Score E
Sequences producing significant alignments: (bits) Value
ugc|Hs.91579.3|Hs.91579 92.3 1117 444 1 960 GENE= PROTSIM=PID:... 230 1e-60
ugc|Hs.91579.1|Hs.91579 50.4 715 432 7 565 GENE= PROTSIM=PID:g... 139 3e-33
ugc|Hs.287863.1|Hs.287863 195.7 1069 151 2 1045 GENE= PROTSIM=... 116 2e-26
ugc|Hs.91579.2|Hs.91579 8.2 191 176 3 134 GENE= PROTSIM=PID:g3... 45 8e-05
ugc|Hs.82276.1|Hs.82276 225.5 8884 932 92 6035 GENE=THH PROTSI... 34 0.15
ugc|Hs.169750.2|Hs.169750 369.1 8379 209 45 7348 GENE=TPR PROT... 32 0.56
ugc|Hs.146388.2|Hs.146388 150.7 1783 395 2863 5818 GENE=MAP7 P... 32 0.56
ugc|Hs.146388.1|Hs.146388 115.8 1537 483 1 1962 GENE=MAP7 PROT... 32 0.56
ugc|Hs.132942.4|Hs.132942 196.7 3038 425 16 3099 GENE=KIAA0621... 32 0.74
ugc|Hs.132942.1|Hs.132942 224.1 2745 292 10 2280 GENE=KIAA0621... 32 0.74
ugc|Hs.18368.3|Hs.18368 180.9 690 113 5 527 GENE=DKFZP564B0769... 32 0.74
ugc|Hs.75445.1|Hs.75445 155.1 1250 265 440 1590 GENE=SPARCL1 P... 31 0.97
ugc|Hs.170204.2|Hs.170204 234.7 4358 417 7 4355 GENE=KIAA0551 ... 31 1.3
ugc|Hs.169688.1|Hs.169688 41.5 1054 696 38 974 GENE= PROTSIM= ... 31 1.3
ugc|Hs.19575.6|Hs.19575 187.8 1884 288 6 1814 GENE=LOC51606 PR... 31 1.3
ugc|Hs.14512.1|Hs.14512 149.5 1463 328 99 1558 GENE=HSA249128 ... 31 1.3
ugc|Hs.287611.1|Hs.287611 123.4 1388 404 20 1379 GENE= PROTSIM... 31 1.7
ugc|Hs.172004.11|Hs.172004 304.0 13607 651 7 13949 GENE=TTN PR... 31 1.7
ugc|Hs.95631.1|Hs.95631 216.6 1361 156 17 1946 GENE= PROTSIM= ... 31 1.7
ugc|Hs.171814.4|Hs.171814 6.4 867 813 30 729 GENE=PTMS PROTSIM... 30 2.2
ugc|Hs.171814.3|Hs.171814 93.8 708 277 12 420 GENE=PTMS PROTSI... 30 2.2
ugc|Hs.171814.1|Hs.171814 40.4 731 488 10 391 GENE=PTMS PROTSI... 30 2.2
ugc|Hs.182183.10|Hs.182183 289.7 3335 184 40 2694 GENE=CALD1 P... 30 2.9
ugc|Hs.26584.1|Hs.26584 227.7 3800 390 16 3932 GENE=DIAPH1 PRO... 29 3.7
ugc|Hs.18895.1|Hs.18895 231.3 1799 178 40 2382 GENE=TLK1 PROTS... 29 3.7
ugc|Hs.169470.4|Hs.169470 373.9 11434 272 3 11474 GENE=DMD PRO... 29 4.9
ugc|Hs.169470.2|Hs.169470 315.4 4778 204 3 4442 GENE=DMD PROTS... 29 4.9
ugc|Hs.169470.1|Hs.169470 374.2 11436 271 3 11392 GENE=DMD PRO... 29 4.9
ugc|Hs.79706.2|Hs.79706 184.6 28896 4562 25 13780 GENE=PLEC1 P... 29 4.9
ugc|Hs.58609.2|Hs.58609 190.6 915 136 25 1039 GENE= PROTSIM= E... 29 4.9
ugc|Hs.21343.2|Hs.21343 55.0 3568 2059 1 3422 GENE=KIAA0819 PR... 29 4.9
ugc|Hs.620.1|Hs.620 355.0 7725 222 1 8073 GENE=BPAG1 PROTSIM=P... 29 4.9
ugc|Hs.116885.1|Hs.116885 115.2 601 190 22 574 GENE= PROTSIM=P... 29 6.4
ugc|Hs.44836.1|Hs.44836 107.9 3959 1346 4 2761 GENE=INCENP PRO... 29 6.4
ugc|Hs.16364.1|Hs.16364 164.3 1650 319 141 2084 GENE=FLJ10955 ... 29 6.4
ugc|Hs.241405.1|Hs.241405 165.8 2273 433 22 1553 GENE= PROTSIM... 28 8.4
ugc|Hs.204166.2|Hs.204166 66.6 2070 1063 32 1640 GENE= PROTSIM... 28 8.4
>ugc|Hs.91579.3|Hs.91579 92.3 1117 444 1 960 GENE=
PROTSIM=PID:g3881873 Homo sapiens clone 23783 mRNA
sequence; translated
Length = 317
Score = 230 bits (580), Expect = 1e-60
Identities = 136/296 (45%), Positives = 182/296 (60%), Gaps = 8/296 (2%)
Query: 1 MLRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDE-SLQKDFRYD 59
MLRR+AR RREYLYRKA+E ++++ +++AL + + +P E AE +LQ +D
Sbjct: 21 MLRREARLRREYLYRKAREEAQRLSPERKERLRRALEENRLIPTEYAERALALQGSLEFD 80
Query: 60 Q-SLKESEEADDLQVDDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLN 118
+K + + VDDEY DP+ RDPS+RL FAKE+KL+FP A R+N
Sbjct: 81 DVEVKVTIQGVTSHVDDEYDGQES-RDPKGYDHYLRDPSSRLKMFAKELKLVFPGAQRMN 139
Query: 119 RGNYVMPNL-VDACKKSGTTD-LVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDI 176
RG + K +G L+V+HEHRG P L +SH P GPTA F+L NVV+
Sbjct: 140 RGRHECGGTGAKPAKPNGVNPILLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVIGMTS 199
Query: 177 INAGNQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSERVITFANRGDFISVRQH 236
G SE PHLI F++ LGKRV IL++LF PK DS RVITFAN+ D+IS R H
Sbjct: 200 QTWGTMSEAKPHLITHGFSSRLGKRVSDILRYLFPV-PKDDSHRVITFANQDDYISFRHH 258
Query: 237 VYVRT-REGVEIAEVGPRFEMRLFELRLGTLENK-DADVEWQLRRFIRTANKKDYL 290
VY +T VE+ EVGPRFE++L+ +RLGTLE + ADVEW+ + TA K+ +L
Sbjct: 259 VYKKTDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKRVFL 314
>ugc|Hs.91579.1|Hs.91579 50.4 715 432 7 565 GENE=
PROTSIM=PID:g3881873 Homo sapiens clone 23783 mRNA
sequence; minus strand; translated
Length = 187
Score = 139 bits (346), Expect = 3e-33
Identities = 84/185 (45%), Positives = 109/185 (58%), Gaps = 25/185 (13%)
Query: 130 ACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDIINAGNQSEVNPHL 189
ACK +G TDL+V+HEHRG L +SH P GPTA F+L NVVMRHDI + G SE PHL
Sbjct: 1 ACKATGVTDLLVVHEHRGTLVGLIVSHLPFGPTAYFTLCNVVMRHDIQDLGTMSEAKPHL 60
Query: 190 IFDNFTTALGKRVVCILKHLFNAGPKKDSERVITFANRGDFISVRQHVYVRTREGVE--- 246
I F++ LGKRV IL++LF PK DS RVITFAN+ D+IS R R ++G+
Sbjct: 61 ITHGFSSRLGKRVSDILRYLFPV-PKDDSHRVITFANQDDYISFRWVHGPRPKKGIPPLV 119
Query: 247 ---IAEVGPR-FEMR----------------LFELRLGTLENK-DADVEWQLRRFIRTAN 285
+ V P+ F R ++ +RLGTLE + ADVEW+ + TA
Sbjct: 120 YLVLLAVDPQLFPPRHHVYKKTDHRNVELTXVYMIRLGTLEQEATADVEWRWHPYTNTAR 179
Query: 286 KKDYL 290
K+ +L
Sbjct: 180 KRVFL 184
>ugc|Hs.287863.1|Hs.287863 195.7 1069 151 2 1045 GENE=
PROTSIM=PID:g3874412 Homo sapiens cDNA FLJ12475 fis,
clone NT2RM1000962; translated
Length = 348
Score = 116 bits (289), Expect = 2e-26
Identities = 79/277 (28%), Positives = 141/277 (50%), Gaps = 11/277 (3%)
Query: 7 RERREYLY-RKAQELQDSQLQQKRQIIKQALAQG-----KPLPKELAEDESLQKDFRYDQ 60
++RR ++ R Q+ + +L K+++ K+ A G KP+PK + +++ + + D
Sbjct: 67 KQRRHLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTI-DNQRVYDETTVDP 125
Query: 61 SLKESEEADDLQVDDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNRG 120
+ + E A D D+ + + P+I++TTS P R + +++ + PN+ R
Sbjct: 126 N--DEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRR 183
Query: 121 NYVMPNLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDIINAG 180
+ ++ C TDL+V++E R P L +SH P+GPTA F + +V +R +I G
Sbjct: 184 GLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRG 243
Query: 181 -NQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSERVITFANRG-DFISVRQHVY 238
+ +E P +I +NFTT LG + + LF P+ R+ G + S Y
Sbjct: 244 KDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRRLPHSTINGITYSSDFTDTY 303
Query: 239 VRTREGVEIAEVGPRFEMRLFELRLGTLENKDADVEW 275
+ + V I E+GPRF ++L L+ GT ++K + EW
Sbjct: 304 SXSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEW 340
>ugc|Hs.91579.2|Hs.91579 8.2 191 176 3 134 GENE=
PROTSIM=PID:g3881873 Homo sapiens clone 23783 mRNA
sequence; minus strand; translated
Length = 44
Score = 44.9 bits (104), Expect = 8e-05
Identities = 24/41 (58%), Positives = 28/41 (67%), Gaps = 1/41 (2%)
Query: 184 EVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSERVITF 224
E PHLI F++ LGKRV IL++LF PK DS RVITF
Sbjct: 1 EAKPHLITHGFSSRLGKRVSDILRYLFPV-PKDDSHRVITF 40
>ugc|Hs.82276.1|Hs.82276 225.5 8884 932 92 6035 GENE=THH
PROTSIM=PID:g868224 trichohyalin; translated
Length = 1981
Score = 34.0 bits (76), Expect = 0.15
Identities = 17/66 (25%), Positives = 38/66 (56%)
Query: 2 LRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQS 61
L+R+ ERR++L R+ + + Q ++K+Q+ + + + +L E+E ++ R +Q
Sbjct: 513 LKREQEERRDWLKREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQ 572
Query: 62 LKESEE 67
L+ +E
Sbjct: 573 LRREQE 578
Score = 32.1 bits (71), Expect = 0.56
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 4 RQARERREYLYRKAQELQDSQLQQKRQIIKQ----ALAQGKPLPKELAEDESLQKDFRYD 59
++ R+R L ++ ++LQ+ + Q++R++ ++ + + L +E E+E Q+ R +
Sbjct: 291 KEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRRE 350
Query: 60 QSLKESEEADDLQVDDE 76
Q L+ +E + + +E
Sbjct: 351 QQLRRKQEEERREQQEE 367
Score = 32.1 bits (71), Expect = 0.56
Identities = 19/66 (28%), Positives = 34/66 (50%), Gaps = 11/66 (16%)
Query: 2 LRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQS 61
L+ + ERRE R+ Q+L+ Q +++ Q +K+ E+E LQ+ R +Q
Sbjct: 555 LKLEEEERREQQERREQQLRREQEERREQRLKRQ-----------EEEERLQQRLRSEQQ 603
Query: 62 LKESEE 67
L+ +E
Sbjct: 604 LRREQE 609
Score = 31.3 bits (69), Expect = 0.97
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 2 LRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQS 61
L R+ RE+R R+ Q ++ +LQQ+ + Q L + +E + L++ +R ++
Sbjct: 1097 LLREEREKRRLQERERQYREEEELQQEEE---QLLGE----ERETRRRQELERQYRKEEE 1149
Query: 62 LKESEE 67
L++ EE
Sbjct: 1150 LQQEEE 1155
Score = 31.3 bits (69), Expect = 0.97
Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 3 RRQARERREYLYRKAQEL-QDSQLQQKRQIIK-QALAQGKPLPKE--LAEDESLQKD--F 56
R Q ERRE R+ Q+L ++ QL++++Q+ + Q L + + L +E L ++ L+++
Sbjct: 426 REQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQL 485
Query: 57 RYDQSLKESEEAD 69
R +Q L+ +E +
Sbjct: 486 RREQQLRREQEEE 498
Score = 30.9 bits (68), Expect = 1.3
Identities = 23/86 (26%), Positives = 45/86 (51%), Gaps = 6/86 (6%)
Query: 3 RRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSL 62
RRQ RER+ R+ +ELQ + Q R+ ++ + + L ++ E+E LQ+ R Q
Sbjct: 1166 RRQERERQ---CREEEELQQEEEQLLRE--EREKRRRQELERQYREEEELQRQKR-KQRY 1219
Query: 63 KESEEADDLQVDDEYAATSGIMDPRI 88
++ ++ DL+ E + + D ++
Sbjct: 1220 RDEDQRSDLKWQWEPEKENAVRDNKV 1245
Score = 30.5 bits (67), Expect = 1.7
Identities = 24/76 (31%), Positives = 42/76 (54%), Gaps = 10/76 (13%)
Query: 2 LRRQARERREYLYRKAQEL-QDSQLQQKRQIIK-------QALAQGKPLPKELAEDESLQ 53
LRR+ + RRE R+ Q+L ++ QL++++Q+ + Q L + + L +E E+ Q
Sbjct: 443 LRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQ 502
Query: 54 K--DFRYDQSLKESEE 67
K R +Q LK +E
Sbjct: 503 KHEQERREQRLKREQE 518
Score = 30.5 bits (67), Expect = 1.7
Identities = 19/66 (28%), Positives = 37/66 (55%), Gaps = 3/66 (4%)
Query: 2 LRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQS 61
LRR+ ERRE R+ QE + + Q +R+ ++ + + L +E E+E ++ R +Q
Sbjct: 386 LRREQEERREQQLRREQEEERREQQLRRE--QEEERREQQLRRE-QEEERREQQLRREQQ 442
Query: 62 LKESEE 67
L+ ++
Sbjct: 443 LRREQQ 448
Score = 30.1 bits (66), Expect = 2.2
Identities = 20/69 (28%), Positives = 41/69 (58%), Gaps = 7/69 (10%)
Query: 2 LRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQS 61
L+R+ ERR+ L ++ +E + +L+++++ + L Q L +E E E L+++ R D+
Sbjct: 633 LKREQEERRDQLLKREEERRQQRLKREQE---ERLEQ--RLKRE--EVERLEQEERRDER 685
Query: 62 LKESEEADD 70
LK E ++
Sbjct: 686 LKREEPEEE 694
Score = 30.1 bits (66), Expect = 2.2
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 2 LRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQS 61
LR + R++RE + +E ++ + +Q+R+ K+ + L E+E LQ+ R Q
Sbjct: 863 LRAEERQQREQRFLPEEEEKEQRGRQRREREKEL--------QFLEEEEQLQRRERAQQL 914
Query: 62 LKESEEADDLQVDDE 76
EE D LQ D E
Sbjct: 915 ---QEEEDGLQEDQE 926
Score = 30.1 bits (66), Expect = 2.2
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 2 LRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQS 61
L R+ RE+R R+ Q +D +LQQK + Q L + E + +K +R ++
Sbjct: 1007 LLREEREKRRRQERERQYRKDKKLQQKEE---QLLGE----EPEKRRRQEREKKYREEEE 1059
Query: 62 LKESEE 67
L++ EE
Sbjct: 1060 LQQEEE 1065
Score = 29.7 bits (65), Expect = 2.9
Identities = 17/67 (25%), Positives = 37/67 (54%), Gaps = 9/67 (13%)
Query: 2 LRRQARERREYLYRKAQELQDSQLQQ-KRQIIKQALAQGKPLPKELAEDESLQKDFRYDQ 60
L+R+ RE+R ++ Q ++ QLQQ + Q++++ +E + ++ +R D+
Sbjct: 977 LQREEREKRRRQEQERQYREEEQLQQEEEQLLRE--------EREKRRRQERERQYRKDK 1028
Query: 61 SLKESEE 67
L++ EE
Sbjct: 1029 KLQQKEE 1035
Score = 29.0 bits (63), Expect = 4.9
Identities = 22/65 (33%), Positives = 36/65 (54%), Gaps = 7/65 (10%)
Query: 3 RRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSL 62
RRQ ER+ YRK +ELQ + Q R+ ++ Q + ++ E+E LQ++ +Q L
Sbjct: 1136 RRQELERQ---YRKEEELQQEEEQLLREEPEKRRRQER--ERQCREEEELQQE--EEQLL 1188
Query: 63 KESEE 67
+E E
Sbjct: 1189 REERE 1193
Score = 28.6 bits (62), Expect = 6.4
Identities = 22/82 (26%), Positives = 42/82 (50%), Gaps = 9/82 (10%)
Query: 4 RQARERREYLYRKAQELQDSQLQQKRQIIKQALAQG-----KPLPKELAEDESLQKDFRY 58
++ R+ RE YR+ +ELQ + Q R+ ++ Q + + E+E L ++ R
Sbjct: 1044 KRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREERE 1103
Query: 59 DQSLKESE----EADDLQVDDE 76
+ L+E E E ++LQ ++E
Sbjct: 1104 KRRLQERERQYREEEELQQEEE 1125
>ugc|Hs.169750.2|Hs.169750 369.1 8379 209 45 7348 GENE=TPR
PROTSIM=PID:g733567 translocated promoter region (to
activated MET oncogene); minus strand; translated
Length = 2433
Score = 32.1 bits (71), Expect = 0.56
Identities = 43/181 (23%), Positives = 71/181 (38%), Gaps = 50/181 (27%)
Query: 3 RRQARERREYLYRKAQELQDS--QLQQKRQIIKQALAQGKPLPKEL-------------- 46
R + R+R E L R+ QELQDS ++K Q+ + +AQ + L K+
Sbjct: 1315 RLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLR 1374
Query: 47 AEDESLQKDFRYDQSLKESEEADDLQVDD---EYAATSGIMDP----------------R 87
E E L++D + Q+ E D L + + E + SG++ +
Sbjct: 1375 EEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKKLLEEDVNVGKARNQ 1434
Query: 88 IIVTTSRDPST---------------RLSQFAKEIKLLFPNAVRLNRGNYVMPNLVDACK 132
+V+ +DP T R+ Q +EI L R N NL+ + K
Sbjct: 1435 HLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLK 1494
Query: 133 K 133
+
Sbjct: 1495 E 1495
>ugc|Hs.146388.2|Hs.146388 150.7 1783 395 2863 5818 GENE=MAP7
PROTSIM=PID:g3874241 microtubule-associated protein 7;
translated
Length = 982
Score = 32.1 bits (71), Expect = 0.56
Identities = 27/88 (30%), Positives = 46/88 (51%), Gaps = 13/88 (14%)
Query: 3 RRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKE-----------LAEDES 51
RR ARE+RE R+ +E Q+ +QKR+ + Q +A+ + +E ++E
Sbjct: 721 RRLAREQREKEERERRE-QEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQ 779
Query: 52 LQKDFRYDQSLKESEEADDLQVDDEYAA 79
LQ+ +++L+E EEA+ Q E A
Sbjct: 780 LQRQAE-ERALREREEAERAQRQKEEEA 806
>ugc|Hs.146388.1|Hs.146388 115.8 1537 483 1 1962 GENE=MAP7
PROTSIM=PID:g3874241 microtubule-associated protein 7;
translated
Length = 653
Score = 32.1 bits (71), Expect = 0.56
Identities = 27/88 (30%), Positives = 46/88 (51%), Gaps = 13/88 (14%)
Query: 3 RRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKE-----------LAEDES 51
RR ARE+RE R+ +E Q+ +QKR+ + Q +A+ + +E ++E
Sbjct: 392 RRLAREQREKEERERRE-QEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQ 450
Query: 52 LQKDFRYDQSLKESEEADDLQVDDEYAA 79
LQ+ +++L+E EEA+ Q E A
Sbjct: 451 LQRQAE-ERALREREEAERAQRQKEEEA 477
>ugc|Hs.132942.4|Hs.132942 196.7 3038 425 16 3099 GENE=KIAA0621
PROTSIM=PID:g5081652 GTPase regulator associated with
the focal adhesion kinase pp125(FAK); KIAA0621 protein;
minus strand; translated
Length = 1026
Score = 31.7 bits (70), Expect = 0.74
Identities = 18/94 (19%), Positives = 41/94 (43%)
Query: 14 YRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESEEADDLQV 73
+R+ + +++L + + IK+ + GK L L S ++ F + + + D +
Sbjct: 154 FRETLKSHEAELDKTNKFIKELIKDGKSLISALKNLSSAKRKFADSLNEFKFQCIGDAET 213
Query: 74 DDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEI 107
DDE + + ++ D R+ + A E+
Sbjct: 214 DDEMCIARSLQEFATVLRNLEDERIRMIENASEV 247
>ugc|Hs.132942.1|Hs.132942 224.1 2745 292 10 2280 GENE=KIAA0621
PROTSIM=PID:g5081652 GTPase regulator associated with
the focal adhesion kinase pp125(FAK); KIAA0621 protein;
translated
Length = 756
Score = 31.7 bits (70), Expect = 0.74
Identities = 18/94 (19%), Positives = 41/94 (43%)
Query: 14 YRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESEEADDLQV 73
+R+ + +++L + + IK+ + GK L L S ++ F + + + D +
Sbjct: 15 FRETLKSHEAELDKTNKFIKELIKDGKSLISALKNLSSAKRKFADSLNEFKFQCIGDAET 74
Query: 74 DDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEI 107
DDE + + ++ D R+ + A E+
Sbjct: 75 DDEMCIARSLQEFATVLRNLEDERIRMIENASEV 108
>ugc|Hs.18368.3|Hs.18368 180.9 690 113 5 527 GENE=DKFZP564B0769
PROTSIM=PIR:T12483 DKFZP564B0769 protein; minus strand;
translated
Length = 174
Score = 31.7 bits (70), Expect = 0.74
Identities = 26/91 (28%), Positives = 51/91 (55%), Gaps = 16/91 (17%)
Query: 2 LRRQARERREYLYRKAQE---LQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRY 58
LR + R++RE +RK +E L D Q+++++Q Q + + KE+ +E + K+ +
Sbjct: 94 LRHRIRQKREAFWRKEKEQQLLHDKQMEEEKQ-------QTERVTKEM--NEFIHKE-QN 143
Query: 59 DQSLKESEEADDLQVDDEYAA---TSGIMDP 86
SL E+ EAD V+++ T+ +++P
Sbjct: 144 SLSLLEAREADGDVVNEKKRTPNETTSVLEP 174
>ugc|Hs.75445.1|Hs.75445 155.1 1250 265 440 1590 GENE=SPARCL1
PROTSIM=PID:g2662559 SPARC-like 1 (mast9, hevin);
translated
Length = 383
Score = 31.3 bits (69), Expect = 0.97
Identities = 22/66 (33%), Positives = 33/66 (49%), Gaps = 15/66 (22%)
Query: 21 QDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESEEAD-DLQVDDEYAA 79
+ S L+ K + +Q+ QGK +EL LK+ E++D DL V+ EYA
Sbjct: 63 KSSVLKSKEESHEQSAEQGKSSSQELG--------------LKDQEDSDGDLSVNLEYAP 108
Query: 80 TSGIMD 85
T G +D
Sbjct: 109 TEGTLD 114
>ugc|Hs.170204.2|Hs.170204 234.7 4358 417 7 4355 GENE=KIAA0551
PROTSIM=PID:g3881456 KIAA0551 protein; translated
Length = 1450
Score = 30.9 bits (68), Expect = 1.3
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 2 LRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQS 61
L +Q RE E+ + E Q +QK Q ++ L + + KEL + + ++ Y++
Sbjct: 371 LEQQQRENEEHKRQLLAERQKRIEEQKEQ--RRRLEEQQRREKELRKQQEREQRRHYEEQ 428
Query: 62 LKESEEADDLQVDDEY 77
++ EE + + EY
Sbjct: 429 MRREEERRRAEHEQEY 444
>ugc|Hs.169688.1|Hs.169688 41.5 1054 696 38 974 GENE= PROTSIM=
ESTs; translated
Length = 312
Score = 30.9 bits (68), Expect = 1.3
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 3 RRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDF---RYD 59
+R+ Y++R QE Q K Q I+Q Q PKE +E + +K F R D
Sbjct: 116 QRKGESDGAYIHRMQQEAQHVLFLSKNQAIRQPEVQA--APKEKSEQKKAKKAFQKRRLD 173
Query: 60 QSLKESEE--ADDLQ 72
+ ++ EE AD L+
Sbjct: 174 KVRRKKEEKAADRLE 188
>ugc|Hs.19575.6|Hs.19575 187.8 1884 288 6 1814 GENE=LOC51606
PROTSIM=PID:g4680661 CGI-11 protein; translated
Length = 602
Score = 30.9 bits (68), Expect = 1.3
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 19/162 (11%)
Query: 16 KAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESEEADDLQVDD 75
K+ E + Q I + L Q + L ++ +DE + +D ++ K E DL D
Sbjct: 395 KSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLE-KLGESVQDLSSFD 453
Query: 76 EYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNRGNY-VMPNLVDACKKS 134
EY+ S + R+ P + +F +E NAVRLN NY ++ L + S
Sbjct: 454 EYS--SELKSGRL----EWSPVHKSEKFWRE------NAVRLNEKNYELLKILTKLLEVS 501
Query: 135 GTTDLVVLHEHRGVPTSLTISHFPHGPTA--QFSLHNVVMRH 174
++ + H + H+P G Q +VM H
Sbjct: 502 DDPQVLAVAAH---DVGEYVRHYPRGKRVIEQLGGKQLVMNH 540
>ugc|Hs.14512.1|Hs.14512 149.5 1463 328 99 1558 GENE=HSA249128
PROTSIM=PID:g6688177 DIPB protein; minus strand;
translated
Length = 485
Score = 30.9 bits (68), Expect = 1.3
Identities = 16/59 (27%), Positives = 37/59 (62%)
Query: 18 QELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESEEADDLQVDDE 76
+E + +++Q+R+I +A + + + +E+ES ++ D+S +ESEE + +++DE
Sbjct: 104 KEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDE 162
>ugc|Hs.287611.1|Hs.287611 123.4 1388 404 20 1379 GENE=
PROTSIM=PID:g4204829 Homo sapiens cDNA FLJ13947 fis,
clone Y79AA1000985, highly similar to Human centrosomal
protein kendrin mRNA; translated
Length = 453
Score = 30.5 bits (67), Expect = 1.7
Identities = 24/78 (30%), Positives = 37/78 (46%), Gaps = 17/78 (21%)
Query: 1 MLRRQ-ARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKD---- 55
+LR Q ARE+ E + + +E S++++ QI+ K L ED +KD
Sbjct: 322 LLREQHAREKEEVVLSELKEKLQSEMEKNAQIV-----------KTLKEDWESEKDLCLE 370
Query: 56 -FRYDQSLKESEEADDLQ 72
R + S K E +DLQ
Sbjct: 371 NLRKELSAKHQSEMEDLQ 388
>ugc|Hs.172004.11|Hs.172004 304.0 13607 651 7 13949 GENE=TTN
PROTSIM=PID:g3881830 titin; translated
Length = 4648
Score = 30.5 bits (67), Expect = 1.7
Identities = 26/126 (20%), Positives = 53/126 (41%), Gaps = 11/126 (8%)
Query: 4 RQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLK 63
R +++ + R A+ L ++ Q+ K+AL + L K ++++ +FR + K
Sbjct: 3128 RHVQKQIDKTLRMAEILSGTESVPLTQVAKEALREAAVLYKPAVSTKTVKGEFRLEIEEK 3187
Query: 64 ESEEADDLQVDDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNRGNYV 123
+ E + D + +PR T+ + R+ QF + + + R Y
Sbjct: 3188 KEERKLRMPYD--------VPEPRKYKQTTIEEDQRIKQFVPMSDMKWYKKI---RDQYE 3236
Query: 124 MPNLVD 129
MP +D
Sbjct: 3237 MPGKLD 3242
>ugc|Hs.95631.1|Hs.95631 216.6 1361 156 17 1946 GENE= PROTSIM= Homo
sapiens cDNA: FLJ22033 fis, clone HEP08810, highly
similar to HSU43374 Human normal keratinocyte mRNA;
minus strand; translated
Length = 643
Score = 30.5 bits (67), Expect = 1.7
Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 4/115 (3%)
Query: 2 LRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQS 61
L+ +A +++ L RKA+E + L Q+ + + Q + + +EL E +D +
Sbjct: 311 LKIEAWYQKQELLRKAEETRREMLLQEEEKMIQQRQRLAAVKRELKVKEMHLQDAARRRF 370
Query: 62 LKESEEADDLQ---VDDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPN 113
LK ++ +++ +DDE + D R I T+RD R + + +L N
Sbjct: 371 LKLQQDQQEMELRRLDDEIGRKVYMRD-REIAATARDLEMRQLELESQKRLYEKN 424
>ugc|Hs.171814.4|Hs.171814 6.4 867 813 30 729 GENE=PTMS
PROTSIM=PID:g3329623 parathymosin; translated
Length = 234
Score = 30.1 bits (66), Expect = 2.2
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 AQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESEEADDLQVDDE 76
A EL L++K++ +++ A K KE+ E+E + +++ ++ EE D+ + +DE
Sbjct: 141 AAELSAKDLKEKKEKVEEK-ASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDE 199
>ugc|Hs.171814.3|Hs.171814 93.8 708 277 12 420 GENE=PTMS
PROTSIM=PID:g3329623 parathymosin; translated
Length = 136
Score = 30.1 bits (66), Expect = 2.2
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 AQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESEEADDLQVDDE 76
A EL L++K++ +++ A K KE+ E+E + +++ ++ EE D+ + +DE
Sbjct: 20 AAELSAKDLKEKKEKVEEK-ASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDE 78
>ugc|Hs.171814.1|Hs.171814 40.4 731 488 10 391 GENE=PTMS
PROTSIM=PID:g3329623 parathymosin; translated
Length = 127
Score = 30.1 bits (66), Expect = 2.2
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 17 AQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESEEADDLQVDDE 76
A EL L++K++ +++ A K KE+ E+E + +++ ++ EE D+ + +DE
Sbjct: 34 AAELSAKDLKEKKEKVEEK-ASRKERKKEVVEEEENGAEEEEEETAEDGEEEDEGEEEDE 92
>ugc|Hs.182183.10|Hs.182183 289.7 3335 184 40 2694 GENE=CALD1
PROTSIM=PID:g1049381 caldesmon 1; translated
Length = 886
Score = 29.7 bits (65), Expect = 2.9
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 5 QARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKE-------LAEDESLQKDFR 57
+A +R E L R+ E + + ++ +Q ++A + + L K+ L E+E +K
Sbjct: 601 EAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEE 660
Query: 58 YDQSLKESEEADDLQVDDE 76
D+ L+E EE L+ + E
Sbjct: 661 ADRKLREEEEKRRLKEEIE 679
>ugc|Hs.26584.1|Hs.26584 227.7 3800 390 16 3932 GENE=DIAPH1
PROTSIM=PID:g1055198 diaphanous (Drosophila, homolog) 1;
minus strand; translated
Length = 1305
Score = 29.3 bits (64), Expect = 3.7
Identities = 19/56 (33%), Positives = 31/56 (54%), Gaps = 1/56 (1%)
Query: 20 LQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESEEADDLQVDD 75
LQ + QKR+ ++ + + K L KE AE E L+K + +Q + + E D+ V D
Sbjct: 1117 LQAVKENQKRRKTEEKMRRAK-LAKEKAEKERLEKQQKREQLIDMNAEGDETGVMD 1171
>ugc|Hs.18895.1|Hs.18895 231.3 1799 178 40 2382 GENE=TLK1
PROTSIM=PID:g3873989 tousled-like kinase 1; minus
strand; translated
Length = 781
Score = 29.3 bits (64), Expect = 3.7
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 211 NAGPKKDSERVITFANRGDFISVRQHVYVRTREGVEIAEVGPRFEMRLFELRLGTLENKD 270
N+ PK+ + + A F+ + E E E+ F+LRLG L+ ++
Sbjct: 385 NSEPKQRKNKAVNGAENDPFVRPNLPQLLTLAEYHEQEEI--------FKLRLGHLKKEE 436
Query: 271 ADVEWQLRRFIRTAN 285
A+++ +L R R N
Sbjct: 437 AEIQAELERLERVRN 451
>ugc|Hs.169470.4|Hs.169470 373.9 11434 272 3 11474 GENE=DMD
PROTSIM=PID:g3876575 dystrophin (muscular dystrophy,
Duchenne and Becker types), includes DXS142, DXS164,
DXS206, DXS230, DXS239, DXS268, DXS269, DXS270, DXS272;
translated
Length = 3825
Score = 29.0 bits (63), Expect = 4.9
Identities = 25/114 (21%), Positives = 53/114 (45%), Gaps = 15/114 (13%)
Query: 7 RERREYLYRKAQELQD------SQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQ 60
R+ + L + Q L+D SQL + RQ+++Q A+ K ++ +
Sbjct: 3677 RQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPST--------- 3727
Query: 61 SLKESEEADDLQVDDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNA 114
SL+ S+ + + + + TS M +++ +D ST L + +++ FP++
Sbjct: 3728 SLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSS 3781
>ugc|Hs.169470.2|Hs.169470 315.4 4778 204 3 4442 GENE=DMD
PROTSIM=PID:g3876575 dystrophin (muscular dystrophy,
Duchenne and Becker types), includes DXS142, DXS164,
DXS206, DXS230, DXS239, DXS268, DXS269, DXS270, DXS272;
translated
Length = 1480
Score = 29.0 bits (63), Expect = 4.9
Identities = 25/114 (21%), Positives = 53/114 (45%), Gaps = 15/114 (13%)
Query: 7 RERREYLYRKAQELQD------SQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQ 60
R+ + L + Q L+D SQL + RQ+++Q A+ K ++ +
Sbjct: 1332 RQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPST--------- 1382
Query: 61 SLKESEEADDLQVDDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNA 114
SL+ S+ + + + + TS M +++ +D ST L + +++ FP++
Sbjct: 1383 SLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSS 1436
>ugc|Hs.169470.1|Hs.169470 374.2 11436 271 3 11392 GENE=DMD
PROTSIM=PID:g3876575 dystrophin (muscular dystrophy,
Duchenne and Becker types), includes DXS142, DXS164,
DXS206, DXS230, DXS239, DXS268, DXS269, DXS270, DXS272;
translated
Length = 3797
Score = 29.0 bits (63), Expect = 4.9
Identities = 25/114 (21%), Positives = 53/114 (45%), Gaps = 15/114 (13%)
Query: 7 RERREYLYRKAQELQD------SQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQ 60
R+ + L + Q L+D SQL + RQ+++Q A+ K ++ +
Sbjct: 3649 RQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPST--------- 3699
Query: 61 SLKESEEADDLQVDDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNA 114
SL+ S+ + + + + TS M +++ +D ST L + +++ FP++
Sbjct: 3700 SLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLNNSFPSS 3753
>ugc|Hs.79706.2|Hs.79706 184.6 28896 4562 25 13780 GENE=PLEC1
PROTSIM=PID:g3881533 plectin 1, intermediate filament
binding protein, 500kD; translated
Length = 4583
Score = 29.0 bits (63), Expect = 4.9
Identities = 24/81 (29%), Positives = 43/81 (52%), Gaps = 5/81 (6%)
Query: 3 RRQARERREY--LYRKAQELQDSQLQQKRQIIKQALAQGKPLPK--ELAEDESLQKDFRY 58
R QA E+ + +K QELQ + LQQ++ ++ + + + + E AE+ +Q +
Sbjct: 2081 RLQAEEKAHAFAVQQKEQELQQT-LQQEQSVLDRLRGEAEAARRAAEEAEEARVQAEREA 2139
Query: 59 DQSLKESEEADDLQVDDEYAA 79
QS ++ EEA+ L+ E A
Sbjct: 2140 AQSRRQVEEAERLKQSAEEQA 2160
Score = 28.2 bits (61), Expect = 8.4
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 3 RRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSL 62
RR+ E E + RK +ELQ QL+Q+R+ ++ LA+ + L E L ++ ++ +L
Sbjct: 2591 RRRQHEAEEGVRRKQEELQ--QLEQQRRQQEELLAEEN---QRLREQLQLLEE-QHRAAL 2644
Query: 63 KESEEADDLQV 73
SEE QV
Sbjct: 2645 AHSEEVTASQV 2655
>ugc|Hs.58609.2|Hs.58609 190.6 915 136 25 1039 GENE= PROTSIM= ESTs;
minus strand; translated
Length = 338
Score = 29.0 bits (63), Expect = 4.9
Identities = 18/48 (37%), Positives = 28/48 (57%), Gaps = 1/48 (2%)
Query: 47 AEDESLQKDFRYDQSLKESEEADDLQVDDEYAATSGIMDPRIIVTTSR 94
A+ ++ +K ++ Q LKE ++ LQ D E T G+ D IIVT S+
Sbjct: 183 ADFQNNEKFVQFKQQLKELKKQCGLQADREADGTEGV-DEDIIVTQSQ 229
>ugc|Hs.21343.2|Hs.21343 55.0 3568 2059 1 3422 GENE=KIAA0819
PROTSIM=PID:g2435546 KIAA0819 protein; minus strand;
translated
Length = 1139
Score = 29.0 bits (63), Expect = 4.9
Identities = 18/57 (31%), Positives = 31/57 (53%), Gaps = 4/57 (7%)
Query: 3 RRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYD 59
R +ARE+ K+Q L+D+ +Q ++ + LA G P P++ + S K+ R D
Sbjct: 583 RMRAREKSV----KSQALRDAMARQLSRMQQMELASGAPRPRKASSAPSQGKERRPD 635
>ugc|Hs.620.1|Hs.620 355.0 7725 222 1 8073 GENE=BPAG1
PROTSIM=PID:g6624583 bullous pemphigoid antigen 1
(230/240kD); translated
Length = 2691
Score = 29.0 bits (63), Expect = 4.9
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 37/126 (29%)
Query: 2 LRRQARERREYL----------YRKAQELQDSQLQQKRQI--IKQ-------------AL 36
L RQ ++ RE + Y+K Q+L+D + QKR++ +KQ L
Sbjct: 1816 LERQLQQYREQMQQGQHMEANHYQKCQKLEDELIAQKREVENLKQKMDQQIKEHEHQLVL 1875
Query: 37 AQGKPLPKELAEDESLQKDFRYDQSLKESEEADDLQVDDEYAATSGIMDPRIIVTTSRDP 96
Q + K A+D + + DF + ++KE + + +L + +G + P T R P
Sbjct: 1876 LQCEIQKKSTAKDCTFKPDF--EMTVKECQHSGELS-----SRNTGHLHP-----TPRSP 1923
Query: 97 STRLSQ 102
R +Q
Sbjct: 1924 LLRWTQ 1929
>ugc|Hs.116885.1|Hs.116885 115.2 601 190 22 574 GENE=
PROTSIM=PID:g3876449 ESTs, Weakly similar to
P300/CBP-associated factor [H.sapiens]; translated
Length = 184
Score = 28.6 bits (62), Expect = 6.4
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 8 ERREYLYRKAQELQDSQL-QQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESE 66
ER+ L K + ++D + + + LAQGK LP EL+ + + ++E +
Sbjct: 41 ERKRELEEKVKAVEDRRRGESSGKKGXWLLAQGKELPPELSHLDP-------NSPMREEK 93
Query: 67 EADDL-QVDDEYAATSGIMD 85
+ DL ++DD++ A ++D
Sbjct: 94 KTKDLFELDDDFTAMYKVLD 113
>ugc|Hs.44836.1|Hs.44836 107.9 3959 1346 4 2761 GENE=INCENP
PROTSIM=SP:Q07283 inner centromere protein antigens
(135kD, 155kD); translated
Length = 919
Score = 28.6 bits (62), Expect = 6.4
Identities = 40/201 (19%), Positives = 77/201 (37%), Gaps = 19/201 (9%)
Query: 4 RQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGK---PLPKELAE--------DESL 52
R+ +ERRE R+ + + + +Q+RQ+ +Q + + +EL E E L
Sbjct: 693 RREQERREQERREQERREQERREQERQLAEQERRREQERLQAERELQEREKALRLQKEQL 752
Query: 53 QKDFRYDQSLKESEEADDLQVDDEY----AATSGIMDPRIIVTTSRDPSTRLSQFAKEIK 108
Q++ + +E + + Q+ +E +G + + P+ S +
Sbjct: 753 QRELEEKKKKEEQQRLAERQLQEEQEKKAKEAAGASKALNVTVDVQSPACTSSPITPQGH 812
Query: 109 LLFPNAVRLNRGNYVMP-NLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSL 167
P ++N NY M N D+ + RG P S I H + P L
Sbjct: 813 KAPP---QINPHNYGMDLNSDDSTDDEAHPRKPIPTWARGTPLSQAIIHQYYQPPNLLEL 869
Query: 168 HNVVMRHDIINAGNQSEVNPH 188
++ D+ + +S+ H
Sbjct: 870 FGTILPLDLEDIFKKSKPRYH 890
>ugc|Hs.16364.1|Hs.16364 164.3 1650 319 141 2084 GENE=FLJ10955
PROTSIM=PID:g7023323 hypothetical protein FLJ10955;
translated
Length = 647
Score = 28.6 bits (62), Expect = 6.4
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 1 MLRRQARERREYLYRKAQELQDSQLQQKRQI 31
ML RQ RR+ R+ +EL++ +LQ+++QI
Sbjct: 335 MLMRQDLMRRQEELRRLEELRNQELQKRKQI 365
>ugc|Hs.241405.1|Hs.241405 165.8 2273 433 22 1553 GENE=
PROTSIM=PID:g861254 Homo sapiens chromosome 19, BAC
41195 (CIT-B-31c16); translated
Length = 509
Score = 28.2 bits (61), Expect = 8.4
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 21 QDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQSLKESEEADDLQVDDE 76
+DS QQK + Q +G PK E E ++ DQ + E + + D +
Sbjct: 377 EDSNTQQKSEHKNQRKTKGAHEPKSKEEQEKARRTEEKDQKRERKHETETHETDPQ 432
>ugc|Hs.204166.2|Hs.204166 66.6 2070 1063 32 1640 GENE=
PROTSIM=PID:g3879548 Human clone 295, 5cM region
surrounding hepatocyte nuclear factor-1a/MODY3 mRNA;
translated
Length = 536
Score = 28.2 bits (61), Expect = 8.4
Identities = 22/80 (27%), Positives = 40/80 (49%), Gaps = 13/80 (16%)
Query: 1 MLRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQ 60
+L RQ ++ L++ ELQ+ +L ++ +K +EL E+ SLQ
Sbjct: 334 ILERQGHDKDLQLHQSQLELQEVRLSCRQLQVKV---------EELTEERSLQSSAATST 384
Query: 61 SL----KESEEADDLQVDDE 76
SL ++S EA++L+ + E
Sbjct: 385 SLLSEIEQSMEAEELEQERE 404
Database: Hs_contigs_pep.seq
Posted date: Feb 9, 2001 8:32 PM
Number of letters in database: 13,158,863
Number of sequences in database: 51,586
Lambda K H
0.320 0.136 0.386
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7414170
Number of Sequences: 51586
Number of extensions: 303763
Number of successful extensions: 1237
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1161
Number of HSP's gapped (non-prelim): 77
length of query: 290
length of database: 13,158,863
effective HSP length: 50
effective length of query: 240
effective length of database: 10,579,563
effective search space: 2539095120
effective search space used: 2539095120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 61 (28.2 bits)