HumanPRENbase
Database of Prenylated Human
Proteins and their Orthologues
Protein CaaX Farnesylation, CaaX Geranylgeranylation and Rab Geranylgeranylation

CLUSTER parameter selection REQUIRE one of the features for at least one member of listed clusters: Status-NEW Mammalia Plants EXCLUDE clusters with the following features for at least one member: Status-KNOWN Status-LIKELY Status-OUT-OF-CONTEXT Other features for cluster members are ALLOWED. Minimum cluster-size: 1

SEQUENCE parameter selection INCLUDE entries with the following features: Viruses Mammalia Aves Amphibia Fishes Insecta Nematoda Fungi Plants Other-Eukaryota EXCLUDE entries with the following features: Synthetic-constructs

Ranked by evOluation of full cluster

Querycode: Hcs0020ce111ct11112111111211cm1se111st00202222222221r2 (save for easy recovery of the identical query parameters)

Clusters							Selected Sequences
General Information				Stats				Stats			Enzyme			Taxonomic Kingdom			Taxonomic Detail Eukaryota
Status	Rank	ClustID	Name	Pren	Total	PC	EvO	Number	PC	EvO	FT	GGT1	GGT2	Viruses	Synthetic	Eukaryota	Mammalia	Birds	Amphibia	Fishes	Insecta	Nematoda	Fungi	Plants	Other
?	1	55777304 (3 isoinpas)	Ubiquitin-like 3	12	14	8.000	10.286	12 Explore	8.000	10.286	12	10	0	0	0	12	3	1	1	1	2	2	1	1	0
?	2	7243161 (3 isoinpas)	DUF544	10	11	4.167	9.091	10 Explore	4.167	9.091	10	9	0	0	0	10	5	0	1	0	0	1	1	2	0
?	3	41018470 (3 isoinpas)	WD and tetratricopeptide repeats protein 1	7	15	3.000	3.267	7 Explore	3.000	3.267	7	0	0	0	0	7	2	1	0	1	0	1	1	1	0
?	4	458692 (3 isoinpas)	WD repeat domain 42A	7	16	2.000	3.062	7 Explore	2.000	3.062	7	1	0	0	0	7	4	0	1	0	0	0	1	1	0

Your query selected 36 sequences in 4 clusters.