Legend:
Sequences with E-value BETTER than threshold 692 0.0
687 0.0
610 e-174
567 e-160
563 e-159
410 e-113
394 e-109
382 e-105
373 e-102
342 5e-93
330 2e-89
228 7e-59
47 5e-04
45 0.002
Sequences with E-value WORSE than threshold pir||T50616 hypothetical protein DKFZp761G0415.1 - human (fragment) 45 0.002
dbj|BAB14086.1| (AK022537) unnamed protein product [Homo sapiens] 44 0.003
emb|CAC18315.1| (AL451022) probable IMP4 protein [Neurospora cra... 42 0.017
emb|CAC01521.1| (AL391034) conserved hypothetical protein [Schiz... 40 0.043
emb|CAB55338.1| (AJ006754) hypothetical protein [Yarrowia lipoly... 37 0.35
gb|AAF53162.1| (AE003635) CG6712 gene product [Drosophila melano... 37 0.47
sp|P32113|COPA_ENTHR COPPER/POTASSIUM-TRANSPORTING ATPASE A >gi|... 37 0.49
sp|O14180|YDS4_SCHPO HYPOTHETICAL 35.8 KD PROTEIN C4F8.04 IN CHR... 35 1.3
sp|O13823|YEE7_SCHPO HYPOTHETICAL 33.4 KDA PROTEIN C19A8.07C IN ... 35 1.9
emb|CAB71230.1| (AL049768) possible BING4-related protein. [Leis... 35 1.9
Alignments
>gb|AAD16459.1| (AF102805) Peter Pan [Drosophila melanogaster]
Length = 460
Score = 692 bits (1767), Expect = 0.0
Identities = 412/460 (89%), Positives = 412/460 (89%)
Query: 1 MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN 60
MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN
Sbjct: 1 MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN 60
Query: 61 LREKRMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV 120
LREKRMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV
Sbjct: 61 LREKRMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV 120
Query: 121 ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV 180
ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV
Sbjct: 121 ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV 180
Query: 181 LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGYXXXXX 240
LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGY
Sbjct: 181 LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGYASESE 240
Query: 241 XXXXXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV 300
QSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV
Sbjct: 241 AEDDEQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV 300
Query: 301 KTEDEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD 360
KTEDEKET AENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD
Sbjct: 301 KTEDEKETLRKLVEKKRKQKEQRKKEQAENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD 360
Query: 361 AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERTXXXXX 420
AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERT
Sbjct: 361 AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERTDKYDR 420
Query: 421 XXXXXXXXXXXXXXPKNGRAKFDPKNKRAKFDHRKSRKSK 460
PKNGRAKFDPKNKRAKFDHRKSRKSK
Sbjct: 421 KDKFDRKDKKDKFDPKNGRAKFDPKNKRAKFDHRKSRKSK 460
>gb|AAF55851.1| (AE003733) ppan gene product [Drosophila melanogaster]
Length = 460
Score = 687 bits (1756), Expect = 0.0
Identities = 409/460 (88%), Positives = 410/460 (88%)
Query: 1 MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN 60
MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN
Sbjct: 1 MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN 60
Query: 61 LREKRMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV 120
LREKRMNRI+DFV LSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV
Sbjct: 61 LREKRMNRIKDFVSLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV 120
Query: 121 ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV 180
ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV
Sbjct: 121 ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV 180
Query: 181 LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGYXXXXX 240
LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGY
Sbjct: 181 LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGYASESE 240
Query: 241 XXXXXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV 300
QSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV
Sbjct: 241 AEDDEQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV 300
Query: 301 KTEDEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD 360
KTEDEKET AENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD
Sbjct: 301 KTEDEKETLRKLVEKKRKQKEQRKKEQAENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD 360
Query: 361 AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERTXXXXX 420
AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERT
Sbjct: 361 AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERTDKYDR 420
Query: 421 XXXXXXXXXXXXXXPKNGRAKFDPKNKRAKFDHRKSRKSK 460
PKN RAKFDPKNKRAKFDHRKSRKSK
Sbjct: 421 KDKFDRKDKKDKFDPKNRRAKFDPKNKRAKFDHRKSRKSK 460
>emb|CAC18877.1| (AJ300588) SSF1/P2Y11 chimeric protein [Homo sapiens]
Length = 794
Score = 610 bits (1558), Expect = e-174
Identities = 148/430 (34%), Positives = 234/430 (54%), Gaps = 30/430 (6%)
Query: 5 KKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREK 64
+ H K A + PHSFV RG I L+LD RR+MEP TAS L+ +
Sbjct: 6 RSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTASRLQVR 65
Query: 65 RMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLS 124
+ N ++D V ++ V+H I +K T + FK++RLP GP+LTF+V +++L RDV+S
Sbjct: 66 KKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRDVVSSL 125
Query: 125 KKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSY 184
++ + F H PL+++N+F G H+KLMAT FQN+FPSIN+ VN+ TI+RC+L Y
Sbjct: 126 RRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRCLLIDY 185
Query: 185 NPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFV-TKDGYXXXXXXXX 243
NPD++ ++ RHYS++VVPVG R ++K+++ PN+ + ++ + + T G
Sbjct: 186 NPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSESEAEPD 245
Query: 244 XXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTE 303
+ L Q + +GN+ ++S+++L EIGPR+T+QLIK++EG+ G+V++H V KTE
Sbjct: 246 GDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTE 305
Query: 304 DEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDEKWAA----KRAAEGRTDSD--- 356
+E + A+N R + ++ + + K+A G +D +
Sbjct: 306 EELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASG 365
Query: 357 -PEDDAE----------------YYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNK 399
P A Y+ + VGE P E+LF EAK R S G K K
Sbjct: 366 IPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP-EAKQKRLAKSPG----RKRK 420
Query: 400 RAKLDTKDKN 409
R ++D K+
Sbjct: 421 RWEMDRGAKS 430
>ref|XP_009028.1| peter pan (Drosophila) homolog [Homo sapiens]
Length = 473
Score = 567 bits (1446), Expect = e-160
Identities = 148/427 (34%), Positives = 232/427 (53%), Gaps = 30/427 (7%)
Query: 5 KKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREK 64
+ H K A + PHSFV RG I L+LD RR+MEP TAS L+ +
Sbjct: 6 RSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTASRLQVR 65
Query: 65 RMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLS 124
+ N ++D V ++ V+H I +K T + FK++RLP GP+LTF+V Q++L RDV+S
Sbjct: 66 KKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVLQYSLVRDVVSSL 125
Query: 125 KKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSY 184
++ + F H PL+++N+F G H+KLMAT FQN+FPSIN+ VN+ TI+RC+L Y
Sbjct: 126 RRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRCLLIDY 185
Query: 185 NPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFV-TKDGYXXXXXXXX 243
NPD++ ++ RHYS++VVPVG R ++K+++ PN+ + ++ + + T G
Sbjct: 186 NPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSESEAEPD 245
Query: 244 XXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTE 303
+ L Q + +GN+ ++S+++L EIGPR+T+QLIK++EG+ G+V++H V KTE
Sbjct: 246 GDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTE 305
Query: 304 DEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDEKWAA----KRAAEGRTDSD--- 356
+E + A+N R + ++ + + K+A G +D +
Sbjct: 306 EELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASG 365
Query: 357 -PEDDAE----------------YYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNK 399
P A Y+ + VGE P E+LF EAK R S G K K
Sbjct: 366 IPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP-EAKQKRLAKSPG----RKRK 420
Query: 400 RAKLDTK 406
R ++D
Sbjct: 421 RWEMDRG 427
>ref|NP_064615.1| peter pan (Drosophila) homolog; second-step splicing factor 1 [Homo
sapiens]
emb|CAB99252.1| (AJ292529) suppressor of sterile four 1 [Homo sapiens]
Length = 473
Score = 563 bits (1438), Expect = e-159
Identities = 147/427 (34%), Positives = 232/427 (53%), Gaps = 30/427 (7%)
Query: 5 KKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREK 64
+ H K A + PHSFV RG I L+LD RR+MEP TAS L+ +
Sbjct: 6 RSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTASRLQVR 65
Query: 65 RMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLS 124
+ N ++D V ++ V+H I +K T + FK++RLP GP+LTF+V +++L RDV+S
Sbjct: 66 KKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRDVVSSL 125
Query: 125 KKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSY 184
++ + F H PL+++N+F G H+KLMAT FQN+FPSIN+ VN+ TI+RC+L Y
Sbjct: 126 RRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRCLLIDY 185
Query: 185 NPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFV-TKDGYXXXXXXXX 243
NPD++ ++ RHYS++VVPVG R ++K+++ PN+ + ++ + + T G
Sbjct: 186 NPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSESEAEPD 245
Query: 244 XXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTE 303
+ L Q + +GN+ ++S+++L EIGPR+T+QLIK++EG+ G+V++H V KTE
Sbjct: 246 GDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTE 305
Query: 304 DEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDEKWAA----KRAAEGRTDSD--- 356
+E + A+N R + ++ + + K+A G +D +
Sbjct: 306 EELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASG 365
Query: 357 -PEDDAE----------------YYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNK 399
P A Y+ + VGE P E+LF EAK R S G K K
Sbjct: 366 IPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP-EAKQKRLAKSPG----RKRK 420
Query: 400 RAKLDTK 406
R ++D
Sbjct: 421 RWEMDRG 427
>dbj|BAB10077.1| (AB010069) contains similarity to RNA binding
protein~gene_id:MAC9.8 [Arabidopsis thaliana]
Length = 346
Score = 410 bits (1044), Expect = e-113
Identities = 111/274 (40%), Positives = 171/274 (61%), Gaps = 3/274 (1%)
Query: 27 APHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNRIQDFVCLSSFFHVSHMGI 86
P SFV R + L +D R++M P+TA +L+EK+ N ++DF+ +S V+H +
Sbjct: 33 IPKSFVFSRMKLAGPVKQLQMDLRKLMLPYTALSLKEKKRNTLRDFLNVSGPMGVTHFLM 92
Query: 87 FNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFS 146
+K ++ LS +V R P+GP+LTFK+HQ++LA D+ + D FK PL++++ F
Sbjct: 93 LSKTASSLSLRVARTPQGPTLTFKIHQYSLASDIAQSQLRPRCPQDLFKSPPLIVLSGFG 152
Query: 147 GDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHYSVQVVPVGLK 206
HLKL FQN+FP+I++ TV + T +R VL +YN DTKL++ RHYS+++ PVG+
Sbjct: 153 SQELHLKLATIMFQNIFPAIDINTVKLSTCQRLVLLNYNKDTKLIDFRHYSIRLQPVGVS 212
Query: 207 RAVQKIVKG-TVPNLGKCNEVVDFVTKDGYXXXXXXXXXXQSHVVLAQTLKSKGNLEDKK 265
R ++K V+ VP+L +V DFVTK GY + V L+ L + N K
Sbjct: 213 RRIRKFVQNHQVPDLRNLQDVSDFVTKAGYGSESEGDEEAAT-VTLSSDL-GRVNKGATK 270
Query: 266 SSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHV 299
S++KL EIGPR+TMQL+K+EEGL TG +++ ++
Sbjct: 271 SAVKLQEIGPRMTMQLVKVEEGLCTGGIIFSEYE 304
>ref|NP_011933.1| homologous to Ssf2p; Ssf1p [Saccharomyces cerevisiae]
sp|P38789|SSF1_YEAST SSF1 PROTEIN
pir||S46700 SSF1 protein - yeast (Saccharomyces cerevisiae)
gb|AAB68379.1| (U00061) Ssf1p [Saccharomyces cerevisiae]
gb|AAA79980.1| (U18113) Ssf1p [Saccharomyces cerevisiae]
Length = 453
Score = 394 bits (1004), Expect = e-109
Identities = 114/421 (27%), Positives = 196/421 (46%), Gaps = 82/421 (19%)
Query: 6 KVHPKTRTAAFKASEPSEIVEAPHSFVIHRG---LACPYITDLTLDFRRIMEPFTASNLR 62
K K RT A E + + P S VI G LA + L DFR+IM+P TA L+
Sbjct: 3 KRRQKKRTHAQLTPEQEQGI--PKSMVIRVGQTSLANHSLNQLVKDFRQIMQPHTAIKLK 60
Query: 63 EKRMNRIQDFVCLSSFFHVSHMGIFNKA--STQLSFKVVRLPRGPSLTFKVHQFTLARDV 120
E++ N+++DFV + V+H+ +F ++ + +S K+ R P+GP++TF+V ++L RD+
Sbjct: 61 ERKSNKLKDFVVMCGPLGVTHLFMFTQSEKTGNVSLKIARTPQGPTVTFQVLDYSLGRDI 120
Query: 121 IS-LSKKQMIDNDHFKHAPLVIMNNFSGDGKH---------LKLMATTFQNMFPSINLAT 170
L + + ++ND + PL+++N FS + K++ + FQN+FP +N A
Sbjct: 121 KKFLKRPKSLNNDDVLNPPLLVLNGFSTSKRSGEDDQDVNVEKVIVSMFQNIFPPLNPAR 180
Query: 171 VNIGTIRRCVLFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKG------TVPNLGKCN 224
++ +I+R + + + +T + MRHY + + V + R ++++ K TVPNL +
Sbjct: 181 TSLNSIKRVFMINKDRETGEISMRHYFIDIREVEISRNLKRLYKAKNNLSKTVPNLHRKE 240
Query: 225 EVVDFVTKDGYXXXXXXXXXXQSHVVL-----------AQTLKSK--------------- 258
++ + +V +Q+LKS+
Sbjct: 241 DISSLILDHDLGAYTSESEIEDDAIVRVVDNQDVKAKHSQSLKSQRTPVEKKDNKEREKE 300
Query: 259 --------------GNLE--DKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKT 302
NL+ +K +IKL E+GPRLT++L+KIEEG+ +G+VL+H+ V K+
Sbjct: 301 TEEEDVEMEEPKPSENLQPTPRKKAIKLTELGPRLTLKLVKIEEGICSGKVLHHEFVQKS 360
Query: 303 EDEKETXXXXXXXXXXXXXXXXXXXAENR-----------ARNLKLKKDEKWAAKRAAEG 351
+E + EN R L+ +K RAAEG
Sbjct: 361 SEEIKALEKRHAAKMRLKEQRKKEQEENIAKKKAVKDAKKQRKLERRKA------RAAEG 414
Query: 352 R 352
Sbjct: 415 G 415
>gb|AAF39738.1|AC005935_5 (AC005935) RNA Binding Protein 1 [Leishmania major]
gb|AAF43468.1|AC012381_4 (AC012381) RNA Binding Protein 1 [Leishmania major]
Length = 374
Score = 382 bits (973), Expect = e-105
Identities = 97/342 (28%), Positives = 172/342 (49%), Gaps = 21/342 (6%)
Query: 10 KTRTAA-FKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNR 68
K RTA K P S +I+RG ++ L ++R + P+++ L K +
Sbjct: 6 KGRTAMPGKLDTTEADKRTPKSIIIYRGEVGIHVRSLMHEWRNVFLPWSSKKLHGKNKS- 64
Query: 69 IQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQM 128
++DF+ +++ F SH+ +F S S +++R GP+L+F+V FTL +++++ ++ +
Sbjct: 65 LKDFLAVAATFSASHLQLFTAPSQGTSLRIMRFFNGPTLSFRVLSFTLHKEIVAKQRRPV 124
Query: 129 -IDNDHFKHAPLVIMNNFSG-DGKH---LKLMATTFQNMFPSINLATVNIGTIRRCVLFS 183
+D ++ AP+V++NNF+ D H + L+ TF+ +FPS+N+ T+ I+R LF
Sbjct: 125 AVDRAAWEVAPIVVLNNFTHPDLAHRAEVPLLTATFKALFPSLNVQTIQSSEIQRICLFH 184
Query: 184 YNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVP----NLGKCNEVVDFVTKDGYXXXX 239
Y+ +VE+RHY + VG+ + V+K+++ P L +EV+D +D +
Sbjct: 185 YDHVEHVVEVRHYYINARTVGVTKTVKKLLENRRPTKLGTLESIDEVLD--REDAWSDTD 242
Query: 240 XXXXXXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHV 299
V L Q + ++ +KL EIGPR+T+QL K+E G GEV+YH
Sbjct: 243 GEG----EEVPLVQPFRQ----HREQCRVKLQEIGPRMTLQLSKVENGFAGGEVIYHRTE 294
Query: 300 VKTEDEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDE 341
KT E + EN R + ++D+
Sbjct: 295 KKTLREVQVNASKVRARKTEKAKRRALQDENVQRKRQKREDK 336
>pir||T39008 probable mating protein - fission yeast (Schizosaccharomyces pombe)
emb|CAB11063.1| (Z98531) putative mating protein [Schizosaccharomyces pombe]
Length = 361
Score = 373 bits (949), Expect = e-102
Identities = 100/323 (30%), Positives = 166/323 (50%), Gaps = 23/323 (7%)
Query: 31 FVIHRG--LACPYITDLTLDFRRIMEPFTASNLREKRMNRIQDFVCLSSFFHVSHMGIFN 88
VI G ++ LT D R +MEP TA L+E++ N+I+D++ ++ V+H+ + +
Sbjct: 1 MVIRSGASEVGRSLSLLTRDLRHMMEPHTAIRLKERKANKIKDYLTMAGPLGVTHLLVLS 60
Query: 89 KASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNF--- 145
+ + +++R PRGPSL F++H++ L +DV L K F PL++MN+F
Sbjct: 61 RTDNNANLRIIRAPRGPSLHFRIHEYMLNKDVRRLQKNPKSPTTEFLTPPLLVMNHFNQN 120
Query: 146 -SGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHYSVQVVPVG 204
S D H L+ TTFQNMFP I++ NI +++R +L + D +++RH+ + PVG
Sbjct: 121 SSKDSPHEALLTTTFQNMFPPISVQHTNINSVKRVLLLNR-RDDGYIDLRHFIISTKPVG 179
Query: 205 LKRAVQKIVKGT-----VPNLGKCNEVVDFVTK-DGYXXXXXXXXXXQSHVV-------- 250
+ R ++ ++KG +P+L ++ D+V DG + V
Sbjct: 180 ISRPIRHLLKGEKKDSDIPDLHNVRDISDYVLHGDGISGAASDSEIEEDATVEIDRPVPT 239
Query: 251 --LAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTEDEKET 308
L + L+ K+ +IKL EIGPR+T++LIKI E + G+VLYH HV K+++E +
Sbjct: 240 KTEENLLSASQLLKPKQQAIKLIEIGPRMTLELIKITEDAMGGKVLYHSHVHKSKEEIKQ 299
Query: 309 XXXXXXXXXXXXXXXXXXXAENR 331
EN
Sbjct: 300 QDNFHEQSRALKEKRKKEQDENV 322
Score = 373 bits (949), Expect = e-102
Identities = 100/323 (30%), Positives = 166/323 (50%), Gaps = 23/323 (7%)
Query: 31 FVIHRG--LACPYITDLTLDFRRIMEPFTASNLREKRMNRIQDFVCLSSFFHVSHMGIFN 88
VI G ++ LT D R +MEP TA L+E++ N+I+D++ ++ V+H+ + +
Sbjct: 1 MVIRSGASEVGRSLSLLTRDLRHMMEPHTAIRLKERKANKIKDYLTMAGPLGVTHLLVLS 60
Query: 89 KASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNF--- 145
+ + +++R PRGPSL F++H++ L +DV L K F PL++MN+F
Sbjct: 61 RTDNNANLRIIRAPRGPSLHFRIHEYMLNKDVRRLQKNPKSPTTEFLTPPLLVMNHFNQN 120
Query: 146 -SGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHYSVQVVPVG 204
S D H L+ TTFQNMFP I++ NI +++R +L + D +++RH+ + PVG
Sbjct: 121 SSKDSPHEALLTTTFQNMFPPISVQHTNINSVKRVLLLNR-RDDGYIDLRHFIISTKPVG 179
Query: 205 LKRAVQKIVKGT-----VPNLGKCNEVVDFVTK-DGYXXXXXXXXXXQSHVV-------- 250
+ R ++ ++KG +P+L ++ D+V DG + V
Sbjct: 180 ISRPIRHLLKGEKKDSDIPDLHNVRDISDYVLHGDGISGAASDSEIEEDATVEIDRPVPT 239
Query: 251 --LAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTEDEKET 308
L + L+ K+ +IKL EIGPR+T++LIKI E + G+VLYH HV K+++E +
Sbjct: 240 KTEENLLSASQLLKPKQQAIKLIEIGPRMTLELIKITEDAMGGKVLYHSHVHKSKEEIKQ 299
Query: 309 XXXXXXXXXXXXXXXXXXXAENR 331
EN
Sbjct: 300 QDNFHEQSRALKEKRKKEQDENV 322
>pir||T32923 hypothetical protein K09H9.6 - Caenorhabditis elegans
gb|AAB97575.1| (AF043700) contains similarity to human RNA-binding protein FUS/TLS
(SW:Q28009) [Caenorhabditis elegans]
Length = 608
Score = 342 bits (869), Expect = 5e-93
Identities = 84/238 (35%), Positives = 143/238 (59%), Gaps = 7/238 (2%)
Query: 4 KKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLRE 63
++K K + F ++ E+ PH VIHRG Y+ L D R ++EP TA NL+
Sbjct: 32 QEKFVKKLQKQKFLENKEIELARQPHCLVIHRGDVGKYVKGLESDLRNLVEPNTAKNLKI 91
Query: 64 KRMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISL 123
+ N I+DF+ + V++M + + L +++R +GP+L+FKV Q++LAR V++
Sbjct: 92 LKRNNIKDFIVNGAVLGVTNMMVLTSSDASLQLRMMRFSQGPTLSFKVKQYSLARHVVNC 151
Query: 124 SKKQMIDNDHFKHAPLVIMNNFS-GDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLF 182
K+ + + FK +PLV+MN F G KHL L+ T QNMFPSIN+ T+ +G ++RC++
Sbjct: 152 QKRPVATDKLFKSSPLVVMNGFGDGTQKHLSLVQTFIQNMFPSINVDTIQLGNLKRCLIV 211
Query: 183 SYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKG------TVPNLGKCNEVVDFVTKDG 234
SY+ +T ++MRH++++VV GL ++V+K+++ +PNL ++ D+ G
Sbjct: 212 SYDEETDEIQMRHFAIRVVASGLNKSVKKLMQAEKTMGKNIPNLSTYKDISDYFLNPG 269
Score = 98.5 bits (243), Expect = 1e-19
Identities = 47/163 (28%), Positives = 67/163 (40%), Gaps = 6/163 (3%)
Query: 246 QSHVVLAQTL-KSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTED 304
Q V L Q + + +G +KS+++LHEIGPRLT++L+KIEEG+ GEVLYH H KT D
Sbjct: 315 QQEVELPQDISEGRGCGVGQKSNVRLHEIGPRLTLELVKIEEGIDEGEVLYHKHNAKTPD 374
Query: 305 EKETXXXXXXXXXXXXXXXXXXXAENRARNL----KLKKDEKWAAKRAAEGRTDSDPEDD 360
E + R L + + E+ K E
Sbjct: 375 ELIKLRAHMDKKKQMKKRREQESEQRVIRRLTIVKEQQDAEEAEVKAIRENAARKQAAAT 434
Query: 361 AEYYKEEVGEEPDEEL-FKMEAKSSRKRPSLGGGMKYKNKRAK 402
+ + E +E D E+ E R G K R +
Sbjct: 435 GQVEEVENQKEKDREIAMNRERDLKRANEEWGTSEASKRPRYE 477
>ref|NP_010598.1| possibly involved in mating; Ssf2p [Saccharomyces cerevisiae]
sp|Q12153|SSF2_YEAST SSF2 PROTEIN
pir||S50248 SSF2 protein - yeast (Saccharomyces cerevisiae)
gb|AAA79981.1| (U18114) Ssf2p [Saccharomyces cerevisiae]
gb|AAB64748.1| (U28374) Ssf2p [Saccharomyces cerevisiae]
Length = 453
Score = 330 bits (838), Expect = 2e-89
Identities = 80/293 (27%), Positives = 148/293 (50%), Gaps = 28/293 (9%)
Query: 6 KVHPKTRTAAFKASEPSEIVEAPHSFVIHRG---LACPYITDLTLDFRRIMEPFTASNLR 62
K K RT A E + P S VI G LA + L DFR+IM+P TA L+
Sbjct: 3 KRRQKKRTHAQITPEQE--RDIPKSMVIRVGQTSLANHSLNQLVKDFRQIMQPHTAVKLK 60
Query: 63 EKRMNRIQDFVCLSSFFHVSHMGIFNKA--STQLSFKVVRLPRGPSLTFKVHQFTLARDV 120
E++ N+++DFV + V+H+ +F ++ + +S K+ R P+GP++TF+V ++L RD+
Sbjct: 61 ERKSNKLKDFVVMCGPLGVTHLFMFTQSEKTGNVSLKIARTPQGPTVTFQVLDYSLGRDI 120
Query: 121 IS-LSKKQMIDNDHFKHAPLVIMNNFSGDGKH---------LKLMATTFQNMFPSINLAT 170
L + + ++ND + PL+++N FS + K++ + FQN+FP +N A
Sbjct: 121 KKFLKRPKSLNNDDVLNPPLLVLNGFSTSKRSDEDDQDVNVEKVIVSMFQNIFPPLNPAR 180
Query: 171 VNIGTIRRCVLFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKG------TVPNLGKCN 224
++ +I+R + + + +T + MRHY + + V + R ++++ K TVPNL +
Sbjct: 181 TSLNSIKRIFMINKDRETGEISMRHYFIDIREVEISRNLKRLYKAKNNLSKTVPNLHRKE 240
Query: 225 EVVDFVTKDGYXXXXXXXXXXQSHVVLA---QTLKSK--GNLEDKKSSIKLHE 272
++ + +V Q +K+K +K+ +K+ +
Sbjct: 241 DISSLILDHDLGAYTSESEIEDDAIVRVVDNQDVKAKHSQTSLSQKTPVKMTD 293
Score = 81.0 bits (198), Expect = 3e-14
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 263 DKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTEDEKETXXXXXXXXXXXXXX 322
+K +IKL E+GPRLT++L+KIE+G+ +G+VL+H+ V K+ +E +
Sbjct: 321 PRKKAIKLTELGPRLTLKLVKIEDGICSGKVLHHEFVQKSSEEIKALEKRHAAKMRLKEQ 380
Query: 323 XXXXXAENR-----------ARNLKLKKDE 341
EN R L+ +K
Sbjct: 381 RRKEQEENIAKKKAVKDAKKQRKLERRKAR 410
>gb|AAH00535.1|AAH00535 (BC000535) Unknown (protein for MGC:3007) [Homo sapiens]
Length = 251
Score = 228 bits (578), Expect = 7e-59
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 30/223 (13%)
Query: 209 VQKIVKGTVPNLGKCNEVVDFV-TKDGYXXXXXXXXXXQSHVVLAQTLKSKGNLEDKKSS 267
++K+++ PN+ + ++ + + T G + L Q + +GN+ ++S+
Sbjct: 1 MKKLLQEKFPNMSRLQDISELLATGAGLSESEAEPDGDHNITELPQAVAGRGNMRAQQSA 60
Query: 268 IKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTEDEKETXXXXXXXXXXXXXXXXXXX 327
++L EIGPR+T+QLIK++EG+ G+V++H V KTE+E +
Sbjct: 61 VRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTEEELQAILEAKEKKLRLKAQRQAQQ 120
Query: 328 AENRARNLKLKKDEKWAA----KRAAEGRTDSD----PEDDAE----------------Y 363
A+N R + ++ + + K+A G +D + P A Y
Sbjct: 121 AQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEY 180
Query: 364 YKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTK 406
+ + VGE P E+LF EAK R S G K KR ++D
Sbjct: 181 FCQAVGEAPSEDLFP-EAKQKRLAKSPG----RKRKRWEMDRG 218
>pir||T01938 hypothetical protein F11O4.6 - Arabidopsis thaliana
gb|AAC62782.1| (AF096370) contains similarity to a C. elegans hypothetical protein
F44G4.1 (GB:Z49910) and several yeast hypothetical
proteins such as 35.1 KD protein in NAM8-GAR1 intergenic
region (SP:P38805) [Arabidopsis thaliana]
Length = 434
Score = 47.1 bits (111), Expect = 5e-04
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 16/100 (16%)
Query: 96 FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLM 155
++ LP GP+ FK+ L +D+ + H P +++NNF+ + +
Sbjct: 213 LLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTS-------HQPELVLNNFTTRLGNR--V 263
Query: 156 ATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRH 195
FQ++FP + RR V F D + RH
Sbjct: 264 GRFFQSLFPP-DPNFRG----RRVVTFHNQRD--FIFFRH 296
>emb|CAB77726.1| (AL161492) hypothetical protein [Arabidopsis thaliana]
Length = 343
Score = 45.1 bits (106), Expect = 0.002
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 16/100 (16%)
Query: 96 FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLM 155
++ LP GP+ FK+ L +D+ + H P +++NNF+ + +
Sbjct: 193 LLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTS-------HQPELVLNNFTTRLGNR--V 243
Query: 156 ATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRH 195
FQ++FP + RR V F D + RH
Sbjct: 244 GRFFQSLFPP-DPNFRG----RRVVTFHNQRD--FIFFRH 276
>pir||T50616 hypothetical protein DKFZp761G0415.1 - human (fragment)
Length = 256
Score = 44.7 bits (105), Expect = 0.002
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 101 LPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQ 160
LP GP+ FK+ L +++ K +H P +I+NNF+ H + F
Sbjct: 120 LPNGPTAHFKMSSVRLRKEIKRRGKDPT------EHIPEIILNNFTTRLGHS--IGRMFA 171
Query: 161 NMFP 164
++FP
Sbjct: 172 SLFP 175
>dbj|BAB14086.1| (AK022537) unnamed protein product [Homo sapiens]
Length = 349
Score = 44.3 bits (104), Expect = 0.003
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 101 LPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQ 160
LP GP+ FK+ L +++ K +H P +I+NNF+ H + F
Sbjct: 213 LPNGPTAHFKMSSVRLRKEIKRRGKDPT------EHIPEIILNNFTTRLGHS--IGRMFA 264
Query: 161 NMFP 164
++FP
Sbjct: 265 SLFP 268
>emb|CAC18315.1| (AL451022) probable IMP4 protein [Neurospora crassa]
Length = 295
Score = 41.6 bits (97), Expect = 0.017
Identities = 42/211 (19%), Positives = 84/211 (38%), Gaps = 26/211 (12%)
Query: 21 PSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNRIQDFVCLSSFFH 80
V P V + + + R ++ P T+ L + ++D V + +
Sbjct: 77 ELSGVIDPRILVTTSRDPSSRLGQFSKEIR-LLLP-TSVRLN-RGNLVLEDLVGAAKAQN 133
Query: 81 VSHMGIFNKAST-QLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPL 139
++ + + ++ + + P GP+L +H L D+ K + + P
Sbjct: 134 LTDVVLLHEHRGVPTAMTISHFPHGPTLMVSLHNVVLRADIPKSIKGTVS-----ESYPR 188
Query: 140 VIMNNFSGDGKHLKLMATTFQNMFPSINL-ATVNIGTIRRCVLFSYNPDTKLVEMRHY-- 196
+I FS +++ +++FP N+G R + F N DT +E+RH+
Sbjct: 189 LIFEGFST-KLGERVVKIL-KHLFPPREPTQKPNVGN--RVITFVNNDDT--IEVRHHVY 242
Query: 197 ------SVQVVPVGLKRAVQ--KIVKGTVPN 219
SV++ VG + ++ KI GT+ N
Sbjct: 243 VRTSYDSVELSEVGPRFTMKPFKITMGTLDN 273
>emb|CAC01521.1| (AL391034) conserved hypothetical protein [Schizosaccharomyces
pombe]
Length = 295
Score = 40.4 bits (94), Expect = 0.043
Identities = 28/164 (17%), Positives = 60/164 (36%), Gaps = 22/164 (13%)
Query: 43 TDLTLDFRRIMEPFTASNLREKRMNRIQDFVCLSSFFHVSHMGIF-NKASTQLSFKVVRL 101
L D +M P + + + +R+ L+ ++ +++ F ++ L + R
Sbjct: 58 RHLLNDLVSMM-PHSKKDSKLDSKDRLYQLNELAELYNCNNIFFFESRRREDLYLHIARA 116
Query: 102 PRGPSLTFKVH------QFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLM 155
P GP++ F V + + + + S+ + + F AP HLK++
Sbjct: 117 PNGPTVKFHVENLHTMDELNMTGNALKGSRPILSFDKTFDTAP------------HLKVV 164
Query: 156 ATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHYSVQ 199
Q F A + I R + + R+Y ++
Sbjct: 165 KELLQQTFGIPKGARRSKPFIDRVCTLTI--ADGKIWFRNYEIR 206
Score = 37.7 bits (87), Expect = 0.26
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 258 KGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLY 295
+ N + K + L EIGPR M +I I EG G V+Y
Sbjct: 206 RENEDKSKDPVTLIEIGPRFVMTIINILEGSFGGPVIY 243
>emb|CAB55338.1| (AJ006754) hypothetical protein [Yarrowia lipolytica]
Length = 333
Score = 37.3 bits (86), Expect = 0.35
Identities = 20/91 (21%), Positives = 41/91 (44%), Gaps = 10/91 (10%)
Query: 75 LSSFFHVSHMGIFNKASTQLS-FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDH 133
+ + + + + N+ +++ + LP GP++ F V + +++ +
Sbjct: 176 MCAERDYTDLVVINEDKKKVNGLTFIHLPEGPTMYFSVSSLKMPKEIKGHGRSTT----- 230
Query: 134 FKHAPLVIMNNFSGDGKHLKLMATTFQNMFP 164
H P +I+NNFS K + FQ+MFP
Sbjct: 231 --HIPELILNNFSTRLG--KTVGRLFQSMFP 257
>gb|AAF53162.1| (AE003635) CG6712 gene product [Drosophila melanogaster]
Length = 394
Score = 36.9 bits (85), Expect = 0.47
Identities = 17/52 (32%), Positives = 25/52 (47%), Gaps = 6/52 (11%)
Query: 96 FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSG 147
V+ LP GP+ FK+ L D+ + + KH P VI+NNF+
Sbjct: 251 LLVIHLPNGPTAHFKLSNVKLTSDI------KRDHKEITKHRPEVILNNFTT 296
>sp|P32113|COPA_ENTHR COPPER/POTASSIUM-TRANSPORTING ATPASE A
pir||A45995 copper-transporting ATPase (EC 3.6.1.-) copA - Enterococcus hirae
gb|AAA61835.1| (L13292) ATPase [Enterococcus hirae]
Length = 727
Score = 36.9 bits (85), Expect = 0.49
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 250 VLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHD-HVVKTEDEKET 308
+ + NL +K+S+K + T +LIK E + G +LY + H K +EK+T
Sbjct: 30 EQPGVMSATVNLATEKASVKYTDT---TTERLIKSVENIGYGAILYDEAHKQKIAEEKQT 86
>sp|O14180|YDS4_SCHPO HYPOTHETICAL 35.8 KD PROTEIN C4F8.04 IN CHROMOSOME I
pir||T38834 hypothetical coiled-coil protein - fission yeast
(Schizosaccharomyces pombe)
emb|CAB11051.1| (Z98530) hypothetical coiled-coil protein [Schizosaccharomyces
pombe]
Length = 306
Score = 35.4 bits (81), Expect = 1.3
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 80 HVSHMGIFNKASTQLS-FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAP 138
+ + + N+ + + +V LP GPS F + A+++ + + H P
Sbjct: 144 GYTDLLVLNEDRKKTNALTLVHLPNGPSFYFTLSNLQTAKEISNHGRST-------GHIP 196
Query: 139 LVIMNNFSGDGKHLKLMATTFQNMF---PSINLATVNIGTIRRCVLFSYNP 186
+I+NNFS +A FQ++F P I V +R LF
Sbjct: 197 ELIINNFSTRLGMT--VARAFQSLFIQTPQIQGRQVVTIHCQRDFLFFRRH 245
>sp|O13823|YEE7_SCHPO HYPOTHETICAL 33.4 KDA PROTEIN C19A8.07C IN CHROMOSOME I
pir||T37954 hypothetical protein SPAC19A8.07c - fission yeast
(Schizosaccharomyces pombe)
emb|CAB11643.1| (Z98974) hypothetical protein [Schizosaccharomyces pombe]
Length = 289
Score = 35.0 bits (80), Expect = 1.9
Identities = 24/102 (23%), Positives = 36/102 (34%), Gaps = 16/102 (15%)
Query: 96 FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLM 155
+ LP GP+L+F +H L D+ + L+ N S GK +K
Sbjct: 150 LVISHLPYGPTLSFSLHNVVLRHDI------PNTGTMSEAYPHLIFENLTSKLGKRVK-- 201
Query: 156 ATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHYS 197
T +FP T R V F+ + RH+
Sbjct: 202 -TALSALFPPDPKDTT-----PRVVTFA--NTDDYISFRHHI 235
>emb|CAB71230.1| (AL049768) possible BING4-related protein. [Leishmania major]
Length = 680
Score = 35.0 bits (80), Expect = 1.9
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 329 ENRARNLKLKKDEKWAAKRAAEGRTDSDPEDDAEYYKEEVG--EEPDEELFKMEAKSSRK 386
EN N K + + +RA++ ++ P VG EE DEEL EA +++
Sbjct: 477 ENLRLNRKARAIREKKMRRASKSLGEAAPTGLL------VGRDEEVDEELGYKEAPKTKE 530
Query: 387 RPSLGGGMKYKNKRAKLDTKDKNDK 411
S ++ + K AK D KD DK
Sbjct: 531 VKSR-QELQRERKMAKWDKKDSADK 554
CPU time: 49.32 user secs. 1.61 sys. secs 50.93 total secs.
Database: nr
Posted date: Feb 10, 2001 7:10 PM
Number of letters in database: 195,544,254
Number of sequences in database: 618,844
Lambda K H
0.312 0.167 0.486
Gapped
Lambda K H
0.270 0.0587 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153956271
Number of Sequences: 618844
Number of extensions: 5792420
Number of successful extensions: 20058
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 19486
Number of HSP's gapped (non-prelim): 477
length of query: 460
length of database: 195,544,254
effective HSP length: 60
effective length of query: 400
effective length of database: 158,413,614
effective search space: 63365445600
effective search space used: 63365445600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.0 bits)
S2: 74 (32.9 bits)