211478899999999999996398799997387999976 No 62 >d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis} Probab=91.13 E-value=0.057 Score=28.91 Aligned_columns=23 Identities=35% Q ss_pred EEEEEECCCCCHHHHHHHHCCCC Q ss_conf 58998659886377777552766 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCLDRD 55 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl~r~ 55 (351) .|.|||..|.|||||||+++.+. T Consensus 114 ~v~vvG~PNVGKSSliN~L~~~~ 136 (273) T d1puja_ 114 RALIIGIPNVGKSTLINRLAKKN 136 (273) T ss_dssp EEEEEESTTSSHHHHHHHHHTSC T ss_pred EEEEEECCCCCHHHHHHHHHCCC T ss_conf 89998558773578887764264 No 63 >d1t4ga2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae} Probab=91.13 E-value=0.37 Score=23.86 Aligned_columns=154 Identities=19% Q ss_pred CHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCC Q ss_conf 01112574589986598863777775527667888753100022111015787111788897157854202110000423 Q Ver_Hs_NP_0570 25 DGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGD 104 (351) Q Consensus 25 ~~~~~~ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~ 104 (351) .|+-..+.-+++.|..|+|||+|.+.|.-.--.+.+...+..+..+....+.. +..++--+ T Consensus 28 ~GGl~~G~i~~i~G~~G~GKT~l~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~---vlyi~~e~---------------- 88 (258) T d1t4ga2 28 GGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPK---AVYIDTEG---------------- 88 (258) T ss_dssp TTSEEBTSEEEEEESTTSSHHHHHHHHHHHTTCGGGEECCTTTSCGGGGSSEE---EEEEESSS---------------- T ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCE---EEEEECCC---------------- T ss_conf 48833573899962898728899999999986267741320111111220034---88985278---------------- Q ss_pred CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCE Q ss_conf 51206778887369846899999999999999999999998---526953789999999984146677600111068877 Q Ver_Hs_NP_0570 105 TLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKL---GKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPL 181 (351) Q Consensus 105 ~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l---~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPl 181 (351) .--+..+...++...-...+++.+. ...+......+.....+.+...++ +.+ T Consensus 89 ----------------~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~l 143 (258) T d1t4ga2 89 ----------------TFRPERIMQMAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNN---------IKL 143 (258) T ss_dssp ----------------CCCHHHHHHHHHHHTSCHHHHHHTEEEEECSSHHHHHHHHHTHHHHHHTTCE---------EEE T ss_pred ----------------CCCHHHHHHHHHHCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCC---------CEE T ss_conf ----------------7488999999987188866876240021027866899999999999972289---------518 Q ss_pred EEECCEECCCCCCCHHH---------HHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 99712100015887667---------899999999999860946888512 Q Ver_Hs_NP_0570 182 VIIGSKYDVFQDFESEK---------RKVICKTLRFVAHYYGASLMFTSK 222 (351) Q Consensus 182 vIVg~KYD~F~~~D~e~---------rK~i~r~LR~iAH~yGA~L~FtSk 222 (351) |||=+--..|...-... ...+.+.|+.+|+.||...+++++ T Consensus 144 VVIDsi~~l~~~~~~~~~~~~~~~~~l~~~~~~L~~la~~~~~~vi~~nq 193 (258) T d1t4ga2 144 VVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTNQ 193 (258) T ss_dssp EEEECSSHHHHHHSCSTTSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEE T ss_pred EEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE T ss_conf 99811012100100478864689999999999999999852997999810 No 64 >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)} Probab=90.24 E-value=0.054 Score=29.08 Aligned_columns=58 Identities=19% Q ss_pred CEEEEEECCCCCHHHHHHHHC--------------CCCCCCCCCCCCCHHHHHHHCCCCCCCEE--EEEEEECC Q ss_conf 458998659886377777552--------------76678887531000221110157871117--88897157 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTIILRCL--------------DRDEPPKPTLALEYTYGRRAKGHNTPKDI--AHFWELGG 89 (351) Q Consensus 32 k~v~~vGsk~~GKTTli~Rfl--------------~r~e~~KPTlALeYtygRra~~~~~~Kdv--aH~WELGg 89 (351) |.|+++|-.|+||+||+.+.+ +|.-.+...-+-||-|..+.......++= +..|+..| T Consensus 1 r~ivi~GpsG~GK~tl~~~l~~~~~~~~~~~v~~TTR~~R~gE~~G~dY~Fvs~~~f~~~i~~~~fie~~~~~g 74 (190) T d1lvga_ 1 RPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSG 74 (190) T ss_dssp CCEEEECCTTSSHHHHHHHHHHHHTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETT T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCC T ss_conf 92889707877788999999985789616787554138986500375633069899999986596899873255 No 65 >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus} Probab=90.13 E-value=0.063 Score=28.66 Aligned_columns=21 Identities=29% Q ss_pred CEEEEEECCCCCHHHHHHHHC Q ss_conf 458998659886377777552 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTIILRCL 52 (351) Q Consensus 32 k~v~~vGsk~~GKTTli~Rfl 52 (351) |-+-++|.+|||||||+.+.. T Consensus 2 ki~~IvG~sgSGKTTLi~~Li 22 (165) T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWV 22 (165) T ss_dssp CEEEEECCTTSSHHHHHHHHH T ss_pred EEEEEEECCCCCHHHHHHHHH T ss_conf 688997069998899999999 No 66 >d1q12a2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli} Probab=90.03 E-value=1.7 Score=19.85 Aligned_columns=170 Identities=13% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHH-HCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEE Q ss_conf 74589986598863777775527667888753100022111-01578711178889715785420211000042351206 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRR-AKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTF 109 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRr-a~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~ 109 (351) +..+-++|..|||||||+.-..+- .+||-+==|-.++. ..-....+.+..+.+--.........+-..-+..++.. T Consensus 26 Gei~~iiG~nGaGKSTllk~i~G~---~~p~~G~I~~~g~~~~~~~~~~~~ig~v~Q~~~l~~~ltv~~ni~~~~~~~~~ 102 (232) T d1q12a2 26 GEFVVFVGPSGCGKSTLLRMIAGL---ETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGA 102 (232) T ss_dssp TCEEEEECSTTSSHHHHHHHHHSS---SCCSEEEECSTTSCCTTSCGGGSSEEEECTTCCCCTTSCTTTTTTGGGSTTCC T ss_pred CCEEEEECCCCCCHHHHHHHHHHC---CCCCCCEEEECCCCCCCCHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCCC T ss_conf 708999737898789999999720---46568868888823245225740434422113446330189999975663157 Q ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCEEEECCEE Q ss_conf 778887369846899999999999999999999998526953789999999984146-6776001110688779971210 Q Ver_Hs_NP_0570 110 SLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPK-DHPDHELIDPFPVPLVIIGSKY 188 (351) Q Consensus 110 ~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~-dhpD~~~v~p~piPlvIVg~KY 188 (351) . .-........-++. -.+-..+.+.......-++||+.-..-. -.|+.=.+| T Consensus 103 ~-----~~~~~~~~~~~~~~---------~~l~~~~~~~~~~lSgG~~Qrl~iAral~~~P~ililD------------- 155 (232) T d1q12a2 103 K-----KEVINQRVNQVAEV---------LQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLD------------- 155 (232) T ss_dssp C-----TTTTTTHHHHHHHH---------TTCGGGTTCCGGGSCHHHHHHHHHHHHHHTCCSEEEEE------------- T ss_pred C-----HHHHHHHHHHHHHH---------CCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE------------- T ss_conf 8-----88999998778875---------06520222476524521378999999997299658851------------- Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHH Q ss_conf 001588766789999999999986094688851203456789 Q Ver_Hs_NP_0570 189 DVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKI 230 (351) Q Consensus 189 D~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~ 230 (351) .-+.+.|+..+..+-..|+-++...|.+.+|+|-+-....++ T Consensus 156 EPt~gLD~~~~~~i~~~i~~l~~~~g~tii~vtH~~~~~~~~ 197 (232) T d1q12a2 156 EPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTL 197 (232) T ss_dssp STTTTSCHHHHHHHHHHHHHHHHHTCCEEEEECSCHHHHHHH T ss_pred CCHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHH T ss_conf 722103788999999999999987298389998087999976 No 67 >d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus} Probab=88.52 E-value=0.7 Score=22.18 Aligned_columns=167 Identities=13% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCC----CHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCC Q ss_conf 7458998659886377777552766788875310----002211101578711178889715785420211000042351 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLAL----EYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTL 106 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlAL----eYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l 106 (351) +..+-++|..|||||||+ +++.+-..|.-...+ +.+.-.+.......+.|+.+-+-.+........+-..-+... T Consensus 31 Gei~~liG~nGaGKSTll-~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~ 109 (242) T d1oxxk2 31 GERFGILGPSGAGKTTFM-RIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTN 109 (242) T ss_dssp TCEEEEECSCHHHHHHHH-HHHHTSSCCSEEEEEETTEEEEETTEESSCGGGSCEEEEETTSCCCTTSCHHHHHHGGGTT T ss_pred CCEEEEECCCCCCHHHHH-HHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHH T ss_conf 718999727898689999-9985168887777898771244577433117753530443011227576599999988753 Q ss_pred CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECC Q ss_conf 20677888736984689999999999999999999999852695378999999998414667760011106887799712 Q Ver_Hs_NP_0570 107 RTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGS 186 (351) Q Consensus 107 ~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvIVg~ 186 (351) + -..+..+..-++.+++.. .+...+.+.......-++||..-+. ...+ T Consensus 110 ~---------~~~~~~~~~~~~~~l~~~-----~l~~~~~~~~~~LSgGq~qrv~iAr------------------al~~ 157 (242) T d1oxxk2 110 M---------KMSKEEIRKRVEEVAKIL-----DIHHVLNHFPRELSGAQQQRVALAR------------------ALVK 157 (242) T ss_dssp S---------SCCHHHHHHHHHHHHHHT-----TCGGGTTSCGGGSCHHHHHHHHHHH------------------HHTT T ss_pred H---------HHHHHHHHHHHHHHHHHC-----CHHHHHHHHCCCCCHHHHHHHHHHH------------------HHHC T ss_conf 0---------013688999999999840-----6357765211358667899999999------------------8626 Q ss_pred EECCC------CCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHH Q ss_conf 10001------588766789999999999986094688851203456789 Q Ver_Hs_NP_0570 187 KYDVF------QDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKI 230 (351) Q Consensus 187 KYD~F------~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk~e~l~~r~ 230 (351) +-|+. .+.|+.-+..|-+.++-+....|.+.+|+|-+.....++ T Consensus 158 ~P~iLlLDEPt~gLD~~~~~~i~~~i~~l~~~~g~tIi~vsHdl~~~~~~ 207 (242) T d1oxxk2 158 DPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAI 207 (242) T ss_dssp CCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHH T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH T ss_conf 99689972750013789999999999999985398899996388999987 No 68 >d1s4qa_ c.37.1.1 (A:) Guanylate kinase {Mycobacterium tuberculosis} Probab=88.33 E-value=0.1 Score=27.33 Aligned_columns=29 Identities=21% Q ss_pred CCCEEEEEECCCCCHHHHHHHHCCCCCCC Q ss_conf 57458998659886377777552766788 Q Ver_Hs_NP_0570 30 AEKFVFFIGSKNGGKTTIILRCLDRDEPP 58 (351) Q Consensus 30 ~ek~v~~vGsk~~GKTTli~Rfl~r~e~~ 58 (351) .++.+.++|-.|||||||+..+.+..++. T Consensus 1 ~G~ii~iiGpsGaGKsTL~~~l~g~~~~~ 29 (183) T d1s4qa_ 1 VGRVVVLSGPSAVGKSTVVRCLRERIPNL 29 (183) T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHHSTTC T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHCCCC T ss_conf 94689997689987889999998526887 No 69 >d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli} Probab=88.19 E-value=0.088 Score=27.75 Aligned_columns=37 Identities=14% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHH Q ss_conf 7458998659886377777552766788875310002 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYT 67 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYt 67 (351) ++.++++|-.|+||+||+.+.+.+.....-..+.-|| T Consensus 2 g~livi~GPSG~GK~tl~~~l~~~~~~~~~~~~v~~T 38 (205) T d1s96a_ 2 GTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHT 38 (205) T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHSCTTTEEECCCEE T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEE T ss_conf 5789997488888889999999747778706899875 No 70 >d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens)} Probab=87.92 E-value=0.63 Score=22.47 Aligned_columns=154 Identities=16% Q ss_pred HHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEE--ECC Q ss_conf 111257458998659886377777552766788875310002211101578711178889715785420211000--042 Q Ver_Hs_NP_0570 26 GAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIP--ITG 103 (351) Q Consensus 26 ~~~~~ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ip--it~ 103 (351) |+-...+.+.+.|..|+|||+|.+.|+-.-..+.+...... .+=+...-+.....-|.++. ... T Consensus 32 GGl~~G~i~~i~G~pGsGKT~l~l~~~~~~~~~~~~~~~~~--------------~v~yi~~e~~~~~~rl~~~~~~~~~ 97 (258) T d1v5wa_ 32 GGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGG--------------KIIFIDTENTFRPDRLRDIADRFNV 97 (258) T ss_dssp SSBCSSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCC--------------EEEEEESSSCCCHHHHHHHHHHTTC T ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCC--------------EEEEEECCCCHHHHHHHHHHHHCCC T ss_conf 88446758999648975089999999999971122345684--------------6999835774018999999987188 Q ss_pred CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE Q ss_conf 35120677888736984689999999999999999999999852695378999999998414667760011106887799 Q Ver_Hs_NP_0570 104 DTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVI 183 (351) Q Consensus 104 ~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p~piPlvI 183 (351) +.-..+.-+.+........++..++.+ ..........+++=.+|......-. T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~----------------------------~~~~~~~~~~~~lvviDsi~~~~~~ 149 (258) T d1v5wa_ 98 DHDAVLDNVLYARAYTSEHQMELLDYV----------------------------AAKFHEEAGIFKLLIIDSIMALFRV 149 (258) T ss_dssp CHHHHHHTEEEEECCSTTHHHHHHHHH----------------------------HHHHHHSCSSEEEEEEETSGGGHHH T ss_pred CHHHHHHHHHHHCCCCHHHHHHHHHHH----------------------------HHHHHHHCCCCEEEEEEECHHHHHH T ss_conf 878977455421107866899999999----------------------------9999862488559998501011000 Q ss_pred ECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 712100015887667899999999999860946888512 Q Ver_Hs_NP_0570 184 IGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSK 222 (351) Q Consensus 184 Vg~KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk 222 (351) ..+..+.+.. .......+.+.|+.+|+.|++..+++++ T Consensus 150 ~~~~~~~~~~-~~~~l~~~~~~L~~la~~~~~~vi~~nq 187 (258) T d1v5wa_ 150 DFSGRGELAE-RQQKLAQMLSRLQKISEEYNVAVFVTNQ 187 (258) T ss_dssp HCCGGGCHHH-HHHHHHHHHHHHHHHHHHHTCEEEEEEC T ss_pred CCCCCCCHHH-HHHHHHHHHHHHHHHHHHCCCEEEEEEE T ss_conf 0267774368-9999999999999999864986999800 No 71 >d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae} Probab=87.30 E-value=0.25 Score=24.97 Aligned_columns=45 Identities=33% Q ss_pred EEEEECCCCCHHHH---HHHHCC-CCCCCCCCCCCCHHHHHHHCCCCCCCEEEEE Q ss_conf 89986598863777---775527-6678887531000221110157871117888 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTI---ILRCLD-RDEPPKPTLALEYTYGRRAKGHNTPKDIAHF 84 (351) Q Consensus 34 v~~vGsk~~GKTTl---i~Rfl~-r~e~~KPTlALeYtygRra~~~~~~KdvaH~ 84 (351) |++-|+=|+||||+ +.+.|+ ...+.-||-.|-..|- .....|.|+ T Consensus 36 I~L~GdLGaGKTtfvk~i~~~lg~~~~V~SPTF~lv~~Y~------~~~~~i~H~ 84 (158) T d1htwa_ 36 VYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYN------IAGKMIYHF 84 (158) T ss_dssp EEEECSTTSSHHHHHHHHHHHTTCCSCCCCCTTTCEEEEE------ETTEEEEEE T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEE------CCCCEEEEE T ss_conf 9986287788789999999971878874687135678510------899408998 No 72 >d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei} Probab=87.04 E-value=0.063 Score=28.66 Aligned_columns=69 Identities=19% Q ss_pred CCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC----CCCCEEEEEEEECC Q ss_conf 5766611011125745899865988637777755276678887531000221110157----87111788897157 Q Ver_Hs_NP_0570 18 GINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGH----NTPKDIAHFWELGG 89 (351) Q Consensus 18 ~~~~~~~~~~~~~ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~----~~~KdvaH~WELGg 89 (351) ++...-|-..+..++-|++.|.+|+||||+-+..+.| --.=+|=|+.+.++..++ ..|.-+.|+-|+-| T Consensus 1 er~~lHgs~v~i~G~gvLi~G~SG~GKStlAl~Li~r---G~~lvaDD~v~i~~~~~~~L~g~~p~~l~~~lEiRG 73 (176) T d1kkma_ 1 ERRSMHGVLVDIYGLGVLITGDSGVGKSETALELVQR---GHRLIADDRVDVYQQDEQTIVGAAPPILSHLLEIRG 73 (176) T ss_dssp CCEEEEEEEEEETTEEEEEECCTTSCHHHHHHHHHHT---TCEEEEEEEEEEEEEETTEEEEECCGGGTTEEEETT T ss_pred CCEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHH---HHHHHCCCEEEEEECCCCEEEECCCHHHHCCEEEEE T ss_conf 9416788778776848999769999878999999983---105323775899982897688728834415222100 No 73 >d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus} Probab=86.84 E-value=0.09 Score=27.67 Aligned_columns=59 Identities=24% Q ss_pred HCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC----CCCCEEEEEEEECC Q ss_conf 125745899865988637777755276678887531000221110157----87111788897157 Q Ver_Hs_NP_0570 28 EIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGH----NTPKDIAHFWELGG 89 (351) Q Consensus 28 ~~~ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~----~~~KdvaH~WELGg 89 (351) +..++-|++.|.+|+||||+-+++++|.-. =+|=|+.+.++..++ ..|.-+.|+-|+-| T Consensus 12 ~i~g~gvli~G~sG~GKS~lal~Li~rG~~---lvaDD~v~i~~~~~~~l~g~~p~~l~~~lEiRG 74 (169) T d1ko7a2 12 DVYGVGVLITGDSGIGKSETALELIKRGHR---LVADDNVEIREISKDELIGRAPKLIEHLLEIRG 74 (169) T ss_dssp EETTEEEEEEESTTSSHHHHHHHHHHTTCE---EEESSEEEEEESSSSCEEEECCGGGTTEEEETT T ss_pred EECCEEEEEECCCCCCHHHHHHHHHHHCCH---HCCCCEEEEEECCCCEEEEECCHHHHCCEEEEE T ss_conf 886858999769999878999999971322---002775899985898699827835516334300 No 74 >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli} Probab=86.34 E-value=0.14 Score=26.57 Aligned_columns=19 Identities=26% Q ss_pred EEEEECCCCCHHHHHHHHC Q ss_conf 8998659886377777552 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCL 52 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl 52 (351) +-++|-+|||||||+.+.+ T Consensus 5 v~i~G~~GSGKTTLl~~L~ 23 (170) T d1np6a_ 5 LAFAAWSGTGKTTLLKKLI 23 (170) T ss_dssp EEEECCTTSCHHHHHHHHH T ss_pred EEEECCCCCCHHHHHHHHH T ss_conf 9997369998789999999 No 75 >d1fts_2 c.37.1.10 (285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli} Probab=85.87 E-value=0.16 Score=26.11 Aligned_columns=19 Identities=32% Q ss_pred CCEEEEEECCCCCHHHHHH Q ss_conf 7458998659886377777 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIIL 49 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~ 49 (351) .+.+.+||-.||||||+++ T Consensus 9 g~vv~ivG~sGsGKSTll~ 27 (211) T d1fts_2 9 PFVILMVGVNGVGKTTTIG 27 (211) T ss_dssp TEEEEEECCTTSSHHHHHH T ss_pred CEEEEEECCCCCCHHHHHH T ss_conf 7589997379997899999 No 76 >d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus} Probab=85.50 E-value=0.15 Score=26.36 Aligned_columns=38 Identities=21% Q ss_pred HCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 12574589986598863777775527667888753100 Q Ver_Hs_NP_0570 28 EIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALE 65 (351) Q Consensus 28 ~~~ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALe 65 (351) |-.++.+.+||-.||||||++.....--.+..-...++ T Consensus 3 ~p~Geii~lvG~sGaGKTTl~~~L~gll~p~~G~I~i~ 40 (207) T d1okkd2 3 EPKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFC 40 (207) T ss_dssp CCSSSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEE T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEE T ss_conf 99953899875899978999999872117788768984 No 77 >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4} Probab=84.75 E-value=0.15 Score=26.39 Aligned_columns=23 Identities=26% Q ss_pred CEEEEEECCCCCHHHHHHHHCCC Q ss_conf 45899865988637777755276 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTIILRCLDR 54 (351) Q Consensus 32 k~v~~vGsk~~GKTTli~Rfl~r 54 (351) +-|+++|-.||||||+..+...+ T Consensus 3 klI~l~G~pGSGKTT~a~~l~~~ 25 (152) T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAK 25 (152) T ss_dssp EEEEEECCTTSSHHHHHHHHHHH T ss_pred EEEEEECCCCCCHHHHHHHHHHH T ss_conf 78898758999878899999996 No 78 >d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii} Probab=84.61 E-value=0.28 Score=24.63 Aligned_columns=27 Identities=30% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCC Q ss_conf 7458998659886377777552766788 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPP 58 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~ 58 (351) +..+-++|..|||||||+ +.+.+-..| T Consensus 31 Ge~~~iiG~sGsGKSTL~-~~l~gl~~p 57 (230) T d1l2ta_ 31 GEFVSIMGPSGSGKSTML-NIIGCLDKP 57 (230) T ss_dssp TCEEEEECSTTSSHHHHH-HHHTTSSCC T ss_pred CCEEEEECCCCCCHHHHH-HHHHHCCCC T ss_conf 728999726998789999-998620576 No 79 >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori} Probab=84.46 E-value=0.23 Score=25.18 Aligned_columns=24 Identities=33% Q ss_pred CCCEEEEEECCCCCHHHHHHHHCC Q ss_conf 574589986598863777775527 Q Ver_Hs_NP_0570 30 AEKFVFFIGSKNGGKTTIILRCLD 53 (351) Q Consensus 30 ~ek~v~~vGsk~~GKTTli~Rfl~ 53 (351) ..++|++.|.-||||||+++-.+. T Consensus 165 ~~~nIlIsG~tgSGKTT~l~al~~ 188 (323) T d1g6oa_ 165 IGKNVIVCGGTGSGKTTYIKSIME 188 (323) T ss_dssp HTCCEEEEESTTSSHHHHHHHHGG T ss_pred CCCCEEEECCCCCHHHHHHHHHHH T ss_conf 689799983899747999999997 No 80 >d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens)} Probab=84.45 E-value=0.29 Score=24.56 Aligned_columns=27 Identities=22% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCC Q ss_conf 7458998659886377777552766788 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPP 58 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~ 58 (351) +..+-++|..|||||||+ +++.+-..| T Consensus 40 Ge~~~iiG~nGsGKSTLl-~~i~Gl~~p 66 (251) T d1jj7a_ 40 GEVTALVGPNGSGKSTVA-ALLQNLYQP 66 (251) T ss_dssp TCEEEEECSTTSSHHHHH-HHHTTSSCC T ss_pred CCEEEEECCCCCCHHHHH-HHHHHCCCC T ss_conf 848999748998789999-998620389 No 81 >d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli} Probab=83.91 E-value=0.3 Score=24.45 Aligned_columns=21 Identities=29% Q ss_pred CCEEEEEECCCCCHHHHHHHH Q ss_conf 745899865988637777755 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRC 51 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rf 51 (351) .|.|.+.|..||||||+..+. T Consensus 2 ~k~I~i~G~~GsGKsT~~~~L 22 (210) T d4tmka_ 2 SKYIVIEGLEGAGKTTARNVV 22 (210) T ss_dssp CCEEEEEECTTSCHHHHHHHH T ss_pred CEEEEEECCCCCCHHHHHHHH T ss_conf 607898768999878999999 No 82 >d1mt0a_ c.37.1.12 (A:) Haemolysin B ATP-binding protein {Escherichia coli} Probab=82.96 E-value=0.35 Score=24.01 Aligned_columns=27 Identities=22% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCC Q ss_conf 7458998659886377777552766788 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPP 58 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~ 58 (351) ...+.++|..|||||||+ +.+.+-..| T Consensus 29 Ge~~~i~G~nGsGKSTLl-~~l~Gl~~p 55 (241) T d1mt0a_ 29 GEVIGIVGRSGSGKSTLT-KLIQRFYIP 55 (241) T ss_dssp TCEEEEECSTTSSGGGHH-HHHTTSSCC T ss_pred CCEEEEECCCCCCHHHHH-HHHHHHCCC T ss_conf 858999738998689999-999731147 No 83 >d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae} Probab=82.67 E-value=0.34 Score=24.11 Aligned_columns=27 Identities=22% Q ss_pred HCCCCEEEEEECCCCCHHHHHHHHCCC Q ss_conf 125745899865988637777755276 Q Ver_Hs_NP_0570 28 EIAEKFVFFIGSKNGGKTTIILRCLDR 54 (351) Q Consensus 28 ~~~ek~v~~vGsk~~GKTTli~Rfl~r 54 (351) +..++-|++.|.+|+||||+-+..+.| T Consensus 12 ~i~G~gvLi~G~sG~GKS~lAl~Li~r 38 (177) T d1knxa2 12 EVFGVGVLLTGRSGIGKSECALDLINK 38 (177) T ss_dssp EETTEEEEEEESSSSSHHHHHHHHHTT T ss_pred EECCEEEEEECCCCCCHHHHHHHHHHH T ss_conf 885858999769999878999999971 No 84 >d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans} Probab=82.35 E-value=0.75 Score=21.98 Aligned_columns=140 Identities=16% Q ss_pred CCHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECC Q ss_conf 10111257458998659886377777552766788875310002211101578711178889715785420211000042 Q Ver_Hs_NP_0570 24 GDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITG 103 (351) Q Consensus 24 ~~~~~~~ek~v~~vGsk~~GKTTli~Rfl~r~e~~KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~ 103 (351) +.||-.....+.+.|..|+|||+|-+.++- .. T Consensus 50 ~~GGl~~G~it~i~G~pg~GKT~lal~~~~------------------------------------------------~~ 81 (268) T d1xp8a1 50 GVGGIPRGRITEIYGPESGGKTTLALAIVA------------------------------------------------QA 81 (268) T ss_dssp SSSSEETTSEEEEEESTTSSHHHHHHHHHH------------------------------------------------HH T ss_pred CCCCCCCCCEEEEECCCCCHHHHHHHHHHH------------------------------------------------HH T ss_conf 168953362589931763048899999999------------------------------------------------99 Q ss_pred CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCCC Q ss_conf 3512067788873698468999999999999999999999985269537899999999841466776001110---6887 Q Ver_Hs_NP_0570 104 DTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDP---FPVP 180 (351) Q Consensus 104 ~~l~~~~viivlDlSkP~~lw~tle~~l~~vr~~v~kl~~~l~k~~~~~~~~l~qra~~~~~~dhpD~~~v~p---~piP 180 (351) ..-...++++-...|-+......+..-+. ++--..+...+++.+.+...+....+++=.+|. +... T Consensus 82 ~~~~~~v~yi~~E~~~~~~~~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~livIDsi~~l~~~ 150 (268) T d1xp8a1 82 QKAGGTCAFIDAEHALDPVYARALGVNTD-----------ELLVSQPDNGEQALEIMELLVRSGAIDVVVVDSVAALTPR 150 (268) T ss_dssp HHTTCCEEEEESSCCCCHHHHHHTTCCGG-----------GCEEECCSSHHHHHHHHHHHHTTTCCSEEEEECTTTCCCS T ss_pred HHCCCCEEEEECCCCCHHHHHHHHCCCHH-----------HHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEH T ss_conf 72378489996588706899998425843-----------6220057887899999999986267632442103430002 Q ss_pred EEEECCEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEC Q ss_conf 799712100015887667899999999999860946888512 Q Ver_Hs_NP_0570 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSK 222 (351) Q Consensus 181 lvIVg~KYD~F~~~D~e~rK~i~r~LR~iAH~yGA~L~FtSk 222 (351) .-+.+..-+.-.....+...-+.+.|+.+|+.|+..++++++ T Consensus 151 ~~~~~~~~~~~~~~~~~~i~~~~~~L~~lA~~~ni~Vi~~nQ 192 (268) T d1xp8a1 151 AEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAAIFINQ 192 (268) T ss_dssp TTC--------CCHHHHHHHHHHHHHHHHHTTTCCEEEEEEE T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC T ss_conf 342100002357899999999999999999861988999703 No 85 >d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=81.95 E-value=2 Score=19.32 Aligned_columns=155 Identities=14% Q ss_pred CEEEEEECCCCCHHHHHHHHC-----CCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEE-------------EEECCCCCH Q ss_conf 458998659886377777552-----76678887531000221110157871117888-------------971578542 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTIILRCL-----DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHF-------------WELGGGTSL 93 (351) Q Consensus 32 k~v~~vGsk~~GKTTli~Rfl-----~r~e~~KPTlALeYtygRra~~~~~~KdvaH~-------------WELGgg~~l 93 (351) |+|-++|--++|||||+.+.+ -.......+..+||-.--+.+|-...-..+++ ++.-+-..+ T Consensus 18 RNI~IiGHvdhGKTTL~d~Ll~~~g~i~~~~~g~~r~~D~~~dE~eRgITikss~isl~~~~~~~~~~~~~~~~~~~~~l 97 (341) T d1n0ua2 18 RNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVKEIKQKTDGNSFL 97 (341) T ss_dssp EEEEEECCGGGTHHHHHHHHHHHHBCCBC------------------CCCBCCCEEEEEEECCHHHHHHCSSCCCSSEEE T ss_pred CEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCE T ss_conf 15899942598878999999998265312334310002563457762860654589997447643210000012467606 Q ss_pred HHCEEEE---------ECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHH---------HHHHHHHHHHHCCCHHHHHH Q ss_conf 0211000---------04235120677888736984689999999999999---------99999999985269537899 Q Ver_Hs_NP_0570 94 LDLISIP---------ITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATK---------SHVDKVIMKLGKTNAKAVSE 155 (351) Q Consensus 94 s~Li~ip---------it~~~l~~~~viivlDlSkP~~lw~tle~~l~~vr---------~~v~kl~~~l~k~~~~~~~~ 155 (351) --+|+.| +++-.+-+ .++||+|... ...-.|.+.|-++.. ..+|+++.+++-....+-.+ T Consensus 98 InlIDTPGH~dF~~ev~~alr~~D-gaiLVVDa~e-Gv~~qT~~vl~~a~~~~ip~iivINKiDrli~El~l~p~e~y~~ 175 (341) T d1n0ua2 98 INLIDSPGHVDFSSEVTAALRVTD-GALVVVDTIE-GVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQT 175 (341) T ss_dssp EEEECCCCCCSSCHHHHHHHHTCS-EEEEEEETTT-BSCHHHHHHHHHHHHTTCEEEEEEECHHHHHHTSCCCHHHHHHH T ss_pred EEEEECCCHHHHHHHHHHHHHHHC-CEEEEEECCC-CCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCHHHHHHH T ss_conf 999747865678999999988606-1689897788-98603699999999747978999864103544147998999999 Q ss_pred HHHHHHH------HCCCCCCCCCCCCCCCCCEEEECCEE Q ss_conf 9999998------41466776001110688779971210 Q Ver_Hs_NP_0570 156 MRQKIWN------NMPKDHPDHELIDPFPVPLVIIGSKY 188 (351) Q Consensus 156 l~qra~~------~~~~dhpD~~~v~p~piPlvIVg~KY 188 (351) ++.-..+ ....+.-+...+.|..=-+++-.+++ T Consensus 176 l~~iie~vN~~i~~~~~~~~~~~~~~p~~gnV~F~S~~~ 214 (341) T d1n0ua2 176 FARTVESVNVIVSTYADEVLGDVQVYPARGTVAFGSGLH 214 (341) T ss_dssp HHHHHHHHHHHHHHHSCGGGCCCCCCGGGTCEEEEETTT T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEECCCCC T ss_conf 999999999998731675557427854688565300025 No 86 >d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)} Probab=80.88 E-value=0.32 Score=24.24 Aligned_columns=24 Identities=17% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCC Q ss_conf 745899865988637777755276 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDR 54 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r 54 (351) ++.|.|.|-.||||||++.+..++ T Consensus 3 g~lI~i~G~~GsGKsT~~~~L~~~ 26 (209) T d1nn5a_ 3 GALIVLEGVDRAGKSTQSRKLVEA 26 (209) T ss_dssp CCEEEEEESTTSSHHHHHHHHHHH T ss_pred CEEEEEECCCCCCHHHHHHHHHHH T ss_conf 607898768999878999999998 No 87 >d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus)} Probab=80.46 E-value=0.47 Score=23.26 Aligned_columns=27 Identities=22% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCC Q ss_conf 7458998659886377777552766788 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPP 58 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~ 58 (351) +..+-++|-.|||||||+ |.+.+.-.| T Consensus 62 Ge~v~IiG~nGsGKSTLl-~~l~Gl~~~ 88 (281) T d1r0wa_ 62 GEMLAITGSTGSGKTSLL-MLILGELEA 88 (281) T ss_dssp TCEEEEEESTTSSHHHHH-HHHHTSSCC T ss_pred CCEEEEECCCCCCHHHHH-HHHHCCCCC T ss_conf 858999738999789999-998401474 No 88 >d1ak2_1 c.37.1.1 (14-146,177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2} Probab=80.39 E-value=0.3 Score=24.44 Aligned_columns=24 Identities=17% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCC Q ss_conf 745899865988637777755276 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDR 54 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r 54 (351) +.+++++|-.||||||+.....++ T Consensus 3 g~~Ivl~G~~GsGKsT~~~~La~~ 26 (190) T d1ak2_1 3 GVRAVLLGPPGAGKGTQAPKLAKN 26 (190) T ss_dssp CCEEEEECCTTSSHHHHHHHHHHH T ss_pred CCEEEEECCCCCCHHHHHHHHHHH T ss_conf 617888758999878899999997 No 89 >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni} Probab=80.35 E-value=0.29 Score=24.52 Aligned_columns=16 Identities=44% Q ss_pred CEEEEEECCCCCHHHH Q ss_conf 4589986598863777 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTI 47 (351) Q Consensus 32 k~v~~vGsk~~GKTTl 47 (351) |+++++|-.|+||||+ T Consensus 1 k~I~l~G~~GsGKtTi 16 (161) T d1viaa_ 1 KNIVFIGFMGSGKSTL 16 (161) T ss_dssp CCEEEECCTTSCHHHH T ss_pred CEEEEECCCCCCHHHH T ss_conf 9488874899977789 No 90 >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli} Probab=80.26 E-value=0.29 Score=24.49 Aligned_columns=16 Identities=38% Q ss_pred CEEEEEECCCCCHHHH Q ss_conf 4589986598863777 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTI 47 (351) Q Consensus 32 k~v~~vGsk~~GKTTl 47 (351) |.+++.|-.|+||||+ T Consensus 3 k~I~l~G~~GsGKtTi 18 (169) T d1kaga_ 3 RNIFLVGPMGAGKSTI 18 (169) T ss_dssp CCEEEECCTTSCHHHH T ss_pred EEEEEECCCCCCHHHH T ss_conf 1688875899867889 No 91 >d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus} Probab=80.04 E-value=0.49 Score=23.13 Aligned_columns=28 Identities=32% Q ss_pred CCCEEEEEECCCCCHHHHHHHHCCCCCCC Q ss_conf 57458998659886377777552766788 Q Ver_Hs_NP_0570 30 AEKFVFFIGSKNGGKTTIILRCLDRDEPP 58 (351) Q Consensus 30 ~ek~v~~vGsk~~GKTTli~Rfl~r~e~~ 58 (351) .+..+.++|..|||||||+ |.+...-.| T Consensus 26 ~Gei~~i~G~nGaGKSTLl-~~i~G~~~p 53 (200) T d1sgwa_ 26 KGNVVNFHGPNGIGKTTLL-KTISTYLKP 53 (200) T ss_dssp TTCCEEEECCTTSSHHHHH-HHHTTSSCC T ss_pred CCCEEEEECCCCCCHHHHH-HHHHCCCCC T ss_conf 8818999727999779999-997327886 No 92 >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius} Probab=79.79 E-value=0.47 Score=23.26 Aligned_columns=20 Identities=25% Q ss_pred CEEEEEECCCCCHHHHHHHH Q ss_conf 45899865988637777755 Q Ver_Hs_NP_0570 32 KFVFFIGSKNGGKTTIILRC 51 (351) Q Consensus 32 k~v~~vGsk~~GKTTli~Rf 51 (351) |.+++.|-.||||||++.+. T Consensus 2 kiivi~G~~GsGKtT~~~~L 21 (194) T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKV 21 (194) T ss_dssp EEEEEEECTTSCHHHHHHHH T ss_pred EEEEEECCCCCCHHHHHHHH T ss_conf 68899758999868899999 No 93 >d1p4sa_ c.37.1.1 (A:) Adenylate kinase {Mycobacterium tuberculosis} Probab=79.66 E-value=0.25 Score=24.90 Aligned_columns=22 Identities=23% Q ss_pred EEEEEECCCCCHHHHHHHHCCC Q ss_conf 5899865988637777755276 Q Ver_Hs_NP_0570 33 FVFFIGSKNGGKTTIILRCLDR 54 (351) Q Consensus 33 ~v~~vGsk~~GKTTli~Rfl~r 54 (351) .|++.|-.|+||||+..+..++ T Consensus 2 ~Ivl~G~~GsGKTTia~~L~~~ 23 (181) T d1p4sa_ 2 RVLLLGPPGAGKGTQAVKLAEK 23 (181) T ss_dssp CEEEECSSSSCSHHHHHHHHHH T ss_pred EEEEECCCCCCHHHHHHHHHHH T ss_conf 6788748999868899999997 No 94 >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae} Probab=78.71 E-value=0.33 Score=24.18 Aligned_columns=95 Identities=20% Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHCCCCCCC---------------------- Q ss_conf 9874188999987652257666110111257458998659886377777552766788---------------------- Q Ver_Hs_NP_0570 1 MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPP---------------------- 58 (351) Q Consensus 1 ~~~~~lw~~~~~ev~~~~~~~~~~~~~~~~ek~v~~vGsk~~GKTTli~Rfl~r~e~~---------------------- 58 (351) ++.+.+=++..+-...+.. |+|.|.-||||||++.-++.....+ T Consensus 142 ~~~~~~~~l~~~~~~~~Gl--------------ilisG~tgSGKTT~l~a~l~~~~~~~~~i~tiEdp~E~~~~~~~q~~ 207 (401) T d1p9ra_ 142 MTAHNHDNFRRLIKRPHGI--------------ILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPIEFDIDGIGQTQ 207 (401) T ss_dssp CCHHHHHHHHHHHTSSSEE--------------EEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSCCSCCSSSEEEE T ss_pred CCHHHHHHHHHHHHCCCCE--------------EEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEE T ss_conf 8889999999999604888--------------99971788646899999999608888779996355231479961477 Q ss_pred -CCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCHHHCEEEEECCCCCCEEE Q ss_conf -8753100022111015787111788897157854202110000423512067 Q Ver_Hs_NP_0570 59 -KPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFS 110 (351) Q Consensus 59 -KPTlALeYtygRra~~~~~~KdvaH~WELGgg~~ls~Li~ipit~~~l~~~~ 110 (351) .+....+|.-+=++.-..+| ||.=|=|+-+...+.-.++..+|.+.+-+.. T Consensus 208 v~~~~~~~~~~~l~~~LR~dP-Dvi~vGEiRd~eta~~a~~aa~tGh~v~tTl 259 (401) T d1p9ra_ 208 VNPRVDMTFARGLRAILRQDP-DVVMVGEIRDLETAQIAVQASLTGHLVMSTL 259 (401) T ss_dssp CBGGGTBCHHHHHHHHGGGCC-SEEEESCCCSHHHHHHHHHHHHTTCEEEEEE T ss_pred ECCCCCCHHHHHHHHHHHCCC-CEEEECCCCCHHHHHHHHHHHHCCCCEEEEE T ss_conf 147787308999999984289-8899869998889999999982698247766 No 95 >d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli} Probab=78.60 E-value=0.44 Score=23.39 Aligned_columns=29 Identities=24% Q ss_pred EEEEECCCCCHHHHHHHHCCCCCCCCCCC Q ss_conf 89986598863777775527667888753 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDRDEPPKPTL 62 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r~e~~KPTl 62 (351) +++.|--||||||++.+.+.+..-.|..+ T Consensus 6 ~ii~GflGsGKTTll~~ll~~~~g~kv~V 34 (222) T d1nija1 6 TLLTGFLGAGKTTLLRHILNEQHGYKIAV 34 (222) T ss_dssp EEEEESSSSSCHHHHHHHHHSCCCCCEEE T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCEEE T ss_conf 99867889877899999998517995799 No 96 >d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis} Probab=78.52 E-value=0.59 Score=22.62 Aligned_columns=27 Identities=37% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCC Q ss_conf 7458998659886377777552766788 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPP 58 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~ 58 (351) ...+-++|..|||||||+ +.+.+-..| T Consensus 28 Ge~v~iiG~nGsGKSTLl-~~l~g~~~~ 54 (242) T d1mv5a_ 28 NSIIAFAGPSGGGKSTIF-SLLERFYQP 54 (242) T ss_dssp TEEEEEECCTTSSHHHHH-HHHTTSSCC T ss_pred CCEEEEECCCCCCHHHHH-HHHHHHHCC T ss_conf 848999717999789999-999886306 No 97 >d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae)} Probab=77.74 E-value=0.66 Score=22.33 Aligned_columns=21 Identities=29% Q ss_pred CCEEEEEECCCCCHHHHHHHH Q ss_conf 745899865988637777755 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRC 51 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rf 51 (351) ++.+.+.|..||||||+.... T Consensus 3 g~lI~i~G~~GsGKsT~~~~L 23 (214) T d1tmka_ 3 GKLILIEGLDRTGKTTQCNIL 23 (214) T ss_dssp CCEEEEEESTTSSHHHHHHHH T ss_pred EEEEEEECCCCCCHHHHHHHH T ss_conf 068998768898878999999 No 98 >d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139} Probab=77.42 E-value=0.71 Score=22.13 Aligned_columns=27 Identities=30% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCC Q ss_conf 7458998659886377777552766788 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPP 58 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~ 58 (351) +..+-++|..|||||||+ |.+.+...| T Consensus 32 Gei~~liG~nGaGKSTll-~~i~G~~~p 58 (240) T d1ji0a_ 32 GQIVTLIGANGAGKTTTL-SAIAGLVRA 58 (240) T ss_dssp TCEEEEECSTTSSHHHHH-HHHTTSSCC T ss_pred CEEEEEECCCCCCHHHHH-HHHHHCCCC T ss_conf 618999737999789999-999721576 No 99 >d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens)} Probab=77.36 E-value=0.64 Score=22.39 Aligned_columns=21 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHCCC Q ss_conf 899865988637777755276 Q Ver_Hs_NP_0570 34 VFFIGSKNGGKTTIILRCLDR 54 (351) Q Consensus 34 v~~vGsk~~GKTTli~Rfl~r 54 (351) |-++|.-++|||||+|+.+++ T Consensus 35 VsV~G~~~sGKS~LlN~L~g~ 55 (277) T d1f5na2 35 VAIVGLYRTGKSYLMNKLAGK 55 (277) T ss_dssp EEEEEBTTSSHHHHHHHHTTC T ss_pred EEEEECCCCCHHHHHHHHHCC T ss_conf 997608998579999988465 No 100 >d1pf4a1 c.37.1.12 (A:321-564) Multidrug resistance ABC transporter MsbA, C-terminal domain {Vibrio cholerae} Probab=77.26 E-value=0.25 Score=24.96 Aligned_columns=27 Identities=30% Q ss_pred CCEEEEEECCCCCHHHHHHHHCCCCCCC Q ss_conf 7458998659886377777552766788 Q Ver_Hs_NP_0570 31 EKFVFFIGSKNGGKTTIILRCLDRDEPP 58 (351) Q Consensus 31 ek~v~~vGsk~~GKTTli~Rfl~r~e~~ 58 (351) ...+.++|..|||||||+ +.+.+-..| T Consensus 49 Ge~~~i~G~sGsGKSTLl-~~l~G~~~p 75 (244) T d1pf4a1 49 GKTVALVGRSGSGKSTIA-NLFTRFYDV 75 (244) T ss_dssp TCCCCCCCSCSSHHHHHH-HHTSSSSCC T ss_pred CCEEEEECCCCCCHHHHH-HHHHHHCCC T ss_conf 848999848998789999-998741584 Done!