BLASTP 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= consensus (477 letters) Database: nr95_Pfam18 2,959,546 sequences; 830,037,145 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value gi|8777406|dbj|BAA96996.1| unnamed protein product [Arabidopsis ... 650 0.0 DUF1423_Q9LUB7_73-557_PF07227.1 640 0.0 gi|6466960|gb|AAF13095.1| unknown protein [Arabidopsis thaliana] 631 e-179 DUF1423_Q9S736_74-548_PF07227.1 619 e-176 gi|30385713|gb|AAP22955.1| Potyvirus VPg interacting protein [Pi... 598 e-169 DUF1423_Q84N37_19-496_PF07227.1 595 e-169 gi|30385711|gb|AAP22954.1| Potyvirus VPg interacting protein [Ni... 573 e-162 DUF1423_Q84N38_72-549_PF07227.1 568 e-160 gi|20148719|gb|AAM10250.1| unknown protein [Arabidopsis thaliana] 414 e-114 gi|8778236|gb|AAF79245.1| F10B6.14 [Arabidopsis thaliana] 412 e-114 DUF1423_Q9LQV7_285-755_PF07227.1 398 e-109 gi|28973711|gb|AAO64172.1| unknown protein [Arabidopsis thaliana] 380 e-104 gi|7573333|emb|CAB87803.1| putative protein [Arabidopsis thaliana] 375 e-102 DUF1423_Q84TI3_497-969_PF07227.1 367 e-100 gi|33339558|gb|AAQ14302.1| ABRH1 [Marsilea quadrifolia] 104 5e-21 DUF1423_Q7X9D9_31-147_PF07227.1 96 3e-18 gi|40804910|gb|AAR91717.1| vernalization insensitive 3 [Arabidop... 62 2e-08 gi|14583098|gb|AAK69758.1| CDPK adapter protein 1 [Mesembryanthe... 56 2e-06 gi|50942423|ref|XP_480739.1| putative coiled-coil protein [Oryza... 54 8e-06 gi|9294095|dbj|BAB01947.1| unnamed protein product [Arabidopsis ... 54 1e-05 gi|51535981|dbj|BAD38062.1| putative coiled-coil protein [Oryza ... 52 5e-05 gi|50918667|ref|XP_469730.1| unknown protein [Oryza sativa (japo... 49 4e-04 gi|51038197|gb|AAT94000.1| unknow protein [Oryza sativa (japonic... 47 0.002 gi|60547711|gb|AAX23819.1| hypothetical protein At2g18880 [Arabi... 45 0.005 gi|50759355|ref|XP_425739.1| PREDICTED: similar to C-ski protein... 41 0.073 gi|71996161|ref|NP_001022955.1| Y79H2A.3a [Caenorhabditis elegans] 41 0.086 gi|18859373|ref|NP_571010.1| nuclear oncoprotein skia [Danio rerio] 40 0.10 gi|66359990|ref|XP_627173.1| multidomain chromatinic protein [Cr... 39 0.38 gi|4506967|ref|NP_003027.1| v-ski sarcoma viral oncogene homolog... 39 0.40 gi|104547|pir||C32575 C-ski protein FB27 - chicken 39 0.42 gi|68299728|ref|YP_249577.1| RNA polymerase [Vibriophage VP4] 38 0.46 gi|73956613|ref|XP_546730.2| PREDICTED: similar to Ski oncogene ... 38 0.54 gi|1351069|sp|P49140|SKI_CHICK Ski oncogene (C-ski) 38 0.59 gi|6048269|emb|CAB58126.1| c-ski protein [Oreochromis aureus] 38 0.61 gi|104548|pir||B32575 C-ski protein FB28 - chicken 38 0.62 gi|21322226|ref|NP_035515.1| Sloan-Kettering viral oncogene homo... 38 0.68 gi|46329445|gb|AAH68305.1| Ski protein [Mus musculus] 37 0.78 >gi|8777406|dbj|BAA96996.1| unnamed protein product [Arabidopsis thaliana] Length = 574 Score = 650 bits (1678), Expect = 0.0 Identities = 342/486 (70%), Positives = 391/486 (80%), Gaps = 10/486 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DSMEQ NV HVSNAD+VS+RDIARERV++VAERMHRLPDEFL+ELK GL++ILEGN A Sbjct: 73 DSMEQTVNVMHHVSNADKVSVRDIARERVELVAERMHRLPDEFLDELKNGLKSILEGNVA 132 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQSR+DL+S TLV+AHRVQLEILVAINTGIQAFLHPNISLSQ SLIEI Sbjct: 133 QSVDEFMFLQKVVQSRTDLSSVTLVRAHRVQLEILVAINTGIQAFLHPNISLSQPSLIEI 192 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPADDC CDIC+N+KGFCNLCMC IC+KFDF+ NTCRWIGCD+CSH Sbjct: 193 FVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTCRWIGCDLCSH 252 Query: 181 WCHTDCAIREGLIKMGHSAK-GASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFE 239 W HTDCAIR+G I G SAK SG E++F C ACN TSEL G+VKDVFQHCAPNWD E Sbjct: 253 WTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRTSELLGWVKDVFQHCAPNWDRE 312 Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 +L+KELDFV +IFRGSED RG+KLFWK +ELI+K+K L + A ILMFFQE +SDS Sbjct: 313 SLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIKGGLAEA-TAAKLILMFFQEIESDS 371 Query: 300 P-SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED 358 S ENGEGG L+APQDACN IAEVVQ+T RKME+VAEEKMRMFKKAR L+ CDRELED Sbjct: 372 AKSFENGEGGRLMAPQDACNRIAEVVQETLRKMEIVAEEKMRMFKKARMALETCDRELED 431 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 KA V++LK ERQKKK QI+ELE IVRLKQAEADMFQLKA+EA+REA+ Sbjct: 432 KAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMDK 491 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDF-------DPMKMRMESEIRGLL 471 Y S YLK RLSEAE +QYLFE++K QENS+ DP ++ M S+IR LL Sbjct: 492 SEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRVASQSSGGGGDPSQVMMYSKIRDLL 551 Query: 472 KGMEMT 477 +G ++ Sbjct: 552 QGYNLS 557 >DUF1423_Q9LUB7_73-557_PF07227.1 Length = 485 Score = 640 bits (1650), Expect = 0.0 Identities = 342/486 (70%), Positives = 391/486 (80%), Gaps = 10/486 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DSMEQ NV HVSNAD+VS+RDIARERV++VAERMHRLPDEFL+ELK GL++ILEGN A Sbjct: 1 DSMEQTVNVMHHVSNADKVSVRDIARERVELVAERMHRLPDEFLDELKNGLKSILEGNVA 60 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQSR+DL+S TLV+AHRVQLEILVAINTGIQAFLHPNISLSQ SLIEI Sbjct: 61 QSVDEFMFLQKVVQSRTDLSSVTLVRAHRVQLEILVAINTGIQAFLHPNISLSQPSLIEI 120 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPADDC CDIC+N+KGFCNLCMC IC+KFDF+ NTCRWIGCD+CSH Sbjct: 121 FVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTCRWIGCDLCSH 180 Query: 181 WCHTDCAIREGLIKMGHSAK-GASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFE 239 W HTDCAIR+G I G SAK SG E++F C ACN TSEL G+VKDVFQHCAPNWD E Sbjct: 181 WTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRTSELLGWVKDVFQHCAPNWDRE 240 Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 +L+KELDFV +IFRGSED RG+KLFWK +ELI+K+K L + A ILMFFQE +SDS Sbjct: 241 SLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIKGGLAEA-TAAKLILMFFQEIESDS 299 Query: 300 P-SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED 358 S ENGEGG L+APQDACN IAEVVQ+T RKME+VAEEKMRMFKKAR L+ CDRELED Sbjct: 300 AKSFENGEGGRLMAPQDACNRIAEVVQETLRKMEIVAEEKMRMFKKARMALETCDRELED 359 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 KA V++LK ERQKKK QI+ELE IVRLKQAEADMFQLKA+EA+REA+ Sbjct: 360 KAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMDK 419 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDF-------DPMKMRMESEIRGLL 471 Y S YLK RLSEAE +QYLFE++K QENS+ DP ++ M S+IR LL Sbjct: 420 SEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRVASQSSGGGGDPSQVMMYSKIRDLL 479 Query: 472 KGMEMT 477 +G ++ Sbjct: 480 QGYNLS 485 >gi|6466960|gb|AAF13095.1| unknown protein [Arabidopsis thaliana] Length = 566 Score = 631 bits (1627), Expect = e-179 Identities = 332/474 (70%), Positives = 385/474 (81%), Gaps = 4/474 (0%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +Q +V RHVS AD+VSLRDIARER+D+VAERMHRLP+E+LEELK GL+AILEGNGA Sbjct: 74 DSHDQ--HVIRHVSIADKVSLRDIARERLDIVAERMHRLPEEYLEELKNGLKAILEGNGA 131 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQ+RSDLTS+TLV+AHRVQLE+LV INTGIQAFLHPNI+LSQSSLIEI Sbjct: 132 QPIDEFMFLQKFVQTRSDLTSKTLVRAHRVQLEVLVVINTGIQAFLHPNINLSQSSLIEI 191 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPAD C C+IC+N+KGFCNLCMCVIC+KFDFA NTCRWIGCDVCSH Sbjct: 192 FVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTCRWIGCDVCSH 251 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 W HTDCAIR+G I MG S K SGM EMLF C ACNHTSEL G+VKDVFQHCAPNWD E+ Sbjct: 252 WTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRES 311 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L+KELDFV +IFRGSED RG+KLFWK +EL+EK+K L + A ILMFFQE + DSP Sbjct: 312 LMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGGLAEA-TAAKLILMFFQEIELDSP 370 Query: 301 -SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK 359 SLE+GEGG IAPQDACN IAEVV++T RKME+V EEK RM+KKAR L+ C+RE+E+K Sbjct: 371 KSLESGEGGGTIAPQDACNRIAEVVKETLRKMEIVGEEKTRMYKKARMGLEECEREVEEK 430 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A V +L+MERQKKK QIEE+E IVRLKQAEA+MFQLKA+EA+ EAE Sbjct: 431 AKQVAELQMERQKKKQQIEEVERIVRLKQAEAEMFQLKANEAKVEAERLERIVKAKKEKT 490 Query: 420 XXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 Y S YLKLRLSEAE ++YLFE++K QE+ + + M S+IR +L G Sbjct: 491 EEEYASNYLKLRLSEAEAEKEYLFEKIKEQESGGNGGEASQAVMYSKIREMLHG 544 >DUF1423_Q9S736_74-548_PF07227.1 Length = 475 Score = 619 bits (1596), Expect = e-176 Identities = 332/474 (70%), Positives = 385/474 (81%), Gaps = 4/474 (0%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +Q +V RHVS AD+VSLRDIARER+D+VAERMHRLP+E+LEELK GL+AILEGNGA Sbjct: 1 DSHDQ--HVIRHVSIADKVSLRDIARERLDIVAERMHRLPEEYLEELKNGLKAILEGNGA 58 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQ+RSDLTS+TLV+AHRVQLE+LV INTGIQAFLHPNI+LSQSSLIEI Sbjct: 59 QPIDEFMFLQKFVQTRSDLTSKTLVRAHRVQLEVLVVINTGIQAFLHPNINLSQSSLIEI 118 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPAD C C+IC+N+KGFCNLCMCVIC+KFDFA NTCRWIGCDVCSH Sbjct: 119 FVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTCRWIGCDVCSH 178 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 W HTDCAIR+G I MG S K SGM EMLF C ACNHTSEL G+VKDVFQHCAPNWD E+ Sbjct: 179 WTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRES 238 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L+KELDFV +IFRGSED RG+KLFWK +EL+EK+K L + A ILMFFQE + DSP Sbjct: 239 LMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGGLAEA-TAAKLILMFFQEIELDSP 297 Query: 301 -SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK 359 SLE+GEGG IAPQDACN IAEVV++T RKME+V EEK RM+KKAR L+ C+RE+E+K Sbjct: 298 KSLESGEGGGTIAPQDACNRIAEVVKETLRKMEIVGEEKTRMYKKARMGLEECEREVEEK 357 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A V +L+MERQKKK QIEE+E IVRLKQAEA+MFQLKA+EA+ EAE Sbjct: 358 AKQVAELQMERQKKKQQIEEVERIVRLKQAEAEMFQLKANEAKVEAERLERIVKAKKEKT 417 Query: 420 XXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 Y S YLKLRLSEAE ++YLFE++K QE+ + + M S+IR +L G Sbjct: 418 EEEYASNYLKLRLSEAEAEKEYLFEKIKEQESGGNGGEASQAVMYSKIREMLHG 471 >gi|30385713|gb|AAP22955.1| Potyvirus VPg interacting protein [Pisum sativum] Length = 513 Score = 598 bits (1541), Expect = e-169 Identities = 321/469 (68%), Positives = 367/469 (78%), Gaps = 5/469 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R VS+AD +SL+DIARERVDV+ +RMHRLPDEFL+ELK GLRAILEG NG+Q +DEF Sbjct: 24 SVIRRVSSADRISLQDIARERVDVICDRMHRLPDEFLDELKNGLRAILEGGNGSQHRDEF 83 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 LQK VQSRSDLT++TL++AHRVQLEILV+INTGIQ FLHP+ISLSQ+SLIEIFLYKRC Sbjct: 84 FILQKLVQSRSDLTAKTLIRAHRVQLEILVSINTGIQGFLHPSISLSQTSLIEIFLYKRC 143 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIACQN LPAD+C D C+N GFCNLCMCVICSKFDF NTCRWIGCD+ SHW HTDC Sbjct: 144 RNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLXSHWTHTDC 203 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AIRE LI MG S K SG +EM+F C AC+ TS L G+VKDVFQHCAP+WD +ALI+ELD Sbjct: 204 AIREQLICMGPSVKSGSGPSEMVFRCQACSXTSXLLGWVKDVFQHCAPSWDGDALIRELD 263 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 FV +IF GS+D RG LFWK D+L EKLKS+ +D AC ILM FQE D D S SLEN Sbjct: 264 FVSRIFHGSKDQRGMNLFWKCDDLKEKLKSRKMDSKAACRAILMVFQELDLDNSKSLENA 323 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 E G LIAPQ+ACN IAEVVQ+ RKME VA+EKMRMFKKAR ++ACDREL DKA D Sbjct: 324 ESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARIAVEACDRELADKAREAGD 383 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LK+ERQKKK QIEELE IVRLK AEADMFQLKA+EA+REAE YTS Sbjct: 384 LKVERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTS 443 Query: 426 KYLKLRLSEAEERRQYLFEELKAQEN---SQCDFDPMKMRMESEIRGLL 471 YLK +LSEAE +QYL+E++K QE+ SQ DP M M S+I LL Sbjct: 444 NYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLL 492 >DUF1423_Q84N37_19-496_PF07227.1 Length = 478 Score = 595 bits (1535), Expect = e-169 Identities = 321/469 (68%), Positives = 367/469 (78%), Gaps = 5/469 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R VS+AD +SL+DIARERVDV+ +RMHRLPDEFL+ELK GLRAILEG NG+Q +DEF Sbjct: 6 SVIRRVSSADRISLQDIARERVDVICDRMHRLPDEFLDELKNGLRAILEGGNGSQHRDEF 65 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 LQK VQSRSDLT++TL++AHRVQLEILV+INTGIQ FLHP+ISLSQ+SLIEIFLYKRC Sbjct: 66 FILQKLVQSRSDLTAKTLIRAHRVQLEILVSINTGIQGFLHPSISLSQTSLIEIFLYKRC 125 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIACQN LPAD+C D C+N GFCNLCMCVICSKFDF NTCRWIGCD+ SHW HTDC Sbjct: 126 RNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLXSHWTHTDC 185 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AIRE LI MG S K SG +EM+F C AC+ TS L G+VKDVFQHCAP+WD +ALI+ELD Sbjct: 186 AIREQLICMGPSVKSGSGPSEMVFRCQACSXTSXLLGWVKDVFQHCAPSWDGDALIRELD 245 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 FV +IF GS+D RG LFWK D+L EKLKS+ +D AC ILM FQE D D S SLEN Sbjct: 246 FVSRIFHGSKDQRGMNLFWKCDDLKEKLKSRKMDSKAACRAILMVFQELDLDNSKSLENA 305 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 E G LIAPQ+ACN IAEVVQ+ RKME VA+EKMRMFKKAR ++ACDREL DKA D Sbjct: 306 ESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARIAVEACDRELADKAREAGD 365 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LK+ERQKKK QIEELE IVRLK AEADMFQLKA+EA+REAE YTS Sbjct: 366 LKVERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTS 425 Query: 426 KYLKLRLSEAEERRQYLFEELKAQEN---SQCDFDPMKMRMESEIRGLL 471 YLK +LSEAE +QYL+E++K QE+ SQ DP M M S+I LL Sbjct: 426 NYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLL 474 >gi|30385711|gb|AAP22954.1| Potyvirus VPg interacting protein [Nicotiana benthamiana] Length = 549 Score = 573 bits (1476), Expect = e-162 Identities = 306/475 (64%), Positives = 366/475 (77%), Gaps = 10/475 (2%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R++SN+D++SLRDIARERVDV+AERM LPDE+LE+ K LR ILEG GAQ ++EF Sbjct: 77 SVVRNISNSDKMSLRDIARERVDVIAERMRNLPDEYLEKFKHELRVILEGLGGAQHREEF 136 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 +FLQ+ V SR DLT TL+ HR QLEILVAI TGIQAFLHP++SLSQ+SLI+IFLYKRC Sbjct: 137 LFLQRLVNSRGDLTDGTLIITHRTQLEILVAIKTGIQAFLHPSVSLSQASLIDIFLYKRC 196 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIAC ++LPA++C C+IC+ K GFCNLCMCVIC KFDF N+CRWIGCD+CSHW HTDC Sbjct: 197 RNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGCDLCSHWTHTDC 256 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AI G I G S K + E LF C AC+ TSEL G+VKDVFQHCAP+WD EA ++ELD Sbjct: 257 AISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLGWVKDVFQHCAPSWDAEAFVRELD 316 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 +VR+IF+ SEDARG+KLFWK +ELIEKLK+ + DP+ AC IL FFQE D D S S +N Sbjct: 317 YVRRIFQRSEDARGRKLFWKCEELIEKLKNGVADPM-ACKVILSFFQELDVDPSKSQDND 375 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EGG LIAP++A N+IA+VVQ+ RKME VAEEKMRM KKAR LDACD+EL+DKA VT Sbjct: 376 EGGRLIAPEEAFNKIADVVQEAIRKMEAVAEEKMRMVKKARLALDACDQELKDKAREVTS 435 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LKMERQ+KK QI+ELESIVRLKQAEADMF LKA EARREAE Y S Sbjct: 436 LKMERQRKKQQIDELESIVRLKQAEADMFDLKAGEARREAERLQRIALAKTEKSEEDYAS 495 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQCD------FDPMKMRMESEIRGLLKGM 474 +YLK RLSEAE +QYLFE++K QE+S+ DP +M M S+I+ L+K M Sbjct: 496 RYLKQRLSEAEAEKQYLFEKIKLQESSRASQSSAGGNDPSQM-MYSKIQDLIKNM 549 >DUF1423_Q84N38_72-549_PF07227.1 Length = 478 Score = 568 bits (1464), Expect = e-160 Identities = 306/475 (64%), Positives = 366/475 (77%), Gaps = 10/475 (2%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R++SN+D++SLRDIARERVDV+AERM LPDE+LE+ K LR ILEG GAQ ++EF Sbjct: 6 SVVRNISNSDKMSLRDIARERVDVIAERMRNLPDEYLEKFKHELRVILEGLGGAQHREEF 65 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 +FLQ+ V SR DLT TL+ HR QLEILVAI TGIQAFLHP++SLSQ+SLI+IFLYKRC Sbjct: 66 LFLQRLVNSRGDLTDGTLIITHRTQLEILVAIKTGIQAFLHPSVSLSQASLIDIFLYKRC 125 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIAC ++LPA++C C+IC+ K GFCNLCMCVIC KFDF N+CRWIGCD+CSHW HTDC Sbjct: 126 RNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGCDLCSHWTHTDC 185 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AI G I G S K + E LF C AC+ TSEL G+VKDVFQHCAP+WD EA ++ELD Sbjct: 186 AISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLGWVKDVFQHCAPSWDAEAFVRELD 245 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 +VR+IF+ SEDARG+KLFWK +ELIEKLK+ + DP+ AC IL FFQE D D S S +N Sbjct: 246 YVRRIFQRSEDARGRKLFWKCEELIEKLKNGVADPM-ACKVILSFFQELDVDPSKSQDND 304 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EGG LIAP++A N+IA+VVQ+ RKME VAEEKMRM KKAR LDACD+EL+DKA VT Sbjct: 305 EGGRLIAPEEAFNKIADVVQEAIRKMEAVAEEKMRMVKKARLALDACDQELKDKAREVTS 364 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LKMERQ+KK QI+ELESIVRLKQAEADMF LKA EARREAE Y S Sbjct: 365 LKMERQRKKQQIDELESIVRLKQAEADMFDLKAGEARREAERLQRIALAKTEKSEEDYAS 424 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQCD------FDPMKMRMESEIRGLLKGM 474 +YLK RLSEAE +QYLFE++K QE+S+ DP +M M S+I+ L+K M Sbjct: 425 RYLKQRLSEAEAEKQYLFEKIKLQESSRASQSSAGGNDPSQM-MYSKIQDLIKNM 478 >gi|20148719|gb|AAM10250.1| unknown protein [Arabidopsis thaliana] Length = 733 Score = 414 bits (1065), Expect = e-114 Identities = 229/477 (48%), Positives = 298/477 (62%), Gaps = 33/477 (6%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 285 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 342 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 343 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 402 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 403 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 462 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 463 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 522 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF +S Sbjct: 523 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNYAES--- 579 Query: 301 SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA 360 I E + D R++ V AE R K SV + ++ + K+ Sbjct: 580 -------------------IPE-IPDPPRELTVAAETSYR--KDEASVTPSTSKDQKKKS 617 Query: 361 CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXX 420 A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 618 FALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKTEKME 671 Query: 421 XXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+T Sbjct: 672 EEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEVT 728 >gi|8778236|gb|AAF79245.1| F10B6.14 [Arabidopsis thaliana] Length = 760 Score = 412 bits (1060), Expect = e-114 Identities = 231/481 (48%), Positives = 302/481 (62%), Gaps = 14/481 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 285 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 342 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 343 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 402 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 403 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 462 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 463 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 522 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF S Sbjct: 523 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNCKFLIST 582 Query: 301 SLENGEGGF----LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 + F L++ A E + D R++ V AE R K SV + ++ Sbjct: 583 CIRFYRLKFDYILLLSQFLADAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQ 640 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 + K+ A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 641 KKKSFALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKT 694 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+ Sbjct: 695 EKMEEEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEV 754 Query: 477 T 477 T Sbjct: 755 T 755 >DUF1423_Q9LQV7_285-755_PF07227.1 Length = 471 Score = 398 bits (1022), Expect = e-109 Identities = 231/481 (48%), Positives = 302/481 (62%), Gaps = 14/481 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 1 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 58 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 59 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 118 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 119 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 178 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 179 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 238 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF S Sbjct: 239 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNCKFLIST 298 Query: 301 SLENGEGGF----LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 + F L++ A E + D R++ V AE R K SV + ++ Sbjct: 299 CIRFYRLKFDYILLLSQFLADAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQ 356 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 + K+ A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 357 KKKSFALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKT 410 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+ Sbjct: 411 EKMEEEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEV 470 Query: 477 T 477 T Sbjct: 471 T 471 >gi|28973711|gb|AAO64172.1| unknown protein [Arabidopsis thaliana] Length = 975 Score = 380 bits (977), Expect = e-104 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 514 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 571 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 572 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 631 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 632 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 691 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 692 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 751 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 752 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 809 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER-QKKKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 810 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 868 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 869 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 928 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 929 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 969 >gi|7573333|emb|CAB87803.1| putative protein [Arabidopsis thaliana] Length = 1162 Score = 375 bits (964), Expect = e-102 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 701 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 758 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 759 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 818 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 819 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 878 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 879 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 938 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 939 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 996 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER-QKKKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 997 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 1055 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 1056 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 1115 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 1116 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 1156 >DUF1423_Q84TI3_497-969_PF07227.1 Length = 473 Score = 367 bits (942), Expect = e-100 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 18 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 75 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 76 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 135 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 136 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 195 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 196 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 255 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 256 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 313 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER-QKKKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 314 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 372 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 373 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 432 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 433 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 473 >gi|33339558|gb|AAQ14302.1| ABRH1 [Marsilea quadrifolia] Length = 148 Score = 104 bits (260), Expect = 5e-21 Identities = 64/143 (44%), Positives = 86/143 (60%) Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 NE+ E ++ + V K+ K+R+VL D LEDK +L+ ER +K+ +I Sbjct: 5 NEVTEGQENLPKAAAAVGGSKLMEMDKSRAVLQNFDCNLEDKRPVAAELQFERARKRAEI 64 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE 437 E++ES+VR+KQAEA MFQ++ADEAR+EA +T KY KLRLSEAEE Sbjct: 65 EDIESVVRIKQAEAKMFQIRADEARKEAGGLQRIIVAKREKIEEDFTCKYKKLRLSEAEE 124 Query: 438 RRQYLFEELKAQENSQCDFDPMK 460 RRQ EEL+A EN+Q DF K Sbjct: 125 RRQKRLEELQALENAQNDFHKKK 147 >DUF1423_Q7X9D9_31-147_PF07227.1 Length = 117 Score = 95.5 bits (236), Expect = 3e-18 Identities = 59/117 (50%), Positives = 76/117 (64%) Query: 344 KARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 K+R+VL D LEDK +L+ ER +K+ +IE++ES+VR+KQAEA MFQ++ADEAR+ Sbjct: 1 KSRAVLQNFDCNLEDKRPVAAELQFERARKRAEIEDIESVVRIKQAEAKMFQIRADEARK 60 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMK 460 EA +T KY KLRLSEAEERRQ EEL+A EN+Q DF K Sbjct: 61 EAGGLQRIIVAKREKIEEDFTCKYKKLRLSEAEERRQKRLEELQALENAQNDFHKKK 117 >gi|40804910|gb|AAR91717.1| vernalization insensitive 3 [Arabidopsis thaliana] Length = 600 Score = 62.4 bits (150), Expect = 2e-08 Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 18/150 (12%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTD 185 C N+AC+ L DD FC C C IC KFD + W+ CD C CH + Sbjct: 110 CENLACRAALGCDDT----------FCRRCSCCICQKFDDNKDPSLWLTCDACGSSCHLE 159 Query: 186 CAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKEL 245 C +++ +G S + F+C C ++L G + + + L L Sbjct: 160 CGLKQDRYGIG------SDDLDGRFYCAYCGKDNDLLGCWRKQVKVAKETRRVDVLCYRL 213 Query: 246 DFVRKIFRGSEDARGKKLFWKADELIEKLK 275 +K+ RG+ R L DE ++KL+ Sbjct: 214 SLGQKLLRGTTKYR--NLLELMDEAVKKLE 241 >gi|14583098|gb|AAK69758.1| CDPK adapter protein 1 [Mesembryanthemum crystallinum] Length = 479 Score = 56.2 bits (134), Expect = 2e-06 Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 49/239 (20%) Query: 142 CDICSNKKGFCNLCMCVI-CSKFDFASNTCRWIGCD-------VCSHWCHTDCAIREGLI 193 CD+C ++ FC C C++ C+ D A +I C+ +C H H +CA+R Sbjct: 190 CDVCCSEPSFCRDCSCILCCNTIDLAYGGYSFIRCEAIVHDDVICGHAAHINCALRS--- 246 Query: 194 KMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFR 253 M + G+ G+ + ++C C+ ++L V + + C + + K L+ + R Sbjct: 247 YMAGTVGGSVGL-DTEYYCRRCDTRTDLTKHVTKLLKTCESIESRDDIEKMLNVASCLLR 305 Query: 254 GSEDARGKKLFWKADELIEKLK--SKLID--------------PLDACNFILMFFQECDS 297 GS+ ++L + ++KLK S L D LD N++ + D Sbjct: 306 GSQKKGSERLLNHIESALQKLKGGSDLQDVWKLEVDVMSLPTGQLDYTNYV-----QVDI 360 Query: 298 DSPSLENGEGGFLIAPQDAC----NEIAEVVQDTARKMEV---VAEEKMRMFKKARSVL 349 D +L + Q+ C EI +V+ + R EV +A+E++R K S L Sbjct: 361 DENNLSH---------QNECLKLEVEIDQVLHELRRSQEVEYRLAQERLRAQKDHLSSL 410 >gi|50942423|ref|XP_480739.1| putative coiled-coil protein [Oryza sativa (japonica cultivar-group)] Length = 630 Score = 53.9 bits (128), Expect = 8e-06 Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 20/142 (14%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCD--------V 177 CRN+ACQ L + D +C C C IC K+D + W+ C Sbjct: 129 CRNVACQATLNSGD----------AYCKRCSCCICHKYDENKDPSLWLVCSSDTPYSGYS 178 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWD 237 C CH CA++ K G G + ++ F+C+ C + L ++ + Sbjct: 179 CGTSCHLKCALKNK--KAGIFKNGCNKKSDGSFYCVWCGKMNWLMRNLRKQLAIARESRR 236 Query: 238 FEALIKELDFVRKIFRGSEDAR 259 + L + L K+ +GSE R Sbjct: 237 VDVLCERLSLTHKMVKGSERYR 258 >gi|9294095|dbj|BAB01947.1| unnamed protein product [Arabidopsis thaliana] Length = 602 Score = 53.5 bits (127), Expect = 1e-05 Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 29/170 (17%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC--------DV 177 C+N +C+ +P +D FC C C +C FD + W+ C + Sbjct: 49 CKNASCRANVPKED----------SFCKRCSCCVCHNFDENKDPSLWLVCEPEKSDDVEF 98 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWD 237 C CH +CA RE +K+G A G + F C +C S++ G K Sbjct: 99 CGLSCHIECAFRE--VKVGVIALGNLMKLDGCFCCYSCGKVSQILGCWKKQLVAAKEARR 156 Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID---PLDA 284 + L +D ++ G+ F + E++ KS L D PLD Sbjct: 157 RDGLCYRIDLGYRLLNGTSR------FSELHEIVRAAKSMLEDEVGPLDG 200 >gi|51535981|dbj|BAD38062.1| putative coiled-coil protein [Oryza sativa (japonica cultivar-group)] Length = 749 Score = 51.6 bits (122), Expect = 5e-05 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 20/106 (18%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC--------DV 177 C N+AC+ L +D FC C C IC K+D + W+ C D Sbjct: 143 CHNLACRATLNPED----------KFCRRCSCCICFKYDDNKDPSLWLFCSSDQPLQKDS 192 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFG 223 C CH +CA+++G + G G + ++C C ++L G Sbjct: 193 CVFSCHLECALKDG--RTGIMQSGQCKKLDGGYYCTRCRKQNDLLG 236 >gi|50918667|ref|XP_469730.1| unknown protein [Oryza sativa (japonica cultivar-group)] Length = 378 Score = 48.5 bits (114), Expect = 4e-04 Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 12/143 (8%) Query: 141 DCDICSNKKGFCNLCMCVICSK-FDFASNTCRWIGCD-------VCSHWCHTDCAIREGL 192 DCD+C FC C CV C + D++ +I C+ +C H H DCA+R Sbjct: 47 DCDLCCKMPDFCRECCCVFCRRVVDYSFGGYSYIKCEAVLEENKICGHIGHLDCALR--- 103 Query: 193 IKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIF 252 M + G + +M + C C++ + L V+ + C + + L+ + Sbjct: 104 TFMAGTVGGCIDL-DMQYCCRRCDNKTNLMLHVEKFLEICQSLQSRDDIEPILNTGLCLV 162 Query: 253 RGSEDARGKKLFWKADELIEKLK 275 RGS R K L + KLK Sbjct: 163 RGSRQTRAKSLESIMRSAMAKLK 185 >gi|51038197|gb|AAT94000.1| unknow protein [Oryza sativa (japonica cultivar-group)] Length = 607 Score = 46.6 bits (109), Expect = 0.002 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 25/111 (22%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC-------DVC 178 C+N+AC+ ++ ++D FC C C IC +FD + W+ C + C Sbjct: 53 CKNLACKAVVTSED----------SFCKRCSCCICHQFDDNKDPSLWLVCASENDDKNCC 102 Query: 179 SHWCHTDCAI---REGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVK 226 CH +CA+ R G +G+ + + + C +C S + G+ K Sbjct: 103 GSSCHIECALQHKRVGCFNLGNIIQ-----LDGSYSCASCGKVSGILGYWK 148 >gi|60547711|gb|AAX23819.1| hypothetical protein At2g18880 [Arabidopsis thaliana] Length = 529 Score = 44.7 bits (104), Expect = 0.005 Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 20/102 (19%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC--------DV 177 C+N+ACQN L + FC C C IC K+D + W+ C + Sbjct: 119 CQNLACQNKL----------REEATFCKRCSCCICFKYDDNKDPSLWLTCNSDSQFDGES 168 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTS 219 C CH +CA K G S + F+C++C T+ Sbjct: 169 CGLSCHLNCAFDSE--KSGLKEDTPSSDIDGCFNCVSCGKTN 208 >gi|50759355|ref|XP_425739.1| PREDICTED: similar to C-ski protein FB28 - chicken [Gallus gallus] Length = 2940 Score = 40.8 bits (94), Expect = 0.073 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 18/109 (16%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 2808 VAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVCDKGCE 2867 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 2868 AGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 2911 >gi|71996161|ref|NP_001022955.1| Y79H2A.3a [Caenorhabditis elegans] Length = 2129 Score = 40.8 bits (94), Expect = 0.086 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 19/111 (17%) Query: 313 PQDACNEIAEVVQDTARKM-----EVVAEEKMRMFKKARSVL-----------DACDREL 356 P+D C ++ + + + RK ++ AEEK R +A+ L +A REL Sbjct: 1030 PEDYCIKVYDPIGEEERKQFAILAKIQAEEKQRRLDEAKEKLAIDKEKLRLKKEALQREL 1089 Query: 357 EDKACAVTDLKM---ERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 E++ A KM ER ++K + ++ E RL+ A+ + +L A EA+++ Sbjct: 1090 EERNKAERQKKMDDEERHREKERQKKAERDARLQFAKENAAKLAAQEAKKD 1140 >gi|18859373|ref|NP_571010.1| nuclear oncoprotein skia [Danio rerio] Length = 727 Score = 40.4 bits (93), Expect = 0.10 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 13/100 (13%) Query: 312 APQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQ 371 A ++ EI + ++ RKM E +MR+ R + A + DK C L R Sbjct: 604 AKRNLRKEIERLRAESERKMREANESRMRL---KRELEQARQLRVCDKGCEAGRL---RA 657 Query: 372 KKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 658 KYSAQIEDLQ--VKLQHAEADREQLRADLIHEREAREHLE 695 >gi|66359990|ref|XP_627173.1| multidomain chromatinic protein [Cryptosporidium parvum] Length = 2244 Score = 38.5 bits (88), Expect = 0.38 Identities = 16/38 (42%), Positives = 19/38 (50%) Query: 149 KGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 KGF C IC K +S W+ CD+C W H DC Sbjct: 604 KGFERGQFCSICRKIWTSSWEGEWLQCDICKFWVHYDC 641 >gi|4506967|ref|NP_003027.1| v-ski sarcoma viral oncogene homolog [Homo sapiens] Length = 728 Score = 38.5 bits (88), Expect = 0.40 Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 14/104 (13%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 596 VAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRLRLKRELEQARQARVCDKGCE 655 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR-REA 405 L R K QIE+L+ V+L+ AEAD QL+AD R REA Sbjct: 656 AGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLLREREA 694 >gi|104547|pir||C32575 C-ski protein FB27 - chicken Length = 649 Score = 38.5 bits (88), Expect = 0.42 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 18/109 (16%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 517 VAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVCDKGCE 576 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 577 AGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 620 >gi|68299728|ref|YP_249577.1| RNA polymerase [Vibriophage VP4] Length = 883 Score = 38.1 bits (87), Expect = 0.46 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%) Query: 296 DSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRE 355 D+ P+++NG+G P AC +A+++ D K V A E M+ + A ++ + E Sbjct: 653 DTVMPAIDNGKGTMFTEPSQACRFMAKLIWDAVSKTVVAAVEAMQWLQSAAKLVSS---E 709 Query: 356 LEDK 359 ++DK Sbjct: 710 VKDK 713 >gi|73956613|ref|XP_546730.2| PREDICTED: similar to Ski oncogene (C-ski) [Canis familiaris] Length = 790 Score = 38.1 bits (87), Expect = 0.54 Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 14/104 (13%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E ++ +++E + E + ++A RELE DK C Sbjct: 658 VAKKEKLREATEAKRNLRKEIERLRAENEKKMREANESRLRLKRELEQARQVRVCDKGCE 717 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR-REA 405 L R K QIE+L+ V+L+ AEAD QL+AD R REA Sbjct: 718 AGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLLREREA 756 >gi|1351069|sp|P49140|SKI_CHICK Ski oncogene (C-ski) Length = 750 Score = 38.1 bits (87), Expect = 0.59 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 18/109 (16%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 618 VAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVCDKGCE 677 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 678 AGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 721 >gi|6048269|emb|CAB58126.1| c-ski protein [Oreochromis aureus] Length = 714 Score = 37.7 bits (86), Expect = 0.61 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 599 VAKKEKLREATEAKRNLRKEIERLRAESEKKMKEANESRIRLKRELEQARQLRVCDKGCE 658 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L+ ++L+ AEAD QL+AD EAR E Sbjct: 659 AGRL---RAKYSAQIEDLQ--MKLQHAEADREQLRADLLHEREAREHLE 702 >gi|104548|pir||B32575 C-ski protein FB28 - chicken Length = 713 Score = 37.7 bits (86), Expect = 0.62 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 18/109 (16%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 581 VAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVCDKGCE 640 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 641 AGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 684 >gi|21322226|ref|NP_035515.1| Sloan-Kettering viral oncogene homolog [Mus musculus] Length = 725 Score = 37.7 bits (86), Expect = 0.68 Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 14/104 (13%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 593 VAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRVRLKRELEQARQVRVCDKGCE 652 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR-REA 405 L R K Q+E+L++ +L+ AEAD QL+AD R REA Sbjct: 653 AGRL---RAKYSAQVEDLQA--KLQHAEADREQLRADLLREREA 691 >gi|46329445|gb|AAH68305.1| Ski protein [Mus musculus] Length = 675 Score = 37.4 bits (85), Expect = 0.78 Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 14/104 (13%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E + +++E + E + K+A RELE DK C Sbjct: 543 VAKKEKLREATEAKRSLRKEIERLRAENEKKMKEANESRVRLKRELEQARQVRVCDKGCE 602 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR-REA 405 L R K QIE+L++ +L+ AEAD QL+AD R REA Sbjct: 603 AGRL---RAKYSAQIEDLQA--KLQHAEADREQLRADLLREREA 641 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|8777406|dbj|BAA96996.1| unnamed protein product [Arabidopsis ... 721 0.0 gi|6466960|gb|AAF13095.1| unknown protein [Arabidopsis thaliana] 710 0.0 DUF1423_Q9LUB7_73-557_PF07227.1 708 0.0 DUF1423_Q9S736_74-548_PF07227.1 696 0.0 gi|30385713|gb|AAP22955.1| Potyvirus VPg interacting protein [Pi... 679 0.0 DUF1423_Q84N37_19-496_PF07227.1 674 0.0 gi|30385711|gb|AAP22954.1| Potyvirus VPg interacting protein [Ni... 664 0.0 DUF1423_Q84N38_72-549_PF07227.1 658 0.0 gi|8778236|gb|AAF79245.1| F10B6.14 [Arabidopsis thaliana] 654 0.0 gi|20148719|gb|AAM10250.1| unknown protein [Arabidopsis thaliana] 631 e-180 DUF1423_Q9LQV7_285-755_PF07227.1 627 e-178 gi|28973711|gb|AAO64172.1| unknown protein [Arabidopsis thaliana] 584 e-165 gi|7573333|emb|CAB87803.1| putative protein [Arabidopsis thaliana] 575 e-163 DUF1423_Q84TI3_497-969_PF07227.1 558 e-157 gi|14583098|gb|AAK69758.1| CDPK adapter protein 1 [Mesembryanthe... 205 2e-51 gi|40804910|gb|AAR91717.1| vernalization insensitive 3 [Arabidop... 190 7e-47 gi|9294095|dbj|BAB01947.1| unnamed protein product [Arabidopsis ... 187 6e-46 gi|50942423|ref|XP_480739.1| putative coiled-coil protein [Oryza... 179 2e-43 gi|51535981|dbj|BAD38062.1| putative coiled-coil protein [Oryza ... 177 5e-43 gi|50918667|ref|XP_469730.1| unknown protein [Oryza sativa (japo... 173 9e-42 gi|33339558|gb|AAQ14302.1| ABRH1 [Marsilea quadrifolia] 173 1e-41 gi|51038197|gb|AAT94000.1| unknow protein [Oryza sativa (japonic... 158 3e-37 gi|60547711|gb|AAX23819.1| hypothetical protein At2g18880 [Arabi... 144 6e-33 DUF1423_Q7X9D9_31-147_PF07227.1 142 2e-32 Sequences not found previously or not previously below threshold: gi|7269920|emb|CAB81013.1| putative protein [Arabidopsis thaliana] 130 8e-29 gi|8778731|gb|AAF79739.1| T25N20.6 [Arabidopsis thaliana] 113 1e-23 gi|18859373|ref|NP_571010.1| nuclear oncoprotein skia [Danio rerio] 49 2e-04 gi|68351395|gb|EAN32158.1| hypothetical protein, conserved [Thei... 48 5e-04 gi|50759355|ref|XP_425739.1| PREDICTED: similar to C-ski protein... 47 8e-04 gi|73956613|ref|XP_546730.2| PREDICTED: similar to Ski oncogene ... 46 0.002 gi|158818|gb|AAA29025.1| zinc-binding protein 46 0.002 gi|1052593|emb|CAA90513.1| trithorax protein trxII [Drosophila m... 46 0.002 gi|23494457|dbj|BAC19423.1| putative endopeptidase Clp ATP-bindi... 46 0.002 gi|4506967|ref|NP_003027.1| v-ski sarcoma viral oncogene homolog... 46 0.003 gi|41326957|emb|CAF20801.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 45 0.004 gi|6048269|emb|CAB58126.1| c-ski protein [Oreochromis aureus] 44 0.008 gi|34904048|ref|NP_913371.1| P0489G09.12 [Oryza sativa (japonica... 44 0.009 gi|65304433|emb|CAI76812.1| hypothetical protein, conserved [The... 44 0.009 gi|21322226|ref|NP_035515.1| Sloan-Kettering viral oncogene homo... 44 0.009 gi|29029074|gb|AAO64916.1| At5g53430 [Arabidopsis thaliana] 44 0.010 gi|68357652|ref|XP_693359.1| PREDICTED: similar to fetal Alzheim... 44 0.010 gi|73979825|ref|XP_858425.1| PREDICTED: similar to intersectin 2... 43 0.015 gi|60491828|emb|CAH06586.1| conserved hypothetical protein [Bact... 43 0.015 gi|46329445|gb|AAH68305.1| Ski protein [Mus musculus] 43 0.015 gi|1351069|sp|P49140|SKI_CHICK Ski oncogene (C-ski) 43 0.016 gi|73979827|ref|XP_532890.2| PREDICTED: similar to intersectin 2... 43 0.018 gi|104548|pir||B32575 C-ski protein FB28 - chicken 43 0.018 gi|67517511|ref|XP_658590.1| hypothetical protein AN0986.2 [Aspe... 42 0.025 gi|6048267|emb|CAB58125.1| c-ski protein [Oreochromis aureus] 42 0.025 gi|66359990|ref|XP_627173.1| multidomain chromatinic protein [Cr... 42 0.033 gi|62650161|ref|XP_233731.3| PREDICTED: similar to Ski protein [... 42 0.036 gi|13814451|gb|AAK41495.1| Microtubule binding protein, putative... 42 0.041 gi|104547|pir||C32575 C-ski protein FB27 - chicken 41 0.054 gi|47229652|emb|CAG06848.1| unnamed protein product [Tetraodon n... 41 0.058 gi|47228511|emb|CAG05331.1| unnamed protein product [Tetraodon n... 41 0.059 gi|73974720|ref|XP_857253.1| PREDICTED: similar to plectin 1 iso... 41 0.060 gi|34904046|ref|NP_913370.1| P0489G09.11 [Oryza sativa (japonica... 41 0.080 gi|71987479|ref|NP_001022117.1| F26H11.2c [Caenorhabditis elegans] 41 0.085 gi|50312549|ref|XP_456310.1| unnamed protein product [Kluyveromy... 41 0.087 gi|47217567|emb|CAG02494.1| unnamed protein product [Tetraodon n... 41 0.090 gi|71748844|ref|XP_823477.1| hypothetical protein Tb10.389.0860 ... 41 0.095 gi|55631422|ref|XP_520008.1| PREDICTED: plectin 1 [Pan troglodytes] 41 0.097 gi|74002007|ref|XP_535623.2| PREDICTED: similar to Fraser syndro... 41 0.099 gi|71987483|ref|NP_001022118.1| F26H11.2d [Caenorhabditis elegans] 40 0.13 gi|42565848|ref|NP_190778.2| PHD finger family protein [Arabidop... 40 0.14 gi|47223942|emb|CAG06119.1| unnamed protein product [Tetraodon n... 40 0.15 gi|73964054|ref|XP_547990.2| PREDICTED: similar to CDC42-binding... 40 0.16 gi|6648214|gb|AAF21212.1| unknown protein [Arabidopsis thaliana] 40 0.16 gi|41409951|ref|NP_962787.1| ClpB [Mycobacterium avium subsp. pa... 40 0.17 gi|71076302|ref|XP_770671.1| hypothetical protein GLP_159_63855_... 40 0.17 gi|50946359|ref|XP_482707.1| fiber protein-like [Oryza sativa (j... 39 0.19 gi|47229818|emb|CAG07014.1| unnamed protein product [Tetraodon n... 39 0.19 gi|47219426|emb|CAG10790.1| unnamed protein product [Tetraodon n... 39 0.21 gi|56784088|dbj|BAD81417.1| putative trithorax 3 [Oryza sativa (... 39 0.21 gi|73964058|ref|XP_868606.1| PREDICTED: similar to Cdc42 binding... 39 0.21 gi|26348883|dbj|BAC38081.1| unnamed protein product [Mus musculus] 39 0.22 gi|40849896|gb|AAR95660.1| plectin 6 [Rattus norvegicus] 39 0.23 gi|47225576|emb|CAG12059.1| unnamed protein product [Tetraodon n... 39 0.25 gi|71987502|ref|NP_001022121.1| F26H11.2g [Caenorhabditis elegans] 39 0.25 gi|28950021|emb|CAD70776.1| probable kinesin-related protein KLP... 39 0.27 gi|71414808|ref|XP_809492.1| vesicular transport-associated repe... 39 0.27 gi|47228685|emb|CAG07417.1| unnamed protein product [Tetraodon n... 39 0.28 gi|23481616|gb|EAA17840.1| Bromodomain, putative [Plasmodium yoe... 39 0.28 gi|42567196|ref|NP_194520.3| PHD finger protein-related / SET do... 39 0.29 gi|66850677|gb|EAL91004.1| PHD-finger domain protein [Aspergillu... 39 0.29 gi|3540281|gb|AAC34383.1| All-1 related protein [Takifugu rubripes] 39 0.29 gi|3367791|emb|CAA20056.1| SPBC1685.08 [Schizosaccharomyces pombe] 39 0.30 gi|50233868|ref|NP_055771.3| hypothetical protein LOC22897 [Homo... 39 0.31 gi|71987495|ref|NP_001022120.1| F26H11.2f [Caenorhabditis elegans] 39 0.31 gi|62642163|ref|XP_219801.3| PREDICTED: similar to Np95-like rin... 39 0.32 gi|33151758|ref|NP_873111.1| ATP-dependant Clp protease chain B ... 39 0.33 gi|3763931|gb|AAC64311.1| hypothetical protein [Arabidopsis thal... 39 0.33 gi|66847177|gb|EAL87508.1| conserved hypothetical protein [Asper... 39 0.35 gi|7294443|gb|AAF49788.1| CG9206-PA [Drosophila melanogaster] 39 0.35 gi|71412527|ref|XP_808444.1| hypothetical protein, conserved [Tr... 39 0.36 gi|50789970|ref|XP_423552.1| PREDICTED: similar to Myeloid/lymph... 39 0.40 PHD_Q8GZ42_415-469_PF00628.16 38 0.42 gi|23485476|gb|EAA20445.1| hypothetical protein [Plasmodium yoel... 38 0.42 gi|62657239|ref|XP_221050.3| PREDICTED: similar to fetal Alzheim... 38 0.44 gi|50749859|ref|XP_421787.1| PREDICTED: similar to eukaryotic tr... 38 0.48 gi|68403377|ref|XP_689156.1| PREDICTED: similar to myeloid/lymph... 38 0.49 gi|68070837|ref|XP_677332.1| SET-domain protein, putative [Plasm... 38 0.50 gi|66362080|ref|XP_628004.1| chromatin protein with an AT hook a... 38 0.50 gi|50256336|gb|EAL19061.1| hypothetical protein CNBH1630 [Crypto... 38 0.51 gi|2266904|gb|AAC24651.1| hypothetical protein, conserved [Leish... 38 0.55 gi|73970968|ref|XP_864358.1| PREDICTED: similar to Np95-like rin... 38 0.56 gi|42631176|ref|ZP_00156714.1| COG0542: ATPases with chaperone a... 38 0.58 gi|73970972|ref|XP_864401.1| PREDICTED: similar to Np95-like rin... 38 0.59 gi|16265798|gb|AAL16644.1| nucleosome remodeling factor large su... 38 0.59 gi|68245567|gb|EAN27687.1| TonB, C-terminal [Magnetococcus sp. M... 38 0.59 gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone a... 38 0.60 gi|73970976|ref|XP_531928.2| PREDICTED: similar to Ubiquitin-lik... 38 0.60 gi|23612374|ref|NP_703954.1| SET-domain protein, putative [Plasm... 38 0.60 gi|23092680|gb|AAF47361.2| CG32346-PB, isoform B [Drosophila mel... 38 0.61 gi|50551621|ref|XP_503285.1| hypothetical protein [Yarrowia lipo... 38 0.61 gi|34785071|gb|AAH56775.1| Hypothetical protein MGC63512 [Danio ... 38 0.62 gi|60101451|gb|AAX13804.1| guanylate binding protein 1 [Cercopit... 38 0.62 gi|62739288|gb|AAH94105.1| LOC432234 protein [Xenopus laevis] 38 0.66 gi|50294766|ref|XP_449794.1| unnamed protein product [Candida gl... 38 0.70 gi|2351219|dbj|BAA22067.1| myosin heavy chain [Cyprinus carpio] 37 0.76 gi|66847357|gb|EAL87688.1| PHD finger and JmjC domain protein, p... 37 0.78 PHD_Q5BEP4_671-718_PF00628.16 37 0.82 gi|66526707|ref|XP_624402.1| PREDICTED: similar to CG6129-PB, is... 37 0.91 gi|68360534|ref|XP_695735.1| PREDICTED: similar to pleckstrin ho... 37 0.91 gi|73979823|ref|XP_849291.1| PREDICTED: similar to Intersectin 2... 37 0.94 >gi|8777406|dbj|BAA96996.1| unnamed protein product [Arabidopsis thaliana] Length = 574 Score = 721 bits (1862), Expect = 0.0 Identities = 342/486 (70%), Positives = 391/486 (80%), Gaps = 10/486 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DSMEQ NV HVSNAD+VS+RDIARERV++VAERMHRLPDEFL+ELK GL++ILEGN A Sbjct: 73 DSMEQTVNVMHHVSNADKVSVRDIARERVELVAERMHRLPDEFLDELKNGLKSILEGNVA 132 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQSR+DL+S TLV+AHRVQLEILVAINTGIQAFLHPNISLSQ SLIEI Sbjct: 133 QSVDEFMFLQKVVQSRTDLSSVTLVRAHRVQLEILVAINTGIQAFLHPNISLSQPSLIEI 192 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPADDC CDIC+N+KGFCNLCMC IC+KFDF+ NTCRWIGCD+CSH Sbjct: 193 FVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTCRWIGCDLCSH 252 Query: 181 WCHTDCAIREGLIKMGHSAKGA-SGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFE 239 W HTDCAIR+G I G SAK SG E++F C ACN TSEL G+VKDVFQHCAPNWD E Sbjct: 253 WTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRTSELLGWVKDVFQHCAPNWDRE 312 Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 +L+KELDFV +IFRGSED RG+KLFWK +ELI+K+K L + A ILMFFQE +SDS Sbjct: 313 SLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIKGGLAEA-TAAKLILMFFQEIESDS 371 Query: 300 -PSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED 358 S ENGEGG L+APQDACN IAEVVQ+T RKME+VAEEKMRMFKKAR L+ CDRELED Sbjct: 372 AKSFENGEGGRLMAPQDACNRIAEVVQETLRKMEIVAEEKMRMFKKARMALETCDRELED 431 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 KA V++LK ERQKKK QI+ELE IVRLKQAEADMFQLKA+EA+REA+ Sbjct: 432 KAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMDK 491 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC-------DFDPMKMRMESEIRGLL 471 Y S YLK RLSEAE +QYLFE++K QENS+ DP ++ M S+IR LL Sbjct: 492 SEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRVASQSSGGGGDPSQVMMYSKIRDLL 551 Query: 472 KGMEMT 477 +G ++ Sbjct: 552 QGYNLS 557 >gi|6466960|gb|AAF13095.1| unknown protein [Arabidopsis thaliana] Length = 566 Score = 710 bits (1834), Expect = 0.0 Identities = 332/478 (69%), Positives = 386/478 (80%), Gaps = 4/478 (0%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +Q +V RHVS AD+VSLRDIARER+D+VAERMHRLP+E+LEELK GL+AILEGNGA Sbjct: 74 DSHDQ--HVIRHVSIADKVSLRDIARERLDIVAERMHRLPEEYLEELKNGLKAILEGNGA 131 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQ+RSDLTS+TLV+AHRVQLE+LV INTGIQAFLHPNI+LSQSSLIEI Sbjct: 132 QPIDEFMFLQKFVQTRSDLTSKTLVRAHRVQLEVLVVINTGIQAFLHPNINLSQSSLIEI 191 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPAD C C+IC+N+KGFCNLCMCVIC+KFDFA NTCRWIGCDVCSH Sbjct: 192 FVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTCRWIGCDVCSH 251 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 W HTDCAIR+G I MG S K SGM EMLF C ACNHTSEL G+VKDVFQHCAPNWD E+ Sbjct: 252 WTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRES 311 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L+KELDFV +IFRGSED RG+KLFWK +EL+EK+K L + A ILMFFQE + DSP Sbjct: 312 LMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGGLAEA-TAAKLILMFFQEIELDSP 370 Query: 301 -SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK 359 SLE+GEGG IAPQDACN IAEVV++T RKME+V EEK RM+KKAR L+ C+RE+E+K Sbjct: 371 KSLESGEGGGTIAPQDACNRIAEVVKETLRKMEIVGEEKTRMYKKARMGLEECEREVEEK 430 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A V +L+MERQKKK QIEE+E IVRLKQAEA+MFQLKA+EA+ EAE Sbjct: 431 AKQVAELQMERQKKKQQIEEVERIVRLKQAEAEMFQLKANEAKVEAERLERIVKAKKEKT 490 Query: 420 XXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 Y S YLKLRLSEAE ++YLFE++K QE+ + + M S+IR +L G + Sbjct: 491 EEEYASNYLKLRLSEAEAEKEYLFEKIKEQESGGNGGEASQAVMYSKIREMLHGYNAS 548 >DUF1423_Q9LUB7_73-557_PF07227.1 Length = 485 Score = 708 bits (1829), Expect = 0.0 Identities = 342/486 (70%), Positives = 391/486 (80%), Gaps = 10/486 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DSMEQ NV HVSNAD+VS+RDIARERV++VAERMHRLPDEFL+ELK GL++ILEGN A Sbjct: 1 DSMEQTVNVMHHVSNADKVSVRDIARERVELVAERMHRLPDEFLDELKNGLKSILEGNVA 60 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQSR+DL+S TLV+AHRVQLEILVAINTGIQAFLHPNISLSQ SLIEI Sbjct: 61 QSVDEFMFLQKVVQSRTDLSSVTLVRAHRVQLEILVAINTGIQAFLHPNISLSQPSLIEI 120 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPADDC CDIC+N+KGFCNLCMC IC+KFDF+ NTCRWIGCD+CSH Sbjct: 121 FVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTCRWIGCDLCSH 180 Query: 181 WCHTDCAIREGLIKMGHSAKGA-SGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFE 239 W HTDCAIR+G I G SAK SG E++F C ACN TSEL G+VKDVFQHCAPNWD E Sbjct: 181 WTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRTSELLGWVKDVFQHCAPNWDRE 240 Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 +L+KELDFV +IFRGSED RG+KLFWK +ELI+K+K L + A ILMFFQE +SDS Sbjct: 241 SLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIKGGLAEA-TAAKLILMFFQEIESDS 299 Query: 300 -PSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED 358 S ENGEGG L+APQDACN IAEVVQ+T RKME+VAEEKMRMFKKAR L+ CDRELED Sbjct: 300 AKSFENGEGGRLMAPQDACNRIAEVVQETLRKMEIVAEEKMRMFKKARMALETCDRELED 359 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 KA V++LK ERQKKK QI+ELE IVRLKQAEADMFQLKA+EA+REA+ Sbjct: 360 KAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMDK 419 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC-------DFDPMKMRMESEIRGLL 471 Y S YLK RLSEAE +QYLFE++K QENS+ DP ++ M S+IR LL Sbjct: 420 SEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRVASQSSGGGGDPSQVMMYSKIRDLL 479 Query: 472 KGMEMT 477 +G ++ Sbjct: 480 QGYNLS 485 >DUF1423_Q9S736_74-548_PF07227.1 Length = 475 Score = 696 bits (1798), Expect = 0.0 Identities = 332/478 (69%), Positives = 386/478 (80%), Gaps = 4/478 (0%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +Q +V RHVS AD+VSLRDIARER+D+VAERMHRLP+E+LEELK GL+AILEGNGA Sbjct: 1 DSHDQ--HVIRHVSIADKVSLRDIARERLDIVAERMHRLPEEYLEELKNGLKAILEGNGA 58 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQ+RSDLTS+TLV+AHRVQLE+LV INTGIQAFLHPNI+LSQSSLIEI Sbjct: 59 QPIDEFMFLQKFVQTRSDLTSKTLVRAHRVQLEVLVVINTGIQAFLHPNINLSQSSLIEI 118 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPAD C C+IC+N+KGFCNLCMCVIC+KFDFA NTCRWIGCDVCSH Sbjct: 119 FVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTCRWIGCDVCSH 178 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 W HTDCAIR+G I MG S K SGM EMLF C ACNHTSEL G+VKDVFQHCAPNWD E+ Sbjct: 179 WTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRES 238 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L+KELDFV +IFRGSED RG+KLFWK +EL+EK+K L + A ILMFFQE + DSP Sbjct: 239 LMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGGLAEA-TAAKLILMFFQEIELDSP 297 Query: 301 -SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK 359 SLE+GEGG IAPQDACN IAEVV++T RKME+V EEK RM+KKAR L+ C+RE+E+K Sbjct: 298 KSLESGEGGGTIAPQDACNRIAEVVKETLRKMEIVGEEKTRMYKKARMGLEECEREVEEK 357 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A V +L+MERQKKK QIEE+E IVRLKQAEA+MFQLKA+EA+ EAE Sbjct: 358 AKQVAELQMERQKKKQQIEEVERIVRLKQAEAEMFQLKANEAKVEAERLERIVKAKKEKT 417 Query: 420 XXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 Y S YLKLRLSEAE ++YLFE++K QE+ + + M S+IR +L G + Sbjct: 418 EEEYASNYLKLRLSEAEAEKEYLFEKIKEQESGGNGGEASQAVMYSKIREMLHGYNAS 475 >gi|30385713|gb|AAP22955.1| Potyvirus VPg interacting protein [Pisum sativum] Length = 513 Score = 679 bits (1752), Expect = 0.0 Identities = 321/471 (68%), Positives = 367/471 (77%), Gaps = 5/471 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R VS+AD +SL+DIARERVDV+ +RMHRLPDEFL+ELK GLRAILEG NG+Q +DEF Sbjct: 24 SVIRRVSSADRISLQDIARERVDVICDRMHRLPDEFLDELKNGLRAILEGGNGSQHRDEF 83 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 LQK VQSRSDLT++TL++AHRVQLEILV+INTGIQ FLHP+ISLSQ+SLIEIFLYKRC Sbjct: 84 FILQKLVQSRSDLTAKTLIRAHRVQLEILVSINTGIQGFLHPSISLSQTSLIEIFLYKRC 143 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIACQN LPAD+C D C+N GFCNLCMCVICSKFDF NTCRWIGCD+ SHW HTDC Sbjct: 144 RNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLXSHWTHTDC 203 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AIRE LI MG S K SG +EM+F C AC+ TS L G+VKDVFQHCAP+WD +ALI+ELD Sbjct: 204 AIREQLICMGPSVKSGSGPSEMVFRCQACSXTSXLLGWVKDVFQHCAPSWDGDALIRELD 263 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 FV +IF GS+D RG LFWK D+L EKLKS+ +D AC ILM FQE D D S SLEN Sbjct: 264 FVSRIFHGSKDQRGMNLFWKCDDLKEKLKSRKMDSKAACRAILMVFQELDLDNSKSLENA 323 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 E G LIAPQ+ACN IAEVVQ+ RKME VA+EKMRMFKKAR ++ACDREL DKA D Sbjct: 324 ESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARIAVEACDRELADKAREAGD 383 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LK+ERQKKK QIEELE IVRLK AEADMFQLKA+EA+REAE YTS Sbjct: 384 LKVERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTS 443 Query: 426 KYLKLRLSEAEERRQYLFEELKAQEN---SQCDFDPMKMRMESEIRGLLKG 473 YLK +LSEAE +QYL+E++K QE+ SQ DP M M S+I LL Sbjct: 444 NYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLLYN 494 >DUF1423_Q84N37_19-496_PF07227.1 Length = 478 Score = 674 bits (1740), Expect = 0.0 Identities = 321/471 (68%), Positives = 367/471 (77%), Gaps = 5/471 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R VS+AD +SL+DIARERVDV+ +RMHRLPDEFL+ELK GLRAILEG NG+Q +DEF Sbjct: 6 SVIRRVSSADRISLQDIARERVDVICDRMHRLPDEFLDELKNGLRAILEGGNGSQHRDEF 65 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 LQK VQSRSDLT++TL++AHRVQLEILV+INTGIQ FLHP+ISLSQ+SLIEIFLYKRC Sbjct: 66 FILQKLVQSRSDLTAKTLIRAHRVQLEILVSINTGIQGFLHPSISLSQTSLIEIFLYKRC 125 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIACQN LPAD+C D C+N GFCNLCMCVICSKFDF NTCRWIGCD+ SHW HTDC Sbjct: 126 RNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLXSHWTHTDC 185 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AIRE LI MG S K SG +EM+F C AC+ TS L G+VKDVFQHCAP+WD +ALI+ELD Sbjct: 186 AIREQLICMGPSVKSGSGPSEMVFRCQACSXTSXLLGWVKDVFQHCAPSWDGDALIRELD 245 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 FV +IF GS+D RG LFWK D+L EKLKS+ +D AC ILM FQE D D S SLEN Sbjct: 246 FVSRIFHGSKDQRGMNLFWKCDDLKEKLKSRKMDSKAACRAILMVFQELDLDNSKSLENA 305 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 E G LIAPQ+ACN IAEVVQ+ RKME VA+EKMRMFKKAR ++ACDREL DKA D Sbjct: 306 ESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARIAVEACDRELADKAREAGD 365 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LK+ERQKKK QIEELE IVRLK AEADMFQLKA+EA+REAE YTS Sbjct: 366 LKVERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTS 425 Query: 426 KYLKLRLSEAEERRQYLFEELKAQEN---SQCDFDPMKMRMESEIRGLLKG 473 YLK +LSEAE +QYL+E++K QE+ SQ DP M M S+I LL Sbjct: 426 NYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLLYN 476 >gi|30385711|gb|AAP22954.1| Potyvirus VPg interacting protein [Nicotiana benthamiana] Length = 549 Score = 664 bits (1714), Expect = 0.0 Identities = 306/475 (64%), Positives = 366/475 (77%), Gaps = 10/475 (2%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R++SN+D++SLRDIARERVDV+AERM LPDE+LE+ K LR ILEG GAQ ++EF Sbjct: 77 SVVRNISNSDKMSLRDIARERVDVIAERMRNLPDEYLEKFKHELRVILEGLGGAQHREEF 136 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 +FLQ+ V SR DLT TL+ HR QLEILVAI TGIQAFLHP++SLSQ+SLI+IFLYKRC Sbjct: 137 LFLQRLVNSRGDLTDGTLIITHRTQLEILVAIKTGIQAFLHPSVSLSQASLIDIFLYKRC 196 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIAC ++LPA++C C+IC+ K GFCNLCMCVIC KFDF N+CRWIGCD+CSHW HTDC Sbjct: 197 RNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGCDLCSHWTHTDC 256 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AI G I G S K + E LF C AC+ TSEL G+VKDVFQHCAP+WD EA ++ELD Sbjct: 257 AISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLGWVKDVFQHCAPSWDAEAFVRELD 316 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 +VR+IF+ SEDARG+KLFWK +ELIEKLK+ + DP+ AC IL FFQE D D S S +N Sbjct: 317 YVRRIFQRSEDARGRKLFWKCEELIEKLKNGVADPM-ACKVILSFFQELDVDPSKSQDND 375 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EGG LIAP++A N+IA+VVQ+ RKME VAEEKMRM KKAR LDACD+EL+DKA VT Sbjct: 376 EGGRLIAPEEAFNKIADVVQEAIRKMEAVAEEKMRMVKKARLALDACDQELKDKAREVTS 435 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LKMERQ+KK QI+ELESIVRLKQAEADMF LKA EARREAE Y S Sbjct: 436 LKMERQRKKQQIDELESIVRLKQAEADMFDLKAGEARREAERLQRIALAKTEKSEEDYAS 495 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQCD------FDPMKMRMESEIRGLLKGM 474 +YLK RLSEAE +QYLFE++K QE+S+ DP +M M S+I+ L+K M Sbjct: 496 RYLKQRLSEAEAEKQYLFEKIKLQESSRASQSSAGGNDPSQM-MYSKIQDLIKNM 549 >DUF1423_Q84N38_72-549_PF07227.1 Length = 478 Score = 658 bits (1699), Expect = 0.0 Identities = 306/475 (64%), Positives = 366/475 (77%), Gaps = 10/475 (2%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R++SN+D++SLRDIARERVDV+AERM LPDE+LE+ K LR ILEG GAQ ++EF Sbjct: 6 SVVRNISNSDKMSLRDIARERVDVIAERMRNLPDEYLEKFKHELRVILEGLGGAQHREEF 65 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 +FLQ+ V SR DLT TL+ HR QLEILVAI TGIQAFLHP++SLSQ+SLI+IFLYKRC Sbjct: 66 LFLQRLVNSRGDLTDGTLIITHRTQLEILVAIKTGIQAFLHPSVSLSQASLIDIFLYKRC 125 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIAC ++LPA++C C+IC+ K GFCNLCMCVIC KFDF N+CRWIGCD+CSHW HTDC Sbjct: 126 RNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGCDLCSHWTHTDC 185 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AI G I G S K + E LF C AC+ TSEL G+VKDVFQHCAP+WD EA ++ELD Sbjct: 186 AISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLGWVKDVFQHCAPSWDAEAFVRELD 245 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 +VR+IF+ SEDARG+KLFWK +ELIEKLK+ + DP+ AC IL FFQE D D S S +N Sbjct: 246 YVRRIFQRSEDARGRKLFWKCEELIEKLKNGVADPM-ACKVILSFFQELDVDPSKSQDND 304 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EGG LIAP++A N+IA+VVQ+ RKME VAEEKMRM KKAR LDACD+EL+DKA VT Sbjct: 305 EGGRLIAPEEAFNKIADVVQEAIRKMEAVAEEKMRMVKKARLALDACDQELKDKAREVTS 364 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LKMERQ+KK QI+ELESIVRLKQAEADMF LKA EARREAE Y S Sbjct: 365 LKMERQRKKQQIDELESIVRLKQAEADMFDLKAGEARREAERLQRIALAKTEKSEEDYAS 424 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQCD------FDPMKMRMESEIRGLLKGM 474 +YLK RLSEAE +QYLFE++K QE+S+ DP +M M S+I+ L+K M Sbjct: 425 RYLKQRLSEAEAEKQYLFEKIKLQESSRASQSSAGGNDPSQM-MYSKIQDLIKNM 478 >gi|8778236|gb|AAF79245.1| F10B6.14 [Arabidopsis thaliana] Length = 760 Score = 654 bits (1688), Expect = 0.0 Identities = 231/481 (48%), Positives = 302/481 (62%), Gaps = 14/481 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 285 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 342 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 343 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 402 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 403 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 462 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 463 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 522 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF S Sbjct: 523 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNCKFLIST 582 Query: 301 SLENGEGGF----LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 + F L++ A E + D R++ V AE R K SV + ++ Sbjct: 583 CIRFYRLKFDYILLLSQFLADAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQ 640 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 + K+ A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 641 KKKSFALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKT 694 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+ Sbjct: 695 EKMEEEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEV 754 Query: 477 T 477 T Sbjct: 755 T 755 >gi|20148719|gb|AAM10250.1| unknown protein [Arabidopsis thaliana] Length = 733 Score = 631 bits (1629), Expect = e-180 Identities = 227/477 (47%), Positives = 296/477 (62%), Gaps = 33/477 (6%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 285 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 342 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 343 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 402 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 403 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 462 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 463 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 522 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF +S Sbjct: 523 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNYAES--- 579 Query: 301 SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA 360 + D R++ V AE R K SV + ++ + K+ Sbjct: 580 --------------------IPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQKKKS 617 Query: 361 CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXX 420 A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 618 FALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKTEKME 671 Query: 421 XXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+T Sbjct: 672 EEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEVT 728 >DUF1423_Q9LQV7_285-755_PF07227.1 Length = 471 Score = 627 bits (1617), Expect = e-178 Identities = 231/481 (48%), Positives = 302/481 (62%), Gaps = 14/481 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 1 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 58 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 59 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 118 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 119 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 178 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 179 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 238 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF S Sbjct: 239 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNCKFLIST 298 Query: 301 SLENGEGGF----LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 + F L++ A E + D R++ V AE R K SV + ++ Sbjct: 299 CIRFYRLKFDYILLLSQFLADAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQ 356 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 + K+ A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 357 KKKSFALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKT 410 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+ Sbjct: 411 EKMEEEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEV 470 Query: 477 T 477 T Sbjct: 471 T 471 >gi|28973711|gb|AAO64172.1| unknown protein [Arabidopsis thaliana] Length = 975 Score = 584 bits (1507), Expect = e-165 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 514 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 571 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 572 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 631 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 632 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 691 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 692 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 751 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 752 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 809 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER-QKKKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 810 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 868 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 869 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 928 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 929 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 969 >gi|7573333|emb|CAB87803.1| putative protein [Arabidopsis thaliana] Length = 1162 Score = 575 bits (1483), Expect = e-163 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 701 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 758 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 759 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 818 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 819 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 878 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 879 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 938 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 939 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 996 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER-QKKKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 997 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 1055 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 1056 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 1115 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 1116 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 1156 >DUF1423_Q84TI3_497-969_PF07227.1 Length = 473 Score = 558 bits (1439), Expect = e-157 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 18 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 75 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 76 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 135 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 136 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 195 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 196 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 255 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 256 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 313 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER-QKKKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 314 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 372 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 373 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 432 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 433 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 473 >gi|14583098|gb|AAK69758.1| CDPK adapter protein 1 [Mesembryanthemum crystallinum] Length = 479 Score = 205 bits (523), Expect = 2e-51 Identities = 68/295 (23%), Positives = 121/295 (41%), Gaps = 64/295 (21%) Query: 107 HPNISLSQSSLIE------IFLYKRCR--NIACQNLLPAD------DCDCDICSNKKGFC 152 H ++ +S + E + C+ N C +LL + CD+C ++ FC Sbjct: 141 HGSVRISSEEVAEQSPSGPLTGTAVCKAGNRFCSSLLEEEISPSAAAQSCDVCCSEPSFC 200 Query: 153 NLCMCVIC-SKFDFASNTCRWIGCD-------VCSHWCHTDCAIREGLIKMGHSAKGASG 204 C C++C + D A +I C+ +C H H +CA+R M + G+ G Sbjct: 201 RDCSCILCCNTIDLAYGGYSFIRCEAIVHDDVICGHAAHINCALRS---YMAGTVGGSVG 257 Query: 205 MTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLF 264 + ++C C+ ++L V + + C + + K L+ + RGS+ ++L Sbjct: 258 -LDTEYYCRRCDTRTDLTKHVTKLLKTCESIESRDDIEKMLNVASCLLRGSQKKGSERLL 316 Query: 265 WKADELIEKLK--SKLID--------------PLDACNFILMFFQECDSDSPSLENGEGG 308 + ++KLK S L D LD N++ + D D +L + Sbjct: 317 NHIESALQKLKGGSDLQDVWKLEVDVMSLPTGQLDYTNYV-----QVDIDENNLSH---- 367 Query: 309 FLIAPQDAC----NEIAEVVQDTARKMEV---VAEEKMRMFKKARSVL-DACDRE 355 Q+ C EI +V+ + R EV +A+E++R K S L D+E Sbjct: 368 -----QNECLKLEVEIDQVLHELRRSQEVEYRLAQERLRAQKDHLSSLYQQMDKE 417 >gi|40804910|gb|AAR91717.1| vernalization insensitive 3 [Arabidopsis thaliana] Length = 600 Score = 190 bits (483), Expect = 7e-47 Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 19/159 (11%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTD 185 C N+AC+ L DD FC C C IC KFD + W+ CD C CH + Sbjct: 110 CENLACRAALGCDDT----------FCRRCSCCICQKFDDNKDPSLWLTCDACGSSCHLE 159 Query: 186 CAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKEL 245 C +++ +G S + F+C C ++L G + + + L L Sbjct: 160 CGLKQDRYGIG------SDDLDGRFYCAYCGKDNDLLGCWRKQVKVAKETRRVDVLCYRL 213 Query: 246 DFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 +K+ RG+ R L DE ++KL+ + PL Sbjct: 214 SLGQKLLRGTTKYR--NLLELMDEAVKKLEGDV-GPLSG 249 >gi|9294095|dbj|BAB01947.1| unnamed protein product [Arabidopsis thaliana] Length = 602 Score = 187 bits (475), Expect = 6e-46 Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 29/170 (17%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCD--------V 177 C+N +C+ +P +D FC C C +C FD + W+ C+ Sbjct: 49 CKNASCRANVPKED----------SFCKRCSCCVCHNFDENKDPSLWLVCEPEKSDDVEF 98 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWD 237 C CH +CA RE +K+G A G + F C +C S++ G K Sbjct: 99 CGLSCHIECAFRE--VKVGVIALGNLMKLDGCFCCYSCGKVSQILGCWKKQLVAAKEARR 156 Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID---PLDA 284 + L +D ++ G+ F + E++ KS L D PLD Sbjct: 157 RDGLCYRIDLGYRLLNGTSR------FSELHEIVRAAKSMLEDEVGPLDG 200 >gi|50942423|ref|XP_480739.1| putative coiled-coil protein [Oryza sativa (japonica cultivar-group)] Length = 630 Score = 179 bits (454), Expect = 2e-43 Identities = 41/173 (23%), Positives = 70/173 (40%), Gaps = 22/173 (12%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDV-------- 177 CRN+ACQ L + D +C C C IC K+D + W+ C Sbjct: 129 CRNVACQATLNSGD----------AYCKRCSCCICHKYDENKDPSLWLVCSSDTPYSGYS 178 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWD 237 C CH CA++ K G G + ++ F+C+ C + L ++ + Sbjct: 179 CGTSCHLKCALKNK--KAGIFKNGCNKKSDGSFYCVWCGKMNWLMRNLRKQLAIARESRR 236 Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILM 290 + L + L K+ +GSE R +L + ++ L+ ++ LD + I Sbjct: 237 VDVLCERLSLTHKMVKGSERYR--ELANIINSAVKILEKEVGCALDQVSAITG 287 >gi|51535981|dbj|BAD38062.1| putative coiled-coil protein [Oryza sativa (japonica cultivar-group)] Length = 749 Score = 177 bits (450), Expect = 5e-43 Identities = 38/161 (23%), Positives = 63/161 (39%), Gaps = 22/161 (13%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC--------DV 177 C N+AC+ L +D FC C C IC K+D + W+ C D Sbjct: 143 CHNLACRATLNPED----------KFCRRCSCCICFKYDDNKDPSLWLFCSSDQPLQKDS 192 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWD 237 C CH +CA+++G + G G + ++C C ++L G K Sbjct: 193 CVFSCHLECALKDG--RTGIMQSGQCKKLDGGYYCTRCRKQNDLLGSWKKQLVIAKDARR 250 Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKL 278 + L + KI +E L D ++KL++++ Sbjct: 251 LDVLCHRIFLSHKILVSTEKY--LVLHEIVDTAMKKLEAEV 289 >gi|50918667|ref|XP_469730.1| unknown protein [Oryza sativa (japonica cultivar-group)] Length = 378 Score = 173 bits (439), Expect = 9e-42 Identities = 61/278 (21%), Positives = 103/278 (37%), Gaps = 43/278 (15%) Query: 141 DCDICSNKKGFCNLCMCVICSKF-DFASNTCRWIGCD-------VCSHWCHTDCAIREGL 192 DCD+C FC C CV C + D++ +I C+ +C H H DCA+R Sbjct: 47 DCDLCCKMPDFCRECCCVFCRRVVDYSFGGYSYIKCEAVLEENKICGHIGHLDCALR--- 103 Query: 193 IKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIF 252 M + G +M + C C++ + L V+ + C + + L+ + Sbjct: 104 TFMAGTVGGCID-LDMQYCCRRCDNKTNLMLHVEKFLEICQSLQSRDDIEPILNTGLCLV 162 Query: 253 RGSEDARGKKLFWKADELIEKLK--------------------SKLIDPLDACNFILMFF 292 RGS R K L + KLK S + P +L Sbjct: 163 RGSRQTRAKSLESIMRSAMAKLKCGVDLAEVWKMEDNGINSTPSAEVSPATGGVTVLGIQ 222 Query: 293 QECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDAC 352 Q + D+P GF A N++ V++ + E++ + + +D Sbjct: 223 QAPEEDAP------PGFPYYVDLADNDLQRAVENLP---AYITEDQHTLSVRFEDSIDHA 273 Query: 353 DRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 +EL K + K+ QK Q + + S+ R +E Sbjct: 274 LKEL--KRSQEAEYKLAEQKLYSQKDHVLSLYRQLDSE 309 >gi|33339558|gb|AAQ14302.1| ABRH1 [Marsilea quadrifolia] Length = 148 Score = 173 bits (438), Expect = 1e-41 Identities = 64/143 (44%), Positives = 86/143 (60%) Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 NE+ E ++ + V K+ K+R+VL D LEDK +L+ ER +K+ +I Sbjct: 5 NEVTEGQENLPKAAAAVGGSKLMEMDKSRAVLQNFDCNLEDKRPVAAELQFERARKRAEI 64 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE 437 E++ES+VR+KQAEA MFQ++ADEAR+EA +T KY KLRLSEAEE Sbjct: 65 EDIESVVRIKQAEAKMFQIRADEARKEAGGLQRIIVAKREKIEEDFTCKYKKLRLSEAEE 124 Query: 438 RRQYLFEELKAQENSQCDFDPMK 460 RRQ EEL+A EN+Q DF K Sbjct: 125 RRQKRLEELQALENAQNDFHKKK 147 >gi|51038197|gb|AAT94000.1| unknow protein [Oryza sativa (japonica cultivar-group)] Length = 607 Score = 158 bits (401), Expect = 3e-37 Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 28/169 (16%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC-------DVC 178 C+N+AC+ ++ ++D FC C C IC +FD + W+ C + C Sbjct: 53 CKNLACKAVVTSED----------SFCKRCSCCICHQFDDNKDPSLWLVCASENDDKNCC 102 Query: 179 SHWCHTDCAI---REGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPN 235 CH +CA+ R G +G+ + + + C +C S + G+ K Sbjct: 103 GSSCHIECALQHKRVGCFNLGNIIQ-----LDGSYSCASCGKVSGILGYWKRQLVIAKDA 157 Query: 236 WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 + L + ++ G+ R K+L ++ KL+S++ PLD Sbjct: 158 RRVDMLCHRIYLSYRLLGGT--TRFKELHGIIEDAKAKLESEV-GPLDG 203 >gi|60547711|gb|AAX23819.1| hypothetical protein At2g18880 [Arabidopsis thaliana] Length = 529 Score = 144 bits (363), Expect = 6e-33 Identities = 32/143 (22%), Positives = 51/143 (35%), Gaps = 20/143 (13%) Query: 124 KRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC-------- 175 C+N+ACQN L + FC C C IC K+D + W+ C Sbjct: 117 MYCQNLACQNKL----------REEATFCKRCSCCICFKYDDNKDPSLWLTCNSDSQFDG 166 Query: 176 DVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPN 235 + C CH +CA K G S + F+C++C T+ +K Sbjct: 167 ESCGLSCHLNCAFDSE--KSGLKEDTPSSDIDGCFNCVSCGKTNSKIECLKKQLIIANEE 224 Query: 236 WDFEALIKELDFVRKIFRGSEDA 258 + K+ +G++ Sbjct: 225 RRVGVFCYRILLAHKLLKGTKKY 247 >DUF1423_Q7X9D9_31-147_PF07227.1 Length = 117 Score = 142 bits (358), Expect = 2e-32 Identities = 59/117 (50%), Positives = 76/117 (64%) Query: 344 KARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 K+R+VL D LEDK +L+ ER +K+ +IE++ES+VR+KQAEA MFQ++ADEAR+ Sbjct: 1 KSRAVLQNFDCNLEDKRPVAAELQFERARKRAEIEDIESVVRIKQAEAKMFQIRADEARK 60 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMK 460 EA +T KY KLRLSEAEERRQ EEL+A EN+Q DF K Sbjct: 61 EAGGLQRIIVAKREKIEEDFTCKYKKLRLSEAEERRQKRLEELQALENAQNDFHKKK 117 >gi|7269920|emb|CAB81013.1| putative protein [Arabidopsis thaliana] Length = 714 Score = 130 bits (328), Expect = 8e-29 Identities = 41/168 (24%), Positives = 66/168 (39%), Gaps = 27/168 (16%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC--------DV 177 C+N+AC+ +L +D FC C C IC K+D + W+ C + Sbjct: 146 CKNLACRAVLRQED----------SFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFEGES 195 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEML-FHCIACNHTSELFGFVKDVFQHCAPNW 236 C CH +CA +G + +E F+C++C + L K Sbjct: 196 CGFSCHLECAFNTEKSGLGKDKQ-----SEGCCFYCVSCGKANSLLECWKKQLTIAKETR 250 Query: 237 DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 E L L V+K+ + S R L DE ++ L++ + PL Sbjct: 251 RVEVLCYRLFLVQKLLKSSTKYR--NLCEVVDEAVKTLEADV-GPLTG 295 >gi|8778731|gb|AAF79739.1| T25N20.6 [Arabidopsis thaliana] Length = 481 Score = 113 bits (283), Expect = 1e-23 Identities = 70/296 (23%), Positives = 117/296 (39%), Gaps = 43/296 (14%) Query: 123 YKRCRNI--ACQN-LLPADDCDCDICSNKKGFCNLCMCVICSKFDF-ASNTCRWIGCD-- 176 ++CR++ C+ LPA CDIC ++ FC C C++C K +I C+ Sbjct: 177 NEKCRSLMPQCEAETLPA--MPCDICCGERKFCVDCCCILCCKLISLEHGGYSYIKCEAV 234 Query: 177 -----VCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQH 231 +C H H +CA+R + + G+ G + ++C C+ +LF V + Sbjct: 235 VSEGHICGHVAHMNCALR---AYLAGTIGGSMG-LDTEYYCRRCDAKKDLFPHVNKFLEI 290 Query: 232 CAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEK----LKSKLIDPLDA-CN 286 C + K L+ I RG++ K+L + + K L D +A N Sbjct: 291 CQTVEYQGDVEKILNLGICILRGAQRDNAKELLNCIESTVIKIIFILVVDYSDSGEAREN 350 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV---VAEEKMRMFK 343 L Q+ P N E EI EV++ + E +AE K+ K Sbjct: 351 DTLQSLQDVTPIGPIPFNHEA----EMHKLEEEIGEVLRALRKAQEFEYQIAEGKLHAQK 406 Query: 344 KARSVLDACDRELEDKACAVT---------DLKMERQKKKPQIEELESIVRLKQAE 390 + S L R+LE + ++ L K+ QI + + +LK+ E Sbjct: 407 ECLSDL---YRQLEKEKSELSRRVSGTDANSLMTNVLKRLDQIR--KEVTKLKEME 457 >gi|18859373|ref|NP_571010.1| nuclear oncoprotein skia [Danio rerio] Length = 727 Score = 49.4 bits (117), Expect = 2e-04 Identities = 44/182 (24%), Positives = 69/182 (37%), Gaps = 34/182 (18%) Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQ-ECDSDSPSLENGEGGF 309 + G E L + + L + L + L F+ + + + Sbjct: 522 LLSGGEGHAMNNLESELETLRQALDNGLDSKESKEKFLHEIVKMRVKQEEKLGSALQAKR 581 Query: 310 LIAPQDACNEIA---------EVVQDTARKME---VVAEEKMRMFKKARSVLDACDRELE 357 + + +A E ++ +++E +E KMR ++R L RELE Sbjct: 582 SLQQELEFLRVAKKEKLREATEAKRNLRKEIERLRAESERKMREANESRMRLK---RELE 638 Query: 358 --------DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARRE 404 DK C L R K QIE+L+ V+L+ AEAD QL+AD EAR Sbjct: 639 QARQLRVCDKGCEAGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLIHEREAREH 693 Query: 405 AE 406 E Sbjct: 694 LE 695 >gi|68351395|gb|EAN32158.1| hypothetical protein, conserved [Theileria parva] Length = 3588 Score = 48.3 bits (114), Expect = 5e-04 Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 16/92 (17%) Query: 151 FCNLC--------MCVICSKFDFASNTCR--WIGCDVCSHWCHTDCAIREGLIKMGHSAK 200 FC C C IC K +T W+ C+ C W H +C LI S++ Sbjct: 1233 FCLKCWELLERSNYCGICYKVWTNFDTSSQKWVQCEGCKLWIHIECDDLARLITDCPSSR 1292 Query: 201 GASGMTEMLFHCIACNHTSELFGFVKDVFQHC 232 + + C+ C ++F K + Q Sbjct: 1293 NQN------YRCLICRSEDKMFRCTKALEQIF 1318 >gi|50759355|ref|XP_425739.1| PREDICTED: similar to C-ski protein FB28 - chicken [Gallus gallus] Length = 2940 Score = 47.5 bits (112), Expect = 8e-04 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 28/174 (16%) Query: 256 EDARGKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGE 306 D+ L + + L + L S L F + M ++ + + +L+ + E Sbjct: 2743 SDSHSSGLEAELEHLRQALDSGLDTKEAKEKFLHEVVKMRVKQEEKLNAALQAKRSLHQE 2802 Query: 307 GGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE-------- 357 FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 2803 LEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVC 2862 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 2863 DKGCEAGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 2911 >gi|73956613|ref|XP_546730.2| PREDICTED: similar to Ski oncogene (C-ski) [Canis familiaris] Length = 790 Score = 46.3 bits (109), Expect = 0.002 Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 30/171 (17%) Query: 257 DARGKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGEG 307 D L + + L + L+ L F + M ++ + S +L+ + E Sbjct: 594 DTTSGGLEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLSAALQAKRSLHQEL 653 Query: 308 GFL-IAPQDACNEIAEVVQDTARKME---VVAEEKMRMFKKARSVLDACDRELE------ 357 FL +A ++ E E ++ +++E E+KMR ++R L RELE Sbjct: 654 EFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMREANESRLRLK---RELEQARQVR 710 Query: 358 --DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR-REA 405 DK C L R K QIE+L+ V+L+ AEAD QL+AD R REA Sbjct: 711 VCDKGCEAGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLLREREA 756 >gi|158818|gb|AAA29025.1| zinc-binding protein Length = 3759 Score = 45.9 bits (108), Expect = 0.002 Identities = 29/148 (19%), Positives = 45/148 (30%), Gaps = 28/148 (18%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLCM--------CVICSK-FDFASNTCRWIG 174 R + C N L C S G C C C IC + +D + + Sbjct: 1383 RPLICVNCLKCKSCSTTKVSKFVGNLPMCTGCFKLRKKGNFCPICQRCYDDNDFDLKMME 1442 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 C C W H+ C + + + + + F C C +E + A Sbjct: 1443 CGDCGQWVHSKCEGLSDEQYNLLSTL-----PESIEFICKKCARRNE-------SSKIKA 1490 Query: 234 PNWDFEALIK---ELDFVRKIFRGSEDA 258 W + + L V K+ S A Sbjct: 1491 EEWRQAVMEEFKASLYSVLKLLSKSRQA 1518 >gi|1052593|emb|CAA90513.1| trithorax protein trxII [Drosophila melanogaster] Length = 3726 Score = 45.9 bits (108), Expect = 0.002 Identities = 29/148 (19%), Positives = 45/148 (30%), Gaps = 28/148 (18%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLCM--------CVICSK-FDFASNTCRWIG 174 R + C N L C S G C C C IC + +D + + Sbjct: 1383 RPLICVNCLKCKSCSTTKVSKFVGNLPMCTGCFKLRKKGNFCPICQRCYDDNDFDLKMME 1442 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 C C W H+ C + + + + + F C C +E + A Sbjct: 1443 CGDCGQWVHSKCEGLSDEQYNLLSTL-----PESIEFICKKCARRNE-------SSKIKA 1490 Query: 234 PNWDFEALIK---ELDFVRKIFRGSEDA 258 W + + L V K+ S A Sbjct: 1491 EEWRQAVMEEFKASLYSVLKLLSKSRQA 1518 >gi|23494457|dbj|BAC19423.1| putative endopeptidase Clp ATP-binding chain B [Corynebacterium efficiens YS-314] Length = 852 Score = 45.9 bits (108), Expect = 0.002 Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 39/162 (24%) Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 FQ+ PS+E+ G ++ E+ V+ + AE R Sbjct: 335 FQQVYVGEPSVEDTVG--ILRGLKERYEVHHGVRIQDSALVAAAELSHRYI--------- 383 Query: 352 CDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE 406 R L DKA A + L+ME +I+ELE IVR + E + D A RE Sbjct: 384 TSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEIEEVALTKETDVASRE-- 441 Query: 407 XXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 + +LR A+ER ELKA Sbjct: 442 -------------------RLERLRSELADERE--KLSELKA 462 >gi|4506967|ref|NP_003027.1| v-ski sarcoma viral oncogene homolog [Homo sapiens] Length = 728 Score = 45.6 bits (107), Expect = 0.003 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 28/176 (15%) Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 L EL+ +R+ G D + K E++ K++ K + L A + Sbjct: 537 GLEAELEHLRQALEGGLDTKEAK-EKFLHEVV-KMRVKQEEKLSAA-----------LQA 583 Query: 300 PSLENGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE- 357 + E FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 584 KRSLHQELEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRLRLKRELEQ 643 Query: 358 -------DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR-REA 405 DK C L R K QIE+L+ V+L+ AEAD QL+AD R REA Sbjct: 644 ARQARVCDKGCEAGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLLREREA 694 >gi|41326957|emb|CAF20801.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Corynebacterium glutamicum ATCC 13032] Length = 852 Score = 45.2 bits (106), Expect = 0.004 Identities = 47/192 (24%), Positives = 71/192 (36%), Gaps = 48/192 (25%) Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 FQ+ P++E+ G ++ E+ V+ + AE R Sbjct: 335 FQQVYVGEPTVEDAIG--ILRGLKERYEVHHGVRIQDSALVAAAELSNRYI--------- 383 Query: 352 CDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE 406 R L DKA A + L+ME +I+ELE IVR + E ++D A +E Sbjct: 384 TSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEIEEMALSKESDAASKE-- 441 Query: 407 XXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA----QENSQCDFDPMK-- 460 + KLR A+ER ELKA ++ + D MK Sbjct: 442 -------------------RLEKLRSELADERE--KLSELKARWQNEKTAIDDVREMKEE 480 Query: 461 ---MRMESEIRG 469 +R ES+I Sbjct: 481 LEALRSESDIAE 492 >gi|6048269|emb|CAB58126.1| c-ski protein [Oreochromis aureus] Length = 714 Score = 44.0 bits (103), Expect = 0.008 Identities = 39/167 (23%), Positives = 63/167 (37%), Gaps = 28/167 (16%) Query: 263 LFWKADELIEKLKSKLIDPLDACNFILMFFQ-ECDSDSPSLENGEGGFLIAPQDACNEIA 321 L + + L + L S L F+ + + + + + +A Sbjct: 541 LESELESLRQALDSGLDSKESKEKFLHEIVKMRVKQEEKLGSALQAKRSLQQELEFLRVA 600 Query: 322 ---------EVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACAVT 364 E ++ +++E + E + K+A RELE DK C Sbjct: 601 KKEKLREATEAKRNLRKEIERLRAESEKKMKEANESRIRLKRELEQARQLRVCDKGCEAG 660 Query: 365 DLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L+ ++L+ AEAD QL+AD EAR E Sbjct: 661 RL---RAKYSAQIEDLQ--MKLQHAEADREQLRADLLHEREAREHLE 702 >gi|34904048|ref|NP_913371.1| P0489G09.12 [Oryza sativa (japonica cultivar-group)] Length = 606 Score = 44.0 bits (103), Expect = 0.009 Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 10/73 (13%) Query: 131 CQNLLPADDCDCDICSNKKGFCNLCM--------CVICSKFDFASNTCRWIGCDVCSHWC 182 C N LP + ++ C C C IC K ++ W+ CD C W Sbjct: 514 CGNRLPCKIASKKKQAGERLLCRHCDKLLQSKQYCGICKKIWHHTDGGNWVCCDECQIWV 573 Query: 183 HTDCAIREGLIKM 195 H +C + IKM Sbjct: 574 HVEC--DQTCIKM 584 >gi|65304433|emb|CAI76812.1| hypothetical protein, conserved [Theileria annulata] Length = 3595 Score = 44.0 bits (103), Expect = 0.009 Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 16/92 (17%) Query: 151 FCNLC--------MCVICSKFDFASNTCR--WIGCDVCSHWCHTDCAIREGLIKMGHSAK 200 FC C C IC K + W+ C+ C W H +C LI S++ Sbjct: 1198 FCLKCWELLERSNYCGICYKVWTHFDGSSQKWVQCEGCKLWIHIECDDLARLITDCPSSR 1257 Query: 201 GASGMTEMLFHCIACNHTSELFGFVKDVFQHC 232 + + C C ++F K + Q Sbjct: 1258 NQN------YRCCICRSEDKMFRCTKALEQIF 1283 >gi|21322226|ref|NP_035515.1| Sloan-Kettering viral oncogene homolog [Mus musculus] Length = 725 Score = 44.0 bits (103), Expect = 0.009 Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 28/176 (15%) Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 L EL+ +R+ G D + K E++ K++ K + L A + Sbjct: 534 GLEAELEHLRQALEGGLDTKEAK-EKFLHEVV-KMRVKQEEKLTAA-----------LQA 580 Query: 300 PSLENGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE- 357 + E FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 581 KRTLHQELEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRVRLKRELEQ 640 Query: 358 -------DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR-REA 405 DK C L R K Q+E+L++ +L+ AEAD QL+AD R REA Sbjct: 641 ARQVRVCDKGCEAGRL---RAKYSAQVEDLQA--KLQHAEADREQLRADLLREREA 691 >gi|29029074|gb|AAO64916.1| At5g53430 [Arabidopsis thaliana] Length = 1043 Score = 44.0 bits (103), Expect = 0.010 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 10/87 (11%) Query: 132 QNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREG 191 + L+P D C CS +C IC + ++ W+ CD C W H+ C Sbjct: 393 KALIPGDQLLCQPCSKLTK--PKHVCGICKRIWNHLDSQSWVRCDGCKVWIHSAC----D 446 Query: 192 LIKMGHSAKGASGMTEMLFHCIACNHT 218 I H + E ++C C Sbjct: 447 QISHKHFK----DLGETDYYCPTCRTK 469 >gi|68357652|ref|XP_693359.1| PREDICTED: similar to fetal Alzheimer antigen isoform 2 [Danio rerio] Length = 2250 Score = 43.6 bits (102), Expect = 0.010 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 16/77 (20%) Query: 158 VICSK-FDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACN 216 IC +D + +IGCD+CS+W H +C +G + K A M + + C C Sbjct: 2025 CICKTPYDESK---FYIGCDLCSNWYHGEC--------VGITEKEAKKMDD--YICSECK 2071 Query: 217 HTSELFGFVKDVFQHCA 233 E G ++++ C Sbjct: 2072 RAQE--GNTEELYCICR 2086 >gi|73979825|ref|XP_858425.1| PREDICTED: similar to intersectin 2 isoform 3 isoform 8 [Canis familiaris] Length = 1599 Score = 43.3 bits (101), Expect = 0.015 Identities = 40/224 (17%), Positives = 84/224 (37%), Gaps = 44/224 (19%) Query: 250 KIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGG- 308 ++ + ++ + L + D I ++K + D N ++ E + ++N + G Sbjct: 513 RLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQDYQNKLIYLVPEKQLLNERIKNMQLGN 572 Query: 309 -------FLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKAC 361 L E+ + +++ +E K+ D+ + +L+ Sbjct: 573 TPDLGIGLLHKKSLEKEELCQRLKEQLDALEKETASKLSEM-------DSFNNQLK---- 621 Query: 362 AVTDLKMERQKKKPQIEELESIVR--LKQAE---ADMFQLKA--DEARREAEXXXXXXXX 414 +L+ ++ +E+L I R LK+ E +++ Q K DEA R+A+ Sbjct: 622 ---ELRESYNTQQLALEQLHKIKRDKLKEIERKRSELIQKKKLEDEAIRKAKQGK----- 673 Query: 415 XXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDP 458 + L + EE +Q +E KAQE Q + Sbjct: 674 ----------ENLWRESLRKEEEEKQKRLQEEKAQEKVQEEERK 707 >gi|60491828|emb|CAH06586.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] Length = 541 Score = 43.3 bits (101), Expect = 0.015 Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 29/149 (19%) Query: 280 DPLDACNFILMFFQECDSDS-----PSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 D DA N+I+ +E +S + ++E E I + E V +T + ++ Sbjct: 180 DIRDAANYIVNLGKEAESKAQNEAQANIEEQEKLGAIKIANQIKERETKVAETRKDQDIA 239 Query: 335 -AEEKMRMFKKARSVLDACDREL--------EDKACAVTDLKMER--------QKKKPQI 377 AE K K + D++ +K V + E+ +K+ +I Sbjct: 240 IAETK----KLQEISVANADKDRISQVAIANAEKESQVAKAEAEKNIRIEQANTEKESRI 295 Query: 378 EELESIVRLKQAEADMFQLKADEARREAE 406 EL S + +KQAEA Q KA R EA+ Sbjct: 296 AELNSDMEIKQAEA---QKKAAIGRNEAQ 321 >gi|46329445|gb|AAH68305.1| Ski protein [Mus musculus] Length = 675 Score = 43.3 bits (101), Expect = 0.015 Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 28/176 (15%) Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 L EL+ +R+ G D + K E++ K++ K + L A + Sbjct: 484 GLEAELEHLRQALEGGLDTKEAK-EKFLHEVV-KMRVKQEEKLTAA-----------LQA 530 Query: 300 PSLENGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE- 357 + E FL +A ++ E E + +++E + E + K+A RELE Sbjct: 531 KRSLHQELEFLRVAKKEKLREATEAKRSLRKEIERLRAENEKKMKEANESRVRLKRELEQ 590 Query: 358 -------DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR-REA 405 DK C L R K QIE+L++ +L+ AEAD QL+AD R REA Sbjct: 591 ARQVRVCDKGCEAGRL---RAKYSAQIEDLQA--KLQHAEADREQLRADLLREREA 641 >gi|1351069|sp|P49140|SKI_CHICK Ski oncogene (C-ski) Length = 750 Score = 43.3 bits (101), Expect = 0.016 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 28/174 (16%) Query: 256 EDARGKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGE 306 D+ L + + L + L S L F + M ++ + + +L+ + E Sbjct: 553 SDSHSSGLEAELEHLRQALDSGLDTKEAKEKFLHEVVKMRVKQEEKLNAALQAKRSLHQE 612 Query: 307 GGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE-------- 357 FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 613 LEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVC 672 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 673 DKGCEAGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 721 >gi|73979827|ref|XP_532890.2| PREDICTED: similar to intersectin 2 isoform 3 isoform 1 [Canis familiaris] Length = 1668 Score = 42.9 bits (100), Expect = 0.018 Identities = 45/239 (18%), Positives = 90/239 (37%), Gaps = 53/239 (22%) Query: 250 KIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGG- 308 ++ + ++ + L + D I ++K + D N ++ E + ++N + G Sbjct: 513 RLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQDYQNKLIYLVPEKQLLNERIKNMQLGN 572 Query: 309 -------FLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKAC 361 L E+ + +++ +E K+ D+ + +L+ Sbjct: 573 TPDLGIGLLHKKSLEKEELCQRLKEQLDALEKETASKLSEM-------DSFNNQLK---- 621 Query: 362 AVTDLKMERQKKKPQIEELESIVR--LKQAE---ADMFQLKA--DEARREAEXXXXXXXX 414 +L+ ++ +E+L I R LK+ E +++ Q K DEA R+A+ Sbjct: 622 ---ELRESYNTQQLALEQLHKIKRDKLKEIERKRSELIQKKKLEDEAIRKAKQGK----- 673 Query: 415 XXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD---------FDPMKMRME 464 + L + EE +Q +E KAQE Q + D KMR+E Sbjct: 674 ----------ENLWRESLRKEEEEKQKRLQEEKAQEKVQEEERKVEEKQCKDKDKMRVE 722 >gi|104548|pir||B32575 C-ski protein FB28 - chicken Length = 713 Score = 42.9 bits (100), Expect = 0.018 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 28/174 (16%) Query: 256 EDARGKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGE 306 D+ L + + L + L S L F + M ++ + + +L+ + E Sbjct: 516 SDSHSSGLEAELEHLRQALDSGLDTKEAKEKFLHEVVKMRVKQEEKLNAALQAKRSLHQE 575 Query: 307 GGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE-------- 357 FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 576 LEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVC 635 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 636 DKGCEAGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 684 >gi|67517511|ref|XP_658590.1| hypothetical protein AN0986.2 [Aspergillus nidulans FGSC A4] Length = 748 Score = 42.5 bits (99), Expect = 0.025 Identities = 15/61 (24%), Positives = 20/61 (32%), Gaps = 14/61 (22%) Query: 158 VICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNH 217 IC+ D I C+ CSHW HT C ++ C+ C Sbjct: 672 CICNSMDN--GGHLMIQCESCSHWLHTKC------------VGLERSNLPSVYVCVFCAQ 717 Query: 218 T 218 T Sbjct: 718 T 718 >gi|6048267|emb|CAB58125.1| c-ski protein [Oreochromis aureus] Length = 687 Score = 42.5 bits (99), Expect = 0.025 Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 22/180 (12%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARG--KKLFWKADELIEKLKSKLIDPLDACNFILM 290 P+W + E+ +R++ D + +KL + + K + KL L A Sbjct: 478 RPSWLPGTVCPEMGTMRQMLYAGLDTKEAREKLLQEIVRMRVKQEEKLAAALQAKR---S 534 Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 QE + + + + A ++ EI + D RKM AEE K+ Sbjct: 535 LQQELEFVRVAKKGRLREAIEAKRNLRKEIERLRVDWERKMRE-AEESCGRLKREL---- 589 Query: 351 ACDRELE----DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-EARREA 405 +RE + DK C L R K QIEEL V+L+QAEAD QL+ + + REA Sbjct: 590 --ERERQLRVCDKGCEAERL---RVKYSTQIEELH--VQLQQAEADREQLRRELQQEREA 642 >gi|66359990|ref|XP_627173.1| multidomain chromatinic protein [Cryptosporidium parvum] Length = 2244 Score = 42.1 bits (98), Expect = 0.033 Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 12/101 (11%) Query: 141 DCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIR-EGLIKMGHSA 199 C C KGF C IC K +S W+ CD+C W H DC I+ + Sbjct: 598 SCIRCC--KGFERGQFCSICRKIWTSSWEGEWLQCDICKFWVHYDCDKDLNEPIEFYSNV 655 Query: 200 KGASGMTEMLFHCIACNHTSELFGFVK--DVFQHCAPNWDF 238 K L++C AC + + D F N DF Sbjct: 656 KN-------LYNCPACRSNDNSVKYQRILDHFICLDKNKDF 689 >gi|62650161|ref|XP_233731.3| PREDICTED: similar to Ski protein [Rattus norvegicus] Length = 465 Score = 42.1 bits (98), Expect = 0.036 Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 28/176 (15%) Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 L EL+ +R+ G D + K E++ K++ K + L A + Sbjct: 274 GLEAELEHLRQALEGGLDTKEAK-EKFLHEVV-KMRVKQEEKLTAA-----------LQA 320 Query: 300 PSLENGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE- 357 + E FL +A ++ E E + +++E + E + K+A RELE Sbjct: 321 KRSLHQELEFLRVAKKEKLREATEAKRSLRKEIERLRAENEKKMKEANESRVRLKRELEQ 380 Query: 358 -------DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR-REA 405 DK C L R K QIE+L++ +L+ AEAD QL+AD R REA Sbjct: 381 ARQVRVCDKGCEAGRL---RAKYSAQIEDLQA--KLQHAEADREQLRADLLREREA 431 >gi|13814451|gb|AAK41495.1| Microtubule binding protein, putative [Sulfolobus solfataricus P2] Length = 464 Score = 41.7 bits (97), Expect = 0.041 Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 16/217 (7%) Query: 266 KADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 K +E +KL+ + + ++A + + + LE LI Q +E ++ Sbjct: 119 KLEESTKKLEQAVQELIEAQKKHDERITKLEESTKKLEQA-VQELIEAQKKHDERITKLE 177 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELE-SIV 384 ++ +K+E +E + KK + + + AV +L ++K +I +LE S Sbjct: 178 ESTKKLEQAVQELIEAQKKHDERITKLEESTKKLEQAVQELIEAQKKHDERITKLEESTK 237 Query: 385 RLKQAEADMF--QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEE 437 +L+QA ++ Q K DE + E + KL +L EA++ Sbjct: 238 KLEQAVQELIEAQKKHDERITKLEESIQKLVDAQRRAE----ERIAKLENAVEQLVEAQK 293 Query: 438 RRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 R E + E ++ M++EIR L K + Sbjct: 294 RTD---ERITKLEEVTMKLVESQLGMQNEIRELRKAL 327 Score = 40.6 bits (94), Expect = 0.097 Identities = 43/208 (20%), Positives = 86/208 (41%), Gaps = 6/208 (2%) Query: 267 ADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 A+E I KL++ + ++A + + + LE LI Q +E +++ Sbjct: 64 AEERIAKLENAVEQLVEAQKRTDERITKLEESTKKLEQA-VQELIEAQKKHDERITKLEE 122 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEEL-ESIVR 385 + +K+E +E + KK + + + AV +L ++K +I +L ES + Sbjct: 123 STKKLEQAVQELIEAQKKHDERITKLEESTKKLEQAVQELIEAQKKHDERITKLEESTKK 182 Query: 386 LKQAEADMF--QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLF 443 L+QA ++ Q K DE R + K R+++ EE + L Sbjct: 183 LEQAVQELIEAQKKHDE--RITKLEESTKKLEQAVQELIEAQKKHDERITKLEESTKKLE 240 Query: 444 EELKAQENSQCDFDPMKMRMESEIRGLL 471 + ++ +Q D ++E I+ L+ Sbjct: 241 QAVQELIEAQKKHDERITKLEESIQKLV 268 >gi|104547|pir||C32575 C-ski protein FB27 - chicken Length = 649 Score = 41.3 bits (96), Expect = 0.054 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 18/109 (16%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 517 VAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVCDKGCE 576 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 577 AGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 620 >gi|47229652|emb|CAG06848.1| unnamed protein product [Tetraodon nigroviridis] Length = 600 Score = 41.3 bits (96), Expect = 0.058 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 6/123 (4%) Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE--XXXXXXXXX 415 DK+ + ++ + + Q LE ++K+ EA + QLK D+ R +AE Sbjct: 62 DKSRHAKEA-LDLARMQEQTSHLEYQSKIKEYEAAVEQLKGDQIRIQAEERRKTLNEETK 120 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQYLFEE-LKAQENSQCDFDPM-KMRMESEIRGLLKG 473 Y K + R + ++Q L EE L+ QE S + M K +E E+ L Sbjct: 121 QNQARAQYQDKLARQRYEDQLRQQQALNEENLRKQEESVQKQEAMRKATIEHEM-ELRHK 179 Query: 474 MEM 476 E+ Sbjct: 180 NEL 182 >gi|47228511|emb|CAG05331.1| unnamed protein product [Tetraodon nigroviridis] Length = 3691 Score = 41.3 bits (96), Expect = 0.059 Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 9/95 (9%) Query: 154 LCM-CVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHC 212 C+ C +C AS+ R + CD C HT C L H+ + + C Sbjct: 195 RCLECTVCEACGEASDPGRLLLCDDCDISYHTYC-----LDPPLHTVPKGAWKCKWCVRC 249 Query: 213 IACNHTSELFGF-VKDVFQHCAP--NWDFEALIKE 244 + C +S +D + C P + L + Sbjct: 250 VQCGSSSPGVRCDWQDNYSCCGPCGSLRRCPLCQR 284 >gi|73974720|ref|XP_857253.1| PREDICTED: similar to plectin 1 isoform 1 isoform 6 [Canis familiaris] Length = 4691 Score = 41.3 bits (96), Expect = 0.060 Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 11/160 (6%) Query: 316 ACNEIAEVVQDTAR---KMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQK 372 A ++ E+ + A+ +MEV+ K R +++RS + + LE +A +L E + Sbjct: 1890 ATHKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEASRFRELAEEAAR 1949 Query: 373 KKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLK--- 429 + EE + +L AE D + +A+ R AE K + Sbjct: 1950 LRALAEETKRQRQL--AEEDAARQRAEAERVLAEKLAAISEATRLKTEAEIALKEKEAEN 2007 Query: 430 ---LRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESE 466 RL+E E ++ EE AQ + + ++R SE Sbjct: 2008 ERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKASE 2047 >gi|34904046|ref|NP_913370.1| P0489G09.11 [Oryza sativa (japonica cultivar-group)] Length = 970 Score = 40.9 bits (95), Expect = 0.080 Identities = 36/158 (22%), Positives = 52/158 (32%), Gaps = 27/158 (17%) Query: 130 ACQNLLPADDCDCDICSNKKGFCNLCM--------CVICSKFDFASNTCRWIGCDVCSHW 181 +C N +P + ++ C C C IC K ++ W+ CD C W Sbjct: 452 SCGNRVPPKIAKKKKQAGEQLLCRHCDKLLQSKQYCGICKKIWHHTDGGNWVCCDECQIW 511 Query: 182 CHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEAL 241 H +C + I M + + C C V V Q PN E L Sbjct: 512 VHVECDL--TCINM-------EDLENADYFCPDCKSKR---KTVPPVEQMNTPN-SSEIL 558 Query: 242 IKELDFVRKIFRGSE---DARGKKLFWKADELIEKLKS 276 + ++ SE +K WK KLKS Sbjct: 559 CQCNSCKERLMSLSEWERHTGSRKKNWKMS---VKLKS 593 >gi|71987479|ref|NP_001022117.1| F26H11.2c [Caenorhabditis elegans] Length = 2266 Score = 40.6 bits (94), Expect = 0.085 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 16/98 (16%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNL--CMCVICSK-FDFASNTCRWIGCDVCSHWC 182 C +A Q +L + C+ C ++ + +C K +D ++GCD C W Sbjct: 2000 CVGVAEQTILGLEHWSCEECIEEQERVKDQPALYCVCQKPYDDTK---FYVGCDSCQGWF 2056 Query: 183 HTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSE 220 H +C +G + A + ++C AC +E Sbjct: 2057 HPEC--------VGTTRAEAEQAAD--YNCPACTREAE 2084 >gi|50312549|ref|XP_456310.1| unnamed protein product [Kluyveromyces lactis] Length = 478 Score = 40.6 bits (94), Expect = 0.087 Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%) Query: 157 CVICSKFDFA-SNTCRWIGCDVCSHWCHTDC 186 C C K D W+GC+ C WCH C Sbjct: 8 CHFCKKDDSEDKGQPIWVGCEFCDGWCHLTC 38 >gi|47217567|emb|CAG02494.1| unnamed protein product [Tetraodon nigroviridis] Length = 2093 Score = 40.6 bits (94), Expect = 0.090 Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 21/162 (12%) Query: 316 ACNEIAEVVQDTARKMEVVAE---EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQK 372 ACN E + +K + E EK R K LE +A +L+ ++ Sbjct: 1396 ACNSPKETQMELQQKKAKMKELDREKQRQLK------------LEKEAFVEFELQRKKVT 1443 Query: 373 KKPQIEELESIVRL-----KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY 427 +K + EE + +R KQ + + +++ R+E E + + Sbjct: 1444 EKQEFEEKQRALRRQKQLEKQLDMERQEMEKQRLRQEREKKRLEEMERIREMEKRHLLEL 1503 Query: 428 LKLRLSE-AEERRQYLFEELKAQENSQCDFDPMKMRMESEIR 468 K + +E AE+ RQ L EE++ Q + + + S +R Sbjct: 1504 EKQKQAERAEQERQRLREEVQKVRQRQQELEDRQQPKASALR 1545 >gi|71748844|ref|XP_823477.1| hypothetical protein Tb10.389.0860 [Trypanosoma brucei] Length = 902 Score = 40.6 bits (94), Expect = 0.095 Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 8/167 (4%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 VK+ + W+ ++ + KI + +ED KKL + L E+L + Sbjct: 429 VKESTRRADELWELLSVERRQS-GEKIAQMTED--CKKLRRDCENLSERLAKEQEKARKE 485 Query: 285 CNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM-EVVAEEKMRMFK 343 C + + + + +L+ ++ ++ + Q+ AR M E +A+ K R+ Sbjct: 486 CQRLKDELHKAEESAKTLQRELNNRDLSFENYKQQSEGQQQEMARSMKEDLAKTKKRLEH 545 Query: 344 KARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + LD R L+ + AV +L+ ER K++ + +E+ V +AE Sbjct: 546 E----LDVTQRRLQKQLDAVGELERERDKERSERRAVEATVAKLEAE 588 >gi|55631422|ref|XP_520008.1| PREDICTED: plectin 1 [Pan troglodytes] Length = 5175 Score = 40.6 bits (94), Expect = 0.097 Identities = 46/237 (19%), Positives = 84/237 (35%), Gaps = 24/237 (10%) Query: 236 WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQEC 295 E +EL+ R++ G+ R E + + L Sbjct: 2591 RQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQL------------L 2638 Query: 296 DSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRE 355 + + L+ Q+ E+A+V +MEV+ K R +++RS + + Sbjct: 2639 EEELARLQREAAAATQKRQELEAELAKV----RAEMEVLLASKARAEEESRSTSEKSKQR 2694 Query: 356 LEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXX 415 LE +A +L E + + EE + +L AE D + +A+ R AE Sbjct: 2695 LEAEAGRFRELAEEAARLRALAEEAKRQRQL--AEEDAARQRAEAERVLAEKLAAISEAT 2752 Query: 416 XXXXXXXYTSKYLK------LRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESE 466 K + RL+E E ++ EE AQ + + ++R S+ Sbjct: 2753 RLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKASD 2809 >gi|74002007|ref|XP_535623.2| PREDICTED: similar to Fraser syndrome 1 isoform 1 [Canis familiaris] Length = 3994 Score = 40.6 bits (94), Expect = 0.099 Identities = 43/198 (21%), Positives = 67/198 (33%), Gaps = 49/198 (24%) Query: 124 KRCRNIACQNLLPADDCDCDICS---NKKGFCNLC--MCVICSKFDFASNTCRWIGCD-- 176 RC+N + LL D C D S ++G C C C C ++ CD Sbjct: 811 LRCQNA--RYLLLGDHCVPDCPSGYYAERGACQKCHPSCRTCQ----STGPFSCTSCDAN 864 Query: 177 -VCSH--WCHTDCAIREGLIKMGHSAKGA---------SGMTEMLFHCIACNHTSELFGF 224 V SH C T C GH + + C +C +++ F Sbjct: 865 FVLSHLGTCTTAC-------FPGHYLDDSHTCQPCDADCRSCDSQASCTSCRDPNKVLLF 917 Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 + ++ CAP LDF KI K+ W + L++ + +D Sbjct: 918 GECQYESCAPQ-------YFLDFSTKI--------CKECDWSCNACSGPLRTDCLQCMDG 962 Query: 285 CNFILMFFQECDSDSPSL 302 ++L + SPS Sbjct: 963 --YVLQDGACVEQCSPSF 978 >gi|71987483|ref|NP_001022118.1| F26H11.2d [Caenorhabditis elegans] Length = 692 Score = 40.2 bits (93), Expect = 0.13 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 16/98 (16%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNL--CMCVICSK-FDFASNTCRWIGCDVCSHWC 182 C +A Q +L + C+ C ++ + +C K +D ++GCD C W Sbjct: 426 CVGVAEQTILGLEHWSCEECIEEQERVKDQPALYCVCQKPYDDTK---FYVGCDSCQGWF 482 Query: 183 HTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSE 220 H +C +G + A + ++C AC +E Sbjct: 483 HPEC--------VGTTRAEAEQAAD--YNCPACTREAE 510 >gi|42565848|ref|NP_190778.2| PHD finger family protein [Arabidopsis thaliana] Length = 696 Score = 40.2 bits (93), Expect = 0.14 Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 15/119 (12%) Query: 130 ACQNLLPADDCDCD-----ICSNKKG--FCNLCMCVICSKFDFASNTCRWIGCDVCSHWC 182 +C++ +P + C + G F C +C K S + CD C W Sbjct: 265 SCESTVPGNGQSLRWFLGHTCCDACGRLFVKGNYCPVCLKVYRDSEATPMVCCDFCQRWV 324 Query: 183 HTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEAL 241 H C M G + C C S VKD+ W + + Sbjct: 325 HCQCDGISDEKYMQFQVDGNL-----QYKCSTCRGESY---QVKDLEDAVQEIWKRKDM 375 >gi|47223942|emb|CAG06119.1| unnamed protein product [Tetraodon nigroviridis] Length = 2724 Score = 39.8 bits (92), Expect = 0.15 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 14/61 (22%) Query: 158 VICSK-FDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACN 216 IC +D +IGCD+C++W H +C +G + K A M + + C+ C Sbjct: 2501 CICKTPYDETK---FYIGCDLCTNWYHGEC--------VGITEKKAKKMDD--YICVECK 2547 Query: 217 H 217 Sbjct: 2548 R 2548 >gi|73964054|ref|XP_547990.2| PREDICTED: similar to CDC42-binding protein kinase beta isoform 1 [Canis familiaris] Length = 1676 Score = 39.8 bits (92), Expect = 0.16 Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 38/257 (14%) Query: 229 FQHCAPNWDFEALIKE-LDFVRKI---------FRGSEDARGKKLFWK----ADELIEKL 274 Q A L +E L+ RK+ GS A G K +E IE+L Sbjct: 438 LQVEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSTRALGSSARDKEIKKLNEEIERL 497 Query: 275 KSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 K+K+ D N + Q D+ + E+ + + + + ++ K V Sbjct: 498 KNKIAD----SNRLER--QLEDTVTLRQEHEDSTHRLKGLEKQYRVVRQEKEVFHKQLVE 551 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A E+++ + L ++ + ++L + + Q +++ +R K+ E ++ Sbjct: 552 ASERLKSQARE---LKDAHQQRKLALQEFSELNERMAELRSQKQKVSRQLRDKEEEVEVA 608 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEELKAQENS 452 K D R+E K L+ RL +A E R+ E + Sbjct: 609 MQKIDSMRQEIRKSEKF-------------RKELEARLEDAVAEASRERKLREHSENFSK 655 Query: 453 QCDFDPMKMRMESEIRG 469 Q + + ++M+ RG Sbjct: 656 QVESELEALKMKQGGRG 672 >gi|6648214|gb|AAF21212.1| unknown protein [Arabidopsis thaliana] Length = 764 Score = 39.8 bits (92), Expect = 0.16 Identities = 28/129 (21%), Positives = 43/129 (33%), Gaps = 18/129 (13%) Query: 125 RCRNIACQNLLPADDCDCD-----ICSNKKG--FCNLCMCVICSKFDFASNTCRWIGCDV 177 RC +C + +P + C + G F C +C K S + + CD+ Sbjct: 249 RCH--SCDSTVPGNGLSVRWFLSYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDI 306 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNW- 236 C W H C M G ++ + C C VKD+ W Sbjct: 307 CQRWVHCHCDGISDDKYMQFQVDG-----KLQYKCATCRGECY---QVKDLQDAVQELWK 358 Query: 237 DFEALIKEL 245 + + KEL Sbjct: 359 KKDVVDKEL 367 >gi|41409951|ref|NP_962787.1| ClpB [Mycobacterium avium subsp. paratuberculosis K-10] Length = 848 Score = 39.8 bits (92), Expect = 0.17 Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 28/166 (16%) Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 FQ+ PS+E+ G ++ E+ V+ T + A R L Sbjct: 334 FQQVFVGEPSVEDTVG--ILRGLKDRYEVHHGVRITDSALVAAATLSDRYI--TARFLPD 389 Query: 352 CDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXX 411 +L D+A + LKME + +I+E+E +VR + E + DEA +E Sbjct: 390 KAIDLVDEA--ASRLKMEIDSRPVEIDEVERLVRRLEIEEMALAKEEDEASKE------- 440 Query: 412 XXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFD 457 + KLR SE ++++ L E +N + D Sbjct: 441 --------------RLEKLR-SELADQKEKLAELTTRWQNEKNAID 471 >gi|71076302|ref|XP_770671.1| hypothetical protein GLP_159_63855_61666 [Giardia lamblia ATCC 50803] Length = 729 Score = 39.8 bits (92), Expect = 0.17 Identities = 35/123 (28%), Positives = 48/123 (39%), Gaps = 5/123 (4%) Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 N + D ++VV + K R F S L C+ ELE + V +LK + Sbjct: 453 NRRVSDLYDNLTDLKVVHDTKCREFNSLLSSLKQCEGELEQRINEVANLKSRIVIMTESM 512 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYL--KLR-LSE 434 +E E R Q E DM +L+ + +EAE T K KLR L E Sbjct: 513 DERER--RNMQLERDMQRLQGNIRCKEAEIESTRRVVDQLAIESQNTRKEAEEKLRILRE 570 Query: 435 AEE 437 E Sbjct: 571 TEA 573 >gi|50946359|ref|XP_482707.1| fiber protein-like [Oryza sativa (japonica cultivar-group)] Length = 683 Score = 39.4 bits (91), Expect = 0.19 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 8/61 (13%) Query: 156 MCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIAC 215 C++C +S W+ C +C W H C R+GL + K + + + C C Sbjct: 605 CCLLCH----SSAPGDWVNCGLCGEWAHFGCDRRQGL----GTFKDYAKTDGLEYICPHC 656 Query: 216 N 216 + Sbjct: 657 S 657 >gi|47229818|emb|CAG07014.1| unnamed protein product [Tetraodon nigroviridis] Length = 727 Score = 39.4 bits (91), Expect = 0.19 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 18/170 (10%) Query: 241 LIKELDFVRKIF-RG--SEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDS 297 + E+D +R++ RG +++AR K L + K + KL + A QE + Sbjct: 537 VCPEIDTLRQMLYRGMDTKEAREKVLQEIIR-MRVKQEEKLAAAVQAKR---SLQQELEF 592 Query: 298 DSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE 357 + + + A ++ EI + D RKM + E R K +RE + Sbjct: 593 VKVAKKGRLREAIEAKRNLRKEIERLRVDWERKMRDMVET-CRRLKGEL------ERERQ 645 Query: 358 DKAC-AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-EARREA 405 +AC + + R K QIEEL V+L+QAEAD QL+ + + REA Sbjct: 646 LRACDEGCEAERLRIKYSAQIEELH--VQLQQAEADREQLRQELQQEREA 693 >gi|47219426|emb|CAG10790.1| unnamed protein product [Tetraodon nigroviridis] Length = 1776 Score = 39.4 bits (91), Expect = 0.21 Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 6/47 (12%) Query: 141 DCDICSNKKGFCNLCMCVICSK-FDFASNTCRWIGCDVCSHWCHTDC 186 DC + K FC IC K +D I C C+HW H C Sbjct: 295 DCTLLHKKGNFC-----TICHKCYDDNMRHAEMIQCSACNHWIHYSC 336 >gi|56784088|dbj|BAD81417.1| putative trithorax 3 [Oryza sativa (japonica cultivar-group)] Length = 991 Score = 39.4 bits (91), Expect = 0.21 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 8/67 (11%) Query: 130 ACQNLLPADDCDCDICSNKKGFCNLCM--------CVICSKFDFASNTCRWIGCDVCSHW 181 +C N +P + ++ C C C IC K ++ W+ CD C W Sbjct: 344 SCGNRVPPKIAKKKKQAGEQLLCRHCDKLLQSKQYCGICKKIWHHTDGGNWVCCDECQIW 403 Query: 182 CHTDCAI 188 H +C + Sbjct: 404 VHVECDL 410 >gi|73964058|ref|XP_868606.1| PREDICTED: similar to Cdc42 binding protein kinase beta isoform 3 [Canis familiaris] Length = 1551 Score = 39.4 bits (91), Expect = 0.21 Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 38/257 (14%) Query: 229 FQHCAPNWDFEALIKE-LDFVRKI---------FRGSEDARGKKLFWK----ADELIEKL 274 Q A L +E L+ RK+ GS A G K +E IE+L Sbjct: 438 LQVEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSTRALGSSARDKEIKKLNEEIERL 497 Query: 275 KSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 K+K+ D N + Q D+ + E+ + + + + ++ K V Sbjct: 498 KNKIAD----SNRLER--QLEDTVTLRQEHEDSTHRLKGLEKQYRVVRQEKEVFHKQLVE 551 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A E+++ + L ++ + ++L + + Q +++ +R K+ E ++ Sbjct: 552 ASERLKSQARE---LKDAHQQRKLALQEFSELNERMAELRSQKQKVSRQLRDKEEEVEVA 608 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEELKAQENS 452 K D R+E K L+ RL +A E R+ E + Sbjct: 609 MQKIDSMRQEIRKSEKF-------------RKELEARLEDAVAEASRERKLREHSENFSK 655 Query: 453 QCDFDPMKMRMESEIRG 469 Q + + ++M+ RG Sbjct: 656 QVESELEALKMKQGGRG 672 >gi|26348883|dbj|BAC38081.1| unnamed protein product [Mus musculus] Length = 516 Score = 39.4 bits (91), Expect = 0.22 Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 2/52 (3%) Query: 135 LPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 L +D +CD+C C C K + + CD C+ H C Sbjct: 325 LRKNDPECDLCGGDPD--KTCHMCSCHKCGEKRDPNMQLLCDECNMAYHIYC 374 >gi|40849896|gb|AAR95660.1| plectin 6 [Rattus norvegicus] Length = 4688 Score = 39.4 bits (91), Expect = 0.23 Identities = 49/242 (20%), Positives = 84/242 (34%), Gaps = 25/242 (10%) Query: 236 WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQEC 295 E +EL+ R++ G+ R E + + L Sbjct: 1826 RQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQL------------L 1873 Query: 296 DSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRE 355 + + L++ Q+ E+A+V +MEV+ K R +++RS + + Sbjct: 1874 EEELARLQHEATAATQKRQELEAELAKV----RAEMEVLLASKARAEEESRSTSEKSKQR 1929 Query: 356 LEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXX 415 LE +A +L E + + EE + +L AE D A R EAE Sbjct: 1930 LEAEAGRFRELAEEAARLRALAEEAKRQRQL--AEED-----AARQRAEAERVLTEKLAA 1982 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPM--KMRMESEIRGLLKG 473 T + L+ EAE R E +A + + + K +E + L K Sbjct: 1983 ISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKA 2042 Query: 474 ME 475 E Sbjct: 2043 SE 2044 Score = 38.6 bits (89), Expect = 0.42 Identities = 41/180 (22%), Positives = 71/180 (39%), Gaps = 46/180 (25%) Query: 230 QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFIL 289 Q A + +E+ VR +E RG A++ ++ L+++ Sbjct: 1580 QVEAAERSRMRIEEEIRVVRLQLETTERQRGG-----AEDELQALRAR------------ 1622 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 E E A ++A +V ++ RK + AE +R+ +A + Sbjct: 1623 ------------AEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVKAEAEAA- 1669 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD---MFQLKADEARREAE 406 RE + A+ +LK+ Q EE E RL+QAEA+ Q+ + A+R AE Sbjct: 1670 ----REKQRALQALDELKL-------QAEEAER--RLRQAEAERARQVQVALETAQRSAE 1716 >gi|47225576|emb|CAG12059.1| unnamed protein product [Tetraodon nigroviridis] Length = 1216 Score = 39.0 bits (90), Expect = 0.25 Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 9/48 (18%) Query: 148 KKGFCNLCM--------CVICSK-FDFASNTCRWIGCDVCSHWCHTDC 186 +KG C C C IC K ++ + + C C+HW H C Sbjct: 1060 EKGLCQDCSKLFEMGNYCPICFKCYEDNDYDSQMMQCGTCNHWVHAKC 1107 >gi|71987502|ref|NP_001022121.1| F26H11.2g [Caenorhabditis elegans] Length = 413 Score = 39.0 bits (90), Expect = 0.25 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 16/98 (16%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNL--CMCVICSK-FDFASNTCRWIGCDVCSHWC 182 C +A Q +L + C+ C ++ + +C K +D ++GCD C W Sbjct: 147 CVGVAEQTILGLEHWSCEECIEEQERVKDQPALYCVCQKPYDDTK---FYVGCDSCQGWF 203 Query: 183 HTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSE 220 H +C +G + A + ++C AC +E Sbjct: 204 HPEC--------VGTTRAEAEQAAD--YNCPACTREAE 231 >gi|28950021|emb|CAD70776.1| probable kinesin-related protein KLPA [Neurospora crassa] Length = 830 Score = 39.0 bits (90), Expect = 0.27 Identities = 42/223 (18%), Positives = 81/223 (36%), Gaps = 25/223 (11%) Query: 266 KADELIEKLKSKLIDPLDACNFILMFFQEC---DSDSPSLENGEGGFLIAPQDACNEIAE 322 + ++ K+ +D L+A L E + D+ + + + Q +E Sbjct: 237 AMETAVQMAKN-QVDTLEAERQKLNERNELLQKEMDALRQQFQQLTLTLERQKMDHEY-- 293 Query: 323 VVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED-------------KACAVTDLKME 369 +Q+ +R+ E +E R K+ L +RE +D KA A +++ Sbjct: 294 QLQNKSREHEHEVQELQRKLKQESERLQRINREEKDAFERQCRADLEGEKAKAAKEVQDL 353 Query: 370 RQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLK 429 R K + +++ + K+ E Q + D+ R E T+ K Sbjct: 354 RLKLGAEQQDINKSLLEKERELRQLQSQLDDLRSELSQEQKNKRALQEQINEMATTN-GK 412 Query: 430 LRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLK 472 L E R Q L ++ E+ +ME+ +R L+ Sbjct: 413 L-----EARNQGLRAQIDFLESDSKQQSDSFAQMEARLREALE 450 >gi|71414808|ref|XP_809492.1| vesicular transport-associated repeat protein, putative [Trypanosoma cruzi] Length = 1174 Score = 39.0 bits (90), Expect = 0.27 Identities = 37/150 (24%), Positives = 54/150 (36%), Gaps = 4/150 (2%) Query: 303 ENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA---RSVLDACDRELEDK 359 E E L +AE + R E AE + ++A R +A R L ++ Sbjct: 734 EEAEARRLAEEAAEARRLAEEAAEARRLAEEAAEARRLAEEEAEARRLAEEAEARRLAEE 793 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRL-KQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 A L E + + EE RL ++AEA +A EARR AE Sbjct: 794 AAEARRLAEEAAEARRLAEEAAEARRLAEEAEARRLAEEAAEARRLAEEAEARRLAEEAA 853 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 + + R E + L EE +A Sbjct: 854 EARRLAEEAAEARRLAEEAEARRLAEEAEA 883 Score = 37.9 bits (87), Expect = 0.69 Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 4/149 (2%) Query: 303 ENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA---RSVLDACDRELEDK 359 E E L +AE + R E AE + ++A R +A R L ++ Sbjct: 582 EEAEARRLAEEAAEARRLAEEAAEARRLAEEAAEARRLAEEEAEARRLAEEAEARRLAEE 641 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A L E + + EE E+ ++AEA +A EARR AE Sbjct: 642 A-EARRLAEEAAEARRLAEEAEARRLAEEAEARRLAEEAAEARRLAEEAEARRLAEEAAE 700 Query: 420 XXXYTSKYLKLRLSEAEERRQYLFEELKA 448 T + + R E + L EE +A Sbjct: 701 ARRLTEEAAEARRLAEEAEARRLAEEAEA 729 >gi|47228685|emb|CAG07417.1| unnamed protein product [Tetraodon nigroviridis] Length = 4301 Score = 39.0 bits (90), Expect = 0.28 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 7/83 (8%) Query: 154 LCM-CVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHC 212 C+ C++C AS+ R + CD C HT C L H+ + C Sbjct: 232 RCLECIVCEMCGKASDPSRLLLCDDCDVSYHTYC-----LEPPLHNVPKGGWKCKWCVCC 286 Query: 213 IACNHTSELFGF-VKDVFQHCAP 234 + C + F ++ + HC P Sbjct: 287 VQCGSNTPGFHCEWQNNYTHCGP 309 >gi|23481616|gb|EAA17840.1| Bromodomain, putative [Plasmodium yoelii yoelii] Length = 4805 Score = 39.0 bits (90), Expect = 0.28 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 26/87 (29%) Query: 119 EIFLYKRCRNIACQNLLPADDCD----CDICSNKKGFCNLCM------------CVICS- 161 +I+L+ N C + L CD C I N+ C C+IC+ Sbjct: 1389 DIYLF----NWKCDDCLKCSKCDYSNLCFINYNEWELHLDCCINCYKEYEKKNFCIICNE 1444 Query: 162 --KFDFASNTCRWIGCDVCSHWCHTDC 186 K D ++ +W+ CDVC W H C Sbjct: 1445 KYKVDDSN---KWVECDVCKFWIHLSC 1468 >gi|42567196|ref|NP_194520.3| PHD finger protein-related / SET domain-containing protein (TX4) [Arabidopsis thaliana] Length = 1027 Score = 39.0 bits (90), Expect = 0.29 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 12/88 (13%) Query: 132 QNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC-AIRE 190 ++L+P D C CS + +C IC K + W+ CD C H +C I + Sbjct: 378 KDLIPGDQLLCKPCSRLTK--SKHICGICKKIRNHLDNKSWVRCDGCKVRIHAECDQISD 435 Query: 191 GLIKMGHSAKGASGMTEMLFHCIACNHT 218 +K + E ++C C Sbjct: 436 RHLK---------DLRETDYYCPTCRAK 454 >gi|66850677|gb|EAL91004.1| PHD-finger domain protein [Aspergillus fumigatus Af293] Length = 775 Score = 39.0 bits (90), Expect = 0.29 Identities = 13/61 (21%), Positives = 19/61 (31%), Gaps = 14/61 (22%) Query: 158 VICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNH 217 +C D I C+ C+HW HT C ++ C+ C Sbjct: 699 CVCQSMDN--GGHLMIQCESCNHWLHTKC------------VGLERSNLPSVYVCVFCAQ 744 Query: 218 T 218 T Sbjct: 745 T 745 >gi|3540281|gb|AAC34383.1| All-1 related protein [Takifugu rubripes] Length = 4823 Score = 39.0 bits (90), Expect = 0.29 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 7/83 (8%) Query: 154 LCM-CVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHC 212 C+ C++C AS+ R + CD C HT C L H+ + C Sbjct: 732 RCLECIVCEMCGKASDPSRLLLCDDCDVSYHTYC-----LDPPLHNVPKGGWKCKWCVCC 786 Query: 213 IACNHTSELFGF-VKDVFQHCAP 234 + C + F ++ + HC P Sbjct: 787 VQCGSNTPGFHCEWQNNYTHCGP 809 >gi|3367791|emb|CAA20056.1| SPBC1685.08 [Schizosaccharomyces pombe] Length = 424 Score = 39.0 bits (90), Expect = 0.30 Identities = 14/33 (42%), Positives = 18/33 (54%) Query: 154 LCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 C+C I D AS+ +I CD CS W H +C Sbjct: 50 RCVCGIVESDDEASDGGLYIQCDQCSVWQHGNC 82 >gi|50233868|ref|NP_055771.3| hypothetical protein LOC22897 [Homo sapiens] Length = 1460 Score = 39.0 bits (90), Expect = 0.31 Identities = 42/246 (17%), Positives = 91/246 (36%), Gaps = 44/246 (17%) Query: 244 ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFIL------MFFQECDS 297 L ++R + S A ++ + + ++KL+ +L A L M Q + Sbjct: 669 RLSWLRAQVQSSTQADEDQIRAEQEASLQKLREELESQQKAERASLEQKNRQMLEQLKEE 728 Query: 298 DSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMR-MFKKARSVLDACDRE- 355 S ++ + A + A ++ E ++ ++ E++ ++ S L+A RE Sbjct: 729 IEASEKSEQAALNAAKEKALQQLREQLEGERKEAVATLEKEHSAELERLCSSLEAKHREV 788 Query: 356 ---LEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXX 412 L+ K +QK++ Q+++ L Q E + Q A E E Sbjct: 789 VSSLQKKIQEA------QQKEEAQLQKC-----LGQVEHRVHQKSYHVAGYEHEL----- 832 Query: 413 XXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA-----QENSQCDFDPMKMRMESEI 467 S L+ + E E + +++K ++ ++ + + +E+ Sbjct: 833 ------------SSLLREKRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAEL 880 Query: 468 RGLLKG 473 G L G Sbjct: 881 LGHLTG 886 >gi|71987495|ref|NP_001022120.1| F26H11.2f [Caenorhabditis elegans] Length = 510 Score = 39.0 bits (90), Expect = 0.31 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 16/98 (16%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNL--CMCVICSK-FDFASNTCRWIGCDVCSHWC 182 C +A Q +L + C+ C ++ + +C K +D ++GCD C W Sbjct: 244 CVGVAEQTILGLEHWSCEECIEEQERVKDQPALYCVCQKPYDDTK---FYVGCDSCQGWF 300 Query: 183 HTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSE 220 H +C +G + A + ++C AC +E Sbjct: 301 HPEC--------VGTTRAEAEQAAD--YNCPACTREAE 328 >gi|62642163|ref|XP_219801.3| PREDICTED: similar to Np95-like ring finger protein [Rattus norvegicus] Length = 803 Score = 39.0 bits (90), Expect = 0.32 Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 2/52 (3%) Query: 135 LPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 L +D +CD+C C C K + + CD C+ H C Sbjct: 325 LRKNDPECDLCGGDPD--KTCHMCSCHKCGEKRDPNMQLLCDECNMAYHIYC 374 >gi|33151758|ref|NP_873111.1| ATP-dependant Clp protease chain B [Haemophilus ducreyi 35000HP] Length = 856 Score = 38.6 bits (89), Expect = 0.33 Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 18/119 (15%) Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 FQ+ D PS+E+ ++ EI VQ T + A R Sbjct: 331 FQKVLVDEPSVEDTIA--ILRGLKERYEIHHHVQITDPAIVAAATLSHRYIS-------- 380 Query: 352 CDRELEDKA-----CAVTDLKMERQKKKPQIEELES-IVRLKQAEADMFQLKADEARRE 404 DR+L DKA A + L+ME K +++LE I++LK E Q + DEA R+ Sbjct: 381 -DRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLK-LERQALQKEKDEASRQ 437 >gi|3763931|gb|AAC64311.1| hypothetical protein [Arabidopsis thaliana] Length = 538 Score = 38.6 bits (89), Expect = 0.33 Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 12/71 (16%) Query: 157 CVICSKFDFASNTCRWI-GCDVCSHWCHTDCAIREGL-IKMGHSAKGASGMTEMLF---- 210 C IC + +N RW CD C CH +C + L IK G K E+ F Sbjct: 442 CEIC---EAETNPERWFYTCDDCGVVCHIECVTGDFLNIKPGIIMKNRENKFEVGFNDHD 498 Query: 211 ---HCIACNHT 218 C C Sbjct: 499 SRPKCTDCGSR 509 >gi|66847177|gb|EAL87508.1| conserved hypothetical protein [Aspergillus fumigatus Af293] Length = 1559 Score = 38.6 bits (89), Expect = 0.35 Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 8/88 (9%) Query: 308 GFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 L+ Q A E A +Q +ME ++++R ++ S L+ E+E K + +L+ Sbjct: 1186 PALVEKQSALQEEAANLQQLTDEMESCDQDELRNAREKLSSLED---EIELKKKQLQELQ 1242 Query: 368 MERQKKKPQIEE-----LESIVRLKQAE 390 + Q+K +E E + ++K+AE Sbjct: 1243 GQVQEKTNSLESGAELKAEFLAQIKEAE 1270 >gi|7294443|gb|AAF49788.1| CG9206-PA [Drosophila melanogaster] Length = 1265 Score = 38.6 bits (89), Expect = 0.35 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 14/87 (16%) Query: 298 DSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE 357 DSP L E L Q+ + + R ++ A +K + K +ELE Sbjct: 374 DSPGLSTYEFKQL-EQQNIRLK-----ETLVRLRDLSAHDKHDIQK--------LSKELE 419 Query: 358 DKACAVTDLKMERQKKKPQIEELESIV 384 K VT+L+ ++K +I+ELE+IV Sbjct: 420 MKRSEVTELERTKEKLSAKIDELEAIV 446 >gi|71412527|ref|XP_808444.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 1104 Score = 38.6 bits (89), Expect = 0.36 Identities = 43/252 (17%), Positives = 94/252 (37%), Gaps = 40/252 (15%) Query: 249 RKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGG 308 ++I E L + +++ +L + LDA N L +E +++ + G Sbjct: 344 QRILNSHERT----LHEIQNSHRAQVR-RLEETLDASNRQL---REMETEVQQYKTKLAG 395 Query: 309 FLIAPQDACN---EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 + P A + E ++ +++ + K R+ +++R + CD KA Sbjct: 396 ATLKPSSASADELRLREELRTIRKQLNEAVDAKQRLERRSREIEQECDDGR--KAQQALQ 453 Query: 366 LKME----------RQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXX 415 L+ME R ++ + ++ + ++A A+ Q R+ Sbjct: 454 LEMEALTVRHDAELRSLREESQQLMDQLTSAREAHAEELQQVRKNQRKSESAVTRDAAKE 513 Query: 416 XXXXXXXYTSKYLKLR-------------LSEAEER---RQYLFE-ELKAQENSQCDFDP 458 ++ + R L EAE+R +Q E EL+ E ++ D + Sbjct: 514 FETTFRRMNERHEEARRALELEKGQLVRQLREAEQRCEDKQRRLEIELEKSEAARRDGER 573 Query: 459 MKMRMESEIRGL 470 ++ + + + R L Sbjct: 574 IQQKHDEKDRAL 585 >gi|50789970|ref|XP_423552.1| PREDICTED: similar to Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein), partial [Gallus gallus] Length = 1175 Score = 38.6 bits (89), Expect = 0.40 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 7/83 (8%) Query: 154 LCM-CVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHC 212 C+ C++C AS+ R + CD C HT C L + + C Sbjct: 871 RCVECIVCEVCGKASDPSRLLLCDDCDISYHTYC-----LDPPLQTVPKGGWKCKWCVCC 925 Query: 213 IACNHTSELFGF-VKDVFQHCAP 234 + C S F ++ + HCAP Sbjct: 926 VQCGAASPGFHCEWQNNYTHCAP 948 >PHD_Q8GZ42_415-469_PF00628.16 Length = 55 Score = 38.2 bits (88), Expect = 0.42 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 8/62 (12%) Query: 157 CVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACN 216 C IC + ++ W+ CD C W H+ C I H + E ++C C Sbjct: 2 CGICKRIWNHLDSQSWVRCDGCKVWIHSAC----DQISHKHFK----DLGETDYYCPTCR 53 Query: 217 HT 218 Sbjct: 54 TK 55 >gi|23485476|gb|EAA20445.1| hypothetical protein [Plasmodium yoelii yoelii] Length = 470 Score = 38.2 bits (88), Expect = 0.42 Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 5/145 (3%) Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ 395 + K R + R + +ELE K V D K E + K+ ++E + V KQ E + Q Sbjct: 168 DNKQRELDEKRKETEHIKKELEGKNKEVEDKKKEVESKQKEVESKQREVESKQKEVESKQ 227 Query: 396 LKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE----ERRQYLFE-ELKAQE 450 + + ++E E + + E++ E +Q E + K E Sbjct: 228 KEVESKQKEVESKQKEVETKQKEVESKQKEVETQQKEVESKQKEVESKQKEVESKQKDIE 287 Query: 451 NSQCDFDPMKMRMESEIRGLLKGME 475 N + + K+ +EI + K +E Sbjct: 288 NREKESKETKVETPNEIEQMKKNIE 312 >gi|62657239|ref|XP_221050.3| PREDICTED: similar to fetal Alzheimer antigen isoform 2 [Rattus norvegicus] Length = 3781 Score = 38.2 bits (88), Expect = 0.44 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 16/77 (20%) Query: 158 VICSK-FDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACN 216 IC +D + +IGCD+C++W H DC +G + K A M ++ C C Sbjct: 3558 CICKTPYDESK---FYIGCDLCTNWYHGDC--------VGITEKEAKKMD--VYICNDCK 3604 Query: 217 HTSELFGFVKDVFQHCA 233 E G ++++ C Sbjct: 3605 RAQE--GSSEELYCICR 3619 >gi|50749859|ref|XP_421787.1| PREDICTED: similar to eukaryotic translation initiation factor 3, subunit 10 theta, 150/170kDa; eukaryotic translation initiation factor 3, subunit 10 (theta, 170kD); Eukaryotic translation initiation factor 3, subunit 10, 170kD; eukaryotic translation initia... [Gallus gallus] Length = 1468 Score = 38.2 bits (88), Expect = 0.48 Identities = 52/270 (19%), Positives = 100/270 (37%), Gaps = 48/270 (17%) Query: 215 CNHTSELFGFVKDV------FQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKL----- 263 C+ S++ +VKD Q P+ +++ L V +I++ E +R L Sbjct: 498 CSRVSKVLNWVKDQAEKEPELQLYVPHLQNNTILRLLQQVAQIYQSIEFSRLATLVPFVD 557 Query: 264 -FWKADELIEKLKS-KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDA--CNE 319 F +++ + L LD L F + + S + G L + N+ Sbjct: 558 AFQLERSIVDAARHCDLQVRLDHTTRTLSFGSDLNY-STREDAPLGPQLQSMPSEQIRNQ 616 Query: 320 IAEVVQDTARKMEVVAEEKMRMFKK--ARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 + + A+ + V+ + K+ + + A L++ + RQ + + Sbjct: 617 LTAMSSALAKALAVIKPPHLLQEKEEQHQLAVTAF---LKNSRKEHQRILARRQTIEERK 673 Query: 378 EELES--IVR----LKQAEADMFQL-KADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL 430 E LES I R L+Q EA++ ++ KA+E R E + + Sbjct: 674 ERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAK----------------EREKER 717 Query: 431 RLSEAEERR----QYLFEELKAQENSQCDF 456 L E E+ + + E++K E F Sbjct: 718 ILQEHEQIKKKTVRERLEQIKKTELGAKAF 747 >gi|68403377|ref|XP_689156.1| PREDICTED: similar to myeloid/lymphoid or mixed-lineage leukemia 3 [Danio rerio] Length = 1037 Score = 38.2 bits (88), Expect = 0.49 Identities = 22/108 (20%), Positives = 33/108 (30%), Gaps = 18/108 (16%) Query: 125 RCRNIACQNLLPADDCDCDICSNKKGFCNLC--------MCVICSKFDFASNTCRWIGCD 176 RC+N C+ S+ C C +C+IC + + + C Sbjct: 605 RCKN--CRTCAQCGMRPNGQWSSNGVMCEGCQQQHESALLCLICGQSQDSGSPADKHTCC 662 Query: 177 VCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGF 224 C W H DC +EG + + C AC E Sbjct: 663 TCKRWVHVDCVRQEGT--------NPDTQLQDGYTCRACKQVEEETRH 702 >gi|68070837|ref|XP_677332.1| SET-domain protein, putative [Plasmodium berghei] Length = 1439 Score = 38.2 bits (88), Expect = 0.50 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 26/87 (29%) Query: 119 EIFLYKRCRNIACQNLLPADDCD----CDICSNKKGFCNLCM------------CVICS- 161 +I+L+ N C + L CD C I N+ C C+IC+ Sbjct: 1021 DIYLF----NWKCDDCLKCSKCDYSNLCFINYNEWELHLDCCINCYKEYEKKNFCIICNE 1076 Query: 162 --KFDFASNTCRWIGCDVCSHWCHTDC 186 K D ++ +W+ CDVC W H C Sbjct: 1077 KYKVDDSN---KWVECDVCKFWIHLSC 1100 >gi|66362080|ref|XP_628004.1| chromatin protein with an AT hook and a PHD finger domain at the C-terminus [Cryptosporidium parvum] Length = 2876 Score = 38.2 bits (88), Expect = 0.50 Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 12/75 (16%) Query: 157 CVICSKFDFASNT---------CRWIGCDVCSHWCHTDC---AIREGLIKMGHSAKGASG 204 C ICS F +T WI C+ CS W H DC + + S S Sbjct: 1942 CSICSNFRKRKHTNNISPLNCNSSWIVCEECSRWYHQDCVGYSSKSNNFPEKLSNGSNSA 2001 Query: 205 MTEMLFHCIACNHTS 219 + C +C+ S Sbjct: 2002 NELSSWTCPSCSLRS 2016 >gi|50256336|gb|EAL19061.1| hypothetical protein CNBH1630 [Cryptococcus neoformans var. neoformans B-3501A] Length = 752 Score = 38.2 bits (88), Expect = 0.51 Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 11/51 (21%) Query: 143 DICSNKKGF--CNLC-----MCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 DI K F C C C IC K W+GC C H H C Sbjct: 614 DIEVKGKIFWWCKKCRTGAKSCAICRKI--IKG--LWMGCRQCGHGGHQAC 660 >gi|2266904|gb|AAC24651.1| hypothetical protein, conserved [Leishmania major strain Friedlin] Length = 743 Score = 37.9 bits (87), Expect = 0.55 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 10/60 (16%) Query: 129 IACQNLLPADDCDCDICS-NKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCA 187 ++C LP+ +C +C + N C +C ++ W+ C +C H C Sbjct: 399 LSCYAQLPSGSAECPLCRFSVYDLLNDARCKVCGTYED-----LWV-CLICG---HVACG 449 >gi|73970968|ref|XP_864358.1| PREDICTED: similar to Np95-like ring finger protein isoform b isoform 3 [Canis familiaris] Length = 752 Score = 37.9 bits (87), Expect = 0.56 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 7/59 (11%) Query: 129 IACQNLLPADDCDCDICSNKK-GFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 + CQ +D +CDIC C C C IC + CD C+ H C Sbjct: 281 LTCQRK---NDPECDICGGDPNKNCRSCSCHICGG---KQEPNMQLLCDECNMAYHIYC 333 >gi|42631176|ref|ZP_00156714.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Haemophilus influenzae R2866] Length = 856 Score = 37.9 bits (87), Expect = 0.58 Identities = 48/197 (24%), Positives = 70/197 (35%), Gaps = 28/197 (14%) Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 FQ+ D PS+E+ ++ EI V T + A R Sbjct: 333 FQKVFVDEPSVEDTIA--ILRGLKERYEIHHHVDITDPAIVAAATLSHRYIS-------- 382 Query: 352 CDRELEDKA-----CAVTDLKMERQKKKPQIEELES-IVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++ME K ++ LE I++LK E Q + DEA R+ Sbjct: 383 -DRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLK-LEQQALQKEEDEASRK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTS-----KYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMK 460 Y K K LS ++ +Q L E ++ D K Sbjct: 440 --RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAK 497 Query: 461 M--RMESEIRGLLKGME 475 M I L K +E Sbjct: 498 MSELQYGRIPALEKQLE 514 >gi|73970972|ref|XP_864401.1| PREDICTED: similar to Np95-like ring finger protein isoform b isoform 5 [Canis familiaris] Length = 774 Score = 37.9 bits (87), Expect = 0.59 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 4/53 (7%) Query: 135 LPADDCDCDICSNKK-GFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 L +D +CDIC C C C IC + CD C+ H C Sbjct: 294 LRKNDPECDICGGDPNKNCRSCSCHICGG---KQEPNMQLLCDECNMAYHIYC 343 >gi|16265798|gb|AAL16644.1| nucleosome remodeling factor large subunit NURF301 [Drosophila melanogaster] Length = 2669 Score = 37.9 bits (87), Expect = 0.59 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 14/64 (21%) Query: 158 VICSK-FDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACN 216 IC +D ++GCD+CS+W H DC + + + + ++E F CI C Sbjct: 2442 CICRTPYDDTK---FYVGCDLCSNWFHGDC--------VSITEEASKKLSE--FICIDCK 2488 Query: 217 HTSE 220 E Sbjct: 2489 RARE 2492 >gi|68245567|gb|EAN27687.1| TonB, C-terminal [Magnetococcus sp. MC-1] Length = 335 Score = 37.9 bits (87), Expect = 0.59 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 23/143 (16%) Query: 323 VVQDTARKMEVVAEEKMRMFKKARSVLD---ACDRELEDKACAVTDLKMERQKKKPQIEE 379 VV++ + E V MR + + + A + L+ K L+ E KKK E+ Sbjct: 111 VVEEPDQPAEKVDITPMRRKPDPKKIAEEQRAKEEALKKKQAEEKRLQEEAAKKKQAEEQ 170 Query: 380 LESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR 439 + KQAE Q K +EAR++AE + ++ EA ++ Sbjct: 171 RKKEEARKQAEE---QRKKEEARKQAEIKRK--------------QELAAQQMREAIAKQ 213 Query: 440 QYLFEELKAQENSQCDFDPMKMR 462 Q E+KAQ+ + ++R Sbjct: 214 Q---AEIKAQQQREEAIRQQQLR 233 >gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 857 Score = 37.9 bits (87), Expect = 0.60 Identities = 42/193 (21%), Positives = 68/193 (35%), Gaps = 35/193 (18%) Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 FQ+ D P++E+ ++ EI VQ T + A R Sbjct: 331 FQKVLVDEPTVEDTIA--ILRGLKERYEIHHHVQITDPAIVAAATLSHRYIS-------- 380 Query: 352 CDRELEDKA-----CAVTDLKMERQKKKPQIEELES-IVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + L+ME K +++LE I++LK E Q + DEA R+ Sbjct: 381 -DRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLK-LERQALQKEEDEASRQR 438 Query: 406 -----EXXXXXXXXXXXXXXXXYTSKYLKL------------RLSEAEERRQYLFEELKA 448 E K L R+ + RR+ FE++ Sbjct: 439 LAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMSE 498 Query: 449 QENSQCDFDPMKM 461 + + ++ Sbjct: 499 LQYGKIPALEKQL 511 >gi|73970976|ref|XP_531928.2| PREDICTED: similar to Ubiquitin-like containing PHD and RING finger domains protein 2 (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) isoform 1 [Canis familiaris] Length = 805 Score = 37.9 bits (87), Expect = 0.60 Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 4/53 (7%) Query: 135 LPADDCDCDICSNKK-GFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 L +D +CDIC C C C IC + CD C+ H C Sbjct: 325 LRKNDPECDICGGDPNKNCRSCSCHICGG---KQEPNMQLLCDECNMAYHIYC 374 >gi|23612374|ref|NP_703954.1| SET-domain protein, putative [Plasmodium falciparum 3D7] Length = 6761 Score = 37.9 bits (87), Expect = 0.60 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 20/84 (23%) Query: 119 EIFLYKRCRNIACQNLLPADDCD----CDICSNKKGFCNLCM------------CVICSK 162 +I+L+ N C + L + C+ C I N+ C C++C++ Sbjct: 1714 DIYLF----NWKCDDCLKCNKCNYSNLCYINYNEWELHLDCCINCYKEYEKKNFCIMCNE 1769 Query: 163 FDFASNTCRWIGCDVCSHWCHTDC 186 ++ +W+ CDVC W H C Sbjct: 1770 KYDEDDSKKWVQCDVCKFWIHLSC 1793 >gi|23092680|gb|AAF47361.2| CG32346-PB, isoform B [Drosophila melanogaster] Length = 2649 Score = 37.9 bits (87), Expect = 0.61 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 14/64 (21%) Query: 158 VICSK-FDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACN 216 IC +D ++GCD+CS+W H DC + + + + ++E F CI C Sbjct: 2422 CICRTPYDDTK---FYVGCDLCSNWFHGDC--------VSITEEASKKLSE--FICIDCK 2468 Query: 217 HTSE 220 E Sbjct: 2469 RARE 2472 >gi|50551621|ref|XP_503285.1| hypothetical protein [Yarrowia lipolytica] Length = 487 Score = 37.9 bits (87), Expect = 0.61 Identities = 18/67 (26%), Positives = 23/67 (34%), Gaps = 15/67 (22%) Query: 158 VICSKFDFASNTCRW-IGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACN 216 +C + D W IGCD C W H C +G + A F C C Sbjct: 174 CVCRRPDDGK----WMIGCDYCEEWIHGSC--------VGITP--ARAKLMHKFCCPYCT 219 Query: 217 HTSELFG 223 H +E Sbjct: 220 HKAEKMR 226 >gi|34785071|gb|AAH56775.1| Hypothetical protein MGC63512 [Danio rerio] Length = 570 Score = 37.9 bits (87), Expect = 0.62 Identities = 27/126 (21%), Positives = 40/126 (31%), Gaps = 16/126 (12%) Query: 158 VICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNH 217 +C + D C IGCD CS W H DC + T +++C C Sbjct: 27 CVCRRPDIN---CFMIGCDSCSEWFHGDC----------IKISEKTAKTIRVWYCEKCRS 73 Query: 218 TSELFGFV---KDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL 274 E K + A + DF RGS R ++ + + + Sbjct: 74 KDETLEVKYRPKKSREKEAETDGPDTQPDTPDFKSDGRRGSRIKRSARMCGECEACLRTE 133 Query: 275 KSKLID 280 L D Sbjct: 134 DCGLCD 139 >gi|60101451|gb|AAX13804.1| guanylate binding protein 1 [Cercopithecus aethiops] Length = 590 Score = 37.9 bits (87), Expect = 0.62 Identities = 47/211 (22%), Positives = 81/211 (38%), Gaps = 35/211 (16%) Query: 275 KSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK---- 330 K D C+ +L D SP LE + + + +QD +K Sbjct: 395 KQNQEASSDRCSALLQ-----DIFSP-LEEEVKMGIYSKPGGYRLFIQKLQDLKKKYYEE 448 Query: 331 --MEVVAEEKMRMFKKAR-SVLDA---CDRELEDKACAVTDLKMERQKKKPQIEELESIV 384 + AEE ++ + K++ S+ DA D+ L +K ++++ER K + Sbjct: 449 PRKGIQAEEILQTYLKSKESMTDAILQTDQTLTEKEK---EIEVERVKAESA-------- 497 Query: 385 RLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE 444 QA M Q E +R+ E T K + R +E+ + L Sbjct: 498 ---QASTKMLQ----EIQRKNEQMMEQKERSYQEHLKQLTEKMERDRAQLLKEQERTLAL 550 Query: 445 ELKAQENSQCDFDPMKMR-MESEIRGLLKGM 474 +L+ QE + + R M++EI+ L K M Sbjct: 551 KLQEQERLLKEGFQTESRKMQNEIQDLQKKM 581 >gi|62739288|gb|AAH94105.1| LOC432234 protein [Xenopus laevis] Length = 598 Score = 37.9 bits (87), Expect = 0.66 Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 4/47 (8%) Query: 141 DCDICSNKKG-FCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 +C C + C +C C IC + + + CD C H C Sbjct: 299 ECKHCKDNPKRACRMCACCICGG---KQDPEKQLLCDECDLAFHIYC 342 >gi|50294766|ref|XP_449794.1| unnamed protein product [Candida glabrata] Length = 607 Score = 37.9 bits (87), Expect = 0.70 Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 16/80 (20%) Query: 157 CVICSKFDFAS----NTC-RWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEML-- 209 C C D + I CD C W H +C ++ IK+ S + L Sbjct: 47 CSPCGTTDANYVEDEDPYGEMIQCDQCDTWQHINCMLQVKDIKV-PKELENSDDVDSLSK 105 Query: 210 --------FHCIACNHTSEL 221 ++C C + S+L Sbjct: 106 LLVNSEDKYYCDRCIYKSQL 125 >gi|2351219|dbj|BAA22067.1| myosin heavy chain [Cyprinus carpio] Length = 1933 Score = 37.5 bits (86), Expect = 0.76 Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 30/178 (16%) Query: 324 VQDTARKMEVVAEEKMRMFKK-----ARSVLDA--CDRELEDKACAVTDLKMERQKKKPQ 376 ++D +++ ++E R AR + R+LE+K V+ L +Q Q Sbjct: 1251 LEDQLSEIKAKSDENSRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQ 1310 Query: 377 IEEL----ESIVRLKQAEADMFQ-LKAD--------EARREAEXXXXXXXXXXXXXXXXY 423 IE+L E V+ K A A Q + D E +EA+ + Sbjct: 1311 IEDLKRHVEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRGMSKANSEVAQW 1370 Query: 424 TSKY---LKLRLSEAEERRQYLFEELKAQE------NSQCDF-DPMKMRMESEIRGLL 471 +KY R E EE ++ L + L+ E NS+C + K R++SE+ L+ Sbjct: 1371 RAKYETDAIQRTEELEESKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQSEVEDLM 1428 >gi|66847357|gb|EAL87688.1| PHD finger and JmjC domain protein, putative [Aspergillus fumigatus Af293] Length = 1418 Score = 37.5 bits (86), Expect = 0.78 Identities = 22/92 (23%), Positives = 26/92 (28%), Gaps = 9/92 (9%) Query: 136 PADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKM 195 P D D + N + C C V WI CD C W H CA Sbjct: 318 PRGDDDTESDENNQANCAACNLVRIPVDSEEQGDVTWISCDGCKQWFHIVCA-------- 369 Query: 196 GHSAKGASGMTEMLFHCIACNHTSELFGFVKD 227 G + F C C FV+ Sbjct: 370 GFKNDREIRTVD-KFICRRCRPIHGQTTFVRK 400 >PHD_Q5BEP4_671-718_PF00628.16 Length = 48 Score = 37.5 bits (86), Expect = 0.82 Identities = 15/61 (24%), Positives = 20/61 (32%), Gaps = 14/61 (22%) Query: 158 VICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNH 217 IC+ D I C+ CSHW HT C ++ C+ C Sbjct: 2 CICNSMDN--GGHLMIQCESCSHWLHTKC------------VGLERSNLPSVYVCVFCAQ 47 Query: 218 T 218 T Sbjct: 48 T 48 >gi|66526707|ref|XP_624402.1| PREDICTED: similar to CG6129-PB, isoform B [Apis mellifera] Length = 2052 Score = 37.5 bits (86), Expect = 0.91 Identities = 35/201 (17%), Positives = 80/201 (39%), Gaps = 23/201 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMR---MFKKARS 347 E + + ++E + + + N I ++ + R + E +++ K Sbjct: 1075 VLHEMEEEKNNVERVKREAAVKTEQERNNINQLRDELNRLKTKLDETRLKTDEEKIKLDL 1134 Query: 348 VLDACDRELEDKACAVTDLKMERQKKKPQIEEL-----ESIVRLKQAEADMFQLKADEAR 402 ++ +E E +L+++ + +++ L E+I +LK AE +E Sbjct: 1135 KIEELWKERELAQRESEELQVQLHMTEDKVDSLQNQLHETIRKLKDAE------NLNETL 1188 Query: 403 REAEXXXXXXXXXXXXXXXXYTSKYLKLRLS----EAEERRQYL-----FEELKAQENSQ 453 R+ Y S +LR E+E+R Q ++++ A E+ + Sbjct: 1189 RKELVDIRRQLGDSTYEKEKYNSSNKELREHVKRIESEKREQNRILEESYQKISALEDMK 1248 Query: 454 CDFDPMKMRMESEIRGLLKGM 474 + D + R++++IR + K M Sbjct: 1249 VNVDAERSRLQAQIRDMEKEM 1269 >gi|68360534|ref|XP_695735.1| PREDICTED: similar to pleckstrin homology-like domain, family B, member 1 [Danio rerio] Length = 1375 Score = 37.5 bits (86), Expect = 0.91 Identities = 40/202 (19%), Positives = 74/202 (36%), Gaps = 26/202 (12%) Query: 288 ILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRM------ 341 IL E + P + G + P + D + V + R Sbjct: 575 ILNLCAEYNKSDPPVGVDAGRVCLFPGMEEVSVRRPGPDP---VSVPGQSSHRQRESEED 631 Query: 342 -FKKARSVLDACDRELEDKA----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL 396 K+ S ++ +E ED + L+ ER + +++EL++ V D+ Q Sbjct: 632 NLKEECSSTESQHQEHEDTSVLGQQERVYLEEERLRILARVDELKTRV------TDLEQ- 684 Query: 397 KADEARREAEXXXXXXXXXXXXXXXXYTS-----KYLKLRLSEAEERRQYLFEELKAQEN 451 + E+R+EAE + L+L+L+E E Q E+ +A+ + Sbjct: 685 QIQESRQEAEMERALLQGERRAELDQVEAELEIINQLQLKLNEVENATQREKEKERAKVS 744 Query: 452 SQCDFDPMKMRMESEIRGLLKG 473 ++ D SE++G L Sbjct: 745 AERDVLARLKDSYSELKGQLHK 766 >gi|73979823|ref|XP_849291.1| PREDICTED: similar to Intersectin 2 (SH3 domain-containing protein 1B) (SH3P18) (SH3P18-like WASP associated protein) isoform 2 [Canis familiaris] Length = 1695 Score = 37.1 bits (85), Expect = 0.94 Identities = 49/253 (19%), Positives = 90/253 (35%), Gaps = 54/253 (21%) Query: 250 KIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGF 309 ++ + ++ + L + D I ++K + D N ++ E + ++N + G Sbjct: 513 RLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQDYQNKLIYLVPEKQLLNERIKNMQLGN 572 Query: 310 L------------IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR-------SVLD 350 + ++ C + E + D K +M F SVL Sbjct: 573 TPDLGIGLLHKKSLEKEELCQRLKEQL-DALEKETASKLSEMDSFNNQLKCGNMDDSVLQ 631 Query: 351 ACDRELEDKACA---VTDLKMERQKKKPQIEELESIVR--LKQAE---ADMFQLKA--DE 400 L + +L+ ++ +E+L I R LK+ E +++ Q K DE Sbjct: 632 CLLSLLSCLNNLFLLLKELRESYNTQQLALEQLHKIKRDKLKEIERKRSELIQKKKLEDE 691 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD----- 455 A R+A+ + L + EE +Q +E KAQE Q + Sbjct: 692 AIRKAKQGK---------------ENLWRESLRKEEEEKQKRLQEEKAQEKVQEEERKVE 736 Query: 456 ----FDPMKMRME 464 D KMR+E Sbjct: 737 EKQCKDKDKMRVE 749 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|8777406|dbj|BAA96996.1| unnamed protein product [Arabidopsis ... 686 0.0 gi|6466960|gb|AAF13095.1| unknown protein [Arabidopsis thaliana] 672 0.0 DUF1423_Q9LUB7_73-557_PF07227.1 672 0.0 DUF1423_Q9S736_74-548_PF07227.1 656 0.0 gi|30385713|gb|AAP22955.1| Potyvirus VPg interacting protein [Pi... 644 0.0 DUF1423_Q84N37_19-496_PF07227.1 638 0.0 gi|30385711|gb|AAP22954.1| Potyvirus VPg interacting protein [Ni... 629 e-179 DUF1423_Q84N38_72-549_PF07227.1 622 e-177 gi|8778236|gb|AAF79245.1| F10B6.14 [Arabidopsis thaliana] 605 e-172 DUF1423_Q9LQV7_285-755_PF07227.1 575 e-163 gi|20148719|gb|AAM10250.1| unknown protein [Arabidopsis thaliana] 574 e-162 gi|28973711|gb|AAO64172.1| unknown protein [Arabidopsis thaliana] 550 e-155 gi|7573333|emb|CAB87803.1| putative protein [Arabidopsis thaliana] 541 e-152 DUF1423_Q84TI3_497-969_PF07227.1 523 e-147 gi|50918667|ref|XP_469730.1| unknown protein [Oryza sativa (japo... 244 4e-63 gi|8778731|gb|AAF79739.1| T25N20.6 [Arabidopsis thaliana] 223 1e-56 gi|14583098|gb|AAK69758.1| CDPK adapter protein 1 [Mesembryanthe... 220 5e-56 gi|51535981|dbj|BAD38062.1| putative coiled-coil protein [Oryza ... 202 1e-50 gi|50942423|ref|XP_480739.1| putative coiled-coil protein [Oryza... 195 2e-48 gi|40804910|gb|AAR91717.1| vernalization insensitive 3 [Arabidop... 193 6e-48 gi|9294095|dbj|BAB01947.1| unnamed protein product [Arabidopsis ... 186 1e-45 gi|51038197|gb|AAT94000.1| unknow protein [Oryza sativa (japonic... 178 2e-43 gi|60547711|gb|AAX23819.1| hypothetical protein At2g18880 [Arabi... 161 4e-38 gi|33339558|gb|AAQ14302.1| ABRH1 [Marsilea quadrifolia] 159 1e-37 gi|7269920|emb|CAB81013.1| putative protein [Arabidopsis thaliana] 159 2e-37 gi|50759355|ref|XP_425739.1| PREDICTED: similar to C-ski protein... 146 9e-34 gi|18859373|ref|NP_571010.1| nuclear oncoprotein skia [Danio rerio] 144 7e-33 gi|41326957|emb|CAF20801.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 143 8e-33 gi|23494457|dbj|BAC19423.1| putative endopeptidase Clp ATP-bindi... 138 4e-31 gi|73956613|ref|XP_546730.2| PREDICTED: similar to Ski oncogene ... 133 8e-30 gi|4506967|ref|NP_003027.1| v-ski sarcoma viral oncogene homolog... 132 3e-29 DUF1423_Q7X9D9_31-147_PF07227.1 130 9e-29 gi|158818|gb|AAA29025.1| zinc-binding protein 129 2e-28 gi|1052593|emb|CAA90513.1| trithorax protein trxII [Drosophila m... 129 2e-28 gi|68351395|gb|EAN32158.1| hypothetical protein, conserved [Thei... 99 3e-19 Sequences not found previously or not previously below threshold: gi|1351069|sp|P49140|SKI_CHICK Ski oncogene (C-ski) 135 3e-30 gi|104548|pir||B32575 C-ski protein FB28 - chicken 134 5e-30 gi|6048269|emb|CAB58126.1| c-ski protein [Oreochromis aureus] 131 3e-29 gi|21322226|ref|NP_035515.1| Sloan-Kettering viral oncogene homo... 129 2e-28 gi|46329445|gb|AAH68305.1| Ski protein [Mus musculus] 127 5e-28 gi|62650161|ref|XP_233731.3| PREDICTED: similar to Ski protein [... 124 5e-27 gi|65101|emb|CAA48642.1| c-ski [Xenopus laevis] 124 6e-27 gi|38234653|ref|NP_940420.1| Putative ATP-dependent protease reg... 120 9e-26 gi|899254|emb|CAA90349.1| predicted trithorax protein [Drosophil... 118 3e-25 gi|55588008|ref|XP_524843.1| PREDICTED: similar to Ski oncogene ... 114 6e-24 gi|41409951|ref|NP_962787.1| ClpB [Mycobacterium avium subsp. pa... 114 7e-24 gi|68262865|emb|CAI36353.1| ATP-dependent Clp protease, ATP-bind... 113 1e-23 gi|4098131|gb|AAD00218.1| clpB [Mycobacterium bovis] 110 9e-23 gi|104547|pir||C32575 C-ski protein FB27 - chicken 99 2e-19 gi|54027376|ref|YP_121618.1| putative Clp protease ATP-binding s... 97 1e-18 gi|15828345|ref|NP_302608.1| heat shock protein [Mycobacterium l... 94 5e-18 gi|68229264|ref|ZP_00568461.1| AAA ATPase, central region:Clp, N... 94 7e-18 gi|68172762|ref|ZP_00546043.1| AAA ATPase, central region:Clp, N... 93 1e-17 gi|65304433|emb|CAI76812.1| hypothetical protein, conserved [The... 93 2e-17 gi|6048267|emb|CAB58125.1| c-ski protein [Oreochromis aureus] 91 9e-17 gi|72160604|ref|YP_288261.1| ATPase [Thermobifida fusca YX] 90 1e-16 gi|18859375|ref|NP_571013.1| nuclear oncoprotein skib [Danio rerio] 89 3e-16 gi|61679305|gb|AAX52932.1| ClpB [Bifidobacterium animalis subsp.... 86 2e-15 gi|24427167|emb|CAD55328.1| ATP-dependent protease ATP-binding s... 86 3e-15 gi|47229818|emb|CAG07014.1| unnamed protein product [Tetraodon n... 85 3e-15 gi|23335984|ref|ZP_00121214.1| COG0542: ATPases with chaperone a... 85 4e-15 gi|71368674|ref|ZP_00659163.1| AAA ATPase, central region:Clp, N... 85 5e-15 gi|55242025|gb|EAL40845.1| ENSANGP00000028094 [Anopheles gambiae... 84 8e-15 gi|55242024|gb|EAA08123.3| ENSANGP00000002662 [Anopheles gambiae... 84 8e-15 gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone a... 84 9e-15 gi|54035919|sp|Q9Z6E4|CLPB_STRAL Chaperone clpB 83 2e-14 gi|54035876|sp|Q8YM56|CLPB2_ANASP Chaperone clpB 2 82 3e-14 gi|33151758|ref|NP_873111.1| ATP-dependant Clp protease chain B ... 81 5e-14 gi|50843466|ref|YP_056693.1| ATP-dependent protease (Clp chapero... 81 5e-14 gi|885934|gb|AAB09631.1| ClpB 81 7e-14 gi|32452329|emb|CAD59396.1| putative ClpB1 protein [Propionibact... 81 7e-14 gi|42631176|ref|ZP_00156714.1| COG0542: ATPases with chaperone a... 81 8e-14 gi|37523146|ref|NP_926523.1| endopeptidase Clp ATP-binding chain... 80 1e-13 gi|72384775|gb|AAZ67679.1| chaperone putative [Haemophilus paras... 80 1e-13 gi|68369072|ref|XP_689552.1| PREDICTED: similar to nuclear oncop... 79 2e-13 gi|29608171|dbj|BAC72226.1| putative ATP-dependent Clp protease ... 79 3e-13 gi|26248955|ref|NP_754995.1| ClpB protein [Escherichia coli CFT073] 79 3e-13 gi|46156241|ref|ZP_00133175.2| COG0542: ATPases with chaperone a... 79 3e-13 gi|12722113|gb|AAK03788.1| ClpB [Pasteurella multocida subsp. mu... 79 3e-13 gi|28629052|gb|AAO49455.1| heat shock protein 78 [Leptosphaeria ... 79 4e-13 gi|71675495|ref|ZP_00673240.1| AAA ATPase, central region:Clp, N... 79 4e-13 gi|68538354|ref|ZP_00578132.1| AAA ATPase, central region:Clp, N... 78 4e-13 gi|74316833|ref|YP_314573.1| ClpB protein [Thiobacillus denitrif... 78 4e-13 gi|62662009|ref|XP_577460.1| PREDICTED: similar to Ski protein [... 78 5e-13 gi|62426046|ref|ZP_00381176.1| COG0542: ATPases with chaperone a... 78 5e-13 gi|73541668|ref|YP_296188.1| AAA ATPase, central region:Clp, N t... 78 7e-13 gi|67153835|ref|ZP_00415580.1| AAA ATPase, central region:Clp, N... 78 7e-13 gi|76164358|gb|EAO58508.1| AAA ATPase, central region:Clp, N ter... 78 7e-13 gi|50955821|ref|YP_063109.1| ATP-dependent Clp protease, ATP-bin... 78 7e-13 gi|68213889|ref|ZP_00565718.1| AAA ATPase, central region:Clp, N... 77 1e-12 gi|56543894|gb|AAV90048.1| ATP-dependent Clp protease [Zymomonas... 77 1e-12 gi|68528191|gb|EAN51157.1| AAA ATPase, central region:Clp, N ter... 76 1e-12 gi|16331048|ref|NP_441776.1| ClpB protein [Synechocystis sp. PCC... 76 1e-12 gi|58580960|ref|YP_199976.1| ATP-dependent Clp protease subunit ... 76 2e-12 gi|3360502|gb|AAC62621.1| heat shock protein [Plectonema boryanum] 76 2e-12 gi|53802726|ref|YP_115493.1| ATP-dependent Clp protease, ATP-bin... 76 2e-12 gi|75674787|ref|YP_317208.1| AAA ATPase [Nitrobacter winogradsky... 76 2e-12 gi|54294637|ref|YP_127052.1| endopeptidase Clp ATP-binding chain... 76 2e-12 gi|22295113|dbj|BAC08941.1| ClpB protein [Thermosynechococcus el... 76 2e-12 gi|75429872|ref|ZP_00732490.1| ATPases with chaperone activity, ... 76 2e-12 gi|23123825|ref|ZP_00105864.1| COG0542: ATPases with chaperone a... 76 3e-12 gi|52307890|gb|AAU38390.1| ClpA protein [Mannheimia succinicipro... 76 3e-12 gi|33639012|emb|CAE08018.1| endopeptidase Clp ATP-binding chain ... 75 3e-12 gi|52209532|emb|CAH35485.1| ClpB heat-shock protein [Burkholderi... 75 4e-12 gi|67985293|gb|EAM73247.1| AAA ATPase, central region:Clp, N ter... 75 5e-12 gi|33634638|emb|CAE20624.1| ATP-dependent Clp protease, Hsp 100,... 75 5e-12 gi|66870845|gb|EAL98209.1| AAA ATPase, central region:Clp, N ter... 74 6e-12 gi|17428350|emb|CAD15037.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 74 6e-12 gi|59711173|ref|YP_203949.1| ClpB protein [Vibrio fischeri ES114] 74 6e-12 gi|32423740|gb|AAP81264.1| ClpB [Pseudomonas aeruginosa] 74 8e-12 gi|69935649|ref|ZP_00630585.1| AAA ATPase, central region:Clp, N... 74 1e-11 gi|58698222|ref|ZP_00373142.1| ATP-dependent Clp protease, ATP-b... 74 1e-11 gi|28199560|ref|NP_779874.1| ATP-dependent Clp protease subunit ... 73 1e-11 gi|23128455|ref|ZP_00110302.1| COG0542: ATPases with chaperone a... 73 1e-11 gi|17982078|gb|AAL51377.1| ATP-DEPENDENT CLP PROTEASE, ATP-BINDI... 73 1e-11 gi|56750897|ref|YP_171598.1| ATP-dependent Clp protease ATP-bind... 73 1e-11 gi|48861360|ref|ZP_00315262.1| COG0542: ATPases with chaperone a... 73 1e-11 gi|66802530|ref|XP_635137.1| hypothetical protein DDB0183816 [Di... 73 2e-11 gi|56708764|ref|YP_170660.1| ClpB protein [Francisella tularensi... 73 2e-11 gi|56479246|ref|YP_160835.1| ClpB protein [Azoarcus sp. EbN1] 73 2e-11 gi|68537287|ref|ZP_00577067.1| AAA ATPase, central region:Clp, N... 73 2e-11 gi|29610907|dbj|BAC74952.1| putative ATP-dependent Clp protease ... 73 2e-11 gi|68189537|gb|EAN04203.1| AAA ATPase, central region:Clp, N ter... 73 2e-11 gi|38492939|pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb 73 2e-11 gi|69300937|ref|ZP_00622398.1| AAA ATPase, central region:Clp, N... 72 3e-11 gi|68180177|ref|ZP_00553160.1| AAA ATPase, central region:Clp, N... 72 3e-11 gi|74019149|ref|ZP_00689767.1| AAA ATPase, central region:Clp, N... 72 4e-11 gi|49612793|emb|CAG76243.1| ClpB protein (heat shock protein f84... 72 4e-11 gi|34497399|ref|NP_901614.1| ATP-dependent Clp protease subunit;... 72 4e-11 gi|13472967|ref|NP_104534.1| endopeptidase Clp ATP-binding chain... 71 4e-11 gi|48849033|ref|ZP_00303277.1| COG0542: ATPases with chaperone a... 71 5e-11 gi|56419334|ref|YP_146652.1| ATP-dependent Clp protease ATP-bind... 71 6e-11 gi|67923982|ref|ZP_00517435.1| AAA ATPase, central region:Clp, N... 71 6e-11 gi|71543204|ref|ZP_00664602.1| AAA ATPase, central region:Clp, N... 71 6e-11 gi|27376515|ref|NP_768044.1| ATP-dependent protease ATP-binding ... 71 6e-11 gi|71908340|ref|YP_285927.1| AAA ATPase, central region:Clp, N t... 71 7e-11 gi|33602268|ref|NP_889828.1| ATP-dependent protease, ATPase subu... 71 7e-11 gi|16125131|ref|NP_419695.1| ATP-dependent Clp protease, ATP-bin... 71 8e-11 gi|66043993|ref|YP_233834.1| AAA ATPase, central region:Clp, N t... 71 8e-11 gi|56679839|gb|AAV96505.1| ATP-dependent Clp protease, ATP-bindi... 71 9e-11 gi|48783814|ref|ZP_00280195.1| COG0542: ATPases with chaperone a... 71 9e-11 gi|75824073|ref|ZP_00753540.1| COG0542: ATPases with chaperone a... 71 9e-11 gi|71550106|ref|ZP_00670254.1| AAA ATPase, central region:Clp, N... 71 9e-11 gi|50084451|ref|YP_045961.1| ATP-dependent protease, Hsp 100, pa... 71 1e-10 gi|31872394|gb|AAP59445.1| ClpB-like protein [Meiothermus ruber] 71 1e-10 gi|17864015|gb|AAL47016.1| ClpB ATP protease [Paracoccidioides b... 70 1e-10 gi|39937493|ref|NP_949769.1| endopeptidase Clp: ATP-binding subu... 70 1e-10 gi|46580283|ref|YP_011091.1| ATP-dependent Clp protease, ATP-bin... 70 1e-10 gi|56460289|ref|YP_155570.1| ATP-binding subunit of Clp protease... 70 1e-10 gi|29653454|ref|NP_819146.1| clpB protein [Coxiella burnetii RSA... 70 1e-10 gi|61102045|ref|ZP_00377499.1| ATP-dependent Clp protease [Eryth... 70 1e-10 gi|71891969|ref|YP_277699.1| ATP-dependent protease [Candidatus ... 70 2e-10 gi|69954129|ref|ZP_00640937.1| AAA ATPase, central region:Clp, N... 70 2e-10 gi|58039904|ref|YP_191868.1| ATP-dependent Clp protease, ATP-bin... 70 2e-10 gi|37525237|ref|NP_928581.1| heat shock protein F84.1 [Photorhab... 69 2e-10 gi|67676700|ref|ZP_00473446.1| AAA ATPase, central region:Clp, N... 69 2e-10 gi|33945097|ref|XP_340696.1| heat shock protein 100 [Trypanosoma... 69 2e-10 gi|47573811|ref|ZP_00243848.1| COG0542: ATPases with chaperone a... 69 2e-10 gi|26987361|ref|NP_742786.1| ATP-dependent Clp protease, ATP-bin... 69 2e-10 gi|54310128|ref|YP_131148.1| putative clpB, ATPases with chapero... 69 2e-10 gi|22124822|ref|NP_668245.1| heat shock protein [Yersinia pestis... 69 3e-10 gi|68209271|ref|ZP_00561312.1| AAA ATPase, central region:Clp, N... 69 3e-10 gi|46202513|ref|ZP_00053096.2| COG0542: ATPases with chaperone a... 69 3e-10 gi|73667261|ref|YP_303277.1| AAA ATPase, central region:Clp, N t... 69 4e-10 gi|71482382|ref|ZP_00662075.1| AAA ATPase, central region:Clp, N... 69 4e-10 gi|16331154|ref|NP_441882.1| ClpB protein [Synechocystis sp. PCC... 68 4e-10 gi|22296180|dbj|BAC10004.1| endopeptidase Clp ATP-binding chain ... 68 4e-10 gi|70732609|ref|YP_262372.1| ClpB protein PA4542 [Pseudomonas fl... 68 4e-10 gi|58584441|ref|YP_198014.1| ATP-binding subunit of Clp protease... 68 5e-10 gi|33519653|ref|NP_878485.1| ATP-dependent protease, Hsp 100, pa... 68 5e-10 gi|73663109|ref|YP_301890.1| putative ATPase subunit of an ATP-d... 68 5e-10 gi|48763004|ref|ZP_00267561.1| COG0542: ATPases with chaperone a... 68 5e-10 gi|75853631|ref|ZP_00761428.1| COG0542: ATPases with chaperone a... 68 6e-10 gi|67921632|ref|ZP_00515150.1| AAA ATPase, central region:Clp, N... 68 6e-10 gi|8575704|gb|AAF78058.1| ClpB protease [secondary endosymbiont ... 68 6e-10 gi|27360063|gb|AAO09001.1| ClpB protein [Vibrio vulnificus CMCP6] 68 6e-10 gi|15159084|gb|AAK89256.1| AGR_L_1346p [Agrobacterium tumefacien... 68 7e-10 gi|71547803|ref|ZP_00668357.1| AAA ATPase, central region:Clp, N... 68 7e-10 gi|67907151|ref|ZP_00505556.1| AAA ATPase, central region:Clp, N... 68 7e-10 gi|399265|sp|P17422|CLPB_BACNO Chaperone clpB 68 8e-10 gi|21204024|dbj|BAB94722.1| clpB [Staphylococcus aureus subsp. a... 67 9e-10 gi|24375079|ref|NP_719122.1| clpB protein [Shewanella oneidensis... 67 9e-10 gi|6458777|gb|AAF10620.1| ATP-dependent Clp protease, ATP-bindin... 67 9e-10 gi|66782797|gb|EAL83760.1| AAA ATPase, central region:Clp, N ter... 67 9e-10 gi|18145090|dbj|BAB81134.1| clpB protein [Clostridium perfringen... 67 1e-09 gi|69945234|ref|ZP_00636365.1| AAA ATPase, central region:Clp, N... 67 1e-09 gi|70726976|ref|YP_253890.1| hypothetical protein SH1975 [Staphy... 67 1e-09 gi|42544975|gb|EAA67818.1| conserved hypothetical protein [Gibbe... 66 2e-09 gi|28210275|ref|NP_781219.1| clpB protein [Clostridium tetani E88] 66 2e-09 gi|32446255|emb|CAD76084.1| ClpB protein [Rhodopirellula baltica... 66 2e-09 gi|23474967|ref|ZP_00130258.1| COG0542: ATPases with chaperone a... 66 2e-09 gi|32422771|ref|XP_331829.1| hypothetical protein [Neurospora cr... 66 2e-09 gi|66854676|ref|ZP_00398756.1| AAA ATPase, central region:Clp, N... 66 2e-09 gi|72381856|ref|YP_291211.1| ATPase [Prochlorococcus marinus str... 66 3e-09 gi|33861137|ref|NP_892698.1| ATP-dependent Clp protease, Hsp 100... 66 3e-09 gi|50876799|emb|CAG36639.1| probable heat shock protein ClpB [De... 66 3e-09 gi|33240532|ref|NP_875474.1| ATPase with chaperone activity ATP-... 66 3e-09 gi|68171311|ref|ZP_00544710.1| AAA ATPase, central region:Clp, N... 66 3e-09 gi|74022612|ref|ZP_00693193.1| AAA ATPase, central region:Clp, N... 66 3e-09 gi|69927725|ref|ZP_00624886.1| AAA ATPase, central region:Clp, N... 66 3e-09 gi|57866505|ref|YP_188155.1| ATP-dependent Clp protease, ATP-bin... 65 3e-09 gi|56417033|ref|YP_154107.1| ATP-dependent clp protease ATP-bind... 65 4e-09 gi|11561806|gb|AAC83688.2| 101 kDa heat shock protein; HSP101 [N... 65 4e-09 gi|67919330|ref|ZP_00512911.1| AAA ATPase, central region:Clp, N... 65 4e-09 gi|66505208|ref|XP_392252.2| PREDICTED: similar to ENSANGP000000... 65 4e-09 gi|50916753|ref|XP_468773.1| putative heat shock protein [Oryza ... 65 4e-09 gi|39944910|ref|XP_361992.1| hypothetical protein MG04437.4 [Mag... 65 5e-09 gi|15023863|gb|AAK78935.1| ATPase with chaperone activity, two A... 65 5e-09 gi|9755800|emb|CAC01744.1| clpB heat shock protein-like [Arabido... 65 5e-09 gi|66805423|ref|XP_636444.1| hypothetical protein DDB0188234 [Di... 65 5e-09 gi|17131414|dbj|BAB74021.1| endopeptidase Clp ATP-binding chain ... 65 5e-09 gi|71837201|ref|ZP_00676967.1| AAA ATPase, central region:Clp, N... 65 5e-09 gi|70799667|gb|AAZ09583.1| Serine peptidase, putative [Leishmani... 64 5e-09 gi|68002317|ref|ZP_00534948.1| AAA ATPase, central region:Clp, N... 64 5e-09 gi|68551190|ref|ZP_00590613.1| AAA ATPase, central region:Clp, N... 64 6e-09 gi|39982528|gb|AAR33988.1| ClpB protein [Geobacter sulfurreducen... 64 6e-09 gi|7435720|pir||D71409 probable endopeptidase Clp ATP-binding ch... 64 6e-09 gi|7380324|emb|CAB84911.1| ClpB protein [Neisseria meningitidis ... 64 6e-09 gi|23128140|ref|ZP_00109994.1| COG0542: ATPases with chaperone a... 64 7e-09 gi|67517989|ref|XP_658767.1| hypothetical protein AN1163.2 [Aspe... 64 7e-09 gi|67935560|ref|ZP_00528580.1| AAA ATPase, central region:Clp, N... 64 7e-09 gi|58417961|emb|CAI27165.1| ClpB protein [Ehrlichia ruminantium ... 64 8e-09 gi|530207|gb|AAA66338.1| heat shock protein 64 8e-09 gi|11561808|gb|AAC83689.2| 101 kDa heat shock protein; HSP101 [T... 64 1e-08 gi|3560150|emb|CAA20737.1| SPBC4F6.17c [Schizosaccharomyces pombe] 64 1e-08 gi|51473305|ref|YP_067062.1| ATP-binding ClpB chaperone [Rickett... 64 1e-08 gi|68553506|ref|ZP_00592879.1| AAA ATPase, central region:Clp, N... 64 1e-08 AAA_CLPB_202-397_PF00004.17 64 1e-08 gi|71281252|ref|YP_270571.1| ATP-dependent chaperone protein Clp... 63 1e-08 gi|22957954|ref|ZP_00005638.1| COG0542: ATPases with chaperone a... 63 2e-08 gi|21675087|ref|NP_663152.1| ATP-dependent Clp protease, ATP-bin... 63 2e-08 gi|22535406|emb|CAC87117.1| heat shock protein 101 [Oryza sativa... 63 2e-08 gi|9651530|gb|AAF91178.1| ClpB [Phaseolus lunatus] 63 2e-08 gi|67940377|ref|ZP_00532807.1| AAA ATPase, central region:Clp, N... 63 2e-08 gi|67914654|gb|EAM63991.1| AAA ATPase, central region:Clp, N ter... 63 2e-08 gi|4481954|emb|CAB38512.1| SPBC16D10.08c [Schizosaccharomyces po... 63 2e-08 gi|66850118|gb|EAL90445.1| ATP-dependent Clp protease, putative ... 62 3e-08 gi|68054833|ref|ZP_00538983.1| AAA ATPase, central region:Clp, N... 62 3e-08 gi|15639065|ref|NP_218511.1| ATP-dependent Clp protease subunit ... 62 3e-08 gi|42527829|ref|NP_972927.1| ATP-dependent Clp protease, ATP-bin... 62 3e-08 PHD_TRX_1410-1469_PF00628.16 62 4e-08 gi|28378553|ref|NP_785445.1| ATP-dependent Clp protease, ATP-bin... 62 4e-08 gi|68246595|gb|EAN28691.1| AAA ATPase, central region:Clp, N ter... 62 4e-08 gi|71363823|ref|ZP_00654425.1| AAA ATPase, central region:Clp, N... 62 4e-08 gi|15075632|emb|CAC47187.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 62 4e-08 gi|67931988|ref|ZP_00525140.1| AAA ATPase, central region:Clp, N... 61 5e-08 gi|42453220|ref|ZP_00153127.1| COG0542: ATPases with chaperone a... 61 6e-08 gi|65303851|emb|CAI76228.1| ClpB protein, putative [Theileria an... 61 7e-08 gi|50309407|ref|XP_454711.1| unnamed protein product [Kluyveromy... 61 9e-08 gi|34540850|ref|NP_905329.1| clpB protein [Porphyromonas gingiva... 61 9e-08 gi|42524440|ref|NP_969820.1| ATPase with chaperone activity, two... 61 9e-08 gi|71677561|ref|ZP_00675297.1| AAA ATPase, central region:Clp, N... 61 1e-07 gi|66359990|ref|XP_627173.1| multidomain chromatinic protein [Cr... 60 1e-07 gi|6013196|gb|AAF01280.1| heat shock protein 101 [Triticum aesti... 60 1e-07 gi|6320464|ref|NP_010544.1| Oligomeric mitochondrial matrix chap... 60 1e-07 gi|68989120|dbj|BAE06227.1| heat shock protein [Lycopersicon esc... 60 1e-07 gi|52698325|ref|ZP_00339733.1| COG0542: ATPases with chaperone a... 60 1e-07 gi|29341916|gb|AAO79702.1| endopeptidase Clp ATP-binding chain B... 60 1e-07 gi|44983280|gb|AAS52462.1| AEL223Cp [Ashbya gossypii ATCC 10895] 60 1e-07 gi|53712497|ref|YP_098489.1| endopeptidase Clp ATP-binding chain... 59 2e-07 gi|29376856|ref|NP_816010.1| ATP-dependent Clp protease, ATP-bin... 59 2e-07 gi|68350763|gb|EAN31526.1| ClpB protein, putative [Theileria parva] 59 2e-07 gi|537446|gb|AAA67927.1| AtHSP101 59 3e-07 gi|48870729|ref|ZP_00323448.1| COG0542: ATPases with chaperone a... 59 3e-07 gi|68209799|ref|ZP_00561666.1| AAA ATPase, central region:Clp, N... 59 3e-07 gi|28493713|ref|NP_787874.1| ATP-dependent protase ATP-binding s... 59 3e-07 gi|50294636|ref|XP_449729.1| unnamed protein product [Candida gl... 59 3e-07 gi|67934490|ref|ZP_00527533.1| AAA ATPase, central region:Clp, N... 59 3e-07 gi|68195152|gb|EAN09610.1| AAA ATPase, central region:Clp, N ter... 59 3e-07 gi|34904048|ref|NP_913371.1| P0489G09.12 [Oryza sativa (japonica... 58 4e-07 gi|46908440|ref|YP_014829.1| clpB protein [Listeria monocytogene... 58 4e-07 gi|26006129|dbj|BAC41407.1| mKIAA0304 protein [Mus musculus] 58 5e-07 gi|62639360|ref|XP_341830.2| PREDICTED: similar to mixed lineage... 58 5e-07 gi|23480353|gb|EAA16934.1| ClpB protein [Plasmodium yoelii yoelii] 58 5e-07 gi|48855282|ref|ZP_00309441.1| COG0542: ATPases with chaperone a... 58 5e-07 gi|57898943|emb|CAI44947.1| putative HSP100 protein [Phycomyces ... 58 5e-07 gi|24214579|ref|NP_712060.1| ATPase with chaperone activity, two... 58 6e-07 gi|5123787|emb|CAB45385.1| trithorax homologue 2 [Homo sapiens] 58 7e-07 gi|3150046|gb|AAC16900.1| ClpB chaperone homolog [Lactococcus la... 58 7e-07 gi|68381002|ref|XP_695268.1| PREDICTED: similar to Myeloid/lymph... 58 8e-07 gi|61869994|ref|XP_582097.1| PREDICTED: similar to Myeloid/lymph... 57 1e-06 gi|7189542|gb|AAF38444.1| ATP-dependent Clp protease, subunit B ... 57 1e-06 gi|23612849|ref|NP_704388.1| hypothetical protein [Plasmodium fa... 57 1e-06 gi|68548612|ref|ZP_00588090.1| AAA ATPase, central region [Shewa... 57 1e-06 gi|72045520|ref|XP_797484.1| PREDICTED: similar to Ski oncogene ... 57 1e-06 gi|50555844|ref|XP_505330.1| hypothetical protein [Yarrowia lipo... 56 2e-06 gi|50365236|ref|YP_053661.1| ATPase subunit of ATP-dependant pro... 56 3e-06 gi|68479564|ref|XP_716146.1| hypothetical protein CaO19_13747 [C... 55 3e-06 gi|19713201|gb|AAL94040.1| ClpB protein [Fusobacterium nucleatum... 55 4e-06 gi|54035913|sp|Q9PKS5|CLPB_CHLMU Chaperone clpB 55 4e-06 gi|33944507|ref|XP_340401.1| mitochondrial heat shock protein 78... 55 5e-06 gi|47225576|emb|CAG12059.1| unnamed protein product [Tetraodon n... 54 7e-06 gi|68178655|ref|ZP_00551766.1| IMP dehydrogenase/GMP reductase:A... 54 7e-06 AAA_Q8X1A0_131-325_PF00004.17 54 8e-06 AAA_CLPB_202-401_PF00004.17 54 8e-06 gi|71661302|ref|XP_817674.1| ATP-dependent Clp protease subunit,... 54 8e-06 gi|29029074|gb|AAO64916.1| At5g53430 [Arabidopsis thaliana] 54 8e-06 gi|70800165|gb|AAZ10006.1| serine peptidase, putative [Leishmani... 54 1e-05 gi|20808693|ref|NP_623864.1| ATPases with chaperone activity, AT... 54 1e-05 gi|17979454|gb|AAL50064.1| At2g25140/F13D4.100 [Arabidopsis thal... 54 1e-05 gi|50288205|ref|XP_446531.1| unnamed protein product [Candida gl... 54 1e-05 AAA_Q5NE82_201-395_PF00004.17 53 2e-05 gi|53801462|gb|AAU93933.1| plastid clpB [Helicosporidium sp. ex ... 53 2e-05 AAA_Q5X4G2_201-395_PF00004.17 53 2e-05 gi|55631422|ref|XP_520008.1| PREDICTED: plectin 1 [Pan troglodytes] 53 2e-05 gi|47568371|ref|ZP_00239072.1| ATP-dependent Clp protease, ATP-b... 53 2e-05 gi|68562872|ref|ZP_00602103.1| UvrB/UvrC protein:AAA ATPase, cen... 53 2e-05 gi|57505852|ref|ZP_00371777.1| ATP-dependent Clp protease, ATP-b... 53 2e-05 gi|71401304|ref|XP_803323.1| ATP-dependent Clp protease subunit,... 52 2e-05 gi|62998570|gb|AAF01451.2| HSP100 [Pleurotus sajor-caju] 52 3e-05 AAA_CLPB_201-395_PF00004.17 52 3e-05 gi|29570852|gb|AAO73810.2| heat shock protein CLPA [Paracoccidio... 52 3e-05 gi|34904046|ref|NP_913370.1| P0489G09.11 [Oryza sativa (japonica... 52 3e-05 gi|15425870|gb|AAK97626.1| heat shock protein 78 [Candida albicans] 52 3e-05 AAA_CLPB_200-394_PF00004.17 52 4e-05 gi|57222826|gb|AAW40870.1| heat shock protein, putative [Cryptoc... 52 4e-05 AAA_Q5E7D5_201-395_PF00004.17 52 4e-05 AAA_CLPB_202-396_PF00004.17 51 5e-05 AAA_CLPB_201-395_PF00004.17 51 7e-05 AAA_Q5NYD0_201-395_PF00004.17 51 7e-05 AAA_CLPB1_203-399_PF00004.17 51 7e-05 gi|29840383|ref|NP_829489.1| ATP-dependent Clp protease, subunit... 51 7e-05 gi|23612374|ref|NP_703954.1| SET-domain protein, putative [Plasm... 51 7e-05 gi|34482740|emb|CAE09740.1| CLP PROTEASE ATP-BINDING SUBUNIT [Wo... 51 7e-05 gi|56784088|dbj|BAD81417.1| putative trithorax 3 [Oryza sativa (... 51 7e-05 AAA_CLPB_201-395_PF00004.17 51 8e-05 AAA_CLPB1_203-397_PF00004.17 51 8e-05 PHD_Q5TTZ4_684-743_PF00628.16 51 8e-05 gi|23481616|gb|EAA17840.1| Bromodomain, putative [Plasmodium yoe... 51 8e-05 gi|68175940|ref|ZP_00549169.1| AAA ATPase, central region:Clp, N... 51 9e-05 AAA_CLPB1_203-398_PF00004.17 51 9e-05 AAA_CLPB2_203-397_PF00004.17 51 9e-05 gi|49655876|emb|CAG88481.1| unnamed protein product [Debaryomyce... 50 1e-04 gi|73974720|ref|XP_857253.1| PREDICTED: similar to plectin 1 iso... 50 1e-04 AAA_CLPB_201-395_PF00004.17 50 1e-04 AAA_CLPB_193-386_PF00004.17 50 1e-04 AAA_Q5H380_238-432_PF00004.17 50 1e-04 AAA_CLPB_201-395_PF00004.17 50 2e-04 gi|61815938|ref|XP_599963.1| PREDICTED: similar to CDC42-binding... 49 2e-04 gi|68070837|ref|XP_677332.1| SET-domain protein, putative [Plasm... 49 2e-04 AAA_CLPB1_202-396_PF00004.17 49 2e-04 AAA_CLPB2_204-398_PF00004.17 49 2e-04 gi|42565848|ref|NP_190778.2| PHD finger family protein [Arabidop... 49 2e-04 PHD_Q8GZ42_415-469_PF00628.16 49 2e-04 AAA_CLPB2_203-397_PF00004.17 49 3e-04 AAA_CLPB_204-398_PF00004.17 49 3e-04 AAA_CLPB_201-395_PF00004.17 49 3e-04 gi|6967978|emb|CAB75146.1| ATP-dependent CLP protease ATP-bindin... 49 3e-04 gi|62665845|ref|XP_228081.3| PREDICTED: similar to Disco-interac... 49 3e-04 gi|42561142|ref|NP_975593.1| ATP dependant protease ClpB [Mycopl... 49 3e-04 AAA_CLPB_201-395_PF00004.17 49 3e-04 gi|50758242|ref|XP_415827.1| PREDICTED: similar to myosin 18A is... 49 3e-04 gi|7576225|emb|CAB87915.1| AtClpC [Arabidopsis thaliana] 49 3e-04 AAA_CLPB_204-397_PF00004.17 49 3e-04 gi|72139351|ref|XP_782203.1| PREDICTED: similar to myeloid/lymph... 49 3e-04 gi|6754392|ref|NP_034717.1| intersectin 1 (SH3 domain protein 1A... 49 3e-04 PHD_Q5CVU6_611-667_PF00628.16 49 3e-04 gi|51744715|ref|XP_488011.1| PREDICTED: RIKEN cDNA 4932431P20 [M... 49 3e-04 gi|14133241|dbj|BAA86438.2| KIAA1124 protein [Homo sapiens] 49 3e-04 gi|66855575|ref|ZP_00399649.1| AAA ATPase, central region:Clp, N... 49 4e-04 AAA_Q6AC89_75-269_PF00004.17 49 4e-04 gi|4838526|gb|AAD31026.1| EH-domain/SH3-domain containing protei... 49 4e-04 gi|62087516|dbj|BAD92205.1| CDC42 binding protein kinase alpha v... 48 4e-04 AAA_Q5FQY4_202-396_PF00004.17 48 4e-04 gi|399212|sp|P31541|CLAA_LYCES ATP-dependent Clp protease ATP-bi... 48 5e-04 gi|73955094|ref|XP_546507.2| PREDICTED: similar to golgi autoant... 48 5e-04 gi|67517511|ref|XP_658590.1| hypothetical protein AN0986.2 [Aspe... 48 5e-04 gi|66850531|gb|EAL90858.1| ATP-dependent Clp protease, putative ... 48 5e-04 gi|68512803|gb|EAN36605.1| UvrB/UvrC protein:AAA ATPase, central... 48 5e-04 AAA_CLPB_193-386_PF00004.17 48 5e-04 gi|15827032|ref|NP_301295.1| putative ATP-dependent Clp protease... 48 7e-04 gi|33641129|emb|CAE22259.1| putative ATP-dependent Clp protease,... 48 7e-04 gi|3309543|gb|AAC41377.1| MLL [Takifugu rubripes] 48 7e-04 gi|47221226|emb|CAG13162.1| unnamed protein product [Tetraodon n... 47 7e-04 gi|40849896|gb|AAR95660.1| plectin 6 [Rattus norvegicus] 47 7e-04 AAA_Q68XR2_202-396_PF00004.17 47 7e-04 AAA_CLPB_205-399_PF00004.17 47 7e-04 AAA_CLPB2_206-400_PF00004.17 47 7e-04 AAA_Q873Z4_139-332_PF00004.17 47 8e-04 gi|47219426|emb|CAG10790.1| unnamed protein product [Tetraodon n... 47 8e-04 AAA_Q5QTU7_201-395_PF00004.17 47 8e-04 gi|67465519|ref|XP_648944.1| AAA family ATPase, putative [Entamo... 47 8e-04 gi|16758474|ref|NP_446109.1| CDC42-binding protein kinase alpha ... 47 8e-04 AAA_Q5L1U6_202-396_PF00004.17 47 8e-04 gi|44985843|gb|AAS54454.1| AGL036Cp [Ashbya gossypii ATCC 10895] 47 9e-04 gi|57505126|ref|ZP_00371071.1| ATP-dependent Clp protease, ATP-b... 47 0.001 gi|39977113|ref|XP_369944.1| hypothetical protein MG06459.4 [Mag... 47 0.001 gi|49655166|emb|CAG87721.1| unnamed protein product [Debaryomyce... 47 0.001 AAA_CLPB_206-400_PF00004.17 47 0.001 gi|67463114|ref|XP_648214.1| HSP101-related protein [Entamoeba h... 47 0.001 gi|50732237|ref|XP_418542.1| PREDICTED: similar to Myeloid/lymph... 47 0.001 gi|55625836|ref|XP_518227.1| PREDICTED: desmoplakin [Pan troglod... 47 0.001 gi|34499124|ref|NP_903339.1| ATP-dependent Clp protease, ATP-bin... 47 0.001 gi|67155734|ref|ZP_00417361.1| AAA ATPase, central region:Clp, N... 47 0.001 AAA_CLPB_201-395_PF00004.17 47 0.001 gi|1296662|emb|CAA91196.1| plectin [Homo sapiens] 47 0.001 gi|68357652|ref|XP_693359.1| PREDICTED: similar to fetal Alzheim... 47 0.001 gi|68379980|ref|XP_685116.1| PREDICTED: similar to MLL [Danio re... 47 0.001 AAA_CLPB_202-396_PF00004.17 47 0.001 gi|50233868|ref|NP_055771.3| hypothetical protein LOC22897 [Homo... 47 0.001 AAA_CLPB_201-395_PF00004.17 47 0.001 gi|73960799|ref|XP_863624.1| PREDICTED: similar to CDC42-binding... 47 0.001 gi|32261656|gb|AAP76706.1| ATP-dependent CLP protease ClpA [Heli... 47 0.001 gi|21203645|dbj|BAB94345.1| endopeptidase [Staphylococcus aureus... 46 0.002 gi|6850865|emb|CAB71104.1| putative protein [Arabidopsis thaliana] 46 0.002 gi|74001175|ref|XP_857677.1| PREDICTED: similar to Intersectin 1... 46 0.002 gi|38566922|emb|CAE76225.1| related to putative cytoplasmic stru... 46 0.002 gi|42567196|ref|NP_194520.3| PHD finger protein-related / SET do... 46 0.002 AAA_Q96TW3_202-394_PF00004.17 46 0.002 gi|71751458|ref|XP_824811.1| kinesin [Trypanosoma brucei] 46 0.002 gi|50748728|ref|XP_421380.1| PREDICTED: similar to KIAA1124 prot... 46 0.002 gi|32419136|ref|XP_330046.1| hypothetical protein [Neurospora cr... 46 0.002 AAA_CLPB_202-396_PF00004.17 46 0.002 gi|66501221|ref|XP_623473.1| PREDICTED: similar to CG10897-PA, i... 46 0.002 gi|73960805|ref|XP_537229.2| PREDICTED: similar to CDC42-binding... 46 0.002 gi|50311735|ref|XP_455896.1| unnamed protein product [Kluyveromy... 46 0.002 gi|55655772|ref|XP_531442.1| PREDICTED: similar to intersectin 1... 46 0.002 gi|55656928|ref|XP_514872.1| PREDICTED: similar to intersectin 1... 46 0.002 gi|73960797|ref|XP_863599.1| PREDICTED: similar to CDC42-binding... 46 0.002 gi|6648214|gb|AAF21212.1| unknown protein [Arabidopsis thaliana] 46 0.002 gi|13345187|gb|AAK19244.1| reticulocyte binding protein 2 homolo... 46 0.002 gi|54308345|ref|YP_129365.1| Putative ATP-dependent Clp protease... 46 0.003 gi|62658902|ref|XP_213777.3| PREDICTED: huntingtin interacting p... 46 0.003 gi|12644130|sp|P15924|DESP_HUMAN Desmoplakin (DP) (250/210 kDa p... 46 0.003 gi|57241181|ref|ZP_00369128.1| clpB protein VC0711 [Campylobacte... 46 0.003 gi|61845624|ref|XP_582529.1| PREDICTED: similar to SKI, partial ... 46 0.003 gi|71412310|ref|XP_808346.1| hypothetical protein, conserved [Tr... 46 0.003 gi|476894|pir||A46598 transforming protein c-ski - chicken (frag... 45 0.003 gi|3004551|gb|AAC09024.1| hypothetical protein [Arabidopsis thal... 45 0.004 gi|73979827|ref|XP_532890.2| PREDICTED: similar to intersectin 2... 45 0.004 gi|67517159|ref|XP_658462.1| hypothetical protein AN0858.2 [Aspe... 45 0.004 gi|44889002|sp|P31540|HSP98_NEUCR Heat shock protein HSP98 45 0.005 gi|13814451|gb|AAK41495.1| Microtubule binding protein, putative... 45 0.005 gi|52001792|gb|AAU21734.1| class III stress response-related ATP... 45 0.005 gi|3859855|gb|AAC78611.1| intersectin long form [Homo sapiens] 44 0.006 gi|73964054|ref|XP_547990.2| PREDICTED: similar to CDC42-binding... 44 0.006 gi|71024695|ref|XP_762577.1| hypothetical protein UM06430.1 [Ust... 44 0.006 gi|57228420|gb|AAW44877.1| chaperone, putative [Cryptococcus neo... 44 0.006 gi|13384201|gb|AAK21311.1| myosin subfamily XI heavy chain [Petr... 44 0.006 gi|73964056|ref|XP_868604.1| PREDICTED: similar to Cdc42 binding... 44 0.007 gi|38636442|emb|CAE81978.1| related to vesicular transport prote... 44 0.007 gi|37675370|ref|NP_032813.2| pericentrin 2 [Mus musculus] 44 0.007 gi|7294443|gb|AAF49788.1| CG9206-PA [Drosophila melanogaster] 44 0.007 gi|3327124|dbj|BAA31630.1| KIAA0655 protein [Homo sapiens] 44 0.007 gi|55742224|ref|NP_001006915.1| myosin, heavy polypeptide 2, ske... 44 0.007 gi|27529913|dbj|BAA96036.2| KIAA1512 protein [Homo sapiens] 44 0.008 gi|62646127|ref|XP_230774.3| PREDICTED: similar to myosin, heavy... 44 0.008 gi|63622214|ref|XP_618893.1| PREDICTED: similar to myosin, heavy... 44 0.008 gi|62414084|ref|NP_001014816.1| kinesin family member 7 [Danio r... 44 0.008 gi|57228143|gb|AAW44600.1| transcriptional activator, putative [... 44 0.008 gi|50757613|ref|XP_415578.1| PREDICTED: similar to myosin heavy ... 44 0.009 gi|61835730|ref|XP_590008.1| PREDICTED: similar to guanylate bin... 44 0.009 gi|42761572|gb|AAS45390.1| similar to Babesia bigemina. 200 kDa ... 44 0.009 gi|34532311|dbj|BAC86384.1| unnamed protein product [Homo sapiens] 44 0.009 gi|73964058|ref|XP_868606.1| PREDICTED: similar to Cdc42 binding... 44 0.010 gi|72010599|ref|XP_784200.1| PREDICTED: similar to nuclear oncop... 44 0.011 gi|56550527|dbj|BAD77934.1| AousoA [Aspergillus oryzae] 44 0.012 gi|50753023|ref|XP_413836.1| PREDICTED: similar to homer-2b [Gal... 44 0.012 SMC_N_Q67MD3_4-1192_PF02463.7 44 0.013 gi|51893313|ref|YP_076004.1| DNA repair exonuclease [Symbiobacte... 44 0.013 gi|32408715|ref|XP_324838.1| hypothetical protein [Neurospora cr... 43 0.013 AAA_Q5YNI7_201-396_PF00004.17 43 0.014 gi|50256955|gb|EAL19673.1| hypothetical protein CNBG3010 [Crypto... 43 0.014 PHD_Q6PHU4_634-693_PF00628.16 43 0.015 gi|73955070|ref|XP_536554.2| PREDICTED: similar to myeloid/lymph... 43 0.015 gi|1403575|emb|CAA59349.1| multiple ligand-binding protein 1 [St... 43 0.015 gi|42548995|gb|EAA71838.1| hypothetical protein FG02793.1 [Gibbe... 43 0.016 gi|62649539|ref|XP_342897.2| PREDICTED: similar to hypothetical ... 43 0.017 gi|55643363|ref|XP_510794.1| PREDICTED: periplakin [Pan troglody... 43 0.017 gi|13272546|gb|AAK17202.1| major plasmodial myosin heavy chain [... 43 0.018 PHD_Q6LEX8_1763-1819_PF00628.16 43 0.019 gi|62653950|ref|XP_236194.3| PREDICTED: similar to All-1 protein... 43 0.020 gi|3986196|dbj|BAA34955.1| myosin heavy chain [Dugesia japonica] 43 0.020 gi|22770984|gb|AAN06818.1| ezrin [Oryctolagus cuniculus] 43 0.020 gi|74016976|ref|ZP_00687601.1| Methyltransferase FkbM [Burkholde... 42 0.022 gi|50554303|ref|XP_504560.1| hypothetical protein [Yarrowia lipo... 42 0.024 gi|50554163|ref|XP_504490.1| hypothetical protein [Yarrowia lipo... 42 0.025 gi|21887052|gb|AAL56068.2| PP1221 [Homo sapiens] 42 0.026 gi|50737091|ref|XP_419151.1| PREDICTED: similar to corneal epith... 42 0.026 gi|34785071|gb|AAH56775.1| Hypothetical protein MGC63512 [Danio ... 42 0.027 gi|61809353|ref|XP_592197.1| PREDICTED: similar to GD:DSP [Bos t... 42 0.028 gi|73959238|ref|XP_547141.2| PREDICTED: similar to periplakin [C... 42 0.028 gi|30841496|gb|AAP34402.1| CDC42-binding protein kinase beta [Mu... 42 0.029 gi|55637049|ref|XP_508792.1| PREDICTED: similar to ALL-1 protein... 42 0.029 gi|45383005|ref|NP_989918.1| myosin, heavy polypeptide 7B, cardi... 42 0.030 gi|58037461|ref|NP_084017.1| hypothetical protein LOC76787 [Mus ... 42 0.030 gi|54644888|gb|EAL33628.1| GA18599-PA [Drosophila pseudoobscura] 42 0.031 AAA_CLPB_201-396_PF00004.17 42 0.031 gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin h... 42 0.035 gi|68353052|gb|EAN33812.1| hypothetical protein, conserved [Thei... 42 0.037 gi|71415601|ref|XP_809862.1| hypothetical protein Tc00.104705350... 42 0.038 gi|47217446|emb|CAG10215.1| unnamed protein product [Tetraodon n... 42 0.041 gi|55596776|ref|XP_515556.1| PREDICTED: similar to dynactin 1 is... 42 0.041 gi|27803037|emb|CAD60740.1| unnamed protein product [Podospora a... 42 0.041 gi|37360977|ref|NP_808482.2| CAZ-associated structural protein [... 42 0.042 gi|2351219|dbj|BAA22067.1| myosin heavy chain [Cyprinus carpio] 42 0.047 gi|60360056|dbj|BAD90247.1| mKIAA1052 protein [Mus musculus] 41 0.053 gi|16945384|emb|CAB97305.2| related to transcription factor TMF ... 41 0.058 PHD_Q7RRN5_1438-1494_PF00628.16 41 0.065 gi|33468583|emb|CAE30366.1| novel protein similar to human non-m... 41 0.067 gi|24660442|gb|AAH39612.1| MYO18A protein [Homo sapiens] 41 0.068 gi|66857698|ref|ZP_00401742.1| SMC protein, N-terminal:Structura... 41 0.072 gi|56205924|emb|CAI24426.1| myosin XVIIIa [Mus musculus] 41 0.076 gi|71754745|ref|XP_828287.1| hypothetical protein Tb11.46.0004 [... 41 0.080 gi|19075291|ref|NP_587791.1| hypothetical protein SPCC594.05c [S... 41 0.080 gi|68359767|ref|XP_690700.1| PREDICTED: similar to SPECC1 protei... 41 0.082 gi|72109196|ref|XP_787266.1| PREDICTED: similar to Inner centrom... 41 0.082 gi|37362206|gb|AAQ91231.1| differentially expressed in FDCP 6-li... 41 0.087 gi|50751217|ref|XP_422300.1| PREDICTED: similar to Tpr [Gallus g... 41 0.093 gi|68359769|ref|XP_690827.1| PREDICTED: similar to NSP5beta3beta... 41 0.097 SMC_N_Q802S1_2-1167_PF02463.7 41 0.097 gi|74095929|ref|NP_001027796.1| SMC2 protein [Takifugu rubripes] 41 0.097 gi|62656260|ref|XP_340821.2| PREDICTED: myosin heavy polypeptide... 41 0.098 gi|68375370|ref|XP_686748.1| PREDICTED: similar to CDC42-binding... 41 0.099 gi|55642243|ref|XP_510462.1| PREDICTED: similar to sarcomeric tr... 41 0.099 gi|61819731|ref|XP_599974.1| PREDICTED: similar to Intersectin 2... 41 0.10 gi|72007330|ref|XP_782567.1| PREDICTED: similar to Trichohyalin ... 41 0.10 gi|47208995|emb|CAF91401.1| unnamed protein product [Tetraodon n... 41 0.10 gi|68125760|emb|CAJ03563.1| hypothetical protein, conserved [Lei... 41 0.10 gi|3252880|gb|AAC24207.1| myosin heavy chain isoform A [Loligo p... 41 0.10 gi|2160396|dbj|BAA03407.1| MLL [Homo sapiens] 41 0.11 gi|38488753|ref|NP_942118.1| myosin, heavy polypeptide 6, cardia... 41 0.11 gi|50760637|ref|XP_418091.1| PREDICTED: similar to Glial fibrill... 40 0.12 gi|422615|pir||A47297 myosin heavy chain form B, nonmuscle - Afr... 40 0.12 gi|41054798|ref|NP_957334.1| hypothetical protein LOC394015 [Dan... 40 0.12 gi|50838836|ref|NP_001001302.1| myosin, heavy polypeptide 7, car... 40 0.12 gi|33639477|emb|CAE08861.1| putative ATP-dependent Clp protease,... 40 0.12 gi|420071|pir||A43336 microtubule-vesicle linker CLIP-170 - human 40 0.13 gi|2827709|emb|CAA16682.1| predicted protein [Arabidopsis thaliana] 40 0.13 gi|71018309|ref|XP_759385.1| hypothetical protein UM03238.1 [Ust... 40 0.13 gi|47230348|emb|CAF99541.1| unnamed protein product [Tetraodon n... 40 0.13 gi|47205359|emb|CAF96150.1| unnamed protein product [Tetraodon n... 40 0.14 gi|4506751|ref|NP_002947.1| restin isoform a [Homo sapiens] 40 0.14 gi|56207208|emb|CAI25143.1| myosin, heavy polypeptide 13, skelet... 40 0.15 gi|13431711|sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skelet... 40 0.15 gi|72143373|ref|XP_798142.1| PREDICTED: similar to early endosom... 40 0.16 gi|65305200|emb|CAI73525.1| hypothetical protein [Theileria annu... 40 0.17 gi|73980499|ref|XP_866328.1| PREDICTED: similar to dynactin 1 is... 40 0.18 gi|33413782|gb|AAN39444.1| normocyte binding protein 2a [Plasmod... 40 0.18 gi|50924660|ref|XP_472685.1| OSJNBa0086B14.27 [Oryza sativa (jap... 40 0.18 gi|50907355|ref|XP_465166.1| putative guanylate binding protein ... 40 0.19 gi|1490271|emb|CAA93625.1| ALL-1 protein [Homo sapiens] 39 0.19 gi|54641700|gb|EAL30450.1| GA21664-PA [Drosophila pseudoobscura] 39 0.19 gi|72016151|ref|XP_781919.1| PREDICTED: similar to CG15792-PA, i... 39 0.19 gi|20094208|ref|NP_614055.1| hypothetical protein MK0771 [Methan... 39 0.20 gi|55639133|ref|XP_522547.1| PREDICTED: restin [Pan troglodytes] 39 0.21 gi|14009350|gb|AAK50339.1| emm type protein precursor [Streptoco... 39 0.21 gi|73980505|ref|XP_866367.1| PREDICTED: similar to dynactin 1 is... 39 0.21 gi|55741486|ref|NP_999020.1| beta-myosin heavy chain [Sus scrofa] 39 0.22 gi|74001604|ref|XP_548735.2| PREDICTED: similar to pericentrin 2... 39 0.22 gi|64085252|ref|NP_689659.2| chromosome 14 open reading frame 14... 39 0.22 gi|45382045|ref|NP_990066.1| myosin VI [Gallus gallus] 39 0.22 gi|73980491|ref|XP_866265.1| PREDICTED: similar to dynactin 1 is... 39 0.22 gi|50950115|dbj|BAD34967.1| junction-associated coiled-coil prot... 39 0.23 gi|47210920|emb|CAG06219.1| unnamed protein product [Tetraodon n... 39 0.23 gi|48096868|ref|XP_394789.1| PREDICTED: similar to CG9170-PA, is... 39 0.23 gi|68355944|ref|XP_707480.1| PREDICTED: ventricular myosin heavy... 39 0.23 gi|71415731|ref|XP_809922.1| hypothetical protein, conserved [Tr... 39 0.23 gi|42554130|gb|EAA76973.1| hypothetical protein FG06926.1 [Gibbe... 39 0.23 gi|74002605|ref|XP_848707.1| PREDICTED: similar to myosin, heavy... 39 0.24 gi|73983464|ref|XP_853705.1| PREDICTED: similar to Inner centrom... 39 0.24 gi|50949611|emb|CAH10575.1| hypothetical protein [Homo sapiens] 39 0.25 gi|50757621|ref|XP_415581.1| PREDICTED: similar to fast myosin h... 39 0.26 gi|9971579|dbj|BAB12571.1| myosin heavy chain [Pennahia argentata] 39 0.27 gi|45385726|gb|AAS59740.1| autotransporter adhesin precursor [Ac... 39 0.27 gi|39591036|emb|CAE58816.1| Hypothetical protein CBG02025 [Caeno... 39 0.28 gi|56205922|emb|CAI24424.1| myosin XVIIIa [Mus musculus] 39 0.29 gi|68355946|ref|XP_707481.1| PREDICTED: ventricular myosin heavy... 39 0.29 gi|62641805|ref|XP_215206.3| PREDICTED: similar to FLJ00354 prot... 39 0.30 gi|70800045|gb|AAZ09886.1| hypothetical protein, conserved [Leis... 39 0.33 gi|437191|gb|AAA50854.1| M5.8193 protein 39 0.34 gi|68355950|ref|XP_707483.1| PREDICTED: ventricular myosin heavy... 39 0.34 gi|27529702|dbj|BAA13206.2| KIAA0216 [Homo sapiens] 39 0.34 gi|71533417|gb|AAZ32811.1| Hypothetical protein F23F12.8 [Caenor... 39 0.34 gi|68364800|ref|XP_692069.1| PREDICTED: similar to desmoplakin i... 39 0.35 gi|40882180|emb|CAF06006.1| hypothetical protein [Neurospora cra... 39 0.35 gi|7209643|dbj|BAA92289.1| myosin heavy chain [Seriola dumerili] 39 0.35 gi|74186149|dbj|BAE34241.1| unnamed protein product [Mus musculus] 39 0.35 gi|39971187|ref|XP_366984.1| hypothetical protein MG03060.4 [Mag... 39 0.36 gi|21674524|ref|NP_662589.1| Smc family protein [Chlorobium tepi... 39 0.36 SMC_N_Q8KBS6_2-1167_PF02463.7 39 0.37 gi|127774|sp|P08799|MYS2_DICDI Myosin II heavy chain, non muscle 39 0.37 gi|55634519|ref|XP_508031.1| PREDICTED: chondroitin sulfate prot... 39 0.38 gi|28972187|dbj|BAC65547.1| mKIAA0378 protein [Mus musculus] 39 0.41 gi|73998561|ref|XP_851818.1| PREDICTED: similar to Structural ma... 38 0.42 gi|51764831|ref|XP_110671.3| PREDICTED: myeloid/lymphoid or mixe... 38 0.42 gi|72385522|ref|XP_846428.1| hypothetical protein Tb927.1.3940 [... 38 0.44 SMC_N_Q803N2_2-1196_PF02463.7 38 0.46 gi|63476017|ref|XP_355224.3| PREDICTED: similar to Crocc protein... 38 0.47 gi|3168846|gb|AAC17738.1| 195 kDa cornified envelope precursor [... 38 0.48 gi|38177589|gb|AAF00096.2| ventricular myosin heavy chain [Danio... 38 0.48 gi|47208510|emb|CAF96455.1| unnamed protein product [Tetraodon n... 38 0.49 gi|47208509|emb|CAF96454.1| unnamed protein product [Tetraodon n... 38 0.50 gi|30178670|gb|EAA45415.1| ENSANGP00000009410 [Anopheles gambiae... 38 0.53 gi|38347763|dbj|BAD01607.1| myosin heavy chain [Lethenteron japo... 38 0.54 SMC_N_Q6P5E5_2-1196_PF02463.7 38 0.56 SMC_N_SMC3_2-1198_PF02463.7 38 0.56 gi|71651266|ref|XP_814314.1| hypothetical protein, conserved [Tr... 38 0.56 SMC_N_SMC3_2-1191_PF02463.7 38 0.58 gi|71748844|ref|XP_823477.1| hypothetical protein Tb10.389.0860 ... 38 0.59 >gi|8777406|dbj|BAA96996.1| unnamed protein product [Arabidopsis thaliana] Length = 574 Score = 686 bits (1771), Expect = 0.0 Identities = 342/486 (70%), Positives = 391/486 (80%), Gaps = 10/486 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DSMEQ NV HVSNAD+VS+RDIARERV++VAERMHRLPDEFL+ELK GL++ILEGN A Sbjct: 73 DSMEQTVNVMHHVSNADKVSVRDIARERVELVAERMHRLPDEFLDELKNGLKSILEGNVA 132 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQSR+DL+S TLV+AHRVQLEILVAINTGIQAFLHPNISLSQ SLIEI Sbjct: 133 QSVDEFMFLQKVVQSRTDLSSVTLVRAHRVQLEILVAINTGIQAFLHPNISLSQPSLIEI 192 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPADDC CDIC+N+KGFCNLCMC IC+KFDF+ NTCRWIGCD+CSH Sbjct: 193 FVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTCRWIGCDLCSH 252 Query: 181 WCHTDCAIREGLIKMGHSAKGA-SGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFE 239 W HTDCAIR+G I G SAK SG E++F C ACN TSEL G+VKDVFQHCAPNWD E Sbjct: 253 WTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRTSELLGWVKDVFQHCAPNWDRE 312 Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 +L+KELDFV +IFRGSED RG+KLFWK +ELI+K+K L + A ILMFFQE +SDS Sbjct: 313 SLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIKGGLAEA-TAAKLILMFFQEIESDS 371 Query: 300 -PSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED 358 S ENGEGG L+APQDACN IAEVVQ+T RKME+VAEEKMRMFKKAR L+ CDRELED Sbjct: 372 AKSFENGEGGRLMAPQDACNRIAEVVQETLRKMEIVAEEKMRMFKKARMALETCDRELED 431 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 KA V++LK ERQKKK QI+ELE IVRLKQAEADMFQLKA+EA+REA+ Sbjct: 432 KAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMDK 491 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC-------DFDPMKMRMESEIRGLL 471 Y S YLK RLSEAE +QYLFE++K QENS+ DP ++ M S+IR LL Sbjct: 492 SEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRVASQSSGGGGDPSQVMMYSKIRDLL 551 Query: 472 KGMEMT 477 +G ++ Sbjct: 552 QGYNLS 557 >gi|6466960|gb|AAF13095.1| unknown protein [Arabidopsis thaliana] Length = 566 Score = 672 bits (1735), Expect = 0.0 Identities = 332/478 (69%), Positives = 386/478 (80%), Gaps = 4/478 (0%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +Q +V RHVS AD+VSLRDIARER+D+VAERMHRLP+E+LEELK GL+AILEGNGA Sbjct: 74 DSHDQ--HVIRHVSIADKVSLRDIARERLDIVAERMHRLPEEYLEELKNGLKAILEGNGA 131 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQ+RSDLTS+TLV+AHRVQLE+LV INTGIQAFLHPNI+LSQSSLIEI Sbjct: 132 QPIDEFMFLQKFVQTRSDLTSKTLVRAHRVQLEVLVVINTGIQAFLHPNINLSQSSLIEI 191 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPAD C C+IC+N+KGFCNLCMCVIC+KFDFA NTCRWIGCDVCSH Sbjct: 192 FVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTCRWIGCDVCSH 251 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 W HTDCAIR+G I MG S K SGM EMLF C ACNHTSEL G+VKDVFQHCAPNWD E+ Sbjct: 252 WTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRES 311 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L+KELDFV +IFRGSED RG+KLFWK +EL+EK+K L + A ILMFFQE + DSP Sbjct: 312 LMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGGLAEA-TAAKLILMFFQEIELDSP 370 Query: 301 -SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK 359 SLE+GEGG IAPQDACN IAEVV++T RKME+V EEK RM+KKAR L+ C+RE+E+K Sbjct: 371 KSLESGEGGGTIAPQDACNRIAEVVKETLRKMEIVGEEKTRMYKKARMGLEECEREVEEK 430 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A V +L+MERQKKK QIEE+E IVRLKQAEA+MFQLKA+EA+ EAE Sbjct: 431 AKQVAELQMERQKKKQQIEEVERIVRLKQAEAEMFQLKANEAKVEAERLERIVKAKKEKT 490 Query: 420 XXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 Y S YLKLRLSEAE ++YLFE++K QE+ + + M S+IR +L G + Sbjct: 491 EEEYASNYLKLRLSEAEAEKEYLFEKIKEQESGGNGGEASQAVMYSKIREMLHGYNAS 548 >DUF1423_Q9LUB7_73-557_PF07227.1 Length = 485 Score = 672 bits (1734), Expect = 0.0 Identities = 342/486 (70%), Positives = 391/486 (80%), Gaps = 10/486 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DSMEQ NV HVSNAD+VS+RDIARERV++VAERMHRLPDEFL+ELK GL++ILEGN A Sbjct: 1 DSMEQTVNVMHHVSNADKVSVRDIARERVELVAERMHRLPDEFLDELKNGLKSILEGNVA 60 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQSR+DL+S TLV+AHRVQLEILVAINTGIQAFLHPNISLSQ SLIEI Sbjct: 61 QSVDEFMFLQKVVQSRTDLSSVTLVRAHRVQLEILVAINTGIQAFLHPNISLSQPSLIEI 120 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPADDC CDIC+N+KGFCNLCMC IC+KFDF+ NTCRWIGCD+CSH Sbjct: 121 FVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTCRWIGCDLCSH 180 Query: 181 WCHTDCAIREGLIKMGHSAKGA-SGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFE 239 W HTDCAIR+G I G SAK SG E++F C ACN TSEL G+VKDVFQHCAPNWD E Sbjct: 181 WTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRTSELLGWVKDVFQHCAPNWDRE 240 Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 +L+KELDFV +IFRGSED RG+KLFWK +ELI+K+K L + A ILMFFQE +SDS Sbjct: 241 SLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIKGGLAEA-TAAKLILMFFQEIESDS 299 Query: 300 -PSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED 358 S ENGEGG L+APQDACN IAEVVQ+T RKME+VAEEKMRMFKKAR L+ CDRELED Sbjct: 300 AKSFENGEGGRLMAPQDACNRIAEVVQETLRKMEIVAEEKMRMFKKARMALETCDRELED 359 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 KA V++LK ERQKKK QI+ELE IVRLKQAEADMFQLKA+EA+REA+ Sbjct: 360 KAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMDK 419 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC-------DFDPMKMRMESEIRGLL 471 Y S YLK RLSEAE +QYLFE++K QENS+ DP ++ M S+IR LL Sbjct: 420 SEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRVASQSSGGGGDPSQVMMYSKIRDLL 479 Query: 472 KGMEMT 477 +G ++ Sbjct: 480 QGYNLS 485 >DUF1423_Q9S736_74-548_PF07227.1 Length = 475 Score = 656 bits (1693), Expect = 0.0 Identities = 332/478 (69%), Positives = 386/478 (80%), Gaps = 4/478 (0%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +Q +V RHVS AD+VSLRDIARER+D+VAERMHRLP+E+LEELK GL+AILEGNGA Sbjct: 1 DSHDQ--HVIRHVSIADKVSLRDIARERLDIVAERMHRLPEEYLEELKNGLKAILEGNGA 58 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQ+RSDLTS+TLV+AHRVQLE+LV INTGIQAFLHPNI+LSQSSLIEI Sbjct: 59 QPIDEFMFLQKFVQTRSDLTSKTLVRAHRVQLEVLVVINTGIQAFLHPNINLSQSSLIEI 118 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPAD C C+IC+N+KGFCNLCMCVIC+KFDFA NTCRWIGCDVCSH Sbjct: 119 FVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTCRWIGCDVCSH 178 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 W HTDCAIR+G I MG S K SGM EMLF C ACNHTSEL G+VKDVFQHCAPNWD E+ Sbjct: 179 WTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRES 238 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L+KELDFV +IFRGSED RG+KLFWK +EL+EK+K L + A ILMFFQE + DSP Sbjct: 239 LMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGGLAEA-TAAKLILMFFQEIELDSP 297 Query: 301 -SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK 359 SLE+GEGG IAPQDACN IAEVV++T RKME+V EEK RM+KKAR L+ C+RE+E+K Sbjct: 298 KSLESGEGGGTIAPQDACNRIAEVVKETLRKMEIVGEEKTRMYKKARMGLEECEREVEEK 357 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A V +L+MERQKKK QIEE+E IVRLKQAEA+MFQLKA+EA+ EAE Sbjct: 358 AKQVAELQMERQKKKQQIEEVERIVRLKQAEAEMFQLKANEAKVEAERLERIVKAKKEKT 417 Query: 420 XXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 Y S YLKLRLSEAE ++YLFE++K QE+ + + M S+IR +L G + Sbjct: 418 EEEYASNYLKLRLSEAEAEKEYLFEKIKEQESGGNGGEASQAVMYSKIREMLHGYNAS 475 >gi|30385713|gb|AAP22955.1| Potyvirus VPg interacting protein [Pisum sativum] Length = 513 Score = 644 bits (1661), Expect = 0.0 Identities = 321/471 (68%), Positives = 367/471 (77%), Gaps = 5/471 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R VS+AD +SL+DIARERVDV+ +RMHRLPDEFL+ELK GLRAILEG NG+Q +DEF Sbjct: 24 SVIRRVSSADRISLQDIARERVDVICDRMHRLPDEFLDELKNGLRAILEGGNGSQHRDEF 83 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 LQK VQSRSDLT++TL++AHRVQLEILV+INTGIQ FLHP+ISLSQ+SLIEIFLYKRC Sbjct: 84 FILQKLVQSRSDLTAKTLIRAHRVQLEILVSINTGIQGFLHPSISLSQTSLIEIFLYKRC 143 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIACQN LPAD+C D C+N GFCNLCMCVICSKFDF NTCRWIGCD+ SHW HTDC Sbjct: 144 RNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLXSHWTHTDC 203 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AIRE LI MG S K SG +EM+F C AC+ TS L G+VKDVFQHCAP+WD +ALI+ELD Sbjct: 204 AIREQLICMGPSVKSGSGPSEMVFRCQACSXTSXLLGWVKDVFQHCAPSWDGDALIRELD 263 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 FV +IF GS+D RG LFWK D+L EKLKS+ +D AC ILM FQE D D S SLEN Sbjct: 264 FVSRIFHGSKDQRGMNLFWKCDDLKEKLKSRKMDSKAACRAILMVFQELDLDNSKSLENA 323 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 E G LIAPQ+ACN IAEVVQ+ RKME VA+EKMRMFKKAR ++ACDREL DKA D Sbjct: 324 ESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARIAVEACDRELADKAREAGD 383 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LK+ERQKKK QIEELE IVRLK AEADMFQLKA+EA+REAE YTS Sbjct: 384 LKVERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTS 443 Query: 426 KYLKLRLSEAEERRQYLFEELKAQEN---SQCDFDPMKMRMESEIRGLLKG 473 YLK +LSEAE +QYL+E++K QE+ SQ DP M M S+I LL Sbjct: 444 NYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLLYN 494 >DUF1423_Q84N37_19-496_PF07227.1 Length = 478 Score = 638 bits (1646), Expect = 0.0 Identities = 321/471 (68%), Positives = 367/471 (77%), Gaps = 5/471 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R VS+AD +SL+DIARERVDV+ +RMHRLPDEFL+ELK GLRAILEG NG+Q +DEF Sbjct: 6 SVIRRVSSADRISLQDIARERVDVICDRMHRLPDEFLDELKNGLRAILEGGNGSQHRDEF 65 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 LQK VQSRSDLT++TL++AHRVQLEILV+INTGIQ FLHP+ISLSQ+SLIEIFLYKRC Sbjct: 66 FILQKLVQSRSDLTAKTLIRAHRVQLEILVSINTGIQGFLHPSISLSQTSLIEIFLYKRC 125 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIACQN LPAD+C D C+N GFCNLCMCVICSKFDF NTCRWIGCD+ SHW HTDC Sbjct: 126 RNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLXSHWTHTDC 185 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AIRE LI MG S K SG +EM+F C AC+ TS L G+VKDVFQHCAP+WD +ALI+ELD Sbjct: 186 AIREQLICMGPSVKSGSGPSEMVFRCQACSXTSXLLGWVKDVFQHCAPSWDGDALIRELD 245 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 FV +IF GS+D RG LFWK D+L EKLKS+ +D AC ILM FQE D D S SLEN Sbjct: 246 FVSRIFHGSKDQRGMNLFWKCDDLKEKLKSRKMDSKAACRAILMVFQELDLDNSKSLENA 305 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 E G LIAPQ+ACN IAEVVQ+ RKME VA+EKMRMFKKAR ++ACDREL DKA D Sbjct: 306 ESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARIAVEACDRELADKAREAGD 365 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LK+ERQKKK QIEELE IVRLK AEADMFQLKA+EA+REAE YTS Sbjct: 366 LKVERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTS 425 Query: 426 KYLKLRLSEAEERRQYLFEELKAQEN---SQCDFDPMKMRMESEIRGLLKG 473 YLK +LSEAE +QYL+E++K QE+ SQ DP M M S+I LL Sbjct: 426 NYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLLYN 476 >gi|30385711|gb|AAP22954.1| Potyvirus VPg interacting protein [Nicotiana benthamiana] Length = 549 Score = 629 bits (1622), Expect = e-179 Identities = 306/475 (64%), Positives = 366/475 (77%), Gaps = 10/475 (2%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R++SN+D++SLRDIARERVDV+AERM LPDE+LE+ K LR ILEG GAQ ++EF Sbjct: 77 SVVRNISNSDKMSLRDIARERVDVIAERMRNLPDEYLEKFKHELRVILEGLGGAQHREEF 136 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 +FLQ+ V SR DLT TL+ HR QLEILVAI TGIQAFLHP++SLSQ+SLI+IFLYKRC Sbjct: 137 LFLQRLVNSRGDLTDGTLIITHRTQLEILVAIKTGIQAFLHPSVSLSQASLIDIFLYKRC 196 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIAC ++LPA++C C+IC+ K GFCNLCMCVIC KFDF N+CRWIGCD+CSHW HTDC Sbjct: 197 RNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGCDLCSHWTHTDC 256 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AI G I G S K + E LF C AC+ TSEL G+VKDVFQHCAP+WD EA ++ELD Sbjct: 257 AISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLGWVKDVFQHCAPSWDAEAFVRELD 316 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 +VR+IF+ SEDARG+KLFWK +ELIEKLK+ + DP+ AC IL FFQE D D S S +N Sbjct: 317 YVRRIFQRSEDARGRKLFWKCEELIEKLKNGVADPM-ACKVILSFFQELDVDPSKSQDND 375 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EGG LIAP++A N+IA+VVQ+ RKME VAEEKMRM KKAR LDACD+EL+DKA VT Sbjct: 376 EGGRLIAPEEAFNKIADVVQEAIRKMEAVAEEKMRMVKKARLALDACDQELKDKAREVTS 435 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LKMERQ+KK QI+ELESIVRLKQAEADMF LKA EARREAE Y S Sbjct: 436 LKMERQRKKQQIDELESIVRLKQAEADMFDLKAGEARREAERLQRIALAKTEKSEEDYAS 495 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQC------DFDPMKMRMESEIRGLLKGM 474 +YLK RLSEAE +QYLFE++K QE+S+ DP +M M S+I+ L+K M Sbjct: 496 RYLKQRLSEAEAEKQYLFEKIKLQESSRASQSSAGGNDPSQM-MYSKIQDLIKNM 549 >DUF1423_Q84N38_72-549_PF07227.1 Length = 478 Score = 622 bits (1604), Expect = e-177 Identities = 306/475 (64%), Positives = 366/475 (77%), Gaps = 10/475 (2%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R++SN+D++SLRDIARERVDV+AERM LPDE+LE+ K LR ILEG GAQ ++EF Sbjct: 6 SVVRNISNSDKMSLRDIARERVDVIAERMRNLPDEYLEKFKHELRVILEGLGGAQHREEF 65 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 +FLQ+ V SR DLT TL+ HR QLEILVAI TGIQAFLHP++SLSQ+SLI+IFLYKRC Sbjct: 66 LFLQRLVNSRGDLTDGTLIITHRTQLEILVAIKTGIQAFLHPSVSLSQASLIDIFLYKRC 125 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIAC ++LPA++C C+IC+ K GFCNLCMCVIC KFDF N+CRWIGCD+CSHW HTDC Sbjct: 126 RNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGCDLCSHWTHTDC 185 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AI G I G S K + E LF C AC+ TSEL G+VKDVFQHCAP+WD EA ++ELD Sbjct: 186 AISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLGWVKDVFQHCAPSWDAEAFVRELD 245 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 +VR+IF+ SEDARG+KLFWK +ELIEKLK+ + DP+ AC IL FFQE D D S S +N Sbjct: 246 YVRRIFQRSEDARGRKLFWKCEELIEKLKNGVADPM-ACKVILSFFQELDVDPSKSQDND 304 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EGG LIAP++A N+IA+VVQ+ RKME VAEEKMRM KKAR LDACD+EL+DKA VT Sbjct: 305 EGGRLIAPEEAFNKIADVVQEAIRKMEAVAEEKMRMVKKARLALDACDQELKDKAREVTS 364 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LKMERQ+KK QI+ELESIVRLKQAEADMF LKA EARREAE Y S Sbjct: 365 LKMERQRKKQQIDELESIVRLKQAEADMFDLKAGEARREAERLQRIALAKTEKSEEDYAS 424 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQC------DFDPMKMRMESEIRGLLKGM 474 +YLK RLSEAE +QYLFE++K QE+S+ DP +M M S+I+ L+K M Sbjct: 425 RYLKQRLSEAEAEKQYLFEKIKLQESSRASQSSAGGNDPSQM-MYSKIQDLIKNM 478 >gi|8778236|gb|AAF79245.1| F10B6.14 [Arabidopsis thaliana] Length = 760 Score = 605 bits (1560), Expect = e-172 Identities = 231/481 (48%), Positives = 302/481 (62%), Gaps = 14/481 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 285 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 342 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 343 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 402 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 403 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 462 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 463 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 522 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF S Sbjct: 523 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNCKFLIST 582 Query: 301 SLENGEGGF----LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 + F L++ A E + D R++ V AE R K SV + ++ Sbjct: 583 CIRFYRLKFDYILLLSQFLADAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQ 640 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 + K+ A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 641 KKKSFALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKT 694 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+ Sbjct: 695 EKMEEEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEV 754 Query: 477 T 477 T Sbjct: 755 T 755 >DUF1423_Q9LQV7_285-755_PF07227.1 Length = 471 Score = 575 bits (1484), Expect = e-163 Identities = 231/481 (48%), Positives = 302/481 (62%), Gaps = 14/481 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 1 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 58 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 59 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 118 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 119 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 178 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 179 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 238 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF S Sbjct: 239 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNCKFLIST 298 Query: 301 SLENGEGGF----LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 + F L++ A E + D R++ V AE R K SV + ++ Sbjct: 299 CIRFYRLKFDYILLLSQFLADAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQ 356 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 + K+ A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 357 KKKSFALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKT 410 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+ Sbjct: 411 EKMEEEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEV 470 Query: 477 T 477 T Sbjct: 471 T 471 >gi|20148719|gb|AAM10250.1| unknown protein [Arabidopsis thaliana] Length = 733 Score = 574 bits (1481), Expect = e-162 Identities = 227/477 (47%), Positives = 295/477 (61%), Gaps = 33/477 (6%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 285 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 342 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 343 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 402 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 403 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 462 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 463 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 522 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF Sbjct: 523 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFN------- 575 Query: 301 SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA 360 E + D R++ V AE R K SV + ++ + K+ Sbjct: 576 ----------------YAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQKKKS 617 Query: 361 CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXX 420 A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 618 FALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKTEKME 671 Query: 421 XXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+T Sbjct: 672 EEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEVT 728 >gi|28973711|gb|AAO64172.1| unknown protein [Arabidopsis thaliana] Length = 975 Score = 550 bits (1417), Expect = e-155 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 514 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 571 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 572 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 631 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 632 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 691 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 692 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 751 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 752 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 809 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER-QKKKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 810 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 868 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 869 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 928 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 929 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 969 >gi|7573333|emb|CAB87803.1| putative protein [Arabidopsis thaliana] Length = 1162 Score = 541 bits (1395), Expect = e-152 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 701 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 758 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 759 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 818 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 819 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 878 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 879 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 938 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 939 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 996 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER-QKKKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 997 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 1055 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 1056 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 1115 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 1116 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 1156 >DUF1423_Q84TI3_497-969_PF07227.1 Length = 473 Score = 523 bits (1348), Expect = e-147 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 18 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 75 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 76 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 135 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 136 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 195 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 196 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 255 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 256 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 313 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER-QKKKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 314 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 372 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 373 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 432 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 433 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 473 >gi|50918667|ref|XP_469730.1| unknown protein [Oryza sativa (japonica cultivar-group)] Length = 378 Score = 244 bits (624), Expect = 4e-63 Identities = 60/280 (21%), Positives = 102/280 (36%), Gaps = 43/280 (15%) Query: 139 DCDCDICSNKKGFCNLCMCVICSKF-DFASNTCRWIGCD-------VCSHWCHTDCAIRE 190 DCD+C FC C CV C + D++ +I C+ +C H H DCA+R Sbjct: 45 AQDCDLCCKMPDFCRECCCVFCRRVVDYSFGGYSYIKCEAVLEENKICGHIGHLDCALR- 103 Query: 191 GLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRK 250 M + G +M + C C++ + L V+ + C + + L+ Sbjct: 104 --TFMAGTVGGCID-LDMQYCCRRCDNKTNLMLHVEKFLEICQSLQSRDDIEPILNTGLC 160 Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLI--------------------DPLDACNFILM 290 + RGS R K L + KLK + P +L Sbjct: 161 LVRGSRQTRAKSLESIMRSAMAKLKCGVDLAEVWKMEDNGINSTPSAEVSPATGGVTVLG 220 Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 Q + D+P GF A N++ V++ + E++ + + +D Sbjct: 221 IQQAPEEDAP------PGFPYYVDLADNDLQRAVENLP---AYITEDQHTLSVRFEDSID 271 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 +EL K + K+ QK Q + + S+ R +E Sbjct: 272 HALKEL--KRSQEAEYKLAEQKLYSQKDHVLSLYRQLDSE 309 >gi|8778731|gb|AAF79739.1| T25N20.6 [Arabidopsis thaliana] Length = 481 Score = 223 bits (568), Expect = 1e-56 Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 43/300 (14%) Query: 122 LYKRCRNI--ACQN-LLPADDCDCDICSNKKGFCNLCMCVICSKFDF-ASNTCRWIGCD- 176 ++CR++ C+ LPA CDIC ++ FC C C++C K +I C+ Sbjct: 176 GNEKCRSLMPQCEAETLPA--MPCDICCGERKFCVDCCCILCCKLISLEHGGYSYIKCEA 233 Query: 177 ------VCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQ 230 +C H H +CA+R + + G+ G + ++C C+ +LF V + Sbjct: 234 VVSEGHICGHVAHMNCALRA---YLAGTIGGSMG-LDTEYYCRRCDAKKDLFPHVNKFLE 289 Query: 231 HCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEK----LKSKLIDPLDA-C 285 C + K L+ I RG++ K+L + + K L D +A Sbjct: 290 ICQTVEYQGDVEKILNLGICILRGAQRDNAKELLNCIESTVIKIIFILVVDYSDSGEARE 349 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV---VAEEKMRMF 342 N L Q+ P N E EI EV++ + E +AE K+ Sbjct: 350 NDTLQSLQDVTPIGPIPFNHEA----EMHKLEEEIGEVLRALRKAQEFEYQIAEGKLHAQ 405 Query: 343 KKARSVLDACDRELEDKACAVTD---------LKMERQKKKPQIEELESIVRLKQAEADM 393 K+ S L R+LE + ++ L K+ QI + + +LK+ E Sbjct: 406 KECLSDL---YRQLEKEKSELSRRVSGTDANSLMTNVLKRLDQIR--KEVTKLKEMEEVA 460 >gi|14583098|gb|AAK69758.1| CDPK adapter protein 1 [Mesembryanthemum crystallinum] Length = 479 Score = 220 bits (562), Expect = 5e-56 Identities = 71/348 (20%), Positives = 133/348 (38%), Gaps = 67/348 (19%) Query: 107 HPNISLSQSSLIE------IFLYKRCR--NIACQNLLPAD------DCDCDICSNKKGFC 152 H ++ +S + E + C+ N C +LL + CD+C ++ FC Sbjct: 141 HGSVRISSEEVAEQSPSGPLTGTAVCKAGNRFCSSLLEEEISPSAAAQSCDVCCSEPSFC 200 Query: 153 NLCMCVICSK-FDFASNTCRWIGCD-------VCSHWCHTDCAIREGLIKMGHSAKGASG 204 C C++C D A +I C+ +C H H +CA+R M + G+ G Sbjct: 201 RDCSCILCCNTIDLAYGGYSFIRCEAIVHDDVICGHAAHINCALRS---YMAGTVGGSVG 257 Query: 205 MTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLF 264 + ++C C+ ++L V + + C + + K L+ + RGS+ ++L Sbjct: 258 -LDTEYYCRRCDTRTDLTKHVTKLLKTCESIESRDDIEKMLNVASCLLRGSQKKGSERLL 316 Query: 265 WKADELIEKLKSKLI----------------DPLDACNFILMFFQECDSDSPSLENGEGG 308 + ++KLK LD N++ + D D +L + Sbjct: 317 NHIESALQKLKGGSDLQDVWKLEVDVMSLPTGQLDYTNYV-----QVDIDENNLSHQN-- 369 Query: 309 FLIAPQDACNEIAEVVQDTARKMEV---VAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EI +V+ + R EV +A+E++R K S L ++++ + +T Sbjct: 370 ---ECLKLEVEIDQVLHELRRSQEVEYRLAQERLRAQKDHLSSL---YQQMDKEKSELTR 423 Query: 366 L--KMERQKKKPQI----EELE-SIVRLKQAE--ADMFQLKADEARRE 404 R + E ++ + +LK E A F E +E Sbjct: 424 YPPSTNRNALLSSVIVKEEYIQCELSKLKNMEKVAKGFGKTPKEILKE 471 >gi|51535981|dbj|BAD38062.1| putative coiled-coil protein [Oryza sativa (japonica cultivar-group)] Length = 749 Score = 202 bits (515), Expect = 1e-50 Identities = 45/239 (18%), Positives = 79/239 (33%), Gaps = 41/239 (17%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC--------DV 177 C N+AC+ L +D FC C C IC K+D + W+ C D Sbjct: 143 CHNLACRATLNPED----------KFCRRCSCCICFKYDDNKDPSLWLFCSSDQPLQKDS 192 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWD 237 C CH +CA+++G + G G + ++C C ++L G K Sbjct: 193 CVFSCHLECALKDG--RTGIMQSGQCKKLDGGYYCTRCRKQNDLLGSWKKQLVIAKDARR 250 Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA-CNFILMFFQECD 296 + L + KI +E L D ++KL++++ P+ N Sbjct: 251 LDVLCHRIFLSHKILVSTEKY--LVLHEIVDTAMKKLEAEV-GPISGVANMGRGIVSRLA 307 Query: 297 SDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRE 355 + Q C E ++ F+++R + + Sbjct: 308 VGA------------EVQKLCARAIETMESL-----FCGSPSNLQFQRSRMIPSNFVKF 349 >gi|50942423|ref|XP_480739.1| putative coiled-coil protein [Oryza sativa (japonica cultivar-group)] Length = 630 Score = 195 bits (497), Expect = 2e-48 Identities = 41/177 (23%), Positives = 70/177 (39%), Gaps = 22/177 (12%) Query: 123 YKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDV----- 177 CRN+ACQ L + D +C C C IC K+D + W+ C Sbjct: 126 TAVCRNVACQATLNSGD----------AYCKRCSCCICHKYDENKDPSLWLVCSSDTPYS 175 Query: 178 ---CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAP 234 C CH CA++ K G G + ++ F+C+ C + L ++ Sbjct: 176 GYSCGTSCHLKCALKNK--KAGIFKNGCNKKSDGSFYCVWCGKMNWLMRNLRKQLAIARE 233 Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMF 291 + + L + L K+ +GSE R +L + ++ L+ ++ LD + I Sbjct: 234 SRRVDVLCERLSLTHKMVKGSERYR--ELANIINSAVKILEKEVGCALDQVSAITGR 288 >gi|40804910|gb|AAR91717.1| vernalization insensitive 3 [Arabidopsis thaliana] Length = 600 Score = 193 bits (492), Expect = 6e-48 Identities = 43/159 (27%), Positives = 66/159 (41%), Gaps = 19/159 (11%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTD 185 C N+AC+ L DD FC C C IC KFD + W+ CD C CH + Sbjct: 110 CENLACRAALGCDDT----------FCRRCSCCICQKFDDNKDPSLWLTCDACGSSCHLE 159 Query: 186 CAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKEL 245 C +++ +G S + F+C C ++L G + + + L L Sbjct: 160 CGLKQDRYGIG------SDDLDGRFYCAYCGKDNDLLGCWRKQVKVAKETRRVDVLCYRL 213 Query: 246 DFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 +K+ RG+ R L DE ++KL+ + PL Sbjct: 214 SLGQKLLRGTTKYR--NLLELMDEAVKKLEGDV-GPLSG 249 >gi|9294095|dbj|BAB01947.1| unnamed protein product [Arabidopsis thaliana] Length = 602 Score = 186 bits (472), Expect = 1e-45 Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 29/170 (17%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCD--------V 177 C+N +C+ +P +D FC C C +C FD + W+ C+ Sbjct: 49 CKNASCRANVPKED----------SFCKRCSCCVCHNFDENKDPSLWLVCEPEKSDDVEF 98 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWD 237 C CH +CA RE +K+G A G + F C +C S++ G K Sbjct: 99 CGLSCHIECAFRE--VKVGVIALGNLMKLDGCFCCYSCGKVSQILGCWKKQLVAAKEARR 156 Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID---PLDA 284 + L +D ++ G+ F + E++ KS L D PLD Sbjct: 157 RDGLCYRIDLGYRLLNGTSR------FSELHEIVRAAKSMLEDEVGPLDG 200 >gi|51038197|gb|AAT94000.1| unknow protein [Oryza sativa (japonica cultivar-group)] Length = 607 Score = 178 bits (453), Expect = 2e-43 Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 28/169 (16%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC-------DVC 178 C+N+AC+ ++ ++D FC C C IC +FD + W+ C + C Sbjct: 53 CKNLACKAVVTSED----------SFCKRCSCCICHQFDDNKDPSLWLVCASENDDKNCC 102 Query: 179 SHWCHTDCAI---REGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPN 235 CH +CA+ R G +G+ + + + C +C S + G+ K Sbjct: 103 GSSCHIECALQHKRVGCFNLGNIIQ-----LDGSYSCASCGKVSGILGYWKRQLVIAKDA 157 Query: 236 WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 + L + ++ G+ R K+L ++ KL+S++ PLD Sbjct: 158 RRVDMLCHRIYLSYRLLGGT--TRFKELHGIIEDAKAKLESEV-GPLDG 203 >gi|60547711|gb|AAX23819.1| hypothetical protein At2g18880 [Arabidopsis thaliana] Length = 529 Score = 161 bits (408), Expect = 4e-38 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 22/170 (12%) Query: 122 LYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC------ 175 C+N+ACQN L + FC C C IC K+D + W+ C Sbjct: 115 GKMYCQNLACQNKLREEAT----------FCKRCSCCICFKYDDNKDPSLWLTCNSDSQF 164 Query: 176 --DVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 + C CH +CA K G S + F+C++C T+ +K Sbjct: 165 DGESCGLSCHLNCAFDSE--KSGLKEDTPSSDIDGCFNCVSCGKTNSKIECLKKQLIIAN 222 Query: 234 PNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLD 283 + K+ +G++ + ++ + LK++ P+ Sbjct: 223 EERRVGVFCYRILLAHKLLKGTKKYIIVS--EEVEKAVMHLKNEFGVPIS 270 >gi|33339558|gb|AAQ14302.1| ABRH1 [Marsilea quadrifolia] Length = 148 Score = 159 bits (404), Expect = 1e-37 Identities = 64/143 (44%), Positives = 86/143 (60%) Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 NE+ E ++ + V K+ K+R+VL D LEDK +L+ ER +K+ +I Sbjct: 5 NEVTEGQENLPKAAAAVGGSKLMEMDKSRAVLQNFDCNLEDKRPVAAELQFERARKRAEI 64 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE 437 E++ES+VR+KQAEA MFQ++ADEAR+EA +T KY KLRLSEAEE Sbjct: 65 EDIESVVRIKQAEAKMFQIRADEARKEAGGLQRIIVAKREKIEEDFTCKYKKLRLSEAEE 124 Query: 438 RRQYLFEELKAQENSQCDFDPMK 460 RRQ EEL+A EN+Q DF K Sbjct: 125 RRQKRLEELQALENAQNDFHKKK 147 >gi|7269920|emb|CAB81013.1| putative protein [Arabidopsis thaliana] Length = 714 Score = 159 bits (403), Expect = 2e-37 Identities = 40/170 (23%), Positives = 64/170 (37%), Gaps = 25/170 (14%) Query: 123 YKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC------- 175 C+N+AC+ +L +D FC C C IC K+D + W+ C Sbjct: 143 TIYCKNLACRAVLRQED----------SFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFE 192 Query: 176 -DVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAP 234 + C CH +CA +G + F+C++C + L K Sbjct: 193 GESCGFSCHLECAFNTEKSGLGKDKQS----EGCCFYCVSCGKANSLLECWKKQLTIAKE 248 Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 E L L V+K+ + S R L DE ++ L++ + PL Sbjct: 249 TRRVEVLCYRLFLVQKLLKSSTKYR--NLCEVVDEAVKTLEADV-GPLTG 295 >gi|50759355|ref|XP_425739.1| PREDICTED: similar to C-ski protein FB28 - chicken [Gallus gallus] Length = 2940 Score = 146 bits (370), Expect = 9e-34 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 28/174 (16%) Query: 256 EDARGKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGE 306 D+ L + + L + L S L F + M ++ + + +L+ + E Sbjct: 2743 SDSHSSGLEAELEHLRQALDSGLDTKEAKEKFLHEVVKMRVKQEEKLNAALQAKRSLHQE 2802 Query: 307 GGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE-------- 357 FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 2803 LEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVC 2862 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 2863 DKGCEAGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 2911 >gi|18859373|ref|NP_571010.1| nuclear oncoprotein skia [Danio rerio] Length = 727 Score = 144 bits (363), Expect = 7e-33 Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 28/179 (15%) Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLEN-- 304 + G E L + + L + L + L F + M ++ + +L+ Sbjct: 522 LLSGGEGHAMNNLESELETLRQALDNGLDSKESKEKFLHEIVKMRVKQEEKLGSALQAKR 581 Query: 305 ---GEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--- 357 E FL +A ++ E E ++ +++E + E R ++A RELE Sbjct: 582 SLQQELEFLRVAKKEKLREATEAKRNLRKEIERLRAESERKMREANESRMRLKRELEQAR 641 Query: 358 -----DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 642 QLRVCDKGCEAGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLIHEREAREHLE 695 >gi|41326957|emb|CAF20801.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Corynebacterium glutamicum ATCC 13032] Length = 852 Score = 143 bits (362), Expect = 8e-33 Identities = 47/193 (24%), Positives = 71/193 (36%), Gaps = 48/193 (24%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ G ++ E+ V+ + AE R Sbjct: 334 RFQQVYVGEPTVEDAIG--ILRGLKERYEVHHGVRIQDSALVAAAELSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME +I+ELE IVR + E ++D A +E Sbjct: 384 -TSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEIEEMALSKESDAASKE- 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA----QENSQCDFDPMK- 460 + KLR A+ER ELKA ++ + D MK Sbjct: 442 --------------------RLEKLRSELADERE--KLSELKARWQNEKTAIDDVREMKE 479 Query: 461 ----MRMESEIRG 469 +R ES+I Sbjct: 480 ELEALRSESDIAE 492 >gi|23494457|dbj|BAC19423.1| putative endopeptidase Clp ATP-binding chain B [Corynebacterium efficiens YS-314] Length = 852 Score = 138 bits (347), Expect = 4e-31 Identities = 47/193 (24%), Positives = 68/193 (35%), Gaps = 48/193 (24%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ G ++ E+ V+ + AE R Sbjct: 334 RFQQVYVGEPSVEDTVG--ILRGLKERYEVHHGVRIQDSALVAAAELSHRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME +I+ELE IVR + E + D A RE Sbjct: 384 -TSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEIEEVALTKETDVASRE- 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA----QENSQCDFDPMK- 460 + +LR A+ER ELKA ++ D K Sbjct: 442 --------------------RLERLRSELADERE--KLSELKARWQNEKAVIDDVRKFKE 479 Query: 461 ----MRMESEIRG 469 +R ES+I Sbjct: 480 ELEALRSESDIAE 492 >gi|1351069|sp|P49140|SKI_CHICK Ski oncogene (C-ski) Length = 750 Score = 135 bits (340), Expect = 3e-30 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 28/174 (16%) Query: 256 EDARGKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGE 306 D+ L + + L + L S L F + M ++ + + +L+ + E Sbjct: 553 SDSHSSGLEAELEHLRQALDSGLDTKEAKEKFLHEVVKMRVKQEEKLNAALQAKRSLHQE 612 Query: 307 GGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE-------- 357 FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 613 LEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVC 672 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 673 DKGCEAGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 721 >gi|104548|pir||B32575 C-ski protein FB28 - chicken Length = 713 Score = 134 bits (338), Expect = 5e-30 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 28/174 (16%) Query: 256 EDARGKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGE 306 D+ L + + L + L S L F + M ++ + + +L+ + E Sbjct: 516 SDSHSSGLEAELEHLRQALDSGLDTKEAKEKFLHEVVKMRVKQEEKLNAALQAKRSLHQE 575 Query: 307 GGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE-------- 357 FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 576 LEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVC 635 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 636 DKGCEAGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 684 >gi|73956613|ref|XP_546730.2| PREDICTED: similar to Ski oncogene (C-ski) [Canis familiaris] Length = 790 Score = 133 bits (336), Expect = 8e-30 Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 28/173 (16%) Query: 257 DARGKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGEG 307 D L + + L + L+ L F + M ++ + S +L+ + E Sbjct: 594 DTTSGGLEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLSAALQAKRSLHQEL 653 Query: 308 GFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------D 358 FL +A ++ E E ++ +++E + E + ++A RELE D Sbjct: 654 EFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMREANESRLRLKRELEQARQVRVCD 713 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 K C L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 714 KGCEAGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLLREREAREHLE 761 >gi|4506967|ref|NP_003027.1| v-ski sarcoma viral oncogene homolog [Homo sapiens] Length = 728 Score = 132 bits (332), Expect = 3e-29 Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 28/168 (16%) Query: 262 KLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGEGGFL-I 311 L + + L + L+ L F + M ++ + S +L+ + E FL + Sbjct: 537 GLEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLSAALQAKRSLHQELEFLRV 596 Query: 312 APQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACAV 363 A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 597 AKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRLRLKRELEQARQARVCDKGCEA 656 Query: 364 TDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 657 GRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLLREREAREHLE 699 >gi|6048269|emb|CAB58126.1| c-ski protein [Oreochromis aureus] Length = 714 Score = 131 bits (331), Expect = 3e-29 Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 28/170 (16%) Query: 260 GKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLEN-----GEGGFL 310 L + + L + L S L F + M ++ + +L+ E FL Sbjct: 538 ESGLESELESLRQALDSGLDSKESKEKFLHEIVKMRVKQEEKLGSALQAKRSLQQELEFL 597 Query: 311 -IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKAC 361 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 598 RVAKKEKLREATEAKRNLRKEIERLRAESEKKMKEANESRIRLKRELEQARQLRVCDKGC 657 Query: 362 AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L+ ++L+ AEAD QL+AD EAR E Sbjct: 658 EAGRL---RAKYSAQIEDLQ--MKLQHAEADREQLRADLLHEREAREHLE 702 >DUF1423_Q7X9D9_31-147_PF07227.1 Length = 117 Score = 130 bits (327), Expect = 9e-29 Identities = 59/117 (50%), Positives = 76/117 (64%) Query: 344 KARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 K+R+VL D LEDK +L+ ER +K+ +IE++ES+VR+KQAEA MFQ++ADEAR+ Sbjct: 1 KSRAVLQNFDCNLEDKRPVAAELQFERARKRAEIEDIESVVRIKQAEAKMFQIRADEARK 60 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMK 460 EA +T KY KLRLSEAEERRQ EEL+A EN+Q DF K Sbjct: 61 EAGGLQRIIVAKREKIEEDFTCKYKKLRLSEAEERRQKRLEELQALENAQNDFHKKK 117 >gi|158818|gb|AAA29025.1| zinc-binding protein Length = 3759 Score = 129 bits (325), Expect = 2e-28 Identities = 29/148 (19%), Positives = 45/148 (30%), Gaps = 28/148 (18%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLCM--------CVICSK-FDFASNTCRWIG 174 R + C N L C S G C C C IC + +D + + Sbjct: 1383 RPLICVNCLKCKSCSTTKVSKFVGNLPMCTGCFKLRKKGNFCPICQRCYDDNDFDLKMME 1442 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 C C W H+ C + + + + + F C C +E + A Sbjct: 1443 CGDCGQWVHSKCEGLSDEQYNLLSTL-----PESIEFICKKCARRNE-------SSKIKA 1490 Query: 234 PNWDFEALIK---ELDFVRKIFRGSEDA 258 W + + L V K+ S A Sbjct: 1491 EEWRQAVMEEFKASLYSVLKLLSKSRQA 1518 >gi|1052593|emb|CAA90513.1| trithorax protein trxII [Drosophila melanogaster] Length = 3726 Score = 129 bits (325), Expect = 2e-28 Identities = 29/148 (19%), Positives = 45/148 (30%), Gaps = 28/148 (18%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLCM--------CVICSK-FDFASNTCRWIG 174 R + C N L C S G C C C IC + +D + + Sbjct: 1383 RPLICVNCLKCKSCSTTKVSKFVGNLPMCTGCFKLRKKGNFCPICQRCYDDNDFDLKMME 1442 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 C C W H+ C + + + + + F C C +E + A Sbjct: 1443 CGDCGQWVHSKCEGLSDEQYNLLSTL-----PESIEFICKKCARRNE-------SSKIKA 1490 Query: 234 PNWDFEALIK---ELDFVRKIFRGSEDA 258 W + + L V K+ S A Sbjct: 1491 EEWRQAVMEEFKASLYSVLKLLSKSRQA 1518 >gi|21322226|ref|NP_035515.1| Sloan-Kettering viral oncogene homolog [Mus musculus] Length = 725 Score = 129 bits (324), Expect = 2e-28 Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 28/169 (16%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGEGGFL- 310 L + + L + L+ L F + M ++ + + +L+ + E FL Sbjct: 533 SGLEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLTAALQAKRTLHQELEFLR 592 Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 593 VAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRVRLKRELEQARQVRVCDKGCE 652 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K Q+E+L++ +L+ AEAD QL+AD EAR E Sbjct: 653 AGRL---RAKYSAQVEDLQA--KLQHAEADREQLRADLLREREAREHLE 696 >gi|46329445|gb|AAH68305.1| Ski protein [Mus musculus] Length = 675 Score = 127 bits (320), Expect = 5e-28 Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 28/169 (16%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGEGGFL- 310 L + + L + L+ L F + M ++ + + +L+ + E FL Sbjct: 483 SGLEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLTAALQAKRSLHQELEFLR 542 Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E + +++E + E + K+A RELE DK C Sbjct: 543 VAKKEKLREATEAKRSLRKEIERLRAENEKKMKEANESRVRLKRELEQARQVRVCDKGCE 602 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L++ +L+ AEAD QL+AD EAR E Sbjct: 603 AGRL---RAKYSAQIEDLQA--KLQHAEADREQLRADLLREREAREHLE 646 >gi|62650161|ref|XP_233731.3| PREDICTED: similar to Ski protein [Rattus norvegicus] Length = 465 Score = 124 bits (312), Expect = 5e-27 Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 28/169 (16%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGEGGFL- 310 L + + L + L+ L F + M ++ + + +L+ + E FL Sbjct: 273 SGLEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLTAALQAKRSLHQELEFLR 332 Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E + +++E + E + K+A RELE DK C Sbjct: 333 VAKKEKLREATEAKRSLRKEIERLRAENEKKMKEANESRVRLKRELEQARQVRVCDKGCE 392 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L++ +L+ AEAD QL+AD EAR E Sbjct: 393 AGRL---RAKYSAQIEDLQA--KLQHAEADREQLRADLLREREAREHLE 436 >gi|65101|emb|CAA48642.1| c-ski [Xenopus laevis] Length = 717 Score = 124 bits (311), Expect = 6e-27 Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 28/173 (16%) Query: 257 DARGKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLEN-----GEG 307 D L + + L + L S L F + M ++ + + +L+ E Sbjct: 521 DQHCSGLEAELEHLKQALDSGLDSKEAKEKFLHEVVKMRVKQEEKLNAALQAKRSLQQEL 580 Query: 308 GFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------D 358 FL +A ++ E E ++ +++E + E + K+A RELE D Sbjct: 581 EFLRVAKKEKLREATEAKRNLRKEIERLRAEHEKKMKEANESRLRLKRELEQARQIRVCD 640 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 K C + R K QIEEL+S +L+ AE D QL+ D EAR E Sbjct: 641 KGCEAGRI---RVKYSAQIEELQS--KLQHAENDREQLRTDLVHEREAREHLE 688 >gi|38234653|ref|NP_940420.1| Putative ATP-dependent protease regulatory subunit, ClpB [Corynebacterium diphtheriae NCTC 13129] Length = 849 Score = 120 bits (301), Expect = 9e-26 Identities = 44/193 (22%), Positives = 67/193 (34%), Gaps = 48/193 (24%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ G ++ E+ V+ + A R Sbjct: 334 RFQQVFVGEPSVEDAVG--ILRGLKERYEVHHGVRIQDSALVAAATLSDRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME +I+ELE IVR + E + D A ++ Sbjct: 384 -TSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEIEEVALSKETDAASKD- 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA----QENSQCDFDPMK- 460 + +KLR A+ER EL A ++ + K Sbjct: 442 --------------------RLIKLRQELADERE--KLGELVARWNNEKGAINKVREAKE 479 Query: 461 ----MRMESEIRG 469 +R ESEI Sbjct: 480 ELERLRSESEIAE 492 >gi|899254|emb|CAA90349.1| predicted trithorax protein [Drosophila virilis] Length = 3828 Score = 118 bits (297), Expect = 3e-25 Identities = 31/148 (20%), Positives = 47/148 (31%), Gaps = 28/148 (18%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLCM--------CVICSK-FDFASNTCRWIG 174 R + C N L C S G C C C IC K +D + + Sbjct: 1370 RPLICVNCLKCKSCATTKVSKFVGNLPMCTACFKLRKKGNFCPICQKCYDDNDFDLKMME 1429 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 C C+ W H+ C + + + + + F C C DV ++ A Sbjct: 1430 CGDCNQWVHSKCEGLSDEQYNLLSTL-----PESIEFICKKCARRC-------DVSRNKA 1477 Query: 234 PNWDFEALIK---ELDFVRKIFRGSEDA 258 W + + L V K+ S A Sbjct: 1478 DEWRQAVMEEFKSSLYSVLKLLSKSRQA 1505 >gi|55588008|ref|XP_524843.1| PREDICTED: similar to Ski oncogene (C-ski) [Pan troglodytes] Length = 577 Score = 114 bits (285), Expect = 6e-24 Identities = 43/202 (21%), Positives = 71/202 (35%), Gaps = 63/202 (31%) Query: 262 KLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGEGGFL-I 311 L + + L + L+ L F + M ++ + S +L+ + E FL + Sbjct: 289 GLEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLSAALQAKRSLHQELEFLRV 348 Query: 312 APQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACAV 363 A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 349 AKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRLRLKRELEQARQARVCDKGCEA 408 Query: 364 TDLKMERQKKKPQIEE-----------------------------------------LES 382 L R K Q+EE +E Sbjct: 409 GRL---RAKYSAQVEEGPARGTGEAQGAAQEPRVGEAASGRGRAASRRCCDHSAPFQIED 465 Query: 383 I-VRLKQAEADMFQLKADEARR 403 + V+L+ AEAD QL+AD R Sbjct: 466 LQVKLQHAEADREQLRADLLRE 487 >gi|41409951|ref|NP_962787.1| ClpB [Mycobacterium avium subsp. paratuberculosis K-10] Length = 848 Score = 114 bits (285), Expect = 7e-24 Identities = 42/193 (21%), Positives = 70/193 (36%), Gaps = 48/193 (24%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ G ++ E+ V+ T + A R Sbjct: 333 RFQQVFVGEPSVEDTVG--ILRGLKDRYEVHHGVRITDSALVAAATLSDRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + LKME + +I+E+E +VR + E + DEA +E Sbjct: 383 -TARFLPDKAIDLVDEAASRLKMEIDSRPVEIDEVERLVRRLEIEEMALAKEEDEASKE- 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL----KAQENSQCDFDPMK- 460 + KLR A+++ EL + ++N+ +K Sbjct: 441 --------------------RLEKLRSELADQKE--KLAELTTRWQNEKNAIDVVRELKE 478 Query: 461 ----MRMESEIRG 469 +R ES+ Sbjct: 479 QLETLRGESDRAE 491 >gi|68262865|emb|CAI36353.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Corynebacterium jeikeium K411] Length = 873 Score = 113 bits (283), Expect = 1e-23 Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 48/193 (24%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P+ E+ G ++ E+ V+ + A R Sbjct: 334 RFQQVYVGEPTAEDTIG--ILRGLKERYEVHHGVRIQDSALVAAATLSDRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME + +I+ +E +VR + E + + D A ++ Sbjct: 384 -TSRFLPDKAIDLVDEAASRLRMEIDSRPEEIDNVERVVRRLEIEEMALEKETDAASKD- 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA----QENSQCDFDPMK- 460 + +LR A+E+ L A ++ S +K Sbjct: 442 --------------------RLERLRSELADEKE--KLAGLTARWENEKGSIDSLRELKE 479 Query: 461 ----MRMESEIRG 469 +R ESEI Sbjct: 480 ELDNLRRESEIAE 492 >gi|4098131|gb|AAD00218.1| clpB [Mycobacterium bovis] Length = 877 Score = 110 bits (275), Expect = 9e-23 Identities = 42/193 (21%), Positives = 69/193 (35%), Gaps = 48/193 (24%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ G ++ E+ V+ T + A R Sbjct: 362 RFQQVYVGEPSVEDTIG--ILRGLKDRYEVHHGVRITDSALVAAATLSDRYI-------- 411 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME + +I+E+E +VR + E + DEA E Sbjct: 412 -TARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRLEIEEMALSKEEDEASAE- 469 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL----KAQENSQCDFDPMK- 460 + KLR A+++ EL + ++N+ +K Sbjct: 470 --------------------RLAKLRSELADQKE--KLAELTTRWQNEKNAIEIVRDLKE 507 Query: 461 ----MRMESEIRG 469 +R ESE Sbjct: 508 QLEALRGESERAE 520 >gi|104547|pir||C32575 C-ski protein FB27 - chicken Length = 649 Score = 99.5 bits (247), Expect = 2e-19 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 18/109 (16%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 517 VAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQARQIRVCDKGCE 576 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L R K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 577 AGRL---RAKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 620 >gi|68351395|gb|EAN32158.1| hypothetical protein, conserved [Theileria parva] Length = 3588 Score = 98.7 bits (245), Expect = 3e-19 Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 16/92 (17%) Query: 151 FCNLC--------MCVICSKFDFASNTCR--WIGCDVCSHWCHTDCAIREGLIKMGHSAK 200 FC C C IC K +T W+ C+ C W H +C LI S++ Sbjct: 1233 FCLKCWELLERSNYCGICYKVWTNFDTSSQKWVQCEGCKLWIHIECDDLARLITDCPSSR 1292 Query: 201 GASGMTEMLFHCIACNHTSELFGFVKDVFQHC 232 + + C+ C ++F K + Q Sbjct: 1293 NQN------YRCLICRSEDKMFRCTKALEQIF 1318 >gi|54027376|ref|YP_121618.1| putative Clp protease ATP-binding subunit [Nocardia farcinica IFM 10152] Length = 853 Score = 96.8 bits (240), Expect = 1e-18 Identities = 39/191 (20%), Positives = 68/191 (35%), Gaps = 44/191 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ G ++ E+ V+ T + A R Sbjct: 333 RFQQVLVGEPSVEDTVG--ILRGIKERYEVHHGVRITDSALVAAAALSDRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA + + L+ME + +I+E+E VR + E + DEA + Sbjct: 383 -TSRFLPDKAIDLVDESASRLRMEIDSRPVEIDEVERAVRRLEIEEVALSKETDEASK-- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ--YLFEELKAQENSQCDFDPMK--- 460 + KLR A++R + L + ++++ +K Sbjct: 440 -------------------LRLEKLRQELADDREKLNQLMTRWQNEKSAIDQVRTLKEQL 480 Query: 461 --MRMESEIRG 469 +R ESE Sbjct: 481 EALRGESERAE 491 >gi|15828345|ref|NP_302608.1| heat shock protein [Mycobacterium leprae TN] Length = 848 Score = 94.5 bits (234), Expect = 5e-18 Identities = 42/193 (21%), Positives = 70/193 (36%), Gaps = 48/193 (24%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ G ++ E+ V+ T + A R Sbjct: 333 RFQQIFVGEPSVEDTVG--ILRGLKDRYEVHHGVRITDSALVAAAALSDRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME + +I+E+E +VR + E + DEA +E Sbjct: 383 -TARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRFEIEEMALVNEEDEASKE- 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA----QENSQCDFDPMK- 460 + LR A+++ + EL A ++N+ +K Sbjct: 441 --------------------RLETLRAELADQKER--LAELTARWQNEKNAIDVVRELKE 478 Query: 461 ----MRMESEIRG 469 +R ESE Sbjct: 479 QLETLRGESERAE 491 >gi|68229264|ref|ZP_00568461.1| AAA ATPase, central region:Clp, N terminal [Frankia sp. EAN1pec] Length = 870 Score = 94.1 bits (233), Expect = 7e-18 Identities = 41/193 (21%), Positives = 67/193 (34%), Gaps = 48/193 (24%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PS+E+ G ++ E+ V+ T + A R Sbjct: 334 RFQPVMVGEPSVEDTIG--ILRGLKERYEVHHGVRITDSALVAAATLSDRYV-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME + ++ELE VR + E + D+A RE Sbjct: 384 -TARFLPDKAIDLMDEAASRLRMEIDSRPVAVDELERAVRRLEIEDMALSKENDDASRE- 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA----QENSQCDFDPMK- 460 + +L+ AE+R + L A ++NS + +K Sbjct: 442 --------------------RRDRLQRELAEKREE--LSALTARWQREKNSISEVQKIKE 479 Query: 461 ----MRMESEIRG 469 R +E+ Sbjct: 480 ELENARRAAEMAE 492 >gi|68172762|ref|ZP_00546043.1| AAA ATPase, central region:Clp, N terminal [Frankia sp. CcI3] Length = 869 Score = 93.3 bits (231), Expect = 1e-17 Identities = 39/183 (21%), Positives = 64/183 (34%), Gaps = 43/183 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ G ++ E+ V+ T + A R Sbjct: 334 RFQPVLVGEPTVEDTIG--ILRGLKERYEVHHGVRITDTALVAAATLSDRYV-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME + I+ELE VR + E + DEA RE Sbjct: 384 -TARFLPDKAIDLVDEAASRLRMEIDSRPVAIDELERAVRRLEIEDMALSKENDEASRE- 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA----QENSQCDFDPMKM 461 + +L+ A+ R + L A +++S + +K Sbjct: 442 --------------------RRGRLQRELADRREE--LSSLTARWHREKDSISEVQKIKE 479 Query: 462 RME 464 +E Sbjct: 480 ELE 482 >gi|65304433|emb|CAI76812.1| hypothetical protein, conserved [Theileria annulata] Length = 3595 Score = 92.6 bits (229), Expect = 2e-17 Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 16/92 (17%) Query: 151 FCNLC--------MCVICSKFDFASNTCR--WIGCDVCSHWCHTDCAIREGLIKMGHSAK 200 FC C C IC K + W+ C+ C W H +C LI S++ Sbjct: 1198 FCLKCWELLERSNYCGICYKVWTHFDGSSQKWVQCEGCKLWIHIECDDLARLITDCPSSR 1257 Query: 201 GASGMTEMLFHCIACNHTSELFGFVKDVFQHC 232 + + C C ++F K + Q Sbjct: 1258 NQN------YRCCICRSEDKMFRCTKALEQIF 1283 >gi|6048267|emb|CAB58125.1| c-ski protein [Oreochromis aureus] Length = 687 Score = 90.6 bits (224), Expect = 9e-17 Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 32/188 (17%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFF 292 P+W + E+ +R++ D + + E++ ++ K + L A Sbjct: 478 RPSWLPGTVCPEMGTMRQMLYAGLDTKEAR-EKLLQEIVR-MRVKQEEKLAAA------- 528 Query: 293 QECDSDSPSLENGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 + E F+ +A + E E ++ +++E + + R ++A Sbjct: 529 ----LQAKRSLQQELEFVRVAKKGRLREAIEAKRNLRKEIERLRVDWERKMREAEESCGR 584 Query: 352 CDRELE--------DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD---- 399 RELE DK C L R K QIEEL V+L+QAEAD QL+ + Sbjct: 585 LKRELERERQLRVCDKGCEAERL---RVKYSTQIEELH--VQLQQAEADREQLRRELQQE 639 Query: 400 -EARREAE 406 EAR+ E Sbjct: 640 REARQTLE 647 >gi|72160604|ref|YP_288261.1| ATPase [Thermobifida fusca YX] Length = 867 Score = 90.2 bits (223), Expect = 1e-16 Identities = 41/215 (19%), Positives = 68/215 (31%), Gaps = 62/215 (28%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS + ++ E VQ + A R Sbjct: 332 RFQQVMVNEPSAADTIA--ILRGLKGRYEAHHKVQIADSALVAAATLSDRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME + +I+EL+ +V + E ++D A ++ Sbjct: 382 -TARFLPDKAIDLIDEAASRLRMEIDSQPVEIDELQRVVDRLKMEEMALSKESDAASKQ- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ----------------------YLF 443 + +LR A++ Q Sbjct: 440 --------------------RLERLRADLADKEEQLNALIARWEQEKAGLNRVGELKEKL 479 Query: 444 EELKAQ-ENSQCDFD--PMKMRMESEIRGLLKGME 475 +EL+ Q E +Q D D M EI L + +E Sbjct: 480 DELRGQAERAQRDGDFEEASRLMYGEIPQLERQLE 514 >gi|18859375|ref|NP_571013.1| nuclear oncoprotein skib [Danio rerio] Length = 695 Score = 88.7 bits (219), Expect = 3e-16 Identities = 34/161 (21%), Positives = 62/161 (38%), Gaps = 29/161 (18%) Query: 264 FWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLENGEGGFLIAPQDAC-- 317 + + L + L S L F I M ++ + + +L+ + + Sbjct: 505 CSELELLKQTLSSDLSSKEAREKFLQEIIRMRVKQEEKLAAALQ---AKRSLQQELEFVR 561 Query: 318 -------NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 E E ++ +++E + E + + A D R+L+ DK C Sbjct: 562 VTKKGRLREAIEAKRNLRKEIERLRVECEKKVRDASESCDRLKRDLDRERRTRVCDKNCE 621 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 L R K QIE+L+ ++L+QAE D QL+ D + Sbjct: 622 AGRL---RAKYSSQIEDLQ--MKLQQAEVDREQLREDLLKE 657 >gi|61679305|gb|AAX52932.1| ClpB [Bifidobacterium animalis subsp. animalis] Length = 899 Score = 86.4 bits (213), Expect = 2e-15 Identities = 33/174 (18%), Positives = 55/174 (31%), Gaps = 39/174 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E V + A R Sbjct: 337 RFQQVFVGEPSVEDTIA--ILRGLKQRYEAHHKVTIGDDALVAAATLSNRYI-------- 386 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R+L DKA A L+ME + +I+EL+ V + E + D A +E Sbjct: 387 -TGRQLPDKAIDLVDEAAAHLRMELDSQPEEIDELQRKVTRLEMEEMQLKKAEDPASKE- 444 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPM 459 + KL+ A+ R L A+ N++ + Sbjct: 445 --------------------RLAKLQSELADARE--KLAGLNARWNAEKEGHNK 476 >gi|24427167|emb|CAD55328.1| ATP-dependent protease ATP-binding subunit [Streptomyces coelicolor A3(2)] Length = 865 Score = 85.6 bits (211), Expect = 3e-15 Identities = 40/190 (21%), Positives = 64/190 (33%), Gaps = 22/190 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ E VQ + A R Sbjct: 334 RFQQVLVAEPTVEDSIA--ILRGLKGRYEAHHKVQIADSALVAAASLSDRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME +I+EL+ V + E + D A E Sbjct: 384 -TSRFLPDKAIDLVDEAASRLRMEIDSSPVEIDELQRSVDRLKMEELAIGKETDAASLER 442 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEELKAQ-ENSQCDFD---PMK 460 T+++ K + S + +EL+ Q E +Q D D K Sbjct: 443 LERLRRDLADKEEELRGLTARWEKEKQSLNRVGELKEKLDELRGQAERAQRDGDFDTASK 502 Query: 461 MRMESEIRGL 470 + + EI L Sbjct: 503 L-LYGEIPDL 511 >gi|47229818|emb|CAG07014.1| unnamed protein product [Tetraodon nigroviridis] Length = 727 Score = 85.2 bits (210), Expect = 3e-15 Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 32/182 (17%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD 298 + E+D +R++ D + + E+I ++ K + L A Sbjct: 535 GMVCPEIDTLRQMLYRGMDTKEAR-EKVLQEIIR-MRVKQEEKLAAA-----------VQ 581 Query: 299 SPSLENGEGGFL-IAPQDACNEIAEVVQDTARKMEVVA---EEKMRMFKK-ARSVLDACD 353 + E F+ +A + E E ++ +++E + E KMR + R + + Sbjct: 582 AKRSLQQELEFVKVAKKGRLREAIEAKRNLRKEIERLRVDWERKMRDMVETCRRLKGELE 641 Query: 354 RELE----DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARRE 404 RE + D+ C L R K QIEEL V+L+QAEAD QL+ + EAR+ Sbjct: 642 RERQLRACDEGCEAERL---RIKYSAQIEELH--VQLQQAEADREQLRQELQQEREARQS 696 Query: 405 AE 406 E Sbjct: 697 LE 698 >gi|23335984|ref|ZP_00121214.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Bifidobacterium longum DJO10A] Length = 894 Score = 84.9 bits (209), Expect = 4e-15 Identities = 34/185 (18%), Positives = 59/185 (31%), Gaps = 39/185 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E V + A R Sbjct: 338 RFQQVFVGEPSVEDTIA--ILRGLKQRYEAHHKVTIGDDALVAAATLSNRYI-------- 387 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R+L DKA A L+ME +I+EL+ V + E + D A +E Sbjct: 388 -SGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELQRKVTRLEMEEMQLKKAEDPASKE- 445 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + KL+ A+ R LKA+ +++ + + Sbjct: 446 --------------------RLGKLQAELADTRE--KLSGLKARWDAEQAGHNKVGDLRA 483 Query: 466 EIRGL 470 ++ L Sbjct: 484 KLDDL 488 >gi|71368674|ref|ZP_00659163.1| AAA ATPase, central region:Clp, N terminal [Nocardioides sp. JS614] Length = 866 Score = 84.9 bits (209), Expect = 5e-15 Identities = 40/191 (20%), Positives = 67/191 (35%), Gaps = 43/191 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E V+ T + A R Sbjct: 337 RFQQVFVGEPSVEDTI--QILRGIQEKYEAHHGVRITDAALVAAATLSDRYI-------- 386 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R+L DKA A + L+ME + +I+ L V + E ++DEA +E Sbjct: 387 -SGRQLPDKAIDLIDEAASRLRMEIESSPEEIDRLRRAVERLKMEEFALAKESDEASKE- 444 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + LR A+ EEL+A E ++ + + + E Sbjct: 445 --------------------RLANLRQDLADHE-----EELRALE-ARWEREKSTLEGEG 478 Query: 466 EIRGLLKGMEM 476 E+R L + M Sbjct: 479 ELRRQLDQLRM 489 >gi|55242025|gb|EAL40845.1| ENSANGP00000028094 [Anopheles gambiae str. PEST] Length = 3059 Score = 84.1 bits (207), Expect = 8e-15 Identities = 28/147 (19%), Positives = 42/147 (28%), Gaps = 28/147 (19%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLC--------MCVICSK-FDFASNTCRWIG 174 R + C L C + G C C C +C K ++ + + Sbjct: 644 RPLICAACLRCKSCGTTNVTKFIGNLPMCTPCFRLRQKGNYCPLCQKCYEDNDFDLKMME 703 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACN-HTSELFGF-VKDVFQH 231 C C W H C + + M + F C C H+S+ +D Sbjct: 704 CGDCRRWVHARCEGLTDEQYNMLSVL-----PENIEFVCKKCAKHSSDSTAHLWRD--AV 756 Query: 232 CAPNWDFEALIKELDFVRKIFRGSEDA 258 A L V K+ S A Sbjct: 757 AAE------FKAGLLSVVKLLSKSRQA 777 >gi|55242024|gb|EAA08123.3| ENSANGP00000002662 [Anopheles gambiae str. PEST] Length = 2963 Score = 84.1 bits (207), Expect = 8e-15 Identities = 28/147 (19%), Positives = 42/147 (28%), Gaps = 28/147 (19%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLC--------MCVICSK-FDFASNTCRWIG 174 R + C L C + G C C C +C K ++ + + Sbjct: 635 RPLICAACLRCKSCGTTNVTKFIGNLPMCTPCFRLRQKGNYCPLCQKCYEDNDFDLKMME 694 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACN-HTSELFGF-VKDVFQH 231 C C W H C + + M + F C C H+S+ +D Sbjct: 695 CGDCRRWVHARCEGLTDEQYNMLSVL-----PENIEFVCKKCAKHSSDSTAHLWRD--AV 747 Query: 232 CAPNWDFEALIKELDFVRKIFRGSEDA 258 A L V K+ S A Sbjct: 748 AAE------FKAGLLSVVKLLSKSRQA 768 >gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 857 Score = 83.7 bits (206), Expect = 9e-15 Identities = 40/169 (23%), Positives = 63/169 (37%), Gaps = 39/169 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ EI VQ T + A R Sbjct: 330 RFQKVLVDEPTVEDTIA--ILRGLKERYEIHHHVQITDPAIVAAATLSHRYI-------- 379 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + L+ME K +++LE + + E Q + DEA R+ Sbjct: 380 -SDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ- 437 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSE-AEERRQYLFEEL-KAQENS 452 + KL A ER EE+ KA++++ Sbjct: 438 --------------------RLAKLDEELTAREREYSELEEVWKAEKSA 466 >gi|54035919|sp|Q9Z6E4|CLPB_STRAL Chaperone clpB Length = 857 Score = 82.9 bits (204), Expect = 2e-14 Identities = 43/209 (20%), Positives = 64/209 (30%), Gaps = 61/209 (29%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E VQ + A R Sbjct: 333 RFQQVLVAEPSVEDSIA--ILRGLKGRYEAHHKVQIADSALVAAATLSDRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME +I+EL+ V + E + D A R+ Sbjct: 383 -TSRFLPDKAIDLVDEAASRLRMEIDSSPLEIDELQRSVDRLKMEELALDRETDPASRQ- 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR---------------------QYLFE 444 + KLR A+ R + + Sbjct: 441 --------------------RLEKLRRDLADRERSCAAHRPWEKEKQSLNRVGELKERLD 480 Query: 445 ELKAQ-ENSQC--DFDPMKMRMESEIRGL 470 EL+ Q E +Q DFD + EI L Sbjct: 481 ELRGQAERAQQHGDFDTASKLLYGEIPTL 509 >gi|54035876|sp|Q8YM56|CLPB2_ANASP Chaperone clpB 2 Length = 872 Score = 81.8 bits (201), Expect = 3e-14 Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 39/182 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + + A R Sbjct: 334 RFQQVYVDQPSVEDTIS--ILRGLKERYEVHHGVKISDSSLVAAATLSSRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A LKME K +++E++ + + E Q ++D A RE Sbjct: 384 -SDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDRKILQLEMEKLSLQKESDAASRE- 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + +L A+ + + L Q S+ D ++ Sbjct: 442 --------------------RLERLEKELADLKEEQR--TLNTQWQSEKDVINKLQSVKE 479 Query: 466 EI 467 EI Sbjct: 480 EI 481 >gi|33151758|ref|NP_873111.1| ATP-dependant Clp protease chain B [Haemophilus ducreyi 35000HP] Length = 856 Score = 81.4 bits (200), Expect = 5e-14 Identities = 41/181 (22%), Positives = 67/181 (37%), Gaps = 39/181 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ EI VQ T + A R Sbjct: 330 RFQKVLVDEPSVEDTIA--ILRGLKERYEIHHHVQITDPAIVAAATLSHRYI-------- 379 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + L+ME K +++LE + + E Q + DEA R+ Sbjct: 380 -SDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEKDEASRQ- 437 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSE-AEERRQYLFEEL-KAQENSQCDFDPMKMRM 463 + KL A+ + EE+ KA++++ +K + Sbjct: 438 --------------------RLAKLDEEMTAKAQEYSALEEVWKAEKSALLGTQHLKTEL 477 Query: 464 E 464 E Sbjct: 478 E 478 >gi|50843466|ref|YP_056693.1| ATP-dependent protease (Clp chaperone) [Propionibacterium acnes KPA171202] Length = 857 Score = 81.4 bits (200), Expect = 5e-14 Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 39/182 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E V+ T + A R Sbjct: 333 RFQQVFVGEPSVEDTIA--ILRGLRERYEAHHKVRITDGALVAAASLSHRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R+L DKA A + L+ME +I+ L V + E + + D A ++ Sbjct: 383 -TARQLPDKAIDLIDEAASRLRMEIDSSPEEIDTLRREVDRMKMEIFAVEKEDDPASQQ- 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR--QYLFEELKAQENSQCDFDPMKMRM 463 + +LR A++ + L +A++ +K R+ Sbjct: 441 --------------------RLTRLRADMADKEETLRGLESRWEAEKAGLNKVGELKTRI 480 Query: 464 ES 465 + Sbjct: 481 DE 482 >gi|885934|gb|AAB09631.1| ClpB Length = 883 Score = 81.0 bits (199), Expect = 7e-14 Identities = 33/177 (18%), Positives = 65/177 (36%), Gaps = 39/177 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V+ + + A R Sbjct: 343 RFQQVFVDQPTVEDTIS--ILRGLKERYEVHHGVRISDNALVAAAVLSTRYI-------- 392 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA + LKME K +++E++ + + E Q ++D A +E Sbjct: 393 -SDRFLPDKAIDLVDESAARLKMEITSKPEELDEIDRKILQLEMERLSLQKESDLASQE- 450 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQENSQCDFDPMK 460 + +L A+ E ++ L + +A+++ D +K Sbjct: 451 --------------------RLQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSVK 487 >gi|32452329|emb|CAD59396.1| putative ClpB1 protein [Propionibacterium freudenreichii subsp. shermanii] Length = 729 Score = 81.0 bits (199), Expect = 7e-14 Identities = 30/182 (16%), Positives = 59/182 (32%), Gaps = 39/182 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E V+ T + A+ R Sbjct: 333 RFQQVYVGEPSVEDTVA--ILRGLRERYEAHHKVRITDSALVAAAQLSHRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R+L DKA A + L+ME +I+ L V E + + D + Sbjct: 383 -TGRQLPDKAIDLVDEAASRLRMEIDSSPEEIDTLRRQVDRLTMEQFAVEKEEDPGSK-- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK--AQENSQCDFDPMKMRM 463 ++ ++ A+ + Q E + A++ +K R+ Sbjct: 440 -------------------ARLARINSDLADAKEQLRGLEARWAAEKEGLNKVGELKTRI 480 Query: 464 ES 465 ++ Sbjct: 481 DA 482 >gi|42631176|ref|ZP_00156714.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Haemophilus influenzae R2866] Length = 856 Score = 80.6 bits (198), Expect = 8e-14 Identities = 38/168 (22%), Positives = 59/168 (35%), Gaps = 38/168 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ EI V T + A R Sbjct: 332 RFQKVFVDEPSVEDTIA--ILRGLKERYEIHHHVDITDPAIVAAATLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++ME K ++ LE + + E Q + DEA R+ Sbjct: 382 -SDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY-LFEELKAQENS 452 + L AE+ R+Y EE+ E + Sbjct: 440 --------------------RLEMLEKELAEKEREYAELEEVWKSEKA 467 >gi|37523146|ref|NP_926523.1| endopeptidase Clp ATP-binding chain B [Gloeobacter violaceus PCC 7421] Length = 872 Score = 79.8 bits (196), Expect = 1e-13 Identities = 32/177 (18%), Positives = 62/177 (35%), Gaps = 39/177 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V+ + + A R Sbjct: 335 RFQQVYVDQPTVEDTIS--ILRGLKERYEVHHGVRISDSALVAAAVLSHRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A LKME K ++E++ + + E ++D A R+ Sbjct: 385 -SDRFLPDKAIDLMDEAAAKLKMEITSKPEALDEVDRKILQLEMERLSLAKESDAASRD- 442 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQENSQCDFDPMK 460 + +L A+ E ++ L + +A+++ +K Sbjct: 443 --------------------RLERLEKELADLKEEQRSLNAQWQAEKDIIDQVQAVK 479 >gi|72384775|gb|AAZ67679.1| chaperone putative [Haemophilus parasuis] Length = 686 Score = 79.8 bits (196), Expect = 1e-13 Identities = 40/169 (23%), Positives = 63/169 (37%), Gaps = 39/169 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ EI VQ T + A R Sbjct: 330 RFQKVLVDEPTVEDTIA--ILRGLKERYEIHHHVQITDPAIVAAATLSHRYI-------- 379 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + L+ME K +++LE + + E Q + DEA R+ Sbjct: 380 -SDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ- 437 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSE-AEERRQYLFEEL-KAQENS 452 + KL A ER EE+ KA++++ Sbjct: 438 --------------------RLAKLDEDLTAREREYAELEEVWKAEKSA 466 >gi|68369072|ref|XP_689552.1| PREDICTED: similar to nuclear oncoprotein [Danio rerio] Length = 265 Score = 79.1 bits (194), Expect = 2e-13 Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 23/158 (14%) Query: 264 FWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLEN-----GEGGFL-IAP 313 + + L + L S L F I M ++ + + +L+ E F+ + Sbjct: 75 CSELELLKQTLSSDLSSKEAREKFLQEIIRMRVKQEEKLAAALQAKRSLQQELEFVRVTK 134 Query: 314 QDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACAVTD 365 + E E ++ +++E + E + + A D R+L+ DK C Sbjct: 135 KGRLREAIEAKRNLRKEIERLRVECEKKVRDASESCDRLKRDLDRERRTRVCDKNCEAGR 194 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 L R K QIE+L+ ++L+QAE D QL+ D + Sbjct: 195 L---RAKYSSQIEDLQ--MKLQQAEVDREQLREDLLKE 227 >gi|29608171|dbj|BAC72226.1| putative ATP-dependent Clp protease [Streptomyces avermitilis MA-4680] Length = 870 Score = 78.7 bits (193), Expect = 3e-13 Identities = 43/191 (22%), Positives = 67/191 (35%), Gaps = 24/191 (12%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E VQ + A R Sbjct: 334 RFQQVLVAEPSVEDTIA--ILRGLKGRYEAHHKVQIADSALVAAAALSDRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+ME +I+EL+ V + E + D A RE Sbjct: 384 -TSRFLPDKAIDLVDEAASRLRMEIDSSPVEIDELQRQVDRLKMEELAIGKETDAASRER 442 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQ-ENSQCDFD---PM 459 T+++ K L+ E ++ +EL+ Q E +Q D D Sbjct: 443 LEKLRRDLADKEEELRGLTARWEKEKQSLNRVGELKE-KLDELRGQAERAQRDGDFDTAS 501 Query: 460 KMRMESEIRGL 470 K+ + EI L Sbjct: 502 KL-LYGEIPAL 511 >gi|26248955|ref|NP_754995.1| ClpB protein [Escherichia coli CFT073] Length = 861 Score = 78.7 bits (193), Expect = 3e-13 Identities = 38/186 (20%), Positives = 70/186 (37%), Gaps = 40/186 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E+ VQ T + A R Sbjct: 336 RFQKVFVAEPSVEDTIA--ILRGLKERYELHHHVQITDPAIVAAATLSHRYI-------- 385 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++M+ K +++ L+ + + E ++DEA ++ Sbjct: 386 -ADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK- 443 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY--LFEELKAQENSQCDFDPMKMRM 463 + L +++ RQY L EE KA++ S +K + Sbjct: 444 --------------------RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAEL 483 Query: 464 E-SEIR 468 E ++I Sbjct: 484 EQAKIA 489 >gi|46156241|ref|ZP_00133175.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Haemophilus somnus 2336] Length = 872 Score = 78.7 bits (193), Expect = 3e-13 Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ EI VQ T + A R Sbjct: 348 RFQKVFVGEPTVEDTIA--ILRGLKERYEIHHHVQITDPAIVAAATLSHRYI-------- 397 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR+L DKA A + ++ME K ++ LE + + E Q + DEA R Sbjct: 398 -SDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDEASR 454 >gi|12722113|gb|AAK03788.1| ClpB [Pasteurella multocida subsp. multocida str. Pm70] Length = 855 Score = 78.7 bits (193), Expect = 3e-13 Identities = 37/182 (20%), Positives = 66/182 (36%), Gaps = 39/182 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ EI VQ T + A R Sbjct: 331 RFQKVFVGEPTVEDTIA--ILRGLKERYEIHHHVQITDPAIVAAATLSHRYV-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++ME K ++ LE + + E Q + D+A R+ Sbjct: 381 -SDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRK- 438 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY-LFEEL-KAQENSQCDFDPMKMRM 463 + L E+ R+Y E++ KA++ + +K + Sbjct: 439 --------------------RLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAEL 478 Query: 464 ES 465 +S Sbjct: 479 DS 480 >gi|28629052|gb|AAO49455.1| heat shock protein 78 [Leptosphaeria maculans] Length = 807 Score = 78.7 bits (193), Expect = 4e-13 Identities = 37/193 (19%), Positives = 71/193 (36%), Gaps = 20/193 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++++ ++ E+ V+ T + A R Sbjct: 269 RFQPIQVGEPTVQDTIS--ILRGIKERYEVHHGVRITDNALVAAASYSNRYI-------- 318 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L+++++ K I+EL+ + Q E + + + D A +E Sbjct: 319 -TDRFLPDKAIDLVDEAASALRLQQESKPDAIQELDRQIMTIQIELESLRKETDIASKER 377 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEELKAQ-ENSQCDFDPMKM-- 461 T K+ K R E + Q E+ + + E ++ + + K Sbjct: 378 RQRLEESLKQKQEEAKGLTEKWEKERAELEEIKNAQENLEKARLELEQARREGNFAKAGE 437 Query: 462 RMESEIRGLLKGM 474 S I L++ + Sbjct: 438 LQYSRIPELIEKL 450 >gi|71675495|ref|ZP_00673240.1| AAA ATPase, central region:Clp, N terminal [Trichodesmium erythraeum IMS101] Length = 870 Score = 78.7 bits (193), Expect = 4e-13 Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + + A R Sbjct: 334 RFQQVYVDQPSVEDAIS--ILRGLKERYEVHHGVKISDSSLVAAATLSTRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A LKME K +++E++ + + E Q ++D A +E Sbjct: 384 -SDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDRKILQLEMEKLSLQKESDTASKE 441 >gi|68538354|ref|ZP_00578132.1| AAA ATPase, central region:Clp, N terminal [Sphingopyxis alaskensis RB2256] Length = 862 Score = 78.3 bits (192), Expect = 4e-13 Identities = 36/186 (19%), Positives = 69/186 (37%), Gaps = 43/186 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ E+ V T + A+ R + Sbjct: 335 RFQPVYIDEPSVEDTIS--ILRGLKEKYELHHGVNITDSAIVAAAQLSDRYIQ------- 385 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 +R L DKA A + ++ME + K +IE L+ + + E ++DEA ++ Sbjct: 386 --NRFLPDKAIDLMDEAASRIRMEVESKPEEIENLDRRIIQLKIEESALAKESDEASKD- 442 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + LR AE E+ ++ ++ + K++ E+ Sbjct: 443 --------------------RLATLRKELAE------LEQKSSELTTRWQNERDKIQAEA 476 Query: 466 EIRGLL 471 +I+ L Sbjct: 477 KIKEQL 482 >gi|74316833|ref|YP_314573.1| ClpB protein [Thiobacillus denitrificans ATCC 25259] Length = 859 Score = 78.3 bits (192), Expect = 4e-13 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 32/185 (17%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V T + AE R Sbjct: 332 RFQKVMVDEPSVESTIA--ILRGLQERYELHHGVDITDPAIVAAAELSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A +KME K +++L+ + + E + + + DEA ++ Sbjct: 382 -TDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDEASKK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + KL A+ + E+ + Q ++ + K+R Sbjct: 440 -------------RLGLLEDEIDKLGREYADLEEVWKSEKAQVQGSAHLKEEIDKLR--G 484 Query: 466 EIRGL 470 E+ L Sbjct: 485 EMADL 489 >gi|62662009|ref|XP_577460.1| PREDICTED: similar to Ski protein [Rattus norvegicus] Length = 357 Score = 78.3 bits (192), Expect = 5e-13 Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 24/164 (14%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFI-----LMFFQECDSDSPSLE-----NGEGGFL 310 L + + L + L L F+ + ++ + + + + + E FL Sbjct: 184 SGLEAELEHLRQALGVGLDTKEAKEKFLXEVVKIQLVKQEEKLTAAQQGKRSLHHELEFL 243 Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACA 362 ++ E+ E +++E + E +M ++ EL + C Sbjct: 244 SVAKEKRQEVTEASCSLKKEIEPLQAENEKM-EETNESWVCLKXELGQARQVRLCENRCK 302 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE 406 L K Q E+ ++ +L+ AEAD QL+AD A E Sbjct: 303 AGHLH---AKYSAQTEDPQA--KLQHAEADHEQLQADVACEHLE 341 >gi|62426046|ref|ZP_00381176.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Brevibacterium linens BL2] Length = 868 Score = 77.9 bits (191), Expect = 5e-13 Identities = 32/171 (18%), Positives = 50/171 (29%), Gaps = 39/171 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ E V + A R Sbjct: 335 RFQQVYVGEPNVEDTVA--ILRGLKERYEAHHKVSINDGALIAAATMSNRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R+L DKA A + L+ME +I+EL V + E + D A E Sbjct: 385 -TGRQLPDKAIDLVDEAASRLRMEIDSAPVEIDELRRAVDRLKMEDMALSKETDTASIE- 442 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDF 456 + LR A+ + L+A SQ Sbjct: 443 --------------------RLGALRADLADREEE--LHGLEATWESQRAG 471 >gi|73541668|ref|YP_296188.1| AAA ATPase, central region:Clp, N terminal [Ralstonia eutropha JMP134] Length = 862 Score = 77.5 bits (190), Expect = 7e-13 Identities = 38/198 (19%), Positives = 68/198 (34%), Gaps = 33/198 (16%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E ++ E+ V+ T + AE R Sbjct: 331 RFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVEITDPAIVAAAELSHRYI-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA---- 401 DR L DKA A +KME K +++LE + E + + + DEA Sbjct: 381 -TDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASLKR 439 Query: 402 ---------RREAEXXXXXXXXXXXXXXXXYT----SKYLKLRLSEAEERRQYLFEELKA 448 R E E T + K++L A+ +R+ +++ Sbjct: 440 LDLIEQEITRLEKEYADLDEIWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVAE 499 Query: 449 QENSQCDFDPMKMRMESE 466 + + K++ ++ Sbjct: 500 LQYGKLPGLEGKLKAATD 517 >gi|67153835|ref|ZP_00415580.1| AAA ATPase, central region:Clp, N terminal [Azotobacter vinelandii AvOP] Length = 946 Score = 77.5 bits (190), Expect = 7e-13 Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 38/172 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS E+ ++ E+ V T + A+ R Sbjct: 424 RFQKVLVDEPSEEDTIA--ILRGLKERYEVHHGVTITDGAIIAAAKLSHRYI-------- 473 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++ME K +++ L+ + + E + + + DEA ++ Sbjct: 474 -TDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKETDEATKK- 531 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL-FEELKAQENSQCDF 456 + KL A+ R+Y EE+ E ++ Sbjct: 532 --------------------RLAKLEEDIAKLEREYADLEEIWKSEKAEVQG 563 >gi|76164358|gb|EAO58508.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chloroflexus aurantiacus J-10-fl] Length = 861 Score = 77.5 bits (190), Expect = 7e-13 Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 28/196 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ E V+ T + A R Sbjct: 334 RFQPVMVDPPSVEDTIS--ILRGLKERYETHHGVRITDGALIAAAMLSDRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A L+ME ++++L+ + + E + + + D+A +E Sbjct: 384 -SDRFLPDKAIDLIDEAAARLRMEITSDPQELDDLKRRIMQLEIEREALRKEKDQASKER 442 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK----AQENSQCDFDPMKM 461 ++ + R ER Q L E+++ A E +Q +D Sbjct: 443 LEKLEQELANLREQRSALEAQIQRERQEL--ERIQQLKEKIEQTRAAIEQAQRQYD---- 496 Query: 462 RMESEIRGLLKGMEMT 477 ++ L G ++ Sbjct: 497 --YNKAAELQYGTLVS 510 >gi|50955821|ref|YP_063109.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 734 Score = 77.5 bits (190), Expect = 7e-13 Identities = 32/163 (19%), Positives = 53/163 (32%), Gaps = 39/163 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E V + A R Sbjct: 206 RFQQVYVGEPSVEDTVA--ILRGLKGRYEAHHGVTIEDSALVAAASLSNRYI-------- 255 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R+L DKA A + LKME +I+ L+ V + E + + D A +E Sbjct: 256 -TARQLPDKAIDLIDEAASRLKMEIDSAPVEIDTLQRQVERIKLEEFALKKEKDAASKE- 313 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 + +LR E++R+ EL+ Sbjct: 314 --------------------RLEQLRQRLGEQQRE--LTELQE 334 >gi|68213889|ref|ZP_00565718.1| AAA ATPase, central region:Clp, N terminal [Methylobacillus flagellatus KT] Length = 861 Score = 76.8 bits (188), Expect = 1e-12 Identities = 39/177 (22%), Positives = 58/177 (32%), Gaps = 44/177 (24%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E ++ E+ V+ T + AE R Sbjct: 332 RFQKVLVDEPSVEATIA--ILRGLQEKYEVHHGVEITDPAIVAAAELSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A +KME K +++LE + + E + + DEA + Sbjct: 382 -TDRFLPDKAIDLIDEAAARIKMEIDSKPEALDKLERRLIQLKIEREAVHREKDEASQ-- 438 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL----FEELKAQENSQCDFDP 458 +L L E E RR EE+ E +Q Sbjct: 439 ----------------------KRLSLIEDEIRRLEKEYADLEEIWKAEKAQVQGSK 473 >gi|56543894|gb|AAV90048.1| ATP-dependent Clp protease [Zymomonas mobilis subsp. mobilis ZM4] Length = 864 Score = 76.8 bits (188), Expect = 1e-12 Identities = 34/178 (19%), Positives = 63/178 (35%), Gaps = 18/178 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E V+ T + A R Sbjct: 335 RFQPVYVGEPTVEDTIS--ILRGLKEKYEAHHGVRITDAALVSAATLSNRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 +R L DKA A + L+ME K +IE L+ + + E + + D+A R+ Sbjct: 385 -TNRFLPDKAIDLVDEAASRLRMEVDSKPEEIENLDRRIIQLKIEREALLKENDDASRDR 443 Query: 406 EXXXXXXXXXXXXXXXXYTSKYL-KLRLSEAEERRQYLFEELK-AQENSQCDFDPMKM 461 T+++ + +AE R + ++ + A E ++ D K Sbjct: 444 LATLEHDLSDLEQQSSELTTRWKNEQDKIKAEARLKEKLDQARIALEQAERSGDLTKA 501 >gi|68528191|gb|EAN51157.1| AAA ATPase, central region:Clp, N terminal [Ralstonia metallidurans CH34] Length = 862 Score = 76.4 bits (187), Expect = 1e-12 Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E ++ E+ V+ T + AE R Sbjct: 331 RFQKVLVDEPSVEATIA--ILRGLQEKYELHHKVEITDPAIVAAAELSHRYI-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A +KME K +++LE + E + + + DEA R Sbjct: 381 -TDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASR 437 >gi|16331048|ref|NP_441776.1| ClpB protein [Synechocystis sp. PCC 6803] Length = 872 Score = 76.4 bits (187), Expect = 1e-12 Identities = 33/177 (18%), Positives = 59/177 (33%), Gaps = 39/177 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQE D P++ + ++ E+ V+ + A R Sbjct: 334 RFQEVLVDEPNVLDTIS--ILRGLKERYEVHHGVKIADSALVAAAMLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A LKME K +++E++ + + E Q + D A +E Sbjct: 384 -SDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDRKILQLEMERLSLQRENDSASKE- 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQENSQCDFDPMK 460 + KL A+ E + L + ++++ +K Sbjct: 442 --------------------RLEKLEKELADFKEEQSKLNGQWQSEKTVIDQIRTVK 478 >gi|58580960|ref|YP_199976.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae KACC10331] Length = 898 Score = 76.4 bits (187), Expect = 2e-12 Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ + V+ T + A R Sbjct: 369 RFQKVFVGEPTVEDTIA--ILRGLKERYAVHHGVEITDPAIVAAATLSNRYI-------- 418 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR+L DKA A + ++ME K +++ LE + + + +M + + D+A R+ Sbjct: 419 -TDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQ 476 >gi|3360502|gb|AAC62621.1| heat shock protein [Plectonema boryanum] Length = 883 Score = 76.4 bits (187), Expect = 2e-12 Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 39/177 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + + A R Sbjct: 345 RFQQVFVDQPSVEDTIS--ILRGLKERYEVHHGVKISDSALVAAATLSTRYI-------- 394 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L KA A LKME K +++E++ V + E Q + D R+ Sbjct: 395 -SDRFLPSKAIDLVDEAAAKLKMEITSKPEELDEVDRKVLQLEMERLSLQKENDAGSRD- 452 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQENSQCDFDPMK 460 + +L A+ E + L + +A+++ D +K Sbjct: 453 --------------------RLERLERELADFKEDQSKLNAQWQAEKSVITDLQKLK 489 >gi|53802726|ref|YP_115493.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Methylococcus capsulatus str. Bath] Length = 859 Score = 76.0 bits (186), Expect = 2e-12 Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V T + A R Sbjct: 332 RFQKVLVDEPTVEDTIA--ILRGLKERYEVHHGVTITDPAIVAAATLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR+L DKA A + ++ME K +++ L+ + + E + + + DEA + Sbjct: 382 -TDRQLPDKAIDLVDEAASRIRMEIDSKPEEMDRLDRRLIQLRIEREALKKETDEASK 438 >gi|75674787|ref|YP_317208.1| AAA ATPase [Nitrobacter winogradskyi Nb-255] Length = 891 Score = 76.0 bits (186), Expect = 2e-12 Identities = 42/189 (22%), Positives = 68/189 (35%), Gaps = 27/189 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E V+ + A R Sbjct: 347 RFQPIFVSEPTVEDTVS--ILRGLKDKYEQHHGVRIADSALVAAATLSHRYI-------- 396 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELES-IVRLKQAEADMFQLKADEARRE 404 DR L DKA A LKM+ K +++ L+ IVRLK E + + ++D R Sbjct: 397 -TDRFLPDKAIDLVDEAAARLKMQVDSKPEELDSLDREIVRLK-IEQEALKKESDAGSRT 454 Query: 405 AEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMR 462 TS++ K +LS+A L EL + ++ + + R Sbjct: 455 RLENLEKELADLEKRSADLTSRWNAEKNKLSDA----ARLKSEL---DQARIELANAQRR 507 Query: 463 MESEIRGLL 471 E +I G L Sbjct: 508 GEYQIAGEL 516 >gi|54294637|ref|YP_127052.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella pneumophila str. Lens] Length = 858 Score = 76.0 bits (186), Expect = 2e-12 Identities = 38/197 (19%), Positives = 66/197 (33%), Gaps = 28/197 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ T + A R Sbjct: 332 RFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVEITDPALVAAATLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++ME K +++LE + + E + + + DEA ++ Sbjct: 382 -SDRQLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKKR 440 Query: 406 EXXXXXXXXXXXXXXXXYTS--KYLKLRLSEA----EERRQYLFEELKAQENSQCDFDPM 459 K K + + E Q E E ++ D Sbjct: 441 LVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLE----METARRAGDLS 496 Query: 460 KM--RMESEIRGLLKGM 474 +M I L K + Sbjct: 497 RMSELQYGRIPELEKRL 513 >gi|22295113|dbj|BAC08941.1| ClpB protein [Thermosynechococcus elongatus BP-1] Length = 871 Score = 76.0 bits (186), Expect = 2e-12 Identities = 38/196 (19%), Positives = 68/196 (34%), Gaps = 42/196 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ EI V+ + + A R Sbjct: 333 RFQQVYVDQPSVEDTIS--ILRGLKERYEIHHGVKISDTALVAAATLSARYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A LKME K +++E++ + + E Q + A R+ Sbjct: 383 -SDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDRKILQLEMERLSLQKETSAASRD- 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQENSQCDFDPMKMRM 463 + KL A+ E + L + +A++ +K + Sbjct: 441 --------------------RLEKLERELADLKEEQSRLNAQWQAEKEVIDRLQSIKEEI 480 Query: 464 ES---EIRGLLKGMEM 476 E EI+ + ++ Sbjct: 481 EKVNIEIQQAERNYDL 496 >gi|75429872|ref|ZP_00732490.1| ATPases with chaperone activity, ATP-binding subunit [Actinobacillus succinogenes 130Z] Length = 636 Score = 75.6 bits (185), Expect = 2e-12 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 39/181 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E+ V+ T + A R Sbjct: 112 RFQKVFVGEPSVEDTIA--ILRGLQERYELHHHVEITDPAIVAAATLSHRYI-------- 161 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++ME K +++LE + + E + + DEA R+ Sbjct: 162 -SDRQLPDKAIDLIDEAASSIRMEIDSKPLPLDKLERRIIQLKLEQQALKKEDDEASRK- 219 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY-LFEEL-KAQENSQCDFDPMKMRM 463 + L AE+ R+Y EE+ K+++ + +K + Sbjct: 220 --------------------RLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAEL 259 Query: 464 E 464 E Sbjct: 260 E 260 >gi|23123825|ref|ZP_00105864.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc punctiforme PCC 73102] Length = 872 Score = 75.6 bits (185), Expect = 3e-12 Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E V+ + + A R Sbjct: 334 RFQQVYVDQPSVEDSIS--ILRGLRERYENHHGVKISDSALVAAAVLSSRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A LKME K +++E++ + + E Q ++D A RE Sbjct: 384 -SDRFLPDKAIDLVDEAAARLKMEITSKPEELDEIDRKILQLEMEKLSLQKESDAASRE 441 >gi|52307890|gb|AAU38390.1| ClpA protein [Mannheimia succiniciproducens MBEL55E] Length = 856 Score = 75.6 bits (185), Expect = 3e-12 Identities = 37/182 (20%), Positives = 68/182 (37%), Gaps = 39/182 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ VQ T + A R Sbjct: 332 RFQKVFVDEPTVEDTIA--ILRGLKERYELHHHVQITDPAIVAAATLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++ME K ++ L+ + + E + + DEA R+ Sbjct: 382 -SDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLDRRIIQLKLEQQALKKEEDEASRK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY-LFEEL-KAQENSQCDFDPMKMRM 463 + L +E+ R+Y EE+ K+++ + +K + Sbjct: 440 --------------------RLDMLEKELSEKEREYAELEEVWKSEKAALSGTQHIKAEL 479 Query: 464 ES 465 ES Sbjct: 480 ES 481 >gi|33639012|emb|CAE08018.1| endopeptidase Clp ATP-binding chain B [Synechococcus sp. WH 8102] Length = 875 Score = 75.2 bits (184), Expect = 3e-12 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++ + ++ E+ V+ + A R Sbjct: 346 RFQQVLVDQPTVPDTIS--ILRGLKERYEVHHGVRIADSALVAAAMLSSRYI-------- 395 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA + LKME K QI+E++ + + E ++D A +E Sbjct: 396 -TDRFLPDKAIDLVDESAARLKMEITSKPEQIDEIDRKILQLEMEKLSLGRESDSASQE 453 >gi|52209532|emb|CAH35485.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243] Length = 876 Score = 74.8 bits (183), Expect = 4e-12 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 16/117 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E ++ E+ V+ T + AE R Sbjct: 343 RFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVEITDPAIVAAAELSHRYI-------- 392 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A + +KME K ++++L+ + + E + + + DEA Sbjct: 393 -TDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEAS 448 >gi|67985293|gb|EAM73247.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Kineococcus radiotolerans SRS30216] Length = 878 Score = 74.8 bits (183), Expect = 5e-12 Identities = 30/155 (19%), Positives = 49/155 (31%), Gaps = 37/155 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+ + G ++ E V + + A R Sbjct: 332 RFQQVFVGEPSVPDTIG--ILRGLRERYEAHHKVAISDAALVAAATLSDRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R+L DKA A + L+ME +I+EL V + E + D A R Sbjct: 382 -SGRQLPDKAIDLVDEAASRLRMEIDSSPVEIDELRRAVDRMRMEELALSKEEDAASR-- 438 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ 440 ++ LR A+++ Q Sbjct: 439 -------------------NRLETLRAQLADKQEQ 454 >gi|33634638|emb|CAE20624.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB [Prochlorococcus marinus str. MIT 9313] Length = 865 Score = 74.8 bits (183), Expect = 5e-12 Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 39/181 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++++ ++ E+ V+ + A R Sbjct: 333 RFQQVLVDQPTVQDTIS--ILRGLKERYEVHHGVRIADNALVAAAVLSSRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA + LKME K +I+E++ + + E ++D +E Sbjct: 383 -ADRFLPDKAIDLMDESAARLKMEITSKPEEIDEIDRKIVQLEMEKLSLGRESDSVSKE- 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQENSQCDFDPMKMRM 463 + KL AE E++ L + + ++ + D +K + Sbjct: 441 --------------------RLEKLERELAELAEQQSALNAQWQQEKGAIDDLSSLKEEI 480 Query: 464 E 464 E Sbjct: 481 E 481 >gi|66870845|gb|EAL98209.1| AAA ATPase, central region:Clp, N terminal [Arthrobacter sp. FB24] Length = 889 Score = 74.5 bits (182), Expect = 6e-12 Identities = 26/119 (21%), Positives = 39/119 (32%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ G ++ E V + A R Sbjct: 333 RFQQVFVGEPSVEDTIG--ILRGLKERYEAHHKVSIADSALVAAATLSNRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R+L DKA A + L+ME +I++L V E + D A E Sbjct: 383 -SGRQLPDKAIDLVDEAASRLRMEIDSAPEEIDQLRRQVDRLTMEELALANEKDAASVE 440 >gi|17428350|emb|CAD15037.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Ralstonia solanacearum] Length = 862 Score = 74.5 bits (182), Expect = 6e-12 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 16/117 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E ++ E+ V+ T + AE R Sbjct: 331 RFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVEITDPAIVAAAELSHRYI-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A +KME K +++L+ + + E + + + DEA Sbjct: 381 -TDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEAS 436 >gi|59711173|ref|YP_203949.1| ClpB protein [Vibrio fischeri ES114] Length = 861 Score = 74.5 bits (182), Expect = 6e-12 Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 39/182 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ EI V+ T + A R Sbjct: 332 RFQKVLVDEPTVEDTVA--ILRGLKERYEIHHHVEITDPAIVAAASLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++ME K +++L+ + + E ++D+A + Sbjct: 382 -SDRQLPDKAIDLIDEAASSIRMEIDSKPESLDKLDRKIIQLKIEQQALVKESDDASLK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY-LFEEL-KAQENSQCDFDPMKMRM 463 + L L ++ R+Y EE+ KA++ + +K + Sbjct: 440 --------------------RLDSLNLELMQKEREYAELEEVWKAEKAALSGTQHIKTEL 479 Query: 464 ES 465 E+ Sbjct: 480 ET 481 >gi|32423740|gb|AAP81264.1| ClpB [Pseudomonas aeruginosa] Length = 854 Score = 74.1 bits (181), Expect = 8e-12 Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 30/168 (17%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS E+ ++ E+ V T + A+ R Sbjct: 332 RFQKVLVDEPSEEDTIA--ILRGLKERYEVHHGVSITDGAIIAAAKLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++ME K +++ L+ + + E + + + DEA R+ Sbjct: 382 -TDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 +KL A+ + E+ + Q ++Q Sbjct: 440 -------------RLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQ 474 >gi|69935649|ref|ZP_00630585.1| AAA ATPase, central region:Clp, N terminal [Paracoccus denitrificans PD1222] Length = 875 Score = 73.7 bits (180), Expect = 1e-11 Identities = 34/187 (18%), Positives = 68/187 (36%), Gaps = 39/187 (20%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + P++E+ ++ E+ V+ + + A R Sbjct: 332 RFQPVMIEEPTVEDTIS--ILRGIKEKYELHHGVRISDAALVAAATLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L+ME K +++ L+ + Q EA+ + + D A ++ Sbjct: 382 -TDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALDRQILQMQIEAEALKKEDDAASQD- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKL--RLSEAEERRQYLFEELKAQENSQCDFDPMKMRM 463 + KL +LSE +E+ + +A+ + +K ++ Sbjct: 440 --------------------RLEKLEKQLSELQEKSATMTARWQAERDKLEGSRNLKEQL 479 Query: 464 ESEIRGL 470 + L Sbjct: 480 DRARAEL 486 >gi|58698222|ref|ZP_00373142.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia endosymbiont of Drosophila ananassae] Length = 866 Score = 73.7 bits (180), Expect = 1e-11 Identities = 39/198 (19%), Positives = 66/198 (33%), Gaps = 25/198 (12%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P+ + ++ E+ ++ T + A R Sbjct: 347 RFQPVFISQPTETDTIS--ILRGLKERYEVHHGIRITDGAIIAAATLSNRYI-------- 396 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR DKA A + +++E K I+ELE V + EA+ + ++DE ++ Sbjct: 397 -TDRFSPDKAIDLIDEAASRVRIEMDSKPEVIDELERKVIQLKIEAEALKKESDENSKQR 455 Query: 406 EXXXXXXXXXXXXXXXXYTSK--YLK---LRLSEAEERRQYLFEELKAQENSQCDFDPMK 460 SK K R+ E E+ +EL+ + S + Sbjct: 456 LKKINEEIENLNSKFADLNSKWQMEKNKIARIQETAEKLDNARKELELAQRSGNLGKAGE 515 Query: 461 MRMESEIRGL---LKGME 475 + M I L LK E Sbjct: 516 L-MYGVIPQLENELKNQE 532 >gi|28199560|ref|NP_779874.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1] Length = 861 Score = 73.3 bits (179), Expect = 1e-11 Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ + V+ T + A R Sbjct: 332 RFQKVFVGEPTVEDTIA--ILRGLKEKYALHHGVEITDPAIVAAATLSNRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR+L DKA A + ++ME K +++ LE + + + +M + + DEA ++ Sbjct: 382 -TDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQ 439 >gi|23128455|ref|ZP_00110302.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc punctiforme PCC 73102] Length = 880 Score = 73.3 bits (179), Expect = 1e-11 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 16/117 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + + A R Sbjct: 342 RFQQVYVDQPSVEDTIS--ILRGLKERYELHHGVKISDSALVAAATLSARYI-------- 391 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A LKME K +++E++ + + E Q + D A Sbjct: 392 -SDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEIDRKILQLEMERLSLQKETDSAS 447 >gi|17982078|gb|AAL51377.1| ATP-DEPENDENT CLP PROTEASE, ATP-BINDING SUBUNIT CLPB [Brucella melitensis 16M] Length = 931 Score = 73.3 bits (179), Expect = 1e-11 Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 18/178 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D P++E+ ++ E V+ + + A R Sbjct: 390 RFQPVFVDEPTVEDTIS--ILRGLKEKYEQHHKVRVSDSALVAAAMLSNRYI-------- 439 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L+M+ K +++E++ + + E + +++ D A ++ Sbjct: 440 -TDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEIDRRIMQLKIEREALKVETDAASKDR 498 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM 461 T+K+ K +L A + ++ L E A +Q + + K Sbjct: 499 LQRIEKELSDLEEESAELTAKWQAEKQKLGLAADLKRQLEEARNALAIAQRNGEFQKA 556 >gi|56750897|ref|YP_171598.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Synechococcus elongatus PCC 6301] Length = 895 Score = 73.3 bits (179), Expect = 1e-11 Identities = 40/191 (20%), Positives = 68/191 (35%), Gaps = 24/191 (12%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E V+ T + A+ R Sbjct: 338 RFQQVYVSQPSVEDTIA--ILRGLKERYEGHHGVKITDGALMAAAKLSHRYI-------- 387 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A LKME K ++E+LE + + E + +A + Sbjct: 388 -SDRFLPDKAIDLIDEASAQLKMEITSKPSELEDLERRLLQLEMEQLSLSGENGQASVHS 446 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + T + + RL++ ++ + L EEL + + + E Sbjct: 447 DRLQQIQTELQ-------TLQEQQARLNQQWQQEKQLLEELGRLQEEEETLRQQVNQAER 499 Query: 466 EIRGLLKGMEM 476 E L KG E+ Sbjct: 500 E-HDLNKGAEL 509 >gi|48861360|ref|ZP_00315262.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Microbulbifer degradans 2-40] Length = 876 Score = 73.3 bits (179), Expect = 1e-11 Identities = 40/222 (18%), Positives = 67/222 (30%), Gaps = 50/222 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P+ E+ ++ E+ V T + A+ R Sbjct: 332 RFQKVQVDEPNEEDTIA--ILRGLKERYEVHHGVNITDSAIIAAAKLSQRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA + + ++ME K ++++LE + + E + + D A +E Sbjct: 382 -TDRQLPDKAIDLIDESASRIRMEIDSKPEEMDKLERRLIQLKIEREAVKKDEDIASKER 440 Query: 406 EXXXXXXXXXXXXXXXXY-----------------TSKYLKLRLSEAEERRQ---YLFEE 445 S K RL RR E Sbjct: 441 LKKIDSQINEIEKSFADLDEIWRAEKAALQGSQEIKSHLEKARLDLEAARRAGDLGRMSE 500 Query: 446 L----------KAQENSQCDFDPMKM----RMESEIRGLLKG 473 L + +Q D MK+ E EI ++ Sbjct: 501 LQYGIIPDLEKQLDMAAQADMHEMKLLRNKVTEEEIAEVVSK 542 >gi|66802530|ref|XP_635137.1| hypothetical protein DDB0183816 [Dictyostelium discoideum] Length = 886 Score = 72.9 bits (178), Expect = 2e-11 Identities = 36/197 (18%), Positives = 69/197 (35%), Gaps = 24/197 (12%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + P++ + ++ E V+ T + V A+ R Sbjct: 332 RFQQVFVNEPTVNDTIS--ILRGLKERYETHHGVRITDNALVVAAQLSHRYI-------- 381 Query: 351 ACDRELEDK-------ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 +R L DK ACA T +++ Q I+ LE + E+ + + D+A + Sbjct: 382 -TNRFLPDKAIDLVDEACANTRVQLNSQ--PEAIDNLERRRLQLEVESAALEKEEDDASK 438 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-QYLFEELK-AQENSQCDFDPMKM 461 + +KY K R + R + E++K +++ +D Sbjct: 439 QRLKAVQEELNQIKDELQPLEAKYQKERSRVDKIRELRKKLEDIKVKLSDAERRYDTSAA 498 Query: 462 RMESE--IRGLLKGMEM 476 I L K +E+ Sbjct: 499 ADYRYFVIPDLEKQIEV 515 >gi|56708764|ref|YP_170660.1| ClpB protein [Francisella tularensis subsp. tularensis Schu 4] Length = 859 Score = 72.9 bits (178), Expect = 2e-11 Identities = 48/277 (17%), Positives = 82/277 (29%), Gaps = 63/277 (22%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLF-WKADELIEKLKSKLIDPLDACNFIL------- 289 + L V K S+ LF + ++ K +DA N + Sbjct: 252 RGDFEERLKSVLKEL--SKQEGNVILFIDELHTMVGA--GKAEGSMDAGNMLKPALARGE 307 Query: 290 -----------------------MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 FQ+ D P++E+ ++ E+ V Sbjct: 308 LKCVGATTLDEYREYVEKDPALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHGVNI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELE 381 T + A R DR+L DKA A + ++ME K ++E L Sbjct: 366 TDSAIVSAATLSHRYI---------TDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLY 416 Query: 382 SIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS--KYLKLRLS----EA 435 + + + + + + D+A ++ K KL++ Sbjct: 417 RRIIQLKMQREQLKKEKDDATKKRLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLK 476 Query: 436 EERRQYLFEELKAQENSQCDFDPMKM--RMESEIRGL 470 EE + FE E Q D KM +I L Sbjct: 477 EELEKAKFE----LEKYQRVGDLSKMAELQYGKIPEL 509 >gi|56479246|ref|YP_160835.1| ClpB protein [Azoarcus sp. EbN1] Length = 860 Score = 72.9 bits (178), Expect = 2e-11 Identities = 46/224 (20%), Positives = 74/224 (33%), Gaps = 52/224 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V T + AE R Sbjct: 332 RFQKVLVDEPSVESTIA--ILRGLQEKYELHHGVDITDPAIVAAAELSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA---- 401 DR L DKA A +KME K +++LE + + E + + + DEA Sbjct: 382 -TDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLERRLIQLKIEQEAVKRETDEASQKR 440 Query: 402 ----RREAEXXXXXXXXXXXXXXXXYTS---------KYLKLRLSEAEERRQYLFEE--- 445 R E + S + LR AE +R+ +++ Sbjct: 441 LVLIRDEIDKLEREYANLDEIWRSEKASVQGSQHIKEEIEALRTQMAEMQRKGQYDKLAE 500 Query: 446 ------------LKAQENSQCDFDPMK-MRME---SEIRGLLKG 473 LKA E++ K +R E EI ++ Sbjct: 501 LQYGKLPQLEAQLKAAESAGSGERKFKLLRTEVGTEEIAEVVSR 544 >gi|68537287|ref|ZP_00577067.1| AAA ATPase, central region:Clp, N terminal [Sphingopyxis alaskensis RB2256] Length = 859 Score = 72.9 bits (178), Expect = 2e-11 Identities = 38/199 (19%), Positives = 67/199 (33%), Gaps = 32/199 (16%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E+ V+ T + A R Sbjct: 335 RFQPVFVGEPTVEDSIS--ILRGIKEKYELHHGVRITDGAIVAAATLSHRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + ++ME + K +IE L+ + + E ++D A ++ Sbjct: 385 -SDRFLPDKAIDLMDEAASRIRMEVESKPEEIETLDRRIIQMKIEEAALGKESDAASKDR 443 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK--------AQENSQCDFD 457 T K+ +AE+ + + ++K A E +Q D Sbjct: 444 LASLQAELANLEQQSAELTQKW------QAEKEKIHAEAKIKEELDAARSALEQAQRAGD 497 Query: 458 PMKM--RMESEIRGLLKGM 474 K I L K + Sbjct: 498 LAKAGELSYGTIPALEKRL 516 >gi|29610907|dbj|BAC74952.1| putative ATP-dependent Clp protease [Streptomyces avermitilis MA-4680] Length = 879 Score = 72.5 bits (177), Expect = 2e-11 Identities = 32/197 (16%), Positives = 63/197 (31%), Gaps = 44/197 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + A R Sbjct: 337 RFQQVLVDEPSVEDTIS--ILRGLRERLEVFHGVKIQDTALVSAATLSHRYI-------- 386 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A L+ E +++E+ V + E ++D A + Sbjct: 387 -TDRFLPDKAIDLVDEACARLRTEIDSMPAELDEITRRVTRLEIEEAALSKESDPASK-- 443 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ--YLFEELKAQENSQCDFDPM---- 459 ++ +LR A+ R + + +A+ + + Sbjct: 444 -------------------TRLEELRRELADLRGEADAKHAQWEAERQAIRRVQELRQEL 484 Query: 460 -KMRMESEIRGLLKGME 475 ++R E+E + Sbjct: 485 EQVRHEAEEAERAYDLN 501 >gi|68189537|gb|EAN04203.1| AAA ATPase, central region:Clp, N terminal [Mesorhizobium sp. BNC1] Length = 891 Score = 72.5 bits (177), Expect = 2e-11 Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 20/194 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + PS+E+ ++ E V+ + + A R Sbjct: 356 RFQPVYVNEPSVEDTIS--ILRGLKEKYEQHHKVRVSDSALVAAANLSNRYI-------- 405 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L+M+ K +++E++ + + E + +++ DEA ++ Sbjct: 406 -TDRFLPDKAIDLVDEAASRLRMQVDSKPEELDEVDRRIMQLKIEREALRVEKDEASKDR 464 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQC--DFDPMKM 461 T+K+ K +L A E ++ L E +Q +F Sbjct: 465 LERLERELAELEEQSANITAKWQAEKQKLGLAAELKKQLDEARNDLAIAQRKGEFQRAGE 524 Query: 462 RMESEIRGLLKGME 475 I L K ++ Sbjct: 525 LAYGRIPELEKKLK 538 >gi|38492939|pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb Length = 854 Score = 72.5 bits (177), Expect = 2e-11 Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 25/172 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D P++E ++ E+ V+ + + A R Sbjct: 323 RFQPVYVDEPTVEETIS--ILRGLKEKYEVHHGVRISDSAIIAAATLSHRYI-------- 372 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 +R L DKA A L+M + +I+ LE + E + + + D +E Sbjct: 373 -TERRLPDKAIDLIDEAAARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQE- 430 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFD 457 T + KLR ER + + +L+ ++ + Sbjct: 431 ------RLKAIEAEIAKLTEEIAKLRAEW--EREREILRKLREAQHRLDEVR 474 >gi|69300937|ref|ZP_00622398.1| AAA ATPase, central region:Clp, N terminal [Silicibacter sp. TM1040] Length = 902 Score = 72.1 bits (176), Expect = 3e-11 Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 43/188 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E+ V+ + A R Sbjct: 362 RFQPVMVTEPTVEDTIS--ILRGIKEKYELHHGVRIADAALVSAATLSNRYI-------- 411 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L+ME K +++ L+ + Q E + +L+ D A ++ Sbjct: 412 -TDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALDRQILQMQIEEEALKLEDDAASKD- 469 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + L+ A+ + + E+ AQ S+ D K+ Sbjct: 470 --------------------RLEHLQKELADLQERSR--EMTAQWQSERD----KLASAR 503 Query: 466 EIRGLLKG 473 +++ L Sbjct: 504 DLKEQLDR 511 >gi|68180177|ref|ZP_00553160.1| AAA ATPase, central region:Clp, N terminal [Jannaschia sp. CCS1] Length = 871 Score = 72.1 bits (176), Expect = 3e-11 Identities = 23/119 (19%), Positives = 48/119 (40%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + P++++ ++ E+ V+ + + + R Sbjct: 332 RFQPLVVEEPTVDDTVS--ILRGIKEKYELHHGVRISDSALVAASNLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A + L+ME K +++ L+ + Q EA+ + ++D A ++ Sbjct: 382 -TDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALDRQILQMQIEAEALKQESDTASKD 439 >gi|74019149|ref|ZP_00689767.1| AAA ATPase, central region:Clp, N terminal [Burkholderia ambifaria AMMD] Length = 865 Score = 71.8 bits (175), Expect = 4e-11 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 16/117 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E ++ E+ V T + AE R Sbjct: 332 RFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVDITDPAIVAAAELSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A + +KME K ++++L+ + + E + + + DEA Sbjct: 382 -TDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEAS 437 >gi|49612793|emb|CAG76243.1| ClpB protein (heat shock protein f84.1) [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 858 Score = 71.8 bits (175), Expect = 4e-11 Identities = 34/181 (18%), Positives = 65/181 (35%), Gaps = 39/181 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ E+ VQ T + A R Sbjct: 332 RFQKVFVAEPTVEDTIA--ILRGLKERYELHHHVQITDPAIVAAAMLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++++ K ++ LE + + E + ++DEA ++ Sbjct: 382 -SDRKLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY--LFEELKAQENSQCDFDPMKMRM 463 + L ++ R+Y EE KA++ S +K + Sbjct: 440 --------------------RLELLSTELDQKEREYSRQDEEWKAEKASLTGTQNIKASL 479 Query: 464 E 464 E Sbjct: 480 E 480 >gi|34497399|ref|NP_901614.1| ATP-dependent Clp protease subunit; heat-shock protein [Chromobacterium violaceum ATCC 12472] Length = 859 Score = 71.8 bits (175), Expect = 4e-11 Identities = 43/192 (22%), Positives = 70/192 (36%), Gaps = 43/192 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ EI V T + AE R Sbjct: 332 RFQKVLVGEPSVEDTIA--ILRGLQEKYEIHHGVDITDPAIVAAAELSQRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + +KME K +++L+ + + E + ++DEA ++ Sbjct: 382 -TDRFLPDKAIDLIDEAASRIKMELDSKPEAMDKLDRRLIQLKIEREAVNKESDEASQK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL-FEEL-KAQENSQCDFDPMKMRM 463 + + AE R+Y EE+ KA++ +Q +K Sbjct: 440 --------------------RLKLIEDEIAELSREYADLEEIWKAEKAAQQGSQSIK--- 476 Query: 464 ESEIRGLLKGME 475 EI L ME Sbjct: 477 -EEIDRLKVDME 487 >gi|13472967|ref|NP_104534.1| endopeptidase Clp ATP-binding chain B, clpB [Mesorhizobium loti MAFF303099] Length = 868 Score = 71.4 bits (174), Expect = 4e-11 Identities = 35/194 (18%), Positives = 70/194 (36%), Gaps = 20/194 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D P++E+ ++ E V+ + + A R Sbjct: 333 RFQPVFVDEPTVEDTVS--ILRGLKEKYEQHHKVRISDSALVAAATLSNRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L+M+ K ++E++ + + E + +++ D+A ++ Sbjct: 383 -ADRFLPDKAIDLVDEAASRLRMQVDSKPEALDEIDRRIMQLKIEREALKVETDDASKDR 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQC--DFDPMKM 461 T+K+ K +L A + ++ L E +Q +F Sbjct: 442 LVRLEKELVGLEEESTEITAKWQAEKQKLGLAADLKKQLDEARNELAIAQRKGEFQRAGE 501 Query: 462 RMESEIRGLLKGME 475 +I L K ++ Sbjct: 502 LAYGKIPELEKKLK 515 >gi|48849033|ref|ZP_00303277.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Novosphingobium aromaticivorans DSM 12444] Length = 859 Score = 71.4 bits (174), Expect = 5e-11 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 43/186 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E+ V+ + A R Sbjct: 335 RFQPVFVGEPTVEDTIS--ILRGIKDKYELHHGVRIADNAIVAAATLSNRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + ++ME + K +IE+L+ + + E + D+A ++ Sbjct: 385 -SDRFLPDKAIDLMDEAASRIRMEVESKPEEIEKLDRRIIQMKIEEMALAKETDQASKD- 442 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + LR A + +Q A+ ++ + K+ E Sbjct: 443 --------------------RLATLREELANQEQQ------SAELTTRWQNERDKIAAEG 476 Query: 466 EIRGLL 471 +++ L Sbjct: 477 KVKEAL 482 >gi|56419334|ref|YP_146652.1| ATP-dependent Clp protease ATP-binding subunit [Geobacillus kaustophilus HTA426] Length = 862 Score = 71.4 bits (174), Expect = 6e-11 Identities = 34/168 (20%), Positives = 56/168 (33%), Gaps = 24/168 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ E+ V+ R + A R Sbjct: 333 RFQQVLVQEPTVEDTIS--ILRGLKERYEVHHGVKIHDRALVAAAVLSDRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A ++ E + +++E+ V + E + DEA RE Sbjct: 383 -SDRFLPDKAIDLVDEACATIRTEMESMPSELDEVMRRVMQLEIEEAALSKETDEASRER 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKL--------RLSEAEERRQYLFEE 445 +++ K RL EA ER + EE Sbjct: 442 LAALQKELADLREKANAMKAQWQKEKEALDRVRRLREALERAKRELEE 489 >gi|67923982|ref|ZP_00517435.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Crocosphaera watsonii WH 8501] Length = 872 Score = 71.0 bits (173), Expect = 6e-11 Identities = 34/180 (18%), Positives = 59/180 (32%), Gaps = 39/180 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQE D P++ + ++ E+ V+ + A R Sbjct: 334 RFQEVLVDEPNVVDTIS--ILRGLKERYEVHHGVKIADTALVAAAMLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA + LKME K +++E + + + E Q + D A RE Sbjct: 384 -SDRFLPDKAIDLVDESAAKLKMEITSKPEELDEADRKILQLEMERLSLQKEVDIASRE- 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEELKAQENSQCDFDPMKMRM 463 + +L A +E + L + +A++ +K M Sbjct: 442 --------------------RLQRLEKELANLKEEQSQLNAQWQAEKEVIDQIRQLKETM 481 >gi|71543204|ref|ZP_00664602.1| AAA ATPase, central region:Clp, N terminal [Syntrophomonas wolfei str. Goettingen] Length = 862 Score = 71.0 bits (173), Expect = 6e-11 Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + PS+E+ ++ E+ V+ + A R Sbjct: 331 RFQPIMVNPPSVEDTIS--ILRGLKERYEVHHGVRIQDSALVAAAVLSDRYI-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A L+ E +++E+ + + EA + DEA RE Sbjct: 381 -SDRFLPDKAIDLMDEAAARLRTEIDSMPAELDEITRRIMQLEIEAAALGKEKDEASRE 438 >gi|27376515|ref|NP_768044.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium japonicum USDA 110] Length = 879 Score = 71.0 bits (173), Expect = 6e-11 Identities = 49/256 (19%), Positives = 80/256 (31%), Gaps = 63/256 (24%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLF-WKADELIEKLKSKLIDPLDACNFIL-- 289 A + L V + GSE LF + LI K +DA N + Sbjct: 249 AGAKYRGEFEERLKAVLQEVTGSEGTFI--LFIDEMHTLIGAGKGD--GAMDASNLLKPA 304 Query: 290 ----------------------------MFFQECDSDSPSLENGEGGFLIAPQDACNEIA 321 FQ PS+E+ ++ E Sbjct: 305 LARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTIS--ILRGLKDKYEQH 362 Query: 322 EVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQ 376 V+ T + A R DR L DKA A LKM+ K + Sbjct: 363 HGVRITDSALVASATLSNRYI---------TDRFLPDKAIDLMDEAAARLKMQVDSKPEE 413 Query: 377 IEELES-IVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLS 433 ++ ++ I+RLK E + + ++D + T+++ K +LS Sbjct: 414 LDSMDREIIRLK-IEQEALKKESDAGSKSRLQTLEKELVELEEKSASLTARWSAEKNKLS 472 Query: 434 EAEERRQYLFEELKAQ 449 +A+ +LKA+ Sbjct: 473 DAQ--------KLKAE 480 >gi|71908340|ref|YP_285927.1| AAA ATPase, central region:Clp, N terminal [Dechloromonas aromatica RCB] Length = 863 Score = 71.0 bits (173), Expect = 7e-11 Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS+E+ ++ E+ V T + AE R Sbjct: 332 RFQKVLVEEPSVESTIA--ILRGLQEKYELHHGVDITDPAIVAAAELSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A +KME K +++L+ + + E + + + DEA + Sbjct: 382 -TDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRIIQLKIEREAVKKEKDEASK 438 >gi|33602268|ref|NP_889828.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica RB50] Length = 865 Score = 71.0 bits (173), Expect = 7e-11 Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 40/189 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P +E+ ++ E+ V+ T + AE R Sbjct: 331 RFQKVLVGEPDVESTIA--ILRGLQERYELHHGVEITDPAIVAAAELSHRYI-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A ++ME K ++ L+ + + E + + + D+A Sbjct: 381 -TDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDAS--- 436 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL-KAQENSQCDFDPMKM--- 461 + KL +R +EE+ KA++ + +K Sbjct: 437 -----------MRRLAVIEEELEKL------QREYNDYEEIWKAEKAAVQGTQAIKEEID 479 Query: 462 RMESEIRGL 470 R+ +E+ L Sbjct: 480 RVRAEMAEL 488 >gi|16125131|ref|NP_419695.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Caulobacter crescentus CB15] Length = 859 Score = 70.6 bits (172), Expect = 8e-11 Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E+ V+ + + A R Sbjct: 332 RFQPVFVSEPTVEDTVS--ILRGLKEKYEVHHGVRISDSAIVAAATLSNRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A + ++M+ K +++E++ + + E + + D A ++ Sbjct: 382 -ADRFLPDKAIDLVDEASSRVRMQIDSKPEELDEIDRRLVQLKIEREALSKETDAASKQ 439 >gi|66043993|ref|YP_233834.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Pseudomonas syringae pv. syringae B728a] Length = 854 Score = 70.6 bits (172), Expect = 8e-11 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 16/116 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS E+ ++ E+ V T + A+ R Sbjct: 332 RFQKVLVDEPSEEDTIA--ILRGLKERYEVHHKVAITDGAIIAAAKLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA 401 DR+L DKA A + ++ME K ++ LE + + EA + + DEA Sbjct: 382 -TDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEA 436 >gi|56679839|gb|AAV96505.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Silicibacter pomeroyi DSS-3] Length = 872 Score = 70.6 bits (172), Expect = 9e-11 Identities = 38/208 (18%), Positives = 65/208 (31%), Gaps = 51/208 (24%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLF-WKADELIEKLKSKLIDPLDACNFIL-- 289 A + L V + +E A LF + L+ KS +DA N I Sbjct: 247 AGAKYRGEFEERLKAV--LTEVTEAAGEIILFIDEMHTLVGAGKSD--GAMDAANLIKPA 302 Query: 290 ----------------------------MFFQECDSDSPSLENGEGGFLIAPQDACNEIA 321 FQ + P++E+ ++ E+ Sbjct: 303 LARGELHCIGATTLDEYRKYVEKDAALARRFQPVLVEEPTVEDTIS--ILRGIKEKYELH 360 Query: 322 EVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQ 376 V + + A R DR L DKA A + L+ME K Sbjct: 361 HGVDISDSALVAAATLSHRYI---------TDRFLPDKAIDLMDEAASRLRMEVDSKPEA 411 Query: 377 IEELESIVRLKQAEADMFQLKADEARRE 404 +++L+ + Q E + + + D A ++ Sbjct: 412 LDQLDRQILQLQIEEEALKKENDAASQD 439 >gi|48783814|ref|ZP_00280195.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Burkholderia fungorum LB400] Length = 865 Score = 70.6 bits (172), Expect = 9e-11 Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 16/117 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E ++ E+ V T + AE R Sbjct: 332 RFQKVLVDEPTVEATIA--ILRGLQEKYELHHGVDITDPAIVAAAELSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A + +KME K +++ L+ + + E + + + DEA Sbjct: 382 -TDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEAS 437 >gi|75824073|ref|ZP_00753540.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Vibrio cholerae RC385] Length = 857 Score = 70.6 bits (172), Expect = 9e-11 Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 39/187 (20%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V+ T + A R Sbjct: 332 RFQKVLVDEPTVEDTIA--ILRGLKERYELHHHVEITDPAIVAAASLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++M+ K +++LE + + E + DEA + Sbjct: 382 -SDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY-LFEEL-KAQENSQCDFDPMKMRM 463 + L E+ R Y EE+ KA++ + +K + Sbjct: 440 --------------------RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAAL 479 Query: 464 ESEIRGL 470 E L Sbjct: 480 EQARMDL 486 >gi|71550106|ref|ZP_00670254.1| AAA ATPase, central region:Clp, N terminal [Nitrosomonas eutropha C71] Length = 863 Score = 70.6 bits (172), Expect = 9e-11 Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P +E ++ E+ V+ T + AE R Sbjct: 332 RFQKVLVDEPGVEATIA--ILRGLQEKYELHHGVEITDPAIVAAAELSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A ++ME+ K +++L+ + + E + + + DEA + Sbjct: 382 -TDRFLPDKAIDLIDEAAARIRMEQDSKPEVMDKLDRRLIQLKIEREAVKKEKDEASK 438 >gi|50084451|ref|YP_045961.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1] Length = 859 Score = 70.6 bits (172), Expect = 1e-10 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + A+ R Sbjct: 329 RFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVKILDSAIIAAAKMSHRYI-------- 378 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR+L DKA A + +KME K ++ LE + + + + + D + Sbjct: 379 -TDRQLPDKAIDLIDEAASRIKMELDSKPEALDRLERRIIQLKMQLEAVKKDEDLGSK 435 >gi|31872394|gb|AAP59445.1| ClpB-like protein [Meiothermus ruber] Length = 854 Score = 70.6 bits (172), Expect = 1e-10 Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 27/200 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PSLE ++ E+ V+ + + A+ R Sbjct: 323 RFQPVFVDEPSLEETVS--ILRGIKEKYEVHHGVRISDPALIAAAQLSHRYI-------- 372 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR-- 403 DR+L DKA A L+M + I+ L + E + + + D + Sbjct: 373 -ADRKLPDKAIDLVDEAAARLRMALESSPESIDALNRRKLQLEIEREALKKETDAESKFR 431 Query: 404 --EAEXXXXXXXXXXXXXXXXY-TSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMK 460 E E + + + +L A++R + +++ E + Sbjct: 432 LGELEKEIADLEEEIRKQQAEWEAEREIMQKLRAAQQRLDEVRTQIEQAERAYDLNKAAP 491 Query: 461 MR------MESEIRGLLKGM 474 +R +E E+ L M Sbjct: 492 LRYGELPKLEQEVNELADRM 511 >gi|17864015|gb|AAL47016.1| ClpB ATP protease [Paracoccidioides brasiliensis] Length = 792 Score = 70.2 bits (171), Expect = 1e-10 Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 18/115 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + A+ R Sbjct: 262 RFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVKILDSAIIAAAKMSHRYI-------- 311 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + +KME K +++LE RL Q + + +K DE Sbjct: 312 -TDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLER--RLIQLKLQLEAVKKDE 363 >gi|39937493|ref|NP_949769.1| endopeptidase Clp: ATP-binding subunit B, clpB [Rhodopseudomonas palustris CGA009] Length = 879 Score = 70.2 bits (171), Expect = 1e-10 Identities = 40/198 (20%), Positives = 65/198 (32%), Gaps = 30/198 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E V+ + R Sbjct: 334 RFQPVFVSEPTVEDTVS--ILRGLKDKYEQHHGVRIADSALVAAVTLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELES-IVRLKQAEADMFQLKADEARRE 404 DR L DKA A LKM+ K +++ ++ IVRLK E + + + D + Sbjct: 384 -TDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDREIVRLK-IEQEALKKETDPGSKA 441 Query: 405 AEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE----NSQCDFDP 458 T ++ K +LS+A Q L EL A N+Q + Sbjct: 442 RLVTLEKELADLEEKSAALTQRWSAEKNKLSDA----QKLKSELDALRIELANAQRRGEY 497 Query: 459 MKM--RMESEIRGLLKGM 474 + I L K + Sbjct: 498 QRAGELAYGRIPELEKKI 515 >gi|46580283|ref|YP_011091.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] Length = 865 Score = 70.2 bits (171), Expect = 1e-10 Identities = 38/265 (14%), Positives = 72/265 (27%), Gaps = 72/265 (27%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFIL--- 289 A + L V K SE R + ++ K +DA N + Sbjct: 252 AGAKYRGEFEERLKAVLKEVEKSEG-RIIMFIDELHTIVGA--GKTDGAMDASNLLKPML 308 Query: 290 ---------------------------MFFQECDSDSPSLENGEGGFLIAPQDACNEIAE 322 FQ D P++E+ ++ E+ Sbjct: 309 ARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPTIEDAIS--ILRGLKERFEVHH 366 Query: 323 VVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQI 377 V+ + + R DR+L DKA A ++ E + Sbjct: 367 GVRISDSAIVEAVTLSHRYI---------TDRQLPDKAIDLIDEAAALIRTEIDSLPADL 417 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE- 436 +E + + E + + + D A RE + +L A+ Sbjct: 418 DEANRKIMQLEIEREALRRETDVASRE---------------------RLERLENELADL 456 Query: 437 -ERRQYLFEELKAQENSQCDFDPMK 460 + L + + ++ S +K Sbjct: 457 RAEQTALLSQWEREKGSIDHVRSIK 481 >gi|56460289|ref|YP_155570.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones [Idiomarina loihiensis L2TR] Length = 857 Score = 70.2 bits (171), Expect = 1e-10 Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 39/163 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + P++E+ ++ E+ V+ T + A R Sbjct: 332 RFQKVLVEEPNVEDTIA--ILRGLKERYELHHSVEITDPAIVAAASLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++M+ K ++ LE + + E Q + D+A ++ Sbjct: 382 -SDRKLPDKAIDLIDEAASSIRMQIDSKPEDLDRLERRIIQLKLERQALQKEKDDASKK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 + L E+ R +EEL+ Sbjct: 440 --------------------RLEILHDELDEQER--KYEELEE 460 >gi|29653454|ref|NP_819146.1| clpB protein [Coxiella burnetii RSA 493] Length = 859 Score = 69.8 bits (170), Expect = 1e-10 Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS E+ ++ E+ V+ T + A R Sbjct: 332 RFQKVLVEEPSTEDAIA--ILRGLKERYEVHHGVEITDPAIIAAATLSQRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A + ++ME K +++ LE + + E + + + DEA + Sbjct: 382 -TDRNLPDKAIDLIDEAASQIRMEMDSKPVELDRLERRLIQLKIEREALKKETDEASK 438 >gi|61102045|ref|ZP_00377499.1| ATP-dependent Clp protease [Erythrobacter litoralis HTCC2594] Length = 859 Score = 69.8 bits (170), Expect = 1e-10 Identities = 40/196 (20%), Positives = 66/196 (33%), Gaps = 24/196 (12%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ E+ V T + A R + Sbjct: 335 RFQSVYIDEPSVEDTIS--ILRGIAEKYELHHGVNITDGALVAAARLSDRYIQ------- 385 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 +R L DKA A + ++ME + K +IE L+ + + E + + D A ++ Sbjct: 386 --NRFLPDKAIDLMDEAASRIRMEVESKPEEIENLDRRIIQLKIEEQALEKETDSASKDR 443 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK----AQENSQCDFDPMKM 461 T+++ R E R EEL E ++ D K Sbjct: 444 LETLRKELSELEQKSSELTTRWQNERDKIQGETRIK--EELDQARIELEQAERSGDLAKA 501 Query: 462 --RMESEIRGLLKGME 475 I L K +E Sbjct: 502 GELSYGRIPELEKKLE 517 >gi|71891969|ref|YP_277699.1| ATP-dependent protease [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 858 Score = 69.8 bits (170), Expect = 2e-10 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 19/132 (14%) Query: 276 SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 SK I+ A + FQ+ PS+E+ ++ E+ V T + A Sbjct: 320 SKYIEKDAA---LERRFQKIFVSEPSVEDTIA--ILRGLKERYELHHNVHITDPAIVAAA 374 Query: 336 EEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAE 390 R DR+L DKA A + ++++ K +++ LE + + E Sbjct: 375 ILSHRYI---------SDRQLPDKAIDLIDEAASSIRIQIDSKPEELDRLERRIIQLKLE 425 Query: 391 ADMFQLKADEAR 402 + ++D+A Sbjct: 426 QQALKKESDDAS 437 >gi|69954129|ref|ZP_00640937.1| AAA ATPase, central region:Clp, N terminal [Shewanella frigidimarina NCIMB 400] Length = 865 Score = 69.8 bits (170), Expect = 2e-10 Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ T + A R Sbjct: 340 RFQKVIVDEPSVEDTIA--ILRGLKERYELHHHVEITDPAIVAAATMSHRYI-------- 389 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR+L DKA A + ++M+ K ++ LE + E ++DEA R Sbjct: 390 -SDRKLPDKAIDLIDEAASSIRMQIDSKPEVLDRLERRAIQLKLEEQALSKESDEASR 446 >gi|58039904|ref|YP_191868.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter oxydans 621H] Length = 866 Score = 69.8 bits (170), Expect = 2e-10 Identities = 37/208 (17%), Positives = 63/208 (30%), Gaps = 51/208 (24%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLF-WKADELIEKLKSKLIDPLDACNFIL-- 289 A + L V K +E LF + L+ +S +DA N I Sbjct: 248 AGAKYRGEFEERLKAVLKEIETAEG--EIILFIDEMHTLVGAGRSD--GAMDASNLIKPE 303 Query: 290 ----------------------------MFFQECDSDSPSLENGEGGFLIAPQDACNEIA 321 FQ PS+ + ++ E+ Sbjct: 304 LARGTLHCVGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTIS--ILRGIKEKYELH 361 Query: 322 EVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQ 376 V+ T + A R DR L DKA A + L+M+ K Sbjct: 362 HGVRITDNAIVAAATLSNRYI---------TDRFLPDKAIDLIDEAASRLRMQIDSKPEA 412 Query: 377 IEELESIVRLKQAEADMFQLKADEARRE 404 ++EL+ + + E + + + D A ++ Sbjct: 413 LDELDRRIIQLKIEREAIRKEDDTASKD 440 >gi|37525237|ref|NP_928581.1| heat shock protein F84.1 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 857 Score = 69.4 bits (169), Expect = 2e-10 Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E+ VQ T + A R Sbjct: 332 RFQKVYVAEPSVEDTIA--ILRGLKERYELHHHVQITDPAIVAAATLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A L+M+ K ++ LE V + E + ++D+A + Sbjct: 382 -SDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASK 438 >gi|67676700|ref|ZP_00473446.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chromohalobacter salexigens DSM 3043] Length = 860 Score = 69.4 bits (169), Expect = 2e-10 Identities = 36/184 (19%), Positives = 64/184 (34%), Gaps = 45/184 (24%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P+ E+ ++ E+ V T + A+ R Sbjct: 332 RFQKVLVDEPNEEDTVA--ILRGLKERYEVHHGVDITDGAIIAAAKLSTRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++ME +++ L+ + + E + + + DEA + Sbjct: 382 -TDRQLPDKAIDLIDEAASRIRMELDSMPEEMDRLDRRLIQLKMEREALKKETDEATK-- 438 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE----ERRQYLFEEL-KAQENSQCDFDPMK 460 +L EA+ ER EE+ KA++ S K Sbjct: 439 ----------------------KRLDSLEAQIESLEREYADLEEVWKAEKASIQGAAQFK 476 Query: 461 MRME 464 +E Sbjct: 477 AELE 480 >gi|33945097|ref|XP_340696.1| heat shock protein 100 [Trypanosoma brucei] Length = 870 Score = 69.4 bits (169), Expect = 2e-10 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 21/185 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 F PS+E ++ E VQ T + V A+ R Sbjct: 331 RFMPVYVTEPSVEECIS--ILRGLKDRYEAHHGVQITDNAVVVAAQLANRYI-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 +R + DKA A +++++ + I+ LE R + EA + + A RE Sbjct: 381 -TNRFMPDKAIDLIDEACANVRVQLSSRPEAIDILERKKRQLEIEAKALERDKEAASRER 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRM 463 SKY + R+ E +E + L E+ E + D KM + Sbjct: 440 LKLVKADIQRVEEELQPLVSKYNDERQRIDELQEMQSRLDEKKNKLERAVRDG---KMDL 496 Query: 464 ESEIR 468 ++++ Sbjct: 497 AADLQ 501 >gi|47573811|ref|ZP_00243848.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rubrivivax gelatinosus PM1] Length = 867 Score = 69.4 bits (169), Expect = 2e-10 Identities = 32/168 (19%), Positives = 56/168 (33%), Gaps = 30/168 (17%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E ++ E+ V+ T + AE R Sbjct: 331 RFQKVLVGEPSVEATIA--ILRGLQEKYEVHHGVEITDPAIVAAAELSHRYI-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A +K+E K ++ L+ + + E + + + DEA ++ Sbjct: 381 -TDRFLPDKAIDLIDEAAAKVKIEIDSKPEVMDRLDRRLIQLKIEREAVRKEKDEASQK- 438 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 KL A+ + E+ AQ ++ Sbjct: 439 -------------RFGLIEEDIAKLEREAADLDEVWKAEKATAQGSAH 473 >gi|26987361|ref|NP_742786.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas putida KT2440] Length = 854 Score = 69.4 bits (169), Expect = 2e-10 Identities = 34/172 (19%), Positives = 60/172 (34%), Gaps = 38/172 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS E+ ++ E+ V T + A+ R Sbjct: 332 RFQKVLVEEPSEEDTIA--ILRGLKERYEVHHKVAITDGAIIAAAKLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++ME K ++ L+ + + E+ + + DEA ++ Sbjct: 382 -TDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELKAQENSQCDF 456 + KL E ER EE+ A E ++ Sbjct: 440 --------------------RLEKLTEEIERLEREYSDLEEIWASEKAEVQG 471 >gi|54310128|ref|YP_131148.1| putative clpB, ATPases with chaperone activity [Photobacterium profundum SS9] Length = 861 Score = 69.4 bits (169), Expect = 2e-10 Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 16/117 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V+ T + A R Sbjct: 336 RFQKVLVDEPTVEDTIA--ILRGLKERYELHHHVEITDPAIVAAARLSHRYV-------- 385 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR+L DKA A + ++M+ K ++ LE + + E ++D A Sbjct: 386 -SDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALSKESDAAS 441 >gi|22124822|ref|NP_668245.1| heat shock protein [Yersinia pestis KIM] Length = 864 Score = 69.1 bits (168), Expect = 3e-10 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ E+ VQ T + A R Sbjct: 339 RFQKVYVAEPTVEDTIA--ILRGLKERYELHHHVQITDPAIVAAATLSHRYI-------- 388 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR+L DKA A + ++M+ K ++ LE + + E + ++D+A + Sbjct: 389 -SDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASK 445 >gi|68209271|ref|ZP_00561312.1| AAA ATPase, central region:Clp, N terminal [Desulfitobacterium hafniense DCB-2] Length = 853 Score = 69.1 bits (168), Expect = 3e-10 Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 42/180 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ +PS+E+ ++ E V+ T + A R Sbjct: 323 RFQPVTVGAPSVEDTIS--ILRGLKERYETHHGVRITDGAIIAAAVLSDRYI-------- 372 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A ++ME ++++++ + + E + + + DE +E Sbjct: 373 -SDRFLPDKAIDLIDEAAARMRMEITSDPYELDQIKRRILQLEIEREALKKEKDEGSKE- 430 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 RL + EE L EE A E + R+ S Sbjct: 431 -------------------------RLEKIEEDLANLKEERSALEAQLQGEREVLTRINS 465 >gi|46202513|ref|ZP_00053096.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Magnetospirillum magnetotacticum MS-1] Length = 698 Score = 68.7 bits (167), Expect = 3e-10 Identities = 31/182 (17%), Positives = 63/182 (34%), Gaps = 39/182 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P +E+ ++ E+ V+ + A R Sbjct: 334 RFQPVFVTEPGVEDTVS--ILRGLKEKYELHHGVRIADGALVSAATLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L+M+ K ++EL+ + + E + + ++D R+ Sbjct: 384 -TDRFLPDKAIDLVDEAASRLRMQIDSKPEALDELDRRIVQLKIEREALKKESDAGSRD- 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEE-LKAQENSQCDFDPMKMRM 463 + K+ + + ER + E +A+++ D +K ++ Sbjct: 442 --------------------RLGKIEVELTQLERESFDMSERWRAEKSQLADSTKVKEQL 481 Query: 464 ES 465 E Sbjct: 482 EE 483 >gi|73667261|ref|YP_303277.1| AAA ATPase, central region:Clp, N terminal [Ehrlichia canis str. Jake] Length = 857 Score = 68.7 bits (167), Expect = 4e-10 Identities = 32/195 (16%), Positives = 64/195 (32%), Gaps = 22/195 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++ + ++ EI ++ + + R Sbjct: 334 RFQPVFISEPTVNDTIS--ILRGLKEKYEIHHGIRIMDSAIIAASTLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + ++E K I+EL+ + + EA + + + E+ ++ Sbjct: 384 -TDRFLPDKAIDLIDEAASRARIEIDSKPEVIDELDRKIIQLKIEAGVLEKENTESSKQR 442 Query: 406 -----EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMK 460 E K L++ E E+ +L+ + S + Sbjct: 443 LVKLNEELDKLNIQAAELNSKWQAEKIKILKMQECAEKLDNARSDLEKAQRSGNLAKAGE 502 Query: 461 MRMESEIRGLLKGME 475 + M I L K ++ Sbjct: 503 L-MYGIIPELEKELK 516 >gi|71482382|ref|ZP_00662075.1| AAA ATPase, central region:Clp, N terminal [Prosthecochloris vibrioformis DSM 265] Length = 442 Score = 68.7 bits (167), Expect = 4e-10 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 16/114 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ EI V+ + AE R Sbjct: 335 RFQTVVVDQPSVEDTVS--ILRGLKEKYEIHHGVRIKDSAIVAAAELSNRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD 399 DR L DKA A + L++E +++ L +R + E + + + D Sbjct: 385 -ADRFLPDKAIDLIDEASSRLRLEIDSSPEELDRLNREIRRLEIEREALKRELD 437 >gi|16331154|ref|NP_441882.1| ClpB protein [Synechocystis sp. PCC 6803] Length = 898 Score = 68.3 bits (166), Expect = 4e-10 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 18/117 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+++ ++ E+ V+ T + A R + Sbjct: 336 RFQQVYVKQPSVDDTIS--ILRGLKEKYEVHHGVKITDSALVAAATLSHRYIQ------- 386 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A LKME K ++E+++ RL Q + + L+ +E R Sbjct: 387 --DRFLPDKAIDLVDEAAARLKMEITSKPVELEDIDR--RLMQLQMEKLSLEGEEKR 439 >gi|22296180|dbj|BAC10004.1| endopeptidase Clp ATP-binding chain B [Thermosynechococcus elongatus BP-1] Length = 887 Score = 68.3 bits (166), Expect = 4e-10 Identities = 45/204 (22%), Positives = 67/204 (32%), Gaps = 38/204 (18%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ EI V+ T + A R Sbjct: 334 RFQQVYIGQPSVEDTIS--ILRGLKDRYEIHHNVKITDSALVAAAMLSDRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA---- 401 DR L DKA A LKME K ++E LE +R + E LK +E+ Sbjct: 384 -SDRYLPDKAIDLVDEAAAKLKMEITTKPAELEALERRLRQLEME--RLSLKQEESLPLS 440 Query: 402 ------------RREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ 449 R EAE + L+ S EE Q +++ Sbjct: 441 QAPLQATRDRLQRIEAEIAQLQPRQQAMQARWQAEKELLERINSLKEEEDQVKL-QIEQA 499 Query: 450 ENSQCDFDPMKM---RMESEIRGL 470 E ++ R+E+ R L Sbjct: 500 ERDYNLNKAAQLKYGRLETLQREL 523 >gi|70732609|ref|YP_262372.1| ClpB protein PA4542 [Pseudomonas fluorescens Pf-5] Length = 854 Score = 68.3 bits (166), Expect = 4e-10 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 16/116 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS E+ ++ E+ V T + A+ R Sbjct: 332 RFQKVLVDEPSEEDTIA--ILRGLKERYEVHHKVAITDGAIIAAAKLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA 401 DR+L DKA A + ++ME K ++ LE + + E+ + + DEA Sbjct: 382 -TDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEA 436 >gi|58584441|ref|YP_198014.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 853 Score = 68.3 bits (166), Expect = 5e-10 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 20/189 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P+ + ++ E+ ++ T + A R Sbjct: 334 RFQPVFISQPTETDTVS--ILRGLKERYEVHHGIRITDGAIIAAAMLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + +++E K I+ELE + + E+++ + + DE ++ Sbjct: 384 -TDRFLPDKAIDLIDEAASRVRIEMDSKPEIIDELERKIVQLKIESEVLKKERDENSKQR 442 Query: 406 EXXXXXXXXXXXXXXXXYTSK--YLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM-- 461 SK K +++ +E + L K E +Q K Sbjct: 443 LKKINEEIENLNSKFTDLNSKWQMEKNKIARIQETAEKLDNARKELELAQRSGKLEKAGE 502 Query: 462 RMESEIRGL 470 M I L Sbjct: 503 LMYGVIPHL 511 >gi|33519653|ref|NP_878485.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone system with DnaK, DnaJ, and GrpE [Candidatus Blochmannia floridanus] Length = 872 Score = 68.3 bits (166), Expect = 5e-10 Identities = 31/181 (17%), Positives = 65/181 (35%), Gaps = 39/181 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++EN ++ E+ V T + A R Sbjct: 334 RFQKIFIIEPNIENTIA--ILRGLKERYELHHNVHITDPAIVAAATLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++++ K ++ L+ + + E + ++DE ++ Sbjct: 384 -SDRQLPDKAIDLIDEAASSIRIQIDSKPEDLDRLDRRIIQLKLECQALKKESDELSKK- 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY--LFEELKAQENSQCDFDPMKMRM 463 + L + +++ ++Y L E K + +S D +K + Sbjct: 442 --------------------RLEILSMELSQKEQEYSVLESEWKRERSSLFDIQNIKSDL 481 Query: 464 E 464 E Sbjct: 482 E 482 >gi|73663109|ref|YP_301890.1| putative ATPase subunit of an ATP-dependent protease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 869 Score = 67.9 bits (165), Expect = 5e-10 Identities = 30/188 (15%), Positives = 72/188 (38%), Gaps = 18/188 (9%) Query: 276 SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ + ++ + + FQ+ + P +E+ ++ E+ V+ + + A Sbjct: 316 NEYREYIEKDSALERRFQKVNVSEPDVEDTIS--ILRGLKERYEVYHGVRIQDKALVAAA 373 Query: 336 EEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAE 390 E R DR L DKA A ++ E +++++ V + E Sbjct: 374 ELSDRYI---------TDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIE 424 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + ++D A ++ S+ K ++++ +E+R L E KA Sbjct: 425 ESALKNESDNASKQRLQELQQELSNEKEKQNAIQSRVEEEKGKIAKLQEKRTELDESRKA 484 Query: 449 QENSQCDF 456 E+++ ++ Sbjct: 485 LEDAENNY 492 >gi|48763004|ref|ZP_00267561.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rhodospirillum rubrum] Length = 870 Score = 67.9 bits (165), Expect = 5e-10 Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P + + ++ E+ V+ + A R Sbjct: 332 RFQPVFVSEPGVADTIS--ILRGIKEKYELHHGVRIADNALVAAATLSNRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A + L+ME K ++EL+ + + E + + + D A Sbjct: 382 -TDRFLPDKAIDLMDEAASRLRMEVDSKPEALDELDRRIIQLKIEREALRKEKDIASE 438 >gi|75853631|ref|ZP_00761428.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Vibrio sp. Ex25] Length = 857 Score = 67.9 bits (165), Expect = 6e-10 Identities = 37/199 (18%), Positives = 69/199 (34%), Gaps = 47/199 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V+ T + A R Sbjct: 332 RFQKVLVDEPTVEDTVA--ILRGLKERYELHHHVEITDPAIVAAASLSHRYV-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A + ++++ K +++LE + + E + DEA + Sbjct: 382 -SDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK- 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY-LFEELKAQENS--------QCDF 456 + L E+ R+Y EE+ E + + + Sbjct: 440 --------------------RLKALNEELNEKEREYAELEEVWNTEKAALSGTQHIKSEL 479 Query: 457 DPMKMRME-SEIRGLLKGM 474 + +M ME + G L M Sbjct: 480 EQARMDMEFARRAGDLNRM 498 >gi|67921632|ref|ZP_00515150.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Crocosphaera watsonii WH 8501] Length = 887 Score = 67.9 bits (165), Expect = 6e-10 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 18/117 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+++ ++ E+ V+ T + A R Sbjct: 335 RFQQVYVKQPSVDDTIS--ILRGLKERYEVHHGVKITDSALVAAATLSNRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A LKME K ++E+++ RL Q + + L+ +E R Sbjct: 385 -TDRFLPDKAIDLVDEAAAKLKMEITSKPVELEDVDR--RLMQLQMEKLSLEGEEER 438 >gi|8575704|gb|AAF78058.1| ClpB protease [secondary endosymbiont of Glycaspis brimblecombei] Length = 857 Score = 67.9 bits (165), Expect = 6e-10 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ E+ VQ T + A R Sbjct: 332 RFQKVYVAEPTVEDTIA--ILRGLKERYELHHHVQITDPAIVAAASLSNRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A L+M+ K ++ LE V + E + ++D+A + Sbjct: 382 -SDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVTQLKLEQQALKKESDDASK 438 >gi|27360063|gb|AAO09001.1| ClpB protein [Vibrio vulnificus CMCP6] Length = 857 Score = 67.9 bits (165), Expect = 6e-10 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V+ T + A R Sbjct: 332 RFQKVLVDEPTVEDTIA--ILRGLKERYELHHHVEITDPAIVAAASLSHRYV-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR+L DKA A + ++M+ K +++LE + + E + DEA Sbjct: 382 -SDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASE 438 >gi|15159084|gb|AAK89256.1| AGR_L_1346p [Agrobacterium tumefaciens str. C58] Length = 887 Score = 67.5 bits (164), Expect = 7e-10 Identities = 35/174 (20%), Positives = 65/174 (37%), Gaps = 22/174 (12%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D P++E+ ++ E V+ + + A R Sbjct: 346 RFQPVLVDEPNVEDTIS--ILRGLKEKYEQHHKVRISDSALVAAATLSNRYI-------- 395 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L+M+ K +++EL+ + + E + + + D++ + Sbjct: 396 -TDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRIIQLKIEREALKQETDQSSVDR 454 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE---ELK-AQENSQ 453 T+++ K +L A + ++ L E EL AQ N Q Sbjct: 455 LRKLEDELADTEEKADALTARWQAEKQKLGHAADLKKRLDEARNELAIAQRNGQ 508 >gi|71547803|ref|ZP_00668357.1| AAA ATPase, central region:Clp, N terminal [Syntrophobacter fumaroxidans MPOB] Length = 873 Score = 67.5 bits (164), Expect = 7e-10 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D P++E+ ++ E+ V+ + A R Sbjct: 337 RFQPVLVDQPTVEDTIS--ILRGLKERYEVHHGVKIQDSALVAAAVLSGRYI-------- 386 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A ++ E + +++E+ V + E + + D+A +E Sbjct: 387 -TDRFLPDKAIDLVDEACAMIRTEIDSRPEELDEVMRRVMQLEIEEVALKKEKDKASQE 444 >gi|67907151|ref|ZP_00505556.1| AAA ATPase, central region:Clp, N terminal [Polaromonas sp. JS666] Length = 866 Score = 67.5 bits (164), Expect = 7e-10 Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 16/117 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E ++ E+ VQ T + AE R Sbjct: 330 RFQKILVDEPTVEATIA--ILRGLQEKYEVHHGVQITDPAIVAAAELSHRYI-------- 379 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A +K+E K ++ L+ + Q E + + + DEA Sbjct: 380 -TDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEAS 435 >gi|399265|sp|P17422|CLPB_BACNO Chaperone clpB Length = 860 Score = 67.5 bits (164), Expect = 8e-10 Identities = 32/201 (15%), Positives = 66/201 (32%), Gaps = 45/201 (22%) Query: 282 LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRM 341 ++ + FQ+ D PS+E+ ++ E+ + T + A+ R Sbjct: 327 MEKDAALERRFQKVIVDEPSVEDTIA--ILRNLQERYEVHHGINITDPALVAAAQLSHRY 384 Query: 342 FKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL 396 R+L DKA A ++ME K +++++ + Q E + Sbjct: 385 I---------SGRKLPDKAIDLMDEAAAQIRMELDSKPEVMDKIDRRLIQLQIERMALEK 435 Query: 397 KADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL-FEELKAQENSQCD 455 + D A + + L A + ++Y EE+ E + Sbjct: 436 ETDAASK---------------------RRLSDLEAEIAAQEKEYADLEEIWLAEKAGNA 474 Query: 456 FDPMKMRMESEIRGLLKGMEM 476 +EI+ L + + Sbjct: 475 G-------AAEIKEQLDKLRV 488 >gi|21204024|dbj|BAB94722.1| clpB [Staphylococcus aureus subsp. aureus MW2] Length = 869 Score = 67.1 bits (163), Expect = 9e-10 Identities = 36/211 (17%), Positives = 78/211 (36%), Gaps = 27/211 (12%) Query: 276 SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ + ++ + + FQ+ P +E+ ++ E+ V+ R + A Sbjct: 316 NEYREYIEKDSALERRFQKVAVSEPDVEDTIS--ILRGLKERYEVYHGVRIQDRALVAAA 373 Query: 336 EEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAE 390 E R DR L DKA A ++ E +++++ V + E Sbjct: 374 ELSDRYI---------TDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIE 424 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + ++D A ++ S+ K +++ +E+R L E +A Sbjct: 425 ESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQA 484 Query: 449 QENSQCDFDPMKM---------RMESEIRGL 470 E++Q + + K ++E E+R L Sbjct: 485 LEDAQTNNNLEKAAELQYGTIPQLEKELREL 515 >gi|24375079|ref|NP_719122.1| clpB protein [Shewanella oneidensis MR-1] Length = 857 Score = 67.1 bits (163), Expect = 9e-10 Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ T + A R Sbjct: 332 RFQKVLVDEPSVEDTIA--ILRGLKERYELHHHVEITDPAIVAAATMSHRYV-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR+L DKA A + ++M+ K ++ LE + E + DEA R Sbjct: 382 -SDRKLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASR 438 >gi|6458777|gb|AAF10620.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Deinococcus radiodurans] Length = 875 Score = 67.1 bits (163), Expect = 9e-10 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 19/182 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ ++ V+ T + A R Sbjct: 346 RFQPVFVDEPSVEDTIS--ILRGIKERYQVHHNVEITDPALVAAATLSNRYI-------- 395 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA + L+M + +I++L + E + + + D + Sbjct: 396 -TDRQLPDKAIDLIDESAARLRMALESSPERIDQLSRRKLQLEIEREALKREKDVDSQNR 454 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER-RQYLFEELKAQ-ENSQCDFD-PMKMR 462 S++ R A R ++ + ++ Q E ++ D+D R Sbjct: 455 LLDIENQLKTLTDELNEVRSRWEAERGEVAALREKREKLDAVRTQIEKARRDYDLEEAAR 514 Query: 463 ME 464 +E Sbjct: 515 LE 516 >gi|66782797|gb|EAL83760.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Deinococcus geothermalis DSM 11300] Length = 861 Score = 67.1 bits (163), Expect = 9e-10 Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 18/174 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ + V T + A+ R Sbjct: 332 RFQPVFVDEPSVEDTIS--ILRGIKEKYQAHHNVNLTDPALVAAAQLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A L+M + +I++LE + E + + + D + Sbjct: 382 -TDRQLPDKAIDLIDEAAARLRMALESSPERIDQLERRKLQLEIEREALKKEKDVDSQNR 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELKAQ-ENSQCDFD 457 S++ R +A ++ ++++ + E ++ ++D Sbjct: 441 LLDIEDQLKAITDELAEVRSRWEAERQEVQALREKRDQLDQVRTEIEKARREYD 494 >gi|18145090|dbj|BAB81134.1| clpB protein [Clostridium perfringens str. 13] Length = 866 Score = 67.1 bits (163), Expect = 1e-09 Identities = 48/304 (15%), Positives = 86/304 (28%), Gaps = 75/304 (24%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLF--WKADELIEKLKSKLIDPLDACNFIL- 289 A + L V K + SE GK L + ++ K +DA N I Sbjct: 252 AGAKYRGEFEERLKAVLKEVQSSE---GKILLFIDEIHTIVGA--GKTDGAMDAGNLIKP 306 Query: 290 -----------------------------MFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 FQ + P++E ++ EI Sbjct: 307 MLARGELHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETVS--ILRGLKERFEI 364 Query: 321 AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKP 375 ++ + A+ R + DR L DKA A ++ E Sbjct: 365 HHGIRIHDSAIVAAAKLSHRYIQ---------DRYLPDKAIDLIDEAGAMIRSEIDSLPT 415 Query: 376 QIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLK------ 429 +++ + + + + E + + D+A +E T KY K Sbjct: 416 ELDIIRRKILMLETEKEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHIS 475 Query: 430 ----LRLSEAEER-------RQYLFEELKAQENSQ-----CDFDPMKMRMESEIRGLLKG 473 L+ E R R+Y ++ + + + ME + L Sbjct: 476 AVRDLKAELDEARGLAEKYEREYDLNKVAELKYGKIPELERKIKEQEASMEKDNENALLK 535 Query: 474 MEMT 477 E+T Sbjct: 536 EEVT 539 >gi|69945234|ref|ZP_00636365.1| AAA ATPase, central region:Clp, N terminal [Shewanella denitrificans OS-217] Length = 862 Score = 67.1 bits (163), Expect = 1e-09 Identities = 25/118 (21%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS+E+ ++ E+ V+ T + A R Sbjct: 332 RFQKVLVNEPSVEDTIA--ILRGLKERYELHHHVEITDPAIVAAASMSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR+L DKA A + ++M+ K ++ LE + E + D+A R Sbjct: 382 -SDRKLPDKAIDLIDEAASSIRMQIDSKPEVLDRLERRAIQLKLEEQALSKETDDASR 438 >gi|70726976|ref|YP_253890.1| hypothetical protein SH1975 [Staphylococcus haemolyticus JCSC1435] Length = 869 Score = 66.7 bits (162), Expect = 1e-09 Identities = 30/188 (15%), Positives = 67/188 (35%), Gaps = 18/188 (9%) Query: 276 SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ + ++ + + FQ+ P +E+ ++ E+ V+ R + A Sbjct: 316 NEYREYIEKDSALERRFQKVGVSEPDVEDTIS--ILRGLKERYEVYHGVRIQDRALVAAA 373 Query: 336 EEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAE 390 E R DR L DKA A ++ E +++++ V + E Sbjct: 374 ELSDRYI---------TDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIE 424 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + ++D A + S+ K +++ +E+R L +A Sbjct: 425 ESALKNESDNASKHRLEELQEELSNEKEKQASLQSRVEQEKEKIANVQEKRAELDRSRQA 484 Query: 449 QENSQCDF 456 E++Q + Sbjct: 485 LEDAQTEG 492 >gi|42544975|gb|EAA67818.1| conserved hypothetical protein [Gibberella zeae PH-1] Length = 776 Score = 66.4 bits (161), Expect = 2e-09 Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 21/190 (11%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ PS+E+ ++ E+ V+ T + A R Sbjct: 225 EKDVALARRFQPIIVSEPSVEDTIS--ILRGIKDKYEVHHGVRITDGALVAAATLSNRYI 282 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A + LK++ + K I L+ + Q E + + + Sbjct: 283 ---------TDRFLPDKAIDLMDEAASHLKLQHESKPEDIMRLDHKIMTIQIELESLRKE 333 Query: 398 ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELK-AQENSQCD 455 +D A +E +++ K R E+ ++ Q ++ K A E +Q + Sbjct: 334 SDVASKERREKLENDLKKLNEEISGLNARWEKERAEIESVKKIQEDLDKAKFALEQAQRE 393 Query: 456 ---FDPMKMR 462 ++R Sbjct: 394 GNFGRASELR 403 >gi|28210275|ref|NP_781219.1| clpB protein [Clostridium tetani E88] Length = 865 Score = 66.4 bits (161), Expect = 2e-09 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 18/186 (9%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ D P++E+ +I EI ++ + A+ R Sbjct: 328 EKDKALERRFQPVIIDEPTVEDTIS--IIRGLKERFEIHHGIRIHDSAIVAAAKLSQRYI 385 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A ++ E +++ ++ + + E + + Sbjct: 386 ---------TDRYLPDKAIDLIDEAGAMIRTEIDSLPTELDSIKRKIFQMEIEKEALAKE 436 Query: 398 ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-QYLFEELKAQ-ENSQCD 455 D +E T+KY K + R + +E+K Q E ++ + Sbjct: 437 KDSRSKERLEDLEKELSNLKEKDKEMTAKYEKEKEQIINMRNLKQKLDEVKGQLEKAERE 496 Query: 456 FDPMKM 461 +D K+ Sbjct: 497 YDLNKV 502 >gi|32446255|emb|CAD76084.1| ClpB protein [Rhodopirellula baltica SH 1] Length = 899 Score = 66.4 bits (161), Expect = 2e-09 Identities = 37/209 (17%), Positives = 68/209 (32%), Gaps = 49/209 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E V+ T + A R Sbjct: 351 RFQPVFVGEPNVEDTVA--ILRGLKPRYESHHGVRITDSALVAAANLSDRYI-------- 400 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK------------------ 387 DR L DKA A + L ME++ I+ L+ +R Sbjct: 401 -ADRFLPDKAIDLIDEAASRLAMEKESVPEPIDRLQRRLRQLELVHRQLVDEQEASAVDK 459 Query: 388 --QAEADMFQLKADEARR----EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY 441 + E +M KA+ A E E ++ +L +A+ + + Sbjct: 460 RVEVEEEMESAKAELASLKEQWETEKMGLDDVQSVRQEVDQLQHRFAQL---DADAKEKQ 516 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGL 470 L E+ + + M ++++S +R L Sbjct: 517 L-----RGESPEDAYSEM-LQVQSRLREL 539 >gi|23474967|ref|ZP_00130258.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Desulfovibrio desulfuricans G20] Length = 863 Score = 66.0 bits (160), Expect = 2e-09 Identities = 30/177 (16%), Positives = 56/177 (31%), Gaps = 39/177 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D P++E+ ++ E+ V+ + + R Sbjct: 337 RFQPLVVDEPTVEDTIS--ILRGLKERFEVHHGVRISDSALVEAVTLSNRYI-------- 386 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A ++ E +++E + + E + + + D A RE Sbjct: 387 -ADRQLPDKAIDLIDEAAALIRTEIDSLPAELDEANRKIMQLEIEREALRRETDAASRE- 444 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY--LFEELKAQENSQCDFDPMK 460 + KL AE R L + + ++ S +K Sbjct: 445 --------------------RLQKLENELAELREVQAGLNTQWEREKGSIDSVRALK 481 >gi|32422771|ref|XP_331829.1| hypothetical protein [Neurospora crassa] Length = 810 Score = 66.0 bits (160), Expect = 2e-09 Identities = 31/190 (16%), Positives = 63/190 (33%), Gaps = 21/190 (11%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ P++E+ ++ E+ V+ T + A R Sbjct: 250 EKDVALARRFQPIIVSEPTVEDTIS--ILRGIKEKYEVHHGVRITDGALVAAATYSNRYI 307 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A + L+++++ K I+ L+ + Q E + + + Sbjct: 308 ---------TDRFLPDKAIDLMDEAASSLRLQQESKPDDIQRLDQKIMTIQIELESLRKE 358 Query: 398 ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-----EAEERRQYLFEELKAQENS 452 D A E T ++LK + + + EL+ + + Sbjct: 359 KDVASVERREKLEADLKKYQDEVAVLTERWLKEKAEIDSIKQTQAELDRARIELEQAQRT 418 Query: 453 QCDFDPMKMR 462 ++R Sbjct: 419 GNFARASELR 428 >gi|66854676|ref|ZP_00398756.1| AAA ATPase, central region:Clp, N terminal [Anaeromyxobacter dehalogenans 2CP-C] Length = 927 Score = 66.0 bits (160), Expect = 2e-09 Identities = 24/143 (16%), Positives = 48/143 (33%), Gaps = 16/143 (11%) Query: 266 KADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + ++ ++ + FQ PSL + ++ E+ V+ Sbjct: 362 ELHAVGATTVNEYRKHIEKDPALERRFQPVFVGEPSLTDTIS--ILRGLKDRYELHHKVR 419 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEEL 380 + A R DR L DKA A + L++E +++E+ Sbjct: 420 IQDAALVEAARLSSRYI---------TDRFLPDKAIDLVDEAASRLRIEIDSMPTEVDEV 470 Query: 381 ESIVRLKQAEADMFQLKADEARR 403 + + E + + DEA R Sbjct: 471 RRRIGQLEIERQGLRKEQDEASR 493 >gi|72381856|ref|YP_291211.1| ATPase [Prochlorococcus marinus str. NATL2A] Length = 863 Score = 65.6 bits (159), Expect = 3e-09 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+++ ++ E+ V+ + + A R + Sbjct: 333 RFQQILVKQPSVQDTIS--ILRGLKERYEVHHGVRISDNALIAAAILSDRYIPE------ 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R L DKA + + LKME K +I+E++ + + E + ++D + +E Sbjct: 385 ---RFLPDKAIDLIDESASRLKMEITSKPEEIDEIDRKIIQLEMEKLSLEGESDTSSKE 440 >gi|33861137|ref|NP_892698.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 860 Score = 65.6 bits (159), Expect = 3e-09 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 28/179 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ ++PS+++ ++ E+ V+ + + A R Sbjct: 330 RFQKIKINAPSVDDTIS--ILRGLREKYEVHHSVRISDNALVAAASLSERYIN------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L M K +I+E++ V + E Q ++D E Sbjct: 381 --DRFLPDKAIDLIDEAASRLNMIITSKPEEIDEIDRKVLQLEMENLSLQRESDNFSLER 438 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRME 464 LK+R SE + Q EE+ N + + + ++++E Sbjct: 439 LKRINNELHD------------LKIRQSELNHQWQKEKEEIDEISNLKEEIESTQLKIE 485 >gi|50876799|emb|CAG36639.1| probable heat shock protein ClpB [Desulfotalea psychrophila LSv54] Length = 868 Score = 65.6 bits (159), Expect = 3e-09 Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PS+E+ ++ EI V+ R Sbjct: 334 RFQPVLVQEPSVEDTVA--ILRGIKEKYEIHHGVRIQDAATVAAVTLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A + L++E +I++L+ + E + + + D A Sbjct: 384 -ADRFLPDKAIDLIDEAASQLRIEIDSMPTEIDQLQRKCMKLEIEQEALKKEKDSASI 440 >gi|33240532|ref|NP_875474.1| ATPase with chaperone activity ATP-binding subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 864 Score = 65.6 bits (159), Expect = 3e-09 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E+ V+ + + A R + Sbjct: 333 RFQQVLISEPSIEDTIS--ILRGLKEKYEVHHGVRISDSALVAAAVLSNRYISE------ 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R L DKA + + LKME K +++E++ + Q E + +++ A +E Sbjct: 385 ---RYLPDKAIDLIDESASKLKMEITSKPEELDEIDRKIIQLQMEKLSLKRESNLASQE 440 >gi|68171311|ref|ZP_00544710.1| AAA ATPase, central region:Clp, N terminal [Ehrlichia chaffeensis str. Sapulpa] Length = 857 Score = 65.6 bits (159), Expect = 3e-09 Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 22/195 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ ++ + ++ E+ ++ + + R Sbjct: 334 RFQPVFVSESTVNDTIS--ILRGLKEKYEVHHGIRIMDSAIIAASTLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE- 404 DR L DKA A + +++E K I+EL+ + + EA + + + E+ ++ Sbjct: 384 -TDRFLPDKAIDLIDEAASRVRIEIDSKPEVIDELDRKIIQLKIEAGVLEKENTESSKQR 442 Query: 405 ----AEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMK 460 +E K L++ E E+ +L+ + S + Sbjct: 443 LAQLSEELNKLSIQATELNSKWQAEKMKILKMQECVEKLDNARNDLEKAQRSGNLAKAGE 502 Query: 461 MRMESEIRGLLKGME 475 + M I L K ++ Sbjct: 503 L-MYGIIPELEKELK 516 >gi|74022612|ref|ZP_00693193.1| AAA ATPase, central region:Clp, N terminal [Rhodoferax ferrireducens DSM 15236] Length = 870 Score = 65.6 bits (159), Expect = 3e-09 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 16/117 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ A E VQ T + AE R Sbjct: 330 RFQKILVGEPTVEDTIA--ILRGLQAKYETHHGVQITDPAIVAAAELSHRYI-------- 379 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A + +K+E K +++L+ + Q E + + + DEA Sbjct: 380 -TDRFLPDKAIDLIDEAASKIKIELDSKPEVMDKLDRRLIQLQIEREAVRREKDEAS 435 >gi|69927725|ref|ZP_00624886.1| AAA ATPase, central region:Clp, N terminal [Nitrobacter hamburgensis X14] Length = 878 Score = 65.6 bits (159), Expect = 3e-09 Identities = 42/197 (21%), Positives = 65/197 (32%), Gaps = 26/197 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E V+ + A R Sbjct: 334 RFQPIFVSEPTVEDTIS--ILRGLKDKYEQHHGVRIADAALVAAATLSHRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELES-IVRLKQAEADMFQLKADEARRE 404 DR L DKA A LKM+ K +++ L+ IVRL+ E + + + D R Sbjct: 384 -TDRFLPDKAIDLVDEAAARLKMQVDSKPEELDSLDREIVRLR-IEQEALKKENDAGSRM 441 Query: 405 AEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEA----EERRQYLFEELKAQENSQCDFDP 458 TS++ K +LS+A E Q E AQ ++ Sbjct: 442 RLENLEKELVDLEKQSADLTSRWNAEKGKLSDAARLKSELDQARIELANAQRRG--EYQK 499 Query: 459 MKMRMESEIRGLLKGME 475 I L K +E Sbjct: 500 AGELAYGRIPELEKRLE 516 >gi|57866505|ref|YP_188155.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Staphylococcus epidermidis RP62A] Length = 869 Score = 65.2 bits (158), Expect = 3e-09 Identities = 29/188 (15%), Positives = 67/188 (35%), Gaps = 18/188 (9%) Query: 276 SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ + ++ + + FQ+ P +E+ ++ E+ V+ R + A Sbjct: 316 NEYREYIEKDSALERRFQKVGVSEPDVEDTIS--ILRGLKERYEVYHGVRIQDRALVAAA 373 Query: 336 EEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAE 390 E R DR L DKA A ++ E +++++ V + E Sbjct: 374 ELSDRYI---------TDRFLPDKAIDLVDQACATIRTEMGSNPTELDQVNRRVMQLEIE 424 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + ++D + S+ K ++++ +E+R L +A Sbjct: 425 ESALKNESDNPSKHRLEELQEELSNEKEKQSSLKSRVEQEKEKIAKVQEKRAELDSSRQA 484 Query: 449 QENSQCDF 456 E++Q + Sbjct: 485 LEDAQTEG 492 >gi|56417033|ref|YP_154107.1| ATP-dependent clp protease ATP-binding subunit [Anaplasma marginale str. St. Maries] Length = 872 Score = 65.2 bits (158), Expect = 4e-09 Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 20/189 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P+ + ++ E+ ++ T + A R Sbjct: 333 RFQPVFVAEPTTGDTIS--ILRGLKEKYELHHGIRITDSAIVAAATLSNRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + ++E K I+ ++ + + E+++ + + +EA ++ Sbjct: 383 -TDRFLPDKAIDLIDEAASRARIEIDSKPEIIDSIDRRIMQLKIESEVLKNEKNEASQQR 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM-- 461 SK+ K+++S+ +E + L E +Q + + Sbjct: 442 LAVINAELNELSSEAADLNSKWQAEKIKISKMQELTEKLDGARIELEQAQRSGNLSRAGE 501 Query: 462 RMESEIRGL 470 M I L Sbjct: 502 LMYGVIPSL 510 >gi|11561806|gb|AAC83688.2| 101 kDa heat shock protein; HSP101 [Nicotiana tabacum] Length = 909 Score = 65.2 bits (158), Expect = 4e-09 Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 18/174 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+ + ++ E V+ R + V A+ R Sbjct: 334 RFQQVYVAEPSVADTIS--ILRGLKERYEGHHGVKIQDRALVVAAQLSSRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A +++++ + +I+ LE + E + + D+A + Sbjct: 384 -TGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHALEKEKDKASKAR 442 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFD 457 +Y K R+ E +Q E + A + ++ +D Sbjct: 443 LIEVRKELDDLRDKLQPLMMRYKKEKERIDELRRLKQKRDELIYALQEAERRYD 496 >gi|67919330|ref|ZP_00512911.1| AAA ATPase, central region:Clp, N terminal [Chlorobium limicola DSM 245] Length = 441 Score = 65.2 bits (158), Expect = 4e-09 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 16/112 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ EI V+ + AE R Sbjct: 335 RFQTVLVDQPSVEDTVS--ILRGLKEKYEIHHGVRIKDAALVAAAELSNRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A + L++E +++ L +R + E + + + Sbjct: 385 -SDRFLPDKAIDLIDEASSRLRLEIDSSPEELDRLNREIRRLEIEREALKRE 435 >gi|66505208|ref|XP_392252.2| PREDICTED: similar to ENSANGP00000028094 [Apis mellifera] Length = 3293 Score = 64.8 bits (157), Expect = 4e-09 Identities = 34/193 (17%), Positives = 63/193 (32%), Gaps = 41/193 (21%) Query: 102 IQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPADDCDCDICSNKKG---FCNLC--- 155 Q+F H S S + LY R CQ+ + C + + G C++C Sbjct: 809 RQSFHH---SCLSKSGVSARLYSPERPYVCQSCVKCKSCGSEGVNVHVGNLPLCSMCFKL 865 Query: 156 -----MCVICSK-FDFASNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEM 208 C +C + ++ + + C CS+W H C + + ++ + Sbjct: 866 RQQGNYCPLCQRCYNENDFDTKMMECSECSYWVHAQCEGLSDERYQILSYL-----PDTI 920 Query: 209 LFHCIACNH--------------TSELFGFVKDVFQ----HCAPNW--DFEALIKELDFV 248 F C C+ + G +K + + A W E L + + Sbjct: 921 EFTCSQCSSNPNSIWRNAIEAELKAGFIGVIKSLSKNKKVCAALKWSPRKECLCRSVSNG 980 Query: 249 RKIFRGSEDARGK 261 +K+ SE Sbjct: 981 KKLDFSSEKTDSN 993 >gi|50916753|ref|XP_468773.1| putative heat shock protein [Oryza sativa (japonica cultivar-group)] Length = 978 Score = 64.8 bits (157), Expect = 4e-09 Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + + A R Sbjct: 415 RFQQVYVDQPSVEDTIS--ILRGLRERYELHHGVRISDSALVAAALLSDRYI-------- 464 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R L DKA + LKME K ++E++ V + E D+A R+ Sbjct: 465 -SGRFLPDKAIDLVDESAAKLKMEITSKPTALDEIDRAVIKLEMERLSLTNDTDKASRD 522 >gi|39944910|ref|XP_361992.1| hypothetical protein MG04437.4 [Magnaporthe grisea 70-15] Length = 786 Score = 64.8 bits (157), Expect = 5e-09 Identities = 36/191 (18%), Positives = 65/191 (34%), Gaps = 23/191 (12%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ + P++E+ ++ E+ V+ T + A R Sbjct: 235 EKDVALARRFQPILVNEPTVEDTIS--ILRGIKDKYEVHHGVRITDGALVAAAAYSNRYI 292 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A + L+++++ K I L+ + Q E + + + Sbjct: 293 ---------TDRFLPDKAIDLMDEAASSLRLQQESKPEDIMRLDQKIMTIQIELESLRKE 343 Query: 398 ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE------ELKAQEN 451 D A RE K+ K R SE + +Q E EL+ + Sbjct: 344 KDVASRERREKLESDLKKLQDEVKELNDKWDKER-SEIDAIKQTQAELDRARIELEVAQR 402 Query: 452 SQCDFDPMKMR 462 ++R Sbjct: 403 EGNFGRASELR 413 >gi|15023863|gb|AAK78935.1| ATPase with chaperone activity, two ATP-binding domains [Clostridium acetobutylicum ATCC 824] Length = 865 Score = 64.8 bits (157), Expect = 5e-09 Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 18/186 (9%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ+ D P++++ ++ EI V+ + A+ R Sbjct: 328 EKDKALERRFQKVQIDEPTVDDAIS--ILRGLKERFEIHHGVRIHDNAIVAAAKLSDRYI 385 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 R L DKA A ++ME +++ L+ + + E + + Sbjct: 386 ---------TGRFLPDKAIDLIDEAGAMVRMEIDSMPTELDMLKRKIFQMEIEKEALSKE 436 Query: 398 ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELKAQ-ENSQCD 455 +D+ RE T+KY K + + + + +E++ Q E ++ + Sbjct: 437 SDKFSRERLESIQKELSDLKDKDKAMTAKYDKEKAQIQGIKELKTKLDEIRGQIEKAERE 496 Query: 456 FDPMKM 461 +D K Sbjct: 497 YDLNKA 502 >gi|9755800|emb|CAC01744.1| clpB heat shock protein-like [Arabidopsis thaliana] Length = 968 Score = 64.8 bits (157), Expect = 5e-09 Identities = 28/119 (23%), Positives = 43/119 (36%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V+ + + A R Sbjct: 408 RFQQVYVDQPTVEDTIS--ILRGLRERYELHHGVRISDSALVEAAILSDRYI-------- 457 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R L DKA A LKME K ++EL+ V + E D+A RE Sbjct: 458 -SGRFLPDKAIDLVDEAAAKLKMEITSKPTALDELDRSVIKLEMERLSLTNDTDKASRE 515 >gi|66805423|ref|XP_636444.1| hypothetical protein DDB0188234 [Dictyostelium discoideum] Length = 795 Score = 64.8 bits (157), Expect = 5e-09 Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 16/117 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PS+E+ ++ E+ V+ T + R Sbjct: 267 RFQSVLVQEPSVEDSIA--ILRGLKERYEVHHGVRITDSALVAAVVNSQRYI-------- 316 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A + L+++++ +IE L + + + E + + + D+ Sbjct: 317 -TDRFLPDKAIDLIDEAASRLRLQQESLPEEIENLNRQIIVSKIELEALKKEKDQVS 372 >gi|17131414|dbj|BAB74021.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120] Length = 880 Score = 64.8 bits (157), Expect = 5e-09 Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 18/115 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+EN ++ E+ V+ + + A R Sbjct: 335 RFQQVYVDQPSVENTIS--ILRGLKERYEVHHNVKISDSALVAAATLSARYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR L DKA A LKME K +E ++ RL Q E + L +E Sbjct: 385 -ADRFLPDKAIDLVDEAAAQLKMEITSKPADLEAIDR--RLMQLEMEKLSLAGEE 436 >gi|71837201|ref|ZP_00676967.1| AAA ATPase, central region:Clp, N terminal [Pelobacter propionicus DSM 2379] Length = 873 Score = 64.8 bits (157), Expect = 5e-09 Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 37/155 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + P++E+ ++ E+ ++ + A R Sbjct: 337 RFQPVLVEQPTVEDTVS--ILRGLRERFEVHHGIKIQDSALVAAATLSNRYI-------- 386 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 +R L DKA A L+ E +++ + V + E + + D A +E Sbjct: 387 -TERFLPDKAIDLVDEACAMLRTEIDSLPSELDTINRRVMQLEIEEVALKKEKDRASQE- 444 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ 440 + LR A++R + Sbjct: 445 --------------------RLKALRRELADDRER 459 >gi|70799667|gb|AAZ09583.1| Serine peptidase, putative [Leishmania major strain Friedlin] Length = 867 Score = 64.4 bits (156), Expect = 5e-09 Identities = 37/187 (19%), Positives = 65/187 (34%), Gaps = 30/187 (16%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 F PS+E E ++ E VQ T + + V A+ R Sbjct: 331 RFMPVQVHEPSVE--ECTSILRGLKDRYEQHHGVQITDKAVVVAAQLAGRYI-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 +R L DKA A ++++ + +I+ LE R + E Q D + +E Sbjct: 381 -TNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQLEIEERALQRDKDASAKER 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRME- 464 +KY E+ + +EL+A +Q D K+++E Sbjct: 440 LKAVKAEIQKVEEKLGPLLAKY---------EQERGRIDELQA---TQAKLDEKKVKLER 487 Query: 465 -SEIRGL 470 +R + Sbjct: 488 AERMRDM 494 >gi|68002317|ref|ZP_00534948.1| AAA ATPase, central region:Clp, N terminal [Geobacter metallireducens GS-15] Length = 864 Score = 64.4 bits (156), Expect = 5e-09 Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 16/114 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS+E+ ++ E ++ + A R Sbjct: 334 RFQQVYTGEPSVEDTIA--ILRGLKEKYETYHGIRIKDSAIIAAATLSDRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD 399 DR L DKA A + L++E +I+E+E + + E + D Sbjct: 384 -TDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEVERKIIQLEIEKQALLREQD 436 >gi|68551190|ref|ZP_00590613.1| AAA ATPase, central region:Clp, N terminal [Pelodictyon phaeoclathratiforme BU-1] Length = 441 Score = 64.4 bits (156), Expect = 6e-09 Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 23/121 (19%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ EI V+ + AE R Sbjct: 335 RFQTVVVDQPSVEDTVS--ILRGLKEKYEIHHGVRIKDAAIVAAAELSNRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L++E +++ + +R + E + RRE Sbjct: 385 -ADRFLPDKAIDLIDEASSRLRLEIDSSPEELDRINREIRRLEIEREAL-------RREI 436 Query: 406 E 406 E Sbjct: 437 E 437 >gi|39982528|gb|AAR33988.1| ClpB protein [Geobacter sulfurreducens PCA] Length = 865 Score = 64.4 bits (156), Expect = 6e-09 Identities = 36/203 (17%), Positives = 59/203 (29%), Gaps = 42/203 (20%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS+E+ ++ E ++ + A R Sbjct: 334 RFQQVYTGEPSVEDTIA--ILRGLKEKYENYHGIRIKDSAIIAAATLSDRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEA-------------D 392 DR L DKA A + L++E +I+E+E + + E + Sbjct: 384 -TDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEVERRIIQLEIEKQALLRESQDPHSLE 442 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENS 452 + ADE L+ RL E EE K E Sbjct: 443 RLKKLADELEELKAKSAELKGHWQREKDIIGRVSSLRQRLEE-------KREEAKKAERE 495 Query: 453 QCDFDPMKMR------MESEIRG 469 ++R +E EI Sbjct: 496 GNLARTAEIRYGEIPAIEKEIAD 518 >gi|7435720|pir||D71409 probable endopeptidase Clp ATP-binding chain - Arabidopsis thaliana Length = 831 Score = 64.4 bits (156), Expect = 6e-09 Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 6/115 (5%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+ + ++ E V+ R + + A+ R R Sbjct: 298 RFQQVFVAEPSVPDTIS--ILRGLKEKYEGHHGVRIQDRALVLSAQLSERYITGRRLPDK 355 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 A D L D++CA +++ Q +I+ LE V + E + + D+ EA Sbjct: 356 AID--LVDESCAHVKAQLDIQ--PEEIDSLERKVMQLEIEIHALEKEKDDKASEA 406 >gi|7380324|emb|CAB84911.1| ClpB protein [Neisseria meningitidis Z2491] Length = 859 Score = 64.4 bits (156), Expect = 6e-09 Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ EI + T + AE R Sbjct: 332 RFQKVLVGEPSVEDTIA--ILRGLQERYEIHHGIDITDPAIVAAAELSDRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A + +KME++ K +++++ + + E + + D+A + Sbjct: 382 -TDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASK 438 >gi|23128140|ref|ZP_00109994.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc punctiforme PCC 73102] Length = 879 Score = 64.4 bits (156), Expect = 7e-09 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 18/115 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+EN ++ E+ V+ + + A R Sbjct: 335 RFQQVFVDQPSVENTIS--ILRGLKERYEVHHNVKISDSALVAAATLSARYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR L DKA A LKME K ++E ++ RL Q E + L +E Sbjct: 385 -SDRFLPDKAIDLVDEAAAQLKMEITSKPAELETIDR--RLMQLEMEKLSLAGEE 436 >gi|67517989|ref|XP_658767.1| hypothetical protein AN1163.2 [Aspergillus nidulans FGSC A4] Length = 800 Score = 64.4 bits (156), Expect = 7e-09 Identities = 38/201 (18%), Positives = 65/201 (32%), Gaps = 28/201 (13%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ PS+ ++ E+ V+ T + A R Sbjct: 247 EKDVALARRFQPIQVGEPSVAATIS--ILRGIKDKYEVHHGVRITDGALVAAATYSNRYI 304 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A + L+++++ K I EL+ + Q E + + + Sbjct: 305 ---------TDRFLPDKAIDLVDEAASALRLQQESKPDIIRELDRDITTIQIELESLRKE 355 Query: 398 ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS------EAEERRQYLFEELKAQEN 451 D + RE T + K + EE + FE E Sbjct: 356 TDISSRERREKLEEDLKAKREESRKLTEIWEKEKAEIESLKRTKEELERTRFE----LEQ 411 Query: 452 SQCDFDPMKM--RMESEIRGL 470 +Q + + K S+I L Sbjct: 412 AQREGNFAKAGELRYSKIPSL 432 >gi|67935560|ref|ZP_00528580.1| AAA ATPase, central region:Clp, N terminal [Chlorobium phaeobacteroides DSM 266] Length = 452 Score = 64.1 bits (155), Expect = 7e-09 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 16/112 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ EI V+ + AE R Sbjct: 345 RFQTVLVDQPSVEDTVS--ILRGLKEKYEIHHGVRIKDAALVAAAELSDRYI-------- 394 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A + L++E +++ L +R + E + + + Sbjct: 395 -ADRFLPDKAIDLIDEASSRLRLEIDSSPEELDRLNREIRRLEIEREALKRE 445 >gi|58417961|emb|CAI27165.1| ClpB protein [Ehrlichia ruminantium str. Welgevonden] Length = 863 Score = 64.1 bits (155), Expect = 8e-09 Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 28/218 (12%) Query: 267 ADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 DE + ++ + + FQ P+ ++ ++ E + Sbjct: 322 LDEYRKHIEKDV--------ALARRFQTIFISEPTCDDTIS--MLRGLKERYEGHHGIDI 371 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELE 381 R + R DR L DKA A + +ME K I++L+ Sbjct: 372 PDRSIIAAVALSQRYI---------TDRYLPDKAIDLIDEAASRARMEIDSKPEVIDKLD 422 Query: 382 SIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERR 439 + + E + + ++DE+ ++ +SK+ K+++S+ + + Sbjct: 423 RKIMQLKIEIGVLEKESDESSKQRLMKLKDELEKLNVQSAELSSKWQAEKMKMSKMKACK 482 Query: 440 QYLFEELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 + L E +Q D K M I + K ++ Sbjct: 483 EKLDIARSDLERAQRSGDLAKAGELMYGVIPEIEKELK 520 >gi|530207|gb|AAA66338.1| heat shock protein Length = 911 Score = 64.1 bits (155), Expect = 8e-09 Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 18/174 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+ + ++ E V+ R + + A+ R Sbjct: 334 RFQQVFVAEPSVVDTIS--ILRGLKERYEGHHGVRIQDRALVMAAQLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR--R 403 R L DKA A +++++ + +I+ LE + E + + D+A R Sbjct: 384 -TGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKAR 442 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFD 457 E + K R+ E ++ E L A + ++ +D Sbjct: 443 LVEVRKELDDLRDKLQPLMMKYRKEKERVDEIRRLKKKREELLFALQEAERRYD 496 >gi|11561808|gb|AAC83689.2| 101 kDa heat shock protein; HSP101 [Triticum aestivum] Length = 918 Score = 63.7 bits (154), Expect = 1e-08 Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 13/161 (8%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+ + ++ E V+ R + V A+ R Sbjct: 336 RFQQVYVAEPSVADTIS--ILRGLKEKYEGHHGVRIQDRAIVVAAQLSARYI----MGRH 389 Query: 351 ACDR--ELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXX 408 D+ +L D+ACA ++++ Q +I+ LE + E + + D+A + Sbjct: 390 LPDKAIDLVDEACANVRVQLDSQ--PEEIDNLERKRIQLEVELHALEKEKDKASKARLVE 447 Query: 409 XXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELK 447 T KY K R+ E + +Q EEL+ Sbjct: 448 VRKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQRR-EELQ 487 >gi|3560150|emb|CAA20737.1| SPBC4F6.17c [Schizosaccharomyces pombe] Length = 803 Score = 63.7 bits (154), Expect = 1e-08 Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 25/166 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + PS+ + ++ E+ V+ T + A R Sbjct: 265 RFQAVMVNEPSVADTIS--ILRGLKERYEVHHGVRITDDALVTAATYSARYI-------- 314 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L+++++ K ++ L+ + Q E + + + D E Sbjct: 315 -TDRFLPDKAIDLVDEACSSLRLQQESKPDELRRLDRQIMTIQIELESLRKETDTTSVER 373 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQEN 451 K + +LS A E + L + +K + Sbjct: 374 REKLESKLTDL---------KEEQDKLSAAWEEERKLLDSIKKAKT 410 >gi|51473305|ref|YP_067062.1| ATP-binding ClpB chaperone [Rickettsia typhi str. Wilmington] Length = 858 Score = 63.7 bits (154), Expect = 1e-08 Identities = 38/221 (17%), Positives = 72/221 (32%), Gaps = 48/221 (21%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PS+E+ ++ E+ V+ + + A R Sbjct: 333 RFQPVYVGEPSVEDTIS--ILRGIKEKYELHHAVRISDSAIVAAATLSNRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + +K+E K +++EL+ + + E + + DE ++ Sbjct: 383 -TDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSKKK 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEA----EERRQYLFE--------------- 444 +K+ K +L +A EE Q + Sbjct: 442 ITSLTEELKQLDSKSYDMNTKWQAAKSKLQQAQKLKEELEQARIDLDRAERDANLAKASE 501 Query: 445 -----------ELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 +L+A EN ++ ES+I ++ + Sbjct: 502 LKYGIIPEIMNKLQAAENMDNKGLLKEIVSESDIASIISRI 542 >gi|68553506|ref|ZP_00592879.1| AAA ATPase, central region:Clp, N terminal [Prosthecochloris aestuarii DSM 271] Length = 439 Score = 63.7 bits (154), Expect = 1e-08 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 16/112 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ EI V+ + AE R Sbjct: 335 RFQTVIVDQPSVEDTIS--ILRGLKEKYEIHHGVRVKDSAIVAAAELSNRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A + L++E +++ + +R + E + + + Sbjct: 385 -SDRFLPDKAIDLIDEASSRLRLEIDSDPEELDRVNREIRRLEIEREALKRE 435 >AAA_CLPB_202-397_PF00004.17 Length = 196 Score = 63.7 bits (154), Expect = 1e-08 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ G ++ E+ V+ + AE R Sbjct: 133 RFQQVYVGEPSVEDTVG--ILRGLKERYEVHHGVRIQDSALVAAAELSHRYI-------- 182 Query: 351 ACDRELEDKA 360 R L DKA Sbjct: 183 -TSRFLPDKA 191 >gi|71281252|ref|YP_270571.1| ATP-dependent chaperone protein ClpB [Colwellia psychrerythraea 34H] Length = 861 Score = 63.3 bits (153), Expect = 1e-08 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 16/116 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS+E+ ++ E+ V T + A R Sbjct: 332 RFQKVLVEEPSVEDTIA--ILRGLKERYELHHSVNITDPAIVAAATLSHRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA 401 DR+L DKA A + ++++ K ++ LE + + E + DEA Sbjct: 382 -SDRQLPDKAIDLIDEAASSIRLQMDSKPEDLDRLERRLIQLKLEQRALEKDEDEA 436 >gi|22957954|ref|ZP_00005638.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rhodobacter sphaeroides 2.4.1] Length = 870 Score = 62.9 bits (152), Expect = 2e-08 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + P++E+ ++ E+ V+ + A R Sbjct: 331 RFQPLMVEEPTVEDTIS--ILRGIKEKYELHHGVKIADAALVAAATLSHRYI-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A + L+ME K +++ L+ + Q EA+ + + D A ++ Sbjct: 381 -TDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDRQILQAQIEAEALKKEDDAASKD 438 >gi|21675087|ref|NP_663152.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Chlorobium tepidum TLS] Length = 442 Score = 62.9 bits (152), Expect = 2e-08 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 16/112 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ EI V+ + AE R Sbjct: 335 RFQTVIVDQPSVEDTVS--ILRGLKEKYEIHHGVRIKDAALVAAAELSNRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A + L++E + +++ + +R + E + + + Sbjct: 385 -ADRFLPDKAIDLIDEACSRLRLEIDSEPEELDRINRELRRLEIEREALKRE 435 >gi|22535406|emb|CAC87117.1| heat shock protein 101 [Oryza sativa (japonica cultivar-group)] Length = 912 Score = 62.5 bits (151), Expect = 2e-08 Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 19/164 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+ + ++ E V+ R + V A+ R Sbjct: 335 RFQQVFVAEPSVPDTIS--ILRGLKEKYEGHHGVRIQDRALVVAAQLSARYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A +++++ + +I+ LE + E + + D+A + Sbjct: 385 -MGRHLPDKAIDLVGEARANVRVQLDSQPEEIDNLERKRIQLEVEHHALEKEKDKASKAR 443 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELK 447 T KY K R+ E + +Q EEL+ Sbjct: 444 LVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQRR-EELQ 486 >gi|9651530|gb|AAF91178.1| ClpB [Phaseolus lunatus] Length = 977 Score = 62.5 bits (151), Expect = 2e-08 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E+ V+ + + A R Sbjct: 420 RFQQVFCSQPSVEDTIS--ILRGLRERYELHHGVKISDSALVSAAVLADRYI-------- 469 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 +R L DKA A LKME K +++E++ + + E + D+A +E Sbjct: 470 -TERFLPDKAIDLVDEAAAKLKMEITSKPTELDEIDRAILKLEMEKLSLKNDTDKASKE 527 >gi|67940377|ref|ZP_00532807.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chlorobium phaeobacteroides BS1] Length = 863 Score = 62.5 bits (151), Expect = 2e-08 Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 16/125 (12%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ + P + ++ E V+ + E R Sbjct: 322 EKDKALERRFQIVMVNEP--DTLSAVSILRGLKERYESHHKVRIKDEAIVAAVELSQRYI 379 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A + LK+E ++E +E VR + E + + + Sbjct: 380 ---------TDRFLPDKAIDLIDEAASKLKLEINSLPEELEIVERRVRQLEIEREAIKRE 430 Query: 398 ADEAR 402 D+ + Sbjct: 431 HDQLK 435 >gi|67914654|gb|EAM63991.1| AAA ATPase, central region:Clp, N terminal [Chlorobium phaeobacteroides BS1] Length = 439 Score = 62.5 bits (151), Expect = 2e-08 Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 16/112 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ EI V+ + AE R + Sbjct: 335 RFQTVIVDQPSVEDTVS--ILRGLKEKYEIHHGVRILDSAIIAAAELSDRYISE------ 386 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 R L DKA A + L++E +++++ +R + E + + + Sbjct: 387 ---RFLPDKAIDLIDEASSRLRLEMDSDPEELDKVNREIRRLEIEREALKRE 435 >gi|4481954|emb|CAB38512.1| SPBC16D10.08c [Schizosaccharomyces pombe] Length = 905 Score = 62.5 bits (151), Expect = 2e-08 Identities = 40/195 (20%), Positives = 70/195 (35%), Gaps = 22/195 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PS+E+ ++ E+ V + R + A + Sbjct: 336 RFQIILVKEPSIEDTIS--ILRGLKEKYEVHHGVTISDRALVTAA---------HLASRY 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L D A A +++ R+ + ++ LE +R + E + + DEA +E Sbjct: 385 LTSRRLPDSAIDLVDEAAAAVRVTRESQPEVLDNLERKLRQLRVEIRALEREKDEASKER 444 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQ-ENS--QCDFDPMK 460 KY K R SE ++ ++ +ELKA+ E++ + DF Sbjct: 445 LKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKR-RLDELKAKAEDAERRNDFTLAA 503 Query: 461 MRMESEIRGLLKGME 475 I L K +E Sbjct: 504 DLKYYGIPDLQKRIE 518 >gi|66850118|gb|EAL90445.1| ATP-dependent Clp protease, putative [Aspergillus fumigatus Af293] Length = 797 Score = 62.1 bits (150), Expect = 3e-08 Identities = 34/183 (18%), Positives = 63/183 (34%), Gaps = 22/183 (12%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ PS+ ++ E+ V+ T + A R Sbjct: 244 EKDVALARRFQPIQVGEPSVAATIS--ILRGIKNKYEVHHGVRITDAALVAAATYSNRYI 301 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A + L+++++ K I EL+ + Q E + + + Sbjct: 302 ---------TDRFLPDKAIDLVDEAASALRLQQESKPDVIRELDRQITTIQIELESLRKE 352 Query: 398 ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK----AQENSQ 453 D + RE T + K + +E E ++ EEL+ + +Q Sbjct: 353 TDISSRERREKLQEDLKAKQEESAKLTEVWEKEK-AEIESLKRTK-EELERARFELDRAQ 410 Query: 454 CDF 456 + Sbjct: 411 REG 413 >gi|68054833|ref|ZP_00538983.1| AAA ATPase, central region:Clp, N terminal:DNA-directed DNA polymerase B [Exiguobacterium sp. 255-15] Length = 857 Score = 62.1 bits (150), Expect = 3e-08 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 6/113 (5%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P +E+ ++ EI V+ + A R Sbjct: 331 RFQQVLVAEPDVEDTIS--ILRGLKERFEIHHGVRIHDNALVAAAILSDRYITDRFMPDK 388 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 A D L D+ACA+ ME +++ L V + E + + DEA R Sbjct: 389 AID--LVDEACAMIRTDME--SMPAELDSLVRRVMQLEIEEAALKKETDEASR 437 >gi|15639065|ref|NP_218511.1| ATP-dependent Clp protease subunit B (clpB) [Treponema pallidum subsp. pallidum str. Nichols] Length = 878 Score = 62.1 bits (150), Expect = 3e-08 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ E+ V+ + R Sbjct: 332 RFQQVYCVQPTVEDTIA--ILRGLQEKYEVHHGVRIKDEALVAATVLSDRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 +R L DKA A + LKME + + +++++E + E ++D A +E Sbjct: 382 -TNRFLPDKAIDLVDEAASRLKMEIESQPVELDQVERKILQLNIEKASLLKESDPASKE 439 >gi|42527829|ref|NP_972927.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Treponema denticola ATCC 35405] Length = 859 Score = 62.1 bits (150), Expect = 3e-08 Identities = 32/182 (17%), Positives = 58/182 (31%), Gaps = 36/182 (19%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ E+ V+ + A R Sbjct: 332 RFQQVYCPEPTVEDTIA--ILRGLQEKYEVHHGVRIRDEALIAAAVLSNRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA---- 401 +R L DKA A + LKME + + +++++E + E + D A Sbjct: 382 -TNRFLPDKAIDLVDEAASRLKMEIESQPVELDQVERKILQLNIEKVSIGKENDTASKER 440 Query: 402 -------------RREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ---YLFEE 445 +R A Y + +LR+ E + R+ E Sbjct: 441 LLKLEEELAELSSKRNAMQAQWQNEKARINESRKYKEELEQLRIEETKYSREGNLNKAAE 500 Query: 446 LK 447 LK Sbjct: 501 LK 502 >PHD_TRX_1410-1469_PF00628.16 Length = 60 Score = 61.7 bits (149), Expect = 4e-08 Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 7/65 (10%) Query: 156 MCVICSK-FDFASNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCI 213 C IC K +D + + C C+ W H+ C + + + + + F C Sbjct: 1 FCPICQKCYDDNDFDLKMMECGDCNQWVHSKCEGLSDEQYNLLSTL-----PESIEFICK 55 Query: 214 ACNHT 218 C Sbjct: 56 KCARR 60 >gi|28378553|ref|NP_785445.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus plantarum WCFS1] Length = 867 Score = 61.7 bits (149), Expect = 4e-08 Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 16/126 (12%) Query: 282 LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRM 341 ++ + FQ+ PS+E+ ++ EI V+ + A+ R Sbjct: 325 MEKDKALERRFQKVLVAEPSVEDTIS--ILRGLKERFEIHHGVRIHDNALVAAAKLSDRY 382 Query: 342 FKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL 396 DR L DKA A ++++E +++++ + + E + Sbjct: 383 I---------TDRYLPDKALDLVDEASAEIRVEMNSNPTELDQVNRQLMRLEVEEAALKK 433 Query: 397 KADEAR 402 + D+A Sbjct: 434 ETDDAS 439 >gi|68246595|gb|EAN28691.1| AAA ATPase, central region:Clp, N terminal [Magnetococcus sp. MC-1] Length = 903 Score = 61.7 bits (149), Expect = 4e-08 Identities = 27/119 (22%), Positives = 40/119 (33%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PS+E ++ E+ V+ T + A R Sbjct: 376 RFQPVQVREPSVEATIS--ILRGIKDKYELHHGVRITDAAIVAAATLAHRYI-------- 425 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A ++ME K ++ L+ + Q E + D A RE Sbjct: 426 -SDRFLPDKAIDLVDEAAARIRMEITSKPQVLDSLDRQILQLQIEQSALSKEKDSASRE 483 >gi|71363823|ref|ZP_00654425.1| AAA ATPase, central region:Clp, N terminal [Psychrobacter cryohalolentis K5] Length = 865 Score = 61.7 bits (149), Expect = 4e-08 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 18/115 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V + A R Sbjct: 329 RFQKVLVDEPTVEDTIA--ILRGLKERYELHHGVDIQDSAIIAAARMSHRYI-------- 378 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + L+ME K + +L+S RL Q + LK +E Sbjct: 379 -TDRKLPDKAIDLIDEAASRLRMEMDSKPESLGKLDS--RLIQLKMQREVLKNEE 430 >gi|15075632|emb|CAC47187.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Sinorhizobium meliloti] Length = 868 Score = 61.7 bits (149), Expect = 4e-08 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 18/174 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + P++E+ ++ E V+ + + A R Sbjct: 333 RFQPVMVEEPTVEDTIS--ILRGLKEKYEQHHKVRISDSALVAAAALSNRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + L+M+ K +++EL+ V + E + + + D + ++ Sbjct: 383 -TDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRVIQLKIEREALKKETDVSSKDR 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFD 457 T+++ K +L +A + ++ L E + +Q + Sbjct: 442 LAKLELDLSSLEEEAAALTARWQAEKQKLGQAADLKKQLDEARNELQIAQRKGE 495 >gi|67931988|ref|ZP_00525140.1| AAA ATPase, central region:Clp, N terminal [Solibacter usitatus Ellin6076] Length = 869 Score = 61.4 bits (148), Expect = 5e-08 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ E+ V+ + A R Sbjct: 327 RFQPVMVDQPSVEDTIS--ILRGLKERYEVHHGVRIKDAALVAAAVLSDRYI-------- 376 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA + L+ E +++E + + E + + + D+A +E Sbjct: 377 -TDRFLPDKAIDLVDESAARLRTEIDSMPVELDETRRRIMQLEIEREALRKEKDKASKE 434 >gi|42453220|ref|ZP_00153127.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rickettsia rickettsii] Length = 857 Score = 61.4 bits (148), Expect = 6e-08 Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E+ V+ + + A R Sbjct: 333 RFQPVYVSEPTVEDTIS--ILRGIKEKYELHHAVRISDSAIVAAATLSNRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A + +K+E K +++EL+ + + E + + DE + Sbjct: 383 -TDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSK 439 >gi|65303851|emb|CAI76228.1| ClpB protein, putative [Theileria annulata] Length = 1150 Score = 61.0 bits (147), Expect = 7e-08 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 24/129 (18%) Query: 267 ADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 E +K++ + FQ D P++E ++ E+ V+ Sbjct: 462 LQEYRQKIEKD--------KALERRFQPIYIDEPNIEETI--NILRGLKERYEVHHGVRI 511 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELE 381 + R DR L DKA A LK++ K Q++ +E Sbjct: 512 LDSTLIQAVLLSNRYI---------TDRYLPDKAIDLIDEAAAKLKIQLSSKPLQLDIIE 562 Query: 382 SIVRLKQAE 390 + + E Sbjct: 563 RKLLQLEME 571 >gi|50309407|ref|XP_454711.1| unnamed protein product [Kluyveromyces lactis] Length = 825 Score = 60.6 bits (146), Expect = 9e-08 Identities = 39/189 (20%), Positives = 64/189 (33%), Gaps = 12/189 (6%) Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR 346 + FQ + PS+ + ++ E+ V+ T + A R Sbjct: 275 ALTRRFQPIILNEPSVHDTIS--ILRGLKEKYEVHHGVRITDSALVSAAVLSNRYINDRF 332 Query: 347 SVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD----EAR 402 A D L D+ACAV L+ E K I+ ++ V Q E + + + D E R Sbjct: 333 LPDKAID--LVDEACAVLRLQHE--SKPDSIQAIDRAVMTMQIELESLKKETDPVSVERR 388 Query: 403 REAEXXXXXXXXXXXXXXXXY-TSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM 461 E E + T K + A+E L EL + ++ Sbjct: 389 EELEKDLEVKKKELERLTEIWETEKSELDSIKTAKEDLDKLRTELDICQREGDYAKASEL 448 Query: 462 RMESEIRGL 470 R ++I L Sbjct: 449 R-YAKIPEL 456 >gi|34540850|ref|NP_905329.1| clpB protein [Porphyromonas gingivalis W83] Length = 863 Score = 60.6 bits (146), Expect = 9e-08 Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 16/127 (12%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ D P + ++ E V+ + + R Sbjct: 322 EKDKALERRFQMVMVDEP--DELSSISILRGLKEKYENHHKVRIKDDAIIAAVKLSHRYI 379 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 +R L DKA A L+ME +++E+ ++ + E + + + Sbjct: 380 ---------TERFLPDKAIDLMDEAAARLRMEVDSLPEELDEISRRIKQLEIEREAIKRE 430 Query: 398 ADEARRE 404 DE + + Sbjct: 431 NDEEKVQ 437 >gi|42524440|ref|NP_969820.1| ATPase with chaperone activity, two ATP-binding domains [Bdellovibrio bacteriovorus HD100] Length = 855 Score = 60.6 bits (146), Expect = 9e-08 Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + PS+E+ ++ E+ ++ T + + R Sbjct: 328 RFQTVMVEEPSVEDAI--TILRGLKEKYEVHHGIRITDAALVSAVKLSHRYI-------- 377 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 +R L DKA A + L +E + +++++E + + E + + + DE+ RE Sbjct: 378 -TNRFLPDKAIDLIDEAASKLGIETRSVPEEVDKIERELMQLRIEKEALKKEKDESARE 435 >gi|71677561|ref|ZP_00675297.1| AAA ATPase, central region:Clp, N terminal [Trichodesmium erythraeum IMS101] Length = 905 Score = 60.6 bits (146), Expect = 1e-07 Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 16/105 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS+E+ ++ E V+ T + A R Sbjct: 353 RFQKVEVGQPSVEDTIS--ILRGLKDRYETHHGVKITDAALVAAATLSNRYI-------- 402 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAE 390 DR L DKA A LKME K ++E ++ + + E Sbjct: 403 -SDRFLPDKAIDLVDEAAAQLKMEITSKPVELEAIDRRIMQLEME 446 >gi|66359990|ref|XP_627173.1| multidomain chromatinic protein [Cryptosporidium parvum] Length = 2244 Score = 60.2 bits (145), Expect = 1e-07 Identities = 27/112 (24%), Positives = 34/112 (30%), Gaps = 28/112 (25%) Query: 128 NIACQNLLPADDC------------------DCDICSNKKGFCNLCMCVICSKFDFASNT 169 N C N C C C GF C IC K +S Sbjct: 567 NFNCSNCCKCIHCGYRDNGFMDYASWDSTFSSCIRCCK--GFERGQFCSICRKIWTSSWE 624 Query: 170 CRWIGCDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIACNHTSE 220 W+ CD+C W H DC I+ + K L++C AC Sbjct: 625 GEWLQCDICKFWVHYDCDKDLNEPIEFYSNVKN-------LYNCPACRSNDN 669 >gi|6013196|gb|AAF01280.1| heat shock protein 101 [Triticum aestivum] Length = 913 Score = 60.2 bits (145), Expect = 1e-07 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 13/161 (8%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+ + ++ E V+ R + + A+ R Sbjct: 335 RFQQVFVAEPSVPDTVS--ILRGLKEKYEGHHGVRIQDRALVIAAQLSSRYI----MGRH 388 Query: 351 ACDR--ELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXX 408 D+ +L D+ACA ++++ Q +I+ LE + E + + D+A + Sbjct: 389 LPDKAIDLVDEACANVRVQLDSQ--PEEIDNLERKRIQLEVELHALEKEKDKASKARLVD 446 Query: 409 XXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELK 447 KY K R+ E +Q EEL+ Sbjct: 447 VRKELDDLRDKLQPLQMKYRKEKERIDEIRSLKQRR-EELQ 486 >gi|6320464|ref|NP_010544.1| Oligomeric mitochondrial matrix chaperone that cooperates with Ssc1p in mitochondrial thermotolerance after heat shock; prevents the aggregation of misfolded matrix proteins; component of the mitochondrial proteolysis system; Hsp78p [Saccharomyces cerevisiae] Length = 811 Score = 60.2 bits (145), Expect = 1e-07 Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 22/197 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + PS+ + ++ E+ V+ T + A R Sbjct: 267 RFQPILLNEPSVSDTIS--ILRGLKERYEVHHGVRITDTALVSAAVLSNRYI-------- 316 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD---EAR 402 DR L DKA A L+++ + K +I++L+ + Q E + + + D R Sbjct: 317 -TDRFLPDKAIDLVDEACAVLRLQHESKPDEIQKLDRAIMKIQIELESLKKETDPVSVER 375 Query: 403 REA--EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMK 460 REA + + + A+ + EL+ + + Sbjct: 376 REALEKDLEMKNDELNRLTKIWDAERAEIESIKNAKANLEQARIELEKCQREGDYTKASE 435 Query: 461 MRMESEIRGLLKGMEMT 477 +R S I L K + ++ Sbjct: 436 LR-YSRIPDLEKKVALS 451 >gi|68989120|dbj|BAE06227.1| heat shock protein [Lycopersicon esculentum] Length = 980 Score = 60.2 bits (145), Expect = 1e-07 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V+ + + A R Sbjct: 415 RFQQVYVDQPTVEDTVS--ILRGLRERYELHHGVRISDTALVDAAILSDRYI-------- 464 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R L DKA A LKME K ++E+ V + E D+A ++ Sbjct: 465 -SGRFLPDKAIDLVDEAAAKLKMEITSKPTALDEINRAVLKLEMERLSLTNDTDKASKD 522 >gi|52698325|ref|ZP_00339733.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rickettsia akari str. Hartford] Length = 858 Score = 59.8 bits (144), Expect = 1e-07 Identities = 34/176 (19%), Positives = 63/176 (35%), Gaps = 26/176 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E+ V+ + + A R Sbjct: 333 RFQPVYVSEPTVEDTIS--ILRGIKEKYELHHAVRISDSAIVSAATLSNRYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + +K+E K +++EL+ + + E + + DE ++ Sbjct: 383 -TDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSKKK 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA----QENSQCD 455 +K+ K +L +A Q L EEL+ E ++ D Sbjct: 442 ITHLTEELEKLESKSYDMNAKWHAEKSKLQQA----QKLKEELERARINLERAERD 493 >gi|29341916|gb|AAO79702.1| endopeptidase Clp ATP-binding chain B [Bacteroides thetaiotaomicron VPI-5482] Length = 862 Score = 59.8 bits (144), Expect = 1e-07 Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 16/127 (12%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ D P + ++ E V+ + E R Sbjct: 322 EKDKALERRFQIVQVDEPDTLSTIS--ILRGLKERYENHHHVRIKDDAIIAAVELSSRYI 379 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A L+ME +++E+ ++ + E + + + Sbjct: 380 ---------TDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLEIEREAIKRE 430 Query: 398 ADEARRE 404 D+ + E Sbjct: 431 NDKPKLE 437 >gi|44983280|gb|AAS52462.1| AEL223Cp [Ashbya gossypii ATCC 10895] Length = 803 Score = 59.8 bits (144), Expect = 1e-07 Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 12/191 (6%) Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR 346 + FQ D PS+ + ++ E+ V+ T + A R Sbjct: 251 ALTRRFQPVILDEPSVSDTIS--ILRGLKERYEVHHGVRITDTAIVSAAVLSNRYINDRF 308 Query: 347 SVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE 406 A D L D+ACAV L+ E K I+ ++ + + E + + + D E Sbjct: 309 LPDKAID--LVDEACAVLRLQHE--SKPDSIQAIDRAIMTMEIELESLRKEEDPVSLERA 364 Query: 407 XXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELKA-QENSQCDFD---PMKM 461 T + K + EA + + E+ K E +Q + D ++ Sbjct: 365 DALKKSLKEKNDELEKLTKVWDKEKKEIEAIKSAKATLEQAKIDLEIAQREGDYGKASEL 424 Query: 462 RMESEIRGLLK 472 R ++I L K Sbjct: 425 R-YAKIPQLEK 434 >gi|53712497|ref|YP_098489.1| endopeptidase Clp ATP-binding chain B [Bacteroides fragilis YCH46] Length = 862 Score = 59.4 bits (143), Expect = 2e-07 Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 16/125 (12%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ D P +N ++ E V+ + E R Sbjct: 322 EKDKALERRFQIVQVDEP--DNLSTISILRGLKERYENHHHVRIKDDAIIAAVELSSRYI 379 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A L+ME ++E+ ++ + E + + + Sbjct: 380 ---------TDRFLPDKAIDLMDEAAAKLRMEVDSVPEGLDEISRKIKQLEIEREAIKRE 430 Query: 398 ADEAR 402 DE + Sbjct: 431 NDEPK 435 >gi|29376856|ref|NP_816010.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Enterococcus faecalis V583] Length = 868 Score = 59.4 bits (143), Expect = 2e-07 Identities = 30/197 (15%), Positives = 64/197 (32%), Gaps = 46/197 (23%) Query: 282 LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRM 341 ++ + FQ+ P++E+ ++ EI V + A R Sbjct: 325 MEKDKALERRFQKVLVKEPTVEDTIS--ILRGLKERFEIHHGVNIHDNALVAAATLSDRY 382 Query: 342 FKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL 396 DR L DKA A +++E +++++ + + E + Sbjct: 383 I---------TDRFLPDKAIDLVDEASATIRVEMNSMPTELDQVTRRLMQLEIEEAALKK 433 Query: 397 KADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR---------QYLFEELK 447 ++D+A ++ + L+ A+ R + EE+ Sbjct: 434 ESDDASKK---------------------RLANLQEELADLREEANSMKMQWETEKEEVN 472 Query: 448 AQENSQCDFDPMKMRME 464 A N + + D K +E Sbjct: 473 AVSNKRAEIDKAKHELE 489 >gi|68350763|gb|EAN31526.1| ClpB protein, putative [Theileria parva] Length = 985 Score = 59.0 bits (142), Expect = 2e-07 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 24/129 (18%) Query: 267 ADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 E +K++ + FQ D P++E ++ E+ V+ Sbjct: 418 LQEYRQKIEKD--------KALERRFQPIYIDEPNIEETI--NILRGLKERYEVHHGVRI 467 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELE 381 + R DR L DKA A LK++ K Q++ +E Sbjct: 468 LDSTLIQAVLLSNRYI---------TDRYLPDKAIDLIDEAAAKLKIQLSSKPLQLDIIE 518 Query: 382 SIVRLKQAE 390 + + E Sbjct: 519 RKLLQLEME 527 >gi|537446|gb|AAA67927.1| AtHSP101 Length = 911 Score = 59.0 bits (142), Expect = 3e-07 Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 18/174 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+ + ++ E V+ R + A+ R Sbjct: 333 RFQQVYVAEPSVPDTIS--ILRGLKEKYEGHHGVRIQDRALINAAQLSARYI-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A +++++ + +I+ LE + E + + D+A + Sbjct: 383 -TGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIELHALEREKDKASKAR 441 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFD 457 T KY K R+ E +Q E + + + ++ +D Sbjct: 442 LIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQKREELMFSLQEAERRYD 495 >gi|48870729|ref|ZP_00323448.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pediococcus pentosaceus ATCC 25745] Length = 863 Score = 59.0 bits (142), Expect = 3e-07 Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 46/192 (23%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ PS+E+ ++ EI V+ + A+ R Sbjct: 326 EKDKALERRFQRVLVKEPSIEDTIS--ILRGLKERFEIHHGVRIHDNALVAAAKLSSRYI 383 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A +K+E ++++++ + Q E + + Sbjct: 384 ---------TDRYLPDKAIDLIDEASAKIKVEMNSNPTELDQVKRQLMRLQVEERALKNE 434 Query: 398 ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYL-------FEELKA 448 +D + + L+ LSE +E + L EE+K Sbjct: 435 SDAESVK---------------------RLKDLQKELSETKEEKVKLESRWSAQKEEIKK 473 Query: 449 QENSQCDFDPMK 460 + + + D K Sbjct: 474 ISDKKNELDKAK 485 >gi|68209799|ref|ZP_00561666.1| AAA ATPase, central region:Clp, N terminal [Methanococcoides burtonii DSM 6242] Length = 869 Score = 59.0 bits (142), Expect = 3e-07 Identities = 21/119 (17%), Positives = 39/119 (32%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 F D P +EN ++ E+ V+ + A R Sbjct: 334 RFLPVLVDQPDVENTIS--ILRGLKEKYEVHHGVRIKDTALVAAAVLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A ++ K +++E + + + E + + + D +E Sbjct: 384 -SDRFLPDKAIDLVDEAAAKVRTAIDSKPSELDEADRKILQLEIEREALKKEKDAVSKE 441 >gi|28493713|ref|NP_787874.1| ATP-dependent protase ATP-binding subunit [Tropheryma whipplei str. Twist] Length = 705 Score = 59.0 bits (142), Expect = 3e-07 Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 16/133 (12%) Query: 277 KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE 336 + + L+ + FQ+ P+LE+ ++ E V + + E Sbjct: 169 EYREHLEKDPALERRFQQVFVGEPNLEDCIA--IMRGLKERYEAHHKVSISDTALVTAVE 226 Query: 337 EKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 R R+L DKA A + L+ME ++++L V + E Sbjct: 227 LSSRYI---------TGRQLPDKAIDLLDEAASSLRMEIDSSPVELDQLRREVDRLRLEE 277 Query: 392 DMFQLKADEARRE 404 + + D + Sbjct: 278 LALKSENDPTSEQ 290 >gi|50294636|ref|XP_449729.1| unnamed protein product [Candida glabrata] Length = 787 Score = 59.0 bits (142), Expect = 3e-07 Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 6/118 (5%) Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR 346 + FQ + PS+++ ++ E+ V+ T + A R Sbjct: 240 ALTRRFQPILLNEPSVQDTIS--ILRGLKERYEVHHGVRITDTALVSAAVLSNRYINDRF 297 Query: 347 SVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 A D L D+ACAV L+ E K +I+ L+ + Q E + + + D E Sbjct: 298 LPDKAID--LVDEACAVLRLQHE--SKPDEIQRLDRAIMKIQIELESLKKETDPVSIE 351 >gi|67934490|ref|ZP_00527533.1| AAA ATPase, central region:Clp, N terminal [Solibacter usitatus Ellin6076] Length = 883 Score = 59.0 bits (142), Expect = 3e-07 Identities = 23/117 (19%), Positives = 39/117 (33%), Gaps = 16/117 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PS+++ ++ EI V+ + A R Sbjct: 334 RFQTVMVGEPSVDDTIA--ILRGLKEKFEIHHGVRIKDSAILAAAVLSQRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A + L+++ +I+ LE + + E + D A Sbjct: 384 -ADRFLPDKAIDLIDEAGSALRLQIGSMPIEIDNLERRISHLEIERQALSKERDHAS 439 >gi|68195152|gb|EAN09610.1| AAA ATPase, central region:Clp, N terminal [Enterococcus faecium DO] Length = 869 Score = 58.7 bits (141), Expect = 3e-07 Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 16/127 (12%) Query: 282 LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRM 341 ++ + FQ+ P++E+ ++ EI V + A R Sbjct: 325 MEKDKALERRFQKVLVKEPTVEDTIS--ILRGLKERFEIHHGVNIHDNALVAAATLSDRY 382 Query: 342 FKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL 396 DR L DKA A +++E +++++ + + E + Sbjct: 383 I---------TDRFLPDKAIDLIDEASATIRVEMNSMPTELDQVTRRLMQLEIEEAALKK 433 Query: 397 KADEARR 403 ++D+A + Sbjct: 434 ESDDASK 440 >gi|34904048|ref|NP_913371.1| P0489G09.12 [Oryza sativa (japonica cultivar-group)] Length = 606 Score = 58.3 bits (140), Expect = 4e-07 Identities = 20/100 (20%), Positives = 31/100 (31%), Gaps = 23/100 (23%) Query: 130 ACQNLLPADDCDCDICSNKKGFCNLC--------MCVICSKFDFASNTCRWIGCDVCSHW 181 C N LP + ++ C C C IC K ++ W+ CD C W Sbjct: 513 ICGNRLPCKIASKKKQAGERLLCRHCDKLLQSKQYCGICKKIWHHTDGGNWVCCDECQIW 572 Query: 182 CHTDCAIREGLIKMGHSAKGASGMTEML---FHCIACNHT 218 H +C + M ++ + C C Sbjct: 573 VHVECD------------QTCIKMEDLENADYFCPDCKSK 600 >gi|46908440|ref|YP_014829.1| clpB protein [Listeria monocytogenes str. 4b F2365] Length = 866 Score = 58.3 bits (140), Expect = 4e-07 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ EI V + A R Sbjct: 334 RFQKVLVPEPTVEDTVS--ILRGLKERFEIHHGVNIHDNALVAAASLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A +++E +++E+ V + E + + D A Sbjct: 384 -TDRFLPDKAIDLVDEACATIRVEIDSMPSELDEVTRKVMQLEIEEAALKEEKDPASE 440 >gi|26006129|dbj|BAC41407.1| mKIAA0304 protein [Mus musculus] Length = 1744 Score = 58.3 bits (140), Expect = 5e-07 Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 22/111 (19%) Query: 123 YKRCRNIACQNLLPADDCDCDICSNKK-------GFCNLC--------MCVICSK-FDFA 166 +R R+ C + C N C C C IC++ ++ Sbjct: 344 TRRRRHWICSACVRCKSCGATPGKNWDVEWSGDYSLCPRCTELYEKGNYCPICTRCYEDN 403 Query: 167 SNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACN 216 + + C C HW H C + + ++ +L+ C C Sbjct: 404 DYESKMMQCAQCDHWVHAKCEGLSDEDYEILSGL-----PDSVLYTCGPCA 449 >gi|62639360|ref|XP_341830.2| PREDICTED: similar to mixed lineage leukemia 2 [Rattus norvegicus] Length = 3202 Score = 58.3 bits (140), Expect = 5e-07 Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 22/111 (19%) Query: 123 YKRCRNIACQNLLPADDCDCDICSNKK-------GFCNLC--------MCVICSK-FDFA 166 +R R+ C + C N C C C IC++ ++ Sbjct: 1777 TRRRRHWICSACVRCKSCGATPGKNWDVEWSGDYSLCPRCTELYEKGNYCPICTRCYEDN 1836 Query: 167 SNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACN 216 + + C C HW H C + + ++ +L+ C C Sbjct: 1837 DYESKMMQCAQCDHWVHAKCEGLSDEDYEILSGL-----PDSVLYTCGPCA 1882 >gi|23480353|gb|EAA16934.1| ClpB protein [Plasmodium yoelii yoelii] Length = 1048 Score = 58.3 bits (140), Expect = 5e-07 Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 16/113 (14%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ+ D PS++ ++ E+ V+ + A R Sbjct: 476 EKDKALERRFQQILVDQPSVDETIS--ILRGLKERYEVHHGVRILDSALVQAAILSDRYI 533 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAE 390 R L DKA A ++LK++ K Q++ +E + + E Sbjct: 534 ---------SYRFLPDKAIDLIDEAASNLKIQLSSKPIQLDNIEKQLIQLEME 577 >gi|48855282|ref|ZP_00309441.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Cytophaga hutchinsonii] Length = 871 Score = 57.9 bits (139), Expect = 5e-07 Identities = 29/198 (14%), Positives = 61/198 (30%), Gaps = 27/198 (13%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ D P+ ++ ++ E+ ++ + E R Sbjct: 322 EKDKALERRFQAVIVDEPNTQDAIS--ILRGIKEKYEVHHGIRIQDDAIIAAVELSQRYI 379 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMF--- 394 DR L DKA A L++E +++E+ + + E + Sbjct: 380 ---------SDRYLPDKAIDLMDEASAKLRIELDSMPQELDEILRRIMQLEIEREAIRRE 430 Query: 395 ---QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQEN 451 + + +R AE LK + + +Y E +A+ N Sbjct: 431 NNKEKETILSRELAELNEQKSQIMAKWQEEKRVIDGLKQAKEDID---RYKMEAEQAERN 487 Query: 452 SQCDFDPMKMRMESEIRG 469 D+ + +I+ Sbjct: 488 G--DYGKVAEIRYGKIQE 503 >gi|57898943|emb|CAI44947.1| putative HSP100 protein [Phycomyces blakesleeanus] Length = 901 Score = 57.9 bits (139), Expect = 5e-07 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 26/188 (13%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP--L 282 +K V + + E +I +D + + + ++ + + + I L Sbjct: 259 LKAVLKEVKESE--EGIILFIDEIHTVLGAGKGEGSMDAANLLKPMLARGELRCIGATTL 316 Query: 283 DACNFILM------FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE 336 I FQ+ D PS+ ++ E V+ T + V A+ Sbjct: 317 TEYKVIEKDPAFERRFQKVDVGEPSVAATIS--ILRGLKERYESYHGVKITDSALVVAAQ 374 Query: 337 EKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 R R L DKA A + +++ K +I+ LE + EA Sbjct: 375 LSDRYI---------TTRFLPDKAIDLIDEAGANTRVQLDSKPEEIDVLERKHFQLEIEA 425 Query: 392 DMFQLKAD 399 + + Sbjct: 426 MALGKEKN 433 >gi|24214579|ref|NP_712060.1| ATPase with chaperone activity, two ATP-binding domains [Leptospira interrogans serovar Lai str. 56601] Length = 860 Score = 57.9 bits (139), Expect = 6e-07 Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PS+E ++ E+ ++ + A R Sbjct: 334 RFQPVYVKEPSVEETV--TILRGLKGRYELHHGIRILDSALIAAATLSNRYI-------- 383 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A + +++E +++ ++ + E + + + D A +E Sbjct: 384 -SDRFLPDKAVDLIDEASSKMRIEIDSMPEELDRANKRIQSLKIEREALKKEQDTASKE 441 Score = 47.9 bits (113), Expect = 6e-04 Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 43/271 (15%) Query: 213 IACNHTSELFGFVKDVFQHCAPNWDFE---ALIKELDFVRKIFRGSEDARGKKLFWKADE 269 + C + L + K + + A F+ ++ I RG + ++ Sbjct: 310 LRCIGATTLKEYQKYIEKDAALERRFQPVYVKEPSVEETVTILRGLKG------RYELHH 363 Query: 270 LIEKLKSKLIDPLDACN-FILMFF---QECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 I L S LI N +I F + D + + + + + + +Q Sbjct: 364 GIRILDSALIAAATLSNRYISDRFLPDKAVDLIDEASSKMRIE-IDSMPEELDRANKRIQ 422 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAV-TDLKMERQK--KKPQIEELES 382 + E + +E+ K+ L+ E E + +E+ K + QI+E Sbjct: 423 SLKIEREALKKEQDTASKERLKTLERDLSEQEQNFQTLKARWDLEKSKIGRLKQIKEEIE 482 Query: 383 IVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL 442 + +AEA+ + E R AE +Y KL + E Sbjct: 483 KYKNLEAEAE----RRGEINRVAEI------------------RYGKLVDLQKELESAN- 519 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 EELK QE++ E +I ++ Sbjct: 520 -EELKKQESASRLLKEE--VSEEDIANIVSR 547 >gi|5123787|emb|CAB45385.1| trithorax homologue 2 [Homo sapiens] Length = 2715 Score = 57.5 bits (138), Expect = 7e-07 Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 22/107 (20%) Query: 127 RNIACQNLLPADDCDCDICSNKK-------GFCNLC--------MCVICSK-FDFASNTC 170 R+ C + C N C C C IC++ ++ Sbjct: 1293 RHWICSACVRCKSCGATPGKNWDVEWSGDYSLCPRCTQLYEKGNYCPICTRCYEDNDYES 1352 Query: 171 RWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACN 216 + + C C HW H C + + ++ +L+ C C Sbjct: 1353 KMMQCAQCDHWVHAKCEGLSDEDYEILSGL-----PDSVLYTCGPCA 1394 >gi|3150046|gb|AAC16900.1| ClpB chaperone homolog [Lactococcus lactis subsp. cremoris] Length = 867 Score = 57.5 bits (138), Expect = 7e-07 Identities = 30/188 (15%), Positives = 60/188 (31%), Gaps = 47/188 (25%) Query: 267 ADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 DE + +++ + FQ+ P++E+ ++ EI V Sbjct: 318 LDEYRKYMETD--------KALERRFQKVLVTEPTVEDTIS--ILRGLKERFEIHHGVTI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELE 381 + A R DR L DKA A +++E ++++ Sbjct: 368 HDNALIAAATLSNRYI---------TDRFLPDKAIDLIDEASATIRVEMNSLPTELDQAN 418 Query: 382 SIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY 441 + + E + + D+A ++ + +R AE R + Sbjct: 419 RRLMQLEIEEAALKKERDDASKK---------------------RLEIIRGEIAELREEN 457 Query: 442 LFEELKAQ 449 +LKAQ Sbjct: 458 --NQLKAQ 463 >gi|68381002|ref|XP_695268.1| PREDICTED: similar to Myeloid/lymphoid or mixed-lineage leukemia protein 4 (Trithorax homolog 2) [Danio rerio] Length = 812 Score = 57.5 bits (138), Expect = 8e-07 Identities = 21/113 (18%), Positives = 37/113 (32%), Gaps = 22/113 (19%) Query: 123 YKRCRNIACQNLLPADDCDCDICSN-------KKGFCNLC--------MCVICSK-FDFA 166 KR + C + C + KG C C C +C K ++ Sbjct: 262 NKRKKPWVCMTCIRCRSCGVTPGKSWDTEWNHDKGLCPDCTRLFDQGNYCTMCFKCYEDN 321 Query: 167 SNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACNHT 218 + + C C+HW H C + + L ++ S +++ C C Sbjct: 322 DYDSQMMQCSTCNHWVHAKCEGLTDDLYEILSSL-----PESVVYSCQPCLKE 369 >gi|61869994|ref|XP_582097.1| PREDICTED: similar to Myeloid/lymphoid or mixed-lineage leukemia protein 4 (Trithorax homolog 2), partial [Bos taurus] Length = 1524 Score = 57.1 bits (137), Expect = 1e-06 Identities = 18/107 (16%), Positives = 32/107 (29%), Gaps = 22/107 (20%) Query: 127 RNIACQNLLPADDCDCDICSNKK-------GFCNLC--------MCVICSK-FDFASNTC 170 R+ C + C N C C C IC++ ++ Sbjct: 694 RHWICSACVRCKSCGATPGKNWDVEWSGDYSLCPRCTQLFEKGNYCPICTRCYEDNDYES 753 Query: 171 RWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACN 216 + + C C HW H C + + ++ +L+ C C Sbjct: 754 KMMQCAQCDHWVHAKCEGLSDEDYEILSGL-----PDSVLYTCGPCA 795 >gi|7189542|gb|AAF38444.1| ATP-dependent Clp protease, subunit B [Chlamydophila pneumoniae AR39] Length = 872 Score = 57.1 bits (137), Expect = 1e-06 Identities = 47/215 (21%), Positives = 66/215 (30%), Gaps = 48/215 (22%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PSLE+ F++ EI V+ T + R Sbjct: 337 RFQPIFVTEPSLEDAV--FILRGLREKYEIFHGVRITEGALNAAVLLSYRYIP------- 387 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELES-----IVRLK----------QAE 390 DR L DKA A + ++M+ I+E E IV+ + Q E Sbjct: 388 --DRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERELAALIVKQEAIKREQSPSYQEE 445 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSK--YLKLRLSEAEERR--------- 439 AD Q D R E K ++ SE E R Sbjct: 446 ADAMQKSIDALREELASLRLGWDEEKKLISGLKEKKNSLESMKFSEEEAERVADYNRVAE 505 Query: 440 -QYLF-----EELKAQENSQCDFDPMKMRMESEIR 468 +Y EE+K E S D ++ E + R Sbjct: 506 LRYSLIPQLEEEIKQDEASLNQRDNRLLQEEVDER 540 >gi|23612849|ref|NP_704388.1| hypothetical protein [Plasmodium falciparum 3D7] Length = 1070 Score = 57.1 bits (137), Expect = 1e-06 Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 16/113 (14%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ+ + PS++ ++ E+ V+ + A R Sbjct: 478 EKDKALERRFQQILVEQPSVDETIS--ILRGLKERYEVHHGVRILDSALVQAAVLSDRYI 535 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAE 390 R L DKA A ++LK++ K Q+E +E + + E Sbjct: 536 ---------SYRFLPDKAIDLIDEAASNLKIQLSSKPIQLENIEKQLIQLEME 579 >gi|68548612|ref|ZP_00588090.1| AAA ATPase, central region [Shewanella amazonensis SB2B] Length = 516 Score = 56.7 bits (136), Expect = 1e-06 Identities = 32/176 (18%), Positives = 54/176 (30%), Gaps = 42/176 (23%) Query: 305 GEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA---- 360 G ++ E+ V+ T + A R DR+L DKA Sbjct: 3 GRPIAILRGLKERYELHHHVEITDPAIVAAASMSHRYV---------SDRKLPDKAIDLI 53 Query: 361 -CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A + ++M+ K ++ LE + E + DEA R+ Sbjct: 54 DEAASSIRMQIDSKPESLDRLERRAIQLKLEEQALAKENDEASRK--------------- 98 Query: 420 XXXYTSKYLKLRLSEAE-ERRQYLFEELKAQENS------QCDFDPMKMRMESEIR 468 + LR E E + E+ E + D + RM+ E+ Sbjct: 99 ------RLEHLRHELKEVEAKANELNEIWRTEKAALAGTQHIKADLEQARMDLEVA 148 >gi|72045520|ref|XP_797484.1| PREDICTED: similar to Ski oncogene (C-ski), partial [Strongylocentrotus purpuratus] Length = 570 Score = 56.7 bits (136), Expect = 1e-06 Identities = 36/185 (19%), Positives = 69/185 (37%), Gaps = 27/185 (14%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIF--RGSEDARGKKLFWKADELIEKLKSKLIDPL 282 KD+ H + +E++ V+K+ + D R + EL +++ + + L Sbjct: 398 TKDLEVHPEST-----MEQEIEMVKKMLLESDALDTRAGR-EKLLHEL-ARIRIRQEERL 450 Query: 283 DACNFILMFFQECDSDSPSLENGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRM 341 FQ+ E FL + +D E E + ++++ V E R Sbjct: 451 QGALAAKRNFQQ-----------EMEFLRLTKKDKIREAMESKRSLRKELDRVRIEYERK 499 Query: 342 FKKARSVLDACDRELEDKACAVTDLKMER----QKKKPQIEELESIVRLKQAEADMFQLK 397 +++ R+LE ++ E ++ Q E L+ VR E + QL+ Sbjct: 500 LRESNESRQRLKRDLELARSRRSEKSNEIGRDNERLGSQNEYLKDRVR--DLEEERDQLR 557 Query: 398 ADEAR 402 D R Sbjct: 558 RDLQR 562 >gi|50555844|ref|XP_505330.1| hypothetical protein [Yarrowia lipolytica] Length = 782 Score = 56.3 bits (135), Expect = 2e-06 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + PS+E+ ++ E+ V+ T + A R Sbjct: 253 RFQSVMVNEPSVEDAIS--ILRGLKERYEVHHGVRLTDAALVTAAVYSNRYI-------- 302 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A + L+++ + K +++ELE + E + + + D E Sbjct: 303 -SDRFLPDKAIDLVDEACSALRLQHESKPDELQELERQTVTLEIELESLREEEDPLSVE 360 >gi|50365236|ref|YP_053661.1| ATPase subunit of ATP-dependant protease [Mesoplasma florum L1] Length = 711 Score = 55.6 bits (133), Expect = 3e-06 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 24/184 (13%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + + FQ + P+++ ++ E V+ + A R Sbjct: 178 EKDSALERRFQRVMVEEPTVDQTIS--ILRGLKERFETYHGVRIHDNAIVSAANLSNRYI 235 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 DR L DKA A + +K E +++++ V + E + Sbjct: 236 ---------ADRFLPDKAIDLIDEASSTIKTELASVPTELDQVNRKVMQLEIEKSALSKE 286 Query: 398 ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLF----EELK-AQENS 452 D+ +E S++ K + + F E LK E S Sbjct: 287 KDDKSKERLAEAVKELEKTKIEQDKLASEWNKQKSQL---EKINSFKTTIENLKNELEIS 343 Query: 453 QCDF 456 Q + Sbjct: 344 QNEG 347 >gi|68479564|ref|XP_716146.1| hypothetical protein CaO19_13747 [Candida albicans SC5314] Length = 899 Score = 55.2 bits (132), Expect = 3e-06 Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 21/174 (12%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D + +++ ++ EI V+ + A+ R Sbjct: 332 RFQKIDVPAATVQETVA--ILRGIQPKYEIHHGVRILDSALVTAAQLASRYL-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ--LKADEARR 403 R L D A + + + R K +++ LE + L E + + AD A + Sbjct: 382 -TYRALPDSAVDLVDESAAAVAVARDSKPEELDTLERQLHLVDVEINALERDKDADSASK 440 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFE-ELKAQENSQC 454 E +Y + R S + ++ L E E+KAQ+ + Sbjct: 441 ERLNLAKKKKAELEEKIGPLNERYRQERASHEQLTAAKRKLDELEIKAQDAERR 494 >gi|19713201|gb|AAL94040.1| ClpB protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 864 Score = 55.2 bits (132), Expect = 4e-06 Identities = 29/193 (15%), Positives = 61/193 (31%), Gaps = 46/193 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + P++++ ++ E V+ T + A R Sbjct: 337 RFQTILVNEPNVDDTIS--ILRGLKDKFETYHGVRITDTAIVEAATLSQRYI-------- 386 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR+L DKA A ++ E ++++L + E + + D+A +E Sbjct: 387 -SDRKLPDKAIDLIDEAAAMIRTEIDSMPEELDQLTRKALQLEIEIKALEKETDDASKE- 444 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLF---------EELKAQENSQCDF 456 + + AE + E++ +N + + Sbjct: 445 --------------------RLKVIEKELAELNEEKKVLTSKWELEKEDISKIKNIKREI 484 Query: 457 DPMKMRMESEIRG 469 + +K+ ME R Sbjct: 485 ENVKLEMEKAERE 497 >gi|54035913|sp|Q9PKS5|CLPB_CHLMU Chaperone clpB Length = 867 Score = 55.2 bits (132), Expect = 4e-06 Identities = 54/291 (18%), Positives = 87/291 (29%), Gaps = 89/291 (30%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLF-WKADELIEKLKSKLIDPLDACNFIL-- 289 A + L V K SE LF + L+ +DA N + Sbjct: 246 AGAKYRGEFEERLKSVLKGVEASEG--ACILFIDEVHTLVGA--GATDGAMDAANLLKPA 301 Query: 290 ----------------------------MFFQECDSDSPSLENGEGGFLIAPQDACNEIA 321 FQ PSLE+ F++ EI Sbjct: 302 LARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAV--FILRGLREKYEIF 359 Query: 322 EVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQ 376 V+ T + R DR L DKA A + ++M+ Sbjct: 360 HGVRITEGALNAAVVLSYRYI---------TDRFLPDKAIDLIDEAASLIRMQIGSLPLP 410 Query: 377 IEELES-----IVR---LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYL 428 I+E E IV+ +K+ +A +Q +A+E ++ + + Sbjct: 411 IDEKERELSALIVKQEAIKREQAPAYQEEANEMQKAIDRVK---------------EELA 455 Query: 429 KLRLSEAEE--------RRQYLFEELK-AQENSQCDFDPMKMRMESEIRGL 470 LRL EE ++ E LK A+E ++ D + + L Sbjct: 456 ALRLRWDEEKGLIAGLKEKKNSLENLKFAEEEAERTAD------YNRVAEL 500 >gi|33944507|ref|XP_340401.1| mitochondrial heat shock protein 78, putative [Trypanosoma brucei] Length = 812 Score = 54.8 bits (131), Expect = 5e-06 Identities = 30/168 (17%), Positives = 54/168 (32%), Gaps = 35/168 (20%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E ++ E + A R + Sbjct: 268 RFQSVLVTEPTVEETIS--VLRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLSE------ 319 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEEL-ESIVRLKQAEADMFQLKADEARRE 404 R L DKA A + L+++++ K Q++ + +VRLK EA+ + DE + Sbjct: 320 ---RRLPDKAIDLIDEAASRLRLQQESKPEQLDSVGRELVRLK-IEAEAVKKDKDELGK- 374 Query: 405 AEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL----FEELKA 448 Y + + +A E R F+ +K Sbjct: 375 ------------AKLTQLYNRIEERQKEYDALEERWKKEKAMFDRIKK 410 >gi|47225576|emb|CAG12059.1| unnamed protein product [Tetraodon nigroviridis] Length = 1216 Score = 54.4 bits (130), Expect = 7e-06 Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 16/77 (20%) Query: 131 CQNLLPADDC------DCDICSN-KKGFCNLCM--------CVICSK-FDFASNTCRWIG 174 C + C DI N +KG C C C IC K ++ + + Sbjct: 1036 CMTCIRCKSCGVTPGKSWDIEWNHEKGLCQDCSKLFEMGNYCPICFKCYEDNDYDSQMMQ 1095 Query: 175 CDVCSHWCHTDCAIREG 191 C C+HW H C Sbjct: 1096 CGTCNHWVHAKCEDLTE 1112 >gi|68178655|ref|ZP_00551766.1| IMP dehydrogenase/GMP reductase:AAA ATPase, central region:Clp, N terminal [Desulfuromonas acetoxidans DSM 684] Length = 866 Score = 54.0 bits (129), Expect = 7e-06 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E+ V+ + + A R + Sbjct: 336 RFQPVMVTQPTVEDSIS--ILRGLKERFEVHHGVKIQDQALVAAATLSQRYISE------ 387 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R L DKA A ++ E ++ V + E + D A +E Sbjct: 388 ---RFLPDKAIDLVDEACAMVRTEIDSMPAAMDTAARRVMQLEIEEAALVKEKDAASKE 443 >AAA_Q8X1A0_131-325_PF00004.17 Length = 195 Score = 54.0 bits (129), Expect = 8e-06 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + A+ R Sbjct: 132 RFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVKILDSAIIAAAKMSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 182 -TDRQLPDKA 190 >AAA_CLPB_202-401_PF00004.17 Length = 200 Score = 54.0 bits (129), Expect = 8e-06 Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E V+ T + A+ R Sbjct: 132 RFQQVYVGEPSVEDTVA--ILRGLRERYEAHHKVRITDSALVAAAQLSHRYI-------- 181 Query: 351 ACDRELEDKA 360 R+L DKA Sbjct: 182 -TGRQLPDKA 190 >gi|71661302|ref|XP_817674.1| ATP-dependent Clp protease subunit, heat shock protein 78, putative [Trypanosoma cruzi] Length = 802 Score = 54.0 bits (129), Expect = 8e-06 Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 18/119 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E ++ E + A R Sbjct: 258 RFQSVLVTEPTVEETIS--VLRGIKEKYEAHHGCLIKDEALVYAAVNSHRYL-------- 307 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELES-IVRLKQAEADMFQLKADEARR 403 DR L DKA A + L+++++ K Q++ +E +VRLK E + + DE + Sbjct: 308 -SDRRLPDKAIDLIDEAASRLRLQQESKPEQLDSVERELVRLK-IEVEAVKKDKDELGK 364 >gi|29029074|gb|AAO64916.1| At5g53430 [Arabidopsis thaliana] Length = 1043 Score = 54.0 bits (129), Expect = 8e-06 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 10/87 (11%) Query: 132 QNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREG 191 + L+P D C CS +C IC + ++ W+ CD C W H+ C Sbjct: 393 KALIPGDQLLCQPCSKLTK--PKHVCGICKRIWNHLDSQSWVRCDGCKVWIHSACD---- 446 Query: 192 LIKMGHSAKGASGMTEMLFHCIACNHT 218 S K + E ++C C Sbjct: 447 ----QISHKHFKDLGETDYYCPTCRTK 469 >gi|70800165|gb|AAZ10006.1| serine peptidase, putative [Leishmania major strain Friedlin] Length = 817 Score = 54.0 bits (129), Expect = 1e-05 Identities = 35/201 (17%), Positives = 62/201 (30%), Gaps = 34/201 (16%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E ++ E + A R + Sbjct: 274 RFQSVLVTEPTVEETIS--ILRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLSE------ 325 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A + L+++++ K ++ +E + + EA+ + DE +E Sbjct: 326 ---RRLPDKAIDLIDEAASRLRLQQESKPEALDLIERELIRLKIEAEAVKKDKDEVGKEK 382 Query: 406 EXXXXXXXXXXXXXXXXYTSKYL---------KLRLSEAEERRQYLFEELKAQENSQCDF 456 ++ K R E + R +L E + Sbjct: 383 LENLYEQISQKQKEYDALEERWKKEKNLFQTIKQRTEELDVLRHHL-------EQAMNSG 435 Query: 457 DPMKM--RMESEIRGLLKGME 475 D K S+I LLK +E Sbjct: 436 DFAKAGEIQHSQIPNLLKQIE 456 >gi|20808693|ref|NP_623864.1| ATPases with chaperone activity, ATP-binding subunit [Thermoanaerobacter tengcongensis MB4] Length = 816 Score = 53.7 bits (128), Expect = 1e-05 Identities = 43/188 (22%), Positives = 66/188 (35%), Gaps = 47/188 (25%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + P++E ++ E V+ T +E A+ R Sbjct: 335 RFQPIMVEEPTVEETI--EILKGLRDKYEAHHRVKITDEALEAAAKLSHRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVR--LKQAEADMFQLKADEARR 403 DR L DKA A + ++++ P+I+ELE + +K+ E EA R Sbjct: 385 -TDRFLPDKAIDLIDEAASRVRLKTVTAPPEIKELEDKINDLIKEKE---------EAIR 434 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRM 463 E K K+R E + R Q EELKA + Q K Sbjct: 435 TQEY-----------------EKAAKIRDEEQKLREQ--LEELKA-KWQQNSLSEEKSVG 474 Query: 464 ESEIRGLL 471 EI ++ Sbjct: 475 PEEIAQVV 482 >gi|17979454|gb|AAL50064.1| At2g25140/F13D4.100 [Arabidopsis thaliana] Length = 964 Score = 53.7 bits (128), Expect = 1e-05 Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E+ V + + A R Sbjct: 413 RFQQVLCVQPSVEDTIS--ILRGLRERYELHHGVTISDSALVSAAVLADRYI-------- 462 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 +R L DKA A LKME K +++ ++ V + E + D+A +E Sbjct: 463 -TERFLPDKAIDLVDEAGAKLKMEITSKPTELDGIDRAVIKLEMEKLSLKNDTDKASKE 520 >gi|50288205|ref|XP_446531.1| unnamed protein product [Candida glabrata] Length = 908 Score = 53.7 bits (128), Expect = 1e-05 Identities = 33/174 (18%), Positives = 62/174 (35%), Gaps = 13/174 (7%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++ ++ EI V+ + ++ R R L Sbjct: 334 RFQKIDVQEPTIRQTVA--ILRGLQPKYEIHHGVRILDSALVTASQLAKRYLPYRR--LP 389 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXX 410 +L D +CA + + R K +++ E ++L Q E +KA E ++A+ Sbjct: 390 DSAIDLVDISCAG--VAVARDSKPEELDSKERQLQLLQVE-----IKALERDKDADCTTK 442 Query: 411 XXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRME 464 + LR EER+ + EEL + + + + E Sbjct: 443 DRLKQAKKREASLIEELEPLRQRYNEERKGH--EELTKLKKKLDELENKALDAE 494 >AAA_Q5NE82_201-395_PF00004.17 Length = 195 Score = 53.3 bits (127), Expect = 2e-05 Identities = 26/154 (16%), Positives = 42/154 (27%), Gaps = 46/154 (29%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLF-WKADELIEKLKSKLIDPLDACNFIL------- 289 + L V K S+ LF + ++ K +DA N + Sbjct: 52 RGDFEERLKSVLKEL--SKQEGNVILFIDELHTMVGA--GKAEGSMDAGNMLKPALARGE 107 Query: 290 -----------------------MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 FQ+ D P++E+ ++ E+ V Sbjct: 108 LKCVGATTLDEYREYVEKDPALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHGVNI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKA 360 T + A R DR+L DKA Sbjct: 166 TDSAIVSAATLSHRYI---------TDRQLPDKA 190 >gi|53801462|gb|AAU93933.1| plastid clpB [Helicosporidium sp. ex Simulium jonesii] Length = 195 Score = 52.9 bits (126), Expect = 2e-05 Identities = 34/159 (21%), Positives = 48/159 (30%), Gaps = 31/159 (19%) Query: 310 LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVT 364 ++ EI V+ + A+ R DR L DKA A Sbjct: 4 ILRGLRERYEIHHGVRIADSALVEAAQLSDRYI---------ADRFLPDKAIDLVDEAAA 54 Query: 365 DLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYT 424 LKME K ++EL+ V + E Q A R A Sbjct: 55 KLKMEITSKPAPLDELDRRVLQLEMERLSVQKAAPHDRGAAARLSALVA----------- 103 Query: 425 SKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRM 463 L EA+ R+Q L E + + +K M Sbjct: 104 ------SLEEAKRRQQELTVEWEKEREELRGVQRLKEEM 136 >AAA_Q5X4G2_201-395_PF00004.17 Length = 195 Score = 52.9 bits (126), Expect = 2e-05 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ T + A R Sbjct: 132 RFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVEITDPALVAAAMLSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 182 -SDRQLPDKA 190 >gi|55631422|ref|XP_520008.1| PREDICTED: plectin 1 [Pan troglodytes] Length = 5175 Score = 52.9 bits (126), Expect = 2e-05 Identities = 40/231 (17%), Positives = 76/231 (32%), Gaps = 40/231 (17%) Query: 253 RGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQE-----CDSDSPSLENGEG 307 R E R ++ ++ + ++ A Q + +++ + Sbjct: 2261 RAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQ 2320 Query: 308 GFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA-----RSVLDACDRELEDKACA 362 I + + + A+ + A E+ R+ + R L+A +R+ A Sbjct: 2321 KRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEATERQR---GGA 2377 Query: 363 VTDLKMERQK-------KKPQIEELESIVRLKQAEADMF-QLKADEARR---EAEXXXXX 411 +L+ R + K+ EE E + R Q E+ Q +A+ A R EAE Sbjct: 2378 EGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELASRVKAEAEAAREK 2437 Query: 412 XXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK-------AQENSQCD 455 +LRL E R+ E++ A E +Q Sbjct: 2438 QRALQA---------LEELRLQAEEAERRLRQAEVERARQVQVALETAQRS 2479 Score = 51.7 bits (123), Expect = 4e-05 Identities = 46/240 (19%), Positives = 91/240 (37%), Gaps = 24/240 (10%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFF 292 E +EL+ R++ G+ R L + + + + +++ + Sbjct: 2588 QAVRQRELAEQELEKQRQLAEGTAQQR---LAAEQELIRLRAETEQGE---------QQR 2635 Query: 293 QECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDAC 352 Q + + L+ Q+ E+A+V +MEV+ K R +++RS + Sbjct: 2636 QLLEEELARLQREAAAATQKRQELEAELAKV----RAEMEVLLASKARAEEESRSTSEKS 2691 Query: 353 DRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXX 412 + LE +A +L E + + EE + + + AE D + +A+ R AE Sbjct: 2692 KQRLEAEAGRFRELAEEAARLRALAEEAKR--QRQLAEEDAARQRAEAERVLAEKLAAIS 2749 Query: 413 XXXXXXXXXXYTSKY-----LKL-RLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESE 466 K +L RL+E E ++ EE AQ + + ++R S+ Sbjct: 2750 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKASD 2809 Score = 44.4 bits (104), Expect = 0.007 Identities = 38/195 (19%), Positives = 73/195 (37%), Gaps = 15/195 (7%) Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 FI + + + E ++ E+ ++ + E A+ K + ++A Sbjct: 2241 KFISETLRRMEEEERLAEQQRA----EERERLAEVEAALEKQRQLAEAHAQAKAQAEREA 2296 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE--ADMFQLKADE--- 400 + + E+ + A D + +QK+ Q EEL+ + + +AE A Q +A E Sbjct: 2297 KELQQRMQEEVVRREEAAVDAQ--QQKRSIQ-EELQQLRQSSEAEIQAKARQAEAAERSR 2353 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTS---KYLKLRLSEAEERRQYLFEELKAQENSQCDFD 457 R E E + L+ R EAE +++ EE + D Sbjct: 2354 LRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDES 2413 Query: 458 PMKMRMESEIRGLLK 472 K + E+E+ +K Sbjct: 2414 QRKRQAEAELASRVK 2428 Score = 38.6 bits (89), Expect = 0.32 Identities = 47/286 (16%), Positives = 89/286 (31%), Gaps = 56/286 (19%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP----LDACNFI 288 A + +E+ VR +E RG + L + + +A Sbjct: 2348 AAERSRLRIEEEIRVVRLQLEATERQRGGA-EGELQALRARAEEAEAQKRQAQEEAER-- 2404 Query: 289 LMFFQECDSDSPSLENGE-GGFLIAPQDACNEIAEVVQDT--ARKMEVVAEEKMRMFKKA 345 L + +S E + A +A E +Q R AE ++R + Sbjct: 2405 LRRQVQDESQRKRQAEAELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVE 2464 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA-------------- 391 R+ E + A +L+ +R + +LE ++ + Sbjct: 2465 RARQVQVALETA-QRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQ 2523 Query: 392 --------------DMFQLKADEA---RREAEXXXXXXXXXXXXXXXXYT---------- 424 + +QLKA+EA R +AE Sbjct: 2524 AEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRG 2583 Query: 425 ---SKYLKLR-LSEAEERRQYLFEELKAQENSQCDFDPMKMRMESE 466 + ++ R L+E E +Q E AQ+ + + +++R E+E Sbjct: 2584 KAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETE 2629 >gi|47568371|ref|ZP_00239072.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus cereus G9241] Length = 866 Score = 52.9 bits (126), Expect = 2e-05 Identities = 20/119 (16%), Positives = 41/119 (34%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ ++ P++E+ ++ EI V R + + R Sbjct: 335 RFQQVLAEEPTVEDTIS--ILRGLKERFEIYHGVNIHDRAIVAASVLSDRYI-------- 384 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DK+ A ++ E +++E+ + + E + D +E Sbjct: 385 -SDRFLPDKSIDLVDEACATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQE 442 >gi|68562872|ref|ZP_00602103.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Rubrobacter xylanophilus DSM 9941] Length = 886 Score = 52.9 bits (126), Expect = 2e-05 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 17/121 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PS+E ++ E V+ + + AE R Sbjct: 410 RFQPVLVSEPSVEETV--EILTGLKDRYEAHHGVKISEEAIVAAAELSDRYI-------- 459 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A +K+ + K E+E ++ Q E D + A++ RR Sbjct: 460 -TDRFLPDKAIDLMDQAAARVKLRSRTKPEDAREIEEEIKKLQREKDR-AVSAEDYRRAQ 517 Query: 406 E 406 E Sbjct: 518 E 518 >gi|57505852|ref|ZP_00371777.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter upsaliensis RM3195] Length = 857 Score = 52.9 bits (126), Expect = 2e-05 Identities = 28/122 (22%), Positives = 46/122 (37%), Gaps = 19/122 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + PS+ E ++ EI V T + A+ R Sbjct: 332 RFQPVSVNEPSIN--EALAMLRGIKEKLEIHHNVSITDSALVAAAKLSKRYIN------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEAD---MFQLKADEAR 402 DR L DKA A +LKM+ + + + ++ + + E + M Q +A+E R Sbjct: 383 --DRFLPDKAIDLIDEAAAELKMQIESEPSSLRKVRKELETLEVEKEALKMEQNEANEKR 440 Query: 403 RE 404 E Sbjct: 441 LE 442 >gi|71401304|ref|XP_803323.1| ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100), putative [Trypanosoma cruzi] Length = 603 Score = 52.5 bits (125), Expect = 2e-05 Identities = 29/172 (16%), Positives = 59/172 (34%), Gaps = 19/172 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 F PS++ ++ E VQ T + V + R Sbjct: 331 RFMPVYVTEPSVDECIS--ILRGLKERYETHHGVQITDNAVVVAVQLADRYI-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL-KADEARRE 404 R + DKA A +++++ + +I++LE R + EA + K +++ +E Sbjct: 381 -TGRFMPDKAIDLIDEACANVRVQLSSRPEEIDQLERKKRQLEIEAKALERDKKEKSSQE 439 Query: 405 AEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQC 454 ++Y + R+ E E + L E+ E ++ Sbjct: 440 RLRIVKGDIQRVEELLQPLLARYNEERQRVDELHEMQTRLDEKKTKLERAER 491 >gi|62998570|gb|AAF01451.2| HSP100 [Pleurotus sajor-caju] Length = 902 Score = 52.1 bits (124), Expect = 3e-05 Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 6/114 (5%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 F + + PS+ ++ E+ V+ + A R R L Sbjct: 355 RFAQVLVNEPSVLETIS--ILRGIREKYEVHHGVRILDGALIQAATLAHRYLTSRR--LP 410 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 +L D+ACA +++ R+ + I++L+ + E + + D A +E Sbjct: 411 DAAIDLVDEACA--SVRVNRETEPEAIDKLQRKRLELEIEIHALEREKDAASKE 462 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 52.1 bits (124), Expect = 3e-05 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ EI V T + A R Sbjct: 132 RFQKVFVDEPSVEDTIA--ILRGLKERYEIHHHVDITDPAIVAAATLSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 182 -SDRQLPDKA 190 >gi|29570852|gb|AAO73810.2| heat shock protein CLPA [Paracoccidioides brasiliensis] Length = 926 Score = 52.1 bits (124), Expect = 3e-05 Identities = 27/173 (15%), Positives = 51/173 (29%), Gaps = 19/173 (10%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++ ++ E+ V + A R Sbjct: 354 RFQQVLVKEPTVGETIS--ILRGLKERYEVHHGVNILDGAIVSAANLASRYL-------- 403 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L D A A +++ R+ + ++ LE R Q E + D A + Sbjct: 404 -TARRLPDSAVDLIDEAAAAVRVTRESQPEALDTLERRARQLQIEIHALAREKDAASKAR 462 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYL-FEELKAQENSQCD 455 KY K R + ++ + L ++K E ++ Sbjct: 463 LEAAKQEAANVNEELRPLREKYESEKQRSKDIQDAKIKLDLLKVKRDEATRSG 515 >gi|34904046|ref|NP_913370.1| P0489G09.11 [Oryza sativa (japonica cultivar-group)] Length = 970 Score = 52.1 bits (124), Expect = 3e-05 Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 23/100 (23%) Query: 130 ACQNLLPADDCDCDICSNKKGFCNLC--------MCVICSKFDFASNTCRWIGCDVCSHW 181 +C N +P + ++ C C C IC K ++ W+ CD C W Sbjct: 452 SCGNRVPPKIAKKKKQAGEQLLCRHCDKLLQSKQYCGICKKIWHHTDGGNWVCCDECQIW 511 Query: 182 CHTDCAIREGLIKMGHSAKGASGMTEML---FHCIACNHT 218 H +C + M ++ + C C Sbjct: 512 VHVECDL------------TCINMEDLENADYFCPDCKSK 539 >gi|15425870|gb|AAK97626.1| heat shock protein 78 [Candida albicans] Length = 812 Score = 52.1 bits (124), Expect = 3e-05 Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 F + P+ E+ ++ E+ V+ + A R Sbjct: 259 RFSPVTVNEPTGEDTIS--ILRGLKERYEVHHGVRIMDSALVTAALYSNRYI-------- 308 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A + L+++ + + I L+ + + E + + + D+ + Sbjct: 309 -TDRFLPDKAIDLVDEASSTLRLQHESRPDAIATLDRQIMTIEIELESLRKEEDQLSID 366 >AAA_CLPB_200-394_PF00004.17 Length = 195 Score = 51.7 bits (123), Expect = 4e-05 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ EI VQ T + A R Sbjct: 132 RFQKVFVGEPTVEDTIA--ILRGLKERYEIHHHVQITDPAIVAAATLSHRYV-------- 181 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 182 -SDRQLPDKA 190 >gi|57222826|gb|AAW40870.1| heat shock protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 898 Score = 51.7 bits (123), Expect = 4e-05 Identities = 30/174 (17%), Positives = 61/174 (35%), Gaps = 25/174 (14%) Query: 245 LDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFILMFFQEC 295 +D + I G + + G ++ + K K+I ++ + F + Sbjct: 288 IDEIHLIMAGKDSSGGMDAANLLKPMLARGKLKVIGATTLNEYREYIEKDSAFERRFAQV 347 Query: 296 DSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRE 355 D PS+ + ++ E V+ + + A+ + R Sbjct: 348 IVDEPSVPDTVA--IMRGIREKYETHHGVRIMDSALVLAAQLAKQYL---------TARR 396 Query: 356 LEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 L D A A + +K+ R+ + I+ELE + E + + DEA +E Sbjct: 397 LPDSAIDLLDEAASAVKVARETRPEAIDELERKKLGLEVEIHALEREKDEASKE 450 >AAA_Q5E7D5_201-395_PF00004.17 Length = 195 Score = 51.7 bits (123), Expect = 4e-05 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ EI V+ T + A R Sbjct: 132 RFQKVLVDEPTVEDTVA--ILRGLKERYEIHHHVEITDPAIVAAASLSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 182 -SDRQLPDKA 190 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 51.3 bits (122), Expect = 5e-05 Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E V+ T + A R Sbjct: 132 RFQPVFVGEPNVEDTVA--ILRGLKPRYESHHGVRITDSALVAAANLSDRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -ADRFLPDKA 190 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 51.0 bits (121), Expect = 7e-05 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P +E ++ E+ V+ T + AE R Sbjct: 132 RFQKVLVDEPGVEATIA--ILRGLQEKYELHHGVEITDPAIVAAAELSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -TDRFLPDKA 190 >AAA_Q5NYD0_201-395_PF00004.17 Length = 195 Score = 51.0 bits (121), Expect = 7e-05 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V T + AE R Sbjct: 132 RFQKVLVDEPSVESTIA--ILRGLQEKYELHHGVDITDPAIVAAAELSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -TDRFLPDKA 190 >AAA_CLPB1_203-399_PF00004.17 Length = 197 Score = 51.0 bits (121), Expect = 7e-05 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+++ ++ E+ V+ T + A R + Sbjct: 134 RFQQVYVKQPSVDDTIS--ILRGLKEKYEVHHGVKITDSALVAAATLSHRYIQ------- 184 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 185 --DRFLPDKA 192 >gi|29840383|ref|NP_829489.1| ATP-dependent Clp protease, subunit B [Chlamydophila caviae GPIC] Length = 864 Score = 51.0 bits (121), Expect = 7e-05 Identities = 40/180 (22%), Positives = 60/180 (33%), Gaps = 28/180 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PSLE+ F++ EI V+ T + R Sbjct: 331 RFQPIFVTEPSLEDAV--FILRGLREKYEIFHGVRITEGALNAAVLLSYRYIP------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A + ++M+ I+E K+ E +K + +RE Sbjct: 382 --DRFLPDKAIDLIDEAASLIRMQIGSLPLPIDE-------KERELAALIVKQEAIKREK 432 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + LRL EE++ L LK ++NS + MK E Sbjct: 433 APSYQEEAAAMQQSIEQLKEELAALRLRWDEEKK--LITGLKEKKNS---LENMKFSEEE 487 >gi|23612374|ref|NP_703954.1| SET-domain protein, putative [Plasmodium falciparum 3D7] Length = 6761 Score = 51.0 bits (121), Expect = 7e-05 Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 26/118 (22%) Query: 115 SSLIEIFLYKRCRNIACQNLLPADDCD----CDICSNKKGFCNLCM------------CV 158 ++ +I+L+ N C + L + C+ C I N+ C C+ Sbjct: 1710 PNVPDIYLF----NWKCDDCLKCNKCNYSNLCYINYNEWELHLDCCINCYKEYEKKNFCI 1765 Query: 159 ICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACN 216 +C++ ++ +W+ CDVC W H C + + + + + + C C+ Sbjct: 1766 MCNEKYDEDDSKKWVQCDVCKFWIHLSCD--KNESRNIETLSNKN----IDYKCPTCS 1817 >gi|34482740|emb|CAE09740.1| CLP PROTEASE ATP-BINDING SUBUNIT [Wolinella succinogenes] Length = 857 Score = 51.0 bits (121), Expect = 7e-05 Identities = 32/188 (17%), Positives = 67/188 (35%), Gaps = 39/188 (20%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + P++ E ++ E V + A+ R Sbjct: 331 RFQPIFLNEPTIN--EALQILRGIKERLEAHHNVTIYDSALVAAAKLSSRYI-------- 380 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A +LKM+ + + ++ ++ ++ + E + ++ + EA Sbjct: 381 -TDRYLPDKAIDLIDEAAAELKMQIESEPTELSLIKRQIQRLEVEKEALLMEKESTHSEA 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMK----- 460 K ++ L A+ER++ L + + ++ + +K Sbjct: 440 RI------------------KEIQAELENAKERQRTLLAQFENEKAVFNEIASIKAKADE 481 Query: 461 MRMESEIR 468 +R ESE+ Sbjct: 482 LRRESELA 489 >gi|56784088|dbj|BAD81417.1| putative trithorax 3 [Oryza sativa (japonica cultivar-group)] Length = 991 Score = 51.0 bits (121), Expect = 7e-05 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 8/67 (11%) Query: 130 ACQNLLPADDCDCDICSNKKGFCNLC--------MCVICSKFDFASNTCRWIGCDVCSHW 181 +C N +P + ++ C C C IC K ++ W+ CD C W Sbjct: 344 SCGNRVPPKIAKKKKQAGEQLLCRHCDKLLQSKQYCGICKKIWHHTDGGNWVCCDECQIW 403 Query: 182 CHTDCAI 188 H +C + Sbjct: 404 VHVECDL 410 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 51.0 bits (121), Expect = 8e-05 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS E+ ++ E+ V T + A+ R Sbjct: 132 RFQKVLVDEPSEEDTIA--ILRGLKERYEVHHGVSITDGAIIAAAKLSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 182 -TDRQLPDKA 190 >AAA_CLPB1_203-397_PF00004.17 Length = 195 Score = 51.0 bits (121), Expect = 8e-05 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V+ + + A R Sbjct: 132 RFQQVFVDQPTVEDTIS--ILRGLKERYEVHHGVRISDNALVAAAVLSTRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -SDRFLPDKA 190 >PHD_Q5TTZ4_684-743_PF00628.16 Length = 60 Score = 50.6 bits (120), Expect = 8e-05 Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 7/64 (10%) Query: 156 MCVICSK-FDFASNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCI 213 C +C K ++ + + C C W H C + + M + F C Sbjct: 1 YCPLCQKCYEDNDFDLKMMECGDCRRWVHARCEGLTDEQYNMLSVL-----PENIEFVCK 55 Query: 214 ACNH 217 C Sbjct: 56 KCAK 59 >gi|23481616|gb|EAA17840.1| Bromodomain, putative [Plasmodium yoelii yoelii] Length = 4805 Score = 50.6 bits (120), Expect = 8e-05 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 34/125 (27%) Query: 115 SSLIEIFLYKRCRNIACQNLLPADDCD----CDICSNKKGFCNLCM------------CV 158 ++ +I+L+ N C + L CD C I N+ C C+ Sbjct: 1385 PNVPDIYLF----NWKCDDCLKCSKCDYSNLCFINYNEWELHLDCCINCYKEYEKKNFCI 1440 Query: 159 IC---SKFDFASNTCRWIGCDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIA 214 IC K D ++ +W+ CDVC W H C + I+ + + C Sbjct: 1441 ICNEKYKVDDSN---KWVECDVCKFWIHLSCDKDEDRNIETLAIKH-------INYKCPT 1490 Query: 215 CNHTS 219 C S Sbjct: 1491 CRSGS 1495 >gi|68175940|ref|ZP_00549169.1| AAA ATPase, central region:Clp, N terminal [Frankia sp. CcI3] Length = 880 Score = 50.6 bits (120), Expect = 9e-05 Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 24/142 (16%) Query: 267 ADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 +E +++S DP A FQ + PS+ + ++ EI V+ Sbjct: 325 LEEYRRQIES---DPAFA-----RRFQTVIINEPSVADTIS--ILRGLRGRLEIFHGVRI 374 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELE 381 + A R DR L DKA A L+ + ++E+ Sbjct: 375 ADAALVSAAVLSHRYI---------SDRFLPDKAIDLVDEAGAMLRTDIDSMPTGLDEIT 425 Query: 382 SIVRLKQAEADMFQLKADEARR 403 V + E ++D A Sbjct: 426 RRVVRLEIEEAALAQESDPASI 447 >AAA_CLPB1_203-398_PF00004.17 Length = 196 Score = 50.6 bits (120), Expect = 9e-05 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+EN ++ E+ V+ + + A R Sbjct: 133 RFQQVYVDQPSVENTIS--ILRGLKERYEVHHNVKISDSALVAAATLSARYI-------- 182 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 183 -ADRFLPDKA 191 >AAA_CLPB2_203-397_PF00004.17 Length = 195 Score = 50.6 bits (120), Expect = 9e-05 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + + A R Sbjct: 132 RFQQVYVDQPSVEDTIS--ILRGLKERYEVHHGVKISDSSLVAAATLSSRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -SDRFLPDKA 190 >gi|49655876|emb|CAG88481.1| unnamed protein product [Debaryomyces hansenii CBS767] Length = 801 Score = 50.2 bits (119), Expect = 1e-04 Identities = 21/117 (17%), Positives = 43/117 (36%), Gaps = 16/117 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 F + P++++ ++ E+ V+ T + A R Sbjct: 263 RFSAVTVNEPTVQDTIS--ILRGLKERYEVHHGVRITDGALVTSALYSSRYI-------- 312 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A + L+++ + K I +L+ + Q E + + + D+ Sbjct: 313 -TDRFLPDKAIDLVDEACSTLRLQHESKPDAIAQLDRQIMTIQIELESLRKEDDQLS 368 >gi|73974720|ref|XP_857253.1| PREDICTED: similar to plectin 1 isoform 1 isoform 6 [Canis familiaris] Length = 4691 Score = 50.2 bits (119), Expect = 1e-04 Identities = 47/240 (19%), Positives = 91/240 (37%), Gaps = 24/240 (10%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFF 292 E +EL+ R++ G+ R L + + + + +++ + Sbjct: 1826 QAVRQRELAEQELEKQRQLAEGTAQQR---LVAEQELIRLRAETEQGE---------QQR 1873 Query: 293 QECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDAC 352 Q + + L+ Q+ E+A+V +MEV+ K R +++RS + Sbjct: 1874 QLLEEELARLQREAAAATHKRQELEAELAKV----RAEMEVLLASKARAEEESRSTSEKS 1929 Query: 353 DRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXX 412 + LE +A +L E + + EE + + + AE D + +A+ R AE Sbjct: 1930 KQRLEAEASRFRELAEEAARLRALAEETKR--QRQLAEEDAARQRAEAERVLAEKLAAIS 1987 Query: 413 XXXXXXXXXXYTSKY-----LKL-RLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESE 466 K +L RL+E E ++ EE AQ + + ++R SE Sbjct: 1988 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKASE 2047 Score = 40.9 bits (95), Expect = 0.078 Identities = 37/191 (19%), Positives = 71/191 (37%), Gaps = 15/191 (7%) Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 FI + + + E ++ E+ ++ + E A+ K + ++A Sbjct: 1479 KFIRETLRRMEEEERLAEQQRA----EERERLAEVEAALEKQRQLAEAHAQAKAQAEREA 1534 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE--ADMFQLKADE--- 400 + E+ + A D + +QK+ Q EEL+ + + +AE A Q++A E Sbjct: 1535 EELQRRMQEEVARREEAAVDAQ--QQKRSIQ-EELQHLRQSSEAEIQAKARQVEAAERSR 1591 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTS---KYLKLRLSEAEERRQYLFEELKAQENSQCDFD 457 R E E + L+ R EAE +++ EE + D Sbjct: 1592 VRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDES 1651 Query: 458 PMKMRMESEIR 468 K + E+E+ Sbjct: 1652 QRKRQAEAELA 1662 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 50.2 bits (119), Expect = 1e-04 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ EI + T + AE R Sbjct: 132 RFQKVLVGEPSVEDTIA--ILRGLQERYEIHHGIDITDPAIVAAAELSDRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -TDRFLPDKA 190 >AAA_CLPB_193-386_PF00004.17 Length = 194 Score = 50.2 bits (119), Expect = 1e-04 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PSLE ++ E+ V+ + + A+ R Sbjct: 131 RFQPVFVDEPSLEETVS--ILRGIKEKYEVHHGVRISDPALIAAAQLSHRYI-------- 180 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 181 -ADRKLPDKA 189 >AAA_Q5H380_238-432_PF00004.17 Length = 195 Score = 49.8 bits (118), Expect = 1e-04 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ + V+ T + A R Sbjct: 132 RFQKVFVGEPTVEDTIA--ILRGLKERYAVHHGVEITDPAIVAAATLSNRYI-------- 181 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 182 -TDRQLPDKA 190 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 49.8 bits (118), Expect = 2e-04 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++E+ ++ E+ V+ T + A R Sbjct: 132 RFQKVLVDEPTVEDTVA--ILRGLKERYELHHHVEITDPAIVAAASLSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 182 -SDRQLPDKA 190 >gi|61815938|ref|XP_599963.1| PREDICTED: similar to CDC42-binding protein kinase beta, partial [Bos taurus] Length = 1388 Score = 49.4 bits (117), Expect = 2e-04 Identities = 47/247 (19%), Positives = 90/247 (36%), Gaps = 36/247 (14%) Query: 225 VKDVFQHCAPNWDFEALI-KELDFVRKI---------FRGSEDARGKKLFWK----ADEL 270 ++ Q A L + L+ RK+ GS G K +E Sbjct: 892 LEASLQVEAYERRIRRLEQERLELSRKLQESTQTVQSLHGSARTLGGAARDKEIKRLNEE 951 Query: 271 IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAE-VVQDTAR 329 IE+LK+K+ D Q D+ + E+ + + + + +D + Sbjct: 952 IERLKNKIADSSRLER------QLEDTVTLRQEHEDSAQRLKGLEKQYRVVRQEKEDLHK 1005 Query: 330 KMEVVAE---EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR- 385 ++ +E + R K A +E + + +L+ ++QK Q+ + E V Sbjct: 1006 QLIEASERLKSQARELKDAHQQRKLALQEFSELNERMAELRSQKQKVSRQLRDREEEVEA 1065 Query: 386 -LKQAEA-DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLF 443 +++ +A +AD+ R+E E SK KLR +E + + Sbjct: 1066 AMQKIDALRQEVRRADKGRKELEVQLEDAVAE--------ASKERKLR-EHSENFSKQVE 1116 Query: 444 EELKAQE 450 EL+A + Sbjct: 1117 SELEALK 1123 >gi|68070837|ref|XP_677332.1| SET-domain protein, putative [Plasmodium berghei] Length = 1439 Score = 49.4 bits (117), Expect = 2e-04 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 20/94 (21%) Query: 115 SSLIEIFLYKRCRNIACQNLLPADDCD----CDICSNKKGFCNLCM------------CV 158 ++ +I+L+ N C + L CD C I N+ C C+ Sbjct: 1017 PNVPDIYLF----NWKCDDCLKCSKCDYSNLCFINYNEWELHLDCCINCYKEYEKKNFCI 1072 Query: 159 ICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGL 192 IC++ ++ +W+ CDVC W H C E Sbjct: 1073 ICNEKYKVDDSNKWVECDVCKFWIHLSCDKDEDR 1106 >AAA_CLPB1_202-396_PF00004.17 Length = 195 Score = 49.4 bits (117), Expect = 2e-04 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++ + ++ E+ V+ + A R Sbjct: 132 RFQQVLVDQPTVPDTIS--ILRGLKERYEVHHGVRIADSALVAAAMLSSRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -TDRFLPDKA 190 >AAA_CLPB2_204-398_PF00004.17 Length = 195 Score = 49.4 bits (117), Expect = 2e-04 Identities = 18/70 (25%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ EI V+ + AE R Sbjct: 132 RFQTVIVDQPSVEDTVS--ILRGLKEKYEIHHGVRIKDAALVAAAELSNRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -ADRFLPDKA 190 >gi|42565848|ref|NP_190778.2| PHD finger family protein [Arabidopsis thaliana] Length = 696 Score = 49.4 bits (117), Expect = 2e-04 Identities = 24/119 (20%), Positives = 36/119 (30%), Gaps = 15/119 (12%) Query: 130 ACQNLLPADDCDCD-----ICSNKKG--FCNLCMCVICSKFDFASNTCRWIGCDVCSHWC 182 +C++ +P + C + G F C +C K S + CD C W Sbjct: 265 SCESTVPGNGQSLRWFLGHTCCDACGRLFVKGNYCPVCLKVYRDSEATPMVCCDFCQRWV 324 Query: 183 HTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEAL 241 H C M G + C C S VKD+ W + + Sbjct: 325 HCQCDGISDEKYMQFQVDGNL-----QYKCSTCRGESY---QVKDLEDAVQEIWKRKDM 375 >PHD_Q8GZ42_415-469_PF00628.16 Length = 55 Score = 49.4 bits (117), Expect = 2e-04 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 8/62 (12%) Query: 157 CVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACN 216 C IC + ++ W+ CD C W H+ C S K + E ++C C Sbjct: 2 CGICKRIWNHLDSQSWVRCDGCKVWIHSACD--------QISHKHFKDLGETDYYCPTCR 53 Query: 217 HT 218 Sbjct: 54 TK 55 >AAA_CLPB2_203-397_PF00004.17 Length = 195 Score = 49.0 bits (116), Expect = 3e-04 Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQE D P++ + ++ E+ V+ + A R Sbjct: 132 RFQEVLVDEPNVLDTIS--ILRGLKERYEVHHGVKIADSALVAAAMLSNRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -SDRFLPDKA 190 >AAA_CLPB_204-398_PF00004.17 Length = 195 Score = 49.0 bits (116), Expect = 3e-04 Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + + A R Sbjct: 132 RFQQVFVDQPSVEDTIS--ILRGLKERYEVHHGVKISDSALVAAATLSTRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L KA Sbjct: 182 -SDRFLPSKA 190 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 49.0 bits (116), Expect = 3e-04 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E+ VQ T + A R Sbjct: 132 RFQKVYVAEPSVEDTIA--ILRGLKERYELHHHVQITDPAIVAAATLSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -SDRMLPDKA 190 >gi|6967978|emb|CAB75146.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 857 Score = 49.0 bits (116), Expect = 3e-04 Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 16/115 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + PS+ E ++ EI V + A+ R Sbjct: 332 RFQPVNVGEPSVN--EALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR L DKA A +LKM+ + + + ++ + + E + +++ DE Sbjct: 382 -ADRFLPDKAIDLIDEAAAELKMQIESEPSSLRKVRKDIETLEVENEALKMENDE 435 >gi|62665845|ref|XP_228081.3| PREDICTED: similar to Disco-interacting protein 2 homolog [Rattus norvegicus] Length = 4882 Score = 49.0 bits (116), Expect = 3e-04 Identities = 45/222 (20%), Positives = 86/222 (38%), Gaps = 20/222 (9%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 L + + + +L+ L +L Q+C+ + ++ +A ++ E Sbjct: 443 ANLQKEKETALTELREMLNGRRAQELALLQSRQQCELELMREQHAREKEEMALRNE-QET 501 Query: 321 AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME------RQKKK 374 AE+ + +ME + + + S + C L + A +ME +++ Sbjct: 502 AELKEKFRSEMEKTVQMMETLKQDWESERELCLETLRKELSAKHQSEMEGLQNQFQKELS 561 Query: 375 PQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLK-LRLS 433 Q ELE I + K EA++ LK EA+ +A +YL+ L L Sbjct: 562 EQKAELEKIFQAKH-EAEV-SLKNLEAQHQAAIRKLQEDLRSEH------CQYLQDLELR 613 Query: 434 EAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 E+ + E E Q ++ +K + + EIR L +E Sbjct: 614 FREKEKAKELE----LETLQASYEDLKAQSQEEIRHLWSQLE 651 >gi|42561142|ref|NP_975593.1| ATP dependant protease ClpB [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 713 Score = 49.0 bits (116), Expect = 3e-04 Identities = 18/119 (15%), Positives = 38/119 (31%), Gaps = 16/119 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P+++ ++ E V+ + + R Sbjct: 186 RFQRVLVSEPTIDQTIS--ILRGLKDRFETYHGVRIHDNALVSAVKLSSRYI-------- 235 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A ++ E +++++ V + E + + D+ +E Sbjct: 236 -TDRYLPDKAIDLVDEACASIRTELASVPIELDQVNRKVMQLEIETSALEKEKDDKSKE 293 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 49.0 bits (116), Expect = 3e-04 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E+ V+ + + A R Sbjct: 132 RFQPVFVSEPTVEDTVS--ILRGLKEKYEVHHGVRISDSAIVAAATLSNRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -ADRFLPDKA 190 >gi|50758242|ref|XP_415827.1| PREDICTED: similar to myosin 18A isoform a; myosin 18A; myosin containing PDZ domain [Gallus gallus] Length = 2613 Score = 49.0 bits (116), Expect = 3e-04 Identities = 46/264 (17%), Positives = 91/264 (34%), Gaps = 36/264 (13%) Query: 231 HCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL--KSKLIDPLDACNFI 288 H + +E++ +R+ + +L + ++ + L K +L L A + Sbjct: 2108 HAKEVESRD---EEVEEIRQSCQKKLKQMEMQLEEEYEDKQKVLREKRELESKLSAVSD- 2163 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEI--AEVVQDTARKMEVVAEEKMRMFKKAR 346 Q L A A +I + + K E +A+ K +++ Sbjct: 2164 -QANQRDFETEKRLRRD-LKRTKA-LLADAQIMLDHLKNNAPSKRE-IAQLK-NQLEESE 2218 Query: 347 SVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE--ARRE 404 KA +++E + QI++L + + Q + +E +R E Sbjct: 2219 -----FTCAAAVKARK--SMEVEIEDLHLQIDDLSKAKAALEEQLSRLQREKNEVQSRLE 2271 Query: 405 AEXXXXXXXXXXXXXXXXYTSKYLKL------RLSEAEERRQYLFEELKAQENSQCDFDP 458 + S+ L +L E + +Q L E+L+ + SQ +F Sbjct: 2272 EDQEDMNELMKKHKAAVAQASRDLAQMNDLQAQLEEVSKEKQELQEKLQGLQ-SQLEFLE 2330 Query: 459 MKM-------RMESEIRGLLKGME 475 M R E++IR L +E Sbjct: 2331 QSMVDKSLVSRQEAKIRELETRLE 2354 Score = 43.6 bits (102), Expect = 0.012 Identities = 43/219 (19%), Positives = 76/219 (34%), Gaps = 24/219 (10%) Query: 257 DARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDA 316 D K+L + ++ KL+ + + + + +L+ + Sbjct: 1905 DFTKKRLQQELED---KLEVEQQGKRQLERRLADLQADGEESQRALQ--------QLKKK 1953 Query: 317 CNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQ 376 C +A +QDT +E + KK R D EL +++R+K + Sbjct: 1954 CQRLAAELQDTKLHLEGQQGRNHDLEKKQR----RFDGELSQAHEETQRERLQREKLSRE 2009 Query: 377 IEEL-ESIVRLKQAEADMFQLKADEA----RREAEXXXXXXXXXXXXXXXXYTSKYLKLR 431 + L + LKQ + AD A R EA +K K Sbjct: 2010 KDVLVAEVFGLKQL---LEDKDADIAGLTQRAEALEAELQDISCQESKDEASLAKVKKQ- 2065 Query: 432 LSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGL 470 L + E + + EEL Q + + K+R+E E+ L Sbjct: 2066 LRDLEAKAKDQEEELDEQAGTIQMLEQAKLRLEMEMERL 2104 Score = 37.5 bits (86), Expect = 0.73 Identities = 26/145 (17%), Positives = 52/145 (35%), Gaps = 26/145 (17%) Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGG-FLIAPQDA 316 A+ L + +E + K K +L + L L F ++ D + E + + Sbjct: 2296 AQMNDLQAQLEE-VSKEKQELQEKLQGLQSQLEFLEQSMVDKSLVSRQEAKIRELETRLE 2354 Query: 317 CNE---------IAEVVQDTARKME-----VVAEEKMRMFKKARSVLDACDRELEDKACA 362 + ++ + E AE + + K R+L D Sbjct: 2355 FERTQVKRLESLATRLKENMEKLTEERDQRAAAENREKEQNK------RLQRQLRDVKEE 2408 Query: 363 VTDL---KMERQKKKPQIE-ELESI 383 + +L + E +KK ++E +LES+ Sbjct: 2409 MGELAKKEAEASRKKHELEMDLESL 2433 >gi|7576225|emb|CAB87915.1| AtClpC [Arabidopsis thaliana] Length = 952 Score = 49.0 bits (116), Expect = 3e-04 Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 23/118 (19%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E E ++ EI ++ T + A+ + Sbjct: 448 RFQPVKVPEPTVE--EAIQILQGLRERYEIHHKLRYTDEALVAAAQLSHQYI-------- 497 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A + +++ + + ELE +R + +EA R Sbjct: 498 -SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKQLRQ-------ITKEKNEAVR 547 >AAA_CLPB_204-397_PF00004.17 Length = 194 Score = 49.0 bits (116), Expect = 3e-04 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++EN ++ E+ V T + A R Sbjct: 131 RFQKIFIIEPNIENTIA--ILRGLKERYELHHNVHITDPAIVAAATLSNRYI-------- 180 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 181 -SDRQLPDKA 189 >gi|72139351|ref|XP_782203.1| PREDICTED: similar to myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila), partial [Strongylocentrotus purpuratus] Length = 2235 Score = 49.0 bits (116), Expect = 3e-04 Identities = 16/105 (15%), Positives = 30/105 (28%), Gaps = 23/105 (21%) Query: 131 CQNLLPADDCDCDICSNKK------GF--CNLC--------MCVICSK-FDFASNTCRWI 173 C + C + GF C C C +C K ++ + + Sbjct: 1325 CSRCVRCKSCGATTPGSDPKAQWMHGFSHCQECGKLFEKGNYCPVCKKCYEDDDFESKMV 1384 Query: 174 GCDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIACNH 217 C C+ W H C + + ++ + + C C Sbjct: 1385 QCADCNRWVHAKCENLSDDQYRILTEL-----PDSVPYRCPPCAK 1424 >gi|6754392|ref|NP_034717.1| intersectin 1 (SH3 domain protein 1A) [Mus musculus] Length = 1714 Score = 49.0 bits (116), Expect = 3e-04 Identities = 50/240 (20%), Positives = 84/240 (35%), Gaps = 48/240 (20%) Query: 235 NWDFEALIKELDFVRKIFRGS--EDARGKKLFWKADELIEK---LKSKLIDPLDACNFIL 289 W+ + L+ K G+ AR K L ++ + L +K L+ KL D C Sbjct: 447 EWERNRRQELLNQRNKEQEGTVVLKARRKTLEFELEALNDKKHQLEGKLQD--IRCRLAT 504 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACN------EIAEVVQDTARKMEVVAEEKMRMFK 343 QE +S + S E Q + Q + +++ V + + Sbjct: 505 QR-QEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILSDQLKQVQQNSL---- 559 Query: 344 KARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 R L R LE K ++ RQ+ + Q++E+E R K E D+F + E R Sbjct: 560 -HRDSLLTLKRALEAK-------ELARQQLREQLDEVERETRSKLQEIDVFNNQLKELRE 611 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-----EERRQYLFEELKAQENSQCDFDP 458 + K R EA +E+ + E K +E++Q Sbjct: 612 -----------------IHSKQQLQKQRSLEAARLKQKEQERKSLELEKQKEDAQRRVQE 654 >PHD_Q5CVU6_611-667_PF00628.16 Length = 57 Score = 49.0 bits (116), Expect = 3e-04 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 8/63 (12%) Query: 156 MCVICSKFDFASNTCRWIGCDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIA 214 C IC K +S W+ CD+C W H DC I+ + K L++C A Sbjct: 1 FCSICRKIWTSSWEGEWLQCDICKFWVHYDCDKDLNEPIEFYSNVKN-------LYNCPA 53 Query: 215 CNH 217 C Sbjct: 54 CRS 56 >gi|51744715|ref|XP_488011.1| PREDICTED: RIKEN cDNA 4932431P20 [Mus musculus] Length = 2382 Score = 49.0 bits (116), Expect = 3e-04 Identities = 34/200 (17%), Positives = 79/200 (39%), Gaps = 19/200 (9%) Query: 256 EDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQD 315 E + K K +E+ L K ++ + ++ ++ + E +G L +D Sbjct: 1428 EKEKIAKKINKVEEVKAVLAQKTETMMEKEKNLASEEKKVREEAKNQE-LDGQELALKED 1486 Query: 316 ACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA--CDRELEDKACAVTDLKMERQKK 373 E AE ++D + EE+M + L+ +E + + L +E+ ++ Sbjct: 1487 ELYEEAEKLEDKREAL--AKEEEMLALYEKNLSLEEEMLAQEAKHQMEEEKRLALEKDRR 1544 Query: 374 KPQIEEL-ESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL 432 +++ L E +L++ + + Q K A+R+ E ++ ++ Sbjct: 1545 PEEVKHLQERREKLREQKQRLAQEKERIAQRKTELKVKK-------------TRLAQMEE 1591 Query: 433 SEAEERRQYLFEELKAQENS 452 S ++ER + E+ + E Sbjct: 1592 SLSQERHKLSLEKERLTERG 1611 >gi|14133241|dbj|BAA86438.2| KIAA1124 protein [Homo sapiens] Length = 1760 Score = 49.0 bits (116), Expect = 3e-04 Identities = 51/283 (18%), Positives = 95/283 (33%), Gaps = 79/283 (27%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKE-LDFVRKI---------FRGSEDA-----RGK 261 ++ ++ Q A L +E L+ RK+ GS A R K Sbjct: 475 KDEDVQRDLEHSLQMEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSSRALSNSNRDK 534 Query: 262 KLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIA 321 ++ K +E IE+LK+K+ DS LE +A + + Sbjct: 535 EI-KKLNEEIERLKNKIA------------------DSNRLERQ-LEDTVALRQEREDST 574 Query: 322 EVVQDTARKMEVVAEEK---MRMFKKARSVLDACDRELEDKAC-------AVTDLKMERQ 371 + ++ ++ VV +EK + +A L + +EL+D ++L Sbjct: 575 QRLRGLEKQHRVVRQEKEELHKQLVEASERLKSQAKELKDAHQQRKLALQEFSELNERMA 634 Query: 372 KKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR 431 + + Q +++ +R K+ E ++ K D R+E + KLR Sbjct: 635 ELRAQKQKVSRQLRDKEEEMEVATQKVDAMRQEM-------------------RRAEKLR 675 Query: 432 LSE--------AEERRQYLFEELKAQENSQCDFDPMKMRMESE 466 AE ++ E + +M E E Sbjct: 676 KELEAQLDDAVAEASKERKLRE-------HSENFCKQMESELE 711 Score = 38.2 bits (88), Expect = 0.50 Identities = 61/333 (18%), Positives = 99/333 (29%), Gaps = 77/333 (23%) Query: 216 NHTSELFGFVKDVFQHCAPNWDFEALIKELD--FVRKIFRGSE----DARGKKLFWKADE 269 + E+ + V E L KEL+ + S+ + + + Sbjct: 649 DKEEEMEVATQKVDAMRQEMRRAEKLRKELEAQLDDAVAEASKERKLREHSENFCKQMES 708 Query: 270 LIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFL-IAPQDACNEIAEVVQDTA 328 +E LK K L QE S E L + E + V++ Sbjct: 709 ELEALKVKQGGRGAGA--TLEHQQE---ISKIKSELEKKVLFYEEELVRREASHVLEVKN 763 Query: 329 RKMEVVAEEKMR--MFKKARS---VLDACDRELEDKACAV-----TDLKMERQ------- 371 K EV E + + K+ L+ RE ++ + ER Sbjct: 764 VKKEVHDSESHQLALQKEILMLKDKLEKSKRERHNEMEEAVGTIKDKYERERAMLFDENK 823 Query: 372 KKKPQIEELESIV-------RLKQAE-ADMFQLKADEARREAEXXXXXXXXXXXXXXXXY 423 K + E+L S V R + E D+ K A EA+ Y Sbjct: 824 KLTAENEKLCSFVDKLTAQNRQLEDELQDLAAKKESVAHWEAQIAEIIQWVSDEKDARGY 883 Query: 424 --------TSKYLKLRLS-------------------------------EAEER-RQYLF 443 T + LR S EAE R +Q + Sbjct: 884 LQALASKMTEELEALRSSSLGSRTLDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVQ 943 Query: 444 EELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 EEL+ +++ + E++ R LL+ ME+ Sbjct: 944 EELRKVKDANLTLESKLKDSEAKNRELLEEMEI 976 >gi|66855575|ref|ZP_00399649.1| AAA ATPase, central region:Clp, N terminal [Anaeromyxobacter dehalogenans 2CP-C] Length = 760 Score = 48.6 bits (115), Expect = 4e-04 Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 19/102 (18%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS+E+ ++ E V+ T R + AE + Sbjct: 341 RFQKIEVHEPSVEDTV--KILRGLKKVYEEHHGVEYTPRALRAAAELSAKHIN------- 391 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQI--------EELESIV 384 DR+L DKA V D R + +P+ ++E +V Sbjct: 392 --DRQLPDKAIDVLDEAGARDRMRPEARRHRRITGRDVERVV 431 >AAA_Q6AC89_75-269_PF00004.17 Length = 195 Score = 48.6 bits (115), Expect = 4e-04 Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E V + A R Sbjct: 132 RFQQVYVGEPSVEDTVA--ILRGLKGRYEAHHGVTIEDSALVAAASLSNRYI-------- 181 Query: 351 ACDRELEDKA 360 R+L DKA Sbjct: 182 -TARQLPDKA 190 >gi|4838526|gb|AAD31026.1| EH-domain/SH3-domain containing protein [Rattus norvegicus] Length = 1146 Score = 48.6 bits (115), Expect = 4e-04 Identities = 47/216 (21%), Positives = 74/216 (34%), Gaps = 46/216 (21%) Query: 257 DARGKKLFWKADELIEK---LKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAP 313 AR K L ++ + L +K L+ KL D C QE +S + S E Sbjct: 471 KARRKTLEFELEALNDKKHQLEGKLQD--IRCRLATQR-QEIESTNKSRELRIAEITHLQ 527 Query: 314 QDACN------EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 Q + Q + +++ V + + R L R LE K + Sbjct: 528 QQLQESQQMLGRLIPEKQILSDQLKQVQQNSL-----HRDSLLTLKRALEAK-------E 575 Query: 368 MERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY 427 + RQ+ + Q++E+E R K E D+F + E R + Sbjct: 576 LARQQLREQLDEVEKETRSKLQEIDVFNNQLKELRE-----------------IHSKQQL 618 Query: 428 LKLRLSEAE-----ERRQYLFEELKAQENSQCDFDP 458 K R EAE E+ + E K +E Q Sbjct: 619 QKQRSIEAERLKQKEQERKSLELEKQKEEGQRRVQE 654 >gi|62087516|dbj|BAD92205.1| CDC42 binding protein kinase alpha variant [Homo sapiens] Length = 1702 Score = 48.3 bits (114), Expect = 4e-04 Identities = 44/251 (17%), Positives = 80/251 (31%), Gaps = 35/251 (13%) Query: 229 FQHCAPNWDFEALIKE-LDFVRKIFRGSEDARGKKLFWKADELIEKLK-SKLIDPLDACN 286 A + L +E L+ RK+ ++ ++ L+ S + PL A Sbjct: 450 LATEAYERRIKRLEQEKLELSRKLQESTQ-------------TVQALQYSTVDGPLTASK 496 Query: 287 FILMFFQECDSDSP-SLENGEGGFLIAPQDACNEIAEVVQDTARKMEV----------VA 335 L + + E L + N + + + D R+++ Sbjct: 497 D-LEIKNLKEEIEKLRKQVTESSHLEQQLEEANAVRQELDDAFRQIKAYEKQIKTLQQER 555 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLK---MERQKKK----PQIEELESIVRLKQ 388 E+ + +A L +EL+D C ME ++ Q ++L VR K+ Sbjct: 556 EDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRDKE 615 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE-ELK 447 E D+ K + R+E +L E E E EL+ Sbjct: 616 EEVDLVMQKVESLRQELRRTERAKKELEVHTEALAAEASKDRKLREQSEHYSKQLENELE 675 Query: 448 AQENSQCDFDP 458 + Q + P Sbjct: 676 GLKQKQISYSP 686 >AAA_Q5FQY4_202-396_PF00004.17 Length = 195 Score = 48.3 bits (114), Expect = 4e-04 Identities = 28/159 (17%), Positives = 41/159 (25%), Gaps = 46/159 (28%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLF-WKADELIEKLKSKLIDPLDACNFIL-- 289 A + L V K +E LF + L+ +S +DA N I Sbjct: 47 AGAKYRGEFEERLKAVLKEIETAEG--EIILFIDEMHTLVGAGRSD--GAMDASNLIKPE 102 Query: 290 ----------------------------MFFQECDSDSPSLENGEGGFLIAPQDACNEIA 321 FQ PS+ + ++ E+ Sbjct: 103 LARGTLHCVGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTIS--ILRGIKEKYELH 160 Query: 322 EVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA 360 V+ T + A R DR L DKA Sbjct: 161 HGVRITDNAIVAAATLSNRYI---------TDRFLPDKA 190 >gi|399212|sp|P31541|CLAA_LYCES ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplast precursor Length = 926 Score = 48.3 bits (114), Expect = 5e-04 Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 21/122 (17%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PS++ ++ EI + T +E A+ + Sbjct: 427 RFQPVKVPEPSVDETI--QILKGLRERYEIHHKLHYTDEAIEAAAKLSHQYI-------- 476 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRL--KQA-EADMFQ--LKADE 400 DR L DKA A + +++ + + ELE +R K+ EA Q KA E Sbjct: 477 -SDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNEAVRGQDFEKAGE 535 Query: 401 AR 402 R Sbjct: 536 LR 537 >gi|73955094|ref|XP_546507.2| PREDICTED: similar to golgi autoantigen, golgin subfamily a, 4 [Canis familiaris] Length = 1970 Score = 48.3 bits (114), Expect = 5e-04 Identities = 38/212 (17%), Positives = 71/212 (33%), Gaps = 29/212 (13%) Query: 244 ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFIL------MFFQECDS 297 L +R + S +A +L + + ++KL+ +L A L M Q + Sbjct: 1192 RLSQLRAQVQSSAEADEGRLRAEQEASLQKLREELESLQKAERASLEQRSRQMLEQLKEE 1251 Query: 298 DSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE 357 S + + + A ++ E +Q ++ E + R LD LE Sbjct: 1252 MEASEKREQAALNAEKEAALRQLREQLQGERKEAVAALEREHRA------ELDRLSSSLE 1305 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXX 417 K V ++ ++ Q EE + L AE Q + E E Sbjct: 1306 AKHREVVSSLQKKIEEAQQKEETQLQESLSWAEQRAQQKVHQVLQYEQEL---------- 1355 Query: 418 XXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ 449 S L+ + E E + +++K + Sbjct: 1356 -------SGLLREKRQEVEREHERKLDKMKEE 1380 Score = 42.9 bits (100), Expect = 0.019 Identities = 41/220 (18%), Positives = 77/220 (35%), Gaps = 25/220 (11%) Query: 260 GKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAP------ 313 ++L E ++++ + LD + + E E + P Sbjct: 1352 EQELSGLLREKRQEVEREHERKLDKMKEEHQ-----QVVAEAREQYEAEVKVYPRRCGWL 1406 Query: 314 -QDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQK 372 + E++ R++E + + R +V DR+LED + Q+ Sbjct: 1407 PLQERKQRTELLGHLTRELERLRKSHEREL---EAVRQTQDRQLEDLRR-----RHREQE 1458 Query: 373 KKPQIEELESIVRLKQAEADMFQLKADE--ARREAEXXXXXXXXXXXXXXXXYTSKYLKL 430 +K Q E+E R K +A + QL E ARRE + + Sbjct: 1459 RKLQDLEVELETRTKDVKAKLAQLDLQEETARREQQQLLDVQRQVVLKSQEATANH---Q 1515 Query: 431 RLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGL 470 L EA++ +L E + + K+ +ES++ L Sbjct: 1516 HLDEAKKEHTHLLESNQQLRKLLDELRAHKLELESQVDAL 1555 >gi|67517511|ref|XP_658590.1| hypothetical protein AN0986.2 [Aspergillus nidulans FGSC A4] Length = 748 Score = 48.3 bits (114), Expect = 5e-04 Identities = 18/83 (21%), Positives = 24/83 (28%), Gaps = 17/83 (20%) Query: 136 PADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKM 195 P C + C IC+ D I C+ CSHW HT C Sbjct: 653 PDLATPCTDRYSNPSNGTRC---ICNSMDN--GGHLMIQCESCSHWLHTKC--------- 698 Query: 196 GHSAKGASGMTEMLFHCIACNHT 218 ++ C+ C T Sbjct: 699 ---VGLERSNLPSVYVCVFCAQT 718 >gi|66850531|gb|EAL90858.1| ATP-dependent Clp protease, putative [Aspergillus fumigatus Af293] Length = 997 Score = 48.3 bits (114), Expect = 5e-04 Identities = 31/184 (16%), Positives = 60/184 (32%), Gaps = 43/184 (23%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++ ++ E+ V + AE R Sbjct: 424 RFQQVLVKEPTVSETIS--ILRGLKEKYEVHHGVNILDGAIVAAAELAARYL-------- 473 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L D A A +++ R+ + ++ LE +R Q E + + D+A Sbjct: 474 -TARRLPDSAVDLIDEAAAAVRVTRESEPEALDNLERRLRQLQIEIHALEREKDDAS--- 529 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK-AQENSQCDFDPMKMRME 464 K RL A++ + EEL+ +E + + K + Sbjct: 530 -----------------------KARLEAAKQEAANVTEELRPLREKYESEKQRSKAIQD 566 Query: 465 SEIR 468 ++I+ Sbjct: 567 AKIK 570 >gi|68512803|gb|EAN36605.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Rubrobacter xylanophilus DSM 9941] Length = 834 Score = 47.9 bits (113), Expect = 5e-04 Identities = 32/199 (16%), Positives = 64/199 (32%), Gaps = 31/199 (15%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + D +I +D + + + + + ++I Sbjct: 263 EFEERLKKIMKEIIDHGDIILFIDEIHNLVGAGAAEGAIDAASILKPALARGEIQVIGAT 322 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P++E E ++ E ++ T + Sbjct: 323 TIDEYRKYVEKDKALERRFQTIQVGEPTVEETEL--ILKGLRERYEEHHKIEITDEALRA 380 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLK---MERQKKKPQI-EELESIV 384 + R DR L DKA A + +K M + +I +EL + Sbjct: 381 ASRLGDRYI---------SDRFLPDKAIDLVDEAASKMKIKTMSQPPYYKEIDDELAEVR 431 Query: 385 RLKQAEADMFQLKADEARR 403 R K+A D + +EA R Sbjct: 432 RRKEAAID--SQEYEEAAR 448 >AAA_CLPB_193-386_PF00004.17 Length = 194 Score = 47.9 bits (113), Expect = 5e-04 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+E+ ++ ++ V+ T + A R Sbjct: 131 RFQPVFVDEPSVEDTIS--ILRGIKERYQVHHNVEITDPALVAAATLSNRYI-------- 180 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 181 -TDRQLPDKA 189 >gi|15827032|ref|NP_301295.1| putative ATP-dependent Clp protease [Mycobacterium leprae TN] Length = 848 Score = 47.9 bits (113), Expect = 7e-04 Identities = 26/117 (22%), Positives = 39/117 (33%), Gaps = 20/117 (17%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E V T M A R Sbjct: 341 RFQPVQVGEPTVEHTI--EILKGLRDRYEAHHRVSITDSAMVAAATLADRYIN------- 391 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 DR L DKA A +++ R P + E + K AEA + A +A+ Sbjct: 392 --DRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDE----KIAEARREKESAIDAQ 442 >gi|33641129|emb|CAE22259.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB [Prochlorococcus marinus str. MIT 9313] Length = 928 Score = 47.9 bits (113), Expect = 7e-04 Identities = 32/129 (24%), Positives = 44/129 (34%), Gaps = 27/129 (20%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PSLE ++ E+ V T + R Sbjct: 389 RFQQVLIKEPSLELSV--EILRGLKERYELHHGVTITDGAVTAANRLADRYI-------- 438 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQA---------EADMFQL 396 DR L DKA A LKM+ K +EE E+ +R + E + QL Sbjct: 439 -SDRCLPDKAIDLIDEAAAQLKMDVTSKPQVVEEAEAELRRVELALLAAEQAPEVERVQL 497 Query: 397 KADEARREA 405 +A AR A Sbjct: 498 QA--ARIAA 504 >gi|3309543|gb|AAC41377.1| MLL [Takifugu rubripes] Length = 4498 Score = 47.9 bits (113), Expect = 7e-04 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 22/121 (18%) Query: 125 RCRNIACQNLLPADDCD---------CDICSNKKGFCNLCMCVICSK-FDFASNTCRWIG 174 RC+ C P D C C+ F +CV+C+K ++ + + Sbjct: 1769 RCK--CCGATKPGKSWDAQWSHDFSMCHDCAKL--FAKRNICVLCNKCYEDDEADGKMVE 1824 Query: 175 CDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIAC--NHTSELFGFVKDVFQH 231 C C H H C + + + ++ + + C C H +E ++ Q Sbjct: 1825 CGRCHHRVHAKCEKLTDDMYELLSKL-----PESVAYTCTKCTERHPAEWRTALERQLQG 1879 Query: 232 C 232 C Sbjct: 1880 C 1880 >gi|47221226|emb|CAG13162.1| unnamed protein product [Tetraodon nigroviridis] Length = 3783 Score = 47.5 bits (112), Expect = 7e-04 Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 30/126 (23%) Query: 125 RCRNIACQNLLPADDCD---------CDICSNKKGFCNLCMCVICSK-FDFASNTCRWIG 174 RC+ C P D C C+ F C IC+K ++ + I Sbjct: 1549 RCK--CCGATKPGKSWDAQWSHDFSMCHDCAKL--FAKRNFCHICTKCYEDDEADAKMIE 1604 Query: 175 CDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIACNHT----------SELFG 223 C C H H C + + + ++ + + C C ++L G Sbjct: 1605 CGRCHHRVHAKCEKLTDDMYELLSKL-----PESVAYTCTKCAERYPTEWRMALETQLQG 1659 Query: 224 FVKDVF 229 V V Sbjct: 1660 CVHHVL 1665 >gi|40849896|gb|AAR95660.1| plectin 6 [Rattus norvegicus] Length = 4688 Score = 47.5 bits (112), Expect = 7e-04 Identities = 46/240 (19%), Positives = 91/240 (37%), Gaps = 24/240 (10%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFF 292 E +EL+ R++ G+ R L + + + + +++ + Sbjct: 1823 QAVRQRELAEQELEKQRQLAEGTAQQR---LAAEQELIRLRAETEQGE---------QQR 1870 Query: 293 QECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDAC 352 Q + + L++ Q+ E+A+V +MEV+ K R +++RS + Sbjct: 1871 QLLEEELARLQHEATAATQKRQELEAELAKV----RAEMEVLLASKARAEEESRSTSEKS 1926 Query: 353 DRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXX 412 + LE +A +L E + + EE + + + AE D + +A+ R E Sbjct: 1927 KQRLEAEAGRFRELAEEAARLRALAEEAKR--QRQLAEEDAARQRAEAERVLTEKLAAIS 1984 Query: 413 XXXXXXXXXXYTSKY-----LKL-RLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESE 466 K +L RL+E E ++ EE AQ + + ++R SE Sbjct: 1985 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKASE 2044 Score = 40.6 bits (94), Expect = 0.092 Identities = 38/191 (19%), Positives = 71/191 (37%), Gaps = 15/191 (7%) Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 FI + + + E ++ E+ ++ + E A+ K + +A Sbjct: 1476 KFISETLRRMEEEERLAEQQRA----EERERLAEVEAALEKQRQLAEAHAQAKAQAELEA 1531 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE--ADMFQLKADE--- 400 R + E+ + A D + +QK+ Q EEL+ + + +AE A Q++A E Sbjct: 1532 RELQRRMQEEVTRREEAAVDAQ--QQKRSIQ-EELQHLRQSSEAEIQAKAQQVEAAERSR 1588 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTS---KYLKLRLSEAEERRQYLFEELKAQENSQCDFD 457 R E E + L+ R EAE +++ EE + D Sbjct: 1589 MRIEEEIRVVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDES 1648 Query: 458 PMKMRMESEIR 468 K + E+E+ Sbjct: 1649 QRKRQAEAELA 1659 >AAA_Q68XR2_202-396_PF00004.17 Length = 195 Score = 47.5 bits (112), Expect = 7e-04 Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ PS+E+ ++ E+ V+ + + A R Sbjct: 132 RFQPVYVGEPSVEDTIS--ILRGIKEKYELHHAVRISDSAIVAAATLSNRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -TDRYLPDKA 190 >AAA_CLPB_205-399_PF00004.17 Length = 195 Score = 47.5 bits (112), Expect = 7e-04 Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 11/78 (14%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ D P++E+ +I EI ++ + A+ R Sbjct: 124 EKDKALERRFQPVIIDEPTVEDTIS--IIRGLKERFEIHHGIRIHDSAIVAAAKLSQRYI 181 Query: 343 KKARSVLDACDRELEDKA 360 DR L DKA Sbjct: 182 ---------TDRYLPDKA 190 >AAA_CLPB2_206-400_PF00004.17 Length = 195 Score = 47.5 bits (112), Expect = 7e-04 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+E+ ++ E+ V+ + A R Sbjct: 132 RFQQVLVDEPSVEDTIS--ILRGLRERLEVFHGVKIQDTALVSAATLSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -TDRFLPDKA 190 >AAA_Q873Z4_139-332_PF00004.17 Length = 194 Score = 47.5 bits (112), Expect = 8e-04 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++++ ++ E+ V+ T + A R Sbjct: 131 RFQPIQVGEPTVQDTIS--ILRGIKERYEVHHGVRITDNALVAAASYSNRYI-------- 180 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 181 -TDRFLPDKA 189 >gi|47219426|emb|CAG10790.1| unnamed protein product [Tetraodon nigroviridis] Length = 1776 Score = 47.5 bits (112), Expect = 8e-04 Identities = 19/80 (23%), Positives = 24/80 (30%), Gaps = 17/80 (21%) Query: 124 KRCR-NIACQNLLPADDC------DCDICSNKK-GFCNLC--------MCVICSK-FDFA 166 C+ C + C D+ N C C C IC K +D Sbjct: 257 MNCKIPWVCMTCIRCKSCGVTPGKTWDLAWNHDEDLCPDCTLLHKKGNFCTICHKCYDDN 316 Query: 167 SNTCRWIGCDVCSHWCHTDC 186 I C C+HW H C Sbjct: 317 MRHAEMIQCSACNHWIHYSC 336 >AAA_Q5QTU7_201-395_PF00004.17 Length = 195 Score = 47.5 bits (112), Expect = 8e-04 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + P++E+ ++ E+ V+ T + A R Sbjct: 132 RFQKVLVEEPNVEDTIA--ILRGLKERYELHHSVEITDPAIVAAASLSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 182 -SDRKLPDKA 190 >gi|67465519|ref|XP_648944.1| AAA family ATPase, putative [Entamoeba histolytica HM-1:IMSS] Length = 866 Score = 47.5 bits (112), Expect = 8e-04 Identities = 34/180 (18%), Positives = 57/180 (31%), Gaps = 21/180 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ +++ E + T + A R Sbjct: 331 RFQQVYVSEPSVEDTL--YILRGIREKYENHYGLTITDSALVSAATLSKRYIN------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A L ++ + +I+ LE E + + E E Sbjct: 382 --GRFLPDKAIDLVDEACATLFTQKNSQPEEIDRLERRETQINVEKIALEREVKETDEEH 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + K KLR++ E+ + EE+K + MK + ES Sbjct: 440 KKVIEERLKEIEKEMSENKEKLTKLRINY--EKEKGGSEEMKELATKI---ESMKHKAES 494 >gi|16758474|ref|NP_446109.1| CDC42-binding protein kinase alpha [Rattus norvegicus] Length = 1732 Score = 47.5 bits (112), Expect = 8e-04 Identities = 45/251 (17%), Positives = 79/251 (31%), Gaps = 35/251 (13%) Query: 229 FQHCAPNWDFEALIKE-LDFVRKIFRGSEDARGKKLFWKADELIEKLK-SKLIDPLDACN 286 A + L +E L+ RK+ ++ ++ L+ S + PL A Sbjct: 439 LATEAYERRIKRLEQEKLELTRKLQESTQ-------------TVQALQYSTVDGPLTASK 485 Query: 287 FILMFFQECDSDSP-SLENGEGGFLIAPQDACNEIAEVVQDTARKMEV----------VA 335 L + + E L + N + + D R+++ Sbjct: 486 D-LEIKSLKEEIEKLRKQVAEVNHLEQQLEEANSVRRELDDAFRQIKAFEKQIKTLQQER 544 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLK---MERQKKK----PQIEELESIVRLKQ 388 EE + +A L +EL+D C ME ++ Q ++L VR K+ Sbjct: 545 EELNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRDKE 604 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE-ELK 447 E D+ KA+ R+E +L E E EL+ Sbjct: 605 EEVDLVMQKAESLRQELRRAERAKKELEVHTEALIAEASKDRKLREQSRHYSKQLENELE 664 Query: 448 AQENSQCDFDP 458 + Q + P Sbjct: 665 GLKQKQISYSP 675 >AAA_Q5L1U6_202-396_PF00004.17 Length = 195 Score = 47.5 bits (112), Expect = 8e-04 Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++E+ ++ E+ V+ R + A R Sbjct: 132 RFQQVLVQEPTVEDTIS--ILRGLKERYEVHHGVKIHDRALVAAAVLSDRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -SDRFLPDKA 190 >gi|44985843|gb|AAS54454.1| AGL036Cp [Ashbya gossypii ATCC 10895] Length = 904 Score = 47.5 bits (112), Expect = 9e-04 Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 9/160 (5%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++ ++ EI V+ + A+ R R L Sbjct: 334 RFQKIDVAEPTVRQTIA--ILRGLQGKYEIHHGVRILDSALVSAAQLAKRYLPYRR--LP 389 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF--QLKADEARREAEXX 408 +L D ACA + + R K +++ E ++L Q E + +D +E Sbjct: 390 DSAIDLVDIACAG--VAVARDSKPEELDSKERELQLIQVEINALDRDKDSDPTTKERLMQ 447 Query: 409 XXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY-LFEELK 447 +Y + R S E + EEL+ Sbjct: 448 AKQKEASLMEELEPLRQRYEEERRSHEELTKAKAKLEELE 487 >gi|57505126|ref|ZP_00371071.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter coli RM2228] Length = 857 Score = 47.1 bits (111), Expect = 0.001 Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 16/115 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + PS+ E ++ EI V + A+ R Sbjct: 332 RFQPVNVGEPSVN--EALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR L DKA A +LKM+ + + + + + + E + +++ DE Sbjct: 382 -ADRFLPDKAIDLIDEAAAELKMQIESEPSSLRKARKDIETLEVENEALKMENDE 435 >gi|39977113|ref|XP_369944.1| hypothetical protein MG06459.4 [Magnaporthe grisea 70-15] Length = 926 Score = 47.1 bits (111), Expect = 0.001 Identities = 32/173 (18%), Positives = 54/173 (31%), Gaps = 25/173 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P++ ++ E+ V + A R R Sbjct: 351 RFQQVLVKEPTINETIS--ILRGLKEKYEVHHGVTIADSALVASANLAARYLTTRRMPDS 408 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXX 410 A D L D+A A + E Q + I+ LE +R + E + DEA + Sbjct: 409 AVD--LIDEAAAAVRVARESQPEI--IDSLERKLRQLKIEIHALSREKDEASK------- 457 Query: 411 XXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRM 463 K EE + L E+ +++ D KM++ Sbjct: 458 ------------GRLALAKQEAQNVEEELRPLREKYESERKRGKDIQEAKMKL 498 >gi|49655166|emb|CAG87721.1| unnamed protein product [Debaryomyces hansenii CBS767] Length = 900 Score = 47.1 bits (111), Expect = 0.001 Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 18/121 (14%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D + ++ ++ EI V+ + A+ R Sbjct: 333 RFQKIDVPASTVPETVA--ILRGLQPRYEIHHGVRILDSALVTAAQLASRYL-------- 382 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ--LKADEARR 403 R L D A + + R K +++ LE + L + E + + ++AD + Sbjct: 383 -TYRSLPDSAVDLIDETAATVAVARDSKPEELDTLERQLHLIEVEINALERDVEADADSK 441 Query: 404 E 404 + Sbjct: 442 D 442 >AAA_CLPB_206-400_PF00004.17 Length = 195 Score = 47.1 bits (111), Expect = 0.001 Identities = 25/158 (15%), Positives = 41/158 (25%), Gaps = 44/158 (27%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFIL--- 289 A + L V K SE R + ++ K +DA N + Sbjct: 47 AGAKYRGEFEERLKAVLKEVEKSEG-RIIMFIDELHTIVGA--GKTDGAMDASNLLKPML 103 Query: 290 ---------------------------MFFQECDSDSPSLENGEGGFLIAPQDACNEIAE 322 FQ D P++E+ ++ E+ Sbjct: 104 ARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPTIEDAIS--ILRGLKERFEVHH 161 Query: 323 VVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA 360 V+ + + R DR+L DKA Sbjct: 162 GVRISDSAIVEAVTLSHRYI---------TDRQLPDKA 190 >gi|67463114|ref|XP_648214.1| HSP101-related protein [Entamoeba histolytica HM-1:IMSS] Length = 842 Score = 47.1 bits (111), Expect = 0.001 Identities = 34/180 (18%), Positives = 57/180 (31%), Gaps = 21/180 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ +++ E + T + A R Sbjct: 331 RFQQVYVSEPSVEDTL--YILRGIREKYENHYGLTITDSALVSAATLSKRYIN------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L DKA A L ++ + +I+ LE E + + E E Sbjct: 382 --GRFLPDKAIDLVDEACATLFTQKNSQPEEIDRLERRETQINVEKIALEREVKETDEEH 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + K KLR++ E+ + EE+K + MK + ES Sbjct: 440 KKVIEERLKEIEKEMSENKEKLTKLRINY--EKEKGGSEEMKELATKI---ESMKHKAES 494 >gi|50732237|ref|XP_418542.1| PREDICTED: similar to Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (Homologous to ALR protein) [Gallus gallus] Length = 6001 Score = 47.1 bits (111), Expect = 0.001 Identities = 18/98 (18%), Positives = 27/98 (27%), Gaps = 25/98 (25%) Query: 131 CQNLLPADDCDCDICSNKKGFCNLC----------MCVICSKF---DFASNTCRWIGCDV 177 C+N +C C +C C C K DF + + C + Sbjct: 1456 CKNCRVCAECGTRTSCQWHHNCLVCDSCYQQQDNLSCPFCDKLCLQDFQKD---MLHCHM 1512 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIAC 215 C W H +C G + + C C Sbjct: 1513 CKRWIHMECDRS-----PGIELESQLKD----YICTLC 1541 >gi|55625836|ref|XP_518227.1| PREDICTED: desmoplakin [Pan troglodytes] Length = 3215 Score = 47.1 bits (111), Expect = 0.001 Identities = 38/222 (17%), Positives = 93/222 (41%), Gaps = 18/222 (8%) Query: 241 LIKELDFVRKIFRGSEDA-RGKKLFWKADELIEKLK------SKLIDPLDACNFILMFFQ 293 + +EL+ +++ SED+ + KKL + + + LK + L L+ + + + Sbjct: 1917 VEEELNRLKR--TASEDSCKRKKLEEELEGMRRSLKEQAIKITNLTQQLEQASIVKKRSE 1974 Query: 294 ECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACD 353 + + +G Q+ ++ V+ R++ E K+A + Sbjct: 1975 DDLRQQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLLQEQES----VKQAHLRNEHFQ 2030 Query: 354 RELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR---EAEXXXX 410 + +EDK+ ++ + K+E ++ + E L + + E +L+ D+ RR EA+ Sbjct: 2031 KAIEDKSRSLNESKIEIERLQSLTENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSDKN 2090 Query: 411 XXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQE 450 ++ L+L+ + + + R+ L +E++ + Sbjct: 2091 ATILELRSQLQISNNRTLELQGLIHDLQRERENLRQEIEKFQ 2132 >gi|34499124|ref|NP_903339.1| ATP-dependent Clp protease, ATP-binding subunit [Chromobacterium violaceum ATCC 12472] Length = 760 Score = 47.1 bits (111), Expect = 0.001 Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 19/110 (17%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + N + FQ+ D P++E ++ + E V+ T + AE R Sbjct: 337 EKDNALSRRFQKIDVTEPTVEQTV--EILKGLKSRFEAHHGVKYTQSALSTAAELSARYI 394 Query: 343 KKARSVLDACDRELEDKACAVTD--------LKMERQKKKPQIEELESIV 384 DR L DKA V D L RQKK E+E IV Sbjct: 395 N---------DRHLPDKAIDVIDEAGAAQKILPKSRQKKVINKSEIEEIV 435 >gi|67155734|ref|ZP_00417361.1| AAA ATPase, central region:Clp, N terminal:Protein of unknown function DUF104 [Azotobacter vinelandii AvOP] Length = 756 Score = 47.1 bits (111), Expect = 0.001 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 5/103 (4%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ+ D PS+E+ G ++ E ++ + + AE R Sbjct: 336 EKDRALARRFQKVDVIEPSVEDTVG--ILRGLKPRFEQHHGIEYSDEALRAAAELSFRYI 393 Query: 343 KKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIV 384 A D + D+A A L+ E R+ K + ++E IV Sbjct: 394 NDRHMPDKAID--VIDEAGAFQRLQPEDRRAKLIDVAQVEDIV 434 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 47.1 bits (111), Expect = 0.001 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS E+ ++ E+ V+ T + A R Sbjct: 132 RFQKVLVEEPSTEDAIA--ILRGLKERYEVHHGVEITDPAIIAAATLSQRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -TDRNLPDKA 190 >gi|1296662|emb|CAA91196.1| plectin [Homo sapiens] Length = 4684 Score = 46.7 bits (110), Expect = 0.001 Identities = 45/240 (18%), Positives = 91/240 (37%), Gaps = 24/240 (10%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFF 292 E +EL+ R++ G+ R L + + + + +++ + Sbjct: 1819 QAVRQRELAEQELEKQRQLAEGTAQQR---LAAEQELIRLRAETEQGE---------QQR 1866 Query: 293 QECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDAC 352 Q + + L+ Q+ E+A+V +MEV+ K + +++RS + Sbjct: 1867 QLLEEELARLQREAAAATQKRQELEAELAKV----RAEMEVLLASKAKAEEESRSTSEKS 1922 Query: 353 DRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXX 412 + LE +A +L E + + EE + + + AE D + +A+ R AE Sbjct: 1923 KQRLEAEAGRFRELAEEAARLRALAEEAKR--QRQLAEEDAARQRAEAERVLAEKLAAIG 1980 Query: 413 XXXXXXXXXXYTSKY-----LKL-RLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESE 466 K +L RL+E E ++ EE AQ + + ++R S+ Sbjct: 1981 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKASD 2040 Score = 43.3 bits (101), Expect = 0.014 Identities = 35/221 (15%), Positives = 71/221 (32%), Gaps = 20/221 (9%) Query: 253 RGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-----SPSLENGEG 307 R E R ++ ++ + ++ A Q + +++ + Sbjct: 1492 RAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRIQEEVVRREEAAVDAQQQ 1551 Query: 308 GFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 I + + + A+ + A E+ R+ + + +LE + Sbjct: 1552 KRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRL--QLEATERQRGGAE 1609 Query: 368 MERQKKKPQIEELESIVRLKQAEADMFQLKA-DEA--RREAEXXXXXXXXXXXXXXXXYT 424 E Q + + EE E+ R Q EA+ + + DE+ +R+AE Sbjct: 1610 GELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQ 1669 Query: 425 S---KYLKLRLSEAEERRQYLFEELK-------AQENSQCD 455 +LRL E R E++ A E +Q Sbjct: 1670 RALQALEELRLQAEEAERWLCQAEVERARQVQVALETAQRS 1710 >gi|68357652|ref|XP_693359.1| PREDICTED: similar to fetal Alzheimer antigen isoform 2 [Danio rerio] Length = 2250 Score = 46.7 bits (110), Expect = 0.001 Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 22/101 (21%) Query: 158 VICSK-FDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACN 216 IC +D + +IGCD+CS+W H +C +G + K A M + + C C Sbjct: 2025 CICKTPYDESKF---YIGCDLCSNWYHGEC--------VGITEKEAKKMDD--YICSECK 2071 Query: 217 HTSELFGFVKDVFQHCAPNWDFEAL------IKELDFVRKI 251 E G ++++ C +D + R + Sbjct: 2072 RAQE--GNTEELYCICRTPYDESQFYIGCDRCQNWYHGRCV 2110 >gi|68379980|ref|XP_685116.1| PREDICTED: similar to MLL [Danio rerio] Length = 1904 Score = 46.7 bits (110), Expect = 0.001 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 12/71 (16%) Query: 125 RCRNIACQNLLPADDCDCDICSNKKGFCNLC--------MCVICSK-FDFASNTCRWIGC 175 RC+ +C P D S+ C+ C +C +C+K +D + + C Sbjct: 1662 RCK--SCGATKPGKAWDAQ-WSHDFSLCHDCAKRLTKGNLCPLCNKGYDDDDCDSKMMKC 1718 Query: 176 DVCSHWCHTDC 186 C W H C Sbjct: 1719 KKCDRWVHAKC 1729 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 46.7 bits (110), Expect = 0.001 Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ ++ E+ V+ + + A R + Sbjct: 132 RFQQVLISEPSIEDTIS--ILRGLKEKYEVHHGVRISDSALVAAAVLSNRYISE------ 183 Query: 351 ACDRELEDKA 360 R L DKA Sbjct: 184 ---RYLPDKA 190 >gi|50233868|ref|NP_055771.3| hypothetical protein LOC22897 [Homo sapiens] Length = 1460 Score = 46.7 bits (110), Expect = 0.001 Identities = 39/213 (18%), Positives = 80/213 (37%), Gaps = 31/213 (14%) Query: 244 ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFIL------MFFQECDS 297 L ++R + S A ++ + + ++KL+ +L A L M Q + Sbjct: 669 RLSWLRAQVQSSTQADEDQIRAEQEASLQKLREELESQQKAERASLEQKNRQMLEQLKEE 728 Query: 298 DSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMR-MFKKARSVLDACDREL 356 S ++ + A + A ++ E ++ ++ E++ ++ S L+A RE+ Sbjct: 729 IEASEKSEQAALNAAKEKALQQLREQLEGERKEAVATLEKEHSAELERLCSSLEAKHREV 788 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 V+ L+ + Q+ Q EE + L Q E + Q A E E Sbjct: 789 ------VSSLQKKIQE-AQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHEL--------- 832 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ 449 S L+ + E E + +++K + Sbjct: 833 --------SSLLREKRQEVEGEHERRLDKMKEE 857 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 46.7 bits (110), Expect = 0.001 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ + PS E+ ++ E+ V T + A+ R Sbjct: 132 RFQKVLVEEPSEEDTIA--ILRGLKERYEVHHKVAITDGAIIAAAKLSHRYI-------- 181 Query: 351 ACDRELEDKA 360 DR+L DKA Sbjct: 182 -TDRQLPDKA 190 >gi|73960799|ref|XP_863624.1| PREDICTED: similar to CDC42-binding protein kinase alpha isoform B isoform 7 [Canis familiaris] Length = 1781 Score = 46.7 bits (110), Expect = 0.001 Identities = 43/251 (17%), Positives = 76/251 (30%), Gaps = 35/251 (13%) Query: 229 FQHCAPNWDFEALIKE-LDFVRKIFRGSEDARGKKLFWKADELIEKLK-SKLIDPLDACN 286 A + L +E L+ RK+ ++ ++ L+ S PL A Sbjct: 439 LATEAYERRIKRLEQEKLELSRKLQESTQ-------------TVQALQYSTADGPLTASK 485 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDA-----CNEIAEVVQD------TARKMEVVA 335 L + + + Q E+ + + R ++ Sbjct: 486 D-LEIKTLKEEIENLRKQIRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIRTLQQER 544 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLK---MERQKKK----PQIEELESIVRLKQ 388 EE + +A L +EL+D C ME ++ Q ++L VR K+ Sbjct: 545 EELNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRDKE 604 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE-ELK 447 E D+ K + R+E +L E E E EL+ Sbjct: 605 EEVDLVMQKVESLRQELRRTERAKKELEVHTEAVAAEASKDRKLREQSEHYSKQLENELE 664 Query: 448 AQENSQCDFDP 458 + Q + P Sbjct: 665 GLKQKQISYSP 675 >gi|32261656|gb|AAP76706.1| ATP-dependent CLP protease ClpA [Helicobacter hepaticus ATCC 51449] Length = 859 Score = 46.7 bits (110), Expect = 0.001 Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 19/128 (14%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ + + PS+ E ++ E V T + A+ R Sbjct: 323 EKDAALTRRFQPINVNEPSIN--EALQILRGIKPNLEAHHNVNITDAALVAAAKLSSRYI 380 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEAD---MF 394 DR L DKA A +LKM+ + + ++ +++ + + E M Sbjct: 381 ---------TDRFLPDKAIDLIDEAAAELKMQIESEPLELSKIKKHIANLEVEKQALNME 431 Query: 395 QLKADEAR 402 + +EAR Sbjct: 432 KTNVNEAR 439 >gi|21203645|dbj|BAB94345.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2] Length = 818 Score = 46.3 bits (109), Expect = 0.002 Identities = 37/194 (19%), Positives = 64/194 (32%), Gaps = 55/194 (28%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS+ + ++ E + + +E + R Sbjct: 333 RFQPVQVDEPSVVDTVA--ILKGLRDRYEAHHRINISDEAIEAAVKLSNRYV-------- 382 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVR---------LKQAEADMFQLKAD-E 400 DR L DKA + I+E S VR LK+ E ++ ++K + + Sbjct: 383 -SDRFLPDKAIDL-------------IDEASSKVRLKSHTTPNNLKEIEQEIEKVKNEKD 428 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ-ENSQCDFDPM 459 A A+ LR + + +QY EE K + +N+Q Sbjct: 429 AAVHAQEF----------------ENAANLRDKQTKLEKQY--EEAKNEWKNAQNGMSTS 470 Query: 460 KMRMESEIRGLLKG 473 E +I ++ G Sbjct: 471 --LSEEDIAEVIAG 482 >gi|6850865|emb|CAB71104.1| putative protein [Arabidopsis thaliana] Length = 902 Score = 46.3 bits (109), Expect = 0.002 Identities = 20/88 (22%), Positives = 31/88 (35%), Gaps = 12/88 (13%) Query: 137 ADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCA-IREGLIKM 195 ++ C CS + + C IC + S+ W+ CD C W H +C I K Sbjct: 333 PEELLCKHCSKLRK--SNQYCGICKRIWHPSDDGDWVCCDGCDVWVHAECDNITNERFK- 389 Query: 196 GHSAKGASGMTEMLFHCIACNHTSELFG 223 + ++C C EL Sbjct: 390 --------ELEHNNYYCPDCKVQHELTP 409 >gi|74001175|ref|XP_857677.1| PREDICTED: similar to Intersectin 1 (SH3 domain-containing protein 1A) (SH3P17) isoform 5 [Canis familiaris] Length = 1149 Score = 46.3 bits (109), Expect = 0.002 Identities = 47/215 (21%), Positives = 75/215 (34%), Gaps = 50/215 (23%) Query: 257 DARGKKLFWKADELIEK---LKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAP 313 A+ K L ++ + L +K L+ KL D C QE +S + S E Sbjct: 472 KAKKKTLEFELEALNDKKHQLEGKLQD--IRCRLTTQR-QEIESTNKSRELRIAEITHLQ 528 Query: 314 QDACN------EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 Q + Q +++ V + + R L R LE K + Sbjct: 529 QQLQEAQQMLGRLIPEKQILNDQLKQVQQNSL-----HRDSLLTLKRALEAK-------E 576 Query: 368 MERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY 427 + RQ+ + Q++E+E R K E D+F + E R + Sbjct: 577 LARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELRE-----------------IHSKQQL 619 Query: 428 LKLRLSEAE-------ERRQYLFEELK--AQENSQ 453 K + EAE ER+ E+ K AQ +Q Sbjct: 620 QKQKSIEAERLKQKEQERKTIELEKQKEEAQRRAQ 654 >gi|38566922|emb|CAE76225.1| related to putative cytoplasmic structural protein [Neurospora crassa] Length = 2556 Score = 46.3 bits (109), Expect = 0.002 Identities = 37/194 (19%), Positives = 72/194 (37%), Gaps = 31/194 (15%) Query: 277 KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE 336 K+ D + + D+ + E+ L A + + + E VA Sbjct: 1522 KMDDKKVEETLYVPPQHQETVDTKAQEDQ----LKAQKVETERLEHEK----AEQERVAR 1573 Query: 337 EKMRMFKKARSVLDACDRE---LEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 EK ++ ++ + +RE LE K ER+K + + E E + R K A + Sbjct: 1574 EKAERAEREKAEREKAEREQVALEKAREKAEQEKAEREKAEREKAERERVEREK-AREKL 1632 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 Q + AR +AE K + R++ E R++ E+ + ++ + Sbjct: 1633 EQER--IAREKAEL-----------------EKAERERIAAEEARKKAELEKAELEKAER 1673 Query: 454 CDFDPMKMRMESEI 467 K R ++E+ Sbjct: 1674 ERIAAEKARKKAEL 1687 Score = 43.3 bits (101), Expect = 0.013 Identities = 43/201 (21%), Positives = 66/201 (32%), Gaps = 32/201 (15%) Query: 232 CAPNWDFEALIK-ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILM 290 L K EL+ + +E AR K KA+ +L+ + + A Sbjct: 1654 AEEARKKAELEKAELEKAERERIAAEKARKKAELEKAELEKAELEKAERERVAAEKARKK 1713 Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEK----MRMFKKAR 346 QE A + A E AE + +K E E+ + ++ R Sbjct: 1714 AEQEKAEQE------RVEREKAQEKALQEKAEQERIARKKAEQEKAERRKADLEKAERER 1767 Query: 347 SVL--------------DACDR---ELED-KACAVTDLKMERQKKKPQIEELESIVRLKQ 388 L R ELE K K +R++ K + E E I R K Sbjct: 1768 VALEEARKKAEEEKAEQKRISRKKAELEKAKQEKAEREKADRERAKQEKAEQERISREKA 1827 Query: 389 AEADMFQLKADE---ARREAE 406 + KA++ AR +AE Sbjct: 1828 EHEKAERDKAEQERVAREQAE 1848 Score = 42.9 bits (100), Expect = 0.022 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 12/187 (6%) Query: 278 LIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEE 337 D L A + ++ + + + + + E +E Sbjct: 1547 QEDQLKAQKVETERLEHEKAEQERVAREKAERAEREKAEREKAEREQVALEKAREKAEQE 1606 Query: 338 KMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV---RLKQAE---- 390 K K R + E E + ++ R+K + + E E I K+AE Sbjct: 1607 KAEREKAEREKAERERVEREKAREKLEQERIAREKAELEKAERERIAAEEARKKAELEKA 1666 Query: 391 ----ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEE 445 A+ ++ A++AR++AE K R E E+ Q E Sbjct: 1667 ELEKAERERIAAEKARKKAELEKAELEKAELEKAERERVAAEKARKKAEQEKAEQERVER 1726 Query: 446 LKAQENS 452 KAQE + Sbjct: 1727 EKAQEKA 1733 >gi|42567196|ref|NP_194520.3| PHD finger protein-related / SET domain-containing protein (TX4) [Arabidopsis thaliana] Length = 1027 Score = 46.3 bits (109), Expect = 0.002 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 12/88 (13%) Query: 132 QNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCA-IRE 190 ++L+P D C CS + +C IC K + W+ CD C H +C I + Sbjct: 378 KDLIPGDQLLCKPCSRLTK--SKHICGICKKIRNHLDNKSWVRCDGCKVRIHAECDQISD 435 Query: 191 GLIKMGHSAKGASGMTEMLFHCIACNHT 218 +K + E ++C C Sbjct: 436 RHLK---------DLRETDYYCPTCRAK 454 >AAA_Q96TW3_202-394_PF00004.17 Length = 193 Score = 46.3 bits (109), Expect = 0.002 Identities = 24/144 (16%), Positives = 44/144 (30%), Gaps = 21/144 (14%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP--L 282 +K V + + E +I +D + + + ++ + + + I L Sbjct: 58 LKAVLKEVKESE--EGIILFIDEIHTVLGAGKGEGSMDAANLLKPMLARGELRCIGATTL 115 Query: 283 DACNFILM------FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE 336 I FQ+ D PS+ ++ E V+ T + V A+ Sbjct: 116 TEYKVIEKDPAFERRFQKVDVGEPSVAATIS--ILRGLKERYESYHGVKITDSALVVAAQ 173 Query: 337 EKMRMFKKARSVLDACDRELEDKA 360 R R L DKA Sbjct: 174 LSDRYI---------TTRFLPDKA 188 >gi|71751458|ref|XP_824811.1| kinesin [Trypanosoma brucei] Length = 1456 Score = 46.3 bits (109), Expect = 0.002 Identities = 49/258 (18%), Positives = 86/258 (33%), Gaps = 44/258 (17%) Query: 242 IKELDFVRKIFRGSE------DARGKKLFWKADELIEKLKSKLIDPLDACNFILM----- 290 + LD +R+ + SE D R K+ + L ++LK D N + Sbjct: 736 EESLDTLRQQLKESEASVEDRDNRLKEHEESLNTLRQQLKESEASVEDRDNRLKEHETSL 795 Query: 291 --FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 Q+ S+E+ + E ++ ++ E E++ K+ + Sbjct: 796 DTLRQQLKESEASVEDRD-----NRLKEHEESLNTLRQQLKESEASVEDRDNRLKEHETS 850 Query: 349 LDACDRELEDKACAVTDLKMERQK--------KKPQIEELESIV-----RLKQAEAD--- 392 LD R+ ++ A + + R K + Q++E E+ V RLK+ E Sbjct: 851 LD-TLRQQLKESEASVEDRDNRLKEHETSLNTLRQQLKESEASVEDRDNRLKEHEESLNT 909 Query: 393 -MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQEN 451 QLK EA E L+ +L E+E + LK E Sbjct: 910 LRQQLKESEASVENRDNRLKEHEESL--------NTLRQQLKESEASVEDRDNRLKEHEE 961 Query: 452 SQCDFDPMKMRMESEIRG 469 S E+ + Sbjct: 962 SLNTLRQQLKESEASVED 979 Score = 45.6 bits (107), Expect = 0.003 Identities = 43/242 (17%), Positives = 81/242 (33%), Gaps = 36/242 (14%) Query: 242 IKELDFVRKIFRGSE------DARGKKLFWKADELIEKLKSKLIDPLDACNFILM----- 290 + L+ +R+ + SE D R K+ + L ++LK D N + Sbjct: 1016 EESLNTLRQQLKESEASVEDRDNRLKEHETSLNTLRQQLKESEASVEDRDNRLKEHETSL 1075 Query: 291 --FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 Q+ S+E+ + E + ++ ++ E E++ K+ Sbjct: 1076 DTLRQQLKESEASVEDRD-----NRLKEHEESLDTLRQQLKESEASVEDRDNRLKEHEES 1130 Query: 349 LDACDRELEDKACAVTDLKMERQK--------KKPQIEELESIV-----RLKQAEADMFQ 395 L R+ ++ A + + R K + Q++E E+ V RLK+ E + Sbjct: 1131 L-NTLRQQLKESEASVEDRDNRLKEHEESLDTLRQQLKESEASVEDRDNRLKEHETSLDT 1189 Query: 396 LKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD 455 L+ EA L+ +L E+E + LK E S Sbjct: 1190 LRQQLKESEASVEDRDNRLKEHEESL----NTLRQQLKESEASVEDRDNRLKEHETSLDT 1245 Query: 456 FD 457 Sbjct: 1246 LR 1247 Score = 45.2 bits (106), Expect = 0.004 Identities = 49/257 (19%), Positives = 88/257 (34%), Gaps = 42/257 (16%) Query: 242 IKELDFVRKIFRGSE------DARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQEC 295 + L+ +R+ + SE D R K+ + L ++LK D N +E Sbjct: 960 EESLNTLRQQLKESEASVEDRDNRLKEHEESLNTLRQQLKESEASVEDRDN----RLKEH 1015 Query: 296 DSDSPSLENGEGGFLIAPQDACNEIAE------VVQDTARKMEVVAEEKMRMFKKARSVL 349 + +L + +D N + E ++ ++ E E++ K+ + L Sbjct: 1016 EESLNTLRQQLKESEASVEDRDNRLKEHETSLNTLRQQLKESEASVEDRDNRLKEHETSL 1075 Query: 350 DACDRELEDKACAVTDLKMERQK--------KKPQIEELESIV-----RLKQAEAD---- 392 D R+ ++ A + + R K + Q++E E+ V RLK+ E Sbjct: 1076 D-TLRQQLKESEASVEDRDNRLKEHEESLDTLRQQLKESEASVEDRDNRLKEHEESLNTL 1134 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENS 452 QLK EA E L+ +L E+E + LK E S Sbjct: 1135 RQQLKESEASVEDRDNRLKEHEESLDT--------LRQQLKESEASVEDRDNRLKEHETS 1186 Query: 453 QCDFDPMKMRMESEIRG 469 E+ + Sbjct: 1187 LDTLRQQLKESEASVED 1203 Score = 41.3 bits (96), Expect = 0.059 Identities = 42/189 (22%), Positives = 71/189 (37%), Gaps = 34/189 (17%) Query: 233 APNWDFEALIKE----LDFVRKIFRGSE------DARGKKLFWKADELIEKLKSKLIDPL 282 A D + +KE LD +R+ + SE D R K+ D L ++LK Sbjct: 1059 ASVEDRDNRLKEHETSLDTLRQQLKESEASVEDRDNRLKEHEESLDTLRQQLKESEASVE 1118 Query: 283 DACNFILM-------FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 D N + Q+ S+E+ + E + ++ ++ E Sbjct: 1119 DRDNRLKEHEESLNTLRQQLKESEASVEDRD-----NRLKEHEESLDTLRQQLKESEASV 1173 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ 395 E++ K+ + LD R+ ++ A + + R K E ES+ L+Q Q Sbjct: 1174 EDRDNRLKEHETSLD-TLRQQLKESEASVEDRDNRLK-----EHEESLNTLRQ------Q 1221 Query: 396 LKADEARRE 404 LK EA E Sbjct: 1222 LKESEASVE 1230 Score = 37.9 bits (87), Expect = 0.70 Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 34/177 (19%) Query: 242 IKELDFVRKIFRGSE------DARGKKLFWKADELIEKLKSKLIDPLDACNFILM----- 290 + L+ +R+ + SE D R K+ D L ++LK D N + Sbjct: 1128 EESLNTLRQQLKESEASVEDRDNRLKEHEESLDTLRQQLKESEASVEDRDNRLKEHETSL 1187 Query: 291 --FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 Q+ S+E+ + E ++ ++ E E++ K+ + Sbjct: 1188 DTLRQQLKESEASVEDRD-----NRLKEHEESLNTLRQQLKESEASVEDRDNRLKEHETS 1242 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 LD ++L++ V L + LKQ E +MF +AD R A Sbjct: 1243 LDTLRQQLKESETTVVVLTAD----------------LKQLEEEMFIDQADLKERIA 1283 >gi|50748728|ref|XP_421380.1| PREDICTED: similar to KIAA1124 protein [Gallus gallus] Length = 2398 Score = 46.3 bits (109), Expect = 0.002 Identities = 51/278 (18%), Positives = 100/278 (35%), Gaps = 46/278 (16%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRG-------SEDARG-KKLFWKAD 268 +TS++ G+ K + + D ++E + +G + R KKL + + Sbjct: 744 NTSQIEGYEKKIRKLEQEKQDLNRKLQESTQTVQSLQGPACVTVNTNRDREIKKLNEEIE 803 Query: 269 ELIEKL--KSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 L KL SKL L ++C + L + C + + +D Sbjct: 804 RLKNKLTDVSKLEGQLADAVAFRQEHEDC--------MHKLKGL---EKQCRVLRQEKED 852 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD---RELEDKACAVTDLKMERQKKKPQIEELESI 383 +++ +E K+ R +E + + + +L+ ++QK Q+ + E Sbjct: 853 LHKQLVEASERLKTQSKELRDAHQQRKLAVQEFSELSERMGELRSQKQKLSRQLRDKEEE 912 Query: 384 VR--LKQAEADMFQLKADE-ARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEER 438 V L++ +A ++ E R+E E SK KLR ++ Sbjct: 913 VEMSLQKNDAMRQDIRKSEKIRKELESQLEEVMAE--------ASKERKLREHSEVFCKQ 964 Query: 439 RQYLFEELKAQENS---------QCDFDPMKMRMESEI 467 + E LK ++ Q + MK +E +I Sbjct: 965 LENELEALKVKQGGRAAGATLEHQQELSKMKAELEKKI 1002 >gi|32419136|ref|XP_330046.1| hypothetical protein [Neurospora crassa] Length = 2479 Score = 45.9 bits (108), Expect = 0.002 Identities = 37/194 (19%), Positives = 72/194 (37%), Gaps = 31/194 (15%) Query: 277 KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE 336 K+ D + + D+ + E+ L A + + + E VA Sbjct: 1445 KMDDKKVEETLYVPPQHQETVDTKAQEDQ----LKAQKVETERLEHEK----AEQERVAR 1496 Query: 337 EKMRMFKKARSVLDACDRE---LEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 EK ++ ++ + +RE LE K ER+K + + E E + R K A + Sbjct: 1497 EKAERAEREKAEREKAEREQVALEKAREKAEQEKAEREKAEREKAERERVEREK-AREKL 1555 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 Q + AR +AE K + R++ E R++ E+ + ++ + Sbjct: 1556 EQER--IAREKAEL-----------------EKAERERIAAEEARKKAELEKAELEKAER 1596 Query: 454 CDFDPMKMRMESEI 467 K R ++E+ Sbjct: 1597 ERIAAEKARKKAEL 1610 Score = 43.3 bits (101), Expect = 0.015 Identities = 43/201 (21%), Positives = 66/201 (32%), Gaps = 32/201 (15%) Query: 232 CAPNWDFEALIK-ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILM 290 L K EL+ + +E AR K KA+ +L+ + + A Sbjct: 1577 AEEARKKAELEKAELEKAERERIAAEKARKKAELEKAELEKAELEKAERERVAAEKARKK 1636 Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEK----MRMFKKAR 346 QE A + A E AE + +K E E+ + ++ R Sbjct: 1637 AEQEKAEQE------RVEREKAQEKALQEKAEQERIARKKAEQEKAERRKADLEKAERER 1690 Query: 347 SVL--------------DACDR---ELED-KACAVTDLKMERQKKKPQIEELESIVRLKQ 388 L R ELE K K +R++ K + E E I R K Sbjct: 1691 VALEEARKKAEEEKAEQKRISRKKAELEKAKQEKAEREKADRERAKQEKAEQERISREKA 1750 Query: 389 AEADMFQLKADE---ARREAE 406 + KA++ AR +AE Sbjct: 1751 EHEKAERDKAEQERVAREQAE 1771 Score = 42.5 bits (99), Expect = 0.025 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 12/187 (6%) Query: 278 LIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEE 337 D L A + ++ + + + + + E +E Sbjct: 1470 QEDQLKAQKVETERLEHEKAEQERVAREKAERAEREKAEREKAEREQVALEKAREKAEQE 1529 Query: 338 KMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV---RLKQAE---- 390 K K R + E E + ++ R+K + + E E I K+AE Sbjct: 1530 KAEREKAEREKAERERVEREKAREKLEQERIAREKAELEKAERERIAAEEARKKAELEKA 1589 Query: 391 ----ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEE 445 A+ ++ A++AR++AE K R E E+ Q E Sbjct: 1590 ELEKAERERIAAEKARKKAELEKAELEKAELEKAERERVAAEKARKKAEQEKAEQERVER 1649 Query: 446 LKAQENS 452 KAQE + Sbjct: 1650 EKAQEKA 1656 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 45.9 bits (108), Expect = 0.002 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ P++E+ ++ E+ V+ + + A R Sbjct: 132 RFQPVYVSEPTVEDTIS--ILRGIKEKYELHHAVRISDSAIVAAATLSNRYI-------- 181 Query: 351 ACDRELEDKA 360 DR L DKA Sbjct: 182 -TDRYLPDKA 190 >gi|66501221|ref|XP_623473.1| PREDICTED: similar to CG10897-PA, isoform A [Apis mellifera] Length = 1787 Score = 45.9 bits (108), Expect = 0.002 Identities = 36/178 (20%), Positives = 65/178 (36%), Gaps = 41/178 (23%) Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD-LKME 369 A + A E + E E+ ++ R + + E K + +++E Sbjct: 489 YAKKLAKEEAQRHKEQARLIKEQEKTERQEAVRREREIRNQQLLEARKKRQEEVEKIRLE 548 Query: 370 RQKKKPQIEELES--IVRLKQAEAD-----MFQLKADEARREAEXXXXXXXXXXXXXXXX 422 Q++K Q EL+ V LK+ E + M ++A E RR+ Sbjct: 549 EQQRKQQERELKRQQAVMLKEQERERRRQHMALVRALENRRKM----------------- 591 Query: 423 YTSKYLKLRLSEAEERRQYLFE---ELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 EER + E E A + + + M+M + +IR ++ ME+T Sbjct: 592 -------------EEREKKRLEARAERIATKEKRAEQRKMEMELIEQIRKPVEDMELT 636 >gi|73960805|ref|XP_537229.2| PREDICTED: similar to CDC42-binding protein kinase alpha isoform B isoform 1 [Canis familiaris] Length = 1754 Score = 45.9 bits (108), Expect = 0.002 Identities = 43/251 (17%), Positives = 76/251 (30%), Gaps = 35/251 (13%) Query: 229 FQHCAPNWDFEALIKE-LDFVRKIFRGSEDARGKKLFWKADELIEKLK-SKLIDPLDACN 286 A + L +E L+ RK+ ++ ++ L+ S PL A Sbjct: 439 LATEAYERRIKRLEQEKLELSRKLQESTQ-------------TVQALQYSTADGPLTASK 485 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDA-----CNEIAEVVQD------TARKMEVVA 335 L + + + Q E+ + + R ++ Sbjct: 486 D-LEIKTLKEEIENLRKQIRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIRTLQQER 544 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLK---MERQKKK----PQIEELESIVRLKQ 388 EE + +A L +EL+D C ME ++ Q ++L VR K+ Sbjct: 545 EELNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRDKE 604 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE-ELK 447 E D+ K + R+E +L E E E EL+ Sbjct: 605 EEVDLVMQKVESLRQELRRTERAKKELEVHTEAVAAEASKDRKLREQSEHYSKQLENELE 664 Query: 448 AQENSQCDFDP 458 + Q + P Sbjct: 665 GLKQKQISYSP 675 >gi|50311735|ref|XP_455896.1| unnamed protein product [Kluyveromyces lactis] Length = 899 Score = 45.9 bits (108), Expect = 0.002 Identities = 35/168 (20%), Positives = 58/168 (34%), Gaps = 31/168 (18%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P+ ++ EI V+ + A+ R R L Sbjct: 337 RFQKIDVPEPTTRQTVA--ILRGLQPKYEIHHGVRILDSALVSAAQLAKRYLPYRR--LP 392 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXX 410 +L D +CA + + R K +++ E + L Q E +KA E E + Sbjct: 393 DSAIDLVDISCAG--VAVARDSKPEELDNKERELHLLQVE-----IKALERDEETDPTT- 444 Query: 411 XXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ-ENSQCDFD 457 K RL +A ++ L EEL+ + Q + D Sbjct: 445 ------------------KERLQQARQKEASLIEELEPMRQRYQQEVD 474 >gi|55655772|ref|XP_531442.1| PREDICTED: similar to intersectin 1 isoform ITSN-l; SH3 domain protein-1A; human intersectin-SH3 domain-containing protein SH3P17; Src homology 3 domain-containing protein [Pan troglodytes] Length = 1229 Score = 45.9 bits (108), Expect = 0.002 Identities = 45/207 (21%), Positives = 73/207 (35%), Gaps = 45/207 (21%) Query: 257 DARGKKLFWKADELIEK---LKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAP 313 A+ K L ++ + L +K L+ KL D C QE +S + S E Sbjct: 440 KAKKKTLEFELEALNDKKHQLEGKLQD--IRCRLTTQR-QEIESTNKSRELRIAEITHLQ 496 Query: 314 QDACN------EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 Q + Q +++ V + + R L R LE K + Sbjct: 497 QQLQESQQMLGRLIPEKQILNDQLKQVQQNSL-----HRDSLVTLKRALEAK-------E 544 Query: 368 MERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY 427 + RQ+ + Q++E+E R K E D+F + E R + Sbjct: 545 LARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELRE-----------------IHNKQQL 587 Query: 428 LKLRLSEAEERRQYLFE----ELKAQE 450 K + EAE +Q E EL+ Q+ Sbjct: 588 QKQKSMEAERLKQKEQERKIIELEKQK 614 >gi|55656928|ref|XP_514872.1| PREDICTED: similar to intersectin 1 isoform ITSN-l; SH3 domain protein-1A; human intersectin-SH3 domain-containing protein SH3P17; Src homology 3 domain-containing protein [Pan troglodytes] Length = 2090 Score = 45.9 bits (108), Expect = 0.002 Identities = 45/207 (21%), Positives = 73/207 (35%), Gaps = 45/207 (21%) Query: 257 DARGKKLFWKADELIEK---LKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAP 313 A+ K L ++ + L +K L+ KL D C QE +S + S E Sbjct: 485 KAKKKTLEFELEALNDKKHQLEGKLQD--IRCRLTTQR-QEIESTNKSRELRIAEITHLQ 541 Query: 314 QDACN------EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 Q + Q +++ V + + R L R LE K + Sbjct: 542 QQLQESQQMLGRLIPEKQILNDQLKQVQQNSL-----HRDSLVTLKRALEAK-------E 589 Query: 368 MERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY 427 + RQ+ + Q++E+E R K E D+F + E R + Sbjct: 590 LARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELRE-----------------IHNKQQL 632 Query: 428 LKLRLSEAEERRQYLFE----ELKAQE 450 K + EAE +Q E EL+ Q+ Sbjct: 633 QKQKSMEAERLKQKEQERKIIELEKQK 659 >gi|73960797|ref|XP_863599.1| PREDICTED: similar to CDC42-binding protein kinase alpha isoform B isoform 6 [Canis familiaris] Length = 1728 Score = 45.9 bits (108), Expect = 0.002 Identities = 43/251 (17%), Positives = 76/251 (30%), Gaps = 35/251 (13%) Query: 229 FQHCAPNWDFEALIKE-LDFVRKIFRGSEDARGKKLFWKADELIEKLK-SKLIDPLDACN 286 A + L +E L+ RK+ ++ ++ L+ S PL A Sbjct: 439 LATEAYERRIKRLEQEKLELSRKLQESTQ-------------TVQALQYSTADGPLTASK 485 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDA-----CNEIAEVVQD------TARKMEVVA 335 L + + + Q E+ + + R ++ Sbjct: 486 D-LEIKTLKEEIENLRKQIRESSHLEQQLEEANSVRRELDDAFRQIKAYEKQIRTLQQER 544 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLK---MERQKKK----PQIEELESIVRLKQ 388 EE + +A L +EL+D C ME ++ Q ++L VR K+ Sbjct: 545 EELNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERLTELHTQKQKLARHVRDKE 604 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE-ELK 447 E D+ K + R+E +L E E E EL+ Sbjct: 605 EEVDLVMQKVESLRQELRRTERAKKELEVHTEAVAAEASKDRKLREQSEHYSKQLENELE 664 Query: 448 AQENSQCDFDP 458 + Q + P Sbjct: 665 GLKQKQISYSP 675 >gi|6648214|gb|AAF21212.1| unknown protein [Arabidopsis thaliana] Length = 764 Score = 45.9 bits (108), Expect = 0.002 Identities = 28/129 (21%), Positives = 41/129 (31%), Gaps = 18/129 (13%) Query: 125 RCRNIACQNLLPADDCDCD-----ICSNKKG--FCNLCMCVICSKFDFASNTCRWIGCDV 177 RC +C + +P + C + G F C +C K S + + CD+ Sbjct: 249 RCH--SCDSTVPGNGLSVRWFLSYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDI 306 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNW- 236 C W H C M G + C C VKD+ W Sbjct: 307 CQRWVHCHCDGISDDKYMQFQVDGKL-----QYKCATCRGE---CYQVKDLQDAVQELWK 358 Query: 237 DFEALIKEL 245 + + KEL Sbjct: 359 KKDVVDKEL 367 >gi|13345187|gb|AAK19244.1| reticulocyte binding protein 2 homolog A [Plasmodium falciparum] Length = 3130 Score = 45.9 bits (108), Expect = 0.002 Identities = 29/151 (19%), Positives = 59/151 (39%), Gaps = 32/151 (21%) Query: 308 GFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD---ACDRELEDKACAVT 364 L + E E + ++ E+ +E+ R+ K+ +E E K Sbjct: 2751 EELKRQEQERLER-EKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQE 2809 Query: 365 DLKMERQKKKPQIEEL-----ESIVR---LKQAEADMFQLKADEARREAEXXXXXXXXXX 416 L+ E+Q++ + EEL E + + LK+ E + Q + + R+E E Sbjct: 2810 RLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQE---------- 2859 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + ++ A ER Q++ +L+ Sbjct: 2860 ---------RLERKKIELA-EREQHIKSKLE 2880 Score = 41.7 bits (97), Expect = 0.039 Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 5/116 (4%) Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 +E+ R+ K+ +R LE + L+ E + K+ + E L+ LK+ E + Sbjct: 2741 RQEQERLQKEEELKRQEQER-LEREKQE--QLQKEEELKRQEQERLQKEEALKRQEQERL 2797 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE 450 Q + + R+E E + + RL + E ++ E L+ +E Sbjct: 2798 QKEEELKRQEQERLEREKQEQLQKEEEL--KRQEQERLQKEEALKRQEQERLQKEE 2851 >gi|54308345|ref|YP_129365.1| Putative ATP-dependent Clp protease, ATP-binding subunit ClpA [Photobacterium profundum SS9] Length = 756 Score = 45.9 bits (108), Expect = 0.003 Identities = 21/110 (19%), Positives = 41/110 (37%), Gaps = 19/110 (17%) Query: 283 DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + + FQ+ D PSL++ ++ E V+ T + + E + Sbjct: 334 EKERALSRRFQKIDVIEPSLDDTT--KILMGLKPKYEAHHEVRFTNKAIRAAVELSAKYI 391 Query: 343 KKARSVLDACDRELEDKA-----CAVTDLKME---RQKKKPQIEELESIV 384 + R L DKA A ++ R+KK + ++ES++ Sbjct: 392 NE---------RHLPDKAIDVIDEAGARCRLAPASRRKKTVNVSDIESMI 432 >gi|62658902|ref|XP_213777.3| PREDICTED: huntingtin interacting protein 1 related [Rattus norvegicus] Length = 2653 Score = 45.6 bits (107), Expect = 0.003 Identities = 44/262 (16%), Positives = 83/262 (31%), Gaps = 52/262 (19%) Query: 227 DVFQHCAPNWD--------FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKL 278 ++ + +L EL+ RK + + + + +LK+ Sbjct: 1792 ELEKIKMEAQRYISQLKGQVNSLEAELEEQRK-----QKQKALVDNEQLRHELAQLKALQ 1846 Query: 279 ----------IDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTA 328 + + + + L N L Q+ E+A V + A Sbjct: 1847 LEGARNQGLREEAERKASATEARYSKLKEKHNELINTHAELLRKSQE---EVARVKEQLA 1903 Query: 329 RKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQ 388 +ME V E ++ L+ REL KA + + + + EL S + Sbjct: 1904 FQMEQVKRESEMKMEEQSDQLEKLKRELVAKAGELAHAQEALSRTEQSGSELSSRLDTLN 1963 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 AE + +REAE S E+ + L +E Sbjct: 1964 AEKEALSGA--IRQREAELLAAQ---------------------SLVREKEEALSQE--- 1997 Query: 449 QENSQCDFDPMKMRMESEIRGL 470 Q+ S + ++ R+ ++RGL Sbjct: 1998 QQRSAQEKGELQGRLAEKVRGL 2019 >gi|12644130|sp|P15924|DESP_HUMAN Desmoplakin (DP) (250/210 kDa paraneoplastic pemphigus antigen) Length = 2871 Score = 45.6 bits (107), Expect = 0.003 Identities = 38/222 (17%), Positives = 94/222 (42%), Gaps = 18/222 (8%) Query: 241 LIKELDFVRKIFRGSEDA-RGKKLFWKADELIEKLK------SKLIDPLDACNFILMFFQ 293 + +EL+ +++ SED+ + KKL + + + LK + L L+ + + + Sbjct: 1573 VEEELNRLKR--TASEDSCKRKKLEEELEGMRRSLKEQAIKITNLTQQLEQASIVKKRSE 1630 Query: 294 ECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACD 353 + + +G Q+ ++ V+ R++ E K+A + Sbjct: 1631 DDLRQQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLLQEQES----VKQAHLRNEHFQ 1686 Query: 354 RELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR---EAEXXXX 410 + +EDK+ ++ + K+E ++ + E L + + E +L+ D+ RR EA+ Sbjct: 1687 KAIEDKSRSLNESKIEIERLQSLTENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSDKN 1746 Query: 411 XXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQE 450 ++ L+L+ +++ + R+ L +E++ + Sbjct: 1747 ATILELRSQLQISNNRTLELQGLINDLQRERENLRQEIEKFQ 1788 >gi|57241181|ref|ZP_00369128.1| clpB protein VC0711 [Campylobacter lari RM2100] Length = 857 Score = 45.6 bits (107), Expect = 0.003 Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 16/118 (13%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + PS+ E ++ EI V + A+ R Sbjct: 332 RFQPVNVAEPSVN--EALAMLRGIKEKLEIHHNVTINDSALVAAAKLSKRYI-------- 381 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 +R L DKA A +LKM+ + + + ++ + + E + +++ +EA Sbjct: 382 -ANRFLPDKAIDLIDEAAAELKMQIESEPNSLRKVRKQIESLEVENEALKMEENEANE 438 >gi|61845624|ref|XP_582529.1| PREDICTED: similar to SKI, partial [Bos taurus] Length = 264 Score = 45.6 bits (107), Expect = 0.003 Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 9/59 (15%) Query: 260 GKKLFWKADELIEKLKSKLIDPLDACNF----ILMFFQECDSDSPSLE-----NGEGGF 309 L + + L + L+ L F + M ++ + S +L+ + EG F Sbjct: 158 SSGLEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLSAALQAKRSLHQEGFF 216 >gi|71412310|ref|XP_808346.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 793 Score = 45.6 bits (107), Expect = 0.003 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 6/132 (4%) Query: 341 MFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 K+ R + + LE + L+ E+++K+ + EE E + +AE + +L+A+E Sbjct: 483 EAKQRRMAAEKERKRLEAEEKERKRLEAEKERKRLEAEEKER--KRLEAEKERKRLEAEE 540 Query: 401 ARR---EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFD 457 R EAE + + RL EAEE+ Q ++ E Sbjct: 541 KERRRLEAEKERKRLEAEEKERRRLEAEEKERKRL-EAEEKEQRKEQQHARGEEGVTGGK 599 Query: 458 PMKMRMESEIRG 469 ++R + + G Sbjct: 600 SQELRSQRRVSG 611 >gi|476894|pir||A46598 transforming protein c-ski - chicken (fragments) Length = 101 Score = 45.2 bits (106), Expect = 0.003 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 34/108 (31%) Query: 297 SDSPSLENGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRE 355 + + E FL +A ++ E E ++ +++E + E + K+ Sbjct: 10 LQAKRSLHQELEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKE----------- 58 Query: 356 LEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 QIE+L+ V+L+ AEAD QL+AD R Sbjct: 59 --------------------QIEDLQ--VKLQHAEADREQLRADLLRE 84 >gi|3004551|gb|AAC09024.1| hypothetical protein [Arabidopsis thaliana] Length = 417 Score = 45.2 bits (106), Expect = 0.004 Identities = 5/57 (8%), Positives = 17/57 (29%), Gaps = 2/57 (3%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLD 283 + K+ +G++ + ++ + LK++ P+ Sbjct: 104 KQLIIANEERRVGVFCYRILLAHKLLKGTKKYIIVS--EEVEKAVMHLKNEFGVPIS 158 >gi|73979827|ref|XP_532890.2| PREDICTED: similar to intersectin 2 isoform 3 isoform 1 [Canis familiaris] Length = 1668 Score = 45.2 bits (106), Expect = 0.004 Identities = 42/240 (17%), Positives = 93/240 (38%), Gaps = 34/240 (14%) Query: 250 KIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGG- 308 ++ + ++ + L + D I ++K + D N ++ E + ++N + G Sbjct: 513 RLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQDYQNKLIYLVPEKQLLNERIKNMQLGN 572 Query: 309 -------FLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKAC 361 L E+ + +++ +E K+ + L +EL ++ Sbjct: 573 TPDLGIGLLHKKSLEKEELCQRLKEQLDALEKETASKLSEMDSFNNQL----KELR-ESY 627 Query: 362 AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXX 421 L +E+ K + ++L+ I R K++E + DEA R+A+ Sbjct: 628 NTQQLALEQLHKIKR-DKLKEIER-KRSELIQKKKLEDEAIRKAKQGK------------ 673 Query: 422 XYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD---FDPMKMRMESEIR-GLLKGMEMT 477 + L + EE +Q +E KAQE Q + + + + + ++R +LK + Sbjct: 674 ---ENLWRESLRKEEEEKQKRLQEEKAQEKVQEEERKVEEKQCKDKDKMRVEVLKQHPAS 730 >gi|67517159|ref|XP_658462.1| hypothetical protein AN0858.2 [Aspergillus nidulans FGSC A4] Length = 927 Score = 45.2 bits (106), Expect = 0.004 Identities = 33/182 (18%), Positives = 51/182 (28%), Gaps = 53/182 (29%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEV-VQDTARKMEVVAEEKMRMFKKARSVL 349 FQ+ P++ ++ E+ V+ + A R Sbjct: 351 RFQQVLVKEPTVSETIS--ILRGLKEKYEVHHGSVRILDAAIVTAATLAARYL------- 401 Query: 350 DACDRELEDKACAVTDLKMERQ-----KKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R L D A + D + ++ LE R Q E + + DEA Sbjct: 402 --TARRLPDSAVDLIDEAAAAVRVARESEPEALDNLERKHRQLQIEIHALKREKDEAS-- 457 Query: 405 AEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRME 464 K RL AE+ + EEL PM+ + E Sbjct: 458 ------------------------KARLQAAEQEAANVIEEL----------RPMRQKYE 483 Query: 465 SE 466 SE Sbjct: 484 SE 485 >gi|44889002|sp|P31540|HSP98_NEUCR Heat shock protein HSP98 Length = 927 Score = 44.8 bits (105), Expect = 0.005 Identities = 32/176 (18%), Positives = 52/176 (29%), Gaps = 21/176 (11%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+ ++ E+ V + + A R Sbjct: 351 RFQQVIVKEPSVSETIS--ILRGLKEKYEVHHGVTISDAAIVAAANLAARYL-------- 400 Query: 351 ACDRELEDKACAVTDLKMERQ-----KKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R L D A + D + I+ LE +R + E + DEA + Sbjct: 401 -TSRRLPDSAIDLIDEAAAAVRVARESQPEIIDSLERKLRQLKIEIHALSREKDEASKAR 459 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEEL--KAQENSQCDFD 457 KY K R ++A + + E L KA+E S+ Sbjct: 460 LEQAKKDAENVEEELRPLREKYEQEKQR-AKALQEARMKLESLRQKAEEASRMGDH 514 >gi|13814451|gb|AAK41495.1| Microtubule binding protein, putative [Sulfolobus solfataricus P2] Length = 464 Score = 44.8 bits (105), Expect = 0.005 Identities = 38/212 (17%), Positives = 82/212 (38%), Gaps = 10/212 (4%) Query: 266 KADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 K +E +KL+ + + ++A + + + LE + A + I + ++ Sbjct: 119 KLEESTKKLEQAVQELIEAQKKHDERITKLEESTKKLEQAVQELIEAQKKHDERITK-LE 177 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 ++ +K+E +E + KK + + + AV +L ++K +I +LE + Sbjct: 178 ESTKKLEQAVQELIEAQKKHDERITKLEESTKKLEQAVQELIEAQKKHDERITKLEESTK 237 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQ 440 + +A ++A + E + KL +L EA++R Sbjct: 238 KLE-QAVQELIEAQKKHDERITKLEESIQKLVDAQRRAEERIAKLENAVEQLVEAQKRTD 296 Query: 441 YLFEELKAQENSQCDFDPMKMRMESEIRGLLK 472 E + E ++ M++EIR L K Sbjct: 297 ---ERITKLEEVTMKLVESQLGMQNEIRELRK 325 Score = 42.1 bits (98), Expect = 0.030 Identities = 39/251 (15%), Positives = 87/251 (34%), Gaps = 17/251 (6%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 + D E + K + V ++ + + K +E +KL+ + Sbjct: 48 DKLKSSVDQLVDAQR-RAEERIAKLENAVEQLVEAQKRTDER--ITKLEESTKKLEQAVQ 104 Query: 280 DPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKM 339 + ++A + + + LE + A + I + ++++ +K+E +E + Sbjct: 105 ELIEAQKKHDERITKLEESTKKLEQAVQELIEAQKKHDERITK-LEESTKKLEQAVQELI 163 Query: 340 RMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD 399 KK + + + AV +L + Q + E I +L+++ + Q A Sbjct: 164 EAQKKHDERITKLEESTKKLEQAVQELI------EAQKKHDERITKLEESTKKLEQ--AV 215 Query: 400 EARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPM 459 + EA+ T K + E ++++ E + E S Sbjct: 216 QELIEAQKKHDERITKLEES----TKKLEQAVQELIEAQKKHD-ERITKLEESIQKLVDA 270 Query: 460 KMRMESEIRGL 470 + R E I L Sbjct: 271 QRRAEERIAKL 281 >gi|52001792|gb|AAU21734.1| class III stress response-related ATPase [Bacillus licheniformis ATCC 14580] Length = 810 Score = 44.8 bits (105), Expect = 0.005 Identities = 41/179 (22%), Positives = 60/179 (33%), Gaps = 33/179 (18%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ D PS E E ++ E V T +E + R Sbjct: 333 RFQPIQVDQPSPE--ESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYI-------- 382 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA----DMFQLKADEARREAE 406 DR L DKA + I+E S VRL+ + K DE R+E + Sbjct: 383 -SDRFLPDKAIDL-------------IDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKD 428 Query: 407 XXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 + + RL E E + ++E + QENS+ D + M + S Sbjct: 429 AAVQSQEFEKAASL-----RDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVVSS 482 >gi|3859855|gb|AAC78611.1| intersectin long form [Homo sapiens] Length = 1721 Score = 44.4 bits (104), Expect = 0.006 Identities = 45/207 (21%), Positives = 72/207 (34%), Gaps = 45/207 (21%) Query: 257 DARGKKLFWKADELIEK---LKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAP 313 A+ K L ++ + L +K L+ KL D C QE +S + S E Sbjct: 472 KAKKKTLEFELEALNDKKHQLEGKLQD--IRCRLTTQR-QEIESTNKSRELRIAEITHLQ 528 Query: 314 QDACN------EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 Q + Q +++ V + + R L R LE K + Sbjct: 529 QQLQESQQMLGRLIPEKQILNDQLKQVQQNSL-----HRDSLVTLKRALEAK-------E 576 Query: 368 MERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY 427 + RQ + Q++E+E R K E D+F + E R + Sbjct: 577 LARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELRE-----------------IHNKQQL 619 Query: 428 LKLRLSEAEERRQYLFE----ELKAQE 450 K + EAE +Q E EL+ Q+ Sbjct: 620 QKQKSMEAERLKQKEQERKIIELEKQK 646 >gi|73964054|ref|XP_547990.2| PREDICTED: similar to CDC42-binding protein kinase beta isoform 1 [Canis familiaris] Length = 1676 Score = 44.4 bits (104), Expect = 0.006 Identities = 47/214 (21%), Positives = 79/214 (36%), Gaps = 38/214 (17%) Query: 225 VKDVFQHCAPNWDFEALIKE-LDFVRKI---------FRGSEDARGKKLF----WKADEL 270 +++ Q A L +E L+ RK+ GS A G K +E Sbjct: 434 LENSLQVEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSTRALGSSARDKEIKKLNEE 493 Query: 271 IEKLKSKLIDP---LDACNFILMFFQECDSDSPSLENGEGG-FLIAPQDA-----CNEIA 321 IE+LK+K+ D + QE + + L+ E ++ + E + Sbjct: 494 IERLKNKIADSNRLERQLEDTVTLRQEHEDSTHRLKGLEKQYRVVRQEKEVFHKQLVEAS 553 Query: 322 EVVQDTARKMEVV-----------AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER 370 E ++ AR+++ +E RM + RS R+L DK V + Sbjct: 554 ERLKSQARELKDAHQQRKLALQEFSELNERMA-ELRSQKQKVSRQLRDKEEEVEVAMQKI 612 Query: 371 QKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 + +I + E K+ EA + A EA RE Sbjct: 613 DSMRQEIRKSEKF--RKELEARLEDAVA-EASRE 643 Score = 37.9 bits (87), Expect = 0.68 Identities = 47/265 (17%), Positives = 89/265 (33%), Gaps = 24/265 (9%) Query: 222 FGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 +++ + + L E + VR+ S K + + + Sbjct: 677 LEHQQEISKIKSELEKK-VLFYEEELVRR--EASHVLEVKNVKKEVHD-------SESHQ 726 Query: 282 LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRM 341 L +LM ++ S + E + E + + + + E R+ Sbjct: 727 LALQKEVLM-LKDKLEKSKRERHTEMEEAVGTVREKYERERGM--LLEENKKLTAENERL 783 Query: 342 FKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA 401 L A +R+LED+ + K + QI E+ V ++ Q A + Sbjct: 784 CS-FVDKLTAQNRQLEDELQDLAAKKESVAHWEAQIAEIIQWVSDEKDARGYLQALASKM 842 Query: 402 RREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS---------EAEER-RQYLFEELKAQEN 451 E E + KL +S EAE R +Q + EEL+ ++ Sbjct: 843 TEELETLRSSSLGSRALDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVQEELRKVKD 902 Query: 452 SQCDFDPMKMRMESEIRGLLKGMEM 476 + F+ E++ R LL+ ME+ Sbjct: 903 TNLSFESKLKDSEAKNRELLEEMEI 927 >gi|71024695|ref|XP_762577.1| hypothetical protein UM06430.1 [Ustilago maydis 521] Length = 918 Score = 44.4 bits (104), Expect = 0.006 Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 6/115 (5%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ + P++E+ ++ E+ V+ + A+ R R L Sbjct: 348 RFQSILVNEPTVEDCIA--ILRGIRDKYEVHHGVRILDSAIVSAAQLAKRYLTDRR--LP 403 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 +L D+ACA D+++ R+ ++++LE + + D +++ Sbjct: 404 DSAIDLVDEACA--DVRVSRETVPEEVDKLERKRLQLEIAVHALSREKDAQSKQS 456 >gi|57228420|gb|AAW44877.1| chaperone, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 834 Score = 44.4 bits (104), Expect = 0.006 Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 24/138 (17%) Query: 267 ADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 DE + ++ + FQ + PS+E+ ++ + E+ VQ Sbjct: 228 LDEYRKSIEKD--------AALQRRFQPIMINEPSVESTIS--ILRGLKSRFEVHFGVQI 277 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELE 381 + A R DR L DKA A + LK+ ++ + ++E+L+ Sbjct: 278 ADSALVTAAVYSDRYI---------SDRFLPDKAIDLVDEASSALKLAQESRPTELEKLD 328 Query: 382 SIVRLKQAEADMFQLKAD 399 + E + + + D Sbjct: 329 RETVTLEIERESLKNEED 346 >gi|13384201|gb|AAK21311.1| myosin subfamily XI heavy chain [Petroselinum crispum] Length = 1515 Score = 44.4 bits (104), Expect = 0.006 Identities = 39/193 (20%), Positives = 70/193 (36%), Gaps = 33/193 (17%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFR------GSEDARGKKLFWKADELI------E 272 ++ W + KEL + + G+ A KL + +EL + Sbjct: 853 LRKAVLTTQCAWRGKVARKEL----RALKMAAKETGALQAAKNKLEKQVEELTWRLQLEK 908 Query: 273 KLKSKLIDPLDACNFILMF-FQECDSDSPSLENGEGGFLIAPQ----DACNEIAEVVQDT 327 ++++ L + N L Q+ L+ E L+ + E A V+Q+ Sbjct: 909 RMRADLEEAKTQENSKLQSALQDVQ-----LQFKEAKDLLLKEREAAKKLAEQAPVIQEV 963 Query: 328 A----RKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESI 383 M+ +A E + K S L+ E E K + L ER K+ + E + Sbjct: 964 PVIDHGLMDKLAAENEK-LKILVSSLEVKIGETEKKYEETSKLSAERLKQALEAES--KL 1020 Query: 384 VRLKQAEADMFQL 396 V+LK A + + Sbjct: 1021 VQLKTAMHRLEEK 1033 >gi|73964056|ref|XP_868604.1| PREDICTED: similar to Cdc42 binding protein kinase beta isoform 2 [Canis familiaris] Length = 1646 Score = 44.4 bits (104), Expect = 0.007 Identities = 47/214 (21%), Positives = 79/214 (36%), Gaps = 38/214 (17%) Query: 225 VKDVFQHCAPNWDFEALIKE-LDFVRKI---------FRGSEDARGKKLF----WKADEL 270 +++ Q A L +E L+ RK+ GS A G K +E Sbjct: 434 LENSLQVEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSTRALGSSARDKEIKKLNEE 493 Query: 271 IEKLKSKLIDP---LDACNFILMFFQECDSDSPSLENGEGG-FLIAPQDA-----CNEIA 321 IE+LK+K+ D + QE + + L+ E ++ + E + Sbjct: 494 IERLKNKIADSNRLERQLEDTVTLRQEHEDSTHRLKGLEKQYRVVRQEKEVFHKQLVEAS 553 Query: 322 EVVQDTARKMEVV-----------AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER 370 E ++ AR+++ +E RM + RS R+L DK V + Sbjct: 554 ERLKSQARELKDAHQQRKLALQEFSELNERMA-ELRSQKQKVSRQLRDKEEEVEVAMQKI 612 Query: 371 QKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 + +I + E K+ EA + A EA RE Sbjct: 613 DSMRQEIRKSEKF--RKELEARLEDAVA-EASRE 643 Score = 37.5 bits (86), Expect = 0.73 Identities = 47/265 (17%), Positives = 89/265 (33%), Gaps = 24/265 (9%) Query: 222 FGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 +++ + + L E + VR+ S K + + + Sbjct: 688 LEHQQEISKIKSELEKK-VLFYEEELVRR--EASHVLEVKNVKKEVHD-------SESHQ 737 Query: 282 LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRM 341 L +LM ++ S + E + E + + + + E R+ Sbjct: 738 LALQKEVLM-LKDKLEKSKRERHTEMEEAVGTVREKYERERGM--LLEENKKLTAENERL 794 Query: 342 FKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA 401 L A +R+LED+ + K + QI E+ V ++ Q A + Sbjct: 795 CS-FVDKLTAQNRQLEDELQDLAAKKESVAHWEAQIAEIIQWVSDEKDARGYLQALASKM 853 Query: 402 RREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS---------EAEER-RQYLFEELKAQEN 451 E E + KL +S EAE R +Q + EEL+ ++ Sbjct: 854 TEELETLRSSSLGSRALDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVQEELRKVKD 913 Query: 452 SQCDFDPMKMRMESEIRGLLKGMEM 476 + F+ E++ R LL+ ME+ Sbjct: 914 TNLSFESKLKDSEAKNRELLEEMEI 938 >gi|38636442|emb|CAE81978.1| related to vesicular transport protein [Neurospora crassa] Length = 1150 Score = 44.4 bits (104), Expect = 0.007 Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 6/157 (3%) Query: 252 FRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQE--CDSDSPSLENGEGGF 309 + S+ + L + +L +L + D C + E + E Sbjct: 859 LKSSQYTSAQNLLGSMRDQTAELSIQLKEAQDQCESLDEELAETRKMLSERTREAETMRR 918 Query: 310 LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME 369 L+ QD V+D KME EE+ R+ ++ ++ RE E+ V DL+ E Sbjct: 919 LL--QDVDERADSKVRDMRAKMEAAVEERDRIEEETSALARRKSRETEELKQKVRDLERE 976 Query: 370 RQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE 406 + + +ELE R K+ + +L++ E R AE Sbjct: 977 VKSLASEKDELEH--REKEWKKRRDELESVEERSNAE 1011 >gi|37675370|ref|NP_032813.2| pericentrin 2 [Mus musculus] Length = 2916 Score = 44.4 bits (104), Expect = 0.007 Identities = 41/219 (18%), Positives = 76/219 (34%), Gaps = 14/219 (6%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 L + + + +L+ L +L Q+C+ + ++ +A + E Sbjct: 140 ANLQKEKETALTELREMLNGRRAQELALLQSRQQCELELLREQHAREKEEMA-LRSGQEA 198 Query: 321 AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEEL 380 AE+ + +ME A+ + + S + C L + +ME + + Q E Sbjct: 199 AELKEKLRSEMEKNAQTIETLKQDWESERELCLENLRQELSLKHQSEMEGLQSQFQKELS 258 Query: 381 ESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ 440 E V L +FQ A+ EAE ++ Q Sbjct: 259 EQKVEL----EKIFQ-----AKHEAEVSLKNLEAQHQAAIKKLQEDLQSEHCQYLQDLEQ 309 Query: 441 YLFEELKA----QENSQCDFDPMKMRMESEIRGLLKGME 475 E+ KA E Q ++ +K + + EIR L +E Sbjct: 310 KFREKEKAKELELETLQASYEDLKAQSQEEIRLLWSQLE 348 >gi|7294443|gb|AAF49788.1| CG9206-PA [Drosophila melanogaster] Length = 1265 Score = 44.4 bits (104), Expect = 0.007 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 24/117 (20%) Query: 298 DSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE 357 DSP L E L + + R ++ A +K + +ELE Sbjct: 374 DSPGLSTYEFKQLEQQN------IRLKETLVRLRDLSAHDKH--------DIQKLSKELE 419 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQ--------AEADMFQLKADEARREAE 406 K VT+L+ ++K +I+ELE+IV Q AE + QL E + E E Sbjct: 420 MKRSEVTELERTKEKLSAKIDELEAIVADLQEQVDAALGAEEMVEQLA--EKKMELE 474 >gi|3327124|dbj|BAA31630.1| KIAA0655 protein [Homo sapiens] Length = 1083 Score = 44.4 bits (104), Expect = 0.007 Identities = 39/200 (19%), Positives = 67/200 (33%), Gaps = 16/200 (8%) Query: 256 EDARGKKLFWKAD---ELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIA 312 E R + L +A+ E +KL + + ++D+ L Sbjct: 440 EGERSQGLREEAERKASATEARYNKLKEKHSELVHVHAELLRKNADT-------AKQLTV 492 Query: 313 PQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQK 372 Q + E+A V + A ++E V E ++ L+ RELE KA + + Sbjct: 493 TQQSQEEVARVKEQLAFQVEQVKRESELKLEEKSDQLEKLKRELEAKAGELARAQEALSH 552 Query: 373 KKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL 432 + EL S + AE D A R+ E + + R Sbjct: 553 TEQSKSELSSRLDTLSAEKDALSG----AVRQREADLLAAQSLVRETEAALSR--EQQRS 606 Query: 433 SEAEERRQYLFEELKAQENS 452 S+ + Q E ++QE Sbjct: 607 SQEQGELQGRLAERESQEQG 626 >gi|55742224|ref|NP_001006915.1| myosin, heavy polypeptide 2, skeletal muscle, adult [Xenopus tropicalis] Length = 1935 Score = 44.4 bits (104), Expect = 0.007 Identities = 44/199 (22%), Positives = 75/199 (37%), Gaps = 30/199 (15%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 G +KDV H + E L ++L V + R + + +E+ L+ Sbjct: 1648 GLLKDVQIHLDDSLRAQEDLKEQLAMVER--------RANLMQAEIEEMRAALEQTERSR 1699 Query: 282 LDACNFIL---MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME----VV 334 A +L Q S + SL N + E+ E +Q+ E + Sbjct: 1700 KVAEQELLDASERVQLLHSQNTSLINTKKKMETDITQLQTEVEEAIQEARNAEEKAKKAI 1759 Query: 335 AEEKMR--MFKKARSV----------LDACDRELEDKACAVTDLKMERQKKKPQIEELES 382 + M KK + LD ++L+ + L M+ KK QI++LE+ Sbjct: 1760 TDAAMMAEELKKEQDTSAHLERMKKNLDQTVKDLQHRLDEAEQLAMKGGKK--QIQKLEA 1817 Query: 383 IVRLKQAEADMFQLKADEA 401 VR + E D+ Q ++ EA Sbjct: 1818 RVRELENEVDVEQKRSTEA 1836 >gi|27529913|dbj|BAA96036.2| KIAA1512 protein [Homo sapiens] Length = 2010 Score = 44.4 bits (104), Expect = 0.008 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 17/160 (10%) Query: 259 RGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDS----------DSPSLENGEGG 308 R L + +EL L+ A +L + + LE Sbjct: 1753 RASLLAAELEELRAALEQGERSRRLAEQELLEATERLNLLHSQNTGLLNQKKKLEADLAQ 1812 Query: 309 FLIAPQDACNEIAEVVQDTARKMEVVA--EEKMRMFKKARSVLDACDRELEDKACAV-TD 365 ++A E E + + + A E+++ + + L+ + LE + Sbjct: 1813 LSGEVEEAAQERREAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKTLEQTVRELQAR 1872 Query: 366 LKMERQKK----KPQIEELESIVRLKQAEADMFQLKADEA 401 L+ Q K Q+++LE+ VR +AE D Q K EA Sbjct: 1873 LEEAEQAALRGGKKQVQKLEAKVRELEAELDAEQKKHAEA 1912 >gi|62646127|ref|XP_230774.3| PREDICTED: similar to myosin, heavy polypeptide 7B, cardiac muscle, beta [Rattus norvegicus] Length = 2020 Score = 44.0 bits (103), Expect = 0.008 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 17/160 (10%) Query: 259 RGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDS----------DSPSLENGEGG 308 R L + +EL L+ A +L + + LE Sbjct: 1763 RAALLASELEELRAALEQGERSRRLAEQELLEATERLNLLHSQNTGLLNQKKKLEVDLAQ 1822 Query: 309 FLIAPQDACNEIAEVVQDTARKMEVVA--EEKMRMFKKARSVLDACDRELEDKACAV-TD 365 ++A E E + + + A E+++ + + L+ + LE + Sbjct: 1823 LSGEVEEAAQERREAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKTLEQTVRELQAR 1882 Query: 366 LKMERQKK----KPQIEELESIVRLKQAEADMFQLKADEA 401 L+ Q K Q+++LE+ VR +AE D Q K EA Sbjct: 1883 LEEAEQAALRGGKKQVQKLEAKVRELEAELDAEQKKHAEA 1922 >gi|63622214|ref|XP_618893.1| PREDICTED: similar to myosin, heavy polypeptide 13, skeletal muscle [Mus musculus] Length = 2482 Score = 44.0 bits (103), Expect = 0.008 Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 41/198 (20%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADE--------------- 269 +K+ L +EL+ ++ +E R D Sbjct: 1707 LKEQLAIV--ERRNGLLQEELEEMKVALEQTERTRRLSEQELLDSSDRVQLLHSQNTSLI 1764 Query: 270 -LIEKLKSKL-IDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 +KL++ L + N I + + A + A + ++ Sbjct: 1765 NTKKKLEADLAQCQAEVENSIQESRNAEEK---------------AKKAITDAAMMAEEL 1809 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ + A RM K L+ ++L+ + L ++ KK QI++LE+ VR Sbjct: 1810 KKEQDTSAHL-ERMKKN----LEQTVKDLQHRLDEAEQLALKGGKK--QIQKLEARVREL 1862 Query: 388 QAEADMFQLKADEARREA 405 ++E D Q + EA + A Sbjct: 1863 ESELDAEQKRGAEALKGA 1880 >gi|62414084|ref|NP_001014816.1| kinesin family member 7 [Danio rerio] Length = 1363 Score = 44.0 bits (103), Expect = 0.008 Identities = 33/179 (18%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 237 DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIE------KLKSKLIDPLDACNFILM 290 E+L +EL + R +++ + L + K + +L D L N + Sbjct: 988 RIESLERELTERNGLLRSGSAQDSQQIRQEISNLRQEKELLLKQRVELDDKLRQGNLL-- 1045 Query: 291 FFQECDSDSPSLENGEG-GFLIAPQDACNE-IAEVVQDTARKMEVVAEEKMRMFKK---- 344 + + + E L A + NE I + + ++ + +M + K Sbjct: 1046 ---SPEEERTLFQLDEAIEALDAAIEYKNEAITQRQRQLRASGSMLTQWEMNLMAKLTYL 1102 Query: 345 ARSVLDACDRELEDK----ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD 399 + S A + DK L+M + + ++EE +++V +A + QL+AD Sbjct: 1103 SASETRALLCKYFDKVVSLREEERRLQMALAELELRVEEQQNLVGWLEAALERQQLEAD 1161 >gi|57228143|gb|AAW44600.1| transcriptional activator, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 571 Score = 44.0 bits (103), Expect = 0.008 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 12/62 (19%) Query: 158 VICSKFDFASNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACN 216 IC + D + +GC+ C W H C + E ++++ + ++ C +C Sbjct: 281 CICRRPDTDDDDGLMVGCESCDGWFHASCVGLDEEMVEL----------LD-VYICKSCE 329 Query: 217 HT 218 T Sbjct: 330 RT 331 >gi|50757613|ref|XP_415578.1| PREDICTED: similar to myosin heavy chain [Gallus gallus] Length = 3503 Score = 44.0 bits (103), Expect = 0.009 Identities = 47/266 (17%), Positives = 91/266 (34%), Gaps = 57/266 (21%) Query: 236 WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL-------KSKLIDPLDACNFI 288 E L +++ V + R L + +EL L K + LDA + Sbjct: 1613 RSQEDLKEQVAMVER--------RANLLQAEIEELRAALEQTERSRKVAEQELLDASERV 1664 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMR--MFKKAR 346 + + S + + E + + I E + + + + M KK + Sbjct: 1665 QLLHTQNTSLINTKKKLESDISQIQSEMEDTIQEARNAEEKAKKAITDAAMMAEELKKEQ 1724 Query: 347 SV----------LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL 396 LD ++L+ + L ++ KK QI++LE+ VR + E D Q Sbjct: 1725 DTSAHLERMKKNLDQTVKDLQHRLDEAEQLALKGGKK--QIQKLEARVRELEGEVDAEQK 1782 Query: 397 KADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDF 456 ++ EA + Y + +L E+R+ L Q Sbjct: 1783 RSAEAVK---------------GVRKYERRVKELTYQSEEDRKNVL--------RLQDLV 1819 Query: 457 DPMKMRMES-----EIRGLLKGMEMT 477 D ++M+++S E L + ++ Sbjct: 1820 DKLQMKVKSYKRQAEEAEELSNVNLS 1845 >gi|61835730|ref|XP_590008.1| PREDICTED: similar to guanylate binding protein 1 [Bos taurus] Length = 640 Score = 44.0 bits (103), Expect = 0.009 Identities = 53/265 (20%), Positives = 85/265 (32%), Gaps = 20/265 (7%) Query: 226 KDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDAC 285 KD+ Q + K DF + + SED L L E + + Sbjct: 372 KDIDQLFQKELAAQLDKKRDDFCNQNLKASEDHCSALLKDIFSPLEEDMXQGIYLKPGGS 431 Query: 286 NFILMFFQECDSDSPSLENGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKK 344 Q+ + SP E FL + + E + A+ R Sbjct: 432 PHKGPQHQQLQNQSPQFTRTENHFLHVYQPLKKDSAQEGT--LLGQSGACAQPSDRES-D 488 Query: 345 ARSVLDACDRELEDKACA-----------VTDLKMERQKKKPQIEELESIVRLKQAEADM 393 ++ ++ LE KA VTD ++ + + E+L + R+K A Sbjct: 489 HQAHQGQEEQFLEGKAEEILQEYLKSKESVTDAILQTDQTLSEKEKLIEVERVKAESAQA 548 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENS- 452 +E + + + T K + R EE+ + L LK QE S Sbjct: 549 AAKMLEEMQIKNQQMMEQKEKSYQEHVKQLTEKMERDRALLLEEQERTL--ALKLQEQSL 606 Query: 453 --QCDFDPMKMRMESEIRGLLKGME 475 Q F R+ EI+ L K M Sbjct: 607 KIQEGFQEENRRLHKEIQSLQKKMN 631 >gi|42761572|gb|AAS45390.1| similar to Babesia bigemina. 200 kDa antigen p200 (Fragment) [Dictyostelium discoideum] Length = 1508 Score = 44.0 bits (103), Expect = 0.009 Identities = 36/225 (16%), Positives = 83/225 (36%), Gaps = 25/225 (11%) Query: 234 PNWDFEALIKELDFVRKIFRGSEDARG-------KKLFWKADELIEKLKSKLIDPLDACN 286 + L K+ ++ + +D + +++ + E ++L+ ++ A Sbjct: 679 EKEKQDQLEKQRKLEQQRLQKEKDEKELADRLEKERIENEIKEKQKQLEKIKLEKELAEK 738 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR 346 Q ++D + + + E+AE ++ + E AEEK R Sbjct: 739 KEKERLQ-KEADEKRIADQLEFERLLKLKQEKELAEKLEKERLEKEAAAEEK-------R 790 Query: 347 SVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE 406 + +++ +K + + ++K+ + E E + + E + +A+E R AE Sbjct: 791 IAAEKLEKQRLEKEAEEKRIAQDLERKRLEKEAEEKRIA-QDLERKRLEKEAEEKRIAAE 849 Query: 407 XXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQEN 451 +K K RL + E ++ E+ A+EN Sbjct: 850 KLKQQQEL---------AAKLEKERLEKEAEEKRIAQEKRIAEEN 885 Score = 40.2 bits (93), Expect = 0.13 Identities = 44/242 (18%), Positives = 88/242 (36%), Gaps = 48/242 (19%) Query: 261 KKLFWKADELIEKLKSKLID----PLDACNFILMFFQECDSDSP----SLENGEGGFLIA 312 K+L K + E+++ +L D +L QE + LE IA Sbjct: 613 KQLAEKLE--KERIEKELEDLRLAKELEEKRLLALRQEKELAEKLKRERLEKEAEDKRIA 670 Query: 313 PQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL-----EDKACAV---- 363 + + + QD K + +++++ K + + D ++E ++K + Sbjct: 671 QEIERKRLEKEKQDQLEKQRKLEQQRLQKEKDEKELADRLEKERIENEIKEKQKQLEKIK 730 Query: 364 -----------TDLKMERQKKK-PQIEELESIVRLKQAEADMFQLKADEARREAEXXXXX 411 L+ E +K+ E E +++LKQ + +L+ + +EA Sbjct: 731 LEKELAEKKEKERLQKEADEKRIADQLEFERLLKLKQEKELAEKLEKERLEKEAAAEEKR 790 Query: 412 XXXXXXXXXXXYTSKYLKLRLS-EAEERR------QYLFEELKAQENSQCDFDPMKMRME 464 K K RL EAEE+R + E+ ++ D + ++ E Sbjct: 791 IA----------AEKLEKQRLEKEAEEKRIAQDLERKRLEKEAEEKRIAQDLERKRLEKE 840 Query: 465 SE 466 +E Sbjct: 841 AE 842 >gi|34532311|dbj|BAC86384.1| unnamed protein product [Homo sapiens] Length = 842 Score = 44.0 bits (103), Expect = 0.009 Identities = 37/212 (17%), Positives = 75/212 (35%), Gaps = 29/212 (13%) Query: 244 ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFIL------MFFQECDS 297 L ++R + S A ++ + + ++KL+ +L A L M Q + Sbjct: 551 RLSWLRAQVQSSTQADEDQIRAEQEASLQKLREELESQQKAERASLEQKNRQMLEQLKEE 610 Query: 298 DSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE 357 S ++ + A + A ++ E ++ ++ E K+ + L+ LE Sbjct: 611 IEASEKSEQAALNAAKEKALQQLREQLEGERKEAVATLE------KEHSAELERLCSSLE 664 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXX 417 K V ++ ++ Q EE + L Q E + Q A E E Sbjct: 665 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHEL---------- 714 Query: 418 XXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ 449 S L+ + E E + +++K + Sbjct: 715 -------SSLLREKRQEVEGEHERRLDKMKEE 739 >gi|73964058|ref|XP_868606.1| PREDICTED: similar to Cdc42 binding protein kinase beta isoform 3 [Canis familiaris] Length = 1551 Score = 43.6 bits (102), Expect = 0.010 Identities = 47/214 (21%), Positives = 79/214 (36%), Gaps = 38/214 (17%) Query: 225 VKDVFQHCAPNWDFEALIKE-LDFVRKI---------FRGSEDARGKKLF----WKADEL 270 +++ Q A L +E L+ RK+ GS A G K +E Sbjct: 434 LENSLQVEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSTRALGSSARDKEIKKLNEE 493 Query: 271 IEKLKSKLIDP---LDACNFILMFFQECDSDSPSLENGEGG-FLIAPQDA-----CNEIA 321 IE+LK+K+ D + QE + + L+ E ++ + E + Sbjct: 494 IERLKNKIADSNRLERQLEDTVTLRQEHEDSTHRLKGLEKQYRVVRQEKEVFHKQLVEAS 553 Query: 322 EVVQDTARKMEVV-----------AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER 370 E ++ AR+++ +E RM + RS R+L DK V + Sbjct: 554 ERLKSQARELKDAHQQRKLALQEFSELNERMA-ELRSQKQKVSRQLRDKEEEVEVAMQKI 612 Query: 371 QKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 + +I + E K+ EA + A EA RE Sbjct: 613 DSMRQEIRKSEKF--RKELEARLEDAVA-EASRE 643 >gi|72010599|ref|XP_784200.1| PREDICTED: similar to nuclear oncoprotein skia [Strongylocentrotus purpuratus] Length = 207 Score = 43.6 bits (102), Expect = 0.011 Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 23/183 (12%) Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQE--CDSD 298 + +E++ V+K+ S+ + K + +++S + L FQ+ D Sbjct: 1 MEQEIEMVKKMLLESDALDTRAGREKLLHELARIRSSQEERLQGALAAKRNFQQNRRDLL 60 Query: 299 SPSLEN--------------GEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFK 343 + ++ N E FL + +D E E + ++++ V E R + Sbjct: 61 NIAITNCSVNLSCCVLDRSLQEMEFLRLTKKDKIREAMESKRSLRKELDRVRIEYERKLR 120 Query: 344 KARSVLDACDRELEDKACAVTDLKMER----QKKKPQIEELESIVRLKQAEADMFQLKAD 399 ++ R+LE ++ E ++ Q E L+ VR E + QL+ D Sbjct: 121 ESNESRQRLKRDLELARSRRSEKSNEIGRDNERLGSQNEYLKDRVR--DLEEERDQLRRD 178 Query: 400 EAR 402 R Sbjct: 179 LQR 181 >gi|56550527|dbj|BAD77934.1| AousoA [Aspergillus oryzae] Length = 1216 Score = 43.6 bits (102), Expect = 0.012 Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 37/226 (16%) Query: 253 RGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIA 312 R S + + L + +++ + K L + N E + LE A Sbjct: 979 RKSAKSEAEGLRKELEKVRSEAKKAEEAALKSAN------SEIEGLRKELEQVRSEAKNA 1032 Query: 313 PQDACNEIAEVVQDTARKMEVV------AEEKMRMFKKA-RSVLDACDRELEDKACAVTD 365 A +++E V E+ R K+ +S + +ELE V + Sbjct: 1033 EDAARKSAQSEADKLRKELEKVKSEAKRTEDATRKSSKSTKSEAEGLRKELEKAKLEVKE 1092 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 + R+ + +I EL+ + + EA +A+EAR+ E Sbjct: 1093 KEAARKSTQTEITELQRELEKVKLEAK---DQAEEARKAKE-----------------NE 1132 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLL 471 + E +E R+ EL+ ++ + + + +SE+ LL Sbjct: 1133 SVAQKSTQEIDELRK----ELEKLKSEVKEKEEARKSAQSELEDLL 1174 Score = 41.7 bits (97), Expect = 0.046 Identities = 33/182 (18%), Positives = 75/182 (41%), Gaps = 16/182 (8%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD 298 E L KEL+ VR + +EDA K +AD+L ++L+ + + + S+ Sbjct: 1016 EGLRKELEQVRSEAKNAEDAARKSAQSEADKLRKELEKVKSEAKRTEDATRKSSKSTKSE 1075 Query: 299 SPSLENGEGGFLIAPQDACN-------EIAEVVQDTAR---------KMEVVAEEKMRMF 342 + L + ++ EI E+ ++ + + A+E + Sbjct: 1076 AEGLRKELEKAKLEVKEKEAARKSTQTEITELQRELEKVKLEAKDQAEEARKAKENESVA 1135 Query: 343 KKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR 402 +K+ +D +ELE V + + R+ + ++E+L + +A+ + + + + Sbjct: 1136 QKSTQEIDELRKELEKLKSEVKEKEEARKSAQSELEDLLIVFGDLEAKRNEDKKRLKDLG 1195 Query: 403 RE 404 +E Sbjct: 1196 QE 1197 >gi|50753023|ref|XP_413836.1| PREDICTED: similar to homer-2b [Gallus gallus] Length = 639 Score = 43.6 bits (102), Expect = 0.012 Identities = 32/159 (20%), Positives = 55/159 (34%), Gaps = 30/159 (18%) Query: 222 FGFVKDVFQHCAPNWDF-----EALIKELDFVRKIFRGSEDARGKKL---FWKADELIEK 273 K F C D E L ++ + + K E R +L + + ++ Sbjct: 493 IEHWKKQFSACKEENDQLRSKIEELEEQCNEINK-----EKERNAQLSRRLQELETELQD 547 Query: 274 LKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + +L + I EC+S S L++ E + ++ E V+ ++E Sbjct: 548 KELELEELRKQGEVIPQLMSECESVSQQLQDAE--------NKNKDLEEKVRTLRTEVE- 598 Query: 334 VAEEKMR------MFKKARSVLDACDRELEDKACAVTDL 366 E K R K VLD EL D ++ L Sbjct: 599 --ESKHRQTNLKTELKNFLDVLDGKIDELHDFRQGLSKL 635 >SMC_N_Q67MD3_4-1192_PF02463.7 Length = 1189 Score = 43.6 bits (102), Expect = 0.013 Identities = 35/193 (18%), Positives = 71/193 (36%), Gaps = 22/193 (11%) Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACN----FILMFFQECDSDSPSLENGEGG----- 308 R +L + +E + ++ + + A ++ E + + +L E G Sbjct: 348 QRAVELEDRLEEARRQA-GEVEEQVAALREKHDAVVRQIGEAEKRAAALRARETGLQEEI 406 Query: 309 -FLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 L + N I + + R E R +A + ++ELE A + Sbjct: 407 ARLEVSPEERNRITDAQRALDRLREA-----ERALLQAEQRVRQREQELEHARRAAEQAE 461 Query: 368 MERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY 427 R + + +++E+ES ++ + E ADEA A+ ++Y Sbjct: 462 ALRLEAERRLQEVESALQRLETEP-----PADEADLRAQEAWLGRAGEQIRTVAGLAAQY 516 Query: 428 LKLRLSEAEERRQ 440 R +EA+ RR+ Sbjct: 517 A-QRQAEADARRR 528 >gi|51893313|ref|YP_076004.1| DNA repair exonuclease [Symbiobacterium thermophilum IAM 14863] Length = 1200 Score = 43.6 bits (102), Expect = 0.013 Identities = 35/193 (18%), Positives = 71/193 (36%), Gaps = 22/193 (11%) Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACN----FILMFFQECDSDSPSLENGEGG----- 308 R +L + +E + ++ + + A ++ E + + +L E G Sbjct: 351 QRAVELEDRLEEARRQA-GEVEEQVAALREKHDAVVRQIGEAEKRAAALRARETGLQEEI 409 Query: 309 -FLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 L + N I + + R E R +A + ++ELE A + Sbjct: 410 ARLEVSPEERNRITDAQRALDRLREA-----ERALLQAEQRVRQREQELEHARRAAEQAE 464 Query: 368 MERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY 427 R + + +++E+ES ++ + E ADEA A+ ++Y Sbjct: 465 ALRLEAERRLQEVESALQRLETEP-----PADEADLRAQEAWLGRAGEQIRTVAGLAAQY 519 Query: 428 LKLRLSEAEERRQ 440 R +EA+ RR+ Sbjct: 520 A-QRQAEADARRR 531 >gi|32408715|ref|XP_324838.1| hypothetical protein [Neurospora crassa] Length = 4007 Score = 43.3 bits (101), Expect = 0.013 Identities = 46/234 (19%), Positives = 89/234 (38%), Gaps = 26/234 (11%) Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFL 310 I R +R +L + + EK K L + L N + L N + Sbjct: 1160 ILRKQHQSRVGELESEIATIKEKYKKDLDE-LSRNNTSQDAIK-LKQHENELANFKAK-- 1215 Query: 311 IAPQDACNEIAEVVQDTARKMEVVAE---EKMRMFKKARSVLDACDRELEDKACAVTDLK 367 + + +ME + + EK ++ + + + A EL DK A+ + K Sbjct: 1216 YEQEKKQLAVQH-----KTEMESLTDRYHEKEKLATQYQERVQALSAELADKKTALAEYK 1270 Query: 368 MERQKKKPQIEELESI--VRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 + K Q+++L++ V++ + +A LK++ A+ A+ Sbjct: 1271 EQLSASKAQLDKLKADHGVKVDELQAK---LKSEVAKVTADYEGNLSELRTKHQGEVNVL 1327 Query: 426 K------YLKLRLSEAEERR--QYLFEELKAQ-ENSQCDFDPMKMRMESEIRGL 470 K KL E+ R ++ +LKA+ + + +FD K +E E+ L Sbjct: 1328 KVHHQDEIKKLTAGHNEKIRNLEHRINDLKAELKQDRAEFDKKKALLEGEVATL 1381 >AAA_Q5YNI7_201-396_PF00004.17 Length = 196 Score = 43.3 bits (101), Expect = 0.014 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ G ++ E+ V+ T + A R Sbjct: 133 RFQQVLVGEPSVEDTVG--ILRGIKERYEVHHGVRITDSALVAAAALSDRYI-------- 182 Query: 351 ACDRELEDKA 360 R L DKA Sbjct: 183 -TSRFLPDKA 191 >gi|50256955|gb|EAL19673.1| hypothetical protein CNBG3010 [Cryptococcus neoformans var. neoformans B-3501A] Length = 588 Score = 43.3 bits (101), Expect = 0.014 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 12/62 (19%) Query: 158 VICSKFDFASNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACN 216 IC + D + +GC+ C W H C + E ++++ + ++ C +C Sbjct: 282 CICRRPDTDDDDGLMVGCESCDGWFHASCVGLDEEMVEL----------LD-VYICKSCE 330 Query: 217 HT 218 T Sbjct: 331 RT 332 >PHD_Q6PHU4_634-693_PF00628.16 Length = 60 Score = 43.3 bits (101), Expect = 0.015 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 7/63 (11%) Query: 156 MCVICSK-FDFASNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCI 213 C IC++ ++ + + C C HW H C + + ++ +L+ C Sbjct: 1 YCPICTRCYEDNDYESKMMQCAQCDHWVHAKCEGLSDEDYEILSGL-----PDSVLYTCG 55 Query: 214 ACN 216 C Sbjct: 56 PCA 58 >gi|73955070|ref|XP_536554.2| PREDICTED: similar to myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila) [Canis familiaris] Length = 3923 Score = 43.3 bits (101), Expect = 0.015 Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 34/137 (24%) Query: 125 RCRNIACQNLLPADDCD---------CDICSNKKGFCNLCMCVICSKFDFASNT-CRWIG 174 RC+ +C + P D C C+ F C +C K + + + Sbjct: 1493 RCK--SCGSTTPGKGWDAQWSHDFSLCHDCAKL--FAKGNFCPLCDKCYDDDDYESKMMQ 1548 Query: 175 CDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 C C W H+ C + + + ++ + + + C+ C H A Sbjct: 1549 CGKCDRWVHSKCENLSDEMYEILSNL-----PESVAYTCVNCTER------------HPA 1591 Query: 234 PNWDFEALIKELDFVRK 250 W AL KEL K Sbjct: 1592 E-WRL-ALEKELQLSLK 1606 >gi|1403575|emb|CAA59349.1| multiple ligand-binding protein 1 [Streptococcus sp.] Length = 439 Score = 43.3 bits (101), Expect = 0.015 Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 17/172 (9%) Query: 219 SELFGFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSK 277 + L G KD + + LD K+ S R + A + + +++ Sbjct: 180 NNLLGNAKDQLDKLTTEKESLSKDKEALDERNKVLEAS-RTRTNRDLEAARDAKKATEAE 238 Query: 278 LIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ-DTARK------ 330 L + + + + +A + + + + A+ Sbjct: 239 LAETNAKV--------DKLEEEKQVLEASRKRTNRDLEAARDAKKATEAELAKANELNQI 290 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELES 382 +E R + AR A D EL LK + K+ +IE+L+ Sbjct: 291 LEASRTRTNRDLEAARDAKKAVDAELAKLKAEAEALKEQLAKQAQEIEKLKE 342 >gi|42548995|gb|EAA71838.1| hypothetical protein FG02793.1 [Gibberella zeae PH-1] Length = 1139 Score = 43.3 bits (101), Expect = 0.016 Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 9/144 (6%) Query: 317 CNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQ 376 V+D +ME EE+ R+ ++ ++ RE ED + DL+ E + + Sbjct: 919 DERADNKVRDMRARMEAAVEERDRIEDESATLARRKTRETEDLKQKLKDLEREVKTLTHE 978 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSK----YLKLRL 432 +ELE R K+ +L++ E + EAE + K K R Sbjct: 979 RDELEQ--REKEWRKRREELESVEEKAEAETDELRTTASQLRTALDASEKQVRDVEKQRA 1036 Query: 433 SEAE--ERRQYLFEEL-KAQENSQ 453 E + +E+L K + +Q Sbjct: 1037 ELRRMLEESRQRYEKLSKDLKAAQ 1060 >gi|62649539|ref|XP_342897.2| PREDICTED: similar to hypothetical protein FLJ32000 [Rattus norvegicus] Length = 1598 Score = 43.3 bits (101), Expect = 0.017 Identities = 50/283 (17%), Positives = 100/283 (35%), Gaps = 29/283 (10%) Query: 215 CNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL 274 CN+ L + K E K+L R +++ + + L + KL Sbjct: 1107 CNNQKLLLEYEKYQELQLKSQRMQEEYEKQL-------RDNDETKSQALEELTEFYEAKL 1159 Query: 275 KSK---LIDPLDACN------------FILMFFQECDSDSPSLENGEGGFLIAPQDACNE 319 + K L + L F + + D E E I +D E Sbjct: 1160 QEKTGLLEEALSTAASPPLPSAHVLSPFPTLSQAQEDVRQQLREFEETKKQIE-EDEDRE 1218 Query: 320 IAEVVQDTARKMEVVAEEKMRMFKKARSVLDACD---RELEDKACAVTDLKMERQKKKPQ 376 I ++ RK+ E +R+ + + +E+E++ + LK E+ K + Sbjct: 1219 IQDIKTKYERKLRDEKESNLRLKGETGIMRKKFSSLQKEIEERTNDIELLKTEQVKLQGV 1278 Query: 377 IEELESIVR--LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE 434 I LE ++ ++ + ++ D+ +R + Y K LK ++ Sbjct: 1279 IRSLEKDIQGLKREIQERDETIQ-DKEKRIYDLKKKNQELEKFKFVLDYKIKELKKQIEP 1337 Query: 435 AEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 E + + E+++ E+ F ++E I LL+ + T Sbjct: 1338 RENEIKVMKEQIQEMEDELERFHKQNTQLELNITELLQKLRAT 1380 >gi|55643363|ref|XP_510794.1| PREDICTED: periplakin [Pan troglodytes] Length = 2662 Score = 42.9 bits (100), Expect = 0.017 Identities = 21/137 (15%), Positives = 47/137 (34%), Gaps = 11/137 (8%) Query: 256 EDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQD 315 E R + L + + L KL + L +L + + E + Sbjct: 2402 EQHRRQLLEGELETLRRKL-AALEKAEVKEKVVLSESVQVEKGDTEQEIQRLKSSLE--- 2457 Query: 316 ACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKP 375 E + ++ ++ + E ++ + S +EL+ L++ERQ + Sbjct: 2458 ---EESRSKRELDVEVSRL-EARLSELEFHNS---KSSKELDFLREENHKLQLERQNLQL 2510 Query: 376 QIEELESIVRLKQAEAD 392 + L+S + + E Sbjct: 2511 ETRRLQSEINMAATETR 2527 >gi|13272546|gb|AAK17202.1| major plasmodial myosin heavy chain [Physarum polycephalum] Length = 2148 Score = 42.9 bits (100), Expect = 0.018 Identities = 48/233 (20%), Positives = 84/233 (36%), Gaps = 46/233 (19%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQE------CDSDSPSLEN--------GE 306 KKL + ++L L+S+ I A +E S S E+ Sbjct: 1610 KKLENELEDLKASLESEQILRKKAELLAKPRGKEGATEIKPTVSSKSDEDFKKLTEELAV 1669 Query: 307 GGFLIAPQDACNEIAEVVQDTARKM----------EVVAEEKMRMFKKARSVLDACDREL 356 + + A AE + R EV A++K K+A V ++ Sbjct: 1670 LKTELDGEKAWRGNAEKRERALRAENDELRGQLEDEVTAKDKTNKAKRALEVEVEELKDQ 1729 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 D+ L+ + K+ + ELE + R + EA+ LK DE R++ E Sbjct: 1730 LDEVEE--SLQEAEEFKRRKDLELEEVKRKLEGEAE-LTLKMDELRKQFEKD-------- 1778 Query: 417 XXXXXXYTSKYLKLRLSEAEERR-QYLFEELKAQENSQCDFDPMKMRMESEIR 468 L++ EERR + E ++ + ++ D +K+ E + R Sbjct: 1779 ----------IENLKVELEEERRSRGEAERIRKRLEAENDDLNIKLDAEIKTR 1821 Score = 40.6 bits (94), Expect = 0.11 Identities = 37/229 (16%), Positives = 75/229 (32%), Gaps = 20/229 (8%) Query: 253 RGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDS---DSPSLENGEGGF 309 + + + L K +E I KLK L + + I + + D+ + E Sbjct: 1845 ESATKTQSENLAQKLEEEIAKLKEDLDNEVKQKALIERTRKSLELQLEDTRTQMEVEARQ 1904 Query: 310 LIAPQDACNEIAEVVQDTARKMEVVAE-------EKMRMFKKARSVLDACDRELEDKACA 362 + ++D +++ E +K R+ + RE E A Sbjct: 1905 RANADKLRRQAENELEDLREQVDAFDETEQDLLSDKTRLEVECEEARKNVLRESE--ARE 1962 Query: 363 VTDL-KMERQKKKPQIEEL--ESIVRLKQAEADMFQLKAD--EARREAEXXXXXXXXXXX 417 +L + Q++ ++ E E ++ E + AD +A+ + E Sbjct: 1963 AAELARTRIQRELAELREKYDEEVILRTNLERTRKKTDADYEDAKEQLELESKLRAKLER 2022 Query: 418 XXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESE 466 L L A+ L ++A E + D+ ++ R E Sbjct: 2023 EVKAAAAGTKL---LQTAKADADKLKARVQALEKMEADYKKLQARCTEE 2068 >PHD_Q6LEX8_1763-1819_PF00628.16 Length = 57 Score = 42.9 bits (100), Expect = 0.019 Identities = 10/32 (31%), Positives = 18/32 (56%) Query: 156 MCVICSKFDFASNTCRWIGCDVCSHWCHTDCA 187 C++C++ ++ +W+ CDVC W H C Sbjct: 1 FCIMCNEKYDEDDSKKWVQCDVCKFWIHLSCD 32 >gi|62653950|ref|XP_236194.3| PREDICTED: similar to All-1 protein +GTE form - mouse (fragment) [Rattus norvegicus] Length = 3739 Score = 42.9 bits (100), Expect = 0.020 Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 34/137 (24%) Query: 125 RCRNIACQNLLPADDCD---------CDICSNKKGFCNLCMCVICSKFDFASNT-CRWIG 174 RC+ +C + P D C C+ F C +C K + + + Sbjct: 1221 RCK--SCGSTTPGKGWDAQWSHDFSLCHDCAKL--FAKGNFCPLCDKCYDDDDYESKMMQ 1276 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 C C W H+ C + + + ++ + + + C+ C H A Sbjct: 1277 CGKCDRWVHSKCEGLSDEMYEILSNL-----PESVAYTCVNCTER------------HPA 1319 Query: 234 PNWDFEALIKELDFVRK 250 W AL KEL K Sbjct: 1320 E-WRL-ALEKELQASLK 1334 >gi|3986196|dbj|BAA34955.1| myosin heavy chain [Dugesia japonica] Length = 1743 Score = 42.9 bits (100), Expect = 0.020 Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 8/217 (3%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 KKL + +EL + ++S A Q+ + + ++ E + Q Sbjct: 732 KKLNGEIEELKKDVESLESSLQKAEQEKAAKDQQIKTLNDNVREKE-EQITKMQKEKKAA 790 Query: 321 AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK--ACAVTDLKMERQKKKPQIE 378 E+ + T + EEK+ KA++ L+ E+E+ +E+ K+K + E Sbjct: 791 DELQKKTEESLRAE-EEKVSNLNKAKAKLEQAVDEMEENLSREQKVRADVEKAKRKVEGE 849 Query: 379 ELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER 438 ++ L E +L+ R+E E + +K E + R Sbjct: 850 LKQNQEMLNDLERVKSELEEQLKRKEMELNGANSKIEDENNLVATLQRKIK----ELQAR 905 Query: 439 RQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 Q L E+L+A+ ++ + K ++E+EI + + +E Sbjct: 906 IQELEEDLEAERQARAKAEKAKHQLEAEIEEVTERLE 942 Score = 37.5 bits (86), Expect = 0.90 Identities = 43/224 (19%), Positives = 89/224 (39%), Gaps = 16/224 (7%) Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 A+ K+ F K+++ + L+ + + L A N + + Q E ++ D Sbjct: 648 AKLKEEFEKSEKYKKDLEEQNVTLLQAKNDLFLQLQTEQDSLADAEEKVSKLVLQKADME 707 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 I E ++D + E A KK ++ +++E ++ + E+ K QI Sbjct: 708 GRIKE-LEDQLSEEENSATTLEEAKKKLNGEIEELKKDVESLESSLQKAEQEKAAKDQQI 766 Query: 378 EELESIVRLKQAEADMFQLK---ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE 434 + L VR K+ + Q + ADE +++ E K +L + Sbjct: 767 KTLNDNVREKEEQITKMQKEKKAADELQKKTEESLRAEEEKVS------NLNKAKAKLEQ 820 Query: 435 AEERRQYLFEELKAQENSQCDFDPMKMRMESEI---RGLLKGME 475 A + + E L ++ + D + K ++E E+ + +L +E Sbjct: 821 AVDEME---ENLSREQKVRADVEKAKRKVEGELKQNQEMLNDLE 861 >gi|22770984|gb|AAN06818.1| ezrin [Oryctolagus cuniculus] Length = 586 Score = 42.9 bits (100), Expect = 0.020 Identities = 29/149 (19%), Positives = 62/149 (41%), Gaps = 6/149 (4%) Query: 257 DARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDA 316 AR +K + + ++L+S+ +E + L++ E A ++ Sbjct: 308 QAREEKHQKQLE--RQQLESEKKRREAVEQEKEQMLREKEELMMRLQDYEQKTKKAEKEL 365 Query: 317 CNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL---DACDRELEDKACAVTDLKMERQKK 373 ++I +Q + + EE R+ + L + +R+ D+ + L E + Sbjct: 366 SDQIQRALQ-LEDERKRAQEESERLEADRVAALRAKEELERQAADQIKSQEQLAAELAEY 424 Query: 374 KPQIEELESIVRLKQAEADMFQLKADEAR 402 +I LE R K++E + +Q +A EA+ Sbjct: 425 TAKIALLEEARRRKESEVEEWQHRAREAQ 453 >gi|74016976|ref|ZP_00687601.1| Methyltransferase FkbM [Burkholderia ambifaria AMMD] Length = 447 Score = 42.5 bits (99), Expect = 0.022 Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 25/193 (12%) Query: 223 GFVKDVFQHCAPN---WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKL- 278 D F + + L ++L RK + E G L E+L+ +L Sbjct: 220 PNWFDGFIRASESDMIRRAMDLEQQLIESRKQLQ--EAHEGWSLEK---GAREELEVRLN 274 Query: 279 -------IDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 + +S +N I A +E ++ R Sbjct: 275 SMTDRAHDEQASQVVLKDSSQDCVVQNSKISQNE-----IEQLKARVAASEGDLESHRAQ 329 Query: 332 EVVAEEKMRMFKKARSVL----DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ +K+ VL D +EL + + L ER + + +I+E V Sbjct: 330 LAELRTRLTESEKSAQVLSTERDTAYQELFESSRHAAWLSQERVRLQERIDESSRHVAWS 389 Query: 388 QAEADMFQLKADE 400 E Q K DE Sbjct: 390 NQERGRLQGKIDE 402 >gi|50554303|ref|XP_504560.1| hypothetical protein [Yarrowia lipolytica] Length = 704 Score = 42.5 bits (99), Expect = 0.024 Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 18/152 (11%) Query: 264 FWKADELIEKLKSKLIDPLDACNF-ILMFFQECDS-DSPSLENGEGGFLIAPQDAC---- 317 K EL K K +L A + + +F ++ + D E L + +A Sbjct: 85 EEKERELEAKHKKELDRAEQAESDQVFLFNKQKELSDENRTLKEELRSLQSQHEADGREL 144 Query: 318 -----------NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDL 366 N++ + +M E+ K A + D +E+E++ A+T+ Sbjct: 145 NHELEGLKDLLNDLQSENRALVSEMNYKIEDYEHRIKAASTTTDDLLKEVENRGTALTEA 204 Query: 367 KMERQKKKPQIEELE-SIVRLKQAEADMFQLK 397 KM K + +E L+ + LKQ+ D+ ++ Sbjct: 205 KMNVVKFEQLVESLKGESLDLKQSAKDLEAVE 236 >gi|50554163|ref|XP_504490.1| hypothetical protein [Yarrowia lipolytica] Length = 887 Score = 42.5 bits (99), Expect = 0.025 Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 23/179 (12%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D P++ ++ E+ V+ + A+ R Sbjct: 333 RFQKIDVREPTIRETVA--ILRGIQNKYELHHGVRILDSALVSAAQLASRYL-------- 382 Query: 351 ACDRELEDKACAVTD-----LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 R+L D A + D + + R + ++ LE + L M ++KA E + A Sbjct: 383 -TYRKLPDSAVDLVDEAAAAVAVARDSRPEHLDSLERELDLL-----MIEVKALERDQHA 436 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRME 464 + + LR E ER + EL ++ + + + E Sbjct: 437 DQGTKERLDAAKHRVADIEEELGPLR--ETFERERAGHVELNNLKHKVDELETKALDAE 493 >gi|21887052|gb|AAL56068.2| PP1221 [Homo sapiens] Length = 903 Score = 42.5 bits (99), Expect = 0.026 Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 30/217 (13%) Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFL 310 + R + +L E +E L + +E + + LE + Sbjct: 269 LTRSKQQETVTRLEQSLSEAMEALNREQESARLQQRERETLEEERQALTLRLEAEQQRCC 328 Query: 311 IAPQDACNEI------AEVVQDTARKMEVVAEE---KMRMFKKARSVLDACDRELEDKAC 361 + ++ ++ +E + + K+ L Sbjct: 329 VLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQ----------- 377 Query: 362 AVTDLKMERQKKKPQIE-----ELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 + ++ER+K+K Q E E + + L Q+E + + D ARRE + Sbjct: 378 EESQAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERD----ALQLEM 433 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEEL-KAQENS 452 Y S+ ++L A + Q + E L +AQE+S Sbjct: 434 SLVQARYESQRIQLESELAVQLEQRVTERLAQAQESS 470 >gi|50737091|ref|XP_419151.1| PREDICTED: similar to corneal epithelial Rho-associated-ser/thr kinase; ROCK-I [Gallus gallus] Length = 1968 Score = 42.5 bits (99), Expect = 0.026 Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 20/209 (9%) Query: 269 ELIEKLKSKLIDPLDACNFILMFFQECD-SDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 E+ +K+K + A N I+ ++C D ++ + + Q E + V++ Sbjct: 1327 EMEKKVKEERAAREKAENRIVQAEKQCSMLDFDLKQSQQKVEHLLQQKERLE--DEVKNL 1384 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + ++E +++ EL+ +A +LK ++ K +I L RL Sbjct: 1385 SLQLEQETNKRIMAQN-----------ELKAQAFEADNLKGSEKQLKQEINTLLEAKRLL 1433 Query: 388 QAEADMF--QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 + E Q + +E + E K LK + E + Q +E Sbjct: 1434 EVELAQLAKQYRGNEGQMR-ELQDQLEAEQYFSTLYKTQVKELKEEIDEKNKETQRKMQE 1492 Query: 446 LKAQE---NSQCDFDPMKMRMESEIRGLL 471 L+ ++ +Q D K E R LL Sbjct: 1493 LQNEKETLTTQLDLAETKAESEQLARALL 1521 >gi|34785071|gb|AAH56775.1| Hypothetical protein MGC63512 [Danio rerio] Length = 570 Score = 42.5 bits (99), Expect = 0.027 Identities = 27/126 (21%), Positives = 40/126 (31%), Gaps = 16/126 (12%) Query: 158 VICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNH 217 +C + D C IGCD CS W H DC + T +++C C Sbjct: 27 CVCRRPDIN---CFMIGCDSCSEWFHGDC----------IKISEKTAKTIRVWYCEKCRS 73 Query: 218 TSELFGFV---KDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL 274 E K + A + DF RGS R ++ + + + Sbjct: 74 KDETLEVKYRPKKSREKEAETDGPDTQPDTPDFKSDGRRGSRIKRSARMCGECEACLRTE 133 Query: 275 KSKLID 280 L D Sbjct: 134 DCGLCD 139 >gi|61809353|ref|XP_592197.1| PREDICTED: similar to GD:DSP [Bos taurus] Length = 3044 Score = 42.5 bits (99), Expect = 0.028 Identities = 33/201 (16%), Positives = 83/201 (41%), Gaps = 15/201 (7%) Query: 258 ARGKKLFWKADELIEKLK------SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLI 311 ++ KKL + + + LK + L L+ + + ++ +G Sbjct: 1754 SKRKKLEEELEGMRRTLKEQAIKVTSLTQQLEQASIVKKRSEDELRQQRDTLDGHLREKQ 1813 Query: 312 APQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQ 371 QD +A V+ R++ E ++A++ + + +EDK+ ++ + K+E + Sbjct: 1814 RTQDELRRLASEVEALRRQLLQEQES----VRQAQTRNEHFQKAIEDKSRSLNESKIEIE 1869 Query: 372 KKKPQIEELESIVRLKQAEADMFQLKADEARR---EAEXXXXXXXXXXXXXXXXYTSKYL 428 + + E L + + E +L+ D+ +R EA+ ++ L Sbjct: 1870 RLQSLTESLTKEHLMLEEELRQLRLEYDDLQRGRSEADHDKNATIAELRNQLQISNNRTL 1929 Query: 429 KLR--LSEAEERRQYLFEELK 447 +L+ +++ + R+ L +E++ Sbjct: 1930 ELQGLINDLQRERENLRQEIE 1950 >gi|73959238|ref|XP_547141.2| PREDICTED: similar to periplakin [Canis familiaris] Length = 1778 Score = 42.5 bits (99), Expect = 0.028 Identities = 21/137 (15%), Positives = 49/137 (35%), Gaps = 11/137 (8%) Query: 256 EDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQD 315 E R + L + + L +KL + L + + + + E + + Sbjct: 1491 ERHRRQVLESELETLRKKLVN-LEKMEVKEKVVFSESVQVEKGNTEQEIQKLKSSLE--- 1546 Query: 316 ACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKP 375 E + ++ ++ + E K+ + S +EL+ L++ERQ + Sbjct: 1547 ---EESRSKRELDAEVSRL-EAKLSELEFCNS---KSSKELDFLREENHRLQLERQSLQL 1599 Query: 376 QIEELESIVRLKQAEAD 392 + L+S + + E Sbjct: 1600 ETRRLQSEIEMAATETR 1616 >gi|30841496|gb|AAP34402.1| CDC42-binding protein kinase beta [Mus musculus] Length = 1713 Score = 42.5 bits (99), Expect = 0.029 Identities = 44/222 (19%), Positives = 80/222 (36%), Gaps = 38/222 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKE-LDFVRKI---------FRGSEDARGKKLFWK 266 ++ +++ Q A L +E L+ RK+ GS A G K Sbjct: 426 KDEDVQRDLENSLQIEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSTRALGNSNRDK 485 Query: 267 ----ADELIEKLKSKLIDP---LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN- 318 +E +E++KSK+ D + QE + + L+ E + +A Q+ Sbjct: 486 EIKRLNEELERMKSKMADSNRLERQLEDTVTLRQEHEDSTHRLKGLEKQYRLARQEKEEL 545 Query: 319 ----------------EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACA 362 E+ + Q R ++ +E RM + RS+ R+L DK Sbjct: 546 HKQLVEASERLKSQTKELKDAHQQRKRALQEFSELNERMS-ELRSLKQKVSRQLRDKEEE 604 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 + + + + + E K+ EA + A EA +E Sbjct: 605 MEVAMQKIDSMRQDLRKSEK--SRKELEARLEDAAA-EASKE 643 >gi|55637049|ref|XP_508792.1| PREDICTED: similar to ALL-1 protein [Pan troglodytes] Length = 4319 Score = 42.1 bits (98), Expect = 0.029 Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 22/120 (18%) Query: 125 RCRNIACQNLLPADDCD---------CDICSNKKGFCNLCMCVICSKFDFASNT-CRWIG 174 RC+ +C + P D C C+ F C +C K + + + Sbjct: 1901 RCK--SCGSTTPGKGWDAQWSHDFSLCHDCAKL--FAKGNFCPLCDKCYDDDDYESKMMQ 1956 Query: 175 CDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIAC--NHTSELFGFVKDVFQH 231 C C W H+ C + + + ++ + + + C+ C H +E ++ Q Sbjct: 1957 CGKCDRWVHSKCENLSDEMYEILSNL-----PESVAYTCVNCTERHPAEWRLALEKELQI 2011 >gi|45383005|ref|NP_989918.1| myosin, heavy polypeptide 7B, cardiac muscle, beta [Gallus gallus] Length = 1941 Score = 42.1 bits (98), Expect = 0.030 Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 27/167 (16%) Query: 259 RGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN 318 R L + +EL L+ A +L + +L + + LI + Sbjct: 1685 RNNLLLAEVEELRAALEQAERSRKLAEQELLEATERV-----NLLHSQNTGLINQKKKLE 1739 Query: 319 --------EIAEVVQDTARKME----VVAEEKMR--MFKKARSVLDACDRELEDKACAVT 364 E+ + VQ+ E + + M KK + +R ++ + Sbjct: 1740 TDISQLSSEVEDAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIK 1799 Query: 365 DLKMERQKKKP--------QIEELESIVRLKQAEADMFQLKADEARR 403 DL+M + + QI++LE+ VR + E DM Q K EA++ Sbjct: 1800 DLQMRLDEAEQIALKGGKKQIQKLEARVRELEGELDMEQKKMAEAQK 1846 >gi|58037461|ref|NP_084017.1| hypothetical protein LOC76787 [Mus musculus] Length = 1043 Score = 42.1 bits (98), Expect = 0.030 Identities = 37/200 (18%), Positives = 70/200 (35%), Gaps = 20/200 (10%) Query: 220 ELFGFVKDVFQHCA------PNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEK 273 E+ +K +F+H AL EL ++R SE+ + ++L D+ +K Sbjct: 151 EVLKALKSLFEHHKALDEKVRERLRMALENELASKESLYRQSEE-KSRQLAEWLDDAKQK 209 Query: 274 LKSKLIDPLDACNFILMFFQECDSDSPSLE-NGEGGFLIAPQDACNEIAEVVQDTARKME 332 L+ L Q + + + E +G + +A E E Q+ R + Sbjct: 210 LQQTLQKAETLPEIEAQLAQRVAALNKAEERHGNFEERLRQLEAQLE--EKNQELQRARQ 267 Query: 333 V----------VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELES 382 ++E ++ ++ L +E L E K +EL Sbjct: 268 REKMNDDHNKRLSETVDKLLSESNERLQLHLKERMGALEEKNSLSEEIANMKKLQDELLL 327 Query: 383 IVRLKQAEADMFQLKADEAR 402 AE + Q++ D+ R Sbjct: 328 NKEQLLAEMERMQMEIDQLR 347 >gi|54644888|gb|EAL33628.1| GA18599-PA [Drosophila pseudoobscura] Length = 1662 Score = 42.1 bits (98), Expect = 0.031 Identities = 34/219 (15%), Positives = 80/219 (36%), Gaps = 16/219 (7%) Query: 262 KLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIA 321 +L K ++ +++L + L+ + + + L+ E + + Sbjct: 512 QLQDKLSAQKQETEARLAEQLEEEQRLRENLKYLQEQNVILQ-AELVAKDESLEKFSLSQ 570 Query: 322 EVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVT-------DLKMERQKKK 374 + + R++ ++ EE R ++A+++ D++L KA + LK Sbjct: 571 SGIDNLRRELALLKEENDRQSQEAQAL---FDQKLAAKAEELALVAGQLQQLKSASDSMM 627 Query: 375 PQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE 434 Q + ++ Q E M + E R++ + L+ + + Sbjct: 628 SQRANMSEECQILQMEIRMRDEQIKEQRQQVDELTTQLNVQKADNSAL--DDMLRQQQAS 685 Query: 435 AEERR---QYLFEELKAQENSQCDFDPMKMRMESEIRGL 470 AEER Q +ELK + + + +ME ++ + Sbjct: 686 AEERGVQLQKRLDELKQIKEAMEKHEQQTQKMEHKLSEV 724 >AAA_CLPB_201-396_PF00004.17 Length = 196 Score = 42.1 bits (98), Expect = 0.031 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ PS+E+ G ++ E+ V+ T + A R Sbjct: 133 RFQQIFVGEPSVEDTVG--ILRGLKDRYEVHHGVRITDSALVAAAALSDRYI-------- 182 Query: 351 ACDRELEDKA 360 R L DKA Sbjct: 183 -TARFLPDKA 191 >gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio] Length = 3377 Score = 42.1 bits (98), Expect = 0.035 Identities = 46/187 (24%), Positives = 67/187 (35%), Gaps = 25/187 (13%) Query: 221 LFGFVKD-VFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 L G +KD Q + L + + V + R L + DEL ++ Sbjct: 2644 LHGHLKDAQLQLDDALRGNDDLKENIAIVER--------RNNLLQAELDELRSLVEQTER 2695 Query: 280 DPLDACN---FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE 336 A + Q S + SL N + E+ E VQ+ AE Sbjct: 2696 GRKLAEQELMDVSERVQLLHSQNTSLLNQKKKLEGDNTQLQTEVEEAVQECRN-----AE 2750 Query: 337 EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKK--KPQIEELESIVRLKQAEADMF 394 EK KKA + EL K T +ER KK + I S VR ++E +M Sbjct: 2751 EK---AKKAITDAAMMAEEL--KKEQDTSAHLERMKKNMEQTIRTC-STVRELESEVEME 2804 Query: 395 QLKADEA 401 Q KA ++ Sbjct: 2805 QRKASDS 2811 Score = 40.6 bits (94), Expect = 0.084 Identities = 40/242 (16%), Positives = 87/242 (35%), Gaps = 36/242 (14%) Query: 265 WKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + +E +KL +L D +A + + L+N ++ + + A + Sbjct: 2382 EELEEAKKKLAQRLQDAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALD 2441 Query: 325 QDTARKMEVVAEEKMRM----------FKKARSV-----------------LDACDRELE 357 + +V+AE K + K++RS+ L++ RE + Sbjct: 2442 KKQRNFDKVLAEWKQKYEESQTELESAQKESRSLSTELFKLKNSYEESLDHLESMKRENK 2501 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ--LKADEARREAEXXXXXXXXX 415 + ++DL + + I ELE + + + E Q L+ E E E Sbjct: 2502 NLQEEISDLTEQLGESGKNIHELEKVRKQLEQEKQEIQTALEEAEGSLEHEEGKILRAQL 2561 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQY-------LFEELKAQENSQCDFDPMKMRMESEIR 468 + L + E E+ ++ L L+++ S+ + +K +ME ++ Sbjct: 2562 EFNQVKADIERKLSEKDEEMEQAKRNQQRVVDTLQSSLESETRSRNEALRLKKKMEGDLN 2621 Query: 469 GL 470 + Sbjct: 2622 EM 2623 >gi|68353052|gb|EAN33812.1| hypothetical protein, conserved [Theileria parva] Length = 1947 Score = 42.1 bits (98), Expect = 0.037 Identities = 50/285 (17%), Positives = 98/285 (34%), Gaps = 56/285 (19%) Query: 225 VKDVFQHCAPNWDFEALIK-----ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 +++ D E L K EL K + SE+ +L + L + +S+ + Sbjct: 970 LQEQLDTIKSKKDAEDLEKIKLQSEL-ATLKAQKESEELSRIRLESELATLKAQKESEEL 1028 Query: 280 DP--LDACNFILMFFQECDSDSPSLENGEGGFLIAP-----------QDACNEIA----- 321 + L + L +E + S E L A Q+ N I Sbjct: 1029 EKIKLQSELATLKSQKESEELSRIRLESELDTLKAQKESEEQARIRLQEEQNRIISENQM 1088 Query: 322 ---EVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD------------- 365 E ++ ++E E + ++ R L+ DRE ++D Sbjct: 1089 ALEEQKREFDAELERQNSELQKQLEQIRIDLEHSDRERRLLEKELSDQLQIQKENDPDKI 1148 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 L++ER + + + + ++ K E L+ + R + E Sbjct: 1149 LELERARLRDEWNREQETIKRK-WEESQEHLRKEMIRMQKELEEQD-------------- 1193 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGL 470 + + SE E + L EL ++ + + ++R+ESE+ L Sbjct: 1194 RIKAQKESE-ELEKIKLQSELATLKSQKESEELSRIRLESELDTL 1237 Score = 39.0 bits (90), Expect = 0.32 Identities = 51/309 (16%), Positives = 109/309 (35%), Gaps = 63/309 (20%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 + ++ E L KE+ ++K + + +K + + KL+S+L Sbjct: 1159 EWNREQETIKRKWEESQEHLRKEMIRMQKELEEQDRIKAQKESEELE--KIKLQSELATL 1216 Query: 282 LD-ACNFILMFFQ-ECDSDS-PSLENGEGGFLIAPQDACNEIA--------EVVQDTARK 330 + L + E + D+ + + E I Q+ N I E ++ + Sbjct: 1217 KSQKESEELSRIRLESELDTLKAQKESEEQARIRLQEEQNRIISENQMALEEQKREFDAE 1276 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD-------------LKMERQKKKPQI 377 +E E + ++ R L+ DRE ++D L++ER + + + Sbjct: 1277 LERQNSELQKQLEQIRIDLEHSDRERRLLEKELSDQLQIQKENDPDKILELERARLRDEW 1336 Query: 378 ---------------EEL-ESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXX 421 E L + ++R+++ + ++KA + E E Sbjct: 1337 NREQETIKRKWEESQEHLRKEMIRMQKELEEQDRIKAQKESDELEKIKLQEQLDTLKSKK 1396 Query: 422 XYTSKYLKLRLS----------EAEERRQYLFEELK---------AQENSQCDFDPMKMR 462 + + ++RL E+EE+ + +E + A E + +FD R Sbjct: 1397 E-SEELARIRLESELDTLKAQKESEEQARIRLQEEQNRIISENQMALEEQKREFDAELER 1455 Query: 463 MESEIRGLL 471 SE++ L Sbjct: 1456 QNSELQKQL 1464 >gi|71415601|ref|XP_809862.1| hypothetical protein Tc00.1047053507849.70 [Trypanosoma cruzi] Length = 712 Score = 42.1 bits (98), Expect = 0.038 Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 26/177 (14%) Query: 232 CAPNWD--FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFIL 289 WD E L+ EL+ K+ L + ++ K + L Sbjct: 263 KKDIWDKLQEDLM-ELENSPKLTDSVATTNETILELSMEIVVLKQALEEASKLT------ 315 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 + + +++ + A NE+A T R + + EEK+ + + + Sbjct: 316 --QKAQFEEKKNVDTLRSQ-TLELDHAKNEVAH----TRRALTALEEEKVEIQGQIEASR 368 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEE---LESIVRLKQAEADMFQLKADEARR 403 E+K + + + E QK K EE ++ +L + E F++ DEAR+ Sbjct: 369 -------ENKRKQLQETENEIQKVKDFYEEEHEIKETQKLFEMETQSFRVSLDEARK 418 >gi|47217446|emb|CAG10215.1| unnamed protein product [Tetraodon nigroviridis] Length = 826 Score = 41.7 bits (97), Expect = 0.041 Identities = 46/224 (20%), Positives = 85/224 (37%), Gaps = 30/224 (13%) Query: 268 DELIEKLKSKLIDPLDACNF-ILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 +EL+E + KL D ++C++ IL +EC+ + LI ++A + +QD Sbjct: 186 EELMEGMDVKLADLKNSCDYKILSVQEECEGQETN--YLSLAELIESKEADLR--DEIQD 241 Query: 327 TARKMEVVA-----------------EEKMRMFKKARSVLDACDRELEDKAC---AVTDL 366 K+ + A E ++ F K C E + K AV DL Sbjct: 242 LRAKLVLPANDSSLSSDSVLARLDSLESRLHSFDK-NKSAPCCSVEEKLKREHAEAVKDL 300 Query: 367 KMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSK 426 + + K +E+ S L A A + QL+ ++A Sbjct: 301 RESLEDKLASMEDRLS-TMLLDASAVV-QLRGQAEDQDALQTNVSSLRSSLQTLEERLDV 358 Query: 427 YLKLRLSEAEERRQYLFEELKA-QENSQCDFDPMKMRMESEIRG 469 +L E + + E +K ++ + D D ++ R+E++I Sbjct: 359 LDRLCSKECSA-KSAVLENIKQDLQSCRSDVDAVETRLEAQIND 401 >gi|55596776|ref|XP_515556.1| PREDICTED: similar to dynactin 1 isoform 1; p150, Glued (Drosophila) homolog; dynactin 1 (p150, Glued (Drosophila) homolog); 150 kDa dynein-associated polypeptide; p150-glued [Pan troglodytes] Length = 1768 Score = 41.7 bits (97), Expect = 0.041 Identities = 38/240 (15%), Positives = 85/240 (35%), Gaps = 31/240 (12%) Query: 260 GKKLFWKADELIEKLKS-KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN 318 + L + +L EKL++ +L D +E + + Q+ Sbjct: 670 EEGLRAQVRDLEEKLETLRLKRAEDKAK-----LKELEK-HKIQLEQVQEWKSKMQEQQA 723 Query: 319 EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA-----CDRELEDKACAVTDLKMERQKK 373 ++ +++ ++ + E K R ++ DA D+E+ ++ L+ E + Sbjct: 724 DLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAE--SLQQEVEAL 781 Query: 374 KPQIEELESIVRLKQAEAD------------MFQLKADEAR-REAEXXXXXXXXXXXXXX 420 K +++EL + + + +AE + + QL+ AR ++A Sbjct: 782 KERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEH 841 Query: 421 XXYTSKYLK--LRLSEAEERRQYLFEELKAQENSQCDFDPM--KMRMESEIRGLLKGMEM 476 K L ++R+ L EEL E++ + E+ +L + Sbjct: 842 VKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNL 901 >gi|27803037|emb|CAD60740.1| unnamed protein product [Podospora anserina] Length = 1363 Score = 41.7 bits (97), Expect = 0.041 Identities = 31/169 (18%), Positives = 68/169 (40%), Gaps = 31/169 (18%) Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 ++L + D++ +KL+ + + A N + + + + S+ ++ Sbjct: 383 HNVRRLEQQVDDMKDKLQDAVAEKERAENDLEEL--QEEMANKSVVTKGLSR--QVEEKV 438 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMF----------KKARSVLDACDR-----------EL 356 + + V ++ VVAEE+ K+AR D+ +R E Sbjct: 439 SRLQAEVDKARQECAVVAEEREVQQREMETLRAKLKEAREERDSAERLRLAIEGQLNEEQ 498 Query: 357 EDKACAVTDLKMERQKKKPQIEELESI-----VRLKQAEADMFQLKADE 400 + +L+M+ + + + ++ E I +L QA+AD ++ADE Sbjct: 499 GSQRKEFDELRMQLKSARQERDDAERIRLSLEAKLDQAQAD-LNMRADE 546 >gi|37360977|ref|NP_808482.2| CAZ-associated structural protein [Mus musculus] Length = 1002 Score = 41.7 bits (97), Expect = 0.042 Identities = 37/227 (16%), Positives = 77/227 (33%), Gaps = 29/227 (12%) Query: 264 FWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV 323 K + L +K+++ D + S N A + E Sbjct: 538 ERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNT--------DTALATLEEA 589 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELE-- 381 + + R +E + E++ R ++ +++ +E +D V L+ E +K+ + +L+ Sbjct: 590 LSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNALQAELTEKESSLIDLKEH 649 Query: 382 ----------SIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR 431 +LK E + Q K + + EA+ + + +L Sbjct: 650 ASSLASAGLKRDSKLKSLEIAIEQKKEECNKLEAQLKKAHNIEDDSRMNPEFADRLKQLD 709 Query: 432 LS---------EAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRG 469 +A+ L E LK EN + D D +E ++ Sbjct: 710 KEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELERHMKD 756 >gi|2351219|dbj|BAA22067.1| myosin heavy chain [Cyprinus carpio] Length = 1933 Score = 41.7 bits (97), Expect = 0.047 Identities = 40/178 (22%), Positives = 68/178 (38%), Gaps = 30/178 (16%) Query: 324 VQDTARKMEVVAEEKMRMFKK---ARSVLD----ACDRELEDKACAVTDLKMERQKKKPQ 376 ++D +++ ++E R R+ L R+LE+K V+ L +Q Q Sbjct: 1251 LEDQLSEIKAKSDENSRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQ 1310 Query: 377 IEEL----ESIVRLKQAEADMFQ---------LKADEARREAEXXXXXXXXXXXXXXXXY 423 IE+L E V+ K A A Q + E +EA+ + Sbjct: 1311 IEDLKRHVEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRGMSKANSEVAQW 1370 Query: 424 TSKYLK---LRLSEAEERRQYLFEELKAQENSQ-------CDFDPMKMRMESEIRGLL 471 +KY R E EE ++ L + L+ E S + K R++SE+ L+ Sbjct: 1371 RAKYETDAIQRTEELEESKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQSEVEDLM 1428 >gi|60360056|dbj|BAD90247.1| mKIAA1052 protein [Mus musculus] Length = 1172 Score = 41.3 bits (96), Expect = 0.053 Identities = 49/264 (18%), Positives = 90/264 (34%), Gaps = 47/264 (17%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLD-ACNFILMFFQECD 296 E L L+ + S L K + +K +++L + L A + Sbjct: 492 LEQLCSSLEAKHQEVISS-------LQKKIEGAQQKEEAQLQESLGWAEQRAHQKVHQVT 544 Query: 297 SDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDR-- 354 L + ++ EV ++ RKM+ + EE + AR +A +R Sbjct: 545 EYEQELSS----------LLRDKRQEVEREHERKMDKMKEEHWQEMADARERYEAEERKQ 594 Query: 355 ----------ELEDKACA-VTDLKMERQKKKPQIEELESIVR-----LKQAEADMFQLKA 398 ELE A +L+ RQ++ Q+E+L R L+ E ++ Sbjct: 595 RADLLGHLTGELERLRRAHERELESMRQEQDQQLEDLRRRHRDHERKLQDLEVELSSRTK 654 Query: 399 DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR----------LSEAEERRQYLFEELKA 448 D R A+ + L L EA++ +L E + Sbjct: 655 DVKARLAQLNVQEENIRKEKQLLLDAQRQAALEREEATATHQHLEEAKKEHTHLLETKQQ 714 Query: 449 QENSQCDFDPMKMRMESEIRGLLK 472 + D ++ +ES++ LL+ Sbjct: 715 LRRTIDDLRVRRVELESQV-DLLQ 737 >gi|16945384|emb|CAB97305.2| related to transcription factor TMF [Neurospora crassa] Length = 900 Score = 41.3 bits (96), Expect = 0.058 Identities = 44/221 (19%), Positives = 75/221 (33%), Gaps = 51/221 (23%) Query: 228 VFQHCAPNWDFEALIKELDFVRK---------IFRGSEDARGKKLFWKADELIEKLKSK- 277 + A +AL +L ++ + + KKL K ++ + ++ Sbjct: 241 QDEIYAYVERIDALEAKLQYLAREASAAARKEALSAPAGSAEKKLAEKDQQIAQLMEEGK 300 Query: 278 -LIDPLDACNFILMFFQECD-SDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 L IL ++ D + N + A + A EI ++ + A Sbjct: 301 NLASNEQKLRTILKNLRKKQAEDEKDMGNLKA----AKEKADREI----ENLRK-RARHA 351 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAV-------TDLKMERQKKKPQ------------ 376 +E + + + LD REL V +L+ + QK Q Sbjct: 352 DELEKSQNELQKRLDQSQRELNYLRPEVKSKDTIIAELRSQIQKATEQADVMSAKANDKA 411 Query: 377 -------IEELESIVRLKQAE----ADMFQLKADEARREAE 406 I ELE V + E AD + +ADE R+EAE Sbjct: 412 REQDQRRIAELEESVEALKIEKNLMADRAKAQADELRKEAE 452 >PHD_Q7RRN5_1438-1494_PF00628.16 Length = 57 Score = 40.9 bits (95), Expect = 0.065 Identities = 12/37 (32%), Positives = 19/37 (51%) Query: 156 MCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGL 192 C+IC++ ++ +W+ CDVC W H C E Sbjct: 1 FCIICNEKYKVDDSNKWVECDVCKFWIHLSCDKDEDR 37 >gi|33468583|emb|CAE30366.1| novel protein similar to human non-muscle myosin, heavy polypeptide 10 (MYH10) [Danio rerio] Length = 1065 Score = 40.9 bits (95), Expect = 0.067 Identities = 37/220 (16%), Positives = 81/220 (36%), Gaps = 40/220 (18%) Query: 271 IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAE------VV 324 +KL+ + + ++ + D LE+ FL + + + E Sbjct: 861 RQKLQLEKVTAEAK-------IKKMEEDILLLEDQNSKFLKEKKLLEDRVGEMTSQLAEE 913 Query: 325 QDTARKMEVVAEEKMRMFKKARSVL---DACDRELEDKAC----AVTDLKMERQKKKPQI 377 ++ A+ + V ++ M L + +ELE TDL+ + + + QI Sbjct: 914 EEKAKNLGKVKNKQEMMMVDLEERLKKEEKTRQELEKAKRKLDAETTDLQDQIAELQAQI 973 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE 437 +EL+ + K+ E + DE + +LR E + Sbjct: 974 DELKIQLAKKEEELQAVLARGDE------------------EVAQKNNALKQLR--ELQA 1013 Query: 438 RRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 + L E+L++++ ++ + +K + E+ L +E T Sbjct: 1014 QLAELQEDLESEKAARNKAEKLKRDLSEELEALKTELEDT 1053 >gi|24660442|gb|AAH39612.1| MYO18A protein [Homo sapiens] Length = 2002 Score = 40.9 bits (95), Expect = 0.068 Identities = 46/272 (16%), Positives = 86/272 (31%), Gaps = 66/272 (24%) Query: 264 FWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIA---PQDACNE- 319 K + + K+K +L D QE + D + L + E Sbjct: 1530 ESKDEASLAKVKKQLRDLEAKVKD-----QEEELDEQAGTIQMLEQLKQMEVQLEEEYED 1584 Query: 320 ---IAEVVQDTARKME----------VVAEEKMRM--------FKKARSVLDACDRELED 358 + ++ K+ +E+++R A+ +LD Sbjct: 1585 KQKVLREKRELEGKLATLSDQVNRRDFESEKRLRKDLKRTKALLADAQLMLDHLKNSAPS 1644 Query: 359 KA---------------CAVT-----DLKMERQKKKPQIEELESIVRLKQAEADMFQLKA 398 K CA +++E + QI+++ + + Q + Sbjct: 1645 KREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTALEEQLSRLQREK 1704 Query: 399 DEA--RREAEXXXXXXXXXXXXXXXXYTSKYLKL------RLSEAEERRQYLFEELKAQE 450 +E R E + S+ L +L EA + +Q L E+L+A + Sbjct: 1705 NEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEKQELQEKLQALQ 1764 Query: 451 NSQCDFDPMKM-------RMESEIRGLLKGME 475 SQ +F M R E++IR L +E Sbjct: 1765 -SQVEFLEQSMVDKSLVSRQEAKIRELETRLE 1795 >gi|66857698|ref|ZP_00401742.1| SMC protein, N-terminal:Structural maintenance of chromosome protein SMC, C-terminal:SMCs flexible hinge [Anaeromyxobacter dehalogenans 2CP-C] Length = 1199 Score = 40.9 bits (95), Expect = 0.072 Identities = 36/199 (18%), Positives = 73/199 (36%), Gaps = 12/199 (6%) Query: 279 IDPLDACNF-ILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV----VQDTARKMEV 333 PL+ L +E ++ E F +A + + ++ + ++ Sbjct: 672 GGPLEGEGHGALQRRREVQELEETVRGFEAEFSLAQ--ERHRTLQARLLQLEAALKSLDK 729 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEEL---ESIVRLKQAE 390 EK + L ELE L+ ER++ + + L E R+ A Sbjct: 730 DGREKELALVEEEKDLARVGSELERVGDRTGQLEAERKQLEEAVAGLVREEEEHRVAAAT 789 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE 450 A+ Q +A+E REA + LK++ + ERR+ + LK + Sbjct: 790 AEAEQGRAEERAREAVAALEHTRARGDVLSAELMN--LKVKAAADAERREGIGSALKRID 847 Query: 451 NSQCDFDPMKMRMESEIRG 469 +++ + D + R+ + + Sbjct: 848 DARREVDERRGRLFAALSE 866 >gi|56205924|emb|CAI24426.1| myosin XVIIIa [Mus musculus] Length = 2050 Score = 40.9 bits (95), Expect = 0.076 Identities = 47/261 (18%), Positives = 89/261 (34%), Gaps = 38/261 (14%) Query: 234 PNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL--KSKLIDPLDACNFILMF 291 + D E +K+ +L + ++ + L K +L L + Sbjct: 1587 ESRDEEVEEARQSCQKKL-----KQMEVQLEEEYEDKQKALREKRELESKLSTLSD--QV 1639 Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEI--AEVVQDTARKMEVVAEEKMRMFKKARSVL 349 Q L A A +I + + K E +A+ K +++ Sbjct: 1640 NQRDFESEKRLRKD-LKRTKA-LLADAQIMLDHLKNNAPSKRE-IAQLK-NQLEESE--- 1692 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEE-------LESIVRLKQAEADMFQLKADEAR 402 KA +++ME QI++ LE + Q E + Q + +E + Sbjct: 1693 --FTCAAAVKARKAMEVEMEDLHL--QIDDIAKAKTALEEQLSRLQREKNEIQNRLEEDQ 1748 Query: 403 REA-EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM 461 + E L+ ++ E+ + +Q L E+L+A + SQ +F M Sbjct: 1749 EDMNELMKKHKAAVAQASRDMAQMNDLQAQIEESNKEKQELQEKLQALQ-SQVEFLEQSM 1807 Query: 462 -------RMESEIRGLLKGME 475 R E++IR L +E Sbjct: 1808 VDKSLVSRQEAKIRELETRLE 1828 >gi|71754745|ref|XP_828287.1| hypothetical protein Tb11.46.0004 [Trypanosoma brucei] Length = 568 Score = 40.9 bits (95), Expect = 0.080 Identities = 23/152 (15%), Positives = 56/152 (36%), Gaps = 14/152 (9%) Query: 256 EDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQD 315 + + +L ++ +S + L + +++ ++ + Sbjct: 277 KRHHQANMEAFCRQLRQEEESFRQRMEARESERLQLLEHIEAEEQ---------WLSQRL 327 Query: 316 ACNEIAEVVQDTARKM-EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKK 374 A E ++ A++ E E R +A L +R + +A + + RQK Sbjct: 328 ADRERQRALEIEAKERAEREQRELYREHVEAEEELLR-NRLQQYEASRKMEAEKARQK-- 384 Query: 375 PQIEELESIVRLKQAEADMFQLKADEARREAE 406 + E+ E + AE + + + ++ +EAE Sbjct: 385 -EKEDREELYEHVLAEEQLIRQRLEQREKEAE 415 >gi|19075291|ref|NP_587791.1| hypothetical protein SPCC594.05c [Schizosaccharomyces pombe 972h-] Length = 424 Score = 40.9 bits (95), Expect = 0.080 Identities = 35/230 (15%), Positives = 69/230 (30%), Gaps = 48/230 (20%) Query: 158 VICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNH 217 IC K D + +GCD C W H + + + + C C Sbjct: 121 CICQKPD---DGSWMLGCDGCEDWFH----------GTCVNIPESYNDLTVQYFCPKCTE 167 Query: 218 TSELFGFVK---DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL 274 + K + + P S+ D EK+ Sbjct: 168 EGKGITTWKRKCRLRECSNPTRPNSNYC------------SDKHG-------VDFFREKV 208 Query: 275 KSKLIDPLDACNFIL-----MFFQECDSDSPSLENGEGGFLIAPQ--DACNEIAEVVQDT 327 K ++P N +L FQ + P+L + ++ + N + + Sbjct: 209 KLSTVEPSAIKNLVLFAKKREEFQNLGTVGPTLPSQVPPEVVYNFEIEEANRLNAEIVQL 268 Query: 328 ARKMEVVAEEK--MRMFKKARSVLDACDRELEDKACAV----TDLKMERQ 371 ++ EV + +K +++ K + +E E + + L +Q Sbjct: 269 NKEKEVASNKKIFLQLIKDSSRRAVLAYKEREGIKKDLCGFDSRLLFNQQ 318 >gi|68359767|ref|XP_690700.1| PREDICTED: similar to SPECC1 protein [Danio rerio] Length = 938 Score = 40.9 bits (95), Expect = 0.082 Identities = 41/230 (17%), Positives = 80/230 (34%), Gaps = 40/230 (17%) Query: 255 SEDARGKKLFWKADELIEKLK------SKLIDPLDACNFILMFFQECDSDS-PSLENGEG 307 S +R +L + E +E + + L L + + SL EG Sbjct: 332 SRASRMAELEQRLAEQVESSRFEREKLVDIQQQLTGSLRALEKENQEAQTAVKSLREEEG 391 Query: 308 ---GFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVT 364 G L + + A +E ++ ME + + + ++E + V Sbjct: 392 LLQGHLESEKLARDEAVRKTEEQRLAMEALRVDN-----------ASMKAQVEVERQKVA 440 Query: 365 DLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYT 424 +LK Q E L+S++++ + D ++ E R+E + T Sbjct: 441 ELK-AVQSASDNTE-LQSLLKVAHEDRDKLEMTCTELRQELQQVCSEVEYV--------T 490 Query: 425 SKYLKLRLSEAEERRQYLFEELKAQENSQ----CDFDPMKMRMESEIRGL 470 K+ E RQ L E+++ QE + + E++I+ L Sbjct: 491 CHTFKV-----EADRQQLLEKVEKQEQDHKANTNSLEEKSIDAENQIKDL 535 >gi|72109196|ref|XP_787266.1| PREDICTED: similar to Inner centromere protein [Strongylocentrotus purpuratus] Length = 1077 Score = 40.9 bits (95), Expect = 0.082 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 55/230 (23%) Query: 265 WKADELIEKLKSKLIDPLD--ACNFILMFFQECDSDSPSLENGEGGF---LIAPQDACNE 319 + L K KL+ P + + + F Q + + + L+ Q Sbjct: 715 SFLNVLNANKKKKLVCPGTPQSGSVVTSFIQRNTPQKRTFKEQQQERKALLLEKQKKEEN 774 Query: 320 I----AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKM---ERQK 372 I E + + + E++MR K+ R++ + +E K + K ++ Sbjct: 775 IKKKMIEDRRKQLQDQKRTREDRMRRAKETRALQEEEKKERNQKMQEREEHKQKAEAEER 834 Query: 373 KKPQIEELESIVRLKQAEADMFQ---------------LKADEARREAEXXXXXXXXXXX 417 +K ++E ++ ++ E Q +A+E R++AE Sbjct: 835 RKQEMESKLRKIKEQEEEKRRHQHLMDRRREHEEQERQRRAEEQRQQAE----------- 883 Query: 418 XXXXXYTSKYLKLRLSEAEERRQYLFEEL--KAQENSQCDFDPMKMRMES 465 +LRL ++ + EE+ K ++ + + K++ ES Sbjct: 884 -----------QLRL----KQERLRLEEIMKKKEQTLIREKEQQKLKEES 918 >gi|37362206|gb|AAQ91231.1| differentially expressed in FDCP 6-like protein [Danio rerio] Length = 628 Score = 40.6 bits (94), Expect = 0.087 Identities = 34/191 (17%), Positives = 69/191 (36%), Gaps = 27/191 (14%) Query: 306 EGGFLIAPQDACNEI-AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVT 364 EG + ++ R+ + +++R ++ R + EL +A Sbjct: 311 EGKTSLHKDLKLKRRDQREQREKRREAKEQELQRLRALQEERE-RKMAELELLKEAQRQA 369 Query: 365 DLKME--RQKKKPQIEELESI--VRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXX 420 +E Q+++ Q E+L ++LK+AE ++A+ A +EAE Sbjct: 370 QAMLEQDEQRRRQQHEQLHQALEIQLKEAEEARASMQAEMALKEAEAEKQRTRIRELEAM 429 Query: 421 XXYTS----------------KYLKLRLSEAEERRQYLFEELKAQ-----ENSQCDFDPM 459 +Y + RL EE + L+ + + +Q + + Sbjct: 430 QQRLEDALQQEIKARQDEEAFRYAQARLLAEEEEKMKALMGLREEQEEYIQRAQREKQEL 489 Query: 460 KMRMESEIRGL 470 + MES+ R L Sbjct: 490 RQEMESKSRAL 500 >gi|50751217|ref|XP_422300.1| PREDICTED: similar to Tpr [Gallus gallus] Length = 2366 Score = 40.6 bits (94), Expect = 0.093 Identities = 41/242 (16%), Positives = 85/242 (35%), Gaps = 18/242 (7%) Query: 243 KELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSL 302 +EL+ ++ + + R +++ +E +++L KL + L + S Sbjct: 118 EELEAEKRDLVRTSERRSQEVE-HLNEDVKRLNEKLTEANT-EKVKLQLKLDELQTSDVT 175 Query: 303 ENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACA 362 L + + +++ +E + ++ S + LE+K Sbjct: 176 VKYREKRL-EQEKELLQSQNTW--LNSELKAKTDELLHTAREKGSEILELKCNLENKKEE 232 Query: 363 VTDLKMERQKKKPQIEELESIV-----RLKQAEADMFQLKADEARREAEXXXXXXXXXXX 417 V+ ++ + K E L+ V +LK+A+ Q + E R E Sbjct: 233 VSRMEEQINSLKQSNENLQKHVEDLLNKLKEAK---EQQASMEERFHNELNAHIKLSNLY 289 Query: 418 XXXXXYTSKYLKLRLSEAEERRQYLFEEL----KAQENSQCDFDPMKMRMESEIRGLLKG 473 S+ L+ A E L +E KA + + + K ME E+R + Sbjct: 290 KSAAD-DSEAKSNELTGAVEELHKLLKEAGEANKATQEHLAEVEESKAVMEKELREKISK 348 Query: 474 ME 475 +E Sbjct: 349 LE 350 >gi|68359769|ref|XP_690827.1| PREDICTED: similar to NSP5beta3beta [Danio rerio] Length = 945 Score = 40.6 bits (94), Expect = 0.097 Identities = 41/230 (17%), Positives = 80/230 (34%), Gaps = 40/230 (17%) Query: 255 SEDARGKKLFWKADELIEKLK------SKLIDPLDACNFILMFFQECDSDS-PSLENGEG 307 S +R +L + E +E + + L L + + SL EG Sbjct: 423 SRASRMAELEQRLAEQVESSRFEREKLVDIQQQLTGSLRALEKENQEAQTAVKSLREEEG 482 Query: 308 ---GFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVT 364 G L + + A +E ++ ME + + + ++E + V Sbjct: 483 LLQGHLESEKLARDEAVRKTEEQRLAMEALRVDN-----------ASMKAQVEVERQKVA 531 Query: 365 DLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYT 424 +LK Q E L+S++++ + D ++ E R+E + T Sbjct: 532 ELK-AVQSASDNTE-LQSLLKVAHEDRDKLEMTCTELRQELQQVCSEVEYV--------T 581 Query: 425 SKYLKLRLSEAEERRQYLFEELKAQENSQ----CDFDPMKMRMESEIRGL 470 K+ E RQ L E+++ QE + + E++I+ L Sbjct: 582 CHTFKV-----EADRQQLLEKVEKQEQDHKANTNSLEEKSIDAENQIKDL 626 >SMC_N_Q802S1_2-1167_PF02463.7 Length = 1166 Score = 40.6 bits (94), Expect = 0.097 Identities = 48/247 (19%), Positives = 92/247 (37%), Gaps = 25/247 (10%) Query: 243 KELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSL 302 K + ++ + + +KL + DA N L ++ +SD+ +L Sbjct: 766 KRAEEKYQVLEKKMKNAEAEREQELKAAQQKLTAAK-TKADAFNKGLK-QKQQESDAVAL 823 Query: 303 ENGEGGFLIAPQD----ACNEIAEVVQDTA----------RKMEVVAEEKMRMFKKARSV 348 E E A + A +E + +Q+ ++ A+E++ K+ V Sbjct: 824 ELEELRREQAGYEQQIQAVDEAMKAIQEQIDSMACTVSQNKEAVRKAQEELTKQKE---V 880 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXX 408 + A D+EL+ K+ L+ + + + +I+ELE + + + Q AD+ R E Sbjct: 881 IMAQDKELKVKSSEANHLREQNNEVQLKIKELEHNINKHRKDT---QDAADKVSRMLEEH 937 Query: 409 XXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIR 468 + + EA +R + L E E + M M E+E R Sbjct: 938 DWIHSARQSCGQPNTSYDFKTNNPKEAGQRLKRLEETKDKLERNVNR-RAMNMLSEAEER 996 Query: 469 --GLLKG 473 L+K Sbjct: 997 YNDLMKK 1003 >gi|74095929|ref|NP_001027796.1| SMC2 protein [Takifugu rubripes] Length = 1200 Score = 40.6 bits (94), Expect = 0.097 Identities = 48/247 (19%), Positives = 92/247 (37%), Gaps = 25/247 (10%) Query: 243 KELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSL 302 K + ++ + + +KL + DA N L ++ +SD+ +L Sbjct: 767 KRAEEKYQVLEKKMKNAEAEREQELKAAQQKLTAAK-TKADAFNKGLK-QKQQESDAVAL 824 Query: 303 ENGEGGFLIAPQD----ACNEIAEVVQDTA----------RKMEVVAEEKMRMFKKARSV 348 E E A + A +E + +Q+ ++ A+E++ K+ V Sbjct: 825 ELEELRREQAGYEQQIQAVDEAMKAIQEQIDSMACTVSQNKEAVRKAQEELTKQKE---V 881 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXX 408 + A D+EL+ K+ L+ + + + +I+ELE + + + Q AD+ R E Sbjct: 882 IMAQDKELKVKSSEANHLREQNNEVQLKIKELEHNINKHRKDT---QDAADKVSRMLEEH 938 Query: 409 XXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIR 468 + + EA +R + L E E + M M E+E R Sbjct: 939 DWIHSARQSCGQPNTSYDFKTNNPKEAGQRLKRLEETKDKLERNVNR-RAMNMLSEAEER 997 Query: 469 --GLLKG 473 L+K Sbjct: 998 YNDLMKK 1004 >gi|62656260|ref|XP_340821.2| PREDICTED: myosin heavy polypeptide 13 [Rattus norvegicus] Length = 1919 Score = 40.6 bits (94), Expect = 0.098 Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 41/198 (20%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADE--------------- 269 +K+ L +EL+ ++ +E R D Sbjct: 1684 LKEQLAIV--ERRNGLLQEELEEMKVALEQTERTRRLSEQELLDSSDRVQLLHSQNTSLI 1741 Query: 270 -LIEKLKSKL-IDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 +KL++ L + N I + + A + A + ++ Sbjct: 1742 NTKKKLEADLAQCQAEVENSIQESRNAEEK---------------AKKAITDAAMMAEEL 1786 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ + A RM K L+ ++L+ + L ++ KK QI++LE+ VR Sbjct: 1787 KKEQDTSAHL-ERMKKN----LEQTVKDLQHRLDEAEQLALKGGKK--QIQKLEARVREL 1839 Query: 388 QAEADMFQLKADEARREA 405 ++E D Q + EA + A Sbjct: 1840 ESELDAEQKRGAEALKGA 1857 >gi|68375370|ref|XP_686748.1| PREDICTED: similar to CDC42-binding protein kinase alpha isoform A [Danio rerio] Length = 397 Score = 40.6 bits (94), Expect = 0.099 Identities = 37/224 (16%), Positives = 73/224 (32%), Gaps = 22/224 (9%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDS 297 L K+ ++ E + L ++LK L I+M + D Sbjct: 41 RADLEKKTVHFKEELSRIEQQHA----NELKSLKKELKESEGQQLSLKKEIMMLKDKLD- 95 Query: 298 DSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE 357 + E + + +++EE ++ + L +++LE Sbjct: 96 -----------------KSRRESHSERDELEFERVLLSEENKKLSSELDKKLSCSNKQLE 138 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXX 417 +K + D K + QI E+ V ++ Q A + E E Sbjct: 139 EKIRVLADEKESVAHWEAQITEIIQWVSDEKDARGYLQALATKMTEELEGLKNASLGARA 198 Query: 418 XXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM 461 + KL +S E + L E+KA++ Q + + +K Sbjct: 199 TDMPWKVRRLAKLDMSARLELQSALDAEIKAKQTIQDELNKVKA 242 >gi|55642243|ref|XP_510462.1| PREDICTED: similar to sarcomeric tropomyosin kappa; TPM1-kappa [Pan troglodytes] Length = 1002 Score = 40.6 bits (94), Expect = 0.099 Identities = 46/250 (18%), Positives = 90/250 (36%), Gaps = 50/250 (20%) Query: 232 CAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADEL-----------------IEKL 274 A + L +++ K+ R SED R + L + + + L Sbjct: 748 KAAEDRSKQLEEDIAAKEKLLRVSEDERDRVLE-ELHKAEDSLLAAEEAAAKAEADVASL 806 Query: 275 KSK---LIDPLD-ACNFILMFFQECDSDSPSLENGEGGF--LIAPQDACNEIAEVVQDTA 328 + + + LD A + Q+ + + + E G + + E E+ + Sbjct: 807 NRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQL 866 Query: 329 RKMEVVAEEKMRMFKKAR--SVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV-R 385 ++ + +AE+ R +++ V+ D E ++ +++ K + EEL+++ Sbjct: 867 KEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELE-----EELKTVTNN 921 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 LK EA + E R E E K L +L EAE R ++ Sbjct: 922 LKSLEAQAEKYSQKEDRYEEEI------------------KVLSDKLKEAETRAEFAERS 963 Query: 446 LKAQENSQCD 455 + E S D Sbjct: 964 VTKLEKSIDD 973 >gi|61819731|ref|XP_599974.1| PREDICTED: similar to Intersectin 2 (SH3 domain-containing protein 1B) (EH and SH3 domains protein 2) (EH domain and SH3 domain regulator of endocytosis 2), partial [Bos taurus] Length = 443 Score = 40.6 bits (94), Expect = 0.10 Identities = 37/235 (15%), Positives = 83/235 (35%), Gaps = 31/235 (13%) Query: 250 KIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGG- 308 ++ + ++ + L + D I ++K + + N ++ E + ++N + G Sbjct: 15 RLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQEYQNKLIYLVPEKQLLNERIKNMQLGN 74 Query: 309 -------FLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKAC 361 L E+ + +++ +E K+ D+ + EL++ Sbjct: 75 TPDLGISLLQKKSLEKEELCQRLKEQLDALEKETASKLSEM-------DSFNNELKELRE 127 Query: 362 AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXX 421 + ++ ++ + + K++E + DEA R+A+ Sbjct: 128 SYNTQQLAIEQLYKIKRDKLREIERKRSELIQKKKLEDEATRKAKQGK------------ 175 Query: 422 XYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 K L + EE +Q +E KAQE Q + + +SE G L Sbjct: 176 ---ENLWKENLRKEEEEKQKRLQEEKAQEKVQ-EVERKAEEKQSEPAGTLVNYRA 226 >gi|72007330|ref|XP_782567.1| PREDICTED: similar to Trichohyalin [Strongylocentrotus purpuratus] Length = 722 Score = 40.6 bits (94), Expect = 0.10 Identities = 40/206 (19%), Positives = 76/206 (36%), Gaps = 18/206 (8%) Query: 216 NHTSELFGF---VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDA--RGKKL--FWKAD 268 EL +K+ + A +A K L +K+ ++ K+L K Sbjct: 388 AKEEELNRHKNKIKEQERIRAEAEKKDAEEKRLAHEKKMKEQAQKKAEHEKRLAHEKKMK 447 Query: 269 ELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENG------EGGFLIAPQDACNEIAE 322 E +K K++ L + Q+ ++ E L A + E A+ Sbjct: 448 EQAQK-KAEQEKRLAQEKKMKEQAQKKAEQERKMKEQAQKKAEEAKRL-AHEKKMKEQAQ 505 Query: 323 VVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELES 382 + +++ + E K + KKA + + KA L E++ K+ ++ E Sbjct: 506 KKAEQEKRLALEKEMKEQAQKKAEQERK-MKEQAQKKAEQAKRLAHEKKMKEQAQKKAEQ 564 Query: 383 IVRLKQAEADMF--QLKADEARREAE 406 RL Q + Q KA++ +R+ E Sbjct: 565 EKRLAQEKKMKEQAQKKAEQEKRDRE 590 >gi|47208995|emb|CAF91401.1| unnamed protein product [Tetraodon nigroviridis] Length = 2819 Score = 40.6 bits (94), Expect = 0.10 Identities = 38/242 (15%), Positives = 84/242 (34%), Gaps = 36/242 (14%) Query: 265 WKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEG----------------- 307 + +E +KL +L + +A + + L+N Sbjct: 1449 EELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALD 1508 Query: 308 -------GFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRM---FKKARSVLDACDRELE 357 L + E ++ + ++ ++ E ++ F+++ L+ RE + Sbjct: 1509 KKQRNFDKILAEWKQKYEESQSELEGSQKEARSLSTELFKLKNSFEESLENLETMKRENK 1568 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ--LKADEARREAEXXXXXXXXX 415 + ++DL + + I ELE I + + E Q L+ EA E E Sbjct: 1569 NLQEELSDLAEQIVEGTKSIHELEKIRKQLEQEKSELQTSLEEAEASLEHEEGKILRIQL 1628 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQY-------LFEELKAQENSQCDFDPMKMRMESEIR 468 + L + E E+ ++ L L+A+ S+ + +K +ME ++ Sbjct: 1629 EFNQIKAEIERKLGEKDEEMEQAKRNQQRIVDSLQSSLEAETRSRNEALRLKKKMEGDLN 1688 Query: 469 GL 470 + Sbjct: 1689 EM 1690 Score = 37.9 bits (87), Expect = 0.67 Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 21/162 (12%) Query: 259 RGKKLFWKADELIEKLKSKLIDPLDACNFIL---MFFQECDSDSPSLENGEGGFLIAPQD 315 R L + +EL L+ A +L Q S + L N + + Sbjct: 2128 RNNLLQAEVEELRASLEQTERSRKLAEQELLDVSERVQLLHSQNTGLINQKKKLEVDASQ 2187 Query: 316 ACNEIAEVVQDTARKME---------VVAEEKMRMFKKARSVLDACDRELEDKAC----- 361 E+ E VQ+ E + E+++ + + L+ + +E Sbjct: 2188 LQMEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHR 2247 Query: 362 --AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA 401 + M+ KK Q+++LE+ VR + E +M Q K+ EA Sbjct: 2248 LDEAEQIAMKGGKK--QVQKLEARVRELENEVEMEQKKSSEA 2287 >gi|68125760|emb|CAJ03563.1| hypothetical protein, conserved [Leishmania major] Length = 1064 Score = 40.6 bits (94), Expect = 0.10 Identities = 51/278 (18%), Positives = 89/278 (32%), Gaps = 46/278 (16%) Query: 216 NHTSELFGFVKDVFQHCAPNW--DFEALIKELDFVRKIFRGSEDA---RGKKLFWKADEL 270 +EL G ++DV Q L++ R + D R L E+ Sbjct: 706 AKCAELQGALEDVLQRAKRQQELSQARLVELEASSRAALVTTRDEAMGRVGALRSSLREI 765 Query: 271 IEKL--KSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTA 328 L KS A + + +E +EN A +QD Sbjct: 766 AASLATKSASETSPAAGHEVAQLREEAGQRERIVENLRSE-----LHALRAAHTELQDDH 820 Query: 329 RKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK- 387 ++ A+ M++ A REL + + +Q + +I+ELE+ V Sbjct: 821 SALQAEAQ----MYRTRLEGDLASSREL------LATARSGQQSAESRIDELEAEVERLR 870 Query: 388 ----------QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE 437 + +L DE + E + ++ L + Sbjct: 871 SAVVASDGCMHTMEERLRLATDELASQQE---------QLDEASTWQARALSAESELGTQ 921 Query: 438 RRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 R Y +E+ + + C M+ R +E+ GLLK E Sbjct: 922 RSYYE-KEIAVYKTAAC---AMQDRHHAEVEGLLKRYE 955 >gi|3252880|gb|AAC24207.1| myosin heavy chain isoform A [Loligo pealei] Length = 1935 Score = 40.6 bits (94), Expect = 0.10 Identities = 45/216 (20%), Positives = 83/216 (38%), Gaps = 27/216 (12%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQE 294 A+ EL+ +R I +E AR K + + S ++ L A + + Sbjct: 1674 ERRCAAINGELEELRTILEQAERAR-KAAENELADA-----SDRVNELQAQVSTVGSQKR 1727 Query: 295 C-DSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMR--MFKKARSVLDA 351 + D ++++ +DA + D R + + +E+ +K R L++ Sbjct: 1728 KLEGDVTAMQSDLDELNNELKDADERAKHAMADATRLADELRQEQDHGLSVEKMRKSLES 1787 Query: 352 CDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXX 411 +EL+ + ++ KK I++LES VR +AE D Q RR AE Sbjct: 1788 QVKELQVRLDESEAAALKGGKKM--IQKLESRVRELEAELDSEQ------RRHAETQKSM 1839 Query: 412 XXXXXXXXXXXYTSKYLKLRLSEAEERRQY-LFEEL 446 + +L + E+R+ Y +EL Sbjct: 1840 RKVD---------RRVKELSFQQEEDRKNYERMQEL 1866 Score = 38.2 bits (88), Expect = 0.46 Identities = 49/224 (21%), Positives = 86/224 (38%), Gaps = 25/224 (11%) Query: 262 KLFWKADELIEKLKSKLIDPLDACNFILMF--FQECDSDSPSLENGEGGFLIAPQDACNE 319 +LF K L+ + + + F M F C+ LE L+ ++ Sbjct: 830 RLFNKVKPLLNIARQEDENKKAQEEFAKMKEEFASCEQMRKELEEQN-TVLMQQKNDLVI 888 Query: 320 IAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK----ACAVTDLKMERQKKKP 375 +D AEEK+ K +S + +ELEDK A T+L +++K Sbjct: 889 AMSSGEDAIGD----AEEKIEQLIKQKSDFETQIKELEDKLMDEEDAATELSAQKKKSDA 944 Query: 376 QIEELESIVRLKQAEADMFQLKADEARREAE----XXXXXXXXXXXXXXXXYTSKYLKLR 431 +I EL+ D+ L+A A+ E E + SK K + Sbjct: 945 EIGELKK---------DVEDLEAGLAKAEQEKTTKDNQIKTLQDEMAQQDEHLSKLNKEK 995 Query: 432 LSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + EE ++ E+L+A+E+ +K ++E + L +E Sbjct: 996 KNL-EEVQKKTLEDLQAEEDKVNHLSKLKTKLEQTLDELEDNLE 1038 Score = 38.2 bits (88), Expect = 0.49 Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 17/147 (11%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 ++L +E L+ + + A I QE D L+ E F + Sbjct: 1537 EELQAALEEAEGALEQEEAKVMRATLEISQIRQEID---RRLQEKEEEF----DNTRRNH 1589 Query: 321 AEVVQDTARKMEVVAEEK---MRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 ++ +E A+ K +R+ KK ++ + L+ +L+ +K + QI Sbjct: 1590 QRAIESMQASLEAEAKGKAEALRIKKKLEGDINELEIALDATNRGKAELEKNVKKYQGQI 1649 Query: 378 EELESIVRLKQAEADMFQLKADEARRE 404 EL+S V + Q + DEA+ Sbjct: 1650 RELQSQV-------EEEQAQRDEAKEH 1669 >gi|2160396|dbj|BAA03407.1| MLL [Homo sapiens] Length = 1909 Score = 40.6 bits (94), Expect = 0.11 Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 22/120 (18%) Query: 125 RCRNIACQNLLPADDCD---------CDICSNKKGFCNLCMCVICSKFDFASNT-CRWIG 174 RC+ +C + P D C C+ F C +C K + + + Sbjct: 1532 RCK--SCGSTTPGKGWDAQWSHDFSLCHDCAKL--FAKGNFCPLCDKCYDDDDYESKMMQ 1587 Query: 175 CDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIAC--NHTSELFGFVKDVFQH 231 C C W H+ C + + + ++ + + + C+ C H +E ++ Q Sbjct: 1588 CGKCDRWVHSKCENLSDEMYEILSNL-----PESVAYTCVNCTERHPAEWRLALEKELQI 1642 >gi|38488753|ref|NP_942118.1| myosin, heavy polypeptide 6, cardiac muscle, alpha [Danio rerio] Length = 1936 Score = 40.6 bits (94), Expect = 0.11 Identities = 42/244 (17%), Positives = 88/244 (36%), Gaps = 32/244 (13%) Query: 265 WKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + ++ +KL KL D +A + + L+N ++ + + A + Sbjct: 1384 EELEDAKKKLVQKLQDAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMLDLERSNAASAALD 1443 Query: 325 QDTARKMEVVAEEKMRM----------FKKARSV-----------------LDACDRELE 357 + +V+AE K + K+ARS+ L+ RE + Sbjct: 1444 KKQRSFDKVMAEWKQKYEESQCELEGAQKEARSLSTELFKLKNSYEETLDHLETIKRENK 1503 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ---LKADEARREAEXXXXXXXX 414 + ++DL + + + + ELE + + + E Q +AD + E Sbjct: 1504 NLQEEISDLTDQVSEGRKSVHELEKLRKQLEQEKTELQSALEEADASVEHEEGKILRAQL 1563 Query: 415 XXXXXXXXYTSKYLKLRLSEAEERR--QYLFEELKAQENSQCDFDPMKMRMESEIRGLLK 472 + K + + RR Q + E L+A ++ +R++ ++ G L Sbjct: 1564 EFNQLKADFERKMSEKDEEMEQARRNYQRMIESLQASLEAETRSRNEALRVKKKMEGDLN 1623 Query: 473 GMEM 476 ME+ Sbjct: 1624 EMEI 1627 >gi|50760637|ref|XP_418091.1| PREDICTED: similar to Glial fibrillary acidic protein, astrocyte (GFAP) [Gallus gallus] Length = 366 Score = 40.2 bits (93), Expect = 0.12 Identities = 48/253 (18%), Positives = 100/253 (39%), Gaps = 29/253 (11%) Query: 233 APNWDFEALIKELDFVRKIFR--GSEDARGK----KLFWKADELIEKLKSKLIDPLDACN 286 P+ + +EL +R+ G+ AR + L + L EKL+ ++ L+A + Sbjct: 98 QPSRLGDVYQEELRELRRRVELLGTAKARAEVQRDGLAEELGSLREKLQQEVNLRLEAES 157 Query: 287 FILMFFQECDSDSPSLENGEGG-FLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + + Q+ D+ + + + E + + A + + + ++ + + Sbjct: 158 TLAAYRQDVDAAALARLDLERRVGSLQDEVAFLQKVHEEELRELQEQLAQHQVHVEVDAS 217 Query: 346 RSVLDACDREL--EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL-KADEAR 402 + L A R++ + +A A ++++ + K + +L AEA +A+E R Sbjct: 218 KPDLTAALRDIRTQYEAMAASNMQETEEWYKSKFADLTDAAAR-HAEALRAAKHEANEYR 276 Query: 403 REAEXXXXXXXXXXXXXXXXYTSKYLKLR-LSEAEERRQYLFEELKAQENSQCDFDPMKM 461 R+ + T LR +E+ ER+ EE A E S + Sbjct: 277 RQLQAL---------------TCDLEALRGSNESLERQLRELEERYALETS--AYQDTVG 319 Query: 462 RMESEIRGLLKGM 474 R+E +I L + M Sbjct: 320 RLEEDIHSLKEEM 332 >gi|422615|pir||A47297 myosin heavy chain form B, nonmuscle - African clawed frog Length = 1992 Score = 40.2 bits (93), Expect = 0.12 Identities = 27/142 (19%), Positives = 55/142 (38%), Gaps = 6/142 (4%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 ++L + EL E L+S+ A +E ++ LE+ A Q+ + Sbjct: 1129 RELQAQIAELQEDLESEKASRNKAEKQKRDLSEELEALKTELEDT-LDTTAAQQELRTKR 1187 Query: 321 AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIE-- 378 + V + + +E ++ R EL ++ K+ +K K +E Sbjct: 1188 EQEVAELRKSIEEETRNHEAQIQEMRQRQATALEELSEQLEQAKRFKVNLEKNKQSLESD 1247 Query: 379 --ELESIVR-LKQAEADMFQLK 397 EL + V+ L+Q +A+ + Sbjct: 1248 NKELATEVKSLQQMKAESEYKR 1269 Score = 37.9 bits (87), Expect = 0.59 Identities = 42/210 (20%), Positives = 80/210 (38%), Gaps = 31/210 (14%) Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAE------VVQDTARKMEVVAEEKMRMFKKA 345 ++ + D LE+ FL + IAE ++ A+ + + ++ M Sbjct: 995 IKKMEEDILVLEDQNSKFLKEKKLLEERIAESTSQLAEEEEKAKNLAKLKNKQEMMISDL 1054 Query: 346 RSVL---DACDRELEDKAC----AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKA 398 L + +ELE TD + + + + QIEEL+ + K+ E L+A Sbjct: 1055 EERLKKEEKTRQELEKAKRKLDGETTDFQDQIAELQAQIEELKLQLAKKEEE-----LQA 1109 Query: 399 DEARREAEXXXXXXXXXXXXXXXXYTSKY------LKLRLSEAEERRQYLFEELKAQENS 452 AR + E ++ K ++AE++++ L EEL+A + Sbjct: 1110 ALARGDEEVLQKNNTLKLVRELQAQIAELQEDLESEKASRNKAEKQKRDLSEELEALKTE 1169 Query: 453 QCDF-------DPMKMRMESEIRGLLKGME 475 D ++ + E E+ L K +E Sbjct: 1170 LEDTLDTTAAQQELRTKREQEVAELRKSIE 1199 >gi|41054798|ref|NP_957334.1| hypothetical protein LOC394015 [Danio rerio] Length = 612 Score = 40.2 bits (93), Expect = 0.12 Identities = 34/191 (17%), Positives = 69/191 (36%), Gaps = 27/191 (14%) Query: 306 EGGFLIAPQDACNEI-AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVT 364 EG + ++ R+ + +++R ++ R + EL +A Sbjct: 311 EGKTSLHKDLKLKRRDQREQREKRREAKEQELQRLRALQEERE-RKMAELELLKEAQRQA 369 Query: 365 DLKME--RQKKKPQIEELESI--VRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXX 420 +E Q+++ Q E+L ++LK+AE ++A+ A +EAE Sbjct: 370 QAMLEQDEQRRRQQHEQLHQALEIQLKEAEEARASMQAEMALKEAEAEKQRTRIRELEAM 429 Query: 421 XXYTS----------------KYLKLRLSEAEERRQYLFEELKAQ-----ENSQCDFDPM 459 +Y + RL EE + L+ + + +Q + + Sbjct: 430 QQRLEDALQQEIKARQDEEAFRYAQARLLAEEEEKMKALMGLREEQEEYIQRAQREKQEL 489 Query: 460 KMRMESEIRGL 470 + MES+ R L Sbjct: 490 RQEMESKSRAL 500 >gi|50838836|ref|NP_001001302.1| myosin, heavy polypeptide 7, cardiac muscle, beta [Gallus gallus] Length = 1931 Score = 40.2 bits (93), Expect = 0.12 Identities = 37/244 (15%), Positives = 82/244 (33%), Gaps = 32/244 (13%) Query: 265 WKADELIEKLKSKLIDPLDA-----------CNFILMFFQECDSDSPSLENGEG------ 307 + +E +KL +L + +A E + +E Sbjct: 1379 EELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMADVERSNAAAAALD 1438 Query: 308 -------GFLIAPQDACNEIAEVVQDTARKMEVVAEE--KMR-MFKKARSVLDACDRELE 357 L + E ++ + ++ ++ E K++ ++++ L+ RE + Sbjct: 1439 KKQRNFDKILSEWKQKFEESQTELEASQKEARSLSTELFKLKNAYEESLEHLETFKRENK 1498 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ--LKADEARREAEXXXXXXXXX 415 + + DL + + I ELE + + AE Q L+ EA E E Sbjct: 1499 NLQEEILDLTEQLGASQKSIHELEKVRKQLDAEKLELQAALEEAEASLEHEEGKILRAQL 1558 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD---FDPMKMRMESEIRGLLK 472 + L + E E+ ++ + + + S +R++ ++ G L Sbjct: 1559 EFNQVKADYERKLAEKDEEIEQSKRNHLRVVDSLQTSLDAETRSRNEALRLKKKMEGDLN 1618 Query: 473 GMEM 476 ME+ Sbjct: 1619 EMEI 1622 >gi|33639477|emb|CAE08861.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB [Synechococcus sp. WH 8102] Length = 900 Score = 40.2 bits (93), Expect = 0.12 Identities = 36/161 (22%), Positives = 53/161 (32%), Gaps = 29/161 (18%) Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ P LE ++ E+ V T ++ R Sbjct: 368 RFQQVLIREPDLE-LSLE-ILRGLRERYELHHGVTITDEAIQTANRLADRYI-------- 417 Query: 351 ACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 DR L DKA A LK+E K +EE E+ +R + + +E R + Sbjct: 418 -SDRCLPDKAIDLIDEAAAQLKIEVTSKPQVVEEAEADLRRVELALLAAEEAPEEERIQL 476 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL 446 + +S+ LR EER Q EEL Sbjct: 477 QRQRLEV-----------SSRLDDLRRRWQEERTQ--LEEL 504 >gi|420071|pir||A43336 microtubule-vesicle linker CLIP-170 - human Length = 1392 Score = 40.2 bits (93), Expect = 0.13 Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 19/171 (11%) Query: 244 ELDFVRKI--FRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPS 301 LD+ +I + +D+ + + L KL I ++ Sbjct: 621 RLDYQHEIENLQNQQDSERAAHAKEMEALRAKL----------MKVIKEKENSLEAIRSK 670 Query: 302 LENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE---EKMRMFKKARSVLDACDRELED 358 L+ E L+ +D N++ E + +++EV+ E+ ++ S L A + +L D Sbjct: 671 LDKAEDQHLVEMEDTLNKLQEA-EIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLD 729 Query: 359 K---ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE 406 A ++ K E +K + Q+E E ++ + E + KA RE + Sbjct: 730 LDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQ 780 >gi|2827709|emb|CAA16682.1| predicted protein [Arabidopsis thaliana] Length = 1421 Score = 40.2 bits (93), Expect = 0.13 Identities = 44/248 (17%), Positives = 93/248 (37%), Gaps = 18/248 (7%) Query: 216 NHTSELFGFV-KDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL 274 + SEL V + + EL+ K + K+ W+ E+ K Sbjct: 369 SKESELIQNVLANQEVILRK--RKSDVEAELECKSKSVE--VEIESKRRAWELREVDIKQ 424 Query: 275 KSKLIDPLD-----ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIA---EVVQD 326 + L+ + + ++ S +L+ E L+A ++ N E ++ Sbjct: 425 REDLVGEKEHDLEVQSRALAEKEKDITEKSFNLDEKE-KNLVATEEDINRKTTMLEDEKE 483 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 RK+++ ++ + + R +D+ ++LE ++L K K ++++L + + Sbjct: 484 RLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSETSELSTLEMKLKEELDDLRA--QK 541 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXY-TSKYLKLRLSEAEERRQYLFEE 445 + A+ +LK ++A+ EAE Y T + + +ER EE Sbjct: 542 LEMLAEADRLKVEKAKFEAEWEHIDVKREELRKEAEYITRQREAFSMYLKDERDNIK-EE 600 Query: 446 LKAQENSQ 453 A N Sbjct: 601 RDALRNQH 608 Score = 38.6 bits (89), Expect = 0.32 Identities = 38/153 (24%), Positives = 58/153 (37%), Gaps = 15/153 (9%) Query: 314 QDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKK 373 Q + ++ R++E E K R L+ R+ E L+ ER + Sbjct: 638 QRERADFLLGIEMQKRELEYCIENK-------REELENSSRDREKAFEQEKKLEEERIQS 690 Query: 374 KPQI--EELESI-VRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL 430 ++ +ELE + V LK+ +A+ ++K D RRE E K Sbjct: 691 LKEMAEKELEHVQVELKRLDAERLEIKLDRERREREWAELKDSVEELKVQR---EKLETQ 747 Query: 431 RLSEAEERRQYL--FEELKAQENSQCDFDPMKM 461 R ER + EELK EN + D M M Sbjct: 748 RHMLRAERDEIRHEIEELKKLENLKVALDDMSM 780 >gi|71018309|ref|XP_759385.1| hypothetical protein UM03238.1 [Ustilago maydis 521] Length = 1121 Score = 40.2 bits (93), Expect = 0.13 Identities = 34/141 (24%), Positives = 52/141 (36%), Gaps = 15/141 (10%) Query: 326 DTARK--MEVVAEEKMRMFKKAR-----SVLDACDRELEDKACAVTDLKMERQKKKPQIE 378 + RK E A+ K++ ++AR + E KA LK E + + E Sbjct: 708 NLRRKAVQEAQAQAKLKADQEARRKAEEEARLKAEEEARLKAEEEARLKAEEEARIKAEE 767 Query: 379 EL----ESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE 434 E E RLK AE + +EAR +AE ++ + + Sbjct: 768 ETRLKAEEEARLK-AEEEARLKAEEEARLKAEEEARLKAEEEARLKAEEEAEAKEAARLK 826 Query: 435 AEERRQYL---FEELKAQENS 452 AEE + E LKA+ S Sbjct: 827 AEEEERLKADEMERLKAEAKS 847 >gi|47230348|emb|CAF99541.1| unnamed protein product [Tetraodon nigroviridis] Length = 533 Score = 40.2 bits (93), Expect = 0.13 Identities = 33/179 (18%), Positives = 66/179 (36%), Gaps = 21/179 (11%) Query: 237 DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIE------KLKSKLIDPLDACNFILM 290 EAL EL + R S +++ + L + K + +L D L N + Sbjct: 269 RIEALEHELSERNGLLRSSSAQDSQQIRQEISNLRQEKDSLLKQRVELDDKLRQGNLL-- 326 Query: 291 FFQECDSDSPSLENGEG-GFLIAPQDACNE-IAEVVQDTARKMEVVAEEKMRMFKK---- 344 + + + E L A + NE I + + ++++ +M + K Sbjct: 327 ---SPEEERTLFQFDEAIEALDAAIEYKNEAITQRQRQLRASASMLSQWEMNLMAKLSYL 383 Query: 345 ARSVLDACDRELEDK----ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD 399 + S A + DK L++ + + Q++E + +V+ + D QL D Sbjct: 384 SASETRALLCKYFDKVVSLREEERKLQLALAELEMQLDEQQRLVQWLENALDRTQLDTD 442 >gi|47205359|emb|CAF96150.1| unnamed protein product [Tetraodon nigroviridis] Length = 1343 Score = 40.2 bits (93), Expect = 0.14 Identities = 42/173 (24%), Positives = 67/173 (38%), Gaps = 24/173 (13%) Query: 324 VQDTARKMEVVAEEKMRMFK-----KARSVLDA--CDRELEDKACAVTDLKMERQKKKPQ 376 ++D +++V +E +R KAR + R+LE+K V+ L +Q Q Sbjct: 1171 LEDQLSELKVKNDENVRQLNDINTQKARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQ 1230 Query: 377 IEEL----ESIVRLKQAEADMFQ-LKAD--------EARREAEXXXXXXXXXXXXXXXXY 423 IEEL E V+ K A A Q + D E +EA+ + Sbjct: 1231 IEELKRHVEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRAMSKANSEVAQW 1290 Query: 424 TSKYLK---LRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 +KY R E EE ++ L + L+ E S K + + L+G Sbjct: 1291 RTKYETDAIQRTEELEEAKKKLAQRLQEAEESIEAV-NSKCASLEKTKQRLQG 1342 >gi|4506751|ref|NP_002947.1| restin isoform a [Homo sapiens] Length = 1427 Score = 40.2 bits (93), Expect = 0.14 Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 19/171 (11%) Query: 244 ELDFVRKI--FRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPS 301 LD+ +I + +D+ + + L KL I ++ Sbjct: 656 RLDYQHEIENLQNQQDSERAAHAKEMEALRAKL----------MKVIKEKENSLEAIRSK 705 Query: 302 LENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE---EKMRMFKKARSVLDACDRELED 358 L+ E L+ +D N++ E + +++EV+ E+ ++ S L A + +L D Sbjct: 706 LDKAEDQHLVEMEDTLNKLQEA-EIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLD 764 Query: 359 K---ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE 406 A ++ K E +K + Q+E E ++ + E + KA RE + Sbjct: 765 LDALRKASSEGKSEMKKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQ 815 >gi|56207208|emb|CAI25143.1| myosin, heavy polypeptide 13, skeletal muscle [Mus musculus] Length = 1938 Score = 39.8 bits (92), Expect = 0.15 Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 41/198 (20%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADE--------------- 269 +K+ L +EL+ ++ +E R D Sbjct: 1671 LKEQLAIV--ERRNGLLQEELEEMKVALEQTERTRRLSEQELLDSSDRVQLLHSQNTSLI 1728 Query: 270 -LIEKLKSKL-IDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 +KL++ L + N I + + A + A + ++ Sbjct: 1729 NTKKKLEADLAQCQAEVENSIQESRNAEEK---------------AKKAITDAAMMAEEL 1773 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ + A RM K L+ ++L+ + L ++ KK QI++LE+ VR Sbjct: 1774 KKEQDTSAHL-ERMKKN----LEQTVKDLQHRLDEAEQLALKGGKK--QIQKLEARVREL 1826 Query: 388 QAEADMFQLKADEARREA 405 ++E D Q + EA + A Sbjct: 1827 ESELDAEQKRGAEALKGA 1844 >gi|13431711|sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle Length = 1935 Score = 39.8 bits (92), Expect = 0.15 Identities = 41/182 (22%), Positives = 70/182 (38%), Gaps = 30/182 (16%) Query: 324 VQDTARKMEVVAEEKMRMFKK---ARSVLD----ACDRELEDKACAVTDLKMERQKKKPQ 376 ++D +++ ++E +R R+ L R+LE+K V+ L +Q Q Sbjct: 1253 LEDQLSEIKTKSDENVRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAYTQQ 1312 Query: 377 IEEL----ESIVRLKQAEADMFQ---------LKADEARREAEXXXXXXXXXXXXXXXXY 423 IEEL E V+ K A A Q + E +EA+ + Sbjct: 1313 IEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRGMSKANSEVAQW 1372 Query: 424 TSKYLK---LRLSEAEERRQYLFEELKAQENSQ-------CDFDPMKMRMESEIRGLLKG 473 +KY R E EE ++ L + L+ E S + K R++ E+ L+ Sbjct: 1373 RTKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQGEVEDLMID 1432 Query: 474 ME 475 +E Sbjct: 1433 VE 1434 >gi|72143373|ref|XP_798142.1| PREDICTED: similar to early endosome antigen 1, partial [Strongylocentrotus purpuratus] Length = 1364 Score = 39.8 bits (92), Expect = 0.16 Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 27/195 (13%) Query: 253 RGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLE-----NGEG 307 + K L K + ++ L+S N I ++ + S ++ N E Sbjct: 575 SSKSEENMKLLEEKLESCLKDLESLKDAVAQKDNLITDLQKDVEERSAEMKRLVDTNHET 634 Query: 308 GFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 + + E+ +D ++ + + ++ + + LE + + Sbjct: 635 ESI---PKDRERLQEMKEDDDTRLASMQGRQDEKEREFLKLKEKMTELLEKSREDANEER 691 Query: 368 MERQKKKPQIEEL--ESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 E+++ + + + E R+++ EA + +L ADE + + E T Sbjct: 692 KEKERIGQEKDSIVMEKDNRIREIEAKIEELMADERKLKEE-----------------TE 734 Query: 426 KYLKLRLSEAEERRQ 440 K K L AEER Q Sbjct: 735 KLAKQLLDGAEERDQ 749 >gi|65305200|emb|CAI73525.1| hypothetical protein [Theileria annulata] Length = 1207 Score = 39.8 bits (92), Expect = 0.17 Identities = 33/176 (18%), Positives = 67/176 (38%), Gaps = 12/176 (6%) Query: 293 QECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDAC 352 QE + E E L + E + Q+ RK+E EK R+ +K R ++ Sbjct: 476 QEQERLRKLEERLEQERLAIEEQERLEKERIEQERIRKLEEQRLEKERLAEKERLDIEEK 535 Query: 353 DRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXX 412 R ++ + + ER KK E + + + + + + + ++ R+E E Sbjct: 536 IRFAQEVQKRLAREETERLKK-------ERLEQERLEKERLEKERLEQQRQEQERLRKLE 588 Query: 413 XXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIR 468 + K R+ E+ R EE + ++ + ++ +E +IR Sbjct: 589 ERLEKERIHEEQERLEKERI---EQERIRKLEEQRLEKERLAE--KERLDIEEKIR 639 Score = 37.9 bits (87), Expect = 0.61 Identities = 34/198 (17%), Positives = 74/198 (37%), Gaps = 12/198 (6%) Query: 271 IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 E+L+ + ++ L ++ LE I + E + Q+ RK Sbjct: 556 KERLEQERLEKERLEKERLEQQRQEQERLRKLEERLEKERIHEEQERLEKERIEQERIRK 615 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 +E EK R+ +K R ++ R ++ + + ER KK E + + + + Sbjct: 616 LEEQRLEKERLAEKERLDIEEKIRFAQEVQKRLAREETERLKK-------ERLEQERLEK 668 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE 450 + + + ++ R+E E + K R+ E+ R EE + ++ Sbjct: 669 ERLEKERLEQQRQEQERLRKLEERLEKERIHEEQERLEKERI---EQERIRKLEEQRLEK 725 Query: 451 NSQCDFDPMKMRMESEIR 468 + ++ +E +IR Sbjct: 726 ERLAE--KERLDIEEKIR 741 >gi|73980499|ref|XP_866328.1| PREDICTED: similar to dynactin 1 isoform 1 isoform 12 [Canis familiaris] Length = 1274 Score = 39.8 bits (92), Expect = 0.18 Identities = 38/240 (15%), Positives = 85/240 (35%), Gaps = 31/240 (12%) Query: 260 GKKLFWKADELIEKLKS-KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN 318 + L + +L EKL++ +L D +E + + Q+ Sbjct: 210 EEGLRAQVRDLEEKLETLRLKRAEDKAK-----LKELEK-HKIQLEQVQEWKSKMQEQQA 263 Query: 319 EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA-----CDRELEDKACAVTDLKMERQKK 373 ++ +++ ++ + E K R ++ DA D+E+ ++ L+ E + Sbjct: 264 DLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAE--SLQQEVEAL 321 Query: 374 KPQIEELESIVRLKQAEAD------------MFQLKADEAR-REAEXXXXXXXXXXXXXX 420 K +++EL + + + +AE + + QL+ AR ++A Sbjct: 322 KERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEH 381 Query: 421 XXYTSKYLK--LRLSEAEERRQYLFEELKAQENSQCDFDPM--KMRMESEIRGLLKGMEM 476 K L ++R+ L EEL E++ + E+ +L + Sbjct: 382 VKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNL 441 >gi|33413782|gb|AAN39444.1| normocyte binding protein 2a [Plasmodium falciparum] Length = 3096 Score = 39.8 bits (92), Expect = 0.18 Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 23/113 (20%) Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 +E+ R+ K+ +R LE + L+ E + K+ + E L+ LK+ E + Sbjct: 2757 RQEQERLQKEEELKRQEQER-LEREKQE--QLQKEEELKRQEQERLQKEEALKRQEQERL 2813 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 Q + + R+E E + + ++ A ER Q++ +L+ Sbjct: 2814 QKEEELKRQEQE-------------------RLERKKIELA-EREQHIKSKLE 2846 >gi|50924660|ref|XP_472685.1| OSJNBa0086B14.27 [Oryza sativa (japonica cultivar-group)] Length = 920 Score = 39.8 bits (92), Expect = 0.18 Identities = 52/224 (23%), Positives = 89/224 (39%), Gaps = 30/224 (13%) Query: 266 KADELIEKLKSKLID-PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNE---IA 321 E + +S+ D L + L Q+ D+ L GF + + E I+ Sbjct: 280 CLKENLASTESEKNDLKLRNEGYTLE-VQKLSKDNKELNELLSGFTVKVTELDKEHTSIS 338 Query: 322 EVVQDTARKMEV----VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 V E V EEKM M K A+ + + + L+ E ++ K +I Sbjct: 339 SHVTQLISSFERYDGKVHEEKMLMIKSAKDKFEHLQNQYVNLISENNALQTEIEELKSRI 398 Query: 378 EEL---ESIVRLKQAEADMFQLKADEARR---EAEXXXXXXXXXXXXXXXXYTSKYLKLR 431 EL + IV ++ E Q+ D+ RR EAE S+ K+ Sbjct: 399 IELQKTQEIVMVQHVEE--CQVAEDKIRRLESEAEISASNI------------SQLEKV- 443 Query: 432 LSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 S+ E R Q L E+ ++ EN + + +++ES+ + LL ++ Sbjct: 444 ASDLEGRVQKLLEDSRSAENHKQELLQKILKLESDNQELLGRVQ 487 >gi|50907355|ref|XP_465166.1| putative guanylate binding protein [Oryza sativa (japonica cultivar-group)] Length = 1082 Score = 39.8 bits (92), Expect = 0.19 Identities = 33/225 (14%), Positives = 75/225 (33%), Gaps = 25/225 (11%) Query: 253 RGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIA 312 A + +E +++L +K+ + + Q + S + + Sbjct: 695 ESGIRAEFASHLEEKEEEMKRLVAKIRHAESEESVLAERLQVAE--SKAQSHN------- 745 Query: 313 PQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQK 372 + + +++ K+E + + + K+AR LE + + + + K Sbjct: 746 --KETAALKDEIRELTGKLEFLRDRAVSFEKQARM--------LEQEKNHLQEKFLSECK 795 Query: 373 KKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYT--SKYLKL 430 K +E E + + EA +D AR EA + + Sbjct: 796 KY---DEAEERYKAAEREAKRATELSDVARTEAVTAQKEKDEAQRLSMEKLAVIERIQRQ 852 Query: 431 RLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + E+ + L +E++ S+ D +ES + K +E Sbjct: 853 -VDRLEQEKVNLLDEVQKMHKSETDALSKVALLESRVAEREKEIE 896 >gi|1490271|emb|CAA93625.1| ALL-1 protein [Homo sapiens] Length = 4005 Score = 39.4 bits (91), Expect = 0.19 Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 25/123 (20%) Query: 125 RCRNIACQNLLPADDCD---------CDICSNKKGFCNLCMCVICSKFDFASNT-CRWIG 174 RC+ +C + P D C C+ F C +C K + + + Sbjct: 1565 RCK--SCGSTTPGKGWDAQWSHDFSLCHDCAKL--FAKGNFCPLCDKCYDDDDYESKMMQ 1620 Query: 175 CDVCSHWCHTDC----AIREGLIKMGHSAKGASGMTEMLFHCIAC--NHTSELFGFVKDV 228 C C W H+ C + + ++ + + + C+ C H +E ++ Sbjct: 1621 CGKCDRWVHSKCENLSGTEDEMYEILSNL-----PESVAYTCVNCTERHPAEWRLALEKE 1675 Query: 229 FQH 231 Q Sbjct: 1676 LQI 1678 >gi|54641700|gb|EAL30450.1| GA21664-PA [Drosophila pseudoobscura] Length = 1341 Score = 39.4 bits (91), Expect = 0.19 Identities = 49/256 (19%), Positives = 83/256 (32%), Gaps = 44/256 (17%) Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L +EL R R ++D K + DE+ E ++ +D A M + + + Sbjct: 418 LQRELQRSRHELREAQDTVSKYKR-ELDEVAESIELLTLDKEMAEER--METLQMELEIA 474 Query: 301 SLENGEGGFLIAPQDACNEIAEVVQD------------TARKMEVVAEEKMRMFKKARSV 348 N E + A E + + E + E+ + R Sbjct: 475 QERNDELSLDVEILKAEQEEQQGQRIEKTEKQAAVGGTPQSAGEFLRLEQYNQ--RLRET 532 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK-----QAEADMFQLKAD-EAR 402 + L + E + K +I EL+SI L E + LK +A Sbjct: 533 VVRLRDTLAQEKQQAQRSHKELETKHSEINELKSIKELLSRRVDHMEVQLMDLKEQVDAS 592 Query: 403 REAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE----ELKAQENSQCDFDP 458 AE ++ L+L E R L E EL+A E Q Sbjct: 593 LGAESMV---------------TQLASLKLEL--EDRVKLLEDEVNELEALEQIQEQLIE 635 Query: 459 MKMRMESEIRGLLKGM 474 +E+++R ++ M Sbjct: 636 SNQELETDLREEIEKM 651 >gi|72016151|ref|XP_781919.1| PREDICTED: similar to CG15792-PA, isoform A [Strongylocentrotus purpuratus] Length = 1059 Score = 39.4 bits (91), Expect = 0.19 Identities = 50/292 (17%), Positives = 97/292 (33%), Gaps = 41/292 (14%) Query: 216 NHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELI---- 271 + + + F H + D K++ +RK+ S K + + Sbjct: 448 SKLDKKLQALSKEFSHAKESRD-----KQISELRKMVEHSSQTTLNGYEKKLHDAVADYE 502 Query: 272 -------EKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAP---QDACNEI- 320 +K S + D L+ N L + + +E+ FLI + ++ Sbjct: 503 QEKFEMQKKQTSAIQDILEDTNDKLQKMEMEY--NAQVESHVSYFLILKYIALEKDYDLK 560 Query: 321 ----AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK----ACAVTDLKMERQK 372 +++ K E E + + L ++E ED+ A+ D ++ RQ+ Sbjct: 561 KIDYERELKNLRGKSEARVEFLKDEHATSLAKLSESNKEFEDRVHELRQALQDSELNRQR 620 Query: 373 KKPQIEELESIVRL------KQAEADMFQLKA--DEARREAEXXXXXXXXXXXXXXXXYT 424 Q+ ELES + + +E + L++ + + E Sbjct: 621 ---QVRELESEYKQDKLHQEQLSERKLQGLRSQMGVEKEDLERQLRQAHNANHDKDEQIK 677 Query: 425 SKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 RL + R + + + NS FD MK +M L K E+ Sbjct: 678 RLKELQRLQAQQAERALEDFKNQVETNSGRMFDDMKTQMARVEVDLTKSKEL 729 >gi|20094208|ref|NP_614055.1| hypothetical protein MK0771 [Methanopyrus kandleri AV19] Length = 609 Score = 39.4 bits (91), Expect = 0.20 Identities = 44/255 (17%), Positives = 85/255 (33%), Gaps = 56/255 (21%) Query: 257 DARGKKLFWKADELIEKLKSKLID------------------PLDACNFILMFFQECDSD 298 A KKL + DE K KS + + + +I + Q + Sbjct: 105 KAENKKLREELDEWRNKAKSAMGERDRLRSEIKRLKEELEKQEKELDKYIKISKQLKEKL 164 Query: 299 SPSL-ENGEGGFLIAPQDACNEIAEVVQD-TARKMEVVAE-------------EKMRMFK 343 + E+ E E + K+E +++ EK K Sbjct: 165 EKAKRESEELKEKAEEYRERYEKIAGKYNELKSKLEDLSDQNRRLAENLKKLKEKYNEIK 224 Query: 344 KARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 + R L +E+ + L+ + ++ K + ++L + V + E + + K D+ + Sbjct: 225 EERDRLKEETKEVGKLKDQLAKLQSKLKEVKSERDDLANEVEALRNENEKLRKKIDKLKS 284 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ---YLFEELKAQENSQCDFDPMK 460 E K LK R + E+ RQ L EE+K ++ + Sbjct: 285 ELSNL----------------QKKLKDREKKLEKARQHIGKLREEIKRRDEEIRKLRKAQ 328 Query: 461 MRMESEIRGLLKGME 475 S+++ +K E Sbjct: 329 ----SKLKDEIKRYE 339 >gi|55639133|ref|XP_522547.1| PREDICTED: restin [Pan troglodytes] Length = 2250 Score = 39.4 bits (91), Expect = 0.21 Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 19/171 (11%) Query: 244 ELDFVRKI--FRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPS 301 LD+ +I + +D+ + + L KL I ++ Sbjct: 682 RLDYQHEIENLQNQQDSERSAHAKEMEALRAKL----------MKVIKEKENSLEAIKSK 731 Query: 302 LENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE---EKMRMFKKARSVLDACDRELED 358 L+ E L+ +D N++ E + +++EV+ E+ ++ S L A + +L D Sbjct: 732 LDKAEDQHLVEMEDTLNKLQEA-EIKVKELEVLQAKCNEQTKVIDNFTSQLKATEEKLLD 790 Query: 359 K---ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE 406 A ++ K E +K + Q+E E ++ + E + KA RE + Sbjct: 791 LDALRKASSEGKSEMEKLRQQLEAAEKQIKHLEIEKNAESSKASSITRELQ 841 >gi|14009350|gb|AAK50339.1| emm type protein precursor [Streptococcus pyogenes] Length = 471 Score = 39.4 bits (91), Expect = 0.21 Identities = 45/247 (18%), Positives = 84/247 (34%), Gaps = 53/247 (21%) Query: 248 VRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQE--CDSDSP----S 301 KI G L K DE ++L +K + + + ++ D + Sbjct: 160 TLKIENGELKTENGDLTKKLDETRQELANKQQESKENEKTLNELLEKTVKDKIAKEQKSK 219 Query: 302 LENGEGGFLIAPQDACNEIAEVVQ-----------DTARKMEVVAEEKMRMFKKARSVLD 350 + G +A ++ N+I++ + + +++E ++ K + + Sbjct: 220 QDFGALEQELAKKEEQNKISDASRQGLRRDLDASREAKKQLEAEHQKLEEQNKISEASRK 279 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-EARREAEXXX 409 R+L+ A L+ E QK + Q K +EA L+ D +A REA+ Sbjct: 280 GLRRDLDASREAKKQLEAEHQKLEEQ---------NKISEASRKGLRRDLDASREAK--- 327 Query: 410 XXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRG 469 K ++ L EA +L A EN + + E E Sbjct: 328 ----------------KQVEKALEEAN-------SKLAALENLNKELEESMKLTEKEKAE 364 Query: 470 LLKGMEM 476 L +E Sbjct: 365 LQAKLEA 371 >gi|73980505|ref|XP_866367.1| PREDICTED: similar to dynactin 1 isoform 1 isoform 14 [Canis familiaris] Length = 1249 Score = 39.4 bits (91), Expect = 0.21 Identities = 38/240 (15%), Positives = 87/240 (36%), Gaps = 31/240 (12%) Query: 260 GKKLFWKADELIEKLKS-KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN 318 + L + +L EKL++ +L D +E + + Q+ Sbjct: 190 EEGLRAQVRDLEEKLETLRLKRAEDKAK-----LKELEK-HKIQLEQVQEWKSKMQEQQA 243 Query: 319 EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA-----CDRELEDKACAVTDLKMERQKK 373 ++ +++ ++ + E K R ++ DA D+E+ ++ L+ E + Sbjct: 244 DLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAE--SLQQEVEAL 301 Query: 374 KPQIEELESIVRLKQAEAD------------MFQLKADEARREAEXXXXXXXXXXXXXXX 421 K +++EL + + + +AE + + QL+ AR + Sbjct: 302 KERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEH 361 Query: 422 XYTSKYLKLRLSEAE---ERRQYLFEELKAQENSQCDFDPM--KMRMESEIRGLLKGMEM 476 K ++ + E E ++R+ L EEL E++ + E+ +L + Sbjct: 362 VKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNL 421 >gi|55741486|ref|NP_999020.1| beta-myosin heavy chain [Sus scrofa] Length = 1935 Score = 39.4 bits (91), Expect = 0.22 Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 32/244 (13%) Query: 265 WKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + +E +KL +L D +A + + L+N ++ + + A + Sbjct: 1384 EELEEAKKKLAQRLQDAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALD 1443 Query: 325 QDTARKMEVVAEEKMRM---------------------------FKKARSVLDACDRELE 357 + +++AE K + ++++ L+ RE + Sbjct: 1444 KKQRNFDKILAEWKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETSKRENK 1503 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ--LKADEARREAEXXXXXXXXX 415 + ++DL + I ELE + + +AE Q L+ EA E E Sbjct: 1504 NLQEEISDLTEQLGSSGKTIHELEKVRKQLEAEKLELQSALEESEASLEHEEGKILRAQL 1563 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD---FDPMKMRMESEIRGLLK 472 + L + E E+ ++ + + + S +R++ ++ G L Sbjct: 1564 EFNQIKAEMERKLAEKDEEMEQAKRNHLRVVDSLQTSLDAETRSRNEALRVKKKMEGDLN 1623 Query: 473 GMEM 476 ME+ Sbjct: 1624 EMEI 1627 >gi|74001604|ref|XP_548735.2| PREDICTED: similar to pericentrin 2 [Canis familiaris] Length = 3147 Score = 39.4 bits (91), Expect = 0.22 Identities = 44/226 (19%), Positives = 85/226 (37%), Gaps = 28/226 (12%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC--- 317 L + + + +L++ L +L Q+ + + ++ ++ Sbjct: 178 ANLQKEKETALTELRAMLNGRHAQELALLRSRQQQELELAREQHAR-----EQEEMRLRC 232 Query: 318 -NEIAEVVQDTARKME--VVAEEKMRMFKKAR--SVLDACDRELEDK-ACAVTDLKMERQ 371 E A++ + +ME A E ++ ++ L+ REL K + +L+ + + Sbjct: 233 SQETAKLKEKLQSEMERNARAVESLKRDWESERGLCLENLRRELSAKHRSELENLQDQFK 292 Query: 372 K-KKPQIEELESIVRLK-QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLK 429 + Q ELE I + K QAE + L+A + E Y Sbjct: 293 RELSEQKAELEKIFQAKNQAECALRTLEA-----QHEEALRQLREDLQSERCQYVQDLE- 346 Query: 430 LRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 LRL + E +Q E L+A + +K + + EIR L +E Sbjct: 347 LRLRDQEVEKQLELESLRA------SYAELKAQSQEEIRRLWSQLE 386 >gi|64085252|ref|NP_689659.2| chromosome 14 open reading frame 145 [Homo sapiens] Length = 1094 Score = 39.4 bits (91), Expect = 0.22 Identities = 40/219 (18%), Positives = 82/219 (37%), Gaps = 21/219 (9%) Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L +EL+ R++ SE +R L +EL +L A + S Sbjct: 284 LEQELELSRRLLNQSEGSRETLLHQ-VEELRTQLTK-------AEGDRKGLQHQVSQISK 335 Query: 301 SLENGEGGFLIAPQDACNEIA--EVVQDTARKMEVVA-EEKMRMFKKARSVLDAC-DREL 356 N + +D QD ++M + + + C +R+ Sbjct: 336 QQSNYQDE---QGEDWRFRRGVEREKQDLEKQMSDLRVQLNFSAMASELEEVKRCMERKD 392 Query: 357 EDKACAVTDLK-MERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXX 415 ++KA + ++ + R+ + + ++L+ + RLK+ + +A+ R+ A+ Sbjct: 393 KEKAHLASQVENLTRELENGEKQQLQMLDRLKEIQNHFDTCEAE--RKHADLQISELTRH 450 Query: 416 XXXXXXXYTSKYLKLRLSEA---EERRQYLFEELKAQEN 451 +L+ SEA E ++ +LKAQE+ Sbjct: 451 AEDATKQAERYLSELQQSEALKEEAEKRREDLKLKAQES 489 >gi|45382045|ref|NP_990066.1| myosin VI [Gallus gallus] Length = 1276 Score = 39.4 bits (91), Expect = 0.22 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 14/142 (9%) Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDAC----NFILMFFQECDSDSPSLENGEGGFLIAP 313 +R KK+ W + + KLK+K+ AC I M+ P ++ + Sbjct: 791 SRWKKVQWCSLS-VIKLKNKIKYRASACIKIQKTIRMWL-CKRKHKPRIDGLIKVRTLKK 848 Query: 314 -QDACNEIAEVVQD-------TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 D NE+ +++ +++E + M K + +E + + Sbjct: 849 RLDKFNEVVSALKEGKAETSKQIKELEYSIDASMTKIKTTMMTREQIMKEYDALVRSSEQ 908 Query: 366 LKMERQKKKPQIEELESIVRLK 387 L QKKK Q EE E + R++ Sbjct: 909 LLSALQKKKQQEEEAERLRRIQ 930 >gi|73980491|ref|XP_866265.1| PREDICTED: similar to dynactin 1 isoform 1 isoform 9 [Canis familiaris] Length = 1202 Score = 39.4 bits (91), Expect = 0.22 Identities = 38/240 (15%), Positives = 87/240 (36%), Gaps = 31/240 (12%) Query: 260 GKKLFWKADELIEKLKS-KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN 318 + L + +L EKL++ +L D +E + + Q+ Sbjct: 197 EEGLRAQVRDLEEKLETLRLKRAEDKAK-----LKELEK-HKIQLEQVQEWKSKMQEQQA 250 Query: 319 EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA-----CDRELEDKACAVTDLKMERQKK 373 ++ +++ ++ + E K R ++ DA D+E+ ++ L+ E + Sbjct: 251 DLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAE--SLQQEVEAL 308 Query: 374 KPQIEELESIVRLKQAEAD------------MFQLKADEARREAEXXXXXXXXXXXXXXX 421 K +++EL + + + +AE + + QL+ AR + Sbjct: 309 KERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEH 368 Query: 422 XYTSKYLKLRLSEAE---ERRQYLFEELKAQENSQCDFDPM--KMRMESEIRGLLKGMEM 476 K ++ + E E ++R+ L EEL E++ + E+ +L + Sbjct: 369 VKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNL 428 >gi|50950115|dbj|BAD34967.1| junction-associated coiled-coil protein [Mus musculus] Length = 1298 Score = 39.4 bits (91), Expect = 0.23 Identities = 54/279 (19%), Positives = 100/279 (35%), Gaps = 31/279 (11%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 ELF + QH D + + E+ + SED L + + + L+ LI Sbjct: 682 ELFQVKMEREQHQTEIRDLQDQLSEMHDELDSTKRSEDREKGALIEELLQAKQDLQDLLI 741 Query: 280 DPLDACNFILMFFQECD------SDSPSLENGEGGFLIAPQDACNEI-AEVVQDTARKME 332 + + + +E + S + E L DA + E V++ + +E Sbjct: 742 AKEEQEDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQAFRESVEEATKNVE 801 Query: 333 VVA-------------EEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEE 379 V+A + + ++ K+ L ELE +A + + + + Q +E Sbjct: 802 VLASRSNSSEQSQAEADLREKVLKEENEKLQGRIAELERRAAQLQRQMEDVKGDEAQAKE 861 Query: 380 L----ESIVRLKQ---AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL 432 ES V+ + A + +A ARR E KLR Sbjct: 862 TLRKCESEVQQLEEALVHARKEEKEATCARRALEKELEQAQRELSQVSQEQKELLEKLR- 920 Query: 433 SEAEERRQYLFEELK-AQENSQCDFDPMKMRMESEIRGL 470 EAE++ Q +LK E+ + D +++ E+ + Sbjct: 921 DEAEQKEQ--LRKLKNEMESERWHLDKTIQKLQKEMADI 957 >gi|47210920|emb|CAG06219.1| unnamed protein product [Tetraodon nigroviridis] Length = 877 Score = 39.4 bits (91), Expect = 0.23 Identities = 34/218 (15%), Positives = 73/218 (33%), Gaps = 30/218 (13%) Query: 253 RGSEDARGKKLFWKADELIEKLKSKLI----DPLDACNFILMFFQECDSDSPSLENGEGG 308 G+ +L + I+ LK +L + C + E +++ + Sbjct: 293 NGTRKDDKARLIEQLTREIQVLKDELESFRLESDQICRALKGRVSELEAELAEQSHLRLQ 352 Query: 309 FLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKM 368 A + + +++ R E E++ R + ++ +KA + Sbjct: 353 A--AGESEFLKA--ELEELRRARE-DTEKEHRSVTE----IEKTTCFQTEKA------QA 397 Query: 369 ERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYL 428 Q+ +LK+ ++ Q AD R+ AE + + Sbjct: 398 NEQRY----------TKLKEKYTELVQSHADLLRKNAEVTRQMTVARAVQDEVDAVRREM 447 Query: 429 KLRLSEAEERRQYL-FEELKAQENSQCDFDPMKMRMES 465 + +L A+ER + E+L + Q + M +ES Sbjct: 448 QGKLRAAQERAEKQAMEQLDQLQELQRELTTRTMELES 485 >gi|48096868|ref|XP_394789.1| PREDICTED: similar to CG9170-PA, isoform A [Apis mellifera] Length = 1382 Score = 39.4 bits (91), Expect = 0.23 Identities = 54/266 (20%), Positives = 96/266 (36%), Gaps = 48/266 (18%) Query: 253 RGSEDARGKKLFWKAD--ELIEKLKSKLIDPL----DACNFILMFFQECDSDSPSLE--- 303 S D F K +L+ K ++ D L ++ D D S Sbjct: 517 ESSLDYTFTNKFNKIKNIDLVSKSETDYSDSEPRRKGKLKVELPRNEQTDDDETSDFSKV 576 Query: 304 NGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAV 363 N E + + ++A E QD +K+E E K ++ ++ + ++A +E +DK + Sbjct: 577 NQETQNI-SRKEANEEATR--QDQCKKLE---EAKAKLSQEHENDIEALRKEYKDKLEQM 630 Query: 364 T-DLKMERQKKKPQI-----EELESIVR-LKQAEADMFQL---KADEARRE------AEX 407 +L+ ++K QI ++LE + R + + E Q + DEA+ E AE Sbjct: 631 KKELEENFAEQKKQIEKNLSDKLEDMRRKMVEKEEREIQKLIAEMDEAKLENLRKVKAEL 690 Query: 408 XXXXXXXXXXXXXXXYTS------KYLKLRLSEA-----------EERRQYLFEELKAQE 450 T + L+LR E +E + E+K + Sbjct: 691 EVCYEKERQEILANLKTELDERKGELLELRNQEMGKLENEHERDLDEEKLAKLSEIKLSK 750 Query: 451 NSQCDFDPMKMRMESEIRGLLKGMEM 476 Q MK ++ E L K + Sbjct: 751 QHQARIKTMKKELDKEFDELRKQLRA 776 >gi|68355944|ref|XP_707480.1| PREDICTED: ventricular myosin heavy chain isoform 3 [Danio rerio] Length = 1843 Score = 39.4 bits (91), Expect = 0.23 Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 21/162 (12%) Query: 259 RGKKLFWKADELIEKLKSKLIDPLDACNFIL---MFFQECDSDSPSLENGEGGFLIAPQD 315 R L + +EL L+ A +L Q S + SL N + Sbjct: 1584 RNNLLQAELEELRAALEQTERGRKLAEQELLDTSERVQLLHSQNTSLLNQKKKLETDISQ 1643 Query: 316 ACNEIAEVVQDTARKME---------VVAEEKMRMFKKARSVLDACDRELEDKAC----- 361 E+ E VQ+ E + E+++ + + L+ + +E Sbjct: 1644 LQTEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHR 1703 Query: 362 --AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA 401 + M+ KK Q+++LE+ VR ++E + Q K+ EA Sbjct: 1704 LDEAEQIAMKGGKK--QVQKLEARVRELESEVESEQKKSSEA 1743 Score = 37.5 bits (86), Expect = 0.83 Identities = 56/303 (18%), Positives = 99/303 (32%), Gaps = 60/303 (19%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLF--WKADELIEKLKSKLIDPL---DACNFIL 289 L +EL+ + + + A ++ K + +KL+ L + +A L Sbjct: 1137 EKQRADLARELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATAATL 1196 Query: 290 MFFQE---CDSDSPSLENGEGGFLIAPQD--ACNEIAEVVQDT---------ARKMEVVA 335 Q + + + E+ +VV + KM Sbjct: 1197 RKKQADSVAELGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEHVVKTKANLEKMTRSL 1256 Query: 336 EEKMRMFKKARSVLDAC------------------DRELEDKACAVTDLKMERQKKKPQI 377 E++M +K C R+LE+K V+ L + QI Sbjct: 1257 EDQMNEYKTKYEEGQRCINDFTMQKSKLQSENGELSRQLEEKDSLVSQLTRSKMSYTQQI 1316 Query: 378 EE----LESIVRLKQAEADMFQL---KADEARR------EAEXXXXXXXXXXXXXXXXYT 424 E+ LE + K A A Q D R EA+ + Sbjct: 1317 EDLKRQLEEETKAKSALAHAVQSARHDTDLLREQYEEEQEAKAELQRGMSKANSEVAQWR 1376 Query: 425 SKYLK---LRLSEAEERRQYLFEELKAQE------NSQC-DFDPMKMRMESEIRGLLKGM 474 +KY R E EE ++ L + L+ E N++C + K R+++EI L+ + Sbjct: 1377 TKYETDAIQRTEELEEAKKKLAQRLQETEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDL 1436 Query: 475 EMT 477 E + Sbjct: 1437 ERS 1439 >gi|71415731|ref|XP_809922.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 670 Score = 39.4 bits (91), Expect = 0.23 Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 20/201 (9%) Query: 271 IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNE-IAEVVQDTAR 329 + KL + +A Q + + + E + E + ++ A+ Sbjct: 81 LRKLTEGQVTEAEAKEEEAKRHQAEEEAAKRHQAEEEAAKRRQAEEEAEKRHQAEEEAAK 140 Query: 330 KMEVVAE-EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQ-KKKPQIEEL--ESIVR 385 K + E E+ R ++ + E E + A + RQ +++ + E + Sbjct: 141 KHQAEEEAERRRQAEEEAEKRRQAEEEAEKRRQAEEEAAKRRQAEEEAEKRHQAEEEAAK 200 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 QAE + + + +A EAE + K R +E E ++ EE Sbjct: 201 RHQAEEEAEKRR--QAEEEAEKRHQAE------------EEAEKRRQAEEEAEKRRQAEE 246 Query: 446 LKAQENSQCDFDPMKMRMESE 466 +A + Q + + K R E Sbjct: 247 -EAAKRHQAEEEAEKRRQAEE 266 >gi|42554130|gb|EAA76973.1| hypothetical protein FG06926.1 [Gibberella zeae PH-1] Length = 2022 Score = 39.4 bits (91), Expect = 0.23 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 4/113 (3%) Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR 346 I Q + L + E+A+ + R+M + E++ R +KA Sbjct: 1885 RIEERRQSKLVGDKEKDATMLAKLREKHEK--EVAKQEEKYRREMRKLEEKRERDQRKAE 1942 Query: 347 SVL-DACDRELEDKAC-AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 A ++E ++K + ++ ER + QIE LE V QA+ M K Sbjct: 1943 ERRRKAAEQEEKNKLSLELERVRAERDVAQRQIELLEGQVGELQAQNTMLVRK 1995 >gi|74002605|ref|XP_848707.1| PREDICTED: similar to myosin, heavy polypeptide 7, cardiac muscle, beta [Canis familiaris] Length = 2106 Score = 39.4 bits (91), Expect = 0.24 Identities = 43/228 (18%), Positives = 84/228 (36%), Gaps = 15/228 (6%) Query: 254 GSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGE------G 307 S KL + DEL L+ + ++ + + S+E+ E Sbjct: 1060 SSLSKAKLKLEQQVDELEGALEQERKARMNCERERSKLEGDFELHRKSMEHLESSQLQLA 1119 Query: 308 GFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 G L + N++ V+ ++ +VA+ + M K+ + + RELE + ++ Sbjct: 1120 GKLSEKELEMNQMNSKVE---KERSLVAQLQ-NMVKELQVQIQGLKRELEVERTTRAKVE 1175 Query: 368 MERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY 427 ER ++E L RL++A ++E + TS Sbjct: 1176 RERANLTQELENLNE--RLEEAGGTSLAQLDITKKQETKFQKLRREMENATLHFETTSAS 1233 Query: 428 LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 LK R +++ Q E L+ + + K ++ E+ LL +E Sbjct: 1234 LKKRHADSLAELQGRLENLQQVKQ---KLEKDKNDLQLEVDDLLTNVE 1278 >gi|73983464|ref|XP_853705.1| PREDICTED: similar to Inner centromere protein isoform 2 [Canis familiaris] Length = 896 Score = 39.4 bits (91), Expect = 0.24 Identities = 35/179 (19%), Positives = 62/179 (34%), Gaps = 38/179 (21%) Query: 303 ENGEGGFLIAPQDA-CNEIAEVVQDTARKMEVV---AEEKMRMFKKARSVLDACDRELED 358 E L ++A +V +D R++E V EE++R +AR ++ E + Sbjct: 536 ERQRLENLRRKEEAELLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKK 595 Query: 359 K---ACAVTDLKMERQK-----------------------KKPQIEELESIVRLKQAEAD 392 + A D K E+ K ++ Q EE+ + RL+Q E + Sbjct: 596 QIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEVRRLRRLQQDEEE 655 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQEN 451 + + ++E E + + R E + Q E K QE Sbjct: 656 RRHQELLQKKKEEEQERLRKVAE--------AKRLAEQREQERQLAEQREQERRKEQER 706 >gi|50949611|emb|CAH10575.1| hypothetical protein [Homo sapiens] Length = 890 Score = 39.0 bits (90), Expect = 0.25 Identities = 38/240 (15%), Positives = 87/240 (36%), Gaps = 31/240 (12%) Query: 260 GKKLFWKADELIEKLKS-KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN 318 + L + +L EKL++ +L D +E + + Q+ Sbjct: 180 EEGLRAQVRDLEEKLETLRLKRAEDKAK-----LKELEK-HKIQLEQVQEWKSKMQEQQA 233 Query: 319 EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA-----CDRELEDKACAVTDLKMERQKK 373 ++ +++ ++ + E K R ++ DA D+E+ ++ L+ E + Sbjct: 234 DLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAE--SLQQEVEAL 291 Query: 374 KPQIEELESIVRLKQAEAD------------MFQLKADEARREAEXXXXXXXXXXXXXXX 421 K +++EL + + + +AE + + QL+ AR + Sbjct: 292 KERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEH 351 Query: 422 XYTSKYLKLRLSEAE---ERRQYLFEELKAQENSQCDFDPM--KMRMESEIRGLLKGMEM 476 K ++ + E E ++R+ L EEL E++ + E+ +L + Sbjct: 352 VKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNL 411 >gi|50757621|ref|XP_415581.1| PREDICTED: similar to fast myosin heavy chain isoform 3 [Gallus gallus] Length = 2041 Score = 39.0 bits (90), Expect = 0.26 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 21/162 (12%) Query: 259 RGKKLFWKADELIEKL-------KSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLI 311 R L + +EL L K + +DA + + + S + + E Sbjct: 1782 RANLLQAEIEELRAALEQTERSRKVAEQELMDASERVQLLHTQNTSLINTKKKLETDIAQ 1841 Query: 312 APQDACNEIAEVVQDTARKMEVVAEEKMR--MFKKARSV----------LDACDRELEDK 359 + + I E + + + + M KK + LD ++L+ + Sbjct: 1842 IQSEMEDTIQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLDQTVKDLQHR 1901 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA 401 L ++ KK QI++LE+ VR + E D Q ++ EA Sbjct: 1902 LDEAEQLALKGGKK--QIQKLEARVRELEGEVDAEQKRSAEA 1941 >gi|9971579|dbj|BAB12571.1| myosin heavy chain [Pennahia argentata] Length = 1930 Score = 39.0 bits (90), Expect = 0.27 Identities = 38/180 (21%), Positives = 68/180 (37%), Gaps = 19/180 (10%) Query: 229 FQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFI 288 Q ++ E++ +R +E +R K + + S+ + L + N Sbjct: 1664 EQAAMVERRNGLMMAEIEELRVALEQTERSR-KVAEQELVDA-----SERVGLLHSQNTS 1717 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 LM L +G Q+A N AE A + E+++ + S Sbjct: 1718 LM--NTKKKLEADLVQIQGEVDDTVQEARN--AEEKAKKAITDAAMMAEELKKEQDTSSH 1773 Query: 349 LDACDRELEDKAC-------AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA 401 L+ + LE +L M+ KK Q+++LES VR +AE + Q + +A Sbjct: 1774 LERMKKNLEVAVKDLQHRLDEAENLAMKGGKK--QLQKLESRVRELEAEVEAEQRRGGDA 1831 >gi|45385726|gb|AAS59740.1| autotransporter adhesin precursor [Actinobacillus actinomycetemcomitans] Length = 912 Score = 39.0 bits (90), Expect = 0.27 Identities = 47/245 (19%), Positives = 84/245 (34%), Gaps = 25/245 (10%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADEL----IEKLKSKLID 280 K+ L E + RK + +E R K E+ ++ K + Sbjct: 195 TKEQLAAQKEAER---LANEQEIARKKIKANELQRAINEQSKLAEVARVKRTLIEQKQVI 251 Query: 281 PLDACNFILMFFQECDSDSP--SLENGEGGFL----------IAPQDACNEIAEVVQDTA 328 + IL Q + +L N E L IA Q A + + Sbjct: 252 SPQKEDEIL-RQQAIEEQRKKEALANAERKRLEAERLAREEEIANQKAEEARKKSEELAR 310 Query: 329 RKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKK--PQIEELESIVRL 386 R+ + +A E+ +KA E + + ++ ER K++ ++ + I R Sbjct: 311 RERDRLAREQEIARQKAAEEERQRAIEAQRQQEENARIERERAKREEADRLAREQEIARQ 370 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEE 445 K E + +A EA+R+ E ++ ++ +A EE RQ E Sbjct: 371 KAVEEER--QRAIEAQRQQEENARIERERVQREEADRLAREQEIARQKAVEEERQRAIET 428 Query: 446 LKAQE 450 + QE Sbjct: 429 QRQQE 433 >gi|39591036|emb|CAE58816.1| Hypothetical protein CBG02025 [Caenorhabditis briggsae] Length = 1964 Score = 39.0 bits (90), Expect = 0.28 Identities = 51/256 (19%), Positives = 82/256 (32%), Gaps = 55/256 (21%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEK-------LKSKLIDPLDACNFILM 290 L KE+ R+ + + + + +EL +K L+ +L + IL Sbjct: 1359 RAHLEKEIHAARQGAGDARRKAEEAVNQQLEELRKKNLRDVEHLQQQLEESEAVKERILQ 1418 Query: 291 F---FQECDSDSPSLENGEGGFLIAPQDACNEI-AEVVQDTARKMEVVAEEKMRMFKKAR 346 Q+ D +A + + +K E E+ +KA Sbjct: 1419 SKKKIQQEFED------------VAMELDNVRASHRDSEKRQKKFETQMAEERAAVQKAL 1466 Query: 347 SVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE-------ADMFQLKAD 399 D+ +EL D+ V L E K Q+EE + I R Q E D F Sbjct: 1467 LDRDSMSQELRDRETRVLSLMNEVDLMKEQLEESDRIRRSLQQELQDSISNKDDFGKNVH 1526 Query: 400 EARR-----EAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-------------------EA 435 E + EAE +LRL EA Sbjct: 1527 ELEKAKRSLEAELADMRAQMEELEDNLQMAED-ARLRLEVTNQALKSESDRAISNKDVEA 1585 Query: 436 EERRQYLFEELKAQEN 451 EE+R+ L ++++ EN Sbjct: 1586 EEKRRGLLKQIRDLEN 1601 >gi|56205922|emb|CAI24424.1| myosin XVIIIa [Mus musculus] Length = 1998 Score = 39.0 bits (90), Expect = 0.29 Identities = 48/277 (17%), Positives = 94/277 (33%), Gaps = 47/277 (16%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 VK + + +ELD E A ++ + ++ +L+ + D A Sbjct: 1536 VKKQLRDL--EAKVKDQEEELD---------EQAGSIQMLEQLKQMEVQLEEEYEDKQKA 1584 Query: 285 --CNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI---------AEVVQDTARKMEV 333 L SD + + E + + + + K E Sbjct: 1585 LREKRELESKLSTLSDQVNQRDFESEKRLRKDLKRTKALLADAQIMLDHLKNNAPSKRE- 1643 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEE-------LESIVRL 386 +A+ K +++ KA +++ME QI++ LE + Sbjct: 1644 IAQLK-NQLEESE-----FTCAAAVKARKAMEVEMEDLHL--QIDDIAKAKTALEEQLSR 1695 Query: 387 KQAEADMFQLKADEARREA-EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 Q E + Q + +E + + E L+ ++ E+ + +Q L E+ Sbjct: 1696 LQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDMAQMNDLQAQIEESNKEKQELQEK 1755 Query: 446 LKAQENSQCDFDPMKM-------RMESEIRGLLKGME 475 L+A + SQ +F M R E++IR L +E Sbjct: 1756 LQALQ-SQVEFLEQSMVDKSLVSRQEAKIRELETRLE 1791 >gi|68355946|ref|XP_707481.1| PREDICTED: ventricular myosin heavy chain isoform 4 [Danio rerio] Length = 1913 Score = 39.0 bits (90), Expect = 0.29 Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 21/162 (12%) Query: 259 RGKKLFWKADELIEKLKSKLIDPLDACNFIL---MFFQECDSDSPSLENGEGGFLIAPQD 315 R L + +EL L+ A +L Q S + SL N + Sbjct: 1654 RNNLLQAELEELRAALEQTERGRKLAEQELLDTSERVQLLHSQNTSLLNQKKKLETDISQ 1713 Query: 316 ACNEIAEVVQDTARKME---------VVAEEKMRMFKKARSVLDACDRELEDKAC----- 361 E+ E VQ+ E + E+++ + + L+ + +E Sbjct: 1714 LQTEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHR 1773 Query: 362 --AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA 401 + M+ KK Q+++LE+ VR ++E + Q K+ EA Sbjct: 1774 LDEAEQIAMKGGKK--QVQKLEARVRELESEVESEQKKSSEA 1813 >gi|62641805|ref|XP_215206.3| PREDICTED: similar to FLJ00354 protein [Rattus norvegicus] Length = 1445 Score = 39.0 bits (90), Expect = 0.30 Identities = 37/222 (16%), Positives = 76/222 (34%), Gaps = 23/222 (10%) Query: 264 FWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV 323 + + +L+ +++ + +++ SL +A E+ Sbjct: 710 EQALRDEVAQLRREVVSLEAKLQAQAQRLEARSAEAVSLSEELAQARRTEAEAHLEVEAR 769 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACD--------RELEDKACAVTDLKMERQKKKP 375 ++ AR E V + + +A S RE L+ + + + Sbjct: 770 AREQARLREAVDAASLEL--EAASREREALAEALAAAGRERRQWEREGPRLRAQVEAAEQ 827 Query: 376 QIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LS 433 Q++ LES VR EA+ L+ R E E + L+ L Sbjct: 828 QVQALESQVRCHLEEAEREHLEKQALREELEKAVVRGQELGD--------RLEHLQRELE 879 Query: 434 EAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 +A RQ +E +E+ + ++ R+E+E++ E Sbjct: 880 QAALERQKFLQE---RESQHQRYQHLEQRLEAELQAASTNKE 918 >gi|70800045|gb|AAZ09886.1| hypothetical protein, conserved [Leishmania major strain Friedlin] Length = 686 Score = 38.6 bits (89), Expect = 0.33 Identities = 36/167 (21%), Positives = 55/167 (32%), Gaps = 18/167 (10%) Query: 316 ACNEIAEVVQ--DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKK 373 A E E + + RK + E K K+ R R E++ A LK +K Sbjct: 286 ASREATEELSPTELRRKAIRMLEAKEAEMKRRREEQLRLLRVREEQLRAEIALK---EKY 342 Query: 374 KPQIEELESIVRLKQAEADM---FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL 430 K EE E R ++AE + D +E + KL Sbjct: 343 KQ--EEAER--RQREAEQKRKDELARRYDALLKEEFTLQSRMREREEMEARQEAERRAKL 398 Query: 431 RLSEAEERR-QYLFEELK-----AQENSQCDFDPMKMRMESEIRGLL 471 AEE + +E + ++E + KMR E +L Sbjct: 399 AQVAAEEEELRRRIQETEDRRKASEEEAARVARDKKMREVREKEEML 445 >gi|437191|gb|AAA50854.1| M5.8193 protein Length = 457 Score = 38.6 bits (89), Expect = 0.34 Identities = 47/242 (19%), Positives = 79/242 (32%), Gaps = 22/242 (9%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD 298 L KEL+ R+ ++ K+ +EL+EK I + + Sbjct: 134 GDLTKELNKTRQEL-ANKQQESKENEKALNELLEKTVKDKIAKEQENKETIGTLK----- 187 Query: 299 SPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED 358 L+ L Q + I + Q+ A+K E K + + R+L+ Sbjct: 188 -KILDETVKDKLAKEQKSKQNIGALKQELAKKDEA--------NKISDASRKGLRRDLDA 238 Query: 359 KACAVTDLKMERQKKKPQ--IEELESIVRLKQAEADMFQLKADEA--RREAEXXXXXXXX 414 A L+ E QK + Q I E + +A K EA ++ E Sbjct: 239 SREAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQLEAEHQKLEEQNKISEAS 298 Query: 415 XXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 S+ K ++ +A E +L A E + + K E E L + Sbjct: 299 RKGLRRDLDASREAKKQVEKALEEAN---SKLAALEKLNKELEESKKLTEKEKAELQAKL 355 Query: 475 EM 476 E Sbjct: 356 EA 357 >gi|68355950|ref|XP_707483.1| PREDICTED: ventricular myosin heavy chain isoform 6 [Danio rerio] Length = 1906 Score = 38.6 bits (89), Expect = 0.34 Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 21/162 (12%) Query: 259 RGKKLFWKADELIEKLKSKLIDPLDACNFIL---MFFQECDSDSPSLENGEGGFLIAPQD 315 R L + +EL L+ A +L Q S + SL N + Sbjct: 1647 RNNLLQAELEELRAALEQTERGRKLAEQELLDTSERVQLLHSQNTSLLNQKKKLETDISQ 1706 Query: 316 ACNEIAEVVQDTARKME---------VVAEEKMRMFKKARSVLDACDRELEDKAC----- 361 E+ E VQ+ E + E+++ + + L+ + +E Sbjct: 1707 LQTEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHR 1766 Query: 362 --AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA 401 + M+ KK Q+++LE+ VR ++E + Q K+ EA Sbjct: 1767 LDEAEQIAMKGGKK--QVQKLEARVRELESEVESEQKKSSEA 1806 >gi|27529702|dbj|BAA13206.2| KIAA0216 [Homo sapiens] Length = 2067 Score = 38.6 bits (89), Expect = 0.34 Identities = 42/259 (16%), Positives = 90/259 (34%), Gaps = 48/259 (18%) Query: 256 EDARGKKLFW---KADELIEK-------LKSKLIDPLDACNFILMFFQECDSDSPSLENG 305 K++ + +E + ++ +L + + +L +E + +L + Sbjct: 1596 RQTHSKEMESRDEEVEEARQSCQKKLKQMEVQLEEEYEDKQKVLREKRELEGKLATLSDQ 1655 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRM--------FKKARSVLDACDRELE 357 + +D R ++A+ ++ + K+ + L E E Sbjct: 1656 VNRRDFESEKRLR------KDLKRTKALLADAQLMLDHLKNSAPSKREIAQLKNQLEESE 1709 Query: 358 ------DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEA--RREAEXXX 409 KA +++E + QI+++ + + Q + +E R E + Sbjct: 1710 FTCAAAVKARKA--MEVEIEDLHLQIDDIAKAKTALEEQLSRLQREKNEIQNRLEEDQED 1767 Query: 410 XXXXXXXXXXXXXYTSKYLKL------RLSEAEERRQYLFEELKAQENSQCDFDPMKM-- 461 S+ L +L EA + +Q L E+L+A + SQ +F M Sbjct: 1768 MNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEKQELQEKLQALQ-SQVEFLEQSMVD 1826 Query: 462 -----RMESEIRGLLKGME 475 R E++IR L +E Sbjct: 1827 KSLVSRQEAKIRELETRLE 1845 >gi|71533417|gb|AAZ32811.1| Hypothetical protein F23F12.8 [Caenorhabditis elegans] Length = 980 Score = 38.6 bits (89), Expect = 0.34 Identities = 40/227 (17%), Positives = 82/227 (36%), Gaps = 39/227 (17%) Query: 286 NFILMFFQEC-----DSDSPSLENGEGGFLIAPQDACNEIAEVVQ-DTARKMEVVAEEKM 339 + Q+ + + E E + + E Q + R+ + AE++ Sbjct: 306 KTVSERQQQEKFEKMEQERLRQEKEEKARELERRRKLEESETARQAELDRQATIYAEQER 365 Query: 340 RMFKK----ARSVLDACDRELED-----------KACAVTDLKMERQKKKPQIE------ 378 ++ R L+ RE E K + L++ERQ+K ++ Sbjct: 366 MAMERNRELERIRLEEKKRENERVRQEEIAMEISKIRELERLQLERQRKNERVRQELEAA 425 Query: 379 ------ELESIVRLKQAEADMFQLK-ADEARRE----AEXXXXXXXXXXXXXXXXYTSKY 427 E E +++Q + +M Q++ +EAR+E E + Sbjct: 426 RKYKLQEEERQRKIQQQKVEMEQIRQQEEARQEQLRVLEEERARELERVRQEELERQHQM 485 Query: 428 LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 LR E E++++ E+ + Q Q + +M +E E++ + M Sbjct: 486 EILRQQE-EDQKKKKLEKDREQREQQEAEELNRMIIEKEMKENKQKM 531 >gi|68364800|ref|XP_692069.1| PREDICTED: similar to desmoplakin isoform I [Danio rerio] Length = 1783 Score = 38.6 bits (89), Expect = 0.35 Identities = 34/163 (20%), Positives = 72/163 (44%), Gaps = 9/163 (5%) Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFK---KARSVLDACDRELEDKACAVTDLKME----R 370 E E ++ +++E + KM + K + L+ +ELED+A + + + E R Sbjct: 347 EEHDETMRKKLKELEQASWAKMELEKTVSERNRELERLRKELEDEARRIKEAQTELAKVR 406 Query: 371 QKKKPQIEELESIV--RLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYL 428 Q+ +I E++ ++ A++ M +L ++ A K L Sbjct: 407 QEHSTEIREVKQTYESQILVAQSSMQKLSQEKESDSAAMSLEFERLEGESSELKEQLKRL 466 Query: 429 KLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLL 471 ++ LS+ E +R+ L EE+K + + +ES+I+ ++ Sbjct: 467 RISLSQEEAQRRILEEEVKRLTALNTEESRKRHELESQIQVMM 509 Score = 37.9 bits (87), Expect = 0.62 Identities = 27/181 (14%), Positives = 62/181 (34%), Gaps = 10/181 (5%) Query: 272 EKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTAR-- 329 E+L+ + + + + + + ++ LE E L A + ++ + Sbjct: 450 ERLEGESSELKEQLKRLRISLSQEEAQRRILEE-EVKRLTALNTEESRKRHELESQIQVM 508 Query: 330 -KMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQ 388 + + KMR +++ S R L+DK + L ++++ LE+ R + Sbjct: 509 MSQKREGDNKMREVQESSS------RTLQDKINEINRLTRNFEEERRLKRSLETDKRRLE 562 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 + + + K + E K R + R Q +EL+ Sbjct: 563 GDLAVLKSKNETTNEELVQLRSSHRELSLIRVELEAHALEKGRSEQTIARLQARIQELQE 622 Query: 449 Q 449 + Sbjct: 623 E 623 >gi|40882180|emb|CAF06006.1| hypothetical protein [Neurospora crassa] Length = 1019 Score = 38.6 bits (89), Expect = 0.35 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 25/135 (18%) Query: 330 KMEVVAEEKMRMFKKARSVLDACDRELED---KACAVTDLKMERQ---------KKKPQI 377 + E EK + K+ R D +RE ++ KA +K R+ KK+ + Sbjct: 199 ERERKRLEKDKKDKEEREKRDKAEREKKEQAAKAQQEAKVKAAREAQERAEREVKKRARD 258 Query: 378 EELESIVRLKQAE--ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-LSE 434 EE + L++AE A + + ++++ARR+AE K + R E Sbjct: 259 EEDQKQAELERAERNARLNRERSEDARRQAEQKHAAEA----------ARKKEEQRQARE 308 Query: 435 AEERRQYLFEELKAQ 449 A E EE K Q Sbjct: 309 ASEAEMASLEEAKRQ 323 >gi|7209643|dbj|BAA92289.1| myosin heavy chain [Seriola dumerili] Length = 1938 Score = 38.6 bits (89), Expect = 0.35 Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 30/182 (16%) Query: 324 VQDTARKMEVVAEEKMRMFK-----KARSVLDA--CDRELEDKACAVTDLKMERQKKKPQ 376 ++D +++ +E +R KAR + R+LE+K V+ L +Q Q Sbjct: 1256 LEDQLSELKAKNDENVRQLNDINAHKARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQ 1315 Query: 377 IEEL----ESIVRLKQAEADMFQ---------LKADEARREAEXXXXXXXXXXXXXXXXY 423 IEEL E V+ K A A Q + E +EA+ + Sbjct: 1316 IEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQW 1375 Query: 424 TSKYLK---LRLSEAEERRQYLFEELKAQENSQ-------CDFDPMKMRMESEIRGLLKG 473 +KY R E EE ++ L + L+ E S + K R++ E+ L+ Sbjct: 1376 RTKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQGEVEDLMID 1435 Query: 474 ME 475 +E Sbjct: 1436 VE 1437 >gi|74186149|dbj|BAE34241.1| unnamed protein product [Mus musculus] Length = 1243 Score = 38.6 bits (89), Expect = 0.35 Identities = 38/240 (15%), Positives = 87/240 (36%), Gaps = 31/240 (12%) Query: 260 GKKLFWKADELIEKLKS-KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN 318 + L + +L EKL++ +L D +E + + Q+ Sbjct: 217 EEGLRAQVRDLEEKLETLRLKRSEDKAK-----LKELEK-HKIQLEQVQEWKSKMQEQQA 270 Query: 319 EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA-----CDRELEDKACAVTDLKMERQKK 373 ++ +++ ++ + E K R ++ DA D+E+ ++ L+ E + Sbjct: 271 DLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAE--SLQQEVEAL 328 Query: 374 KPQIEELESIVRLKQAEAD------------MFQLKADEARREAEXXXXXXXXXXXXXXX 421 K +++EL + + + +AE + + QL+ AR + Sbjct: 329 KERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEH 388 Query: 422 XYTSKYLKLRLSEAE---ERRQYLFEELKAQENSQCDFDPM--KMRMESEIRGLLKGMEM 476 K ++ + E E ++R+ L EEL E++ + E+ +L + Sbjct: 389 VKLQKLMEKKNQELEVVWQQRERLQEELSQAESTIDELKEQVDAALGAEEMVEMLTDRNL 448 >gi|39971187|ref|XP_366984.1| hypothetical protein MG03060.4 [Magnaporthe grisea 70-15] Length = 2403 Score = 38.6 bits (89), Expect = 0.36 Identities = 44/237 (18%), Positives = 85/237 (35%), Gaps = 60/237 (25%) Query: 257 DARGKKLFWKADEL--IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQ 314 R L + E+ + +S + L I M + + EG L Q Sbjct: 1053 GDRLSSLEKEMKEMSQRQSQRSAEEEALQDE--IKMLQSQLSLKDRKARDLEGKLLKIDQ 1110 Query: 315 DACNEIAEVVQDTA----RKMEVVAEEKMRMFKKARSVLDACDRE--LEDKACAVTDLK- 367 DA ++ ++ R+ ++AE + + ++ + D E + K + L+ Sbjct: 1111 DAEVKLVAAQKELQTFKSREQRLIAENRDAQQQLSKLSKTSTDYEDLVRKKESELALLRS 1170 Query: 368 -----------MERQKKKPQIEELESIVRLKQAEADM---------FQLKADEARREAEX 407 E QKK E+ ++ RL++ +A++ Q +AD+A+ Sbjct: 1171 DNKKYETEHRSFEEQKKTLAAEKEKAATRLREVQAEISALKSQQSQLQREADDAK----- 1225 Query: 408 XXXXXXXXXXXXXXXYTSKYLKLRLSE---AEERRQYLFEELKAQENSQCDFDPMKM 461 K L+ RLSE A++ RQ L ++K + + +M Sbjct: 1226 ------------------KLLQARLSEDAQADQNRQVLEGQIKDLK---DELYKTQM 1261 >gi|21674524|ref|NP_662589.1| Smc family protein [Chlorobium tepidum TLS] Length = 1183 Score = 38.6 bits (89), Expect = 0.36 Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 52/227 (22%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQEC-- 295 E+ +++L+ RK+ A +K +++L+ L+ +L+ + +L + Sbjct: 270 QESELRQLELERKL------ADAQKELNASNQLVHTLEKQLLQHKEKQKNLLQTIERLNY 323 Query: 296 ---DSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDAC 352 D LE +E +Q+ E + + S LDA Sbjct: 324 SIADKGRKRLEQEALS------KELSEKQTPLQEVCTAQLAEFERLKKQEVELNSALDAS 377 Query: 353 DRELEDKACAVTDLK-------MERQKKKPQIEELESIVRLKQAEADMFQLKADEAR--R 403 + L+ + AV +L+ + RQ + + E LE V Q K D R Sbjct: 378 RQALQSERRAVAELQKSLNALNLTRQSLRTRKEHLEGSVNRLD------QRKRDLERSME 431 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE 450 +AE + R SEA E ++ +ELK +E Sbjct: 432 QAEP--------------------ERRRTSEAIEEKKIALDELKKEE 458 >SMC_N_Q8KBS6_2-1167_PF02463.7 Length = 1166 Score = 38.6 bits (89), Expect = 0.37 Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 52/227 (22%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQEC-- 295 E+ +++L+ RK+ A +K +++L+ L+ +L+ + +L + Sbjct: 269 QESELRQLELERKL------ADAQKELNASNQLVHTLEKQLLQHKEKQKNLLQTIERLNY 322 Query: 296 ---DSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDAC 352 D LE +E +Q+ E + + S LDA Sbjct: 323 SIADKGRKRLEQEALS------KELSEKQTPLQEVCTAQLAEFERLKKQEVELNSALDAS 376 Query: 353 DRELEDKACAVTDLK-------MERQKKKPQIEELESIVRLKQAEADMFQLKADEAR--R 403 + L+ + AV +L+ + RQ + + E LE V Q K D R Sbjct: 377 RQALQSERRAVAELQKSLNALNLTRQSLRTRKEHLEGSVNRLD------QRKRDLERSME 430 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE 450 +AE + R SEA E ++ +ELK +E Sbjct: 431 QAEP--------------------ERRRTSEAIEEKKIALDELKKEE 457 >gi|127774|sp|P08799|MYS2_DICDI Myosin II heavy chain, non muscle Length = 2116 Score = 38.6 bits (89), Expect = 0.37 Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 18/178 (10%) Query: 240 ALIKELDFVRKIFRGSEDARG------KKLFWKADELIEK--LKSKLIDPLDACNFILMF 291 AL EL+ VR ED+R ++L + +++ +K + + LD L Sbjct: 1703 ALEVELEEVRDQLEEEEDSRSELEDSKRRLTTEVEDIKKKYDAEVEQNTKLDEAKKKLT- 1761 Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFK---KARSV 348 + D+ LE+ E L + A + +D K++ + + R K K Sbjct: 1762 -DDVDTLKKQLED-EKKKLNESERAKKRLESENEDFLAKLDAEVKNRSRAEKDRKKYEKD 1819 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE 406 L +L D+A T ++ K + QI+EL S + +QA+A +AD++++ E Sbjct: 1820 LKDTKYKLNDEAATKTQTEIGAAKLEDQIDELRSKLEQEQAKAT----QADKSKKTLE 1873 >gi|55634519|ref|XP_508031.1| PREDICTED: chondroitin sulfate proteoglycan 6 (bamacan) [Pan troglodytes] Length = 1657 Score = 38.6 bits (89), Expect = 0.38 Identities = 45/280 (16%), Positives = 98/280 (35%), Gaps = 41/280 (14%) Query: 210 FHCIACNHTSELFGFVKDV-FQHCAPNWDFEALIKELDFVRKIFRGSEDARGK--KLFWK 266 ++ + +++ + + + + + +E R K +L Sbjct: 293 YYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKY 352 Query: 267 ADELIEKLKSKLIDPLDACNFILM-------FFQEC---------DSDSPSLENGEGGFL 310 +E + L+ + + + M + + + + +GE Sbjct: 353 IEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQ 412 Query: 311 I--APQDAC---NEIAEVVQDTARKMEVVAEEKMR------MFKKARSVLDACDRELEDK 359 + A QDA +I V++ K+ + EEK + K R+ L+ ++L+D+ Sbjct: 413 LRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDE 472 Query: 360 ----ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXX 415 + L ERQK +IEE KQ E + K + + + E Sbjct: 473 LAGNSEQRKRLLKERQKLLEKIEE-------KQKELAETEPKFNSVKEKEERGIARLAQA 525 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD 455 Y + + + EER +++ +ELK+ + + D Sbjct: 526 TQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAIND 565 >gi|28972187|dbj|BAC65547.1| mKIAA0378 protein [Mus musculus] Length = 632 Score = 38.6 bits (89), Expect = 0.41 Identities = 38/223 (17%), Positives = 76/223 (34%), Gaps = 29/223 (13%) Query: 264 FWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV 323 K + L +K+++ D + S N A + E Sbjct: 213 ERKINVLQKKIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNT--------DTALATLEEA 264 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELE-- 381 + + R +E + E++ R ++ +++ +E +D V L+ E +K+ + +L+ Sbjct: 265 LSEKERIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNALQAELTEKESSLIDLKEH 324 Query: 382 ----------SIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR 431 +LK E + Q K + + EA+ + + +L Sbjct: 325 ASSLASAGLKRDSKLKSLEIAIEQKKEECNKLEAQLKKAHNIEDDSRMNPEFADRLKQLD 384 Query: 432 LS---------EAEERRQYLFEELKAQENSQCDFDPMKMRMES 465 +A+ L E LK EN + D D +ES Sbjct: 385 KEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELES 427 >gi|73998561|ref|XP_851818.1| PREDICTED: similar to Structural maintenance of chromosome 3 (Chondroitin sulfate proteoglycan 6) (Chromosome-associated polypeptide) (hCAP) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) isoform 2 [Canis familiaris] Length = 1228 Score = 38.2 bits (88), Expect = 0.42 Identities = 45/280 (16%), Positives = 98/280 (35%), Gaps = 41/280 (14%) Query: 210 FHCIACNHTSELFGFVKDV-FQHCAPNWDFEALIKELDFVRKIFRGSEDARGK--KLFWK 266 ++ + +++ + + + + + +E R K +L Sbjct: 136 YYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKY 195 Query: 267 ADELIEKLKSKLIDPLDACNFILM-------FFQEC---------DSDSPSLENGEGGFL 310 +E + L+ + + + M + + + + +GE Sbjct: 196 IEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQ 255 Query: 311 I--APQDAC---NEIAEVVQDTARKMEVVAEEKMR------MFKKARSVLDACDRELEDK 359 + A QDA +I V++ K+ + EEK + K R+ L+ ++L+D+ Sbjct: 256 LRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDE 315 Query: 360 ----ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXX 415 + L ERQK +IEE KQ E + K + + + E Sbjct: 316 LAGNSEQRKRLLKERQKLLEKIEE-------KQKELAETEPKFNSVKEKEERGIARLAQA 368 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD 455 Y + + + EER +++ +ELK+ + + D Sbjct: 369 TQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAIND 408 >gi|51764831|ref|XP_110671.3| PREDICTED: myeloid/lymphoid or mixed-lineage leukemia [Mus musculus] Length = 3897 Score = 38.2 bits (88), Expect = 0.42 Identities = 27/140 (19%), Positives = 44/140 (31%), Gaps = 37/140 (26%) Query: 125 RCRNIACQNLLPADDCD---------CDICSNKKGFCNLCMCVICSKFDFASNT-CRWIG 174 RC+ +C + P D C C+ F C +C K + + + Sbjct: 1462 RCK--SCGSTTPGKGWDAQWSHDFSLCHDCAKL--FAKGNFCPLCDKCYDDDDYESKMMQ 1517 Query: 175 CDVCSHWCHTDC----AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQ 230 C C W H+ C + + ++ + + + C+ C Sbjct: 1518 CGKCDRWVHSKCESLSGTEDEMYEILSNL-----PESVAYTCVNCTER------------ 1560 Query: 231 HCAPNWDFEALIKELDFVRK 250 H A W AL KEL K Sbjct: 1561 HPAE-WRL-ALEKELQASLK 1578 >gi|72385522|ref|XP_846428.1| hypothetical protein Tb927.1.3940 [Trypanosoma brucei] Length = 912 Score = 38.2 bits (88), Expect = 0.44 Identities = 42/235 (17%), Positives = 89/235 (37%), Gaps = 45/235 (19%) Query: 264 FWKADELIEKLKSKLIDPLDACNFI----------LMFFQECDSDSPSLEN-GEGGFLIA 312 + + KL+ + + + + QEC + + E Sbjct: 206 EAELQRALSKLEGRFDETAAETRRLELLNESLRDRVGEMQECVQREAEMRHRLEAARGTQ 265 Query: 313 PQD-----ACNEIAE-VVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAV--- 363 Q+ C E+ ++ + +E E ++R K++ +L+ R E+++C Sbjct: 266 QQENKLLSECMELERRGRREQQKAIEGGYEAQLREMKRSYELLERERRRQEEESCRALRE 325 Query: 364 TDL--KMERQKKKPQIEELESIVRLKQAEADMFQLK---ADEARREAEXXXXXXXXXXXX 418 + L ++ R + Q + LE + + E D +L+ DE ++ AE Sbjct: 326 SRLATQLARDEWLAQQQHLELTISGLRGEVDRGRLRFDQVDELKQRAE------------ 373 Query: 419 XXXXYTSKYLK-LR-LSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLL 471 S+ L+ R L ++R L E ++ + + ++R+E EI+ LL Sbjct: 374 ------SELLRAQRELQFVQQRETTLQETVETLQGTVARHRATEVRLEGEIQRLL 422 >SMC_N_Q803N2_2-1196_PF02463.7 Length = 1195 Score = 38.2 bits (88), Expect = 0.46 Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 41/280 (14%) Query: 210 FHCIACNHTSELFGFVKDV-FQHCAPNWDFEALIKELDFVRKIFRGSEDARGK--KLFWK 266 ++ + +++ + + + + + +E R K +L Sbjct: 135 YYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKY 194 Query: 267 ADELIEKLKSKLIDPLDACNFILMFF--------QECDSDSPSLENGEGGFLI------- 311 +E + L+ + + + M QE + L+ Sbjct: 195 IEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSSKRETCGDKSRQ 254 Query: 312 ---APQDACNEIAE---VVQDTARKMEVVAEEKMR------MFKKARSVLDACDRELEDK 359 A QDA +++ E VV++ ++ + EEK + K R+ L+ ++L+D+ Sbjct: 255 LRDAQQDARDKVEETERVVRELKSRISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDE 314 Query: 360 ----ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXX 415 + L ERQK +IEE KQ E + K + + + E Sbjct: 315 LAGNSEQRKRLLKERQKLLEKIEE-------KQKELQETEPKFNTVKEKEERGIARLAQA 367 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD 455 Y + + + EER +++ +ELK+ + + D Sbjct: 368 TQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAIND 407 >gi|63476017|ref|XP_355224.3| PREDICTED: similar to Crocc protein [Mus musculus] Length = 1965 Score = 38.2 bits (88), Expect = 0.47 Identities = 40/175 (22%), Positives = 67/175 (38%), Gaps = 25/175 (14%) Query: 243 KELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP--LDACNF-----ILMFFQEC 295 + L +R+ + SE++R L +A L+ ++ + L N I QE Sbjct: 1421 ERLAELRQELQASEESRE-GLQREALGARRALEDEVQEKDVLQHSNTELRASIHRAEQEK 1479 Query: 296 DSDSPSLENGEGGFLI-------APQDA------CNEIAEVVQDTARKMEVVAEEKMRMF 342 S S E E L+ A ++A E+ +DT RK+ +E+ R Sbjct: 1480 ASLKRSKEEQEQKLLLLQEAQVAAQKEAYELRTRLQELERAQRDTRRKL----QERHRQV 1535 Query: 343 KKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 + + +E+ D V+ RQK + EL+ V QA D Q + Sbjct: 1536 RTLEAENQRKRQEVSDLQAQVSRDAQHRQKNLQESLELQRQVAEAQAAHDGVQKE 1590 >gi|3168846|gb|AAC17738.1| 195 kDa cornified envelope precursor [Homo sapiens] Length = 1756 Score = 38.2 bits (88), Expect = 0.48 Identities = 21/137 (15%), Positives = 47/137 (34%), Gaps = 11/137 (8%) Query: 256 EDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQD 315 E R + L + + L KL + L +L + + E + Sbjct: 1469 EQHRRQLLEGELETLRRKL-AALEKAEVKEKVVLSESVQVEKGDTEQEIQRLKSSLE--- 1524 Query: 316 ACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKP 375 E + ++ ++ + E ++ + S +EL+ L++ERQ + Sbjct: 1525 ---EESRSKRELDVEVSRL-EARLSELEFHNS---KSSKELDFLREENHKLQLERQNLQL 1577 Query: 376 QIEELESIVRLKQAEAD 392 + L+S + + E Sbjct: 1578 ETRRLQSEINMAATETR 1594 >gi|38177589|gb|AAF00096.2| ventricular myosin heavy chain [Danio rerio] Length = 1938 Score = 38.2 bits (88), Expect = 0.48 Identities = 57/303 (18%), Positives = 99/303 (32%), Gaps = 60/303 (19%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLF--WKADELIEKLKSKLIDPL---DACNFIL 289 L +EL+ V + + A ++ K + +KL+ L + +A L Sbjct: 1135 EKQRADLARELEEVSERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATAATL 1194 Query: 290 MFFQE---CDSDSPSLENGEGGFLIAPQD--ACNEIAEVVQDT---------ARKMEVVA 335 Q + + + E+ +VV + KM Sbjct: 1195 RKKQADSVAELGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEHVVKTKANLEKMTRSL 1254 Query: 336 EEKMRMFKKARSVLDAC------------------DRELEDKACAVTDLKMERQKKKPQI 377 E++M +K C R+LE+K V+ L + QI Sbjct: 1255 EDQMNEYKTKYEEGQRCINDFTMQKSKLQSENGELSRQLEEKDSLVSQLTRSKMPYTQQI 1314 Query: 378 EE----LESIVRLKQAEADMFQL---KADEARR------EAEXXXXXXXXXXXXXXXXYT 424 E+ LE + K A A Q D R EA+ + Sbjct: 1315 EDLKRQLEEETKAKSALAHAVQSARHDTDLLREQYEEEQEAKAELQRGMSKANSEVAQWR 1374 Query: 425 SKYLK---LRLSEAEERRQYLFEELKAQE------NSQC-DFDPMKMRMESEIRGLLKGM 474 +KY R E EE ++ L + L+ E N++C + K R+++EI L+ + Sbjct: 1375 TKYETDAIQRTEELEEAKKKLAQRLQETEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDL 1434 Query: 475 EMT 477 E + Sbjct: 1435 ERS 1437 >gi|47208510|emb|CAF96455.1| unnamed protein product [Tetraodon nigroviridis] Length = 1834 Score = 38.2 bits (88), Expect = 0.49 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 30/182 (16%) Query: 324 VQDTARKMEVVAEEKMRMFKK---ARSVLD----ACDRELEDKACAVTDLKMERQKKKPQ 376 ++D +++ +E +R R+ L R+LE+K V+ L +Q Q Sbjct: 1113 LEDQLSELKAKNDENVRQLNDINAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQ 1172 Query: 377 IEEL----ESIVRLKQAEADMFQ---------LKADEARREAEXXXXXXXXXXXXXXXXY 423 IEEL E V+ K A A Q + E +EA+ + Sbjct: 1173 IEELKRHVEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRAMSKANSEVAQW 1232 Query: 424 TSKYLK---LRLSEAEERRQYLFEELKAQENSQ-------CDFDPMKMRMESEIRGLLKG 473 +KY R E EE ++ L + L+ E S + K R++ E+ L+ Sbjct: 1233 RTKYETDAIQRTEELEEAKKKLAQRLQEAEESIEAVNSKCASLEKTKQRLQGEVEDLMID 1292 Query: 474 ME 475 +E Sbjct: 1293 VE 1294 >gi|47208509|emb|CAF96454.1| unnamed protein product [Tetraodon nigroviridis] Length = 762 Score = 38.2 bits (88), Expect = 0.50 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 20/190 (10%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLF--WKADELIEKLKSKLIDPL------DACN 286 L +EL+ + + + A ++ K + +KL+ L + A Sbjct: 571 EKQRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEESTLQHEATAAAL 630 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR 346 + + + + ++ + D + ME VA+ K + K R Sbjct: 631 RKKQADSVAELGEQIDNLQRVKQKLEKEKSEYKM--EIDDLSSNMEAVAKAKANLEKMCR 688 Query: 347 SVLDACD----------RELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL 396 ++ D R+L D + L+ E + QIEE E+++ + Sbjct: 689 TLEDQLSEIKSKNDENVRQLNDLSAQKARLQTENGEFSRQIEEKEALISQLTRGKQAYTQ 748 Query: 397 KADEARREAE 406 + DE +R E Sbjct: 749 QIDELKRHIE 758 >gi|30178670|gb|EAA45415.1| ENSANGP00000009410 [Anopheles gambiae str. PEST] Length = 2016 Score = 38.2 bits (88), Expect = 0.53 Identities = 38/189 (20%), Positives = 71/189 (37%), Gaps = 16/189 (8%) Query: 264 FWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV 323 K +E + ++ L +L + D E E +A +E Sbjct: 1031 LKKMEEDVALIE-DQNHKLVKEKKLLEE-RANDLSQTLAEEEEKAKHLAKLKVKHEST-- 1086 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELES- 382 +AE + R+ K + DR V DLK + +++ QIEE++ Sbjct: 1087 ----------IAELEERLLKDHQQ-RQEADRSKRKIETEVADLKEQINERRMQIEEMQQQ 1135 Query: 383 IVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL 442 +V+ ++ A +E+ +A + KL S+AE++++ L Sbjct: 1136 LVKREEELAQTLVRIDEESAAKAAAQKTQRELESQLAEIQEDLEAEKLARSKAEKQKRDL 1195 Query: 443 FEELKAQEN 451 EEL+A +N Sbjct: 1196 NEELEALKN 1204 >gi|38347763|dbj|BAD01607.1| myosin heavy chain [Lethenteron japonicum] Length = 1491 Score = 38.2 bits (88), Expect = 0.54 Identities = 44/246 (17%), Positives = 87/246 (35%), Gaps = 36/246 (14%) Query: 259 RGKKLFWKADELIEKLKSKLIDPLDACNFILM---FFQECDSDSPSLENGE---GGFLIA 312 R L + +E+ L+ A +L Q S + SL N + G ++ Sbjct: 1233 RNNLLLAEVEEMRTALEQTERARKVAEQELLGATERVQLLHSQNTSLINTKRKLEGDIVQ 1292 Query: 313 PQDACNEIAEVVQDTA-RKMEVVAEEKMR--MFKKARSV----------LDACDRELEDK 359 Q+ C E + ++ + + + + M KK + ++ ++L+++ Sbjct: 1293 LQNECEEAIQESRNADEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQNR 1352 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA-------------- 405 + M+ KK QI++LE+ VR ++E D Q + E + A Sbjct: 1353 LDEAEQIAMKGGKK--QIQKLETRVRELESELDSEQRRIAETIKGARKYERRVKELTYQA 1410 Query: 406 -EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRME 464 E K K + EAEE+ + + ++ + D E Sbjct: 1411 EEDRKNNLRLQDLVDKLQLKVKTYKRQSEEAEEQANTNLSKYRKMQHELEEADERADIAE 1470 Query: 465 SEIRGL 470 S++ L Sbjct: 1471 SQVNKL 1476 >SMC_N_Q6P5E5_2-1196_PF02463.7 Length = 1195 Score = 37.9 bits (87), Expect = 0.56 Identities = 42/280 (15%), Positives = 94/280 (33%), Gaps = 41/280 (14%) Query: 210 FHCIACNHTSELFGFVKDV-FQHCAPNWDFEALIKELDFVRKIFRGSEDARGK--KLFWK 266 ++ + +++ + + + + + +E R K +L Sbjct: 135 YYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKY 194 Query: 267 ADELIEKLKSKLIDPLDACNFILMFF--------QECDSDSPSLENGEGGFLIAPQDAC- 317 +E + L+ + + + M QE + L+ + + + Sbjct: 195 IEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQ 254 Query: 318 ------------NEIAEVVQDTARKMEVVAEEKMR------MFKKARSVLDACDRELEDK 359 +I V++ K+ + EEK + K R+ L+ ++L+D+ Sbjct: 255 LRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDE 314 Query: 360 ----ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXX 415 + L ERQK +IEE KQ E + K + + + E Sbjct: 315 LAGNSEQRKRLLKERQKLLEKIEE-------KQKELAETEPKFNSVKEKEERGIARLAQA 367 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD 455 Y + + + EER +++ +ELK+ + + D Sbjct: 368 TQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAIND 407 >SMC_N_SMC3_2-1198_PF02463.7 Length = 1197 Score = 37.9 bits (87), Expect = 0.56 Identities = 42/280 (15%), Positives = 94/280 (33%), Gaps = 41/280 (14%) Query: 210 FHCIACNHTSELFGFVKDV-FQHCAPNWDFEALIKELDFVRKIFRGSEDARGK--KLFWK 266 ++ + +++ + + + + + +E R K +L Sbjct: 135 YYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKY 194 Query: 267 ADELIEKLKSKLIDPLDACNFILMFF--------QECDSDSPSLENGEGGFLIAPQDAC- 317 +E + L+ + + + M QE + L+ + + + Sbjct: 195 IEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQ 254 Query: 318 ------------NEIAEVVQDTARKMEVVAEEKMR------MFKKARSVLDACDRELEDK 359 +I V++ K+ + EEK + K R+ L+ ++L+D+ Sbjct: 255 LRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDE 314 Query: 360 ----ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXX 415 + L ERQK +IEE KQ E + K + + + E Sbjct: 315 LAGNSEQRKRLLKERQKLLEKIEE-------KQKELAETEPKFNSVKEKEERGIARLAQA 367 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD 455 Y + + + EER +++ +ELK+ + + D Sbjct: 368 TQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAIND 407 >gi|71651266|ref|XP_814314.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 1354 Score = 37.9 bits (87), Expect = 0.56 Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 8/144 (5%) Query: 264 FWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV 323 D +K+K++ +D + C + SPS GE L + + E Sbjct: 694 EKNVDAAEDKMKNEPVDNAEGCEAEKNSLGNRGNASPS---GEIESLSSAALMLRQEIES 750 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVL-DACDRELEDKACAVTDLKMERQKKKPQIEELES 382 +Q+ R E V +KM + D R + +A + K+E QKK EE E Sbjct: 751 LQEKRRHEEEVLLKKMEEALGTLLKIEDTMKRVSQREAKEIERKKLEMQKK----EEAEK 806 Query: 383 IVRLKQAEADMFQLKADEARREAE 406 +R +QAEA L+ + R+ E Sbjct: 807 RMRREQAEARARALEEELLRKHEE 830 >SMC_N_SMC3_2-1191_PF02463.7 Length = 1190 Score = 37.9 bits (87), Expect = 0.58 Identities = 42/280 (15%), Positives = 94/280 (33%), Gaps = 41/280 (14%) Query: 210 FHCIACNHTSELFGFVKDV-FQHCAPNWDFEALIKELDFVRKIFRGSEDARGK--KLFWK 266 ++ + +++ + + + + + +E R K +L Sbjct: 135 YYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKY 194 Query: 267 ADELIEKLKSKLIDPLDACNFILMFF--------QECDSDSPSLENGEGGFLIAPQDAC- 317 +E + L+ + + + M QE + L+ + + + Sbjct: 195 IEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQ 254 Query: 318 ------------NEIAEVVQDTARKMEVVAEEKMR------MFKKARSVLDACDRELEDK 359 +I V++ K+ + EEK + K R+ L+ ++L+D+ Sbjct: 255 LRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDE 314 Query: 360 ----ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXX 415 + L ERQK +IEE KQ E + K + + + E Sbjct: 315 LAGNSEQRKRLLKERQKLLEKIEE-------KQKELAETEPKFNSVKEKEERGIARLAQA 367 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD 455 Y + + + EER +++ +ELK+ + + D Sbjct: 368 TQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAIND 407 >gi|71748844|ref|XP_823477.1| hypothetical protein Tb10.389.0860 [Trypanosoma brucei] Length = 902 Score = 37.9 bits (87), Expect = 0.59 Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 6/166 (3%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 VK+ + W+ ++ + KI + +ED KKL + L E+L + Sbjct: 429 VKESTRRADELWELLSVERR-QSGEKIAQMTED--CKKLRRDCENLSERLAKEQEKARKE 485 Query: 285 CNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKK 344 C + + + + +L+ ++ ++ + Q+ AR M+ E+ + K+ Sbjct: 486 CQRLKDELHKAEESAKTLQRELNNRDLSFENYKQQSEGQQQEMARSMK---EDLAKTKKR 542 Query: 345 ARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 LD R L+ + AV +L+ ER K++ + +E+ V +AE Sbjct: 543 LEHELDVTQRRLQKQLDAVGELERERDKERSERRAVEATVAKLEAE 588 Searching..................................................done Results from round 4 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|8777406|dbj|BAA96996.1| unnamed protein product [Arabidopsis ... 553 e-156 gi|6466960|gb|AAF13095.1| unknown protein [Arabidopsis thaliana] 547 e-154 DUF1423_Q9LUB7_73-557_PF07227.1 540 e-152 DUF1423_Q9S736_74-548_PF07227.1 528 e-148 gi|30385713|gb|AAP22955.1| Potyvirus VPg interacting protein [Pi... 521 e-146 DUF1423_Q84N37_19-496_PF07227.1 514 e-144 gi|30385711|gb|AAP22954.1| Potyvirus VPg interacting protein [Ni... 505 e-141 DUF1423_Q84N38_72-549_PF07227.1 498 e-140 gi|8778236|gb|AAF79245.1| F10B6.14 [Arabidopsis thaliana] 491 e-137 gi|20148719|gb|AAM10250.1| unknown protein [Arabidopsis thaliana] 472 e-131 DUF1423_Q9LQV7_285-755_PF07227.1 458 e-127 gi|28973711|gb|AAO64172.1| unknown protein [Arabidopsis thaliana] 440 e-122 gi|7573333|emb|CAB87803.1| putative protein [Arabidopsis thaliana] 433 e-120 DUF1423_Q84TI3_497-969_PF07227.1 416 e-115 gi|68172762|ref|ZP_00546043.1| AAA ATPase, central region:Clp, N... 193 7e-48 gi|41326957|emb|CAF20801.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 193 1e-47 gi|68229264|ref|ZP_00568461.1| AAA ATPase, central region:Clp, N... 193 1e-47 gi|4098131|gb|AAD00218.1| clpB [Mycobacterium bovis] 190 1e-46 gi|23494457|dbj|BAC19423.1| putative endopeptidase Clp ATP-bindi... 189 1e-46 gi|68537287|ref|ZP_00577067.1| AAA ATPase, central region:Clp, N... 189 1e-46 gi|41409951|ref|NP_962787.1| ClpB [Mycobacterium avium subsp. pa... 188 3e-46 gi|56543894|gb|AAV90048.1| ATP-dependent Clp protease [Zymomonas... 188 4e-46 gi|13472967|ref|NP_104534.1| endopeptidase Clp ATP-binding chain... 187 6e-46 gi|17982078|gb|AAL51377.1| ATP-DEPENDENT CLP PROTEASE, ATP-BINDI... 187 6e-46 gi|27376515|ref|NP_768044.1| ATP-dependent protease ATP-binding ... 185 2e-45 gi|68189537|gb|EAN04203.1| AAA ATPase, central region:Clp, N ter... 185 3e-45 gi|38234653|ref|NP_940420.1| Putative ATP-dependent protease reg... 184 6e-45 gi|75674787|ref|YP_317208.1| AAA ATPase [Nitrobacter winogradsky... 183 8e-45 gi|48849033|ref|ZP_00303277.1| COG0542: ATPases with chaperone a... 183 1e-44 gi|54294637|ref|YP_127052.1| endopeptidase Clp ATP-binding chain... 183 1e-44 gi|15159084|gb|AAK89256.1| AGR_L_1346p [Agrobacterium tumefacien... 182 2e-44 gi|72160604|ref|YP_288261.1| ATPase [Thermobifida fusca YX] 181 3e-44 gi|68262865|emb|CAI36353.1| ATP-dependent Clp protease, ATP-bind... 181 3e-44 gi|58698222|ref|ZP_00373142.1| ATP-dependent Clp protease, ATP-b... 181 4e-44 gi|68538354|ref|ZP_00578132.1| AAA ATPase, central region:Clp, N... 181 4e-44 gi|67153835|ref|ZP_00415580.1| AAA ATPase, central region:Clp, N... 181 5e-44 gi|39937493|ref|NP_949769.1| endopeptidase Clp: ATP-binding subu... 180 5e-44 gi|26248955|ref|NP_754995.1| ClpB protein [Escherichia coli CFT073] 180 6e-44 gi|66802530|ref|XP_635137.1| hypothetical protein DDB0183816 [Di... 180 7e-44 gi|28629052|gb|AAO49455.1| heat shock protein 78 [Leptosphaeria ... 180 8e-44 gi|69300937|ref|ZP_00622398.1| AAA ATPase, central region:Clp, N... 180 1e-43 gi|76164358|gb|EAO58508.1| AAA ATPase, central region:Clp, N ter... 180 1e-43 gi|42631176|ref|ZP_00156714.1| COG0542: ATPases with chaperone a... 180 1e-43 gi|46202513|ref|ZP_00053096.2| COG0542: ATPases with chaperone a... 179 2e-43 gi|58580960|ref|YP_199976.1| ATP-dependent Clp protease subunit ... 178 3e-43 gi|53802726|ref|YP_115493.1| ATP-dependent Clp protease, ATP-bin... 178 3e-43 gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone a... 178 3e-43 gi|33151758|ref|NP_873111.1| ATP-dependant Clp protease chain B ... 178 4e-43 gi|71368674|ref|ZP_00659163.1| AAA ATPase, central region:Clp, N... 177 5e-43 gi|16125131|ref|NP_419695.1| ATP-dependent Clp protease, ATP-bin... 177 5e-43 gi|56708764|ref|YP_170660.1| ClpB protein [Francisella tularensi... 177 6e-43 gi|61102045|ref|ZP_00377499.1| ATP-dependent Clp protease [Eryth... 177 6e-43 gi|11561806|gb|AAC83688.2| 101 kDa heat shock protein; HSP101 [N... 176 1e-42 gi|530207|gb|AAA66338.1| heat shock protein 175 2e-42 gi|68180177|ref|ZP_00553160.1| AAA ATPase, central region:Clp, N... 175 2e-42 gi|46156241|ref|ZP_00133175.2| COG0542: ATPases with chaperone a... 175 2e-42 gi|61679305|gb|AAX52932.1| ClpB [Bifidobacterium animalis subsp.... 175 3e-42 gi|38492939|pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb 175 3e-42 gi|537446|gb|AAA67927.1| AtHSP101 174 4e-42 gi|28199560|ref|NP_779874.1| ATP-dependent Clp protease subunit ... 174 4e-42 gi|71908340|ref|YP_285927.1| AAA ATPase, central region:Clp, N t... 174 5e-42 gi|56417033|ref|YP_154107.1| ATP-dependent clp protease ATP-bind... 174 5e-42 gi|56419334|ref|YP_146652.1| ATP-dependent Clp protease ATP-bind... 174 5e-42 gi|49612793|emb|CAG76243.1| ClpB protein (heat shock protein f84... 174 5e-42 gi|56679839|gb|AAV96505.1| ATP-dependent Clp protease, ATP-bindi... 174 5e-42 gi|37525237|ref|NP_928581.1| heat shock protein F84.1 [Photorhab... 174 5e-42 gi|48861360|ref|ZP_00315262.1| COG0542: ATPases with chaperone a... 173 7e-42 gi|22124822|ref|NP_668245.1| heat shock protein [Yersinia pestis... 173 8e-42 gi|68213889|ref|ZP_00565718.1| AAA ATPase, central region:Clp, N... 173 8e-42 gi|69935649|ref|ZP_00630585.1| AAA ATPase, central region:Clp, N... 173 1e-41 gi|50843466|ref|YP_056693.1| ATP-dependent protease (Clp chapero... 173 1e-41 gi|3150046|gb|AAC16900.1| ClpB chaperone homolog [Lactococcus la... 173 1e-41 gi|75824073|ref|ZP_00753540.1| COG0542: ATPases with chaperone a... 173 1e-41 gi|24427167|emb|CAD55328.1| ATP-dependent protease ATP-binding s... 173 1e-41 gi|58584441|ref|YP_198014.1| ATP-binding subunit of Clp protease... 173 1e-41 gi|15075632|emb|CAC47187.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 172 1e-41 gi|72384775|gb|AAZ67679.1| chaperone putative [Haemophilus paras... 172 2e-41 gi|59711173|ref|YP_203949.1| ClpB protein [Vibrio fischeri ES114] 172 2e-41 gi|74316833|ref|YP_314573.1| ClpB protein [Thiobacillus denitrif... 172 2e-41 gi|52307890|gb|AAU38390.1| ClpA protein [Mannheimia succinicipro... 172 2e-41 gi|29653454|ref|NP_819146.1| clpB protein [Coxiella burnetii RSA... 172 2e-41 gi|69927725|ref|ZP_00624886.1| AAA ATPase, central region:Clp, N... 171 3e-41 gi|54310128|ref|YP_131148.1| putative clpB, ATPases with chapero... 171 3e-41 gi|32452329|emb|CAD59396.1| putative ClpB1 protein [Propionibact... 171 4e-41 gi|48763004|ref|ZP_00267561.1| COG0542: ATPases with chaperone a... 171 4e-41 gi|66870845|gb|EAL98209.1| AAA ATPase, central region:Clp, N ter... 171 4e-41 gi|71891969|ref|YP_277699.1| ATP-dependent protease [Candidatus ... 171 4e-41 gi|27360063|gb|AAO09001.1| ClpB protein [Vibrio vulnificus CMCP6] 171 4e-41 gi|58039904|ref|YP_191868.1| ATP-dependent Clp protease, ATP-bin... 171 5e-41 gi|73667261|ref|YP_303277.1| AAA ATPase, central region:Clp, N t... 170 5e-41 gi|42544975|gb|EAA67818.1| conserved hypothetical protein [Gibbe... 170 5e-41 gi|68171311|ref|ZP_00544710.1| AAA ATPase, central region:Clp, N... 170 6e-41 gi|56479246|ref|YP_160835.1| ClpB protein [Azoarcus sp. EbN1] 170 6e-41 gi|71547803|ref|ZP_00668357.1| AAA ATPase, central region:Clp, N... 170 7e-41 gi|66043993|ref|YP_233834.1| AAA ATPase, central region:Clp, N t... 170 1e-40 gi|17864015|gb|AAL47016.1| ClpB ATP protease [Paracoccidioides b... 169 1e-40 gi|6458777|gb|AAF10620.1| ATP-dependent Clp protease, ATP-bindin... 169 1e-40 gi|69954129|ref|ZP_00640937.1| AAA ATPase, central region:Clp, N... 169 1e-40 gi|12722113|gb|AAK03788.1| ClpB [Pasteurella multocida subsp. mu... 169 1e-40 gi|21204024|dbj|BAB94722.1| clpB [Staphylococcus aureus subsp. a... 169 1e-40 gi|23474967|ref|ZP_00130258.1| COG0542: ATPases with chaperone a... 169 2e-40 gi|15023863|gb|AAK78935.1| ATPase with chaperone activity, two A... 169 2e-40 gi|50084451|ref|YP_045961.1| ATP-dependent protease, Hsp 100, pa... 168 2e-40 gi|57866505|ref|YP_188155.1| ATP-dependent Clp protease, ATP-bin... 168 2e-40 gi|67985293|gb|EAM73247.1| AAA ATPase, central region:Clp, N ter... 168 2e-40 gi|75429872|ref|ZP_00732490.1| ATPases with chaperone activity, ... 168 3e-40 gi|8575704|gb|AAF78058.1| ClpB protease [secondary endosymbiont ... 168 3e-40 gi|32423740|gb|AAP81264.1| ClpB [Pseudomonas aeruginosa] 168 3e-40 gi|71550106|ref|ZP_00670254.1| AAA ATPase, central region:Clp, N... 168 3e-40 gi|26987361|ref|NP_742786.1| ATP-dependent Clp protease, ATP-bin... 168 3e-40 gi|18145090|dbj|BAB81134.1| clpB protein [Clostridium perfringen... 168 4e-40 gi|17428350|emb|CAD15037.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 168 4e-40 gi|66782797|gb|EAL83760.1| AAA ATPase, central region:Clp, N ter... 168 4e-40 gi|32422771|ref|XP_331829.1| hypothetical protein [Neurospora cr... 167 5e-40 gi|56460289|ref|YP_155570.1| ATP-binding subunit of Clp protease... 167 6e-40 gi|69945234|ref|ZP_00636365.1| AAA ATPase, central region:Clp, N... 167 6e-40 gi|71543204|ref|ZP_00664602.1| AAA ATPase, central region:Clp, N... 167 6e-40 gi|33602268|ref|NP_889828.1| ATP-dependent protease, ATPase subu... 167 6e-40 gi|37523146|ref|NP_926523.1| endopeptidase Clp ATP-binding chain... 167 7e-40 gi|23335984|ref|ZP_00121214.1| COG0542: ATPases with chaperone a... 167 7e-40 gi|47573811|ref|ZP_00243848.1| COG0542: ATPases with chaperone a... 167 7e-40 gi|68209271|ref|ZP_00561312.1| AAA ATPase, central region:Clp, N... 167 7e-40 gi|52209532|emb|CAH35485.1| ClpB heat-shock protein [Burkholderi... 167 7e-40 gi|75853631|ref|ZP_00761428.1| COG0542: ATPases with chaperone a... 167 7e-40 gi|67676700|ref|ZP_00473446.1| AAA ATPase, central region:Clp, N... 166 8e-40 gi|11561808|gb|AAC83689.2| 101 kDa heat shock protein; HSP101 [T... 166 8e-40 gi|73541668|ref|YP_296188.1| AAA ATPase, central region:Clp, N t... 166 1e-39 gi|68054833|ref|ZP_00538983.1| AAA ATPase, central region:Clp, N... 166 1e-39 gi|68528191|gb|EAN51157.1| AAA ATPase, central region:Clp, N ter... 166 1e-39 gi|42453220|ref|ZP_00153127.1| COG0542: ATPases with chaperone a... 166 1e-39 gi|54035876|sp|Q8YM56|CLPB2_ANASP Chaperone clpB 2 166 1e-39 gi|24375079|ref|NP_719122.1| clpB protein [Shewanella oneidensis... 166 1e-39 gi|28378553|ref|NP_785445.1| ATP-dependent Clp protease, ATP-bin... 165 2e-39 gi|68002317|ref|ZP_00534948.1| AAA ATPase, central region:Clp, N... 165 2e-39 gi|14583098|gb|AAK69758.1| CDPK adapter protein 1 [Mesembryanthe... 165 2e-39 gi|54035919|sp|Q9Z6E4|CLPB_STRAL Chaperone clpB 165 2e-39 gi|74019149|ref|ZP_00689767.1| AAA ATPase, central region:Clp, N... 165 2e-39 gi|885934|gb|AAB09631.1| ClpB 165 2e-39 gi|51473305|ref|YP_067062.1| ATP-binding ClpB chaperone [Rickett... 165 2e-39 gi|58417961|emb|CAI27165.1| ClpB protein [Ehrlichia ruminantium ... 165 2e-39 gi|3360502|gb|AAC62621.1| heat shock protein [Plectonema boryanum] 165 3e-39 gi|52698325|ref|ZP_00339733.1| COG0542: ATPases with chaperone a... 165 3e-39 gi|70732609|ref|YP_262372.1| ClpB protein PA4542 [Pseudomonas fl... 165 3e-39 gi|71675495|ref|ZP_00673240.1| AAA ATPase, central region:Clp, N... 165 3e-39 gi|22295113|dbj|BAC08941.1| ClpB protein [Thermosynechococcus el... 165 3e-39 gi|28210275|ref|NP_781219.1| clpB protein [Clostridium tetani E88] 164 4e-39 gi|48783814|ref|ZP_00280195.1| COG0542: ATPases with chaperone a... 164 5e-39 gi|46580283|ref|YP_011091.1| ATP-dependent Clp protease, ATP-bin... 164 5e-39 gi|68195152|gb|EAN09610.1| AAA ATPase, central region:Clp, N ter... 164 5e-39 gi|15828345|ref|NP_302608.1| heat shock protein [Mycobacterium l... 164 5e-39 gi|31872394|gb|AAP59445.1| ClpB-like protein [Meiothermus ruber] 163 7e-39 gi|71281252|ref|YP_270571.1| ATP-dependent chaperone protein Clp... 163 8e-39 gi|67517989|ref|XP_658767.1| hypothetical protein AN1163.2 [Aspe... 163 9e-39 gi|39944910|ref|XP_361992.1| hypothetical protein MG04437.4 [Mag... 163 9e-39 gi|70726976|ref|YP_253890.1| hypothetical protein SH1975 [Staphy... 163 1e-38 gi|66805423|ref|XP_636444.1| hypothetical protein DDB0188234 [Di... 163 1e-38 gi|6013196|gb|AAF01280.1| heat shock protein 101 [Triticum aesti... 163 1e-38 gi|50918667|ref|XP_469730.1| unknown protein [Oryza sativa (japo... 163 1e-38 gi|22957954|ref|ZP_00005638.1| COG0542: ATPases with chaperone a... 163 1e-38 gi|34497399|ref|NP_901614.1| ATP-dependent Clp protease subunit;... 162 1e-38 gi|22535406|emb|CAC87117.1| heat shock protein 101 [Oryza sativa... 162 2e-38 gi|33519653|ref|NP_878485.1| ATP-dependent protease, Hsp 100, pa... 162 2e-38 gi|73663109|ref|YP_301890.1| putative ATPase subunit of an ATP-d... 162 2e-38 gi|54027376|ref|YP_121618.1| putative Clp protease ATP-binding s... 161 2e-38 gi|51535981|dbj|BAD38062.1| putative coiled-coil protein [Oryza ... 161 3e-38 gi|33945097|ref|XP_340696.1| heat shock protein 100 [Trypanosoma... 161 3e-38 gi|71837201|ref|ZP_00676967.1| AAA ATPase, central region:Clp, N... 161 5e-38 gi|23128455|ref|ZP_00110302.1| COG0542: ATPases with chaperone a... 160 6e-38 gi|16331048|ref|NP_441776.1| ClpB protein [Synechocystis sp. PCC... 160 6e-38 gi|66854676|ref|ZP_00398756.1| AAA ATPase, central region:Clp, N... 160 7e-38 gi|66850118|gb|EAL90445.1| ATP-dependent Clp protease, putative ... 160 7e-38 gi|4481954|emb|CAB38512.1| SPBC16D10.08c [Schizosaccharomyces po... 160 8e-38 gi|67907151|ref|ZP_00505556.1| AAA ATPase, central region:Clp, N... 160 8e-38 gi|29608171|dbj|BAC72226.1| putative ATP-dependent Clp protease ... 160 8e-38 gi|42527829|ref|NP_972927.1| ATP-dependent Clp protease, ATP-bin... 160 1e-37 gi|29610907|dbj|BAC74952.1| putative ATP-dependent Clp protease ... 160 1e-37 gi|46908440|ref|YP_014829.1| clpB protein [Listeria monocytogene... 160 1e-37 gi|29376856|ref|NP_816010.1| ATP-dependent Clp protease, ATP-bin... 160 1e-37 gi|23123825|ref|ZP_00105864.1| COG0542: ATPases with chaperone a... 159 1e-37 gi|6320464|ref|NP_010544.1| Oligomeric mitochondrial matrix chap... 159 1e-37 gi|33634638|emb|CAE20624.1| ATP-dependent Clp protease, Hsp 100,... 159 2e-37 gi|3560150|emb|CAA20737.1| SPBC4F6.17c [Schizosaccharomyces pombe] 159 2e-37 gi|74022612|ref|ZP_00693193.1| AAA ATPase, central region:Clp, N... 159 2e-37 gi|33639012|emb|CAE08018.1| endopeptidase Clp ATP-binding chain ... 159 2e-37 gi|9651530|gb|AAF91178.1| ClpB [Phaseolus lunatus] 158 3e-37 gi|399265|sp|P17422|CLPB_BACNO Chaperone clpB 158 4e-37 gi|67923982|ref|ZP_00517435.1| AAA ATPase, central region:Clp, N... 157 6e-37 gi|39982528|gb|AAR33988.1| ClpB protein [Geobacter sulfurreducen... 157 7e-37 gi|44983280|gb|AAS52462.1| AEL223Cp [Ashbya gossypii ATCC 10895] 156 9e-37 gi|50955821|ref|YP_063109.1| ATP-dependent Clp protease, ATP-bin... 156 9e-37 gi|50876799|emb|CAG36639.1| probable heat shock protein ClpB [De... 156 1e-36 gi|67931988|ref|ZP_00525140.1| AAA ATPase, central region:Clp, N... 156 1e-36 gi|19713201|gb|AAL94040.1| ClpB protein [Fusobacterium nucleatum... 156 2e-36 gi|70800165|gb|AAZ10006.1| serine peptidase, putative [Leishmani... 155 2e-36 gi|62426046|ref|ZP_00381176.1| COG0542: ATPases with chaperone a... 155 2e-36 gi|70799667|gb|AAZ09583.1| Serine peptidase, putative [Leishmani... 155 2e-36 gi|7380324|emb|CAB84911.1| ClpB protein [Neisseria meningitidis ... 155 3e-36 gi|50309407|ref|XP_454711.1| unnamed protein product [Kluyveromy... 155 3e-36 gi|9755800|emb|CAC01744.1| clpB heat shock protein-like [Arabido... 154 4e-36 gi|7435720|pir||D71409 probable endopeptidase Clp ATP-binding ch... 154 4e-36 gi|50916753|ref|XP_468773.1| putative heat shock protein [Oryza ... 154 4e-36 gi|67934490|ref|ZP_00527533.1| AAA ATPase, central region:Clp, N... 154 5e-36 gi|67921632|ref|ZP_00515150.1| AAA ATPase, central region:Clp, N... 154 6e-36 gi|68246595|gb|EAN28691.1| AAA ATPase, central region:Clp, N ter... 154 6e-36 gi|57898943|emb|CAI44947.1| putative HSP100 protein [Phycomyces ... 153 7e-36 gi|42524440|ref|NP_969820.1| ATPase with chaperone activity, two... 153 8e-36 gi|68989120|dbj|BAE06227.1| heat shock protein [Lycopersicon esc... 153 9e-36 gi|15639065|ref|NP_218511.1| ATP-dependent Clp protease subunit ... 153 1e-35 gi|72381856|ref|YP_291211.1| ATPase [Prochlorococcus marinus str... 153 1e-35 gi|48870729|ref|ZP_00323448.1| COG0542: ATPases with chaperone a... 152 2e-35 gi|68178655|ref|ZP_00551766.1| IMP dehydrogenase/GMP reductase:A... 152 2e-35 gi|16331154|ref|NP_441882.1| ClpB protein [Synechocystis sp. PCC... 151 4e-35 gi|29570852|gb|AAO73810.2| heat shock protein CLPA [Paracoccidio... 151 4e-35 gi|50294636|ref|XP_449729.1| unnamed protein product [Candida gl... 150 7e-35 gi|24214579|ref|NP_712060.1| ATPase with chaperone activity, two... 150 7e-35 gi|68209799|ref|ZP_00561666.1| AAA ATPase, central region:Clp, N... 150 8e-35 gi|33240532|ref|NP_875474.1| ATPase with chaperone activity ATP-... 149 1e-34 gi|50942423|ref|XP_480739.1| putative coiled-coil protein [Oryza... 149 2e-34 gi|71363823|ref|ZP_00654425.1| AAA ATPase, central region:Clp, N... 148 4e-34 gi|56750897|ref|YP_171598.1| ATP-dependent Clp protease ATP-bind... 148 4e-34 gi|17979454|gb|AAL50064.1| At2g25140/F13D4.100 [Arabidopsis thal... 148 4e-34 gi|33861137|ref|NP_892698.1| ATP-dependent Clp protease, Hsp 100... 148 4e-34 gi|8778731|gb|AAF79739.1| T25N20.6 [Arabidopsis thaliana] 147 5e-34 gi|57222826|gb|AAW40870.1| heat shock protein, putative [Cryptoc... 147 7e-34 gi|40804910|gb|AAR91717.1| vernalization insensitive 3 [Arabidop... 147 7e-34 gi|33944507|ref|XP_340401.1| mitochondrial heat shock protein 78... 146 1e-33 gi|71661302|ref|XP_817674.1| ATP-dependent Clp protease subunit,... 146 2e-33 gi|71401304|ref|XP_803323.1| ATP-dependent Clp protease subunit,... 145 2e-33 gi|53712497|ref|YP_098489.1| endopeptidase Clp ATP-binding chain... 145 2e-33 gi|49655876|emb|CAG88481.1| unnamed protein product [Debaryomyce... 145 3e-33 gi|48855282|ref|ZP_00309441.1| COG0542: ATPases with chaperone a... 145 3e-33 gi|15425870|gb|AAK97626.1| heat shock protein 78 [Candida albicans] 145 3e-33 gi|23128140|ref|ZP_00109994.1| COG0542: ATPases with chaperone a... 144 4e-33 gi|17131414|dbj|BAB74021.1| endopeptidase Clp ATP-binding chain ... 144 4e-33 gi|67940377|ref|ZP_00532807.1| AAA ATPase, central region:Clp, N... 144 5e-33 gi|29341916|gb|AAO79702.1| endopeptidase Clp ATP-binding chain B... 143 8e-33 gi|34540850|ref|NP_905329.1| clpB protein [Porphyromonas gingiva... 143 9e-33 gi|47568371|ref|ZP_00239072.1| ATP-dependent Clp protease, ATP-b... 143 9e-33 gi|65303851|emb|CAI76228.1| ClpB protein, putative [Theileria an... 143 1e-32 gi|67919330|ref|ZP_00512911.1| AAA ATPase, central region:Clp, N... 143 1e-32 gi|71482382|ref|ZP_00662075.1| AAA ATPase, central region:Clp, N... 142 2e-32 gi|66850531|gb|EAL90858.1| ATP-dependent Clp protease, putative ... 141 3e-32 gi|67935560|ref|ZP_00528580.1| AAA ATPase, central region:Clp, N... 141 4e-32 gi|21675087|ref|NP_663152.1| ATP-dependent Clp protease, ATP-bin... 141 5e-32 gi|50555844|ref|XP_505330.1| hypothetical protein [Yarrowia lipo... 140 8e-32 gi|9294095|dbj|BAB01947.1| unnamed protein product [Arabidopsis ... 140 9e-32 gi|32446255|emb|CAD76084.1| ClpB protein [Rhodopirellula baltica... 139 1e-31 gi|67517159|ref|XP_658462.1| hypothetical protein AN0858.2 [Aspe... 139 1e-31 gi|68553506|ref|ZP_00592879.1| AAA ATPase, central region:Clp, N... 139 1e-31 gi|28493713|ref|NP_787874.1| ATP-dependent protase ATP-binding s... 139 2e-31 gi|68479564|ref|XP_716146.1| hypothetical protein CaO19_13747 [C... 139 2e-31 gi|50365236|ref|YP_053661.1| ATPase subunit of ATP-dependant pro... 139 2e-31 gi|39977113|ref|XP_369944.1| hypothetical protein MG06459.4 [Mag... 138 3e-31 gi|67914654|gb|EAM63991.1| AAA ATPase, central region:Clp, N ter... 138 3e-31 gi|68175940|ref|ZP_00549169.1| AAA ATPase, central region:Clp, N... 138 3e-31 gi|22296180|dbj|BAC10004.1| endopeptidase Clp ATP-binding chain ... 138 3e-31 gi|44985843|gb|AAS54454.1| AGL036Cp [Ashbya gossypii ATCC 10895] 138 4e-31 gi|6967978|emb|CAB75146.1| ATP-dependent CLP protease ATP-bindin... 138 4e-31 gi|54035913|sp|Q9PKS5|CLPB_CHLMU Chaperone clpB 137 6e-31 gi|68551190|ref|ZP_00590613.1| AAA ATPase, central region:Clp, N... 136 1e-30 gi|158818|gb|AAA29025.1| zinc-binding protein 135 2e-30 gi|1052593|emb|CAA90513.1| trithorax protein trxII [Drosophila m... 135 2e-30 gi|62998570|gb|AAF01451.2| HSP100 [Pleurotus sajor-caju] 135 3e-30 gi|66505208|ref|XP_392252.2| PREDICTED: similar to ENSANGP000000... 135 3e-30 gi|68350763|gb|EAN31526.1| ClpB protein, putative [Theileria parva] 134 3e-30 gi|67465519|ref|XP_648944.1| AAA family ATPase, putative [Entamo... 133 9e-30 gi|50288205|ref|XP_446531.1| unnamed protein product [Candida gl... 133 9e-30 gi|50311735|ref|XP_455896.1| unnamed protein product [Kluyveromy... 133 1e-29 gi|67463114|ref|XP_648214.1| HSP101-related protein [Entamoeba h... 133 1e-29 gi|60547711|gb|AAX23819.1| hypothetical protein At2g18880 [Arabi... 133 2e-29 gi|34482740|emb|CAE09740.1| CLP PROTEASE ATP-BINDING SUBUNIT [Wo... 132 2e-29 gi|899254|emb|CAA90349.1| predicted trithorax protein [Drosophil... 129 1e-28 gi|57505852|ref|ZP_00371777.1| ATP-dependent Clp protease, ATP-b... 129 1e-28 gi|57505126|ref|ZP_00371071.1| ATP-dependent Clp protease, ATP-b... 129 2e-28 gi|20808693|ref|NP_623864.1| ATPases with chaperone activity, AT... 128 2e-28 gi|23612849|ref|NP_704388.1| hypothetical protein [Plasmodium fa... 128 3e-28 gi|23480353|gb|EAA16934.1| ClpB protein [Plasmodium yoelii yoelii] 128 4e-28 gi|7189542|gb|AAF38444.1| ATP-dependent Clp protease, subunit B ... 127 6e-28 gi|7576225|emb|CAB87915.1| AtClpC [Arabidopsis thaliana] 127 7e-28 gi|49655166|emb|CAG87721.1| unnamed protein product [Debaryomyce... 127 7e-28 gi|29840383|ref|NP_829489.1| ATP-dependent Clp protease, subunit... 127 7e-28 gi|42561142|ref|NP_975593.1| ATP dependant protease ClpB [Mycopl... 127 8e-28 gi|51038197|gb|AAT94000.1| unknow protein [Oryza sativa (japonic... 126 1e-27 gi|57241181|ref|ZP_00369128.1| clpB protein VC0711 [Campylobacte... 126 1e-27 gi|50759355|ref|XP_425739.1| PREDICTED: similar to C-ski protein... 126 2e-27 gi|32261656|gb|AAP76706.1| ATP-dependent CLP protease ClpA [Heli... 125 3e-27 gi|399212|sp|P31541|CLAA_LYCES ATP-dependent Clp protease ATP-bi... 124 4e-27 gi|68548612|ref|ZP_00588090.1| AAA ATPase, central region [Shewa... 124 4e-27 gi|71677561|ref|ZP_00675297.1| AAA ATPase, central region:Clp, N... 123 2e-26 gi|15827032|ref|NP_301295.1| putative ATP-dependent Clp protease... 121 6e-26 gi|18859373|ref|NP_571010.1| nuclear oncoprotein skia [Danio rerio] 119 1e-25 gi|21203645|dbj|BAB94345.1| endopeptidase [Staphylococcus aureus... 119 2e-25 gi|7269920|emb|CAB81013.1| putative protein [Arabidopsis thaliana] 118 4e-25 gi|68512803|gb|EAN36605.1| UvrB/UvrC protein:AAA ATPase, central... 114 4e-24 gi|55242025|gb|EAL40845.1| ENSANGP00000028094 [Anopheles gambiae... 114 5e-24 gi|55242024|gb|EAA08123.3| ENSANGP00000002662 [Anopheles gambiae... 114 5e-24 gi|26006129|dbj|BAC41407.1| mKIAA0304 protein [Mus musculus] 114 6e-24 gi|68562872|ref|ZP_00602103.1| UvrB/UvrC protein:AAA ATPase, cen... 114 7e-24 gi|62639360|ref|XP_341830.2| PREDICTED: similar to mixed lineage... 113 2e-23 AAA_CLPB1_203-397_PF00004.17 112 2e-23 AAA_CLPB_204-398_PF00004.17 112 3e-23 AAA_CLPB_201-395_PF00004.17 111 4e-23 AAA_CLPB1_203-399_PF00004.17 111 4e-23 gi|23481616|gb|EAA17840.1| Bromodomain, putative [Plasmodium yoe... 111 4e-23 gi|5123787|emb|CAB45385.1| trithorax homologue 2 [Homo sapiens] 111 4e-23 AAA_CLPB_202-397_PF00004.17 111 5e-23 AAA_Q5E7D5_201-395_PF00004.17 110 7e-23 AAA_CLPB_201-395_PF00004.17 110 8e-23 AAA_Q5X4G2_201-395_PF00004.17 110 9e-23 gi|61869994|ref|XP_582097.1| PREDICTED: similar to Myeloid/lymph... 110 1e-22 AAA_CLPB_200-394_PF00004.17 109 1e-22 AAA_CLPB_202-401_PF00004.17 109 1e-22 AAA_Q5H380_238-432_PF00004.17 109 1e-22 AAA_CLPB_193-386_PF00004.17 109 1e-22 AAA_Q5NE82_201-395_PF00004.17 109 2e-22 gi|1351069|sp|P49140|SKI_CHICK Ski oncogene (C-ski) 109 2e-22 AAA_CLPB1_202-396_PF00004.17 109 2e-22 AAA_CLPB2_203-397_PF00004.17 109 2e-22 gi|6048269|emb|CAB58126.1| c-ski protein [Oreochromis aureus] 108 3e-22 gi|104548|pir||B32575 C-ski protein FB28 - chicken 108 3e-22 AAA_CLPB_201-395_PF00004.17 108 3e-22 gi|68070837|ref|XP_677332.1| SET-domain protein, putative [Plasm... 108 4e-22 AAA_CLPB_202-396_PF00004.17 108 4e-22 AAA_Q8X1A0_131-325_PF00004.17 108 4e-22 AAA_CLPB_202-396_PF00004.17 108 4e-22 AAA_Q5L1U6_202-396_PF00004.17 108 5e-22 gi|23612374|ref|NP_703954.1| SET-domain protein, putative [Plasm... 107 5e-22 gi|65101|emb|CAA48642.1| c-ski [Xenopus laevis] 107 7e-22 gi|73956613|ref|XP_546730.2| PREDICTED: similar to Ski oncogene ... 107 7e-22 AAA_CLPB_201-395_PF00004.17 106 1e-21 AAA_CLPB2_203-397_PF00004.17 106 1e-21 AAA_Q5NYD0_201-395_PF00004.17 106 1e-21 AAA_Q5FQY4_202-396_PF00004.17 106 1e-21 AAA_CLPB2_204-398_PF00004.17 106 1e-21 AAA_CLPB_193-386_PF00004.17 106 1e-21 gi|6648214|gb|AAF21212.1| unknown protein [Arabidopsis thaliana] 106 1e-21 gi|21322226|ref|NP_035515.1| Sloan-Kettering viral oncogene homo... 106 2e-21 AAA_CLPB_201-395_PF00004.17 106 2e-21 gi|33339558|gb|AAQ14302.1| ABRH1 [Marsilea quadrifolia] 106 2e-21 AAA_Q96TW3_202-394_PF00004.17 106 2e-21 AAA_CLPB_206-400_PF00004.17 106 2e-21 AAA_Q5QTU7_201-395_PF00004.17 105 2e-21 AAA_CLPB_205-399_PF00004.17 105 2e-21 gi|4506967|ref|NP_003027.1| v-ski sarcoma viral oncogene homolog... 105 2e-21 gi|68381002|ref|XP_695268.1| PREDICTED: similar to Myeloid/lymph... 105 2e-21 AAA_CLPB_201-395_PF00004.17 105 2e-21 gi|42565848|ref|NP_190778.2| PHD finger family protein [Arabidop... 105 3e-21 gi|46329445|gb|AAH68305.1| Ski protein [Mus musculus] 105 3e-21 AAA_Q68XR2_202-396_PF00004.17 104 4e-21 AAA_CLPB_201-395_PF00004.17 104 4e-21 AAA_CLPB1_203-398_PF00004.17 104 6e-21 AAA_CLPB_201-395_PF00004.17 104 7e-21 AAA_CLPB_202-396_PF00004.17 103 9e-21 gi|61815938|ref|XP_599963.1| PREDICTED: similar to CDC42-binding... 103 1e-20 AAA_CLPB2_206-400_PF00004.17 102 2e-20 gi|33641129|emb|CAE22259.1| putative ATP-dependent Clp protease,... 102 2e-20 gi|67155734|ref|ZP_00417361.1| AAA ATPase, central region:Clp, N... 102 2e-20 AAA_CLPB_201-395_PF00004.17 102 2e-20 gi|6754392|ref|NP_034717.1| intersectin 1 (SH3 domain protein 1A... 102 3e-20 AAA_Q873Z4_139-332_PF00004.17 101 4e-20 gi|3309543|gb|AAC41377.1| MLL [Takifugu rubripes] 101 6e-20 AAA_Q6AC89_75-269_PF00004.17 101 6e-20 gi|47221226|emb|CAG13162.1| unnamed protein product [Tetraodon n... 100 7e-20 gi|6048267|emb|CAB58125.1| c-ski protein [Oreochromis aureus] 100 9e-20 gi|34499124|ref|NP_903339.1| ATP-dependent Clp protease, ATP-bin... 100 1e-19 gi|66359990|ref|XP_627173.1| multidomain chromatinic protein [Cr... 99 1e-19 gi|62650161|ref|XP_233731.3| PREDICTED: similar to Ski protein [... 99 2e-19 gi|55655772|ref|XP_531442.1| PREDICTED: similar to intersectin 1... 99 3e-19 gi|73955094|ref|XP_546507.2| PREDICTED: similar to golgi autoant... 98 5e-19 gi|34904048|ref|NP_913371.1| P0489G09.12 [Oryza sativa (japonica... 98 5e-19 gi|68351395|gb|EAN32158.1| hypothetical protein, conserved [Thei... 98 6e-19 gi|55656928|ref|XP_514872.1| PREDICTED: similar to intersectin 1... 97 8e-19 gi|62665845|ref|XP_228081.3| PREDICTED: similar to Disco-interac... 97 8e-19 gi|55631422|ref|XP_520008.1| PREDICTED: plectin 1 [Pan troglodytes] 97 1e-18 AAA_CLPB_204-397_PF00004.17 97 1e-18 gi|14133241|dbj|BAA86438.2| KIAA1124 protein [Homo sapiens] 96 1e-18 gi|4838526|gb|AAD31026.1| EH-domain/SH3-domain containing protei... 96 2e-18 gi|34904046|ref|NP_913370.1| P0489G09.11 [Oryza sativa (japonica... 95 4e-18 gi|50748728|ref|XP_421380.1| PREDICTED: similar to KIAA1124 prot... 95 5e-18 gi|53801462|gb|AAU93933.1| plastid clpB [Helicosporidium sp. ex ... 95 5e-18 gi|74001175|ref|XP_857677.1| PREDICTED: similar to Intersectin 1... 94 7e-18 gi|72139351|ref|XP_782203.1| PREDICTED: similar to myeloid/lymph... 94 9e-18 gi|65304433|emb|CAI76812.1| hypothetical protein, conserved [The... 93 2e-17 gi|66855575|ref|ZP_00399649.1| AAA ATPase, central region:Clp, N... 93 2e-17 gi|50233868|ref|NP_055771.3| hypothetical protein LOC22897 [Homo... 92 3e-17 gi|54308345|ref|YP_129365.1| Putative ATP-dependent Clp protease... 92 3e-17 gi|55588008|ref|XP_524843.1| PREDICTED: similar to Ski oncogene ... 92 3e-17 gi|56784088|dbj|BAD81417.1| putative trithorax 3 [Oryza sativa (... 91 4e-17 gi|29029074|gb|AAO64916.1| At5g53430 [Arabidopsis thaliana] 91 6e-17 Sequences not found previously or not previously below threshold: gi|49240131|emb|CAF26578.1| ATP-dependent clp protease, ATP-bind... 167 5e-40 gi|49476075|ref|YP_034116.1| ATP-dependent clp protease, ATP-bin... 167 6e-40 gi|71024695|ref|XP_762577.1| hypothetical protein UM06430.1 [Ust... 135 2e-30 gi|57228420|gb|AAW44877.1| chaperone, putative [Cryptococcus neo... 127 7e-28 gi|44889002|sp|P31540|HSP98_NEUCR Heat shock protein HSP98 127 8e-28 gi|23494372|dbj|BAC19339.1| putative endopeptidase Clp ATP-bindi... 126 2e-27 gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana] 125 2e-27 gi|46400003|emb|CAF23452.1| probable endopeptidase Clp ATP-bindi... 122 2e-26 gi|461753|sp|P35100|CLPA_PEA ATP-dependent Clp protease ATP-bind... 121 4e-26 gi|12045215|ref|NP_073026.1| ATP-dependent Clp protease, ATPase ... 119 2e-25 gi|54022379|ref|YP_116621.1| putative Clp protease [Nocardia far... 119 2e-25 gi|50923949|ref|XP_472335.1| OSJNBa0039C07.4 [Oryza sativa (japo... 118 3e-25 gi|1673983|gb|AAB95959.1| ATP-dependent protease binding subunit... 118 3e-25 gi|68262963|emb|CAI36451.1| ATP-dependent Clp protease [Coryneba... 118 4e-25 gi|37521633|ref|NP_925010.1| endopeptidase Clp ATP-binding chain... 118 4e-25 gi|2493732|sp|P71404|CLPB_HELPY Chaperone clpB 118 5e-25 gi|27467205|ref|NP_763842.1| endopeptidase [Staphylococcus epide... 118 5e-25 gi|50955646|ref|YP_062934.1| ATP-dependent Clp protease, ATP-bin... 117 6e-25 gi|38234547|ref|NP_940314.1| ATP-dependent Clp protease ATP-bind... 117 6e-25 gi|16331384|ref|NP_442112.1| ATP-dependent Clp protease regulato... 116 1e-24 gi|66870181|gb|EAL97546.1| UvrB/UvrC protein:AAA ATPase, central... 116 1e-24 gi|72163275|ref|YP_290932.1| ATPase [Thermobifida fusca YX] 116 2e-24 gi|228154|prf||1717391A protein Hsp104 116 2e-24 gi|41326857|emb|CAF20701.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 115 2e-24 gi|13357952|ref|NP_078226.1| ATP-dependent serine proteinase - h... 115 2e-24 gi|33632641|emb|CAE07453.1| endopeptidase Clp ATP-binding chain ... 115 2e-24 gi|71675077|ref|ZP_00672823.1| UvrB/UvrC protein:AAA ATPase, cen... 115 3e-24 gi|68268640|ref|ZP_00574909.1| UvrB/UvrC protein:AAA ATPase, cen... 114 4e-24 gi|71367651|ref|ZP_00658171.1| UvrB/UvrC protein:AAA ATPase, cen... 114 4e-24 gi|71071100|ref|XP_768118.1| heat shock protein [Giardia lamblia... 114 5e-24 gi|23336357|ref|ZP_00121578.1| COG0542: ATPases with chaperone a... 114 5e-24 gi|28572245|ref|NP_789025.1| putative Clp-family ATP-binding pro... 114 6e-24 gi|67874974|ref|ZP_00504525.1| UvrB/UvrC protein:AAA ATPase, cen... 114 7e-24 gi|71149796|ref|ZP_00648718.1| AAA ATPase, central region:Clp, N... 114 7e-24 gi|17132093|dbj|BAB74698.1| endopeptidase Clp ATP-binding chain ... 114 7e-24 gi|22294028|dbj|BAC07860.1| ATP-dependent Clp protease regulator... 113 8e-24 gi|4105131|gb|AAD02267.1| ClpC protease [Spinacia oleracea] 113 9e-24 gi|50554163|ref|XP_504490.1| hypothetical protein [Yarrowia lipo... 113 9e-24 gi|67985140|gb|EAM73105.1| UvrB/UvrC protein:AAA ATPase, central... 113 1e-23 gi|6466400|gb|AAF12982.1| unknown; Clp protease ATP binding subu... 113 2e-23 gi|51894268|ref|YP_076959.1| class III stress response-related A... 111 3e-23 gi|73663540|ref|YP_302321.1| putative stress response-related Cl... 111 3e-23 gi|399213|sp|P31542|CLAB_LYCES ATP-dependent Clp protease ATP-bi... 111 4e-23 gi|33240557|ref|NP_875499.1| ATPase with chaperone activity ATP-... 111 4e-23 gi|33861644|ref|NP_893205.1| ClpC [Prochlorococcus marinus subsp... 111 4e-23 gi|62423737|ref|ZP_00378894.1| COG0542: ATPases with chaperone a... 111 6e-23 AAA_CLPB_203-397_PF00004.17 110 7e-23 gi|70727483|ref|YP_254399.1| endopeptidas Clp ATP-binding chain ... 110 8e-23 gi|72382499|ref|YP_291854.1| ATPase [Prochlorococcus marinus str... 110 8e-23 gi|62734176|gb|AAX96285.1| Clp amino terminal domain, putative [... 110 8e-23 gi|33640781|emb|CAE21236.1| ClpC [Prochlorococcus marinus str. M... 110 1e-22 gi|71893457|ref|YP_278903.1| ATP-dependent protease binding prot... 110 1e-22 gi|62734225|gb|AAX96334.1| Clp amino terminal domain, putative [... 110 1e-22 gi|73749097|ref|YP_308336.1| ATP-dependent Clp protease, ATP-bin... 110 1e-22 gi|29606248|dbj|BAC70311.1| putative ATP-dependent Clp protease ... 109 1e-22 gi|75760630|ref|ZP_00740659.1| Negative regulator of genetic com... 109 1e-22 gi|39982304|gb|AAR33765.1| clpB protein, putative [Geobacter sul... 109 2e-22 AAA_CLPB_203-397_PF00004.17 109 2e-22 AAA_CLPB_201-395_PF00004.17 108 2e-22 gi|31544696|ref|NP_853274.1| Clp [Mycoplasma gallisepticum R] 108 2e-22 AAA_CLPB_203-397_PF00004.17 108 3e-22 gi|30409234|dbj|BAC76183.1| ATP-dependent clp protease ATP-bindi... 108 3e-22 gi|23126880|ref|ZP_00108763.1| COG0542: ATPases with chaperone a... 108 3e-22 AAA_Q5LND5_201-395_PF00004.17 108 4e-22 gi|67677719|ref|ZP_00474444.1| AAA ATPase, central region:Clp, N... 108 5e-22 gi|68209073|ref|ZP_00561139.1| UvrB/UvrC protein:AAA ATPase, cen... 108 5e-22 AAA_Q5NML2_204-398_PF00004.17 107 5e-22 gi|50841767|ref|YP_054994.1| putative Clp-family ATP-binding pro... 107 6e-22 gi|32307598|gb|AAP79204.1| ClpB protease [Bigelowiella natans] 107 7e-22 AAA_Q6ALY6_203-397_PF00004.17 106 9e-22 gi|67920889|ref|ZP_00514408.1| UvrB/UvrC protein:AAA ATPase, cen... 106 1e-21 gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase s... 106 1e-21 AAA_CLPB_203-397_PF00004.17 106 1e-21 gi|32043647|ref|ZP_00140909.1| COG0542: ATPases with chaperone a... 106 1e-21 AAA_Q75GT3_284-478_PF00004.17 106 2e-21 AAA_CLPB_202-396_PF00004.17 106 2e-21 AAA_Q9LF37_277-471_PF00004.17 105 2e-21 AAA_CLPB_202-396_PF00004.17 105 2e-21 gi|23097548|ref|NP_691014.1| ATP-dependent Clp protease [Oceanob... 105 2e-21 AAA_O77222_210-405_PF00004.17 104 4e-21 AAA_CLPB_201-395_PF00004.17 104 4e-21 gi|52001792|gb|AAU21734.1| class III stress response-related ATP... 104 5e-21 AAA_CLPB_203-397_PF00004.17 104 6e-21 AAA_Q25646_211-406_PF00004.17 104 6e-21 gi|56419503|ref|YP_146821.1| ATP-dependent Clp protease [Geobaci... 104 6e-21 gi|68560433|ref|ZP_00599746.1| UvrB/UvrC protein:AAA ATPase, cen... 104 7e-21 AAA_Q6RYQ7_204-398_PF00004.17 103 8e-21 AAA_Q5PA28_202-396_PF00004.17 103 9e-21 AAA_Q9LLI0_289-483_PF00004.17 103 9e-21 gi|71675746|ref|ZP_00673490.1| UvrB/UvrC protein:AAA ATPase, cen... 103 1e-20 gi|47459200|ref|YP_016062.1| ATP-dependent Clp protease, ATPase ... 103 1e-20 gi|53763100|ref|ZP_00163644.2| COG0542: ATPases with chaperone a... 102 1e-20 gi|62734338|gb|AAX96447.1| ATPase, AAA family, putative [Oryza s... 102 2e-20 gi|28212201|ref|NP_783145.1| negative regulator of genetic compe... 102 2e-20 AAA_Q9XEI1_205-399_PF00004.17 102 2e-20 gi|15026259|gb|AAK81126.1| ATPases with chaperone activity clpC,... 102 2e-20 AAA_CLPB_203-397_PF00004.17 102 2e-20 gi|46135092|ref|ZP_00162367.2| COG0542: ATPases with chaperone a... 102 2e-20 gi|10172715|dbj|BAB03822.1| class III stress response-related AT... 102 2e-20 AAA_CLPB_201-395_PF00004.17 102 3e-20 gi|37521111|ref|NP_924488.1| endopeptidase Clp ATP-binding chain... 102 3e-20 gi|26553830|ref|NP_757764.1| ATP-dependent protease binding subu... 101 3e-20 AAA_CLPB_203-397_PF00004.17 101 3e-20 AAA_Q7NIW8_202-395_PF00004.17 101 4e-20 AAA_Q5GTA2_203-397_PF00004.17 101 4e-20 AAA_CLPB_201-381_PF00004.17 101 4e-20 gi|24213091|ref|NP_710572.1| ATPase (clpc) [Leptospira interroga... 101 4e-20 gi|62513420|ref|ZP_00384970.1| COG0542: ATPases with chaperone a... 101 5e-20 gi|46203683|ref|ZP_00051159.2| COG0542: ATPases with chaperone a... 101 5e-20 gi|15606774|ref|NP_214154.1| ATPase subunit of ATP-dependent pro... 101 5e-20 gi|67638450|ref|ZP_00437386.1| COG0542: ATPases with chaperone a... 101 5e-20 AAA_Q9SPH4_204-398_PF00004.17 101 5e-20 AAA_Q7SDI0_128-321_PF00004.17 101 6e-20 gi|68172787|ref|ZP_00546068.1| UvrB/UvrC protein:AAA ATPase, cen... 101 6e-20 gi|23473480|ref|ZP_00128776.1| COG0542: ATPases with chaperone a... 100 7e-20 gi|18146107|dbj|BAB82147.1| ClpC adenosine triphosphatase [Clost... 100 7e-20 AAA_Q5BE67_125-318_PF00004.17 100 7e-20 AAA_Q6G134_202-396_PF00004.17 100 8e-20 gi|4981954|gb|AAD36462.1| ATP-dependent Clp protease, ATPase sub... 100 9e-20 gi|15458317|gb|AAK99529.1| ATP dependent protease [Streptococcus... 100 9e-20 AAA_Q7U7P3_206-399_PF00004.17 100 9e-20 gi|76163351|gb|EAO57534.1| AAA ATPase, central region:Clp, N ter... 100 9e-20 gi|32444984|emb|CAD74986.1| negative regulator of genetic compet... 100 1e-19 gi|68056364|ref|ZP_00540488.1| UvrB/UvrC protein:AAA ATPase, cen... 100 1e-19 gi|62515994|ref|ZP_00387365.1| COG0542: ATPases with chaperone a... 100 2e-19 gi|14495033|emb|CAC42150.1| putative chaperone [Streptomyces coe... 100 2e-19 AAA_CLPB_197-391_PF00004.17 100 2e-19 gi|24379042|ref|NP_720997.1| ATP-dependent protease ClpE [Strept... 99 2e-19 AAA_O00828_200-394_PF00004.17 99 2e-19 gi|22536667|ref|NP_687518.1| ATP-dependent Clp protease, ATP-bin... 99 2e-19 AAA_CLPB_202-397_PF00004.17 99 2e-19 AAA_CLPB_199-393_PF00004.17 99 2e-19 gi|29840119|ref|NP_829225.1| ATP-dependent Clp protease, ATP-bin... 99 2e-19 gi|68195609|gb|EAN10049.1| UvrB/UvrC protein:AAA ATPase, central... 99 3e-19 AAA_CLPB_199-393_PF00004.17 99 3e-19 gi|5921798|sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-b... 99 3e-19 gi|19748664|gb|AAL98096.1| putative ATP-dependent protease [Stre... 98 4e-19 gi|56961903|ref|YP_173625.1| ATP-dependent Clp protease ATP-bind... 98 4e-19 gi|14194530|sp|Q9PKA8|CLPC_CHLMU Probable ATP-dependent Clp prot... 98 4e-19 gi|68003568|ref|ZP_00536114.1| AAA ATPase, central region:Clp, N... 98 5e-19 gi|33239685|ref|NP_874627.1| ATPases with chaperone activity, AT... 98 5e-19 AAA_CLPB_199-393_PF00004.17 98 5e-19 gi|28897788|ref|NP_797393.1| ATP-dependent Clp protease, ATP-bin... 98 5e-19 gi|46400786|emb|CAF24235.1| probable endopeptidase ATP-binding c... 98 5e-19 gi|76165587|gb|EAO59719.1| AAA ATPase, central region:Clp, N ter... 98 5e-19 AAA_CLPB2_202-397_PF00004.17 98 6e-19 gi|48871265|ref|ZP_00323981.1| COG0542: ATPases with chaperone a... 98 7e-19 gi|52003130|gb|AAU23072.1| ATP-dependent Clp protease-like (clas... 98 7e-19 gi|3218360|emb|CAA19619.1| clp protease ATP binding subunit [Str... 98 7e-19 gi|30841496|gb|AAP34402.1| CDC42-binding protein kinase beta [Mu... 97 8e-19 gi|15487810|gb|AAL00952.1| chaperone ATP-dependent protease [Lac... 97 8e-19 AAA_CLPB_201-394_PF00004.17 97 8e-19 gi|28869739|ref|NP_792358.1| clpB protein, putative [Pseudomonas... 97 9e-19 AAA_CLPB_201-394_PF00004.17 97 1e-18 gi|73748009|ref|YP_307248.1| ATP-dependent Clp protease, ATP-bin... 97 1e-18 gi|62526947|ref|ZP_00388255.1| COG0542: ATPases with chaperone a... 97 1e-18 gi|48788396|ref|ZP_00284375.1| COG0542: ATPases with chaperone a... 97 1e-18 AAA_HSP78_128-322_PF00004.17 97 1e-18 gi|26990034|ref|NP_745459.1| chaperone-associated ATPase, putati... 96 1e-18 gi|50589882|ref|ZP_00331357.1| COG0542: ATPases with chaperone a... 96 1e-18 AAA_Q8XHP1_209-402_PF00004.17 96 1e-18 gi|59711606|ref|YP_204382.1| ATP-dependent protease subunit [Vib... 96 1e-18 gi|1314297|gb|AAC44446.1| ClpC ATPase 96 2e-18 gi|33236295|gb|AAP98384.1| class III stress response-related ATP... 96 2e-18 AAA_Q6FJ65_115-307_PF00004.17 96 2e-18 gi|18203438|sp|Q9S5Z2|CLPE_LACLC ATP-dependent Clp protease ATP-... 96 2e-18 gi|511145|emb|CAA51655.1| hemolysin [Brachyspira hyodysenteriae] 96 2e-18 gi|23480959|gb|EAA17380.1| clpB protein [Plasmodium yoelii yoelii] 96 2e-18 gi|22255857|gb|AAM94782.1| CalR4 [Micromonospora echinospora] 96 2e-18 AAA_Q97EC4_207-400_PF00004.17 96 2e-18 AAA_Q25317_200-394_PF00004.17 95 3e-18 gi|4980695|gb|AAD35290.1| ATP-dependent Clp protease, ATPase sub... 95 3e-18 gi|45436048|gb|AAS61604.1| putative ATPase subunit of ATP-depend... 95 3e-18 AAA_Q85G08_202-395_PF00004.17 95 4e-18 AAA_CLPB_199-393_PF00004.17 95 4e-18 gi|37524374|ref|NP_927718.1| hypothetical protein plu0363 [Photo... 95 4e-18 gi|28378034|ref|NP_784926.1| ATP-dependent Clp protease, ATP-bin... 95 4e-18 AAA_O69287_202-395_PF00004.17 95 4e-18 gi|69933402|ref|ZP_00628604.1| AAA ATPase, central region:Clp, N... 95 5e-18 gi|75187548|ref|ZP_00700815.1| COG0542: ATPases with chaperone a... 95 5e-18 gi|67984753|gb|EAM72758.1| UvrB/UvrC protein:AAA ATPase, central... 95 5e-18 gi|56459783|ref|YP_155064.1| ATP-binding subunit of Clp protease... 94 7e-18 gi|48864977|ref|ZP_00318845.1| COG0542: ATPases with chaperone a... 94 7e-18 gi|75229800|ref|ZP_00716327.1| COG0542: ATPases with chaperone a... 94 8e-18 gi|73964054|ref|XP_547990.2| PREDICTED: similar to CDC42-binding... 94 8e-18 gi|3859855|gb|AAC78611.1| intersectin long form [Homo sapiens] 94 8e-18 gi|66870923|gb|EAL98287.1| UvrB/UvrC protein:AAA ATPase, central... 94 8e-18 gi|75189312|ref|ZP_00702579.1| COG0542: ATPases with chaperone a... 94 9e-18 gi|54307876|ref|YP_128896.1| putative ATPase with chaperone acti... 94 1e-17 gi|52858081|ref|ZP_00046852.2| COG0542: ATPases with chaperone a... 93 1e-17 gi|23025097|ref|ZP_00064272.1| COG0542: ATPases with chaperone a... 93 1e-17 AAA_Q5BF22_219-415_PF00004.17 93 1e-17 AAA_Q7NKD6_211-405_PF00004.17 93 1e-17 gi|51597920|ref|YP_072111.1| Clp ATPase [Yersinia pseudotubercul... 93 2e-17 gi|9655617|gb|AAF94303.1| ATP-dependent Clp protease, ATP-bindin... 93 2e-17 gi|22127238|ref|NP_670661.1| putative protease [Yersinia pestis ... 93 2e-17 gi|68194693|gb|EAN09176.1| UvrB/UvrC protein:AAA ATPase, central... 93 2e-17 AAA_Q8F906_213-406_PF00004.17 93 2e-17 gi|73964058|ref|XP_868606.1| PREDICTED: similar to Cdc42 binding... 93 2e-17 gi|37680506|ref|NP_935115.1| ATP-dependent Clp protease, ATP-bin... 92 2e-17 gi|27361601|gb|AAO10508.1| ATP-dependent Clp protease [Vibrio vu... 92 3e-17 gi|67916618|ref|ZP_00510321.1| AAA ATPase, central region [Clost... 92 3e-17 AAA_Q9KGG2_205-398_PF00004.17 92 3e-17 gi|48860810|ref|ZP_00314719.1| COG0542: ATPases with chaperone a... 92 3e-17 AAA_Q5N2M7_217-410_PF00004.17 92 4e-17 AAA_Q5R0C4_211-405_PF00004.17 91 4e-17 gi|62512777|ref|ZP_00384381.1| COG0542: ATPases with chaperone a... 91 4e-17 gi|75241718|ref|ZP_00725555.1| COG0542: ATPases with chaperone a... 91 5e-17 gi|56679738|gb|AAV96404.1| ATP-dependent Clp protease, ATP-bindi... 91 5e-17 gi|46580013|ref|YP_010821.1| ATP-dependent Clp protease, ATP-bin... 91 5e-17 gi|28377823|ref|NP_784715.1| ATP-dependent Clp protease, ATP-bin... 91 6e-17 >gi|8777406|dbj|BAA96996.1| unnamed protein product [Arabidopsis thaliana] Length = 574 Score = 553 bits (1426), Expect = e-156 Identities = 342/486 (70%), Positives = 391/486 (80%), Gaps = 10/486 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DSMEQ NV HVSNAD+VS+RDIARERV++VAERMHRLPDEFL+ELK GL++ILEGN A Sbjct: 73 DSMEQTVNVMHHVSNADKVSVRDIARERVELVAERMHRLPDEFLDELKNGLKSILEGNVA 132 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQSR+DL+S TLV+AHRVQLEILVAINTGIQAFLHPNISLSQ SLIEI Sbjct: 133 QSVDEFMFLQKVVQSRTDLSSVTLVRAHRVQLEILVAINTGIQAFLHPNISLSQPSLIEI 192 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPADDC CDIC+N+KGFCNLCMC IC+KFDF+ NTCRWIGCD+CSH Sbjct: 193 FVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTCRWIGCDLCSH 252 Query: 181 WCHTDCAIREGLIKMGHSAKGA-SGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFE 239 W HTDCAIR+G I G SAK SG E++F C ACN TSEL G+VKDVFQHCAPNWD E Sbjct: 253 WTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRTSELLGWVKDVFQHCAPNWDRE 312 Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 +L+KELDFV +IFRGSED RG+KLFWK +ELI+K+K L + A ILMFFQE +SDS Sbjct: 313 SLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIKGGLAEA-TAAKLILMFFQEIESDS 371 Query: 300 -PSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED 358 S ENGEGG L+APQDACN IAEVVQ+T RKME+VAEEKMRMFKKAR L+ CDRELED Sbjct: 372 AKSFENGEGGRLMAPQDACNRIAEVVQETLRKMEIVAEEKMRMFKKARMALETCDRELED 431 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 KA V++LK ERQKKK QI+ELE IVRLKQAEADMFQLKA+EA+REA+ Sbjct: 432 KAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMDK 491 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC-------DFDPMKMRMESEIRGLL 471 Y S YLK RLSEAE +QYLFE++K QENS+ DP ++ M S+IR LL Sbjct: 492 SEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRVASQSSGGGGDPSQVMMYSKIRDLL 551 Query: 472 KGMEMT 477 +G ++ Sbjct: 552 QGYNLS 557 >gi|6466960|gb|AAF13095.1| unknown protein [Arabidopsis thaliana] Length = 566 Score = 547 bits (1409), Expect = e-154 Identities = 332/478 (69%), Positives = 386/478 (80%), Gaps = 4/478 (0%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +Q +V RHVS AD+VSLRDIARER+D+VAERMHRLP+E+LEELK GL+AILEGNGA Sbjct: 74 DSHDQ--HVIRHVSIADKVSLRDIARERLDIVAERMHRLPEEYLEELKNGLKAILEGNGA 131 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQ+RSDLTS+TLV+AHRVQLE+LV INTGIQAFLHPNI+LSQSSLIEI Sbjct: 132 QPIDEFMFLQKFVQTRSDLTSKTLVRAHRVQLEVLVVINTGIQAFLHPNINLSQSSLIEI 191 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPAD C C+IC+N+KGFCNLCMCVIC+KFDFA NTCRWIGCDVCSH Sbjct: 192 FVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTCRWIGCDVCSH 251 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 W HTDCAIR+G I MG S K SGM EMLF C ACNHTSEL G+VKDVFQHCAPNWD E+ Sbjct: 252 WTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRES 311 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L+KELDFV +IFRGSED RG+KLFWK +EL+EK+K L + A ILMFFQE + DSP Sbjct: 312 LMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGGLAEA-TAAKLILMFFQEIELDSP 370 Query: 301 -SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK 359 SLE+GEGG IAPQDACN IAEVV++T RKME+V EEK RM+KKAR L+ C+RE+E+K Sbjct: 371 KSLESGEGGGTIAPQDACNRIAEVVKETLRKMEIVGEEKTRMYKKARMGLEECEREVEEK 430 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A V +L+MERQKKK QIEE+E IVRLKQAEA+MFQLKA+EA+ EAE Sbjct: 431 AKQVAELQMERQKKKQQIEEVERIVRLKQAEAEMFQLKANEAKVEAERLERIVKAKKEKT 490 Query: 420 XXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 Y S YLKLRLSEAE ++YLFE++K QE+ + + M S+IR +L G + Sbjct: 491 EEEYASNYLKLRLSEAEAEKEYLFEKIKEQESGGNGGEASQAVMYSKIREMLHGYNAS 548 >DUF1423_Q9LUB7_73-557_PF07227.1 Length = 485 Score = 540 bits (1393), Expect = e-152 Identities = 342/486 (70%), Positives = 391/486 (80%), Gaps = 10/486 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DSMEQ NV HVSNAD+VS+RDIARERV++VAERMHRLPDEFL+ELK GL++ILEGN A Sbjct: 1 DSMEQTVNVMHHVSNADKVSVRDIARERVELVAERMHRLPDEFLDELKNGLKSILEGNVA 60 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQSR+DL+S TLV+AHRVQLEILVAINTGIQAFLHPNISLSQ SLIEI Sbjct: 61 QSVDEFMFLQKVVQSRTDLSSVTLVRAHRVQLEILVAINTGIQAFLHPNISLSQPSLIEI 120 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPADDC CDIC+N+KGFCNLCMC IC+KFDF+ NTCRWIGCD+CSH Sbjct: 121 FVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTCRWIGCDLCSH 180 Query: 181 WCHTDCAIREGLIKMGHSAKGA-SGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFE 239 W HTDCAIR+G I G SAK SG E++F C ACN TSEL G+VKDVFQHCAPNWD E Sbjct: 181 WTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRTSELLGWVKDVFQHCAPNWDRE 240 Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 +L+KELDFV +IFRGSED RG+KLFWK +ELI+K+K L + A ILMFFQE +SDS Sbjct: 241 SLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIKGGLAEA-TAAKLILMFFQEIESDS 299 Query: 300 -PSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED 358 S ENGEGG L+APQDACN IAEVVQ+T RKME+VAEEKMRMFKKAR L+ CDRELED Sbjct: 300 AKSFENGEGGRLMAPQDACNRIAEVVQETLRKMEIVAEEKMRMFKKARMALETCDRELED 359 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 KA V++LK ERQKKK QI+ELE IVRLKQAEADMFQLKA+EA+REA+ Sbjct: 360 KAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMDK 419 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC-------DFDPMKMRMESEIRGLL 471 Y S YLK RLSEAE +QYLFE++K QENS+ DP ++ M S+IR LL Sbjct: 420 SEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRVASQSSGGGGDPSQVMMYSKIRDLL 479 Query: 472 KGMEMT 477 +G ++ Sbjct: 480 QGYNLS 485 >DUF1423_Q9S736_74-548_PF07227.1 Length = 475 Score = 528 bits (1360), Expect = e-148 Identities = 332/478 (69%), Positives = 386/478 (80%), Gaps = 4/478 (0%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +Q +V RHVS AD+VSLRDIARER+D+VAERMHRLP+E+LEELK GL+AILEGNGA Sbjct: 1 DSHDQ--HVIRHVSIADKVSLRDIARERLDIVAERMHRLPEEYLEELKNGLKAILEGNGA 58 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQ+RSDLTS+TLV+AHRVQLE+LV INTGIQAFLHPNI+LSQSSLIEI Sbjct: 59 QPIDEFMFLQKFVQTRSDLTSKTLVRAHRVQLEVLVVINTGIQAFLHPNINLSQSSLIEI 118 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPAD C C+IC+N+KGFCNLCMCVIC+KFDFA NTCRWIGCDVCSH Sbjct: 119 FVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTCRWIGCDVCSH 178 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 W HTDCAIR+G I MG S K SGM EMLF C ACNHTSEL G+VKDVFQHCAPNWD E+ Sbjct: 179 WTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRES 238 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L+KELDFV +IFRGSED RG+KLFWK +EL+EK+K L + A ILMFFQE + DSP Sbjct: 239 LMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGGLAEA-TAAKLILMFFQEIELDSP 297 Query: 301 -SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK 359 SLE+GEGG IAPQDACN IAEVV++T RKME+V EEK RM+KKAR L+ C+RE+E+K Sbjct: 298 KSLESGEGGGTIAPQDACNRIAEVVKETLRKMEIVGEEKTRMYKKARMGLEECEREVEEK 357 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A V +L+MERQKKK QIEE+E IVRLKQAEA+MFQLKA+EA+ EAE Sbjct: 358 AKQVAELQMERQKKKQQIEEVERIVRLKQAEAEMFQLKANEAKVEAERLERIVKAKKEKT 417 Query: 420 XXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 Y S YLKLRLSEAE ++YLFE++K QE+ + + M S+IR +L G + Sbjct: 418 EEEYASNYLKLRLSEAEAEKEYLFEKIKEQESGGNGGEASQAVMYSKIREMLHGYNAS 475 >gi|30385713|gb|AAP22955.1| Potyvirus VPg interacting protein [Pisum sativum] Length = 513 Score = 521 bits (1342), Expect = e-146 Identities = 321/471 (68%), Positives = 367/471 (77%), Gaps = 5/471 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R VS+AD +SL+DIARERVDV+ +RMHRLPDEFL+ELK GLRAILEG NG+Q +DEF Sbjct: 24 SVIRRVSSADRISLQDIARERVDVICDRMHRLPDEFLDELKNGLRAILEGGNGSQHRDEF 83 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 LQK VQSRSDLT++TL++AHRVQLEILV+INTGIQ FLHP+ISLSQ+SLIEIFLYKRC Sbjct: 84 FILQKLVQSRSDLTAKTLIRAHRVQLEILVSINTGIQGFLHPSISLSQTSLIEIFLYKRC 143 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIACQN LPAD+C D C+N GFCNLCMCVICSKFDF NTCRWIGCD+ SHW HTDC Sbjct: 144 RNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLXSHWTHTDC 203 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AIRE LI MG S K SG +EM+F C AC+ TS L G+VKDVFQHCAP+WD +ALI+ELD Sbjct: 204 AIREQLICMGPSVKSGSGPSEMVFRCQACSXTSXLLGWVKDVFQHCAPSWDGDALIRELD 263 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 FV +IF GS+D RG LFWK D+L EKLKS+ +D AC ILM FQE D D S SLEN Sbjct: 264 FVSRIFHGSKDQRGMNLFWKCDDLKEKLKSRKMDSKAACRAILMVFQELDLDNSKSLENA 323 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 E G LIAPQ+ACN IAEVVQ+ RKME VA+EKMRMFKKAR ++ACDREL DKA D Sbjct: 324 ESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARIAVEACDRELADKAREAGD 383 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LK+ERQKKK QIEELE IVRLK AEADMFQLKA+EA+REAE YTS Sbjct: 384 LKVERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTS 443 Query: 426 KYLKLRLSEAEERRQYLFEELKAQEN---SQCDFDPMKMRMESEIRGLLKG 473 YLK +LSEAE +QYL+E++K QE+ SQ DP M M S+I LL Sbjct: 444 NYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLLYN 494 >DUF1423_Q84N37_19-496_PF07227.1 Length = 478 Score = 514 bits (1325), Expect = e-144 Identities = 321/471 (68%), Positives = 367/471 (77%), Gaps = 5/471 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R VS+AD +SL+DIARERVDV+ +RMHRLPDEFL+ELK GLRAILEG NG+Q +DEF Sbjct: 6 SVIRRVSSADRISLQDIARERVDVICDRMHRLPDEFLDELKNGLRAILEGGNGSQHRDEF 65 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 LQK VQSRSDLT++TL++AHRVQLEILV+INTGIQ FLHP+ISLSQ+SLIEIFLYKRC Sbjct: 66 FILQKLVQSRSDLTAKTLIRAHRVQLEILVSINTGIQGFLHPSISLSQTSLIEIFLYKRC 125 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIACQN LPAD+C D C+N GFCNLCMCVICSKFDF NTCRWIGCD+ SHW HTDC Sbjct: 126 RNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLXSHWTHTDC 185 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AIRE LI MG S K SG +EM+F C AC+ TS L G+VKDVFQHCAP+WD +ALI+ELD Sbjct: 186 AIREQLICMGPSVKSGSGPSEMVFRCQACSXTSXLLGWVKDVFQHCAPSWDGDALIRELD 245 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 FV +IF GS+D RG LFWK D+L EKLKS+ +D AC ILM FQE D D S SLEN Sbjct: 246 FVSRIFHGSKDQRGMNLFWKCDDLKEKLKSRKMDSKAACRAILMVFQELDLDNSKSLENA 305 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 E G LIAPQ+ACN IAEVVQ+ RKME VA+EKMRMFKKAR ++ACDREL DKA D Sbjct: 306 ESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARIAVEACDRELADKAREAGD 365 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LK+ERQKKK QIEELE IVRLK AEADMFQLKA+EA+REAE YTS Sbjct: 366 LKVERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTS 425 Query: 426 KYLKLRLSEAEERRQYLFEELKAQEN---SQCDFDPMKMRMESEIRGLLKG 473 YLK +LSEAE +QYL+E++K QE+ SQ DP M M S+I LL Sbjct: 426 NYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLLYN 476 >gi|30385711|gb|AAP22954.1| Potyvirus VPg interacting protein [Nicotiana benthamiana] Length = 549 Score = 505 bits (1301), Expect = e-141 Identities = 306/475 (64%), Positives = 366/475 (77%), Gaps = 10/475 (2%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R++SN+D++SLRDIARERVDV+AERM LPDE+LE+ K LR ILEG GAQ ++EF Sbjct: 77 SVVRNISNSDKMSLRDIARERVDVIAERMRNLPDEYLEKFKHELRVILEGLGGAQHREEF 136 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 +FLQ+ V SR DLT TL+ HR QLEILVAI TGIQAFLHP++SLSQ+SLI+IFLYKRC Sbjct: 137 LFLQRLVNSRGDLTDGTLIITHRTQLEILVAIKTGIQAFLHPSVSLSQASLIDIFLYKRC 196 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIAC ++LPA++C C+IC+ K GFCNLCMCVIC KFDF N+CRWIGCD+CSHW HTDC Sbjct: 197 RNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGCDLCSHWTHTDC 256 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AI G I G S K + E LF C AC+ TSEL G+VKDVFQHCAP+WD EA ++ELD Sbjct: 257 AISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLGWVKDVFQHCAPSWDAEAFVRELD 316 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 +VR+IF+ SEDARG+KLFWK +ELIEKLK+ + DP+ AC IL FFQE D D S S +N Sbjct: 317 YVRRIFQRSEDARGRKLFWKCEELIEKLKNGVADPM-ACKVILSFFQELDVDPSKSQDND 375 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EGG LIAP++A N+IA+VVQ+ RKME VAEEKMRM KKAR LDACD+EL+DKA VT Sbjct: 376 EGGRLIAPEEAFNKIADVVQEAIRKMEAVAEEKMRMVKKARLALDACDQELKDKAREVTS 435 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LKMERQ+KK QI+ELESIVRLKQAEADMF LKA EARREAE Y S Sbjct: 436 LKMERQRKKQQIDELESIVRLKQAEADMFDLKAGEARREAERLQRIALAKTEKSEEDYAS 495 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQCD------FDPMKMRMESEIRGLLKGM 474 +YLK RLSEAE +QYLFE++K QE+S+ DP +M M S+I+ L+K M Sbjct: 496 RYLKQRLSEAEAEKQYLFEKIKLQESSRASQSSAGGNDPSQM-MYSKIQDLIKNM 549 >DUF1423_Q84N38_72-549_PF07227.1 Length = 478 Score = 498 bits (1284), Expect = e-140 Identities = 306/475 (64%), Positives = 366/475 (77%), Gaps = 10/475 (2%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R++SN+D++SLRDIARERVDV+AERM LPDE+LE+ K LR ILEG GAQ ++EF Sbjct: 6 SVVRNISNSDKMSLRDIARERVDVIAERMRNLPDEYLEKFKHELRVILEGLGGAQHREEF 65 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 +FLQ+ V SR DLT TL+ HR QLEILVAI TGIQAFLHP++SLSQ+SLI+IFLYKRC Sbjct: 66 LFLQRLVNSRGDLTDGTLIITHRTQLEILVAIKTGIQAFLHPSVSLSQASLIDIFLYKRC 125 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIAC ++LPA++C C+IC+ K GFCNLCMCVIC KFDF N+CRWIGCD+CSHW HTDC Sbjct: 126 RNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGCDLCSHWTHTDC 185 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AI G I G S K + E LF C AC+ TSEL G+VKDVFQHCAP+WD EA ++ELD Sbjct: 186 AISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLGWVKDVFQHCAPSWDAEAFVRELD 245 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 +VR+IF+ SEDARG+KLFWK +ELIEKLK+ + DP+ AC IL FFQE D D S S +N Sbjct: 246 YVRRIFQRSEDARGRKLFWKCEELIEKLKNGVADPM-ACKVILSFFQELDVDPSKSQDND 304 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EGG LIAP++A N+IA+VVQ+ RKME VAEEKMRM KKAR LDACD+EL+DKA VT Sbjct: 305 EGGRLIAPEEAFNKIADVVQEAIRKMEAVAEEKMRMVKKARLALDACDQELKDKAREVTS 364 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LKMERQ+KK QI+ELESIVRLKQAEADMF LKA EARREAE Y S Sbjct: 365 LKMERQRKKQQIDELESIVRLKQAEADMFDLKAGEARREAERLQRIALAKTEKSEEDYAS 424 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQCD------FDPMKMRMESEIRGLLKGM 474 +YLK RLSEAE +QYLFE++K QE+S+ DP +M M S+I+ L+K M Sbjct: 425 RYLKQRLSEAEAEKQYLFEKIKLQESSRASQSSAGGNDPSQM-MYSKIQDLIKNM 478 >gi|8778236|gb|AAF79245.1| F10B6.14 [Arabidopsis thaliana] Length = 760 Score = 491 bits (1264), Expect = e-137 Identities = 231/481 (48%), Positives = 302/481 (62%), Gaps = 14/481 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 285 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 342 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 343 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 402 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 403 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 462 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 463 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 522 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF S Sbjct: 523 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNCKFLIST 582 Query: 301 SLENGEGGF----LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 + F L++ A E + D R++ V AE R K SV + ++ Sbjct: 583 CIRFYRLKFDYILLLSQFLADAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQ 640 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 + K+ A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 641 KKKSFALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKT 694 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+ Sbjct: 695 EKMEEEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEV 754 Query: 477 T 477 T Sbjct: 755 T 755 >gi|20148719|gb|AAM10250.1| unknown protein [Arabidopsis thaliana] Length = 733 Score = 472 bits (1214), Expect = e-131 Identities = 227/477 (47%), Positives = 295/477 (61%), Gaps = 33/477 (6%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 285 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 342 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 343 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 402 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 403 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 462 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 463 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 522 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF Sbjct: 523 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFN------- 575 Query: 301 SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA 360 E + D R++ V AE R K SV + ++ + K+ Sbjct: 576 ----------------YAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQKKKS 617 Query: 361 CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXX 420 A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 618 FALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKTEKME 671 Query: 421 XXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+T Sbjct: 672 EEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEVT 728 >DUF1423_Q9LQV7_285-755_PF07227.1 Length = 471 Score = 458 bits (1180), Expect = e-127 Identities = 231/481 (48%), Positives = 302/481 (62%), Gaps = 14/481 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 1 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 58 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 59 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 118 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 119 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 178 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 179 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 238 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF S Sbjct: 239 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNCKFLIST 298 Query: 301 SLENGEGGF----LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 + F L++ A E + D R++ V AE R K SV + ++ Sbjct: 299 CIRFYRLKFDYILLLSQFLADAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQ 356 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 + K+ A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 357 KKKSFALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKT 410 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+ Sbjct: 411 EKMEEEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEV 470 Query: 477 T 477 T Sbjct: 471 T 471 >gi|28973711|gb|AAO64172.1| unknown protein [Arabidopsis thaliana] Length = 975 Score = 440 bits (1132), Expect = e-122 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 514 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 571 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 572 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 631 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 632 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 691 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 692 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 751 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 752 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 809 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQK-KKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 810 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 868 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 869 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 928 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 929 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 969 >gi|7573333|emb|CAB87803.1| putative protein [Arabidopsis thaliana] Length = 1162 Score = 433 bits (1114), Expect = e-120 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 701 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 758 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 759 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 818 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 819 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 878 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 879 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 938 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 939 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 996 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQK-KKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 997 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 1055 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 1056 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 1115 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 1116 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 1156 >DUF1423_Q84TI3_497-969_PF07227.1 Length = 473 Score = 416 bits (1070), Expect = e-115 Identities = 218/461 (47%), Positives = 295/461 (63%), Gaps = 6/461 (1%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 18 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 75 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 76 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 135 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 136 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 195 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 196 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 255 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 256 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 313 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQK-KKPQ 376 +E QDTA V ++ K++ SV DA RE + + CAV ++++ER K+P+ Sbjct: 314 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAV-EMELERGSPKEPR 372 Query: 377 IEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+ Sbjct: 373 FEELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQ 432 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 ERR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 433 ERRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 473 >gi|68172762|ref|ZP_00546043.1| AAA ATPase, central region:Clp, N terminal [Frankia sp. CcI3] Length = 869 Score = 193 bits (492), Expect = 7e-48 Identities = 46/266 (17%), Positives = 87/266 (32%), Gaps = 20/266 (7%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + + +I +D + + ++ + + Sbjct: 256 EFEERLTSVLNEIREAEGQIITFIDELHTVVGAGAAEGAMDAGNMLKPMLARGELRMIGA 315 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ P++E+ G ++ E+ V+ T + Sbjct: 316 TTLEEYRTRIEKDPALERRFQPVLVGEPTVEDTIG--ILRGLKERYEVHHGVRITDTALV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A + L+ME + I+ELE VR + E Sbjct: 374 AAATLSDRYVTARFLPDKAID--LVD--EAASRLRMEIDSRPVAIDELERAVRRLEIEDM 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + DEA RE T+++ K +SE ++ ++ L +A E Sbjct: 430 ALSKENDEASRERRGRLQRELADRREELSSLTARWHREKDSISEVQKIKEELENARRAVE 489 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGM 474 ++ D D K I L K + Sbjct: 490 LAERDLDLAKAGELRYGTIPTLEKRL 515 >gi|41326957|emb|CAF20801.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Corynebacterium glutamicum ATCC 13032] Length = 852 Score = 193 bits (490), Expect = 1e-47 Identities = 44/283 (15%), Positives = 83/283 (29%), Gaps = 42/283 (14%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK----------- 275 D+ A + L V +G+ + ++ Sbjct: 242 DLGSMVAGAKYRGEFEERLKAVLDEIKGANGE-VVTFIDELHTIVGAGASGESAMDAGNM 300 Query: 276 ------------------SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 ++ ++ + FQ+ P++E+ G ++ Sbjct: 301 IKPLLARGELRLVGATTLNEYRKYIEKDAALERRFQQVYVGEPTVEDAIG--ILRGLKER 358 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 E+ V+ + AE R A D L D A + L+ME +I Sbjct: 359 YEVHHGVRIQDSALVAAAELSNRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPQEI 414 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----L 432 +ELE IVR + E ++D A +E +++ + + Sbjct: 415 DELERIVRRLEIEEMALSKESDAASKERLEKLRSELADEREKLSELKARWQNEKTAIDDV 474 Query: 433 SEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 E +E + L E E ++R I L K +E Sbjct: 475 REMKEELEALRSESDIAERDGNYGRVAELR-YGRIPELEKQIE 516 >gi|68229264|ref|ZP_00568461.1| AAA ATPase, central region:Clp, N terminal [Frankia sp. EAN1pec] Length = 870 Score = 193 bits (490), Expect = 1e-47 Identities = 47/259 (18%), Positives = 89/259 (34%), Gaps = 30/259 (11%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFI 288 +I +D + + ++ + + ++I ++ + Sbjct: 272 EGQIITFIDELHTVVGAGAAEGAMDAGNMLKPMLARGELRMIGATTLDEYRTRIEKDPAL 331 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ PS+E+ G ++ E+ V+ T + A R Sbjct: 332 ERRFQPVMVGEPSVEDTIG--ILRGLKERYEVHHGVRITDSALVAAATLSDRYV------ 383 Query: 349 LDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 R L DKA A + L+ME + ++ELE VR + E + D+A R Sbjct: 384 ---TARFLPDKAIDLMDEAASRLRMEIDSRPVAVDELERAVRRLEIEDMALSKENDDASR 440 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQENSQCDFDPMKM 461 E T+++ + + +SE ++ ++ L +A E ++ D D K Sbjct: 441 ERRDRLQRELAEKREELSALTARWQREKNSISEVQKIKEELENARRAAEMAERDLDLAKA 500 Query: 462 --RMESEIRGLLKGM-EMT 477 I L K + E T Sbjct: 501 GELRYGTIPTLEKRLAEAT 519 >gi|4098131|gb|AAD00218.1| clpB [Mycobacterium bovis] Length = 877 Score = 190 bits (482), Expect = 1e-46 Identities = 46/254 (18%), Positives = 87/254 (34%), Gaps = 24/254 (9%) Query: 239 EALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKS---------KLIDPLDACNFI 288 +I +D + I G+ ++ + + + ++ + Sbjct: 300 GQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGELRLVGATTLDEYRKHIEKDAAL 359 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ+ PS+E+ G ++ E+ V+ T + A R Sbjct: 360 ERRFQQVYVGEPSVEDTIG--ILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLP 417 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXX 408 A D L D A + L+ME + +I+E+E +VR + E + DEA E Sbjct: 418 DKAID--LVD--EAASRLRMEIDSRPVEIDEVERLVRRLEIEEMALSKEEDEASAERLAK 473 Query: 409 XXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ----ENSQCDFDPMKM--R 462 T+++ + A E + L E+L+A E ++ D D K Sbjct: 474 LRSELADQKEKLAELTTRWQNEK--NAIEIVRDLKEQLEALRGESERAERDGDLAKAAEL 531 Query: 463 MESEIRGLLKGMEM 476 I + K ++ Sbjct: 532 RYGRIPEVEKKLDA 545 >gi|23494457|dbj|BAC19423.1| putative endopeptidase Clp ATP-binding chain B [Corynebacterium efficiens YS-314] Length = 852 Score = 189 bits (481), Expect = 1e-46 Identities = 44/282 (15%), Positives = 80/282 (28%), Gaps = 42/282 (14%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK----------- 275 D+ A + L V +G+ + ++ Sbjct: 242 DLGSMVAGAKYRGEFEERLKAVLDEIKGANGE-IVTFIDELHTIVGAGASGESAMDAGNM 300 Query: 276 ------------------SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 ++ ++ + FQ+ PS+E+ G ++ Sbjct: 301 IKPLLARGELRLVGATTLNEYRKYIEKDTALERRFQQVYVGEPSVEDTVG--ILRGLKER 358 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 E+ V+ + AE R A D L D A + L+ME +I Sbjct: 359 YEVHHGVRIQDSALVAAAELSHRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPQEI 414 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL----- 432 +ELE IVR + E + D A RE +++ + Sbjct: 415 DELERIVRRLEIEEVALTKETDVASRERLERLRSELADEREKLSELKARWQNEKAVIDDV 474 Query: 433 SEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 + +E + L E E ++R I L K + Sbjct: 475 RKFKEELEALRSESDIAEREGDYGRVAELR-YGRIPELEKKI 515 >gi|68537287|ref|ZP_00577067.1| AAA ATPase, central region:Clp, N terminal [Sphingopyxis alaskensis RB2256] Length = 859 Score = 189 bits (481), Expect = 1e-46 Identities = 43/273 (15%), Positives = 83/273 (30%), Gaps = 31/273 (11%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V +I +D + + + + + + I Sbjct: 257 EFEERLKGVLDDVKAAE--GEIILFIDEMHTLVGAGKSEGAMDASNLLKPALARGELHCI 314 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ P++E+ ++ E+ V+ T Sbjct: 315 GATTLDEYRKHVEKDPALQRRFQPVFVGEPTVED--SISILRGIKEKYELHHGVRITDGA 372 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVR 385 + A R DR L DKA A + ++ME + K +IE L+ + Sbjct: 373 IVAAATLSHRYI---------SDRFLPDKAIDLMDEAASRIRMEVESKPEEIETLDRRII 423 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLF 443 + E ++D A ++ T K+ K ++ + ++ L Sbjct: 424 QMKIEEAALGKESDAASKDRLASLQAELANLEQQSAELTQKWQAEKEKIHAEAKIKEELD 483 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 A E +Q D K I L K + Sbjct: 484 AARSALEQAQRAGDLAKAGELSYGTIPALEKRL 516 >gi|41409951|ref|NP_962787.1| ClpB [Mycobacterium avium subsp. paratuberculosis K-10] Length = 848 Score = 188 bits (477), Expect = 3e-46 Identities = 44/252 (17%), Positives = 86/252 (34%), Gaps = 20/252 (7%) Query: 239 EALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFI 288 +I +D + I G+ ++ + + +L+ ++ + Sbjct: 271 GQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGELRLVGATTLDEYRKYIEKDAAL 330 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ+ PS+E+ G ++ E+ V+ T + A R Sbjct: 331 ERRFQQVFVGEPSVEDTVG--ILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLP 388 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXX 408 A D L D A + LKME + +I+E+E +VR + E + DEA +E Sbjct: 389 DKAID--LVD--EAASRLKMEIDSRPVEIDEVERLVRRLEIEEMALAKEEDEASKERLEK 444 Query: 409 XXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQENSQCDFDPMKM--RME 464 T+++ + + E ++ L + ++ D D K Sbjct: 445 LRSELADQKEKLAELTTRWQNEKNAIDVVRELKEQLETLRGESDRAERDGDLAKAAELRY 504 Query: 465 SEIRGLLKGMEM 476 I + K +E Sbjct: 505 GRIPEVEKKLEA 516 >gi|56543894|gb|AAV90048.1| ATP-dependent Clp protease [Zymomonas mobilis subsp. mobilis ZM4] Length = 864 Score = 188 bits (477), Expect = 4e-46 Identities = 36/249 (14%), Positives = 78/249 (31%), Gaps = 19/249 (7%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFIL 289 +I +D + + + + + + ++ ++ + Sbjct: 274 GQIILFIDEMHTLIGAGKSDGAMDAGNLLKPALARGELHCIGATTLAEYQKYVEKDPALQ 333 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ P++E+ ++ E V+ T + A R Sbjct: 334 RRFQPVYVGEPTVEDTI--SILRGLKEKYEAHHGVRITDAALVSAATLSNRYITNRFLPD 391 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A + L+ME K +IE L+ + + E + + D+A R+ Sbjct: 392 KAID--LVD--EAASRLRMEVDSKPEEIENLDRRIIQLKIEREALLKENDDASRDRLATL 447 Query: 410 XXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM--RMES 465 T+++ + ++ ++ L + A E ++ D K Sbjct: 448 EHDLSDLEQQSSELTTRWKNEQDKIKAEARLKEKLDQARIALEQAERSGDLTKAGEISYG 507 Query: 466 EIRGLLKGM 474 I L K + Sbjct: 508 IIPQLEKQL 516 >gi|13472967|ref|NP_104534.1| endopeptidase Clp ATP-binding chain B, clpB [Mesorhizobium loti MAFF303099] Length = 868 Score = 187 bits (475), Expect = 6e-46 Identities = 34/248 (13%), Positives = 82/248 (33%), Gaps = 19/248 (7%) Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDACNFILMF 291 +I +D + + + + + + + ++ + Sbjct: 274 IILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDPALARR 333 Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 FQ D P++E+ ++ E V+ + + A R A Sbjct: 334 FQPVFVDEPTVEDTV--SILRGLKEKYEQHHKVRISDSALVAAATLSNRYIADRFLPDKA 391 Query: 352 CDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXX 411 D L D A + L+M+ K ++E++ + + E + +++ D+A ++ Sbjct: 392 ID--LVD--EAASRLRMQVDSKPEALDEIDRRIMQLKIEREALKVETDDASKDRLVRLEK 447 Query: 412 XXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM--RMESEI 467 T+K+ K +L A + ++ L E +Q + + +I Sbjct: 448 ELVGLEEESTEITAKWQAEKQKLGLAADLKKQLDEARNELAIAQRKGEFQRAGELAYGKI 507 Query: 468 RGLLKGME 475 L K ++ Sbjct: 508 PELEKKLK 515 >gi|17982078|gb|AAL51377.1| ATP-DEPENDENT CLP PROTEASE, ATP-BINDING SUBUNIT CLPB [Brucella melitensis 16M] Length = 931 Score = 187 bits (475), Expect = 6e-46 Identities = 39/268 (14%), Positives = 86/268 (32%), Gaps = 21/268 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V +I +D + + + + + + Sbjct: 312 EFEERLKAVLSEVQTA--AGQIILFIDEMHTLVGAGKTDGAMDASNLLKPALARGELHCV 369 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ + FQ D P++E+ ++ E V+ + Sbjct: 370 GATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTI--SILRGLKEKYEQHHKVRVSDSA 427 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R A D L D A + L+M+ K +++E++ + + E Sbjct: 428 LVAAAMLSNRYITDRFLPDKAID--LVD--EAASRLRMQVDSKPEELDEIDRRIMQLKIE 483 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + +++ D A ++ T+K+ K +L A + ++ L E A Sbjct: 484 REALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADLKRQLEEARNA 543 Query: 449 QENSQCDFDPMKM--RMESEIRGLLKGM 474 +Q + + K I L K + Sbjct: 544 LAIAQRNGEFQKAGELAYGTIPQLEKQL 571 >gi|27376515|ref|NP_768044.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium japonicum USDA 110] Length = 879 Score = 185 bits (470), Expect = 2e-45 Identities = 38/271 (14%), Positives = 81/271 (29%), Gaps = 30/271 (11%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + I +D + + + + + + I Sbjct: 256 EFEERLKAVLQEVTGSEGTFILFIDEMHTLIGAGKGDGAMDASNLLKPALARGELHCIGA 315 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ PS+E+ ++ E V+ T + Sbjct: 316 TTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTI--SILRGLKDKYEQHHGVRITDSALV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR L DKA A LKM+ K +++ ++ + Sbjct: 374 ASATLSNRYI---------TDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDREIIRL 424 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEE 445 + E + + ++D + T+++ K +LS+A++ + L Sbjct: 425 KIEQEALKKESDAGSKSRLQTLEKELVELEEKSASLTARWSAEKNKLSDAQKLKAELDGL 484 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 N+Q + K I L + + Sbjct: 485 RVELANAQRRGEFQKAGELAYGRIPELERQL 515 >gi|68189537|gb|EAN04203.1| AAA ATPase, central region:Clp, N terminal [Mesorhizobium sp. BNC1] Length = 891 Score = 185 bits (469), Expect = 3e-45 Identities = 36/250 (14%), Positives = 82/250 (32%), Gaps = 19/250 (7%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDACNFIL 289 +I +D + + + + + + + ++ + Sbjct: 295 GGVILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEYRKYVEKDAALA 354 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ + PS+E+ ++ E V+ + + A R Sbjct: 355 RRFQPVYVNEPSVEDTI--SILRGLKEKYEQHHKVRVSDSALVAAANLSNRYITDRFLPD 412 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A + L+M+ K +++E++ + + E + +++ DEA ++ Sbjct: 413 KAID--LVD--EAASRLRMQVDSKPEELDEVDRRIMQLKIEREALRVEKDEASKDRLERL 468 Query: 410 XXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM--RMES 465 T+K+ K +L A E ++ L E +Q + + Sbjct: 469 ERELAELEEQSANITAKWQAEKQKLGLAAELKKQLDEARNDLAIAQRKGEFQRAGELAYG 528 Query: 466 EIRGLLKGME 475 I L K ++ Sbjct: 529 RIPELEKKLK 538 >gi|38234653|ref|NP_940420.1| Putative ATP-dependent protease regulatory subunit, ClpB [Corynebacterium diphtheriae NCTC 13129] Length = 849 Score = 184 bits (467), Expect = 6e-45 Identities = 42/281 (14%), Positives = 80/281 (28%), Gaps = 42/281 (14%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------- 276 D+ A + L V + +E + ++ + Sbjct: 242 DLGSMVAGAKYRGEFEERLKAVLDEIKSAEGE-IITFIDELHTIVGAGATGDSAMDAGNM 300 Query: 277 -------------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 + ++ + FQ+ PS+E+ ++ Sbjct: 301 IKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVED--AVGILRGLKER 358 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 E+ V+ + A R A D L D A + L+ME +I Sbjct: 359 YEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPQEI 414 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RL 432 +ELE IVR + E + D A ++ +++ ++ Sbjct: 415 DELERIVRRLEIEEVALSKETDAASKDRLIKLRQELADEREKLGELVARWNNEKGAINKV 474 Query: 433 SEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 EA+E + L E + E ++R I L K Sbjct: 475 REAKEELERLRSESEIAERDGDYGKVAELR-YGRIPELEKQ 514 >gi|75674787|ref|YP_317208.1| AAA ATPase [Nitrobacter winogradskyi Nb-255] Length = 891 Score = 183 bits (466), Expect = 8e-45 Identities = 35/266 (13%), Positives = 79/266 (29%), Gaps = 20/266 (7%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + ++ +D + + + + + + Sbjct: 269 EFEERLKAVLQEVTSADGGIVLFIDEMHTLIGAGKADGAMDASNLLKPALARGELHCVGA 328 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ P++E+ ++ E V+ + Sbjct: 329 TTLDEYRKHVEKDAALARRFQPIFVSEPTVEDTV--SILRGLKDKYEQHHGVRIADSALV 386 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A LKM+ K +++ L+ + + E + Sbjct: 387 AAATLSHRYITDRFLPDKAID--LVD--EAAARLKMQVDSKPEELDSLDREIVRLKIEQE 442 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + ++D R TS++ K +LS+A + L + Sbjct: 443 ALKKESDAGSRTRLENLEKELADLEKRSADLTSRWNAEKNKLSDAARLKSELDQARIELA 502 Query: 451 NSQC--DFDPMKMRMESEIRGLLKGM 474 N+Q ++ I L K + Sbjct: 503 NAQRRGEYQIAGELAYGRIPELEKRL 528 >gi|48849033|ref|ZP_00303277.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Novosphingobium aromaticivorans DSM 12444] Length = 859 Score = 183 bits (465), Expect = 1e-44 Identities = 41/273 (15%), Positives = 83/273 (30%), Gaps = 31/273 (11%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V +I +D + + + + + + I Sbjct: 257 EFEERLKAVLDEVKGAE--GEIILFIDEMHTLIGAGKSEGAMDAGNLLKPALARGELHCI 314 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ P++E+ ++ E+ V+ Sbjct: 315 GATTLDEYQKYVEKDPALQRRFQPVFVGEPTVEDTI--SILRGIKDKYELHHGVRIADNA 372 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVR 385 + A R DR L DKA A + ++ME + K +IE+L+ + Sbjct: 373 IVAAATLSNRYI---------SDRFLPDKAIDLMDEAASRIRMEVESKPEEIEKLDRRII 423 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE--RRQYLF 443 + E + D+A ++ T+++ R A E ++ L Sbjct: 424 QMKIEEMALAKETDQASKDRLATLREELANQEQQSAELTTRWQNERDKIAAEGKVKEALD 483 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 E +Q + D K I L + + Sbjct: 484 AARSELEVAQRNGDLAKAGELAYGRIPELERQL 516 >gi|54294637|ref|YP_127052.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella pneumophila str. Lens] Length = 858 Score = 183 bits (464), Expect = 1e-44 Identities = 39/262 (14%), Positives = 78/262 (29%), Gaps = 37/262 (14%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDAC 285 +I +D + + + + + + I ++ Sbjct: 267 AKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D PS+E+ ++ E+ V+ T + A R Sbjct: 327 AALERRFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVEITDPALVAAATLSHRYI--- 381 Query: 346 RSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + ++ME K +++LE + + E + + + DE Sbjct: 382 ------SDRQLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDE 435 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL------SEAEERRQYLFEELKAQENSQC 454 A ++ + + E Q E E ++ Sbjct: 436 ASKKRLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLE----METARR 491 Query: 455 DFDPMKM--RMESEIRGLLKGM 474 D +M I L K + Sbjct: 492 AGDLSRMSELQYGRIPELEKRL 513 >gi|15159084|gb|AAK89256.1| AGR_L_1346p [Agrobacterium tumefaciens str. C58] Length = 887 Score = 182 bits (462), Expect = 2e-44 Identities = 37/271 (13%), Positives = 85/271 (31%), Gaps = 30/271 (11%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + +I +D + + + + + + Sbjct: 268 EFEERLKAVLNEVQAENGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGA 327 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ D P++E+ ++ E V+ + + Sbjct: 328 TTLDEYRKHVEKDPALARRFQPVLVDEPNVEDTI--SILRGLKEKYEQHHKVRISDSALV 385 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR L DKA A + L+M+ K +++EL+ + Sbjct: 386 AAATLSNRYI---------TDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRIIQL 436 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEE 445 + E + + + D++ + T+++ K +L A + ++ L E Sbjct: 437 KIEREALKQETDQSSVDRLRKLEDELADTEEKADALTARWQAEKQKLGHAADLKKRLDEA 496 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 +Q + + I GL K + Sbjct: 497 RNELAIAQRNGQFQRAGELTYGIIPGLEKEL 527 >gi|72160604|ref|YP_288261.1| ATPase [Thermobifida fusca YX] Length = 867 Score = 181 bits (461), Expect = 3e-44 Identities = 40/272 (14%), Positives = 84/272 (30%), Gaps = 30/272 (11%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + +I +D + + ++ + + Sbjct: 254 EFEERLKAVLNEIKQSEGQIITFIDELHTVVGAGAAEGAMDAGNMLKPMLARGELRMVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + ++ + FQ+ + PS + ++ E VQ + Sbjct: 314 TTLDEYRERIEKDPALERRFQQVMVNEPSAADTIA--ILRGLKGRYEAHHKVQIADSALV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R R L DKA A + L+ME + +I+EL+ +V Sbjct: 372 AAATLSDRYI---------TARFLPDKAIDLIDEAASRLRMEIDSQPVEIDELQRVVDRL 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEE 445 + E ++D A ++ +++ + + E ++ L E Sbjct: 423 KMEEMALSKESDAASKQRLERLRADLADKEEQLNALIARWEQEKAGLNRVGELKEKLDEL 482 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E +Q D D + M EI L + +E Sbjct: 483 RGQAERAQRDGDFEEASRLMYGEIPQLERQLE 514 >gi|68262865|emb|CAI36353.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Corynebacterium jeikeium K411] Length = 873 Score = 181 bits (460), Expect = 3e-44 Identities = 37/281 (13%), Positives = 81/281 (28%), Gaps = 40/281 (14%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------- 276 D+ A + L V + +E + ++ Sbjct: 242 DLGSMVAGAKYRGEFEERLKAVLDEIKEAEGE-VVTFIDELHTIVGAGAGGDSAMDAGNM 300 Query: 277 -------------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 + ++ + FQ+ P+ E+ G ++ Sbjct: 301 IKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVYVGEPTAEDTIG--ILRGLKER 358 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 E+ V+ + A R A D L D A + L+ME + +I Sbjct: 359 YEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAID--LVD--EAASRLRMEIDSRPEEI 414 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEA 435 + +E +VR + E + + D A ++ T+++ + + Sbjct: 415 DNVERVVRRLEIEEMALEKETDAASKDRLERLRSELADEKEKLAGLTARWENEKGSIDSL 474 Query: 436 EERRQYLFEELKAQENSQCDFDPMK--MRMESEIRGLLKGM 474 E ++ L + E ++ + D K I + K + Sbjct: 475 RELKEELDNLRRESEIAEREGDFAKVAELRYGHIPDVEKKL 515 >gi|58698222|ref|ZP_00373142.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia endosymbiont of Drosophila ananassae] Length = 866 Score = 181 bits (460), Expect = 4e-44 Identities = 41/267 (15%), Positives = 85/267 (31%), Gaps = 20/267 (7%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + E +I +D + + + + + + + I Sbjct: 269 EFEERLKAVINEISRAEGKIILFIDELHTLVGAGATSGAMDASNLLKPALARGEIRCIGA 328 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P+ + ++ E+ ++ T + Sbjct: 329 TTLDEYRQHIEKDPALARRFQPVFISQPTETDTI--SILRGLKERYEVHHGIRITDGAII 386 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R S A D L D A + +++E K I+ELE V + EA+ Sbjct: 387 AAATLSNRYITDRFSPDKAID--LID--EAASRVRIEMDSKPEVIDELERKVIQLKIEAE 442 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + ++DE ++ SK+ K +++ +E + L K E Sbjct: 443 ALKKESDENSKQRLKKINEEIENLNSKFADLNSKWQMEKNKIARIQETAEKLDNARKELE 502 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGME 475 +Q + K M I L ++ Sbjct: 503 LAQRSGNLGKAGELMYGVIPQLENELK 529 >gi|68538354|ref|ZP_00578132.1| AAA ATPase, central region:Clp, N terminal [Sphingopyxis alaskensis RB2256] Length = 862 Score = 181 bits (459), Expect = 4e-44 Identities = 43/251 (17%), Positives = 82/251 (32%), Gaps = 21/251 (8%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + + + + + +I ++ + Sbjct: 274 GQIILFIDEMHTLIGAGASEGSMDASNLLKPALSRGELHVIGATTLDEYQKYVEKDAALQ 333 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ D PS+E+ ++ E+ V T + A+ R + Sbjct: 334 RRFQPVYIDEPSVEDTI--SILRGLKEKYELHHGVNITDSAIVAAAQLSDRYIQNRFLPD 391 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A + ++ME + K +IE L+ + + E ++DEA ++ Sbjct: 392 KAID--LMD--EAASRIRMEVESKPEEIENLDRRIIQLKIEESALAKESDEASKDRLATL 447 Query: 410 XXXXXXXXXXXXXYTSKYLKLRLS---EAEERRQYLFEELKAQENSQCDFDPMKM--RME 464 T+++ R EA+ + Q L+ E +Q D K Sbjct: 448 RKELAELEQKSSELTTRWQNERDKIQAEAKIKEQLDLARLE-LEQAQRAGDLQKAGELSY 506 Query: 465 SEIRGLLKGME 475 I L K +E Sbjct: 507 GTIPSLEKQLE 517 >gi|67153835|ref|ZP_00415580.1| AAA ATPase, central region:Clp, N terminal [Azotobacter vinelandii AvOP] Length = 946 Score = 181 bits (459), Expect = 5e-44 Identities = 37/271 (13%), Positives = 81/271 (29%), Gaps = 30/271 (11%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + +I +D + + + + + + Sbjct: 346 EFEERLKAVLNELAKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGA 405 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D PS E+ ++ E+ V T + Sbjct: 406 TTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIA--ILRGLKERYEVHHGVTITDGAII 463 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A+ R DR+L DKA A + ++ME K +++ L+ + Sbjct: 464 AAAKLSHRYI---------TDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQL 514 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEEL 446 + E + + + DEA ++ + + + Q E+ Sbjct: 515 KIEREALKKETDEATKKRLAKLEEDIAKLEREYADLEEIWKSEKAEVQGSAQIQQQLEQA 574 Query: 447 KA-QENSQCDFDP--MKMRMESEIRGLLKGM 474 K E ++ D M I L + + Sbjct: 575 KLDLEAARRKGDLNRMAELQYGLIPELERKL 605 >gi|39937493|ref|NP_949769.1| endopeptidase Clp: ATP-binding subunit B, clpB [Rhodopseudomonas palustris CGA009] Length = 879 Score = 180 bits (458), Expect = 5e-44 Identities = 34/255 (13%), Positives = 75/255 (29%), Gaps = 29/255 (11%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFI 288 +I +D + + + + + + I ++ + Sbjct: 272 EGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCIGATTLDEYRKHVEKDAAL 331 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ P++E+ ++ E V+ + R Sbjct: 332 ARRFQPVFVSEPTVEDTV--SILRGLKDKYEQHHGVRIADSALVAAVTLSNRYI------ 383 Query: 349 LDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A LKM+ K +++ ++ + + E + + + D + Sbjct: 384 ---TDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDREIVRLKIEQEALKKETDPGSK 440 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQC--DFDPM 459 T ++ K +LS+A++ + L N+Q ++ Sbjct: 441 ARLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQKLKSELDALRIELANAQRRGEYQRA 500 Query: 460 KMRMESEIRGLLKGM 474 I L K + Sbjct: 501 GELAYGRIPELEKKI 515 >gi|26248955|ref|NP_754995.1| ClpB protein [Escherichia coli CFT073] Length = 861 Score = 180 bits (458), Expect = 6e-44 Identities = 38/260 (14%), Positives = 84/260 (32%), Gaps = 29/260 (11%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 +I +D + + + + + + + ++ Sbjct: 271 AKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 330 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ PS+E+ ++ E+ VQ T + A R Sbjct: 331 AALERRFQKVFVAEPSVEDTIA--ILRGLKERYELHHHVQITDPAIVAAATLSHRYI--- 385 Query: 346 RSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + ++M+ K +++ L+ + + E ++DE Sbjct: 386 ------ADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDE 439 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEELK-AQENSQCDFDP 458 A ++ ++ + S + + + E+ K A E ++ D Sbjct: 440 ASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDL 499 Query: 459 MKM--RMESEIRGLLKGMEM 476 +M +I L K +E Sbjct: 500 ARMSELQYGKIPELEKQLEA 519 >gi|66802530|ref|XP_635137.1| hypothetical protein DDB0183816 [Dictyostelium discoideum] Length = 886 Score = 180 bits (457), Expect = 7e-44 Identities = 39/267 (14%), Positives = 87/267 (32%), Gaps = 20/267 (7%) Query: 224 FVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + D +I +D + + + ++ + + + I Sbjct: 255 FEERLKAVLKEVKDSNGGIILFIDEIHLVLGAGKTDGAMDAANLLKPMLARGELRCIGAT 314 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ FQ+ + P++ + ++ E V+ T + V Sbjct: 315 TLDEYRQYVEKDPAFERRFQQVFVNEPTVNDTI--SILRGLKERYETHHGVRITDNALVV 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D+ACA T +++ + I+ LE + E+ Sbjct: 373 AAQLSHRYITNRFLPDKAID--LVDEACANTRVQLN--SQPEAIDNLERRRLQLEVESAA 428 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEELK-AQEN 451 + + D+A ++ +KY K R + + E++K + Sbjct: 429 LEKEEDDASKQRLKAVQEELNQIKDELQPLEAKYQKERSRVDKIRELRKKLEDIKVKLSD 488 Query: 452 SQCDFDPMKMRMES--EIRGLLKGMEM 476 ++ +D I L K +E+ Sbjct: 489 AERRYDTSAAADYRYFVIPDLEKQIEV 515 >gi|28629052|gb|AAO49455.1| heat shock protein 78 [Leptosphaeria maculans] Length = 807 Score = 180 bits (457), Expect = 8e-44 Identities = 40/268 (14%), Positives = 88/268 (32%), Gaps = 20/268 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 + +K V + +I +D + + + + + + +L Sbjct: 192 DFEERLKSVLKEVEEAKK--GVILFVDELHTLLGLGKAEGSIDASNLLKPALSRGELQLC 249 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + FQ P++++ ++ E+ V+ T + Sbjct: 250 GATTLSEYRQIEKDAALARRFQPIQVGEPTVQDTI--SILRGIKERYEVHHGVRITDNAL 307 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 A R A D L D A + L+++++ K I+EL+ + Q E Sbjct: 308 VAAASYSNRYITDRFLPDKAID--LVD--EAASALRLQQESKPDAIQELDRQIMTIQIEL 363 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEELK-AQ 449 + + + D A +E T K+ K R E + Q E+ + Sbjct: 364 ESLRKETDIASKERRQRLEESLKQKQEEAKGLTEKWEKERAELEEIKNAQENLEKARLEL 423 Query: 450 ENSQCDFDPMKM--RMESEIRGLLKGME 475 E ++ + + K S I L++ + Sbjct: 424 EQARREGNFAKAGELQYSRIPELIEKLP 451 >gi|69300937|ref|ZP_00622398.1| AAA ATPase, central region:Clp, N terminal [Silicibacter sp. TM1040] Length = 902 Score = 180 bits (456), Expect = 1e-43 Identities = 40/271 (14%), Positives = 84/271 (30%), Gaps = 30/271 (11%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D +I +D + + + + + + I Sbjct: 284 EFEERLKGILNEVTDAAGEIILFIDEMHTLVGAGKSDGAMDAANLIKPALARGELHCIGA 343 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P++E+ ++ E+ V+ + Sbjct: 344 TTLDEYRKYVEKDAALARRFQPVMVTEPTVEDTI--SILRGIKEKYELHHGVRIADAALV 401 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR L DKA A + L+ME K +++ L+ + Sbjct: 402 SAATLSNRYI---------TDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALDRQILQM 452 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFEE 445 Q E + +L+ D A ++ T+++ R A R ++ L Sbjct: 453 QIEEEALKLEDDAASKDRLEHLQKELADLQERSREMTAQWQSERDKLASARDLKEQLDRA 512 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + ++ + + K I GL K + Sbjct: 513 RAELDIAKREGNLAKAGELSYGVIPGLEKQL 543 >gi|76164358|gb|EAO58508.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chloroflexus aurantiacus J-10-fl] Length = 861 Score = 180 bits (456), Expect = 1e-43 Identities = 39/268 (14%), Positives = 86/268 (32%), Gaps = 27/268 (10%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------ 276 F + + + + +I +D + + ++ + + Sbjct: 257 EFEERLKAVLKEIQERDDIILFVDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMVGAT 316 Query: 277 ---KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + FQ D PS+E+ ++ E V+ T + Sbjct: 317 TLDEYRKHIEKDAALERRFQPVMVDPPSVEDTI--SILRGLKERYETHHGVRITDGALIA 374 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A L+ME ++++L+ + + E + Sbjct: 375 AAMLSDRYISDRFLPDKAID--LID--EAAARLRMEITSDPQELDDLKRRIMQLEIEREA 430 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK----AQ 449 + + D+A +E ++ + R ER Q L E+++ A Sbjct: 431 LRKEKDQASKERLEKLEQELANLREQRSALEAQIQRERQEL--ERIQQLKEKIEQTRAAI 488 Query: 450 ENSQCDFDPMKMRMESEIRGLLKGMEMT 477 E +Q +D ++ L G ++ Sbjct: 489 EQAQRQYD------YNKAAELQYGTLVS 510 >gi|42631176|ref|ZP_00156714.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Haemophilus influenzae R2866] Length = 856 Score = 180 bits (456), Expect = 1e-43 Identities = 46/272 (16%), Positives = 85/272 (31%), Gaps = 30/272 (11%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + + +I +D + + + + + + Sbjct: 254 EFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D PS+E+ ++ EI V T + Sbjct: 314 TTLDEYRQYIEKDAALERRFQKVFVDEPSVEDTIA--ILRGLKERYEIHHHVDITDPAIV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR+L DKA A + ++ME K ++ LE + Sbjct: 372 AAATLSHRYI---------SDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQL 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEE 445 + E Q + DEA R+ + K LS ++ +Q L Sbjct: 423 KLEQQALQKEEDEASRKRLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTA 482 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E ++ D KM I L K +E Sbjct: 483 KTELEQARRAGDLAKMSELQYGRIPALEKQLE 514 >gi|46202513|ref|ZP_00053096.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Magnetospirillum magnetotacticum MS-1] Length = 698 Score = 179 bits (454), Expect = 2e-43 Identities = 31/251 (12%), Positives = 76/251 (30%), Gaps = 21/251 (8%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFIL 289 ++ +D + + + + + ++ ++ + Sbjct: 273 GEVVLFIDEMHTLIGAGAAEGSMDASNLLKPALARGELHCIGATTLNEYRKHVEKDAALA 332 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ P +E+ ++ E+ V+ + A R Sbjct: 333 RRFQPVFVTEPGVEDTV--SILRGLKEKYELHHGVRIADGALVSAATLSNRYITDRFLPD 390 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A + L+M+ K ++EL+ + + E + + ++D R+ Sbjct: 391 KAID--LVD--EAASRLRMQIDSKPEALDELDRRIVQLKIEREALKKESDAGSRDRLGKI 446 Query: 410 XXXXXXXXXXXXXYTSKYLKLRLSEAE-----ERRQYLFEELKAQENSQCDFDPMKMRME 464 + ++ + A+ E+ + EL E + +++ Sbjct: 447 EVELTQLERESFDMSERWRAEKSQLADSTKVKEQLEEARIELANAERAANWGRAGELK-F 505 Query: 465 SEIRGLLKGME 475 I L K +E Sbjct: 506 GVIPELEKRIE 516 >gi|58580960|ref|YP_199976.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae KACC10331] Length = 898 Score = 178 bits (452), Expect = 3e-43 Identities = 37/256 (14%), Positives = 83/256 (32%), Gaps = 31/256 (12%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFI 288 +I +D + + + + + + I ++ + Sbjct: 307 EGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAAL 366 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ+ P++E+ ++ + V+ T + A R Sbjct: 367 ERRFQKVFVGEPTVEDTIA--ILRGLKERYAVHHGVEITDPAIVAAATLSNRYI------ 418 Query: 349 LDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR+L DKA A + ++ME K +++ LE + + + +M + + D+A R Sbjct: 419 ---TDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASR 475 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-----EERRQYLFEELKAQENSQCDFDP 458 + + + + +E+ ++ EL+A + Q D+ Sbjct: 476 QRLADLESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQ-DYAK 534 Query: 459 MKMRMESEIRGLLKGM 474 M + L K M Sbjct: 535 MSEIQYGVLPQLEKQM 550 >gi|53802726|ref|YP_115493.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Methylococcus capsulatus str. Bath] Length = 859 Score = 178 bits (452), Expect = 3e-43 Identities = 33/259 (12%), Positives = 78/259 (30%), Gaps = 27/259 (10%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDAC 285 +I +D + + + + + + I ++ Sbjct: 267 AKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D P++E+ ++ E+ V T + A R Sbjct: 327 AALERRFQKVLVDEPTVEDTIA--ILRGLKERYEVHHGVTITDPAIVAAATLSHRYITDR 384 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 + A D L D A + ++ME K +++ L+ + + E + + + DEA ++ Sbjct: 385 QLPDKAID--LVD--EAASRIRMEIDSKPEEMDRLDRRLIQLRIEREALKKETDEASKKR 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEA------EERRQYLFEELKAQENSQCDFDPM 459 + + + EE + + +N++ D Sbjct: 441 LEALEGEIGKLEKEYADLEEIWKSEKARLSGAASIKEELEKARLD----LDNAKRSGDLT 496 Query: 460 KM--RMESEIRGLLKGMEM 476 + I L K + + Sbjct: 497 RAGQIQYERIPALEKRLAV 515 >gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 857 Score = 178 bits (451), Expect = 3e-43 Identities = 40/272 (14%), Positives = 82/272 (30%), Gaps = 32/272 (11%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + +I +D + + + + + + Sbjct: 252 EFEERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGA 311 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D P++E+ ++ EI VQ T + Sbjct: 312 TTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIA--ILRGLKERYEIHHHVQITDPAIV 369 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR+L DKA A + L+ME K +++LE + Sbjct: 370 AAATLSHRYI---------SDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQL 420 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQYL 442 + E Q + DEA R+ + + + + Sbjct: 421 KLERQALQKEEDEASRQRLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENA 480 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 E+ + +F+ M +I L K + Sbjct: 481 RIEMDQARR-ENNFEKMSELQYGKIPALEKQL 511 >gi|33151758|ref|NP_873111.1| ATP-dependant Clp protease chain B [Haemophilus ducreyi 35000HP] Length = 856 Score = 178 bits (451), Expect = 4e-43 Identities = 40/272 (14%), Positives = 80/272 (29%), Gaps = 32/272 (11%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + +I +D + + + + + + Sbjct: 252 EFEERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGA 311 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D PS+E+ ++ EI VQ T + Sbjct: 312 TTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIA--ILRGLKERYEIHHHVQITDPAIV 369 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR+L DKA A + L+ME K +++LE + Sbjct: 370 AAATLSHRYI---------SDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQL 420 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQYL 442 + E Q + DEA R+ + + + + Sbjct: 421 KLERQALQKEKDEASRQRLAKLDEEMTAKAQEYSALEEVWKAEKSALLGTQHLKTELENA 480 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 + + + F+ M I L K + Sbjct: 481 RIAMDQAKRADN-FEKMSELQYGTIPALEKQL 511 >gi|71368674|ref|ZP_00659163.1| AAA ATPase, central region:Clp, N terminal [Nocardioides sp. JS614] Length = 866 Score = 177 bits (450), Expect = 5e-43 Identities = 38/283 (13%), Positives = 83/283 (29%), Gaps = 40/283 (14%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------- 276 D+ A + L V + + + + ++ Sbjct: 245 DLAAMVAGAKYRGEFEERLKAVLEEIKAAGGQ-VITFIDELHTVVGAGAGGDSAMDAGNM 303 Query: 277 -------------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 + + ++ + FQ+ PS+E+ ++ Sbjct: 304 LKPMLARGELHMIGATTLDEYRERIEKDPALERRFQQVFVGEPSVEDTI--QILRGIQEK 361 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 E V+ T + A R + A D L D A + L+ME + +I Sbjct: 362 YEAHHGVRITDAALVAAATLSDRYISGRQLPDKAID--LID--EAASRLRMEIESSPEEI 417 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-E 436 + L V + E ++DEA +E +++ + + + E Sbjct: 418 DRLRRAVERLKMEEFALAKESDEASKERLANLRQDLADHEEELRALEARWEREKSTLEGE 477 Query: 437 ERRQYLFEELK-AQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 + ++L+ + Q + D K + I L + +E Sbjct: 478 GELRRQLDQLRMEADRLQREGDLGKASELLYGRIPALEQQIEA 520 >gi|16125131|ref|NP_419695.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Caulobacter crescentus CB15] Length = 859 Score = 177 bits (450), Expect = 5e-43 Identities = 32/250 (12%), Positives = 80/250 (32%), Gaps = 19/250 (7%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDACNFI 288 ++I +D + + + + + + + ++ + Sbjct: 270 EGSIILFIDEMHTLVGAGKGDGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDAAL 329 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ P++E+ ++ E+ V+ + + A R Sbjct: 330 ARRFQPVFVSEPTVEDTV--SILRGLKEKYEVHHGVRISDSAIVAAATLSNRYIADRFLP 387 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXX 408 A D L D A + ++M+ K +++E++ + + E + + D A ++ Sbjct: 388 DKAID--LVD--EASSRVRMQIDSKPEELDEIDRRLVQLKIEREALSKETDAASKQRLEN 443 Query: 409 XXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM--RME 464 T+++ K ++ A + R+ L N+Q D + Sbjct: 444 LEVEIDDLQFRSDEMTARWKAEKEKVGGAAQAREALDRLRADLANAQRAGDFARAGQIQY 503 Query: 465 SEIRGLLKGM 474 EI L + + Sbjct: 504 GEIPALERRL 513 >gi|56708764|ref|YP_170660.1| ClpB protein [Francisella tularensis subsp. tularensis Schu 4] Length = 859 Score = 177 bits (449), Expect = 6e-43 Identities = 36/260 (13%), Positives = 81/260 (31%), Gaps = 19/260 (7%) Query: 229 FQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSK---------LI 279 + +I +D + + + + + + K Sbjct: 261 SVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEYR 320 Query: 280 DPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKM 339 + ++ + FQ+ D P++E+ ++ E+ V T + A Sbjct: 321 EYVEKDPALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHGVNITDSAIVSAATLSH 378 Query: 340 RMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD 399 R + A D L D A + ++ME K ++E L + + + + + + D Sbjct: 379 RYITDRQLPDKAID--LVD--EAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKD 434 Query: 400 EARREAEXXXXXXXXXXXXXXXXYTS--KYLKLRLSEAEERRQYLFEELKAQENSQCDFD 457 +A ++ K KL++ + ++ L + E Q D Sbjct: 435 DATKKRLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGD 494 Query: 458 PMKM--RMESEIRGLLKGME 475 KM +I L ++ Sbjct: 495 LSKMAELQYGKIPELEAQIK 514 >gi|61102045|ref|ZP_00377499.1| ATP-dependent Clp protease [Erythrobacter litoralis HTCC2594] Length = 859 Score = 177 bits (449), Expect = 6e-43 Identities = 42/269 (15%), Positives = 81/269 (30%), Gaps = 21/269 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V +I +D + + + + + I Sbjct: 257 EFEERLKAVLDEVKGA--DGQIILFIDEMHTLIGAGASEGSMDASNLLKPALSRGELHCI 314 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ D PS+E+ ++ E+ V T Sbjct: 315 GATTLDEYQKYVEKDPALQRRFQSVYIDEPSVEDTI--SILRGIAEKYELHHGVNITDGA 372 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R + A D L D A + ++ME + K +IE L+ + + E Sbjct: 373 LVAAARLSDRYIQNRFLPDKAID--LMD--EAASRIRMEVESKPEEIENLDRRIIQLKIE 428 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFEELKA 448 + + D A ++ T+++ R E ++ L + Sbjct: 429 EQALEKETDSASKDRLETLRKELSELEQKSSELTTRWQNERDKIQGETRIKEELDQARIE 488 Query: 449 QENSQCDFDPMKM--RMESEIRGLLKGME 475 E ++ D K I L K +E Sbjct: 489 LEQAERSGDLAKAGELSYGRIPELEKKLE 517 >gi|11561806|gb|AAC83688.2| 101 kDa heat shock protein; HSP101 [Nicotiana tabacum] Length = 909 Score = 176 bits (446), Expect = 1e-42 Identities = 37/266 (13%), Positives = 81/266 (30%), Gaps = 21/266 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + +I +D + + ++ + + Sbjct: 256 EFEERLKAVLKEVEEAE--GKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCI 313 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ FQ+ PS+ + ++ E V+ R Sbjct: 314 GATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTI--SILRGLKERYEGHHGVKIQDRA 371 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + V A+ R A D L D+ACA +++ + +I+ LE + E Sbjct: 372 LVVAAQLSSRYITGRHLPDKAID--LVDEACANVRVQL--DSQPEEIDNLERKRIQLEVE 427 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + + D+A + +Y K R+ E +Q E + A Sbjct: 428 LHALEKEKDKASKARLIEVRKELDDLRDKLQPLMMRYKKEKERIDELRRLKQKRDELIYA 487 Query: 449 QENSQCDFDPMKM--RMESEIRGLLK 472 + ++ +D + I+ + Sbjct: 488 LQEAERRYDLARAADLRYGAIQEVET 513 >gi|530207|gb|AAA66338.1| heat shock protein Length = 911 Score = 175 bits (445), Expect = 2e-42 Identities = 37/266 (13%), Positives = 81/266 (30%), Gaps = 21/266 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + +I +D + + ++ + + Sbjct: 256 EFEERLKAVLKEVEEAE--GKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCI 313 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ FQ+ PS+ + ++ E V+ R Sbjct: 314 GATTLEEYRKYVEKDAAFERRFQQVFVAEPSVVDTI--SILRGLKERYEGHHGVRIQDRA 371 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + + A+ R A D L D+ACA +++ + +I+ LE + E Sbjct: 372 LVMAAQLSNRYITGRHLPDKAID--LVDEACANVRVQL--DSQPEEIDNLERKRMQLEVE 427 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + + D+A + KY K R+ E ++ E L A Sbjct: 428 LHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMKYRKEKERVDEIRRLKKKREELLFA 487 Query: 449 QENSQCDFDPMKM--RMESEIRGLLK 472 + ++ +D + I+ + Sbjct: 488 LQEAERRYDLARAADLRYGAIQEVET 513 >gi|68180177|ref|ZP_00553160.1| AAA ATPase, central region:Clp, N terminal [Jannaschia sp. CCS1] Length = 871 Score = 175 bits (445), Expect = 2e-42 Identities = 36/256 (14%), Positives = 83/256 (32%), Gaps = 29/256 (11%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDACNFIL 289 +I +D + + + + + + + ++ + Sbjct: 271 GEIILFIDEMHTLVGAGKADGAMDAANLIKPALARGELHCVGATTLDEYRKYVEKDAALA 330 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ + P++++ ++ E+ V+ + + + R Sbjct: 331 RRFQPLVVEEPTVDDTV--SILRGIKEKYELHHGVRISDSALVAASNLSHRYI------- 381 Query: 350 DACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A + L+ME K +++ L+ + Q EA+ + ++D A ++ Sbjct: 382 --TDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALDRQILQMQIEAEALKQESDTASKD 439 Query: 405 AEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFEELKAQENSQCDFDPMKM- 461 T+K+ R R ++ L + ++ + D K Sbjct: 440 RLETLEKDLGDLQQQSAEMTAKWQAERDKLESARGLKERLDHARAELDQAKRNGDLGKAG 499 Query: 462 -RMESEIRGLLKGMEM 476 I L K +E+ Sbjct: 500 ELSYGVIPQLEKELEV 515 >gi|46156241|ref|ZP_00133175.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Haemophilus somnus 2336] Length = 872 Score = 175 bits (444), Expect = 2e-42 Identities = 43/271 (15%), Positives = 82/271 (30%), Gaps = 30/271 (11%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + +I +D + + + + + + Sbjct: 270 EFEERLKAVLKELAQEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGA 329 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ P++E+ ++ EI VQ T + Sbjct: 330 TTLDEYRQYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKERYEIHHHVQITDPAIV 387 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR+L DKA A + ++ME K ++ LE + Sbjct: 388 AAATLSHRYI---------SDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQL 438 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 + E Q + DEA R+ + + LS A+ + L Sbjct: 439 KLEQQALQKEDDEASRKRLDLLEEELGEKEREYAELEDVWKAEKAALSGAQHIKAELDNA 498 Query: 446 LKAQENSQC--DFDPMKMRMESEIRGLLKGM 474 E ++ DF M I L K + Sbjct: 499 KIQMEQARRISDFAKMSELQYGRIPELEKQL 529 >gi|61679305|gb|AAX52932.1| ClpB [Bifidobacterium animalis subsp. animalis] Length = 899 Score = 175 bits (444), Expect = 3e-42 Identities = 39/249 (15%), Positives = 78/249 (31%), Gaps = 19/249 (7%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + I ++ + + +LI ++ + Sbjct: 276 GQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALE 335 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ+ PS+E+ ++ E V + A R + Sbjct: 336 RRFQQVFVGEPSVEDTIA--ILRGLKQRYEAHHKVTIGDDALVAAATLSNRYITGRQLPD 393 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A L+ME + +I+EL+ V + E + D A +E Sbjct: 394 KAID--LVD--EAAAHLRMELDSQPEEIDELQRKVTRLEMEEMQLKKAEDPASKERLAKL 449 Query: 410 XXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM--RMES 465 +++ K ++ + R L E+ + + + D K + Sbjct: 450 QSELADAREKLAGLNARWNAEKEGHNKVGDLRAQLDEKRVEADKATREGDLAKASRILYG 509 Query: 466 EIRGLLKGM 474 EI + K + Sbjct: 510 EIPAIQKQL 518 >gi|38492939|pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb Length = 854 Score = 175 bits (444), Expect = 3e-42 Identities = 39/268 (14%), Positives = 83/268 (30%), Gaps = 21/268 (7%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + +LI Sbjct: 246 EFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGA 305 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D P++E ++ E+ V+ + + Sbjct: 306 TTLDEYREIEKDPALERRFQPVYVDEPTVEETI--SILRGLKEKYEVHHGVRISDSAIIA 363 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R + R A D L D A L+M + +I+ LE + E + Sbjct: 364 AATLSHRYITERRLPDKAID--LID--EAAARLRMALESAPEEIDALERKKLQLEIEREA 419 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELKA 448 + + D +E +++ + R L EA+ R + E++ Sbjct: 420 LKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIEL 479 Query: 449 QENSQCDFDPMKMRMESEIRGLLKGMEM 476 E ++R E+ L +E Sbjct: 480 AERQYDLNRAAELR-YGELPKLEAEVEA 506 >gi|537446|gb|AAA67927.1| AtHSP101 Length = 911 Score = 174 bits (442), Expect = 4e-42 Identities = 37/264 (14%), Positives = 81/264 (30%), Gaps = 20/264 (7%) Query: 223 GFVKDVFQHCAPNWDFEAL-IKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + D E I +D + + + ++ + + Sbjct: 255 EFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAANLFKPMLARGQLRCIGA 314 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ FQ+ PS+ + ++ E V+ R + Sbjct: 315 TTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTI--SILRGLKEKYEGHHGVRIQDRALI 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A+ R A D L D+ACA +++ + +I+ LE + E Sbjct: 373 NAAQLSARYITGRHLPDKAID--LVDEACANVRVQL--DSQPEEIDNLERKRMQLEIELH 428 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + + D+A + T KY K R+ E +Q E + + + Sbjct: 429 ALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQKREELMFSLQ 488 Query: 451 NSQCDFDPMKM--RMESEIRGLLK 472 ++ +D + I+ + Sbjct: 489 EAERRYDLARAADLRYGAIQEVES 512 >gi|28199560|ref|NP_779874.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1] Length = 861 Score = 174 bits (442), Expect = 4e-42 Identities = 36/258 (13%), Positives = 81/258 (31%), Gaps = 29/258 (11%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDAC 285 + +I +D + + + + + + I ++ Sbjct: 267 AKNEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ P++E+ ++ + V+ T + A R Sbjct: 327 AALERRFQKVFVGEPTVEDTIA--ILRGLKEKYALHHGVEITDPAIVAAATLSNRYI--- 381 Query: 346 RSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + ++ME K +++ LE + + + +M + + DE Sbjct: 382 ------TDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDE 435 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-QYLFEELKA-QENSQCDFDP 458 A ++ + + + + + E+ K E +Q D Sbjct: 436 ASKQRLVDLERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDY 495 Query: 459 MKM--RMESEIRGLLKGM 474 KM + L K + Sbjct: 496 AKMSEIQYGVLPALEKQL 513 >gi|71908340|ref|YP_285927.1| AAA ATPase, central region:Clp, N terminal [Dechloromonas aromatica RCB] Length = 863 Score = 174 bits (441), Expect = 5e-42 Identities = 35/271 (12%), Positives = 87/271 (32%), Gaps = 23/271 (8%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + A D +I +D + + + + + + Sbjct: 254 EFEERLKAVLKEVA--QDEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCI 311 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ ++ + FQ+ + PS+E+ ++ E+ V T Sbjct: 312 GATTLNEYRKYIEKDAALERRFQKVLVEEPSVESTIA--ILRGLQEKYELHHGVDITDPA 369 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + AE R A D L D A +KME K +++L+ + + E Sbjct: 370 IVAAAELSHRYITDRFLPDKAID--LID--EAAARIKMEIDSKPEVMDKLDRRIIQLKIE 425 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEE 445 + + + DEA ++ + + ++ +E +L + Sbjct: 426 REAVKKEKDEASKKRFGLIEEEIAKLTKEYSDLEEVWKAEKSAVLGSAQIKEEIDHLKAD 485 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + + + +++ ++ L ++ Sbjct: 486 IARLQREGKLGEVAELQ-YGKLPQLEAQLKA 515 >gi|56417033|ref|YP_154107.1| ATP-dependent clp protease ATP-binding subunit [Anaplasma marginale str. St. Maries] Length = 872 Score = 174 bits (441), Expect = 5e-42 Identities = 33/259 (12%), Positives = 84/259 (32%), Gaps = 22/259 (8%) Query: 230 QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLID 280 + A N +I +D + + ++ + + + + Sbjct: 266 KIVASN---GKIILFIDELHMLVGAGATGGSMDASNILKPVLARGEIRCIGATTLDEYRE 322 Query: 281 PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMR 340 ++ + FQ P+ + ++ E+ ++ T + A R Sbjct: 323 HIEKDPALARRFQPVFVAEPTTGDTI--SILRGLKEKYELHHGIRITDSAIVAAATLSNR 380 Query: 341 MFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 A D L D A + ++E K I+ ++ + + E+++ + + +E Sbjct: 381 YITDRFLPDKAID--LID--EAASRARIEIDSKPEIIDSIDRRIMQLKIESEVLKNEKNE 436 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDP 458 A ++ SK+ K+++S+ +E + L E +Q + Sbjct: 437 ASQQRLAVINAELNELSSEAADLNSKWQAEKIKISKMQELTEKLDGARIELEQAQRSGNL 496 Query: 459 MKM--RMESEIRGLLKGME 475 + M I L + ++ Sbjct: 497 SRAGELMYGVIPSLEQELK 515 >gi|56419334|ref|YP_146652.1| ATP-dependent Clp protease ATP-binding subunit [Geobacillus kaustophilus HTA426] Length = 862 Score = 174 bits (441), Expect = 5e-42 Identities = 43/269 (15%), Positives = 88/269 (32%), Gaps = 24/269 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + I ++ + + + I Sbjct: 255 EFEERLRAVLNEIKKSEGRIILFIDELHTIVGAGRAEGAIDAGNMLKPMLARGELRCIGA 314 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ P++E+ ++ E+ V+ R + Sbjct: 315 TTLDEYRQYIEKDPALERRFQQVLVQEPTVEDTI--SILRGLKERYEVHHGVKIHDRALV 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D+ACA ++ E + +++E+ V + E Sbjct: 373 AAAVLSDRYISDRFLPDKAID--LVDEACA--TIRTEMESMPSELDEVMRRVMQLEIEEA 428 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK----A 448 + DEA RE +++ K + EA +R + L E L+ Sbjct: 429 ALSKETDEASRERLAALQKELADLREKANAMKAQWQKEK--EALDRVRRLREALERAKRE 486 Query: 449 QENSQCDFDPMKM--RMESEIRGLLKGME 475 E ++ ++D K I L K ++ Sbjct: 487 LEEAENEYDLNKAAELRHGRIPQLEKQLK 515 >gi|49612793|emb|CAG76243.1| ClpB protein (heat shock protein f84.1) [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 858 Score = 174 bits (441), Expect = 5e-42 Identities = 33/253 (13%), Positives = 80/253 (31%), Gaps = 19/253 (7%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + +I +D + + + + + + + ++ Sbjct: 267 SKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ P++E+ ++ E+ VQ T + A R Sbjct: 327 AALERRFQKVFVAEPTVEDTIA--ILRGLKERYELHHHVQITDPAIVAAAMLSHRYISDR 384 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 + A D L D A + ++++ K ++ LE + + E + ++DEA ++ Sbjct: 385 KLPDKAID--LID--EAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQKR 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEELK-AQENSQCDFDP--MKM 461 ++ + S + + E+ K + E ++ D M Sbjct: 441 LELLSTELDQKEREYSRQDEEWKAEKASLTGTQNIKASLEQAKISLEQARRQGDLGRMSE 500 Query: 462 RMESEIRGLLKGM 474 +I L K + Sbjct: 501 LQYGKIPELEKQL 513 >gi|56679839|gb|AAV96505.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Silicibacter pomeroyi DSS-3] Length = 872 Score = 174 bits (441), Expect = 5e-42 Identities = 35/255 (13%), Positives = 82/255 (32%), Gaps = 29/255 (11%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + + + + + + I ++ + Sbjct: 271 GEIILFIDEMHTLVGAGKSDGAMDAANLIKPALARGELHCIGATTLDEYRKYVEKDAALA 330 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ + P++E+ ++ E+ V + + A R Sbjct: 331 RRFQPVLVEEPTVEDTI--SILRGIKEKYELHHGVDISDSALVAAATLSHRYI------- 381 Query: 350 DACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A + L+ME K +++L+ + Q E + + + D A ++ Sbjct: 382 --TDRFLPDKAIDLMDEAASRLRMEVDSKPEALDQLDRQILQLQIEEEALKKENDAASQD 439 Query: 405 AEXXXXXXXXXXXXXXXXYTSKYL--KLRLSEAEERRQYLFEELKAQENSQCDFDPMKM- 461 T+++ + +++ A+ ++ L E ++ + + + Sbjct: 440 RLATLQKDLAELQEKSAEMTAQWQASRDKMNAAQSVKEQLERARAELEIAKREGNLARAG 499 Query: 462 -RMESEIRGLLKGME 475 I L K E Sbjct: 500 ELSYGIIPELEKQRE 514 >gi|37525237|ref|NP_928581.1| heat shock protein F84.1 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 857 Score = 174 bits (441), Expect = 5e-42 Identities = 36/253 (14%), Positives = 77/253 (30%), Gaps = 19/253 (7%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 +I +D + + + + + + + ++ Sbjct: 267 AKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ PS+E+ ++ E+ VQ T + A R Sbjct: 327 AALERRFQKVYVAEPSVEDTIA--ILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 384 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 A D L D A L+M+ K ++ LE V + E + ++D+A ++ Sbjct: 385 MLPDKAID--LID--EAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKKR 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFEELKAQENSQCDFDPMKM-- 461 ++ + + + + L + E ++ D KM Sbjct: 441 LEMLNEELLVKEREYSELEEEWKAEKAALTGTQHIKAELENARISLEQARRSGDLAKMSE 500 Query: 462 RMESEIRGLLKGM 474 +I GL K + Sbjct: 501 IQYGKIPGLEKQL 513 >gi|48861360|ref|ZP_00315262.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Microbulbifer degradans 2-40] Length = 876 Score = 173 bits (440), Expect = 7e-42 Identities = 33/269 (12%), Positives = 83/269 (30%), Gaps = 22/269 (8%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + +I +D + + + + + + Sbjct: 254 EFEERLKAVLNELSKQEGRIILFVDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D P+ E+ ++ E+ V T + Sbjct: 314 TTLDEYRQYIEKDAALERRFQKVQVDEPNEEDTIA--ILRGLKERYEVHHGVNITDSAII 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A+ R + A D L D++ + ++ME K ++++LE + + E + Sbjct: 372 AAAKLSQRYITDRQLPDKAID--LIDES--ASRIRMEIDSKPEEMDKLERRLIQLKIERE 427 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELK 447 + D A +E + + E + + +L+ Sbjct: 428 AVKKDEDIASKERLKKIDSQINEIEKSFADLDEIWRAEKAALQGSQEIKSHLEKARLDLE 487 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGMEM 476 A + +++ I L K ++M Sbjct: 488 AARRAGDLGRMSELQ-YGIIPDLEKQLDM 515 >gi|22124822|ref|NP_668245.1| heat shock protein [Yersinia pestis KIM] Length = 864 Score = 173 bits (440), Expect = 8e-42 Identities = 35/258 (13%), Positives = 82/258 (31%), Gaps = 29/258 (11%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + ++I +D + + + + + + + ++ Sbjct: 274 SKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 333 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ P++E+ ++ E+ VQ T + A R Sbjct: 334 AALERRFQKVYVAEPTVEDTIA--ILRGLKERYELHHHVQITDPAIVAAATLSHRYI--- 388 Query: 346 RSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + ++M+ K ++ LE + + E + ++D+ Sbjct: 389 ------SDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDD 442 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEELKA-QENSQCDFDP 458 A ++ ++ + S + + E+ K E ++ D Sbjct: 443 ASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDL 502 Query: 459 MKM--RMESEIRGLLKGM 474 +M I L K + Sbjct: 503 ARMSELQYGTIPELEKQL 520 >gi|68213889|ref|ZP_00565718.1| AAA ATPase, central region:Clp, N terminal [Methylobacillus flagellatus KT] Length = 861 Score = 173 bits (439), Expect = 8e-42 Identities = 37/267 (13%), Positives = 79/267 (29%), Gaps = 20/267 (7%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + D I +D + + + + + + Sbjct: 254 EFEERLQAVLKELAQDEGKTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D PS+E ++ E+ V+ T + Sbjct: 314 TTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIA--ILRGLQEKYEVHHGVEITDPAIV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D A +KME K +++LE + + E + Sbjct: 372 AAAELSHRYITDRFLPDKAID--LID--EAAARIKMEIDSKPEALDKLERRLIQLKIERE 427 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEELKAQ-E 450 + DEA ++ + + + + E++K Q E Sbjct: 428 AVHREKDEASQKRLSLIEDEIRRLEKEYADLEEIWKAEKAQVQGSKHLKEEIEKVKLQIE 487 Query: 451 NSQCDFDPMK--MRMESEIRGLLKGME 475 + + K ++ L ++ Sbjct: 488 EATRKGEWQKVSELQYGKLPQLETQLK 514 >gi|69935649|ref|ZP_00630585.1| AAA ATPase, central region:Clp, N terminal [Paracoccus denitrificans PD1222] Length = 875 Score = 173 bits (439), Expect = 1e-41 Identities = 33/271 (12%), Positives = 87/271 (32%), Gaps = 30/271 (11%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + ++ +D + + + + + + Sbjct: 254 EFEERLKSVLKEIENAAGEIVLFIDELHVLVGAGKTDGAMDAANLIKPALARGELHCVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ + P++E+ ++ E+ V+ + + Sbjct: 314 TTLDEYRKYIEKDAALARRFQPVMIEEPTVEDTI--SILRGIKEKYELHHGVRISDAALV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR L DKA A + L+ME K +++ L+ + Sbjct: 372 AAATLSHRYI---------TDRFLPDKAIDLMDEAASRLRMEVDSKPEELDALDRQILQM 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEE 445 Q EA+ + + D A ++ T+++ + +L + ++ L Sbjct: 423 QIEAEALKKEDDAASQDRLEKLEKQLSELQEKSATMTARWQAERDKLEGSRNLKEQLDRA 482 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + ++ + + + I GL + + Sbjct: 483 RAELDQAKREGNLARAGELSYGIIPGLERQL 513 >gi|50843466|ref|YP_056693.1| ATP-dependent protease (Clp chaperone) [Propionibacterium acnes KPA171202] Length = 857 Score = 173 bits (439), Expect = 1e-41 Identities = 41/282 (14%), Positives = 81/282 (28%), Gaps = 50/282 (17%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------- 276 D+ A + L V + +E + ++ S Sbjct: 241 DLSSMVAGAKYRGEFEERLKAVLNEIKEAEGQ-IITFIDELHTVVGAGASGEGAMDAGNM 299 Query: 277 -------------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 + + ++ + FQ+ PS+E+ ++ Sbjct: 300 LKPMLARGELRMIGATTLDEYREHIEKDPALERRFQQVFVGEPSVEDTIA--ILRGLRER 357 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQK 372 E V+ T + A R R+L DKA A + L+ME Sbjct: 358 YEAHHKVRITDGALVAAASLSHRYI---------TARQLPDKAIDLIDEAASRLRMEIDS 408 Query: 373 KKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR- 431 +I+ L V + E + + D A ++ S++ + Sbjct: 409 SPEEIDTLRREVDRMKMEIFAVEKEDDPASQQRLTRLRADMADKEETLRGLESRWEAEKA 468 Query: 432 -LSEAEERRQYLFEELKAQENSQCDFD--PMKMRMESEIRGL 470 L++ E + + E A + Q + D + +I GL Sbjct: 469 GLNKVGELKTRIDELRTAADKYQREGDFGRASEILYGQIPGL 510 >gi|3150046|gb|AAC16900.1| ClpB chaperone homolog [Lactococcus lactis subsp. cremoris] Length = 867 Score = 173 bits (439), Expect = 1e-41 Identities = 33/268 (12%), Positives = 81/268 (30%), Gaps = 20/268 (7%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + I + ++ + + LI Sbjct: 256 EFEERLKAVLNEVKKADGQIILFIDELHTIVGAGKTEGSMDAGNLLKPMLARGELHLIGA 315 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ P++E+ ++ EI V + Sbjct: 316 TTLDEYRKYMETDKALERRFQKVLVTEPTVEDTI--SILRGLKERFEIHHGVTIHDNALI 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D+A A +++E ++++ + + E Sbjct: 374 AAATLSNRYITDRFLPDKAID--LIDEASA--TIRVEMNSLPTELDQANRRLMQLEIEEA 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLFEELKAQE 450 + + D+A ++ +++ + E+R L E Sbjct: 430 ALKKERDDASKKRLEIIRGEIAELREENNQLKAQWEAEKKEVGNISEKRNELEHARHELE 489 Query: 451 NSQCDFDPMK--MRMESEIRGLLKGMEM 476 +Q + + K +I + K ++ Sbjct: 490 EAQNEGNLEKAAALRYGKIPEIEKELKA 517 >gi|75824073|ref|ZP_00753540.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Vibrio cholerae RC385] Length = 857 Score = 173 bits (438), Expect = 1e-41 Identities = 36/260 (13%), Positives = 80/260 (30%), Gaps = 29/260 (11%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + +I +D + + + + + + + ++ Sbjct: 267 AKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D P++E+ ++ E+ V+ T + A R Sbjct: 327 PALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHHVEITDPAIVAAASLSHRYI--- 381 Query: 346 RSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + ++M+ K +++LE + + E + DE Sbjct: 382 ------SDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDE 435 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQENSQCDFDP 458 A + + + LS + + L + E ++ D Sbjct: 436 ASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDL 495 Query: 459 --MKMRMESEIRGLLKGMEM 476 M I L K +++ Sbjct: 496 NRMSELQYGRIPELEKQLDL 515 >gi|24427167|emb|CAD55328.1| ATP-dependent protease ATP-binding subunit [Streptomyces coelicolor A3(2)] Length = 865 Score = 173 bits (438), Expect = 1e-41 Identities = 43/281 (15%), Positives = 79/281 (28%), Gaps = 40/281 (14%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------- 276 D+ A + L V + S+ + ++ Sbjct: 242 DLGAMVAGAKYRGEFEERLKTVLAEIKDSDGQ-VVTFIDELHTVVGAGAGGDSAMDAGNM 300 Query: 277 -------------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 + + ++ + FQ+ P++E+ ++ Sbjct: 301 LKPMLARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDSIA--ILRGLKGR 358 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 E VQ + A R A D L D A + L+ME +I Sbjct: 359 YEAHHKVQIADSALVAAASLSDRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPVEI 414 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE- 436 +EL+ V + E + D A E T+++ K + S Sbjct: 415 DELQRSVDRLKMEELAIGKETDAASLERLERLRRDLADKEEELRGLTARWEKEKQSLNRV 474 Query: 437 -ERRQYLFEELKAQENSQCDF--DPMKMRMESEIRGLLKGM 474 E ++ L E E +Q D D + EI L + + Sbjct: 475 GELKEKLDELRGQAERAQRDGDFDTASKLLYGEIPDLERDL 515 >gi|58584441|ref|YP_198014.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 853 Score = 173 bits (438), Expect = 1e-41 Identities = 36/266 (13%), Positives = 81/266 (30%), Gaps = 20/266 (7%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + +I +D + + + + + + Sbjct: 256 EFEERLKAVINELAKAEGKIILFIDELHTLVGAGATSGAMDASNLLKPALARGEIRCIGA 315 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + ++ + FQ P+ + ++ E+ ++ T + Sbjct: 316 TTLDEYREHIEKDPALARRFQPVFISQPTETDTV--SILRGLKERYEVHHGIRITDGAII 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A + +++E K I+ELE + + E++ Sbjct: 374 AAAMLSNRYITDRFLPDKAID--LID--EAASRVRIEMDSKPEIIDELERKIVQLKIESE 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + + + DE ++ SK+ K +++ +E + L K E Sbjct: 430 VLKKERDENSKQRLKKINEEIENLNSKFTDLNSKWQMEKNKIARIQETAEKLDNARKELE 489 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGM 474 +Q K M I L + Sbjct: 490 LAQRSGKLEKAGELMYGVIPHLENEL 515 >gi|15075632|emb|CAC47187.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Sinorhizobium meliloti] Length = 868 Score = 172 bits (437), Expect = 1e-41 Identities = 36/271 (13%), Positives = 86/271 (31%), Gaps = 30/271 (11%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + +I +D + + + + + + Sbjct: 255 EFEERLKAVLNEVRSEGGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGA 314 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ + P++E+ ++ E V+ + + Sbjct: 315 TTLDEYRKHVEKDAALARRFQPVMVEEPTVEDTI--SILRGLKEKYEQHHKVRISDSALV 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR L DKA A + L+M+ K +++EL+ V Sbjct: 373 AAAALSNRYI---------TDRFLPDKAIDLMDEAASRLRMQVDSKPEELDELDRRVIQL 423 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEE 445 + E + + + D + ++ T+++ K +L +A + ++ L E Sbjct: 424 KIEREALKKETDVSSKDRLAKLELDLSSLEEEAAALTARWQAEKQKLGQAADLKKQLDEA 483 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + +Q + + I L K + Sbjct: 484 RNELQIAQRKGEFQRAGELAYGVIPNLEKEL 514 >gi|72384775|gb|AAZ67679.1| chaperone putative [Haemophilus parasuis] Length = 686 Score = 172 bits (437), Expect = 2e-41 Identities = 40/272 (14%), Positives = 82/272 (30%), Gaps = 32/272 (11%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + +I +D + + + + + + Sbjct: 252 EFEERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGA 311 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D P++E+ ++ EI VQ T + Sbjct: 312 TTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIA--ILRGLKERYEIHHHVQITDPAIV 369 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR+L DKA A + L+ME K +++LE + Sbjct: 370 AAATLSHRYI---------SDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQL 420 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQYL 442 + E Q + DEA R+ + + + + Sbjct: 421 KLERQALQKEEDEASRQRLAKLDEDLTAREREYAELEEVWKAEKSALLGTQHIKTELENA 480 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 E+ + +F+ M +I L K + Sbjct: 481 RIEMDQARR-ENNFEKMSELQYGKIPALEKQL 511 >gi|59711173|ref|YP_203949.1| ClpB protein [Vibrio fischeri ES114] Length = 861 Score = 172 bits (437), Expect = 2e-41 Identities = 38/273 (13%), Positives = 84/273 (30%), Gaps = 30/273 (10%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + ++I +D V + + + + + Sbjct: 254 EFEERLKAVLNELAKEEGSVILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGELHCVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D P++E+ ++ EI V+ T + Sbjct: 314 TTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTVA--ILRGLKERYEIHHHVEITDPAIV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR+L DKA A + ++ME K +++L+ + Sbjct: 372 AAASLSHRYI---------SDRQLPDKAIDLIDEAASSIRMEIDSKPESLDKLDRKIIQL 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 + E ++D+A + + + LS + + L Sbjct: 423 KIEQQALVKESDDASLKRLDSLNLELMQKEREYAELEEVWKAEKAALSGTQHIKTELETA 482 Query: 446 LKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 E ++ D M I L K +++ Sbjct: 483 RSNMEIARRAGDLNRMSELQYGRIPELEKQLDL 515 >gi|74316833|ref|YP_314573.1| ClpB protein [Thiobacillus denitrificans ATCC 25259] Length = 859 Score = 172 bits (436), Expect = 2e-41 Identities = 39/268 (14%), Positives = 79/268 (29%), Gaps = 22/268 (8%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D I LD + + + + + + LI Sbjct: 254 EFEERLKAVLKELAMDPGRYIVFLDEIHTLVGAGKAEGAIDAGNMLKPALARGELHLIGA 313 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ E+ V T + Sbjct: 314 TTLDEYRKYIEKDAALERRFQKVMVDEPSVESTIA--ILRGLQERYELHHGVDITDPAIV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D A +KME K +++L+ + + E + Sbjct: 372 AAAELSHRYITDRFLPDKAID--LID--EAAARIKMEIDSKPEVMDKLDRRIIQLKIERE 427 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-----EAEERRQYLFEELK 447 + + DEA ++ + + +E L E+ Sbjct: 428 AVKKETDEASKKRLGLLEDEIDKLGREYADLEEVWKSEKAQVQGSAHLKEEIDKLRGEMA 487 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGME 475 + Q D + ++ L ++ Sbjct: 488 DLQR-QGKLDKVAEIQYGKLPQLEAQLK 514 >gi|52307890|gb|AAU38390.1| ClpA protein [Mannheimia succiniciproducens MBEL55E] Length = 856 Score = 172 bits (436), Expect = 2e-41 Identities = 41/271 (15%), Positives = 82/271 (30%), Gaps = 30/271 (11%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + +I +D + + + + + + Sbjct: 254 EFEERLKAVLKELAQEEGKVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D P++E+ ++ E+ VQ T + Sbjct: 314 TTLDEYRQYIEKDAALERRFQKVFVDEPTVEDTIA--ILRGLKERYELHHHVQITDPAIV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR+L DKA A + ++ME K ++ L+ + Sbjct: 372 AAATLSHRYI---------SDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLDRRIIQL 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEE 445 + E + + DEA R+ + K LS + + L Sbjct: 423 KLEQQALKKEEDEASRKRLDMLEKELSEKEREYAELEEVWKSEKAALSGTQHIKAELESA 482 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 E ++ D KM I L K + Sbjct: 483 RTQMEQARRAGDLNKMSELQYGTIPALEKQL 513 >gi|29653454|ref|NP_819146.1| clpB protein [Coxiella burnetii RSA 493] Length = 859 Score = 172 bits (436), Expect = 2e-41 Identities = 38/270 (14%), Positives = 84/270 (31%), Gaps = 21/270 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS--- 276 E +K V + A +I +D + + + + + + Sbjct: 254 EFEERLKAVLKDIAKEE--GRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCV 311 Query: 277 ------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ + FQ+ + PS E+ ++ E+ V+ T Sbjct: 312 GATTLDEYRKYIEKDAALERRFQKVLVEEPSTEDAIA--ILRGLKERYEVHHGVEITDPA 369 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R A D L D A + ++ME K +++ LE + + E Sbjct: 370 IIAAATLSQRYITDRNLPDKAID--LID--EAASQIRMEMDSKPVELDRLERRLIQLKIE 425 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFEELKA 448 + + + DEA ++ + + S ++ ++ L + Sbjct: 426 REALKKETDEASKKRLSDLETEIKNVEKEYSDLEEVWKSEKASLHGTQQIKEELEQARIE 485 Query: 449 QENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E + D +M I L K ++ Sbjct: 486 LEAAGRAGDLARMSELQYGIIPELDKKLKA 515 >gi|69927725|ref|ZP_00624886.1| AAA ATPase, central region:Clp, N terminal [Nitrobacter hamburgensis X14] Length = 878 Score = 171 bits (435), Expect = 3e-41 Identities = 37/267 (13%), Positives = 78/267 (29%), Gaps = 20/267 (7%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + ++ +D + + + + + + Sbjct: 256 EFEERLKAVLQEVTSAAGGIVLFIDEMHTLIGAGKADGAMDASNLLKPALARGELHCVGA 315 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ P++E+ ++ E V+ + Sbjct: 316 TTLDEYRKHVEKDAALARRFQPIFVSEPTVEDTI--SILRGLKDKYEQHHGVRIADAALV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A LKM+ K +++ L+ + + E + Sbjct: 374 AAATLSHRYITDRFLPDKAID--LVD--EAAARLKMQVDSKPEELDSLDREIVRLRIEQE 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + + D R TS++ K +LS+A + L + Sbjct: 430 ALKKENDAGSRMRLENLEKELVDLEKQSADLTSRWNAEKGKLSDAARLKSELDQARIELA 489 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGME 475 N+Q + K I L K +E Sbjct: 490 NAQRRGEYQKAGELAYGRIPELEKRLE 516 >gi|54310128|ref|YP_131148.1| putative clpB, ATPases with chaperone activity [Photobacterium profundum SS9] Length = 861 Score = 171 bits (435), Expect = 3e-41 Identities = 36/260 (13%), Positives = 83/260 (31%), Gaps = 29/260 (11%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + + ++I +D + + + + + + + ++ Sbjct: 271 SQEEGSVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 330 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D P++E+ ++ E+ V+ T + A R Sbjct: 331 AALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHHVEITDPAIVAAARLSHRYV--- 385 Query: 346 RSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + ++M+ K ++ LE + + E ++D Sbjct: 386 ------SDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALSKESDA 439 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDP 458 A ++ + K LS + + L + E ++ D Sbjct: 440 ASQKRLNDICEELDVKEREYAELEEVWNAEKAALSGTQHIKSELEQARMNMEVARRAGDL 499 Query: 459 --MKMRMESEIRGLLKGMEM 476 M +I L K +++ Sbjct: 500 NRMSELQYGKIPELEKQLDL 519 >gi|32452329|emb|CAD59396.1| putative ClpB1 protein [Propionibacterium freudenreichii subsp. shermanii] Length = 729 Score = 171 bits (434), Expect = 4e-41 Identities = 37/267 (13%), Positives = 79/267 (29%), Gaps = 20/267 (7%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + L+ + + +LI Sbjct: 255 EFEERLKAVLNEIKSAEGQIITFIDELHTVVGAGASEGSMDASNMLKPLLARGELRLIGA 314 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ PS+E+ ++ E V+ T + Sbjct: 315 TTLDEYREHIEKDPALERRFQQVYVGEPSVEDTVA--ILRGLRERYEAHHKVRITDSALV 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A+ R + A D L D A + L+ME +I+ L V E Sbjct: 373 AAAQLSHRYITGRQLPDKAID--LVD--EAASRLRMEIDSSPEEIDTLRRQVDRLTMEQF 428 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEELKAQEN 451 + + D + +++ + + + + L+ + + Sbjct: 429 AVEKEEDPGSKARLARINSDLADAKEQLRGLEARWAAEKEGLNKVGELKTRIDALRTEAD 488 Query: 452 SQ-CDFDPMKM--RMESEIRGLLKGME 475 D D K + EI L K ++ Sbjct: 489 KHTRDGDLAKASEILYGEIPELNKQLD 515 >gi|48763004|ref|ZP_00267561.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rhodospirillum rubrum] Length = 870 Score = 171 bits (434), Expect = 4e-41 Identities = 31/256 (12%), Positives = 71/256 (27%), Gaps = 31/256 (12%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFI 288 +I +D + + + + ++ ++ + Sbjct: 270 EGEIILFIDEMHTLIGAGAGEGAMDASNLLKPALARGDLHCVGATTLNEYRKHVEKDAAL 329 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ P + + ++ E+ V+ + A R Sbjct: 330 ARRFQPVFVSEPGVADTI--SILRGIKEKYELHHGVRIADNALVAAATLSNRYI------ 381 Query: 349 LDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 DR L DKA A + L+ME K ++EL+ + + E + + + D A Sbjct: 382 ---TDRFLPDKAIDLMDEAASRLRMEVDSKPEALDELDRRIIQLKIEREALRKEKDIASE 438 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-----EERRQYLFEELKAQENSQCDFDP 458 T + + + A +E+ + +L + Sbjct: 439 ARLSDLEKELADLESQSATLTEDWKREKEGLAGSTRIKEQLEQARGDLDIAKRQANWARA 498 Query: 459 MKMRMESEIRGLLKGM 474 ++ I L + + Sbjct: 499 GELE-YGVIPDLERRL 513 >gi|66870845|gb|EAL98209.1| AAA ATPase, central region:Clp, N terminal [Arthrobacter sp. FB24] Length = 889 Score = 171 bits (434), Expect = 4e-41 Identities = 40/281 (14%), Positives = 78/281 (27%), Gaps = 40/281 (14%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------- 276 D+ A + L V + + SE + ++ S Sbjct: 241 DLASMVAGAKYRGEFEERLKAVLEEIKSSEGQ-IVTFIDELHTVVGAGASGDSSMDAGNM 299 Query: 277 -------------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 + + ++ + FQ+ PS+E+ G ++ Sbjct: 300 LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIG--ILRGLKER 357 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 E V + A R + A D L D A + L+ME +I Sbjct: 358 YEAHHKVSIADSALVAAATLSNRYISGRQLPDKAID--LVD--EAASRLRMEIDSAPEEI 413 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEA 435 ++L V E + D A E +++ + L+ Sbjct: 414 DQLRRQVDRLTMEELALANEKDAASVERLAALRADMADKKEALSALNARWEAEKAGLNHV 473 Query: 436 EERRQYLFEELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + + + E A E Q + D + E+ L + + Sbjct: 474 GDLKARIDELRSAAEKYQREGDLAAASRILYGELPALEREL 514 >gi|71891969|ref|YP_277699.1| ATP-dependent protease [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 858 Score = 171 bits (433), Expect = 4e-41 Identities = 39/279 (13%), Positives = 85/279 (30%), Gaps = 49/279 (17%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------------- 276 A + L V ED+ + ++ K+ Sbjct: 247 AGTKYRGEFEERLKSVLSDV-SKEDSNIILFIDELHTMVGAGKTDGAMDASNMLKPRLSR 305 Query: 277 ------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + ++ + FQ+ PS+E+ ++ E+ V Sbjct: 306 GELHCVGATTLDEYSKYIEKDAALERRFQKIFVSEPSVEDTIA--ILRGLKERYELHHNV 363 Query: 325 QDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEE 379 T + A R DR+L DKA A + ++++ K +++ Sbjct: 364 HITDPAIVAAAILSHRYI---------SDRQLPDKAIDLIDEAASSIRIQIDSKPEELDR 414 Query: 380 LESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR 439 LE + + E + ++D+A + ++ K ++S + + Sbjct: 415 LERRIIQLKLEQQALKKESDDASMKRLNLLTTELIQKEQNYINLEKEWKKEKVSLSNAQS 474 Query: 440 QYL-FEELK-AQENSQCDFDPMKM--RMESEIRGLLKGM 474 E+ K A + ++ D +M +I L K + Sbjct: 475 IKSDLEQAKIAIDQARRVGDLARMSELQYGKIPELEKKL 513 >gi|27360063|gb|AAO09001.1| ClpB protein [Vibrio vulnificus CMCP6] Length = 857 Score = 171 bits (433), Expect = 4e-41 Identities = 37/260 (14%), Positives = 82/260 (31%), Gaps = 29/260 (11%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + + +I +D + + + + + + + ++ Sbjct: 267 SKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D P++E+ ++ E+ V+ T + A R Sbjct: 327 PALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHHVEITDPAIVAAASLSHRYV--- 381 Query: 346 RSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + ++M+ K +++LE + + E + DE Sbjct: 382 ------SDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDE 435 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDP 458 A + + K LS + + L + E ++ D Sbjct: 436 ASEKRLRSLNEELNEKEREFAELEEIWNAEKAALSGTQHIKAALEQARMDMEFARRAGDL 495 Query: 459 MKM--RMESEIRGLLKGMEM 476 +M I L K +++ Sbjct: 496 SRMSELQYGRIPELEKQLDL 515 >gi|58039904|ref|YP_191868.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter oxydans 621H] Length = 866 Score = 171 bits (433), Expect = 5e-41 Identities = 34/266 (12%), Positives = 78/266 (29%), Gaps = 20/266 (7%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + +I +D + + + + Sbjct: 255 EFEERLKAVLKEIETAEGEIILFIDEMHTLVGAGRSDGAMDASNLIKPELARGTLHCVGA 314 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ PS+ + ++ E+ V+ T + Sbjct: 315 TTLDEYRKYIEKDAALARRFQPVFVGEPSVADTI--SILRGIKEKYELHHGVRITDNAIV 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A + L+M+ K ++EL+ + + E + Sbjct: 373 AAATLSNRYITDRFLPDKAID--LID--EAASRLRMQIDSKPEALDELDRRIIQLKIERE 428 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + + D A ++ +++ K R++ ++ ++ L E Sbjct: 429 AIRKEDDTASKDRLVALEAELADLEEQSDAMGAEWHAEKDRVNAIQKLKEQLDTARSDVE 488 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGM 474 +Q + K M I L + Sbjct: 489 VAQRQGNLGKASELMYGLIPNLEAQI 514 >gi|73667261|ref|YP_303277.1| AAA ATPase, central region:Clp, N terminal [Ehrlichia canis str. Jake] Length = 857 Score = 170 bits (432), Expect = 5e-41 Identities = 34/250 (13%), Positives = 78/250 (31%), Gaps = 19/250 (7%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDACNFIL 289 A+I +D + + + + + + ++ + Sbjct: 273 GAVILFIDELHTLVGAGATDGAMDASNLLKPALARGEIHCIGATTLDEYRQHIEKDAALA 332 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ P++ + ++ EI ++ + + R Sbjct: 333 RRFQPVFISEPTVNDTI--SILRGLKEKYEIHHGIRIMDSAIIAASTLSNRYITDRFLPD 390 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A + ++E K I+EL+ + + EA + + + E+ ++ Sbjct: 391 KAID--LID--EAASRARIEIDSKPEVIDELDRKIIQLKIEAGVLEKENTESSKQRLVKL 446 Query: 410 XXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM--RMES 465 SK+ K+++ + +E + L E +Q + K M Sbjct: 447 NEELDKLNIQAAELNSKWQAEKIKILKMQECAEKLDNARSDLEKAQRSGNLAKAGELMYG 506 Query: 466 EIRGLLKGME 475 I L K ++ Sbjct: 507 IIPELEKELK 516 >gi|42544975|gb|EAA67818.1| conserved hypothetical protein [Gibberella zeae PH-1] Length = 776 Score = 170 bits (432), Expect = 5e-41 Identities = 41/271 (15%), Positives = 88/271 (32%), Gaps = 31/271 (11%) Query: 224 FVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + + + + + + + Sbjct: 157 FEERLKKVLTEVEQAEGEVILFIDELHTLLGLGKAEGSIDASNLLKPALARGELQCCGAT 216 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ PS+E+ ++ E+ V+ T + Sbjct: 217 TLNEYRQIEKDVALARRFQPIIVSEPSVEDTI--SILRGIKDKYEVHHGVRITDGALVAA 274 Query: 335 AEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQA 389 A R DR L DKA A + LK++ + K I L+ + Q Sbjct: 275 ATLSNRYI---------TDRFLPDKAIDLMDEAASHLKLQHESKPEDIMRLDHKIMTIQI 325 Query: 390 EADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELK- 447 E + + ++D A +E +++ K R E+ ++ Q ++ K Sbjct: 326 ELESLRKESDVASKERREKLENDLKKLNEEISGLNARWEKERAEIESVKKIQEDLDKAKF 385 Query: 448 AQENSQCD---FDPMKMRMESEIRGLLKGME 475 A E +Q + ++R I L + + Sbjct: 386 ALEQAQREGNFGRASELR-FGVIPDLEQKLP 415 >gi|68171311|ref|ZP_00544710.1| AAA ATPase, central region:Clp, N terminal [Ehrlichia chaffeensis str. Sapulpa] Length = 857 Score = 170 bits (432), Expect = 6e-41 Identities = 32/250 (12%), Positives = 78/250 (31%), Gaps = 19/250 (7%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDACNFIL 289 A+I +D + + + + + + ++ + Sbjct: 273 GAVILFIDELHTLVGAGATDGAMDASNLLKPALARGEIHCIGATTLDEYRQHIEKDAALA 332 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ ++ + ++ E+ ++ + + R Sbjct: 333 RRFQPVFVSESTVNDTI--SILRGLKEKYEVHHGIRIMDSAIIAASTLSNRYITDRFLPD 390 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A + +++E K I+EL+ + + EA + + + E+ ++ Sbjct: 391 KAID--LID--EAASRVRIEIDSKPEVIDELDRKIIQLKIEAGVLEKENTESSKQRLAQL 446 Query: 410 XXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM--RMES 465 SK+ K+++ + +E + L E +Q + K M Sbjct: 447 SEELNKLSIQATELNSKWQAEKMKILKMQECVEKLDNARNDLEKAQRSGNLAKAGELMYG 506 Query: 466 EIRGLLKGME 475 I L K ++ Sbjct: 507 IIPELEKELK 516 >gi|56479246|ref|YP_160835.1| ClpB protein [Azoarcus sp. EbN1] Length = 860 Score = 170 bits (432), Expect = 6e-41 Identities = 35/269 (13%), Positives = 80/269 (29%), Gaps = 22/269 (8%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + + + + + + I Sbjct: 254 EFEERLKAVLKEIAQEEGRIIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGA 313 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ E+ V T + Sbjct: 314 TTLDEYRKYIEKDAALERRFQKVLVDEPSVESTIA--ILRGLQEKYELHHGVDITDPAIV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D A +KME K +++LE + + E + Sbjct: 372 AAAELSHRYITDRFLPDKAID--LID--EAAARIKMEIDSKPEVMDKLERRLIQLKIEQE 427 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELK 447 + + DEA ++ + + +E + L ++ Sbjct: 428 AVKRETDEASQKRLVLIRDEIDKLEREYANLDEIWRSEKASVQGSQHIKEEIEALRTQMA 487 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + +D + ++ L ++ Sbjct: 488 EMQRKGQ-YDKLAELQYGKLPQLEAQLKA 515 >gi|71547803|ref|ZP_00668357.1| AAA ATPase, central region:Clp, N terminal [Syntrophobacter fumaroxidans MPOB] Length = 873 Score = 170 bits (431), Expect = 7e-41 Identities = 36/269 (13%), Positives = 88/269 (32%), Gaps = 24/269 (8%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + I + ++ + + I Sbjct: 259 EFEERLKAVLQEIKESEGGILLFIDELHTIVGAGKAEGSMDAGNMLKPMLARGELHCIGA 318 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D P++E+ ++ E+ V+ + Sbjct: 319 TTLDEYRKYIEKDAALERRFQPVLVDQPTVEDTI--SILRGLKERYEVHHGVKIQDSALV 376 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D+ACA+ ++ E + +++E+ V + E Sbjct: 377 AAAVLSGRYITDRFLPDKAID--LVDEACAM--IRTEIDSRPEELDEVMRRVMQLEIEEV 432 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQEN- 451 + + D+A +E ++++ + +A ++ Q + EE++ Sbjct: 433 ALKKEKDKASQERLEALRKEIGELRARTDAMSAQWEAEK--QAIKKVQAIREEIEKVRRD 490 Query: 452 ---SQCDFDPMK--MRMESEIRGLLKGME 475 ++ FD K + L K ++ Sbjct: 491 IEVAERQFDLQKVAELKHGLMPDLEKKLK 519 >gi|66043993|ref|YP_233834.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Pseudomonas syringae pv. syringae B728a] Length = 854 Score = 170 bits (430), Expect = 1e-40 Identities = 36/255 (14%), Positives = 78/255 (30%), Gaps = 19/255 (7%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDAC 285 + +I +D + + + + + + ++ ++ Sbjct: 267 SKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D PS E+ ++ E+ V T + A+ R Sbjct: 327 AALERRFQKVLVDEPSEEDTIA--ILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 + A D L D A + ++ME K ++ LE + + EA + + DEA + Sbjct: 385 QLPDKAID--LID--EAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIKR 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEE-LKAQENSQCDFDP--MKM 461 + + + Q E+ + E ++ D M Sbjct: 441 LEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMAE 500 Query: 462 RMESEIRGLLKGMEM 476 I L + ++M Sbjct: 501 LQYGIIPDLERSLQM 515 >gi|17864015|gb|AAL47016.1| ClpB ATP protease [Paracoccidioides brasiliensis] Length = 792 Score = 169 bits (429), Expect = 1e-40 Identities = 39/272 (14%), Positives = 86/272 (31%), Gaps = 35/272 (12%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---- 276 L +KD+ +H +I +D + + + + + + Sbjct: 189 LKAVLKDLAKHE------GEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVG 242 Query: 277 -----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 + ++ + FQ+ D PS+E+ ++ E+ V+ + Sbjct: 243 ATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVKILDSAI 300 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRL 386 A+ R DR+L DKA A + +KME K +++LE + Sbjct: 301 IAAAKMSHRYI---------TDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLERRLIQ 351 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + + + + D R + + + ++ + L + Sbjct: 352 LKLQLEAVKKDEDAGSRAEVSHLEKQIEDVQKDYNDLEEVWKSEKTLVEGTKQIQAQLDQ 411 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 A + +Q + D +M I L K + Sbjct: 412 ARIALQKAQRENDLGEMSRLQYGVIPELEKQL 443 >gi|6458777|gb|AAF10620.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Deinococcus radiodurans] Length = 875 Score = 169 bits (429), Expect = 1e-40 Identities = 37/251 (14%), Positives = 77/251 (30%), Gaps = 18/251 (7%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP--------LDACN 286 +I +D + I + + + + LI ++ Sbjct: 282 VKSAGEIILFVDEIHTIVGAGKTEGSPDAGNMLKPALARGELHLIGATTLDEYREIEKDA 341 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR 346 + FQ D PS+E+ ++ ++ V+ T + A R + Sbjct: 342 ALERRFQPVFVDEPSVEDTI--SILRGIKERYQVHHNVEITDPALVAAATLSNRYITDRQ 399 Query: 347 SVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAE 406 A D L D++ L+M + +I++L + E + + + D + Sbjct: 400 LPDKAID--LIDES--AARLRMALESSPERIDQLSRRKLQLEIEREALKREKDVDSQNRL 455 Query: 407 XXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEELKAQENSQCDFDPMKM--R 462 S++ R A E+R+ L E ++ D+D + Sbjct: 456 LDIENQLKTLTDELNEVRSRWEAERGEVAALREKREKLDAVRTQIEKARRDYDLEEAARL 515 Query: 463 MESEIRGLLKG 473 E+ L K Sbjct: 516 EYGELPALEKD 526 >gi|69954129|ref|ZP_00640937.1| AAA ATPase, central region:Clp, N terminal [Shewanella frigidimarina NCIMB 400] Length = 865 Score = 169 bits (429), Expect = 1e-40 Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 20/268 (7%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + + +I +D + + + + + Sbjct: 262 EFEERLKAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGA 321 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D PS+E+ ++ E+ V+ T + Sbjct: 322 TTLDEYRQYIEKDAALERRFQKVIVDEPSVEDTIA--ILRGLKERYELHHHVEITDPAIV 379 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R + A D L D A + ++M+ K ++ LE + E Sbjct: 380 AAATMSHRYISDRKLPDKAID--LID--EAASSIRMQIDSKPEVLDRLERRAIQLKLEEQ 435 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEELKAQE 450 ++DEA R+ + + + A + + L + E Sbjct: 436 ALSKESDEASRKRLEFLQHELRDVESKAAEMNEIWHTEKAALAGTQHIKADLEQARMDLE 495 Query: 451 NSQCDFDP--MKMRMESEIRGLLKGMEM 476 ++ D M I L K +++ Sbjct: 496 VARRAGDLTRMSELQYGRIPELEKQLDL 523 >gi|12722113|gb|AAK03788.1| ClpB [Pasteurella multocida subsp. multocida str. Pm70] Length = 855 Score = 169 bits (429), Expect = 1e-40 Identities = 41/271 (15%), Positives = 82/271 (30%), Gaps = 30/271 (11%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + + +I +D + + + + + + Sbjct: 253 EFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGA 312 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ P++E+ ++ EI VQ T + Sbjct: 313 TTLDEYRQYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKERYEIHHHVQITDPAIV 370 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR+L DKA A + ++ME K ++ LE + Sbjct: 371 AAATLSHRYV---------SDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQL 421 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 + E Q + D+A R+ + + LS + + L Sbjct: 422 KLEQQALQKEDDDASRKRLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDSA 481 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 E ++ D KM I L K + Sbjct: 482 KTQMEQARRASDFAKMSELQYGVIPALEKQL 512 >gi|21204024|dbj|BAB94722.1| clpB [Staphylococcus aureus subsp. aureus MW2] Length = 869 Score = 169 bits (429), Expect = 1e-40 Identities = 39/269 (14%), Positives = 92/269 (34%), Gaps = 21/269 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + + +I +D + + + ++ + + Sbjct: 253 EFEERLKAVLKEVKES--DGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCI 310 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + ++ + + FQ+ P +E+ ++ E+ V+ R Sbjct: 311 GATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTI--SILRGLKERYEVYHGVRIQDRA 368 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + AE R A D L D+ACA ++ E +++++ V + E Sbjct: 369 LVAAAELSDRYITDRFLPDKAID--LVDQACA--TIRTEMGSNPTELDQVNRRVMQLEIE 424 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSK--YLKLRLSEAEERRQYLFEELKA 448 + ++D A ++ S+ K +++ +E+R L E +A Sbjct: 425 ESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDESRQA 484 Query: 449 QENSQ--CDFDPMKMRMESEIRGLLKGME 475 E++Q + + I L K + Sbjct: 485 LEDAQTNNNLEKAAELQYGTIPQLEKELR 513 >gi|23474967|ref|ZP_00130258.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Desulfovibrio desulfuricans G20] Length = 863 Score = 169 bits (428), Expect = 2e-40 Identities = 33/274 (12%), Positives = 82/274 (29%), Gaps = 30/274 (10%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + I + ++ + + I Sbjct: 259 EFEERLKAVLKEVEQAEGRIIMFIDELHTIVGAGKTDGAMDAGNLLKPMLARGELHCIGA 318 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D P++E+ ++ E+ V+ + + Sbjct: 319 TTLDEYRKYIEKDPALERRFQPLVVDEPTVEDTI--SILRGLKERFEVHHGVRISDSALV 376 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 R DR+L DKA A ++ E +++E + Sbjct: 377 EAVTLSNRYI---------ADRQLPDKAIDLIDEAAALIRTEIDSLPAELDEANRKIMQL 427 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 + E + + + D A RE +++ + + + ++ + Sbjct: 428 EIEREALRRETDAASRERLQKLENELAELREVQAGLNTQWEREKGSIDSVRALKEDIERT 487 Query: 446 LKAQENSQCDFDP--MKMRMESEIRGLLKGMEMT 477 + E ++ ++D S + L K + T Sbjct: 488 RRQIEEAERNYDLNRAAELKYSVLHDLEKRLAAT 521 >gi|15023863|gb|AAK78935.1| ATPase with chaperone activity, two ATP-binding domains [Clostridium acetobutylicum ATCC 824] Length = 865 Score = 169 bits (428), Expect = 2e-40 Identities = 39/267 (14%), Positives = 89/267 (33%), Gaps = 20/267 (7%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + I + ++ + + I Sbjct: 258 EFEERLKAVLKEVERSEGKIILFIDEIHTIVGAGKTEGAMDAGNIIKPMLARGELHCIGA 317 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D P++++ ++ EI V+ + Sbjct: 318 TTFDEYRKYIEKDKALERRFQKVQIDEPTVDD--AISILRGLKERFEIHHGVRIHDNAIV 375 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A+ R A D L D+A A+ ++ME +++ L+ + + E + Sbjct: 376 AAAKLSDRYITGRFLPDKAID--LIDEAGAM--VRMEIDSMPTELDMLKRKIFQMEIEKE 431 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEELKAQ-E 450 ++D+ RE T+KY K + + + +E++ Q E Sbjct: 432 ALSKESDKFSRERLESIQKELSDLKDKDKAMTAKYDKEKAQIQGIKELKTKLDEIRGQIE 491 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGME 475 ++ ++D K E+ L +E Sbjct: 492 KAEREYDLNKAAELKYGEVPKLEHEIE 518 >gi|50084451|ref|YP_045961.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1] Length = 859 Score = 168 bits (427), Expect = 2e-40 Identities = 35/255 (13%), Positives = 77/255 (30%), Gaps = 29/255 (11%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDACNFIL 289 +I +D + + + + + + + ++ + Sbjct: 268 GQVILFIDELHTLVGAGKSDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALE 327 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ+ D PS+E+ ++ E+ V+ + A+ R Sbjct: 328 RRFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVKILDSAIIAAAKMSHRYI------- 378 Query: 350 DACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR+L DKA A + +KME K ++ LE + + + + + D + Sbjct: 379 --TDRQLPDKAIDLIDEAASRIKMELDSKPEALDRLERRIIQLKMQLEAVKKDEDLGSKA 436 Query: 405 AEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFEELKAQENSQCDFDPMKM- 461 + + ++ + L + A E +Q + D + Sbjct: 437 EVKHLEEQISIVQKEYNDMEEVWRAEKALVEGTKDAQVKLDQARIAFEKAQREGDLAEAA 496 Query: 462 -RMESEIRGLLKGME 475 I L K +E Sbjct: 497 RLQYGVIPELQKQLE 511 >gi|57866505|ref|YP_188155.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Staphylococcus epidermidis RP62A] Length = 869 Score = 168 bits (427), Expect = 2e-40 Identities = 38/268 (14%), Positives = 91/268 (33%), Gaps = 21/268 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + + +I +D + + + ++ + + Sbjct: 253 EFEERLKAVLKEVKESE--GRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCI 310 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + ++ + + FQ+ P +E+ ++ E+ V+ R Sbjct: 311 GATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTI--SILRGLKERYEVYHGVRIQDRA 368 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + AE R A D L D+ACA ++ E +++++ V + E Sbjct: 369 LVAAAELSDRYITDRFLPDKAID--LVDQACA--TIRTEMGSNPTELDQVNRRVMQLEIE 424 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + ++D + S+ K ++++ +E+R L +A Sbjct: 425 ESALKNESDNPSKHRLEELQEELSNEKEKQSSLKSRVEQEKEKIAKVQEKRAELDSSRQA 484 Query: 449 QENSQCDFDPMKM--RMESEIRGLLKGM 474 E++Q + + K I L K + Sbjct: 485 LEDAQTEGNLEKAAELQYGTIPQLEKEL 512 >gi|67985293|gb|EAM73247.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Kineococcus radiotolerans SRS30216] Length = 878 Score = 168 bits (427), Expect = 2e-40 Identities = 35/267 (13%), Positives = 77/267 (28%), Gaps = 20/267 (7%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + D + ++ +D + + ++ + + Sbjct: 254 EFEERLKAVLQEIQDSDGQVVTFIDELHTVVGAGAGEGAMDAGNMLKPMLARGQLRLVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + ++ + FQ+ PS+ + G ++ E V + + Sbjct: 314 TTLDEYRERIEKDPALERRFQQVFVGEPSVPDTIG--ILRGLRERYEAHHKVAISDAALV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R + A D L D A + L+ME +I+EL V + E Sbjct: 372 AAATLSDRYISGRQLPDKAID--LVD--EAASRLRMEIDSSPVEIDELRRAVDRMRMEEL 427 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQE 450 + D A R T+++ + + + + + E E Sbjct: 428 ALSKEEDAASRNRLETLRAQLADKQEQLTALTARWEQEKAGLNRVGDLKHQVDELRSQAE 487 Query: 451 NSQCDFDP--MKMRMESEIRGLLKGME 475 Q + D + I L + Sbjct: 488 RLQREGDLGRASEILYGRIPALEAELR 514 >gi|75429872|ref|ZP_00732490.1| ATPases with chaperone activity, ATP-binding subunit [Actinobacillus succinogenes 130Z] Length = 636 Score = 168 bits (427), Expect = 3e-40 Identities = 35/272 (12%), Positives = 81/272 (29%), Gaps = 32/272 (11%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + ++I +D + + + + + + Sbjct: 34 EFEERLKAVLKELAQEEGSVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGA 93 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ PS+E+ ++ E+ V+ T + Sbjct: 94 TTLDEYRQYIEKDAALERRFQKVFVGEPSVEDTIA--ILRGLQERYELHHHVEITDPAIV 151 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR+L DKA A + ++ME K +++LE + Sbjct: 152 AAATLSHRYI---------SDRQLPDKAIDLIDEAASSIRMEIDSKPLPLDKLERRIIQL 202 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQYL 442 + E + + DEA R+ + + + + Sbjct: 203 KLEQQALKKEDDEASRKRLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENA 262 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 +++ + D + M I L K + Sbjct: 263 RTQMEQARRAG-DLNKMSELQYGTIPALEKQL 293 >gi|8575704|gb|AAF78058.1| ClpB protease [secondary endosymbiont of Glycaspis brimblecombei] Length = 857 Score = 168 bits (427), Expect = 3e-40 Identities = 35/255 (13%), Positives = 77/255 (30%), Gaps = 19/255 (7%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 ++I +D + + + + + + + ++ Sbjct: 267 AKQEGSVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ P++E+ ++ E+ VQ T + A R Sbjct: 327 AALERRFQKVYVAEPTVEDTIA--ILRGLKERYELHHHVQITDPAIVAAASLSNRYISDR 384 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 A D L D A L+M+ K ++ LE V + E + ++D+A ++ Sbjct: 385 MLPDKAID--LID--EAGASLRMQMDSKPEALDRLERRVTQLKLEQQALKKESDDASKKR 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFEELKAQENSQCDFDPMKM-- 461 ++ + + + L + E ++ D KM Sbjct: 441 LKMLEEELTEKEREYSELEEEWKAEKAELTGTQHIKAELENARISMEQARRSGDLAKMSE 500 Query: 462 RMESEIRGLLKGMEM 476 +I L K +E Sbjct: 501 LQYGKIPELEKQLEA 515 >gi|32423740|gb|AAP81264.1| ClpB [Pseudomonas aeruginosa] Length = 854 Score = 168 bits (426), Expect = 3e-40 Identities = 37/268 (13%), Positives = 82/268 (30%), Gaps = 20/268 (7%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + +I +D + + + + + + Sbjct: 254 EFEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D PS E+ ++ E+ V T + Sbjct: 314 TTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIA--ILRGLKERYEVHHGVSITDGAII 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A+ R + A D L D A + ++ME K +++ L+ + + E + Sbjct: 372 AAAKLSHRYITDRQLPDKAID--LID--EAASRIRMEIDSKPEELDRLDRRLIQLKIERE 427 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEELKAQ-E 450 + + DEA R+ + + + Q E+ K + E Sbjct: 428 ALKKEDDEATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEME 487 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGMEM 476 ++ D M I L + ++M Sbjct: 488 AARRKGDLESMARIQYQTIPDLERSLQM 515 >gi|71550106|ref|ZP_00670254.1| AAA ATPase, central region:Clp, N terminal [Nitrosomonas eutropha C71] Length = 863 Score = 168 bits (426), Expect = 3e-40 Identities = 38/266 (14%), Positives = 83/266 (31%), Gaps = 20/266 (7%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + D I +D + + + + + + Sbjct: 254 EFEERLKTVLKELAQDEGRTIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D P +E ++ E+ V+ T + Sbjct: 314 TTLDEYRKYVEKDAALERRFQKVLVDEPGVEATIA--ILRGLQEKYELHHGVEITDPAIV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D A ++ME+ K +++L+ + + E + Sbjct: 372 AAAELSHRYITDRFLPDKAID--LID--EAAARIRMEQDSKPEVMDKLDRRLIQLKIERE 427 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTS--KYLKLRLSEAEERRQYLFEELKAQE 450 + + DEA ++ K K R ++E ++ L + + +E Sbjct: 428 AVKKEKDEASKKRLALLEEEIEKLEREYADLDEILKAEKSRAKGSQEIKEELEKLRREEE 487 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGM 474 ++ D K + I L + Sbjct: 488 AARRKGDLQKASELLYGRIPQLETQL 513 >gi|26987361|ref|NP_742786.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas putida KT2440] Length = 854 Score = 168 bits (426), Expect = 3e-40 Identities = 35/260 (13%), Positives = 81/260 (31%), Gaps = 29/260 (11%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDAC 285 + +I +D + + + + + + ++ ++ Sbjct: 267 SKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ + PS E+ ++ E+ V T + A+ R Sbjct: 327 AALERRFQKVLVEEPSEEDTIA--ILRGLKERYEVHHKVAITDGAIIAAAKLSHRYI--- 381 Query: 346 RSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + ++ME K ++ L+ + + E+ + + DE Sbjct: 382 ------TDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDE 435 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEE-LKAQENSQCDFDP 458 A ++ + + + Q E+ + E ++ D Sbjct: 436 AAKKRLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDL 495 Query: 459 --MKMRMESEIRGLLKGMEM 476 M I L + ++M Sbjct: 496 NRMAELQYGVIPDLERSLQM 515 >gi|18145090|dbj|BAB81134.1| clpB protein [Clostridium perfringens str. 13] Length = 866 Score = 168 bits (425), Expect = 4e-40 Identities = 37/269 (13%), Positives = 88/269 (32%), Gaps = 21/269 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V + + ++ +D + I + ++ + + I Sbjct: 259 EFEERLKAVLKEVQSSE--GKILLFIDEIHTIVGAGKTDGAMDAGNLIKPMLARGELHCI 316 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ + P++E ++ EI ++ Sbjct: 317 GATTFDEYRQYIEKDKALERRFQPVIVEEPTVEETV--SILRGLKERFEIHHGIRIHDSA 374 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A+ R + A D L D+A A+ ++ E +++ + + + + E Sbjct: 375 IVAAAKLSHRYIQDRYLPDKAID--LIDEAGAM--IRSEIDSLPTELDIIRRKILMLETE 430 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKA 448 + + D+A +E T KY K + +S + + L E Sbjct: 431 KEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHISAVRDLKAELDEARGL 490 Query: 449 QENSQCDFDPMK--MRMESEIRGLLKGME 475 E + ++D K +I L + ++ Sbjct: 491 AEKYEREYDLNKVAELKYGKIPELERKIK 519 >gi|17428350|emb|CAD15037.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Ralstonia solanacearum] Length = 862 Score = 168 bits (425), Expect = 4e-40 Identities = 33/256 (12%), Positives = 74/256 (28%), Gaps = 21/256 (8%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDAC 285 + I +D + + + + + + I ++ Sbjct: 266 AKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKD 325 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D PS+E ++ E+ V+ T + AE R Sbjct: 326 AALERRFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 A D L D A +KME K +++L+ + + E + + + DEA ++ Sbjct: 384 FLPDKAID--LID--EAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQKR 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELKAQENSQCDFDPMK 460 + + + +E + E+ + D + Sbjct: 440 LELIEQEIERLQKEYADLEEIWKAEKGAAQGAAAVKEEIDRVKLEIARLQREG-KLDKVA 498 Query: 461 MRMESEIRGLLKGMEM 476 + L ++ Sbjct: 499 ELQYGRLPELEGKLKA 514 >gi|66782797|gb|EAL83760.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Deinococcus geothermalis DSM 11300] Length = 861 Score = 168 bits (425), Expect = 4e-40 Identities = 37/279 (13%), Positives = 90/279 (32%), Gaps = 36/279 (12%) Query: 223 GFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + I + + + + +I Sbjct: 255 EFEERLKAVIEEVVQSAGEVILFVDELHTIVGAGKTEGSPDAGNMLKPALARGELHMIGA 314 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D PS+E+ ++ + V T + Sbjct: 315 TTLSEYREIEKDPALERRFQPVFVDEPSVEDTI--SILRGIKEKYQAHHNVNLTDPALVA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQ 388 A+ R DR+L DKA A L+M + +I++LE + Sbjct: 373 AAQLSHRYI---------TDRQLPDKAIDLIDEAAARLRMALESSPERIDQLERRKLQLE 423 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELK 447 E + + + D + S++ R +A ++ ++++ Sbjct: 424 IEREALKKEKDVDSQNRLLDIEDQLKAITDELAEVRSRWEAERQEVQALREKRDQLDQVR 483 Query: 448 AQ-ENSQCDFDPMKM---------RMESEIRGLLKGMEM 476 + E ++ ++D K ++E +++ L + ++ Sbjct: 484 TEIEKARREYDLGKAAQLEYGTLPQLEKDVQELERKLKA 522 >gi|32422771|ref|XP_331829.1| hypothetical protein [Neurospora crassa] Length = 810 Score = 167 bits (424), Expect = 5e-40 Identities = 38/274 (13%), Positives = 83/274 (30%), Gaps = 32/274 (11%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 + +K V +I +D + + + + + + + Sbjct: 181 DFEERLKKVLGEVQEA--NGEVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGELQCC 238 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + FQ P++E+ ++ E+ V+ T + Sbjct: 239 GATTMTEYRQIEKDVALARRFQPIIVSEPTVEDTI--SILRGIKEKYEVHHGVRITDGAL 296 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRL 386 A R DR L DKA A + L+++++ K I+ L+ + Sbjct: 297 VAAATYSNRYI---------TDRFLPDKAIDLMDEAASSLRLQQESKPDDIQRLDQKIMT 347 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-----EAEERRQY 441 Q E + + + D A E T ++LK + + + Sbjct: 348 IQIELESLRKEKDVASVERREKLEADLKKYQDEVAVLTERWLKEKAEIDSIKQTQAELDR 407 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 EL+ + + ++R I L K + Sbjct: 408 ARIELEQAQRTGNFARASELR-FGVIPNLEKKLP 440 >gi|49240131|emb|CAF26578.1| ATP-dependent clp protease, ATP-binding subunit clpB [Bartonella quintana str. Toulouse] Length = 879 Score = 167 bits (424), Expect = 5e-40 Identities = 35/268 (13%), Positives = 79/268 (29%), Gaps = 20/268 (7%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + A +I +D + + + + + + Sbjct: 255 EFEERLKAVLAEVQAENGQIILFIDELHNLVGAGKSDGPMDASNLLKPALARGELHCVGA 314 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ P+L++ ++ E V+ + Sbjct: 315 TTLDEYRKYVEKDAALARRFQPVFVPEPTLDDTI--SILRGIKEKYEQHHKVRLADSALI 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A L+M+ K +++ ++ + + E + Sbjct: 373 AAARLSNRYITDRFLPDKAID--LID--EAAARLRMQVDSKPEELDAIDRRILQLKIERE 428 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + + +E T+ + K +L A + ++ L E A Sbjct: 429 ALKTDVEPTAKERLKIVQDELNTLEQKSTEMTTAWQAEKQKLGHAADLKKQLDEARNALA 488 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGMEM 476 +Q + K S I L K + + Sbjct: 489 IAQRNGQFQKAGELAYSVIPELEKQLSV 516 >gi|49476075|ref|YP_034116.1| ATP-dependent clp protease, ATP-binding subunit clpB [Bartonella henselae str. Houston-1] Length = 859 Score = 167 bits (424), Expect = 6e-40 Identities = 38/266 (14%), Positives = 78/266 (29%), Gaps = 20/266 (7%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + A +I +D + + + + + + Sbjct: 255 EFEERLKAVLAEVQAENGQIILFIDELHNLVGAGKSDGPMDASNLLKPALARGELHCVGA 314 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ P+LE+ ++ E V+ + Sbjct: 315 TTLDEYRKYVEKDAALARRFQPVFVPEPTLEDTI--SILRGIKEKYEQHHKVRLADSALI 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A L+M+ K +++ L+ + + E + Sbjct: 373 AAARLSNRYITDRFLPDKAID--LID--EAAARLRMQVDSKPEELDALDRRILQLKIERE 428 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + + +E T+ + K +L A + ++ L E A Sbjct: 429 ALKTDVEPTAKERLKTVQAELETLEQQSREMTTAWQAEKQKLGHAADLKKQLEEARNALA 488 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGM 474 +Q D K S I L K + Sbjct: 489 IAQRDGQFQKAGELAYSVIPQLEKQL 514 >gi|56460289|ref|YP_155570.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones [Idiomarina loihiensis L2TR] Length = 857 Score = 167 bits (423), Expect = 6e-40 Identities = 26/256 (10%), Positives = 78/256 (30%), Gaps = 21/256 (8%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + + +I +D + + + + + + + ++ Sbjct: 267 SKEEGRIILFIDEMHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ + P++E+ ++ E+ V+ T + A R Sbjct: 327 AALERRFQKVLVEEPNVEDTIA--ILRGLKERYELHHSVEITDPAIVAAASLSHRYISDR 384 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 + A D L D A + ++M+ K ++ LE + + E Q + D+A ++ Sbjct: 385 KLPDKAID--LID--EAASSIRMQIDSKPEDLDRLERRIIQLKLERQALQKEKDDASKKR 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQYLFEELKAQENSQCDFDPMK 460 + + + + + ++ + + Sbjct: 441 LEILHDELDEQERKYEELEEVWNTEKAAVQGTQHIKAQLEQARTDMDIARRAGDLNRMSE 500 Query: 461 MRMESEIRGLLKGMEM 476 ++ I L + +++ Sbjct: 501 LQ-YGRIPELERQLDL 515 >gi|69945234|ref|ZP_00636365.1| AAA ATPase, central region:Clp, N terminal [Shewanella denitrificans OS-217] Length = 862 Score = 167 bits (423), Expect = 6e-40 Identities = 33/268 (12%), Positives = 80/268 (29%), Gaps = 20/268 (7%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + + +I +D + + + + + Sbjct: 254 EFEERLKAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ + PS+E+ ++ E+ V+ T + Sbjct: 314 TTLDEYRQYIEKDAALERRFQKVLVNEPSVEDTIA--ILRGLKERYELHHHVEITDPAIV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R + A D L D A + ++M+ K ++ LE + E Sbjct: 372 AAASMSHRYISDRKLPDKAID--LID--EAASSIRMQIDSKPEVLDRLERRAIQLKLEEQ 427 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEELKAQE 450 + D+A R+ + + + A + + L + + Sbjct: 428 ALSKETDDASRKRLEHLQLELKDVSAKASELNEIWHTEKAALAGTQHIKADLEQARMDLD 487 Query: 451 NSQCDFDP--MKMRMESEIRGLLKGMEM 476 ++ D M I L K +++ Sbjct: 488 VARRAGDLTRMSELQYGRIPELEKQLDL 515 >gi|71543204|ref|ZP_00664602.1| AAA ATPase, central region:Clp, N terminal [Syntrophomonas wolfei str. Goettingen] Length = 862 Score = 167 bits (423), Expect = 6e-40 Identities = 36/273 (13%), Positives = 84/273 (30%), Gaps = 30/273 (10%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + D +I +D + + ++ + + Sbjct: 253 EFEERLKAVLKEVEDSAGQVILFIDELHTVVGAGAAEGAMDASNLLKPMLARGELRAIGA 312 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 S+ ++ + FQ + PS+E+ ++ E+ V+ + Sbjct: 313 TTISEYRKHIEKDAALERRFQPIMVNPPSVEDTI--SILRGLKERYEVHHGVRIQDSALV 370 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR L DKA A L+ E +++E+ + Sbjct: 371 AAAVLSDRYI---------SDRFLPDKAIDLMDEAAARLRTEIDSMPAELDEITRRIMQL 421 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEE 445 + EA + DEA RE +++ K +S + ++ + + Sbjct: 422 EIEAAALGKEKDEASRERLEDLLKELQDLKSEAEVMQAQWQAEKEAISRVGQLKRDIEDC 481 Query: 446 LKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 E ++ ++D + + L + ++ Sbjct: 482 RYEMEKAEREYDLNRIAELKYGRLNELERKLKA 514 >gi|33602268|ref|NP_889828.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica RB50] Length = 865 Score = 167 bits (423), Expect = 6e-40 Identities = 33/269 (12%), Positives = 75/269 (27%), Gaps = 22/269 (8%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D I +D + + + + + + I Sbjct: 253 EFEERLKAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGA 312 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ P +E+ ++ E+ V+ T + Sbjct: 313 TTLDEYRKYIEKDAALERRFQKVLVGEPDVESTIA--ILRGLQERYELHHGVEITDPAIV 370 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D A ++ME K ++ L+ + + E + Sbjct: 371 AAAELSHRYITDRFLPDKAID--LID--EAGARIRMEIDSKPEVMDRLDRRIIQLKIERE 426 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQYLFEELK 447 + + D+A Y + + +E + E+ Sbjct: 427 AVKKETDDASMRRLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMA 486 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + FD + ++ L ++ Sbjct: 487 ELQRKGQ-FDKLAELQYGKLPELEARLKA 514 >gi|37523146|ref|NP_926523.1| endopeptidase Clp ATP-binding chain B [Gloeobacter violaceus PCC 7421] Length = 872 Score = 167 bits (423), Expect = 7e-40 Identities = 33/273 (12%), Positives = 86/273 (31%), Gaps = 30/273 (10%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + + ++ + + + I Sbjct: 257 EFEERLKAVLNEVTKSEGQIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGA 316 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D P++E+ ++ E+ V+ + + Sbjct: 317 TTLDEYRKYIEKDAALERRFQQVYVDQPTVEDTI--SILRGLKERYEVHHGVRISDSALV 374 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR L DKA A LKME K ++E++ + Sbjct: 375 AAAVLSHRYI---------SDRFLPDKAIDLMDEAAAKLKMEITSKPEALDEVDRKILQL 425 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 + E ++D A R+ +++ + + + + ++ + + Sbjct: 426 EMERLSLAKESDAASRDRLERLEKELADLKEEQRSLNAQWQAEKDIIDQVQAVKEEIDQV 485 Query: 446 LKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + ++ D+D ++ L K ++ Sbjct: 486 NVQIQQAERDYDLNRAAELKYGKLSELQKRLDA 518 Score = 47.9 bits (113), Expect = 6e-04 Identities = 35/269 (13%), Positives = 87/269 (32%), Gaps = 40/269 (14%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K + + A F+ + ++ I RG ++ ++ Sbjct: 312 RCIGATTLDEYRKYIEKDAALERRFQQVYVDQPTVEDTISILRGLKE------RYEVHHG 365 Query: 271 IEKLKSKLIDPLDACNFIL--MFFQECDSDSPSLENGEGG-FLIAPQDACNEIAEVVQDT 327 + S L+ + + F + D + + + +A +E+ + Sbjct: 366 VRISDSALVAAAVLSHRYISDRFLPDKAIDLMDEAAAKLKMEITSKPEALDEVDRKILQL 425 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELE---SIV 384 + +A+E +R L+ ++EL D L + Q +K I++++ + Sbjct: 426 EMERLSLAKESDAA---SRDRLERLEKELADLKEEQRSLNAQWQAEKDIIDQVQAVKEEI 482 Query: 385 RLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE 444 + + D R ++ +LSE ++R + Sbjct: 483 DQVNVQIQQAERDYDLNR---------------------AAELKYGKLSELQKRLDAADK 521 Query: 445 ELKAQENSQCDFDPMKMRMESEIRGLLKG 473 +L + S + E +I ++ Sbjct: 522 QLSETQTSGRSL-LREEVTEEDIAEIISK 549 >gi|23335984|ref|ZP_00121214.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Bifidobacterium longum DJO10A] Length = 894 Score = 167 bits (423), Expect = 7e-40 Identities = 35/249 (14%), Positives = 74/249 (29%), Gaps = 19/249 (7%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + I ++ + + +LI ++ + Sbjct: 277 GQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALE 336 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ+ PS+E+ ++ E V + A R + Sbjct: 337 RRFQQVFVGEPSVEDTIA--ILRGLKQRYEAHHKVTIGDDALVAAATLSNRYISGRQLPD 394 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A L+ME +I+EL+ V + E + D A +E Sbjct: 395 KAID--LVD--EAAAHLRMELDSSPEEIDELQRKVTRLEMEEMQLKKAEDPASKERLGKL 450 Query: 410 XXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQENSQCDFDPMKM--RMES 465 +++ + + + R L + + + + + + Sbjct: 451 QAELADTREKLSGLKARWDAEQAGHNKVGDLRAKLDDLRVQADKYTREGNLAEASKILYG 510 Query: 466 EIRGLLKGM 474 EI + K + Sbjct: 511 EIPSIQKEL 519 >gi|47573811|ref|ZP_00243848.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rubrivivax gelatinosus PM1] Length = 867 Score = 167 bits (423), Expect = 7e-40 Identities = 37/270 (13%), Positives = 83/270 (30%), Gaps = 23/270 (8%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V + A D I +D + + + + + + I Sbjct: 253 EFEERLKSVLKEVA--QDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCI 310 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ+ PS+E ++ E+ V+ T Sbjct: 311 GATTLDEYRKYVEKDAALERRFQKVLVGEPSVEATIA--ILRGLQEKYEVHHGVEITDPA 368 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + AE R A D L D A +K+E K ++ L+ + + E Sbjct: 369 IVAAAELSHRYITDRFLPDKAID--LID--EAAAKVKIEIDSKPEVMDRLDRRLIQLKIE 424 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEE 445 + + + DEA ++ + + + +E + + Sbjct: 425 REAVRKEKDEASQKRFGLIEEDIAKLEREAADLDEVWKAEKATAQGSAHLKEDIDRIRTQ 484 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKGME 475 ++ + DF+ + ++ L K ++ Sbjct: 485 IEEFKRKG-DFNKVAELQYGKLPELEKKLK 513 >gi|68209271|ref|ZP_00561312.1| AAA ATPase, central region:Clp, N terminal [Desulfitobacterium hafniense DCB-2] Length = 853 Score = 167 bits (423), Expect = 7e-40 Identities = 31/267 (11%), Positives = 80/267 (29%), Gaps = 19/267 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------ 276 F + + + E +I +D + + ++ + + Sbjct: 246 EFEERLKAVLKEVQEREDIILFIDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMVGAT 305 Query: 277 ---KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + FQ +PS+E+ ++ E V+ T + Sbjct: 306 TLDEYRKYIEKDAALERRFQPVTVGAPSVEDTI--SILRGLKERYETHHGVRITDGAIIA 363 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A ++ME ++++++ + + E + Sbjct: 364 AAVLSDRYISDRFLPDKAID--LID--EAAARMRMEITSDPYELDQIKRRILQLEIEREA 419 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQEN 451 + + DE +E ++ + L+ ++ + + E Sbjct: 420 LKKEKDEGSKERLEKIEEDLANLKEERSALEAQLQGEREVLTRINSLKEDIDQNRLKMEQ 479 Query: 452 SQC--DFDPMKMRMESEIRGLLKGMEM 476 +Q D++ + L K + Sbjct: 480 AQQAFDYNKAAELQYGILPKLEKELNA 506 >gi|52209532|emb|CAH35485.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243] Length = 876 Score = 167 bits (423), Expect = 7e-40 Identities = 34/254 (13%), Positives = 79/254 (31%), Gaps = 19/254 (7%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDAC 285 D I +D + + + + + + I ++ Sbjct: 278 AKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKD 337 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D PS+E ++ E+ V+ T + AE R Sbjct: 338 AALERRFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 395 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 A D L D A + +KME K ++++L+ + + E + + + DEA ++ Sbjct: 396 FLPDKAID--LID--EAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQKR 451 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEELKAQ-ENSQCDFDPMK--M 461 + + + + + ++++A Q + K Sbjct: 452 LALIEEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVAE 511 Query: 462 RMESEIRGLLKGME 475 ++ L ++ Sbjct: 512 LQYGKLPQLEARLK 525 >gi|75853631|ref|ZP_00761428.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Vibrio sp. Ex25] Length = 857 Score = 167 bits (423), Expect = 7e-40 Identities = 36/260 (13%), Positives = 80/260 (30%), Gaps = 29/260 (11%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + +I +D + + + + + + + ++ Sbjct: 267 AKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D P++E+ ++ E+ V+ T + A R Sbjct: 327 AALERRFQKVLVDEPTVEDTVA--ILRGLKERYELHHHVEITDPAIVAAASLSHRYV--- 381 Query: 346 RSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + ++++ K +++LE + + E + DE Sbjct: 382 ------SDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDE 435 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDP 458 A + + K LS + + L + E ++ D Sbjct: 436 ASEKRLKALNEELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDL 495 Query: 459 --MKMRMESEIRGLLKGMEM 476 M I L K +++ Sbjct: 496 NRMSELQYGRIPELEKQLDL 515 >gi|67676700|ref|ZP_00473446.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chromohalobacter salexigens DSM 3043] Length = 860 Score = 166 bits (422), Expect = 8e-40 Identities = 36/258 (13%), Positives = 79/258 (30%), Gaps = 29/258 (11%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + +I +D + + + + + + + ++ Sbjct: 267 AKEEGRVILFVDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQHIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D P+ E+ ++ E+ V T + A+ R Sbjct: 327 AALERRFQKVLVDEPNEEDTVA--ILRGLKERYEVHHGVDITDGAIIAAAKLSTRYI--- 381 Query: 346 RSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 DR+L DKA A + ++ME +++ L+ + + E + + + DE Sbjct: 382 ------TDRQLPDKAIDLIDEAASRIRMELDSMPEEMDRLDRRLIQLKMEREALKKETDE 435 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTS--KYLKLRLSEAEERRQYLFEELKAQENSQCDFDP 458 A ++ K K + A + + L + E ++ D Sbjct: 436 ATKKRLDSLEAQIESLEREYADLEEVWKAEKASIQGAAQFKAELEQARIDLEAARRQGDL 495 Query: 459 --MKMRMESEIRGLLKGM 474 M I L K + Sbjct: 496 GRMSELQYGVIPKLEKQI 513 >gi|11561808|gb|AAC83689.2| 101 kDa heat shock protein; HSP101 [Triticum aestivum] Length = 918 Score = 166 bits (422), Expect = 8e-40 Identities = 35/250 (14%), Positives = 76/250 (30%), Gaps = 18/250 (7%) Query: 223 GFVKDVFQHCAPNWDFEAL-IKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + + + I +D + + ++ + + Sbjct: 258 EFEERLKAVLKEVEEADGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCIGA 317 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ FQ+ PS+ + ++ E V+ R + Sbjct: 318 TTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTI--SILRGLKEKYEGHHGVRIQDRAIV 375 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 V A+ R A D L D+ACA +++ + +I+ LE + E Sbjct: 376 VAAQLSARYIMGRHLPDKAID--LVDEACANVRVQL--DSQPEEIDNLERKRIQLEVELH 431 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + + D+A + T KY K R+ E + +Q E + Sbjct: 432 ALEKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFTLQ 491 Query: 451 NSQCDFDPMK 460 ++ D + Sbjct: 492 EAERRMDLAR 501 Score = 38.7 bits (89), Expect = 0.32 Identities = 30/212 (14%), Positives = 65/212 (30%), Gaps = 36/212 (16%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFE---ALIKELDFVRKIFRGSE-----------DAR 259 C + L + K V + A F+ + I RG + R Sbjct: 313 RCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEKYEGHHGVRIQDR 372 Query: 260 GKKLFWKADE---LIEKLKSKLIDPLDACNFILMFF---QECDSDS---PSLENGEGGFL 310 + + + L K ID +D + Q + D+ ++ Sbjct: 373 AIVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVELHA 432 Query: 311 IAPQDACN------EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED------ 358 + + E+ + + D K++ + K R K+ + + E+ Sbjct: 433 LEKEKDKASKARLVEVRKELDDLRDKLQPL-TMKYRKEKERIDEIRKLKQRREELQFTLQ 491 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 +A DL K ++E+++ + + E Sbjct: 492 EAERRMDLARVADLKYGALQEIDAAIAKLEGE 523 >gi|73541668|ref|YP_296188.1| AAA ATPase, central region:Clp, N terminal [Ralstonia eutropha JMP134] Length = 862 Score = 166 bits (421), Expect = 1e-39 Identities = 39/257 (15%), Positives = 74/257 (28%), Gaps = 23/257 (8%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDAC 285 D I +D + + + + + + I ++ Sbjct: 266 AKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEYRKYIEKD 325 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D PS+E ++ E+ V+ T + AE R Sbjct: 326 AALERRFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDR 383 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 A D L D A +KME K +++LE + E + + + DEA + Sbjct: 384 FLPDKAID--LID--EAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASLKR 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLR------LSEAEERRQYLFEELKAQENSQCDFDPM 459 + + + EE + E K Q D + Sbjct: 440 LDLIEQEITRLEKEYADLDEIWKAEKGAAQGTAALKEEIEKVKLEIAKLQREG--KLDKV 497 Query: 460 KMRMESEIRGLLKGMEM 476 ++ GL ++ Sbjct: 498 AELQYGKLPGLEGKLKA 514 >gi|68054833|ref|ZP_00538983.1| AAA ATPase, central region:Clp, N terminal:DNA-directed DNA polymerase B [Exiguobacterium sp. 255-15] Length = 857 Score = 166 bits (421), Expect = 1e-39 Identities = 36/268 (13%), Positives = 85/268 (31%), Gaps = 20/268 (7%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + ++ +D + I + ++ + + I Sbjct: 253 EFEERLQAVLNEVKEAEGQILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGA 312 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ P +E+ ++ EI V+ + Sbjct: 313 TTLDEYRKYIEKDPALERRFQQVLVAEPDVEDTI--SILRGLKERFEIHHGVRIHDNALV 370 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D+ACA+ ME +++ L V + E Sbjct: 371 AAAILSDRYITDRFMPDKAID--LVDEACAMIRTDME--SMPAELDSLVRRVMQLEIEEA 426 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-LSEAEERRQYLFEELK-AQE 450 + + DEA R+ +++ + + S+ ++ + E+ K A + Sbjct: 427 ALKKETDEASRKRLETLQQELSSVREDESALRTRWEREKDSSQNVQQLRADLEKAKLALQ 486 Query: 451 NSQCDFDP--MKMRMESEIRGLLKGMEM 476 ++ +D +I L +++ Sbjct: 487 EAEGRYDLNTASEIKYGQIPALENQLKV 514 >gi|68528191|gb|EAN51157.1| AAA ATPase, central region:Clp, N terminal [Ralstonia metallidurans CH34] Length = 862 Score = 166 bits (421), Expect = 1e-39 Identities = 38/257 (14%), Positives = 77/257 (29%), Gaps = 23/257 (8%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDAC 285 D I +D + + + + + + ++ ++ Sbjct: 266 AKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEYRKYIEKD 325 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D PS+E ++ E+ V+ T + AE R Sbjct: 326 AALERRFQKVLVDEPSVEATIA--ILRGLQEKYELHHKVEITDPAIVAAAELSHRYITDR 383 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 A D L D A +KME K +++LE + E + + + DEA R+ Sbjct: 384 FLPDKAID--LID--EAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASRKR 439 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE----NSQCDFDPMK- 460 + + A + L EE++ + Q + K Sbjct: 440 LELIEQEIIRLEKEYADLDEIWRAEKG--AAQGAAALKEEIEKIKLDITRLQREGKLDKV 497 Query: 461 -MRMESEIRGLLKGMEM 476 ++ L ++ Sbjct: 498 AELQYGKLPELEGKLQA 514 >gi|42453220|ref|ZP_00153127.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rickettsia rickettsii] Length = 857 Score = 166 bits (421), Expect = 1e-39 Identities = 35/266 (13%), Positives = 87/266 (32%), Gaps = 20/266 (7%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + + + ++ + + I Sbjct: 255 EFEERLKAVLSEIKESSGEIILFIDELHLLVGTGKTDGVMDASNLLKPMLARGELHCIGA 314 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P++E+ ++ E+ V+ + + Sbjct: 315 TTLDEYRKYIEKDAALARRFQPVYVSEPTVEDTI--SILRGIKEKYELHHAVRISDSAIV 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D+AC + +K+E K +++EL+ + + E Sbjct: 373 AAATLSNRYITDRYLPDKAID--LIDEAC--SRMKIELSSKPEELDELDRRIIQIKIELA 428 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + + DE ++ +K+ K +L + ++ ++ L E Sbjct: 429 ALKKENDEHSKKKIEHLTKALEKLESKSYDMGAKWQAEKSKLQQTQKLKEELDRSRNELE 488 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGM 474 ++ D + K I ++K + Sbjct: 489 RAERDANLAKASELKYGIIPEIMKKI 514 >gi|54035876|sp|Q8YM56|CLPB2_ANASP Chaperone clpB 2 Length = 872 Score = 166 bits (420), Expect = 1e-39 Identities = 37/270 (13%), Positives = 85/270 (31%), Gaps = 22/270 (8%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + + ++ + + + I Sbjct: 256 EFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGA 315 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ E+ V+ + + Sbjct: 316 TTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTI--SILRGLKERYEVHHGVKISDSSLV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A LKME K +++E++ + + E Sbjct: 374 AAATLSSRYISDRFLPDKAID--LVD--EAAARLKMEITSKPEELDEIDRKILQLEMEKL 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYLFEELK 447 Q ++D A RE +++ +L +E + E++ Sbjct: 430 SLQKESDAASRERLERLEKELADLKEEQRTLNTQWQSEKDVINKLQSVKEEIDKVNLEIQ 489 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 E + +++ + L + +E T Sbjct: 490 QAERNYDLNRAAELK-YGNLTDLHRRLEAT 518 Score = 43.7 bits (102), Expect = 0.012 Identities = 36/253 (14%), Positives = 81/253 (32%), Gaps = 32/253 (12%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K + + A F+ + ++ I RG ++ ++ Sbjct: 311 RCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKE------RYEVHHG 364 Query: 271 IEKLKSKLIDPLDA-CNFILMFFQE------CDSDSPSLENGEGGFLIAPQDACNEIAEV 323 ++ S L+ +I F D + L+ + +EI Sbjct: 365 VKISDSSLVAAATLSSRYISDRFLPDKAIDLVDEAAARLKMEITS----KPEELDEIDRK 420 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESI 383 + + + +E +R L+ ++EL D L + Q +K I +L+S+ Sbjct: 421 ILQLEMEKLSLQKESDAA---SRERLERLEKELADLKEEQRTLNTQWQSEKDVINKLQSV 477 Query: 384 VRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER---RQ 440 + E D L+ +A E + ++ + + Sbjct: 478 ----KEEIDKVNLEIQQA--ERNYDLNRAAELKYGNLTDLHRRLEATERELSQTQGTGKS 531 Query: 441 YLFEELKAQENSQ 453 L EE+ + ++ Sbjct: 532 LLREEVTEADIAE 544 >gi|24375079|ref|NP_719122.1| clpB protein [Shewanella oneidensis MR-1] Length = 857 Score = 166 bits (420), Expect = 1e-39 Identities = 36/268 (13%), Positives = 80/268 (29%), Gaps = 20/268 (7%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + +I +D + + + + + Sbjct: 254 EFEERLKAVLNELAQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D PS+E+ ++ E+ V+ T + Sbjct: 314 TTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIA--ILRGLKERYELHHHVEITDPAIV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R + A D L D A + ++M+ K ++ LE + E Sbjct: 372 AAATMSHRYVSDRKLPDKAID--LID--EAASSIRMQMDSKPESLDRLERRAIQLKLEEQ 427 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-QYLFEELKA-QE 450 + DEA R + + + + A + + E+ + E Sbjct: 428 ALAKENDEASRRRLDHLQEELRDVEAKASELSEIWRTEKAALAGTQHIKADLEQARLDLE 487 Query: 451 NSQCDFDP--MKMRMESEIRGLLKGMEM 476 ++ D M I L K +++ Sbjct: 488 VARRAGDLTRMSELQYGRIPELEKQLDL 515 >gi|28378553|ref|NP_785445.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus plantarum WCFS1] Length = 867 Score = 165 bits (419), Expect = 2e-39 Identities = 34/268 (12%), Positives = 87/268 (32%), Gaps = 20/268 (7%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + I + ++ + + LI Sbjct: 256 EFEERLKAVLKEIKKSDGQIIMFIDEIHNIVGAGKTEGSMDAGNLLKPMLARGELHLIGA 315 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ PS+E+ ++ EI V+ + Sbjct: 316 TTLDEYRQYMEKDKALERRFQKVLVAEPSVEDTI--SILRGLKERFEIHHGVRIHDNALV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A+ R A D L D+A A ++++E +++++ + + E Sbjct: 374 AAAKLSDRYITDRYLPDKALD--LVDEASA--EIRVEMNSNPTELDQVNRQLMRLEVEEA 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + + D+A + + ++ K L +++ L + E Sbjct: 430 ALKKETDDASVKRLADVQKELASAKEKQRTLSERWDSEKKSLQALSDKKSALDKAKHDLE 489 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGMEM 476 N++ ++D + I L + ++ Sbjct: 490 NAENNYDLEQAAKLQHGTIPKLEQELKA 517 >gi|68002317|ref|ZP_00534948.1| AAA ATPase, central region:Clp, N terminal [Geobacter metallireducens GS-15] Length = 864 Score = 165 bits (419), Expect = 2e-39 Identities = 36/268 (13%), Positives = 80/268 (29%), Gaps = 22/268 (8%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + +I +D + + + + + Sbjct: 256 EFEERLKAVIKEVAKSEGKVILFIDELHTLVGAGAAEGAMDASNMLKPALARGELHCIGA 315 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ+ + PS+E+ ++ E ++ + Sbjct: 316 TTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIA--ILRGLKEKYETYHGIRIKDSAII 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A + L++E +I+E+E + + E Sbjct: 374 AAATLSDRYITDRFLPDKAID--LID--EAASRLRIEIDSMPTEIDEVERKIIQLEIEKQ 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELK 447 + D E + + + + LSE +++ + E+ K Sbjct: 430 ALLREQDPHALERLQKLTDELNGLQAQAAELKAHWRQEKEIIKGLSELKQQLEERKEQAK 489 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGME 475 E ++R EI + K ME Sbjct: 490 KAEREGNLARTAEIR-YGEIPAIEKEME 516 Score = 42.1 bits (98), Expect = 0.034 Identities = 28/218 (12%), Positives = 65/218 (29%), Gaps = 36/218 (16%) Query: 215 CNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARG----------- 260 C + L + K + + A F+ + ++ I RG ++ Sbjct: 312 CIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLKEKYETYHGIRIKDSA 371 Query: 261 ------------------KKLFWKADELIEKLKSKLIDPLDA-CNFILMFFQECDSDSPS 301 K DE +L+ ++ Q Sbjct: 372 IIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEVERKIIQLEIEKQAL 431 Query: 302 LENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACD--RELEDK 359 L + L Q +E+ +Q A +++ ++ + K + + +E K Sbjct: 432 LREQDPHALERLQKLTDEL-NGLQAQAAELKAHWRQEKEIIKGLSELKQQLEERKEQAKK 490 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 A +L + + +I +E + K+ + + Q + Sbjct: 491 AEREGNLARTAEIRYGEIPAIEKEMEEKKQQLEALQKE 528 >gi|14583098|gb|AAK69758.1| CDPK adapter protein 1 [Mesembryanthemum crystallinum] Length = 479 Score = 165 bits (419), Expect = 2e-39 Identities = 61/295 (20%), Positives = 118/295 (40%), Gaps = 48/295 (16%) Query: 107 HPNISLSQSSLIE------IFLYKRCR--NIACQNLLPAD------DCDCDICSNKKGFC 152 H ++ +S + E + C+ N C +LL + CD+C ++ FC Sbjct: 141 HGSVRISSEEVAEQSPSGPLTGTAVCKAGNRFCSSLLEEEISPSAAAQSCDVCCSEPSFC 200 Query: 153 NLCMCVICSK-FDFASNTCRWIGCD-------VCSHWCHTDCAIREGLIKMGHSAKGASG 204 C C++C D A +I C+ +C H H +CA+R M + G+ G Sbjct: 201 RDCSCILCCNTIDLAYGGYSFIRCEAIVHDDVICGHAAHINCALRS---YMAGTVGGSVG 257 Query: 205 MTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLF 264 + ++C C+ ++L V + + C + + K L+ + RGS+ ++L Sbjct: 258 -LDTEYYCRRCDTRTDLTKHVTKLLKTCESIESRDDIEKMLNVASCLLRGSQKKGSERLL 316 Query: 265 WKADELIEKLK--SKLIDPLDACNFILM---------FFQECDSDSPSLENGEGGFLIAP 313 + ++KLK S L D ++ + + D D +L + Sbjct: 317 NHIESALQKLKGGSDLQDVWKLEVDVMSLPTGQLDYTNYVQVDIDENNLSHQN-----EC 371 Query: 314 QDACNEIAEVVQDTARKME---VVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EI +V+ + R E +A+E++R K S L ++++ + +T Sbjct: 372 LKLEVEIDQVLHELRRSQEVEYRLAQERLRAQKDHLSSL---YQQMDKEKSELTR 423 >gi|54035919|sp|Q9Z6E4|CLPB_STRAL Chaperone clpB Length = 857 Score = 165 bits (419), Expect = 2e-39 Identities = 44/281 (15%), Positives = 80/281 (28%), Gaps = 40/281 (14%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------- 276 D+ A + L V + S+ + ++ + Sbjct: 242 DLGAMVAGAKYRGEFEERLKTVLSEIKESDGQ-IVTFIDELHTVVGAGAADSAMDAGNML 300 Query: 277 ------------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN 318 + + ++ + FQ+ PS+E+ ++ Sbjct: 301 KPMLARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPSVEDSIA--ILRGLKGRY 358 Query: 319 EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIE 378 E VQ + A R A D L D A + L+ME +I+ Sbjct: 359 EAHHKVQIADSALVAAATLSDRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPLEID 414 Query: 379 ELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-- 436 EL+ V + E + D A R+ + + K + S Sbjct: 415 ELQRSVDRLKMEELALDRETDPASRQRLEKLRRDLADRERSCAAHRP-WEKEKQSLNRVG 473 Query: 437 ERRQYLFEELKAQENSQC--DFDPMKMRMESEIRGLLKGME 475 E ++ L E E +Q DFD + EI L + + Sbjct: 474 ELKERLDELRGQAERAQQHGDFDTASKLLYGEIPTLERDLR 514 >gi|74019149|ref|ZP_00689767.1| AAA ATPase, central region:Clp, N terminal [Burkholderia ambifaria AMMD] Length = 865 Score = 165 bits (419), Expect = 2e-39 Identities = 35/254 (13%), Positives = 78/254 (30%), Gaps = 19/254 (7%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDAC 285 D I +D + + + + + + I ++ Sbjct: 267 AKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYRKYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D PS+E ++ E+ V T + AE R Sbjct: 327 AALERRFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 A D L D A + +KME K ++++L+ + + E + + + DEA ++ Sbjct: 385 FLPDKAID--LID--EAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKR 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEELKAQ-ENSQCDFDPMK--M 461 + + + + + E+++A Q + K Sbjct: 441 LQLIEEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLEKVAE 500 Query: 462 RMESEIRGLLKGME 475 ++ L ++ Sbjct: 501 LQYGKLPQLESQLK 514 >gi|885934|gb|AAB09631.1| ClpB Length = 883 Score = 165 bits (419), Expect = 2e-39 Identities = 34/267 (12%), Positives = 87/267 (32%), Gaps = 20/267 (7%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + D +I +D + + ++ + + Sbjct: 265 EFEERLTAVLKEVTDSEGIIILFIDEMHTVVGAGAVQGSMDAGNLLKTMLARGELRCIGA 324 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 K ++ + FQ+ D P++E+ ++ E+ V+ + + Sbjct: 325 TTLGKYRQYIEKDAALERRFQQVFVDQPTVEDTI--SILRGLKERYEVHHGVRISDNALV 382 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D++ LKME K +++E++ + + E Sbjct: 383 AAAVLSTRYISDRFLPDKAID--LVDES--AARLKMEITSKPEELDEIDRKILQLEMERL 438 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEELKAQ-E 450 Q ++D A +E +S++ + + + + +++ + Sbjct: 439 SLQKESDLASQERLQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSVKEEIDQVNLLIQ 498 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGME 475 ++ D+D K ++ L + + Sbjct: 499 QAERDYDLNKAAELKYGKLTELQRKLN 525 Score = 39.8 bits (92), Expect = 0.15 Identities = 27/199 (13%), Positives = 64/199 (32%), Gaps = 35/199 (17%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + + + + A F+ + ++ I RG ++ ++ Sbjct: 320 RCIGATTLGKYRQYIEKDAALERRFQQVFVDQPTVEDTISILRGLKE------RYEVHHG 373 Query: 271 IEKLKSKLIDPLDAC-NFILMFFQE------CDSDSPSLENGEGGFLIAPQDACNEIAEV 323 + + L+ +I F D + L+ + +EI Sbjct: 374 VRISDNALVAAAVLSTRYISDRFLPDKAIDLVDESAARLKMEITS----KPEELDEIDRK 429 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME----------RQKK 373 + + + +E ++ L ++EL D L + Q Sbjct: 430 ILQLEMERLSLQKESDLASQER---LQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSV 486 Query: 374 KPQIEELESIVRLKQAEAD 392 K +I+++ + ++QAE D Sbjct: 487 KEEIDQVN--LLIQQAERD 503 >gi|51473305|ref|YP_067062.1| ATP-binding ClpB chaperone [Rickettsia typhi str. Wilmington] Length = 858 Score = 165 bits (419), Expect = 2e-39 Identities = 34/251 (13%), Positives = 85/251 (33%), Gaps = 19/251 (7%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + + + ++ + + I ++ + Sbjct: 272 GEIILFIDELHLLVGTGKVEGAMDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALA 331 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ PS+E+ ++ E+ V+ + + A R Sbjct: 332 RRFQPVYVGEPSVEDTI--SILRGIKEKYELHHAVRISDSAIVAAATLSNRYITDRYLPD 389 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D+AC + +K+E K +++EL+ + + E + + DE ++ Sbjct: 390 KAID--LIDEAC--SRMKIELSSKPEELDELDRRIIQIKIELAALKKENDEHSKKKITSL 445 Query: 410 XXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM--RMES 465 +K+ K +L +A++ ++ L + + ++ D + K Sbjct: 446 TEELKQLDSKSYDMNTKWQAAKSKLQQAQKLKEELEQARIDLDRAERDANLAKASELKYG 505 Query: 466 EIRGLLKGMEM 476 I ++ ++ Sbjct: 506 IIPEIMNKLQA 516 >gi|58417961|emb|CAI27165.1| ClpB protein [Ehrlichia ruminantium str. Welgevonden] Length = 863 Score = 165 bits (418), Expect = 2e-39 Identities = 35/267 (13%), Positives = 82/267 (30%), Gaps = 20/267 (7%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++I +D + + + + + I Sbjct: 260 EFEERLKAVVNEIVSSNGSIILFIDELHTLVGAGATDGAMDASNLLKPALARGEIHCIGA 319 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P+ ++ ++ E + R + Sbjct: 320 TTLDEYRKHIEKDVALARRFQTIFISEPTCDDTI--SMLRGLKERYEGHHGIDIPDRSII 377 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R A D L D A + +ME K I++L+ + + E Sbjct: 378 AAVALSQRYITDRYLPDKAID--LID--EAASRARMEIDSKPEVIDKLDRKIMQLKIEIG 433 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + + ++DE+ ++ +SK+ K+++S+ + ++ L E Sbjct: 434 VLEKESDESSKQRLMKLKDELEKLNVQSAELSSKWQAEKMKMSKMKACKEKLDIARSDLE 493 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGME 475 +Q D K M I + K ++ Sbjct: 494 RAQRSGDLAKAGELMYGVIPEIEKELK 520 >gi|3360502|gb|AAC62621.1| heat shock protein [Plectonema boryanum] Length = 883 Score = 165 bits (418), Expect = 3e-39 Identities = 38/270 (14%), Positives = 85/270 (31%), Gaps = 22/270 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D +I +D + + ++ + + + I Sbjct: 267 EFEERLKAVLKEVTDSRGNIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGA 326 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ E+ V+ + + Sbjct: 327 TTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTI--SILRGLKERYEVHHGVKISDSALV 384 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A LKME K +++E++ V + E Sbjct: 385 AAATLSTRYISDRFLPSKAID--LVD--EAAAKLKMEITSKPEELDEVDRKVLQLEMERL 440 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELK 447 Q + D R+ +++ + L + +E + E++ Sbjct: 441 SLQKENDAGSRDRLERLERELADFKEDQSKLNAQWQAEKSVITDLQKLKEEIDRVNLEIQ 500 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 E +++ ++ L + +E T Sbjct: 501 QAERDYDLNRAAELK-YGKLNELNRKVEET 529 Score = 46.8 bits (110), Expect = 0.001 Identities = 41/268 (15%), Positives = 94/268 (35%), Gaps = 38/268 (14%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K + + A F+ + ++ I RG ++ ++ Sbjct: 322 RCIGATTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTISILRGLKE------RYEVHHG 375 Query: 271 IEKLKSKLIDPLDAC-NFILMFFQE----CDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 ++ S L+ +I F D + + + + + +E+ V Sbjct: 376 VKISDSALVAAATLSTRYISDRFLPSKAIDLVDEAAAKLK--MEITSKPEELDEVDRKVL 433 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 +ME ++ +K +R L+ +REL D + L + Q +K I +L+ Sbjct: 434 QL--EMERLSLQKENDA-GSRDRLERLERELADFKEDQSKLNAQWQAEKSVITDLQK--- 487 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 + E D L+ +A R+ + ++ +L+E + + + Sbjct: 488 -LKEEIDRVNLEIQQAERDYDLNR--------------AAELKYGKLNELNRKVEETESQ 532 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKG 473 L + S + +ES+I ++ Sbjct: 533 LSQIQKSGATL-LREEVLESDIAEIISK 559 >gi|52698325|ref|ZP_00339733.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rickettsia akari str. Hartford] Length = 858 Score = 165 bits (418), Expect = 3e-39 Identities = 37/266 (13%), Positives = 89/266 (33%), Gaps = 20/266 (7%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + D +I +D + + + ++ + + I Sbjct: 255 EFEERLKAVLSEIKDSSGEIILFIDELHLLVGTGKTDGAMDASNLLKPMLARGELHCIGA 314 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P++E+ ++ E+ V+ + + Sbjct: 315 TTLDEYRKYIEKDAALARRFQPVYVSEPTVEDTI--SILRGIKEKYELHHAVRISDSAIV 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D+AC + +K+E K +++EL+ + + E Sbjct: 373 SAATLSNRYITDRYLPDKAID--LIDEAC--SRMKIELSSKPEELDELDRRIIQIKIELA 428 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + + DE ++ +K+ K +L +A++ ++ L E Sbjct: 429 ALKKENDEHSKKKITHLTEELEKLESKSYDMNAKWHAEKSKLQQAQKLKEELERARINLE 488 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGM 474 ++ D + K I ++K + Sbjct: 489 RAERDSNLAKASELKYGIIPEIMKKI 514 >gi|70732609|ref|YP_262372.1| ClpB protein PA4542 [Pseudomonas fluorescens Pf-5] Length = 854 Score = 165 bits (418), Expect = 3e-39 Identities = 35/255 (13%), Positives = 81/255 (31%), Gaps = 19/255 (7%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDAC 285 + +I +D + + + + + + ++ ++ Sbjct: 267 SKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D PS E+ ++ E+ V T + A+ R Sbjct: 327 AALERRFQKVLVDEPSEEDTIA--ILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDR 384 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 + A D L D A + ++ME K ++ LE + + E+ + + DEA + Sbjct: 385 QLPDKAID--LID--EAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKR 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDP--MKM 461 + K + + + +Q + + + E ++ D M Sbjct: 441 LEKLQEEIVRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAE 500 Query: 462 RMESEIRGLLKGMEM 476 I L + ++M Sbjct: 501 LQYGVIPDLERSLQM 515 >gi|71675495|ref|ZP_00673240.1| AAA ATPase, central region:Clp, N terminal [Trichodesmium erythraeum IMS101] Length = 870 Score = 165 bits (417), Expect = 3e-39 Identities = 37/268 (13%), Positives = 85/268 (31%), Gaps = 22/268 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D +I +D + + ++ + + + I Sbjct: 256 EFEERLKAVLKEVTDSEGKIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGA 315 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ E+ V+ + + Sbjct: 316 TTLDEYRKYIEKDAALERRFQQVYVDQPSVED--AISILRGLKERYEVHHGVKISDSSLV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A LKME K +++E++ + + E Sbjct: 374 AAATLSTRYISDRFLPDKAID--LVD--EAAAKLKMEITSKPEELDEIDRKILQLEMEKL 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELK 447 Q ++D A +E +++ + + +E + E++ Sbjct: 430 SLQKESDTASKERLGRLEKDLANLKEGQRALNAQWESEKGIISTIQTVKEEIDKVNIEIQ 489 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGME 475 E + +++ + L K +E Sbjct: 490 QAERNYDLNRAAELK-YGRLINLQKQVE 516 >gi|22295113|dbj|BAC08941.1| ClpB protein [Thermosynechococcus elongatus BP-1] Length = 871 Score = 165 bits (417), Expect = 3e-39 Identities = 38/267 (14%), Positives = 84/267 (31%), Gaps = 22/267 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D +I +D + + ++ + + + I Sbjct: 255 EFEERLKAVLKEVTDSNGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGA 314 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ EI V+ + + Sbjct: 315 TTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTI--SILRGLKERYEIHHGVKISDTALV 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A LKME K +++E++ + + E Sbjct: 373 AAATLSARYISDRFLPDKAID--LVD--EAAAKLKMEITSKPEELDEIDRKILQLEMERL 428 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYLFEELK 447 Q + A R+ +++ RL +E + + E++ Sbjct: 429 SLQKETSAASRDRLEKLERELADLKEEQSRLNAQWQAEKEVIDRLQSIKEEIEKVNIEIQ 488 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGM 474 E + +++ ++ L K + Sbjct: 489 QAERNYDLNRAAELK-YGKLTELHKKL 514 Score = 51.4 bits (122), Expect = 5e-05 Identities = 42/273 (15%), Positives = 86/273 (31%), Gaps = 48/273 (17%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K + + A F+ + ++ I RG ++ ++ Sbjct: 310 RCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTISILRGLKE------RYEIHHG 363 Query: 271 IEKLKSKLIDPLDA-CNFILMFFQE----CDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 ++ + L+ +I F D + + + + + +EI + Sbjct: 364 VKISDTALVAAATLSARYISDRFLPDKAIDLVDEAAAKLK--MEITSKPEELDEIDR--K 419 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 +ME ++ + +R L+ +REL D + L + Q +K I+ L+SI Sbjct: 420 ILQLEMERLS-LQKETSAASRDRLEKLERELADLKEEQSRLNAQWQAEKEVIDRLQSIKE 478 Query: 386 LKQ---AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL 442 + E + D R KY KL E + L Sbjct: 479 EIEKVNIEIQQAERNYDLNR-------------------AAELKYGKLT-----ELHKKL 514 Query: 443 FEELKAQENSQCDFDPMK--MRMESEIRGLLKG 473 E Q + E++I ++ Sbjct: 515 AEAEAKLREIQVGGRSLLRDEVTEADIAEIISK 547 >gi|28210275|ref|NP_781219.1| clpB protein [Clostridium tetani E88] Length = 865 Score = 164 bits (416), Expect = 4e-39 Identities = 38/267 (14%), Positives = 84/267 (31%), Gaps = 20/267 (7%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + I + ++ + + I Sbjct: 258 EFEERLKAVLKEVENSQGKIILFIDEIHNIVGAGKTEGSMDAGNLIKPMLARGELNCIGA 317 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D P++E+ +I EI ++ + Sbjct: 318 TTFDEYRKYIEKDKALERRFQPVIIDEPTVEDTI--SIIRGLKERFEIHHGIRIHDSAIV 375 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A+ R A D L D+A A+ ++ E +++ ++ + + E + Sbjct: 376 AAAKLSQRYITDRYLPDKAID--LIDEAGAM--IRTEIDSLPTELDSIKRKIFQMEIEKE 431 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER-RQYLFEELK-AQE 450 + D +E T+KY K + R + +E+K E Sbjct: 432 ALAKEKDSRSKERLEDLEKELSNLKEKDKEMTAKYEKEKEQIINMRNLKQKLDEVKGQLE 491 Query: 451 NSQCDFDPMK--MRMESEIRGLLKGME 475 ++ ++D K I G+ +E Sbjct: 492 KAEREYDLNKVAELKYGIIPGIKSQIE 518 >gi|48783814|ref|ZP_00280195.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Burkholderia fungorum LB400] Length = 865 Score = 164 bits (416), Expect = 5e-39 Identities = 34/258 (13%), Positives = 79/258 (30%), Gaps = 22/258 (8%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 D I +D + + + + + + + ++ Sbjct: 267 AKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYRKYIEKD 326 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D P++E ++ E+ V T + AE R Sbjct: 327 AALERRFQKVLVDEPTVEATIA--ILRGLQEKYELHHGVDITDPAIVAAAELSHRYITDR 384 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 A D L D A + +KME K +++ L+ + + E + + + DEA ++ Sbjct: 385 FLPDKAID--LID--EAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKR 440 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELKAQENSQCDFDPMK 460 + + ++ +E + E+ + + + Sbjct: 441 LQLIEEEIERLNREYSDLDEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREG-KLEKVA 499 Query: 461 MRMESEIRGLLKGM-EMT 477 ++ GL + E+T Sbjct: 500 ELQYGKLPGLEAQLKEVT 517 >gi|46580283|ref|YP_011091.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] Length = 865 Score = 164 bits (416), Expect = 5e-39 Identities = 32/268 (11%), Positives = 79/268 (29%), Gaps = 22/268 (8%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + I + ++ + + I Sbjct: 259 EFEERLKAVLKEVEKSEGRIIMFIDELHTIVGAGKTDGAMDASNLLKPMLARGELHCIGA 318 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D P++E+ ++ E+ V+ + + Sbjct: 319 TTLDEYRKYIEKDPALERRFQPVLVDEPTIED--AISILRGLKERFEVHHGVRISDSAIV 376 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A D L D A ++ E ++E + + E + Sbjct: 377 EAVTLSHRYITDRQLPDKAID--LID--EAAALIRTEIDSLPADLDEANRKIMQLEIERE 432 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE-----AEERRQYLFEELK 447 + + D A RE S++ + + S +E + ++ Sbjct: 433 ALRRETDVASRERLERLENELADLRAEQTALLSQWEREKGSIDHVRSIKEDIERTRHAIE 492 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGME 475 E + +++ S + L + +E Sbjct: 493 EAERAYDLNRAAELK-YSRLLELERQLE 519 >gi|68195152|gb|EAN09610.1| AAA ATPase, central region:Clp, N terminal [Enterococcus faecium DO] Length = 869 Score = 164 bits (415), Expect = 5e-39 Identities = 30/267 (11%), Positives = 84/267 (31%), Gaps = 20/267 (7%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + ++ +D + I + ++ + + LI Sbjct: 256 EFEERLKAVLKEVKKSDGRILLFIDEIHNIVGAGKTEGSMDAGNLLKPMLARGELHLIGA 315 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ P++E+ ++ EI V + Sbjct: 316 TTLDEYRQYMEKDKALERRFQKVLVKEPTVEDTI--SILRGLKERFEIHHGVNIHDNALV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D+A A +++E +++++ + + E Sbjct: 374 AAATLSDRYITDRFLPDKAID--LIDEASA--TIRVEMNSMPTELDQVTRRLMQLEIEEA 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER-RQYLFEELK-AQE 450 + ++D+A ++ ++ + ++ ++ K E Sbjct: 430 ALKKESDDASKKRLKNLQEELAELREEANAMKMQWETEKEEVNSVSAKRAEIDKAKHELE 489 Query: 451 NSQCDFDPMKM--RMESEIRGLLKGME 475 +++ ++D + I L K ++ Sbjct: 490 DAENNYDLERAAVLRHGTIPQLEKELK 516 >gi|15828345|ref|NP_302608.1| heat shock protein [Mycobacterium leprae TN] Length = 848 Score = 164 bits (415), Expect = 5e-39 Identities = 44/252 (17%), Positives = 86/252 (34%), Gaps = 20/252 (7%) Query: 239 EALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFI 288 +I +D + I G+ ++ + + +L+ ++ + Sbjct: 271 GQIITFIDELHTIVGAGATGESAMDAGNMIKPMLARGELRLVGATTLDEYRRYIEKDAAL 330 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ+ PS+E+ G ++ E+ V+ T + A R Sbjct: 331 ERRFQQIFVGEPSVEDTVG--ILRGLKDRYEVHHGVRITDSALVAAAALSDRYITARFLP 388 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXX 408 A D L D A + L+ME + +I+E+E +VR + E + DEA +E Sbjct: 389 DKAID--LVD--EAASRLRMEIDSRPVEIDEVERLVRRFEIEEMALVNEEDEASKERLET 444 Query: 409 XXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQENSQCDFDPMKM--RME 464 T+++ + + E ++ L E ++ D D K Sbjct: 445 LRAELADQKERLAELTARWQNEKNAIDVVRELKEQLETLRGESERAERDGDLAKAAELRY 504 Query: 465 SEIRGLLKGMEM 476 I + K +E Sbjct: 505 GRIPEVEKKLEA 516 >gi|31872394|gb|AAP59445.1| ClpB-like protein [Meiothermus ruber] Length = 854 Score = 163 bits (414), Expect = 7e-39 Identities = 36/266 (13%), Positives = 77/266 (28%), Gaps = 19/266 (7%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + LI Sbjct: 246 EFEERLKAVIQETVQSAGQIILFIDEIHTVVGAGKAEGAVDAGNMLKPALARGELHLIGA 305 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D PSLE ++ E+ V+ + + Sbjct: 306 TTLDEYREIEKDPALERRFQPVFVDEPSLEETV--SILRGIKEKYEVHHGVRISDPALIA 363 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R + A D L D A L+M + I+ L + E + Sbjct: 364 AAQLSHRYIADRKLPDKAID--LVD--EAAARLRMALESSPESIDALNRRKLQLEIEREA 419 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQEN 451 + + D + +++ R + + +Q L E E Sbjct: 420 LKKETDAESKFRLGELEKEIADLEEEIRKQQAEWEAEREIMQKLRAAQQRLDEVRTQIEQ 479 Query: 452 SQCDFDPMKM--RMESEIRGLLKGME 475 ++ +D K E+ L + + Sbjct: 480 AERAYDLNKAAPLRYGELPKLEQEVN 505 >gi|71281252|ref|YP_270571.1| ATP-dependent chaperone protein ClpB [Colwellia psychrerythraea 34H] Length = 861 Score = 163 bits (414), Expect = 8e-39 Identities = 33/274 (12%), Positives = 83/274 (30%), Gaps = 32/274 (11%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + + +I +D + + + + + Sbjct: 254 EFEERLKAVLNELSKEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGA 313 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ + PS+E+ ++ E+ V T + Sbjct: 314 TTLDEYRKYIEKDAALERRFQKVLVEEPSVEDTIA--ILRGLKERYELHHSVNITDPAIV 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR+L DKA A + ++++ K ++ LE + Sbjct: 372 AAATLSHRYI---------SDRQLPDKAIDLIDEAASSIRLQMDSKPEDLDRLERRLIQL 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE-----AEERRQYL 442 + E + DEA + + + + +E + Sbjct: 423 KLEQRALEKDEDEATIKRLAIISQQISEKQKKYDELDEVWTTEKAALYGAHTIKEELEQA 482 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 EL+A + +++ ++ L K +++ Sbjct: 483 RIELEAARRTGDLNRMSELQ-YGKLPELEKQLDL 515 >gi|67517989|ref|XP_658767.1| hypothetical protein AN1163.2 [Aspergillus nidulans FGSC A4] Length = 800 Score = 163 bits (413), Expect = 9e-39 Identities = 40/270 (14%), Positives = 82/270 (30%), Gaps = 24/270 (8%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 + +K V + +I +D + + + + + + + Sbjct: 178 DFEERLKSVLKEVEEAQ--GGVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGELQCC 235 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + FQ PS+ ++ E+ V+ T + Sbjct: 236 GATTLNEYRLIEKDVALARRFQPIQVGEPSVAATI--SILRGIKDKYEVHHGVRITDGAL 293 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 A R A D L D A + L+++++ K I EL+ + Q E Sbjct: 294 VAAATYSNRYITDRFLPDKAID--LVD--EAASALRLQQESKPDIIRELDRDITTIQIEL 349 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK---- 447 + + + D + RE T + K + +R EEL+ Sbjct: 350 ESLRKETDISSRERREKLEEDLKAKREESRKLTEIWEKEKAEIESLKRTK--EELERTRF 407 Query: 448 AQENSQCDFDPMKM--RMESEIRGLLKGME 475 E +Q + + K S+I L + Sbjct: 408 ELEQAQREGNFAKAGELRYSKIPSLEAKLP 437 >gi|39944910|ref|XP_361992.1| hypothetical protein MG04437.4 [Magnaporthe grisea 70-15] Length = 786 Score = 163 bits (413), Expect = 9e-39 Identities = 37/271 (13%), Positives = 80/271 (29%), Gaps = 31/271 (11%) Query: 224 FVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + + + + + + + Sbjct: 167 FEERLKKVLTEVEQANGQVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGAT 226 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ + P++E+ ++ E+ V+ T + Sbjct: 227 TLNEYRLIEKDVALARRFQPILVNEPTVEDTI--SILRGIKDKYEVHHGVRITDGALVAA 284 Query: 335 AEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQA 389 A R DR L DKA A + L+++++ K I L+ + Q Sbjct: 285 AAYSNRYI---------TDRFLPDKAIDLMDEAASSLRLQQESKPEDIMRLDQKIMTIQI 335 Query: 390 EADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-----EAEERRQYLFE 444 E + + + D A RE K+ K R + + Sbjct: 336 ELESLRKEKDVASRERREKLESDLKKLQDEVKELNDKWDKERSEIDAIKQTQAELDRARI 395 Query: 445 ELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 EL+ + ++R I L + Sbjct: 396 ELEVAQREGNFGRASELR-FGVIPSLEAKLP 425 >gi|70726976|ref|YP_253890.1| hypothetical protein SH1975 [Staphylococcus haemolyticus JCSC1435] Length = 869 Score = 163 bits (413), Expect = 1e-38 Identities = 37/263 (14%), Positives = 88/263 (33%), Gaps = 21/263 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + + +I +D + + + ++ + + Sbjct: 253 EFEERLKAVLKEVKES--DGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGELHCI 310 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + ++ + + FQ+ P +E+ ++ E+ V+ R Sbjct: 311 GATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTI--SILRGLKERYEVYHGVRIQDRA 368 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + AE R A D L D+ACA ++ E +++++ V + E Sbjct: 369 LVAAAELSDRYITDRFLPDKAID--LVDQACA--TIRTEMGSNPTELDQVNRRVMQLEIE 424 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + ++D A + S+ K +++ +E+R L +A Sbjct: 425 ESALKNESDNASKHRLEELQEELSNEKEKQASLQSRVEQEKEKIANVQEKRAELDRSRQA 484 Query: 449 QENSQCDFDPMKM--RMESEIRG 469 E++Q + + K I Sbjct: 485 LEDAQTEGNLEKAAELQYGTIPQ 507 >gi|66805423|ref|XP_636444.1| hypothetical protein DDB0188234 [Dictyostelium discoideum] Length = 795 Score = 163 bits (412), Expect = 1e-38 Identities = 33/251 (13%), Positives = 75/251 (29%), Gaps = 19/251 (7%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFI 288 +I +D + + G + + ++ ++ + Sbjct: 205 KGEVILFIDELHTLVGAGAVEGGMDASNMLKPQLARGDLHCVGATTTAEYRKYIEKDPAL 264 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ PS+E+ ++ E+ V+ T + R Sbjct: 265 ARRFQSVLVQEPSVEDSIA--ILRGLKERYEVHHGVRITDSALVAAVVNSQRYITDRFLP 322 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXX 408 A D L D A + L+++++ +IE L + + + E + + + D+ +E Sbjct: 323 DKAID--LID--EAASRLRLQQESLPEEIENLNRQIIVSKIELEALKKEKDQVSKERREK 378 Query: 409 XXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFEELKAQENSQCDFDPMKM--RME 464 T + K + + + + L + +Q D + Sbjct: 379 LEKELKEKDKQYNKLTEVWKKEKEQLSIRKTAVEKLDRAKIELQQAQRKGDLARAGELAY 438 Query: 465 SEIRGLLKGME 475 S I L K + Sbjct: 439 SIIPQLEKQIP 449 >gi|6013196|gb|AAF01280.1| heat shock protein 101 [Triticum aestivum] Length = 913 Score = 163 bits (412), Expect = 1e-38 Identities = 35/252 (13%), Positives = 75/252 (29%), Gaps = 19/252 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + +I +D + + ++ + + Sbjct: 257 EFEERLKAVLKEVEEAE--GKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCI 314 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ FQ+ PS+ + ++ E V+ R Sbjct: 315 GATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTV--SILRGLKEKYEGHHGVRIQDRA 372 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + + A+ R A D L D+ACA +++ + +I+ LE + E Sbjct: 373 LVIAAQLSSRYIMGRHLPDKAID--LVDEACANVRVQL--DSQPEEIDNLERKRIQLEVE 428 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + + D+A + KY K R+ E +Q E Sbjct: 429 LHALEKEKDKASKARLVDVRKELDDLRDKLQPLQMKYRKEKERIDEIRSLKQRREELQFT 488 Query: 449 QENSQCDFDPMK 460 + ++ D + Sbjct: 489 LQEAERRMDLAR 500 Score = 38.7 bits (89), Expect = 0.39 Identities = 29/190 (15%), Positives = 73/190 (38%), Gaps = 12/190 (6%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFE---ALIKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K V + A F+ + I RG ++ + Sbjct: 312 RCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTVSILRGLKEKYEGH-----HGV 366 Query: 271 IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ +I + +I+ + L + + D+ E + ++ + Sbjct: 367 RIQDRALVIAAQLSSRYIMGRHLPDKAI--DLVDEACANVRVQLDSQPEEIDNLERKRIQ 424 Query: 331 MEVVA-EEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQA 389 +EV + K +++ L +EL+D + L+M+ +K+K +I+E+ ++ ++ Sbjct: 425 LEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPLQMKYRKEKERIDEI-RSLKQRRE 483 Query: 390 EADMFQLKAD 399 E +A+ Sbjct: 484 ELQFTLQEAE 493 >gi|50918667|ref|XP_469730.1| unknown protein [Oryza sativa (japonica cultivar-group)] Length = 378 Score = 163 bits (412), Expect = 1e-38 Identities = 60/284 (21%), Positives = 103/284 (36%), Gaps = 43/284 (15%) Query: 139 DCDCDICSNKKGFCNLCMCVICSKF-DFASNTCRWIGCD-------VCSHWCHTDCAIRE 190 DCD+C FC C CV C + D++ +I C+ +C H H DCA+R Sbjct: 45 AQDCDLCCKMPDFCRECCCVFCRRVVDYSFGGYSYIKCEAVLEENKICGHIGHLDCALRT 104 Query: 191 GLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRK 250 M + G +M + C C++ + L V+ + C + + L+ Sbjct: 105 ---FMAGTVGGCID-LDMQYCCRRCDNKTNLMLHVEKFLEICQSLQSRDDIEPILNTGLC 160 Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLI--------------------DPLDACNFILM 290 + RGS R K L + KLK + P +L Sbjct: 161 LVRGSRQTRAKSLESIMRSAMAKLKCGVDLAEVWKMEDNGINSTPSAEVSPATGGVTVLG 220 Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 Q + D+P GF A N++ V++ + E++ + + +D Sbjct: 221 IQQAPEEDAP------PGFPYYVDLADNDLQRAVENLPA---YITEDQHTLSVRFEDSID 271 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 +EL K + K+ QK Q + + S+ R +E + Sbjct: 272 HALKEL--KRSQEAEYKLAEQKLYSQKDHVLSLYRQLDSERSVL 313 >gi|22957954|ref|ZP_00005638.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rhodobacter sphaeroides 2.4.1] Length = 870 Score = 163 bits (412), Expect = 1e-38 Identities = 34/250 (13%), Positives = 80/250 (32%), Gaps = 19/250 (7%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + + + + + + I ++ + Sbjct: 270 GEIILFIDEMHTLVGAGKSEGAMDAANLIKPALARGELHCIGATTLDEYRKHVEKDAALA 329 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ + P++E+ ++ E+ V+ + A R Sbjct: 330 RRFQPLMVEEPTVEDTI--SILRGIKEKYELHHGVKIADAALVAAATLSHRYITDRFLPD 387 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A + L+ME K +++ L+ + Q EA+ + + D A ++ Sbjct: 388 KAID--LVD--EAASRLRMEVDSKPEELDALDRQILQAQIEAEALKKEDDAASKDRLAKL 443 Query: 410 XXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM--RMES 465 T+++ + +L A + ++ L E + + + + Sbjct: 444 EKELSGMTERAAEMTAQWQAERDKLEAARDLKEQLDRARAELEQVKREGNLARAGELSYG 503 Query: 466 EIRGLLKGME 475 I + K +E Sbjct: 504 VIPQIEKKLE 513 >gi|34497399|ref|NP_901614.1| ATP-dependent Clp protease subunit; heat-shock protein [Chromobacterium violaceum ATCC 12472] Length = 859 Score = 162 bits (411), Expect = 1e-38 Identities = 31/246 (12%), Positives = 76/246 (30%), Gaps = 21/246 (8%) Query: 244 ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFILMFFQE 294 +D + + + + + + I ++ + FQ+ Sbjct: 276 FIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQK 335 Query: 295 CDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDR 354 PS+E+ ++ EI V T + AE R A D Sbjct: 336 VLVGEPSVEDTIA--ILRGLQEKYEIHHGVDITDPAIVAAAELSQRYITDRFLPDKAID- 392 Query: 355 ELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXX 414 L D A + +KME K +++L+ + + E + ++DEA ++ Sbjct: 393 -LID--EAASRIKMELDSKPEAMDKLDRRLIQLKIEREAVNKESDEASQKRLKLIEDEIA 449 Query: 415 XXXXXXXXYTSKYLKLRLSEA-----EERRQYLFEELKAQENSQCDFDPMKMRMESEIRG 469 + + ++ +E L +++ + +++ ++ Sbjct: 450 ELSREYADLEEIWKAEKAAQQGSQSIKEEIDRLKVDMEELKRKGDWQKLAELQ-YGKLPQ 508 Query: 470 LLKGME 475 L ++ Sbjct: 509 LEARLK 514 >gi|22535406|emb|CAC87117.1| heat shock protein 101 [Oryza sativa (japonica cultivar-group)] Length = 912 Score = 162 bits (411), Expect = 2e-38 Identities = 34/252 (13%), Positives = 75/252 (29%), Gaps = 19/252 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + +I +D + + ++ + + Sbjct: 257 EFEERLKAVLKEVEEAE--GKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCI 314 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ FQ+ PS+ + ++ E V+ R Sbjct: 315 GATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTI--SILRGLKEKYEGHHGVRIQDRA 372 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + V A+ R A D L A +++++ + +I+ LE + E Sbjct: 373 LVVAAQLSARYIMGRHLPDKAID--LV--GEARANVRVQLDSQPEEIDNLERKRIQLEVE 428 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + + D+A + T KY K R+ E + +Q E Sbjct: 429 HHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQRREELQFT 488 Query: 449 QENSQCDFDPMK 460 + ++ D + Sbjct: 489 LQEAERRMDLAR 500 >gi|33519653|ref|NP_878485.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone system with DnaK, DnaJ, and GrpE [Candidatus Blochmannia floridanus] Length = 872 Score = 162 bits (411), Expect = 2e-38 Identities = 36/270 (13%), Positives = 82/270 (30%), Gaps = 29/270 (10%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + I +D + + + + + + + Sbjct: 257 EFEERFKKVLYAVSKDNNTILFIDELHVMVGAGKTDGSMDASNMIKPKLARGELHCVGAT 316 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ+ P++EN ++ E+ V T + Sbjct: 317 TLDEYSRYIEKDAALERRFQKIFIIEPNIENTIA--ILRGLKERYELHHNVHITDPAIVA 374 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQ 388 A R DR+L DKA A + ++++ K ++ L+ + + Sbjct: 375 AATLSNRYI---------SDRQLPDKAIDLIDEAASSIRIQIDSKPEDLDRLDRRIIQLK 425 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL-FEELK 447 E + ++DE ++ S++ + R S + + E+ K Sbjct: 426 LECQALKKESDELSKKRLEILSMELSQKEQEYSVLESEWKRERSSLFDIQNIKSDLEKAK 485 Query: 448 -AQENSQCDFDPMKM--RMESEIRGLLKGM 474 + S+ D +M I L K + Sbjct: 486 TILDQSRRIGDLAQMSELQYGRIPELEKKL 515 >gi|73663109|ref|YP_301890.1| putative ATPase subunit of an ATP-dependent protease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 869 Score = 162 bits (410), Expect = 2e-38 Identities = 36/260 (13%), Positives = 93/260 (35%), Gaps = 20/260 (7%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + D + +I +D + + + ++ + + Sbjct: 253 EFEERLKAVLKEVKDSDGRIILFIDEIHILVGAGKTEGAMDAGNMLKPMLARGELHCIGA 312 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + ++ + + FQ+ + P +E+ ++ E+ V+ + + Sbjct: 313 TTLNEYREYIEKDSALERRFQKVNVSEPDVEDTI--SILRGLKERYEVYHGVRIQDKALV 370 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D+ACA ++ E +++++ V + E Sbjct: 371 AAAELSDRYITDRFLPDKAID--LVDQACA--TIRTEMGSNPTELDQVNRRVMQLEIEES 426 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSK--YLKLRLSEAEERRQYLFEELKAQE 450 + ++D A ++ S+ K ++++ +E+R L E KA E Sbjct: 427 ALKNESDNASKQRLQELQQELSNEKEKQNAIQSRVEEEKGKIAKLQEKRTELDESRKALE 486 Query: 451 NSQCDFDPMKM--RMESEIR 468 +++ +++ K +I Sbjct: 487 DAENNYNLEKAAELQHGKIP 506 >gi|54027376|ref|YP_121618.1| putative Clp protease ATP-binding subunit [Nocardia farcinica IFM 10152] Length = 853 Score = 161 bits (409), Expect = 2e-38 Identities = 42/281 (14%), Positives = 84/281 (29%), Gaps = 40/281 (14%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK----------- 275 D+ A + L V + + S + ++ Sbjct: 241 DLGAMVAGAKYRGEFEERLKAVLEDIKNSAGQ-IITFIDELHTIVGAGATGESAMDAGNM 299 Query: 276 ------------------SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 + ++ + FQ+ PS+E+ G ++ Sbjct: 300 IKPMLARGELRLVGATTLEEYRQHIEKDAALERRFQQVLVGEPSVEDTVG--ILRGIKER 357 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 E+ V+ T + A R A D L D++ + L+ME + +I Sbjct: 358 YEVHHGVRITDSALVAAAALSDRYITSRFLPDKAID--LVDES--ASRLRMEIDSRPVEI 413 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE 437 +E+E VR + E + DEA + +++ + + + Sbjct: 414 DEVERAVRRLEIEEVALSKETDEASKLRLEKLRQELADDREKLNQLMTRWQNEKSAIDQV 473 Query: 438 R-RQYLFEELKAQ-ENSQCDFDPMKM--RMESEIRGLLKGM 474 R + E L+ + E ++ D D K I L K + Sbjct: 474 RTLKEQLEALRGESERAERDGDLGKAAELRYGRIPSLEKQL 514 >gi|51535981|dbj|BAD38062.1| putative coiled-coil protein [Oryza sativa (japonica cultivar-group)] Length = 749 Score = 161 bits (409), Expect = 3e-38 Identities = 44/238 (18%), Positives = 77/238 (32%), Gaps = 39/238 (16%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC--------DV 177 C N+AC+ L +D FC C C IC K+D + W+ C D Sbjct: 143 CHNLACRATLNPED----------KFCRRCSCCICFKYDDNKDPSLWLFCSSDQPLQKDS 192 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWD 237 C CH +CA+++G + G G + ++C C ++L G K Sbjct: 193 CVFSCHLECALKDG--RTGIMQSGQCKKLDGGYYCTRCRKQNDLLGSWKKQLVIAKDARR 250 Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDS 297 + L + KI +E L D ++KL++++ N Sbjct: 251 LDVLCHRIFLSHKILVSTEKY--LVLHEIVDTAMKKLEAEVGPISGVANMGRGIVSRLAV 308 Query: 298 DSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRE 355 + Q C E ++ F+++R + + Sbjct: 309 GA------------EVQKLCARAIETMESL-----FCGSPSNLQFQRSRMIPSNFVKF 349 >gi|33945097|ref|XP_340696.1| heat shock protein 100 [Trypanosoma brucei] Length = 870 Score = 161 bits (409), Expect = 3e-38 Identities = 45/269 (16%), Positives = 82/269 (30%), Gaps = 21/269 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + +I +D + + + ++ + + Sbjct: 253 EFEERLKSVLNEVKES--SNGVILFIDEIHLVLGAGKSGGSMDAANLLKPMLARGELRTI 310 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ F PS+E E ++ E VQ T Sbjct: 311 GATTLEEYRTYVEKDAAFERRFMPVYVTEPSVE--ECISILRGLKDRYEAHHGVQITDNA 368 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + V A+ R A D L D+ACA +++ + I+ LE R + E Sbjct: 369 VVVAAQLANRYITNRFMPDKAID--LIDEACANVRVQL--SSRPEAIDILERKKRQLEIE 424 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 A + + A RE SKY + R+ E +E + L E+ Sbjct: 425 AKALERDKEAASRERLKLVKADIQRVEEELQPLVSKYNDERQRIDELQEMQSRLDEKKNK 484 Query: 449 QENSQCDF--DPMKMRMESEIRGLLKGME 475 E + D D + I + + Sbjct: 485 LERAVRDGKMDLAADLQYNVIPLIQDRIR 513 >gi|71837201|ref|ZP_00676967.1| AAA ATPase, central region:Clp, N terminal [Pelobacter propionicus DSM 2379] Length = 873 Score = 161 bits (407), Expect = 5e-38 Identities = 38/268 (14%), Positives = 87/268 (32%), Gaps = 24/268 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + +I +D + I + ++ + + Sbjct: 259 EFEERLKAVLNEVKEGEGRIILFIDELHTIVGAGKAEGAMDAGNMLKPMLARGELHCIGA 318 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ + P++E+ ++ E+ ++ + Sbjct: 319 TTLDEYRQHIEKDAALERRFQPVLVEQPTVEDTV--SILRGLRERFEVHHGIKIQDSALV 376 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R + A D L D+ACA+ L+ E +++ + V + E Sbjct: 377 AAATLSNRYITERFLPDKAID--LVDEACAM--LRTEIDSLPSELDTINRRVMQLEIEEV 432 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ--- 449 + + D A +E ++Y + A +R Q L E+++ Sbjct: 433 ALKKEKDRASQERLKALRRELADDRERANAMRAQYETEKC--AIQRIQGLREQIEKTRHD 490 Query: 450 -ENSQCD--FDPMKMRMESEIRGLLKGM 474 E ++ D + SE+ GL K + Sbjct: 491 IEQAERDSNLELASKLKYSEMPGLEKAL 518 >gi|23128455|ref|ZP_00110302.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc punctiforme PCC 73102] Length = 880 Score = 160 bits (406), Expect = 6e-38 Identities = 37/270 (13%), Positives = 87/270 (32%), Gaps = 23/270 (8%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V + ++ +D + + ++ + + + I Sbjct: 264 EFEERLKAVLKEIQEAQ--GQIVLFIDEIHTVVGAGATQGSMDASNLLKPMLARGELRCI 321 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ+ D PS+E+ ++ E+ V+ + Sbjct: 322 GATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTI--SILRGLKERYELHHGVKISDSA 379 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R A D L D A LKME K +++E++ + + E Sbjct: 380 LVAAATLSARYISDRFLPDKAID--LVD--EAAAKLKMEITSKPEELDEIDRKILQLEME 435 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYLFEE 445 Q + D A RE +++ R+ + + + + E Sbjct: 436 RLSLQKETDSASRERLERLERELAELKERQDALNAQWQAEKQIIDRIRQIRQEIERVNVE 495 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKGME 475 ++ E +++ S++ L + ++ Sbjct: 496 IQQAERDYDLNRAAELK-YSKLTELQRQLK 524 >gi|16331048|ref|NP_441776.1| ClpB protein [Synechocystis sp. PCC 6803] Length = 872 Score = 160 bits (406), Expect = 6e-38 Identities = 35/268 (13%), Positives = 81/268 (30%), Gaps = 20/268 (7%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D +I +D + + ++ + + I Sbjct: 256 EFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGALRCIGA 315 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQE D P++ + ++ E+ V+ + Sbjct: 316 TTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTI--SILRGLKERYEVHHGVKIADSALV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A LKME K +++E++ + + E Sbjct: 374 AAAMLSNRYISDRFLPDKAID--LVD--EAAAKLKMEITSKPEELDEVDRKILQLEMERL 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQE 450 Q + D A +E ++ + + + ++ + + + Sbjct: 430 SLQRENDSASKERLEKLEKELADFKEEQSKLNGQWQSEKTVIDQIRTVKETIDQVNLEIQ 489 Query: 451 NSQCDFD--PMKMRMESEIRGLLKGMEM 476 +Q D+D ++ L + +E Sbjct: 490 QAQRDYDYNKAAELQYGKLTDLQRQVEA 517 >gi|66854676|ref|ZP_00398756.1| AAA ATPase, central region:Clp, N terminal [Anaeromyxobacter dehalogenans 2CP-C] Length = 927 Score = 160 bits (406), Expect = 7e-38 Identities = 34/268 (12%), Positives = 75/268 (27%), Gaps = 20/268 (7%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKL---------FWKADELIE 272 F + + +I +D + I + + Sbjct: 309 EFEERLKAVLKEVTGSEGQIILFIDEMHTIVGAGAAEGAMDAGNMLKPALARGELHAVGA 368 Query: 273 KLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ PSL + ++ E+ V+ + Sbjct: 369 TTVNEYRKHIEKDPALERRFQPVFVGEPSLTDTI--SILRGLKDRYELHHKVRIQDAALV 426 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A + L++E +++E+ + + E Sbjct: 427 EAARLSSRYITDRFLPDKAID--LVD--EAASRLRIEIDSMPTEVDEVRRRIGQLEIERQ 482 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-QYLFEELKAQEN 451 + + DEA R ++ + E + + E LK ++ Sbjct: 483 GLRKEQDEASRARLAAVEKELAARNEEFTALKGRWDAEKAVIQELSQARQELEALKVEQA 542 Query: 452 S---QCDFDPMKMRMESEIRGLLKGMEM 476 + Q DF + L + ++ Sbjct: 543 AAERQADFQKAAEIKFGRLPELTRRVKA 570 >gi|66850118|gb|EAL90445.1| ATP-dependent Clp protease, putative [Aspergillus fumigatus Af293] Length = 797 Score = 160 bits (405), Expect = 7e-38 Identities = 38/265 (14%), Positives = 81/265 (30%), Gaps = 19/265 (7%) Query: 224 FVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + D +I +D + + + + + + + Sbjct: 176 FEERLKSVLKEVEDAQGGVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGELQCCGAT 235 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ PS+ ++ E+ V+ T + Sbjct: 236 TLNEYRLIEKDVALARRFQPIQVGEPSVAATI--SILRGIKNKYEVHHGVRITDAALVAA 293 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R A D L D A + L+++++ K I EL+ + Q E + Sbjct: 294 ATYSNRYITDRFLPDKAID--LVD--EAASALRLQQESKPDVIRELDRQITTIQIELESL 349 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELK-AQENS 452 + + D + RE T + K + E+ +R + E + + + Sbjct: 350 RKETDISSRERREKLQEDLKAKQEESAKLTEVWEKEKAEIESLKRTKEELERARFELDRA 409 Query: 453 QCDFDPMKM--RMESEIRGLLKGME 475 Q + + K S I L + Sbjct: 410 QREGNFAKAGELRYSTIPSLEAKLP 434 >gi|4481954|emb|CAB38512.1| SPBC16D10.08c [Schizosaccharomyces pombe] Length = 905 Score = 160 bits (405), Expect = 8e-38 Identities = 46/276 (16%), Positives = 83/276 (30%), Gaps = 38/276 (13%) Query: 232 CAPNWDFEALIKELDFVRKIFRGSE-------------------DARGKKLFWKADELIE 272 A + + + V K SE G ++ Sbjct: 249 VAGSKFRGEFEERIKSVLKEVEESETPIILFVDEMHLLMGAGSGGEGGMDAANLLKPMLA 308 Query: 273 KLKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV 323 + K I ++ FQ PS+E+ ++ E+ Sbjct: 309 RGKLHCIGATTLAEYKKYIEKDAAFERRFQIILVKEPSIEDTI--SILRGLKEKYEVHHG 366 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESI 383 V + R + A R R A D L D A +++ R+ + ++ LE Sbjct: 367 VTISDRALVTAAHLASRYLTSRRLPDSAID--LVD--EAAAAVRVTRESQPEVLDNLERK 422 Query: 384 VRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER-RQYL 442 +R + E + + DEA +E KY + +E + + Sbjct: 423 LRQLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRR 482 Query: 443 FEELKAQ-ENSQCDFD--PMKMRMESEIRGLLKGME 475 +ELKA+ E+++ D I L K +E Sbjct: 483 LDELKAKAEDAERRNDFTLAADLKYYGIPDLQKRIE 518 >gi|67907151|ref|ZP_00505556.1| AAA ATPase, central region:Clp, N terminal [Polaromonas sp. JS666] Length = 866 Score = 160 bits (405), Expect = 8e-38 Identities = 35/269 (13%), Positives = 79/269 (29%), Gaps = 22/269 (8%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + D I +D + + + + + + Sbjct: 252 EFEERLKTVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGA 311 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D P++E ++ E+ VQ T + Sbjct: 312 TTLDEYRKYIEKDAALERRFQKILVDEPTVEATIA--ILRGLQEKYEVHHGVQITDPAIV 369 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D A +K+E K ++ L+ + Q E + Sbjct: 370 AAAELSHRYITDRFLPDKAID--LID--EAAAKIKIEMDSKPEVMDRLDRRLIQLQIERE 425 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-----EAEERRQYLFEELK 447 + + DEA ++ + + + E + +++ Sbjct: 426 AVRREKDEASQKRFGLIEVEIAKLQKEISDLDEIWQAEKAQALGSKDVMEEIDRIRFQIE 485 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGMEM 476 DF+ + ++ L K ++ Sbjct: 486 EFTRKG-DFNKVAELQYGKLPELEKRLKA 513 >gi|29608171|dbj|BAC72226.1| putative ATP-dependent Clp protease [Streptomyces avermitilis MA-4680] Length = 870 Score = 160 bits (405), Expect = 8e-38 Identities = 45/281 (16%), Positives = 80/281 (28%), Gaps = 40/281 (14%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------- 276 D+ A + L V + S+ + ++ Sbjct: 242 DLGAMVAGAKYRGEFEERLKTVLAEIKDSDGQ-IITFIDELHTVVGAGAGGDSAMDAGNM 300 Query: 277 -------------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 + + ++ + FQ+ PS+E+ ++ Sbjct: 301 LKPMLARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPSVEDTIA--ILRGLKGR 358 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 E VQ + A R A D L D A + L+ME +I Sbjct: 359 YEAHHKVQIADSALVAAAALSDRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPVEI 414 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE- 436 +EL+ V + E + D A RE T+++ K + S Sbjct: 415 DELQRQVDRLKMEELAIGKETDAASRERLEKLRRDLADKEEELRGLTARWEKEKQSLNRV 474 Query: 437 -ERRQYLFEELKAQENSQCDF--DPMKMRMESEIRGLLKGM 474 E ++ L E E +Q D D + EI L + + Sbjct: 475 GELKEKLDELRGQAERAQRDGDFDTASKLLYGEIPALERDL 515 >gi|42527829|ref|NP_972927.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Treponema denticola ATCC 35405] Length = 859 Score = 160 bits (404), Expect = 1e-37 Identities = 34/266 (12%), Positives = 82/266 (30%), Gaps = 20/266 (7%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + + +I +D + + + + + Sbjct: 254 EFEERLKAVISEVQKSEGRVILFIDELHTLVGAGASEGSMDASNLLKPALARGELRAIGA 313 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ+ P++E+ ++ E+ V+ + Sbjct: 314 TTLNEYRKYIEKDAALERRFQQVYCPEPTVEDTIA--ILRGLQEKYEVHHGVRIRDEALI 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A + LKME + + +++++E + E Sbjct: 372 AAAVLSNRYITNRFLPDKAID--LVD--EAASRLKMEIESQPVELDQVERKILQLNIEKV 427 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-QYLFEELKAQEN 451 + D A +E +++ + E R+ + E+L+ +E Sbjct: 428 SIGKENDTASKERLLKLEEELAELSSKRNAMQAQWQNEKARINESRKYKEELEQLRIEET 487 Query: 452 SQ-CDFDPMKM--RMESEIRGLLKGM 474 + + K +I L K + Sbjct: 488 KYSREGNLNKAAELKYGKIPELEKKI 513 >gi|29610907|dbj|BAC74952.1| putative ATP-dependent Clp protease [Streptomyces avermitilis MA-4680] Length = 879 Score = 160 bits (404), Expect = 1e-37 Identities = 35/269 (13%), Positives = 81/269 (30%), Gaps = 23/269 (8%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V ++ +D + + ++ + + +I Sbjct: 259 EFEERLKAVLSEVKAAE--GRILLFVDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMI 316 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 317 GATTLDEYRKHIEKDAALERRFQQVLVDEPSVEDTI--SILRGLRERLEVFHGVKIQDTA 374 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R A D L D+ACA L+ E +++E+ V + E Sbjct: 375 LVSAATLSHRYITDRFLPDKAID--LVDEACA--RLRTEIDSMPAELDEITRRVTRLEIE 430 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQYLFEE 445 ++D A + +++ R E + + + E Sbjct: 431 EAALSKESDPASKTRLEELRRELADLRGEADAKHAQWEAERQAIRRVQELRQELEQVRHE 490 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKGM 474 + E + ++R ++ L + + Sbjct: 491 AEEAERAYDLNRAAELR-YGRLQDLERRL 518 Score = 41.0 bits (95), Expect = 0.079 Identities = 27/216 (12%), Positives = 64/216 (29%), Gaps = 22/216 (10%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 K DE +L++++ + I + + +L + Sbjct: 393 DKAIDLVDEACARLRTEIDSMPAELDEITRRVTRLEIEEAALSKESDPASKTRLEELRR- 451 Query: 321 AEVVQDTARKMEV--VAEEKMRMFKKARSVLDACDRELEDKACAVTD---LKMERQKKKP 375 + D + + E R + L ++ +A L + + Sbjct: 452 --ELADLRGEADAKHAQWEAERQAIRRVQELRQELEQVRHEAEEAERAYDLNRAAELRYG 509 Query: 376 QIEELESIVRLKQAEADMFQLKADEARR---EAEXXXXXXXXXXXXXXXXYTSKYLKLRL 432 ++++LE + ++ + Q + R E E RL Sbjct: 510 RLQDLERRLAAEEEQLAAKQGENRLLREVVTEEEIAEIVAAWTGIPVA----------RL 559 Query: 433 SEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIR 468 E E + +E+ +E + +K+ ++ IR Sbjct: 560 QEGEREKLLRLDEI-LRERVIGQDEAVKLVTDAIIR 594 >gi|46908440|ref|YP_014829.1| clpB protein [Listeria monocytogenes str. 4b F2365] Length = 866 Score = 160 bits (404), Expect = 1e-37 Identities = 37/261 (14%), Positives = 80/261 (30%), Gaps = 22/261 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + ++ +D + I + ++ + + I Sbjct: 256 EFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAMDAGNMLKPMLARGELHCIGA 315 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ P++E+ ++ EI V + Sbjct: 316 TTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTV--SILRGLKERFEIHHGVNIHDNALV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D+ACA +++E +++E+ V + E Sbjct: 374 AAASLSNRYITDRFLPDKAID--LVDEACA--TIRVEIDSMPSELDEVTRKVMQLEIEEA 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYLFEELK 447 + + D A SK+ ++ E E+ +L EL+ Sbjct: 430 ALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIREVREQIDHLRHELE 489 Query: 448 AQENSQCDFDPMKMRMESEIR 468 EN+ ++R +I Sbjct: 490 EAENNYDLNKAAELR-HGKIP 509 >gi|29376856|ref|NP_816010.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Enterococcus faecalis V583] Length = 868 Score = 160 bits (404), Expect = 1e-37 Identities = 29/251 (11%), Positives = 80/251 (31%), Gaps = 18/251 (7%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + I + ++ + + LI Sbjct: 256 EFEERLKAVLKEVKKSDGKIILFIDEIHNIVGAGKTEGSMDAGNLLKPMLARGELHLIGA 315 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ P++E+ ++ EI V + Sbjct: 316 TTLDEYRQYMEKDKALERRFQKVLVKEPTVEDTI--SILRGLKERFEIHHGVNIHDNALV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D+A A +++E +++++ + + E Sbjct: 374 AAATLSDRYITDRFLPDKAID--LVDEASA--TIRVEMNSMPTELDQVTRRLMQLEIEEA 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELK-AQE 450 + ++D+A ++ ++ + A ++ ++ K E Sbjct: 430 ALKKESDDASKKRLANLQEELADLREEANSMKMQWETEKEEVNAVSNKRAEIDKAKHELE 489 Query: 451 NSQCDFDPMKM 461 +++ ++D + Sbjct: 490 DAENNYDLERA 500 >gi|23123825|ref|ZP_00105864.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc punctiforme PCC 73102] Length = 872 Score = 159 bits (403), Expect = 1e-37 Identities = 37/267 (13%), Positives = 88/267 (32%), Gaps = 38/267 (14%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + + ++ + + + I Sbjct: 256 EFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGA 315 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ E V+ + + Sbjct: 316 TTLDEYRKHIEKDAALERRFQQVYVDQPSVED--SISILRGLRERYENHHGVKISDSALV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A LKME K +++E++ + + E Sbjct: 374 AAAVLSSRYISDRFLPDKAID--LVD--EAAARLKMEITSKPEELDEIDRKILQLEMEKL 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENS 452 Q ++D A RE + K +++ +E ++ L + +++++ Sbjct: 430 SLQKESDAASRERL------------------ERLEKE-IADLKEEQRTLNTQWQSEKDI 470 Query: 453 QCDFDPMKMRMES---EIRGLLKGMEM 476 +K +E EI+ + ++ Sbjct: 471 IDKIQSVKKEIERVNLEIQQAERDYDL 497 Score = 44.4 bits (104), Expect = 0.006 Identities = 37/270 (13%), Positives = 88/270 (32%), Gaps = 42/270 (15%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEA-------LIKELDFVRKIFRGSEDARGKKLFWK 266 C + L + K + + A F+ + + +R + E+ G K+ Sbjct: 311 RCIGATTLDEYRKHIEKDAALERRFQQVYVDQPSVEDSISILRGLRERYENHHGVKISDS 370 Query: 267 ADELIEKLKSKLIDPLDA-CNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 A L S+ I I D + L+ + +EI + Sbjct: 371 ALVAAAVLSSRYISDRFLPDKAI----DLVDEAAARLKMEITS----KPEELDEIDRKIL 422 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + + +E +R L+ ++E+ D L + Q +K I++++S+ + Sbjct: 423 QLEMEKLSLQKESDAA---SRERLERLEKEIADLKEEQRTLNTQWQSEKDIIDKIQSVKK 479 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 E + L+ +A R+ + ++ +L+ + L Sbjct: 480 ----EIERVNLEIQQAERDYDL-----------------NRAAELKYGNLTSLHRQLEAV 518 Query: 446 LKAQENSQCDFDPM--KMRMESEIRGLLKG 473 ++Q + + E++I ++ Sbjct: 519 EAELASAQRSGKSLLREEVTEADIAEIISK 548 >gi|6320464|ref|NP_010544.1| Oligomeric mitochondrial matrix chaperone that cooperates with Ssc1p in mitochondrial thermotolerance after heat shock; prevents the aggregation of misfolded matrix proteins; component of the mitochondrial proteolysis system; Hsp78p [Saccharomyces cerevisiae] Length = 811 Score = 159 bits (403), Expect = 1e-37 Identities = 39/269 (14%), Positives = 83/269 (30%), Gaps = 22/269 (8%) Query: 223 GFVKDVFQHCAPNWDFEAL-IKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + I +D V + + + + + I Sbjct: 191 EFEERLKKVLEEIDKANGKVIVFIDEVHMLLGLGKTDGSMDASNILKPKLARG-LRCISA 249 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ + PS+ + ++ E+ V+ T + Sbjct: 250 TTLDEFKIIEKDPALSRRFQPILLNEPSVSDTI--SILRGLKERYEVHHGVRITDTALVS 307 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D+ACAV L+++ + K +I++L+ + Q E + Sbjct: 308 AAVLSNRYITDRFLPDKAID--LVDEACAV--LRLQHESKPDEIQKLDRAIMKIQIELES 363 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYT-----SKYLKLRLSEAEERRQYLFEELKA 448 + + D E T + + A+ + EL+ Sbjct: 364 LKKETDPVSVERREALEKDLEMKNDELNRLTKIWDAERAEIESIKNAKANLEQARIELEK 423 Query: 449 QENSQCDFDPMKMRMESEIRGLLKGMEMT 477 + ++R S I L K + ++ Sbjct: 424 CQREGDYTKASELR-YSRIPDLEKKVALS 451 >gi|33634638|emb|CAE20624.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB [Prochlorococcus marinus str. MIT 9313] Length = 865 Score = 159 bits (403), Expect = 2e-37 Identities = 34/272 (12%), Positives = 85/272 (31%), Gaps = 32/272 (11%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + + ++ + + + I Sbjct: 255 EFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGA 314 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D P++++ ++ E+ V+ + Sbjct: 315 TTLDEHRQHIEKDPALERRFQQVLVDQPTVQDTI--SILRGLKERYEVHHGVRIADNALV 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR L DKA + LKME K +I+E++ + Sbjct: 373 AAAVLSSRYI---------ADRFLPDKAIDLMDESAARLKMEITSKPEEIDEIDRKIVQL 423 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYL 442 + E ++D +E +++ + + LS +E + + Sbjct: 424 EMEKLSLGRESDSVSKERLEKLERELAELAEQQSALNAQWQQEKGAIDDLSSLKEEIERV 483 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 +++ + S ++ + GL K + Sbjct: 484 QLQVEQAKRSYDLNKAAELE-YGTLAGLQKQL 514 Score = 47.1 bits (111), Expect = 0.001 Identities = 39/269 (14%), Positives = 90/269 (33%), Gaps = 39/269 (14%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + + + A F+ + + I RG ++ ++ Sbjct: 310 RCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVQDTISILRGLKE------RYEVHHG 363 Query: 271 IEKLKSKLIDPLDACNFIL--MFFQECDSDSPSLENGEGG-FLIAPQDACNEIAEVVQDT 327 + + L+ + + F + D + + + +EI + Sbjct: 364 VRIADNALVAAAVLSSRYIADRFLPDKAIDLMDESAARLKMEITSKPEEIDEIDRKIVQL 423 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + + E + K+ L+ +REL + A + L + Q++K I++L S Sbjct: 424 EMEKLSLGRESDSVSKER---LEKLERELAELAEQQSALNAQWQQEKGAIDDLSS----L 476 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + E + QL+ ++A+R + +K +L ++ L E+ Sbjct: 477 KEEIERVQLQVEQAKRSYDL-----------------NKAAELEYGTLAGLQKQLSEKET 519 Query: 448 AQENSQCDFDPMKMRM---ESEIRGLLKG 473 A D +R E +I ++ Sbjct: 520 ALAQDGEAGDKSLLREEVTEDDIADVIAK 548 >gi|3560150|emb|CAA20737.1| SPBC4F6.17c [Schizosaccharomyces pombe] Length = 803 Score = 159 bits (403), Expect = 2e-37 Identities = 31/249 (12%), Positives = 79/249 (31%), Gaps = 21/249 (8%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFI 288 +I +D + + + + + K + ++ + Sbjct: 203 EGKVILFVDEMHLLLGFGKAEGSIDASNLLKPALARGKLHCCGATTLEEYRKYIEKDAAL 262 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ + PS+ + ++ E+ V+ T + A R Sbjct: 263 ARRFQAVMVNEPSVADTI--SILRGLKERYEVHHGVRITDDALVTAATYSARYITDRFLP 320 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXX 408 A D L D+AC + L+++++ K ++ L+ + Q E + + + D E Sbjct: 321 DKAID--LVDEAC--SSLRLQQESKPDELRRLDRQIMTIQIELESLRKETDTTSVERREK 376 Query: 409 XXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELKAQENSQCDFDPMKMRM 463 ++ + + R + +A+ + EL+ + +++ Sbjct: 377 LESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERTQREGNYARASELQ- 435 Query: 464 ESEIRGLLK 472 + I L + Sbjct: 436 YAIIPELER 444 >gi|74022612|ref|ZP_00693193.1| AAA ATPase, central region:Clp, N terminal [Rhodoferax ferrireducens DSM 15236] Length = 870 Score = 159 bits (402), Expect = 2e-37 Identities = 33/255 (12%), Positives = 78/255 (30%), Gaps = 21/255 (8%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 D I +D + + + + + + + ++ Sbjct: 265 AKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVEKD 324 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ P++E+ ++ A E VQ T + AE R Sbjct: 325 AALERRFQKILVGEPTVEDTIA--ILRGLQAKYETHHGVQITDPAIVAAAELSHRYITDR 382 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 A D L D A + +K+E K +++L+ + Q E + + + DEA ++ Sbjct: 383 FLPDKAID--LID--EAASKIKIELDSKPEVMDKLDRRLIQLQIEREAVRREKDEASQKR 438 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-----ERRQYLFEELKAQENSQCDFDPMK 460 + + E + + +++ + Sbjct: 439 FGLIEEEIVRLQKEIADLDEIWKAEKAQAQGSKAIMEEIEKVRFQIEELTRKGDFNRAGE 498 Query: 461 MRMESEIRGLLKGME 475 ++ ++ GL K ++ Sbjct: 499 LQ-YGKLPGLEKQLK 512 >gi|33639012|emb|CAE08018.1| endopeptidase Clp ATP-binding chain B [Synechococcus sp. WH 8102] Length = 875 Score = 159 bits (402), Expect = 2e-37 Identities = 29/249 (11%), Positives = 77/249 (30%), Gaps = 19/249 (7%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 ++ +D + + ++ + + + I ++ + Sbjct: 285 GQIVLFIDEIHTVVGAGASGGAMDASNLLKPMLARGELRCIGATTLDEHRQHIEKDPALE 344 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ+ D P++ + ++ E+ V+ + A R Sbjct: 345 RRFQQVLVDQPTVPDTI--SILRGLKERYEVHHGVRIADSALVAAAMLSSRYITDRFLPD 402 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D++ LKME K QI+E++ + + E ++D A +E Sbjct: 403 KAID--LVDES--AARLKMEITSKPEQIDEIDRKILQLEMEKLSLGRESDSASQERLQRI 458 Query: 410 XXXXXXXXXXXXXYTSKYLKLR---LSEAEERRQYLFEELKAQENSQC-DFDPMKMRMES 465 +++ + + + + +L+ ++ + D + Sbjct: 459 ERELAELGEQQSSLNAQWQSEKGAIDQLSALKEEIERVQLQVEQAKRNYDLNKAAELEYG 518 Query: 466 EIRGLLKGM 474 + L + + Sbjct: 519 TLATLQRQL 527 Score = 45.2 bits (106), Expect = 0.004 Identities = 30/200 (15%), Positives = 68/200 (34%), Gaps = 27/200 (13%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + + + A F+ + + I RG ++ ++ Sbjct: 323 RCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVPDTISILRGLKE------RYEVHHG 376 Query: 271 IEKLKSKL-IDPLDACNFILMFFQE------CDSDSPSLENGEGGFLIAPQDACNEIAEV 323 + S L + + +I F D + L+ + +EI Sbjct: 377 VRIADSALVAAAMLSSRYITDRFLPDKAIDLVDESAARLKMEITS----KPEQIDEIDRK 432 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESI 383 + + + E ++ L +REL + + L + Q +K I++L + Sbjct: 433 ILQLEMEKLSLGRESDSASQER---LQRIERELAELGEQQSSLNAQWQSEKGAIDQLSA- 488 Query: 384 VRLKQAEADMFQLKADEARR 403 + E + QL+ ++A+R Sbjct: 489 ---LKEEIERVQLQVEQAKR 505 >gi|9651530|gb|AAF91178.1| ClpB [Phaseolus lunatus] Length = 977 Score = 158 bits (400), Expect = 3e-37 Identities = 33/251 (13%), Positives = 80/251 (31%), Gaps = 21/251 (8%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFIL 289 +I +D + + + ++ + + ++ ++ + Sbjct: 359 GQIILFIDEIHTVVGAGATSGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPALE 418 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ+ PS+E+ ++ E+ V+ + + A R + Sbjct: 419 RRFQQVFCSQPSVEDTI--SILRGLRERYELHHGVKISDSALVSAAVLADRYITERFLPD 476 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A LKME K +++E++ + + E + D+A +E Sbjct: 477 KAID--LVD--EAAAKLKMEITSKPTELDEIDRAILKLEMEKLSLKNDTDKASKERLSKL 532 Query: 410 XXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYLFEELKAQENSQCDFDPMKMRME 464 ++ R+ +E + E++A E +++ Sbjct: 533 ENDLSLLKQKQKELAEQWDNEKVFMTRIRSIKEEIDRVNLEMEAAERDYDLNRAAELK-Y 591 Query: 465 SEIRGLLKGME 475 + L + +E Sbjct: 592 GTLMSLQRQLE 602 Score = 45.6 bits (107), Expect = 0.003 Identities = 28/202 (13%), Positives = 62/202 (30%), Gaps = 29/202 (14%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K + + A F+ + ++ I RG + ++ Sbjct: 397 RCIGATTLNEYRKYIEKDPALERRFQQVFCSQPSVEDTISILRGLRE------RYELHHG 450 Query: 271 IEKLKSKLIDPLD-ACNFILMFFQE----CDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 ++ S L+ A +I F D + EI Sbjct: 451 VKISDSALVSAAVLADRYITERFLPDKAIDLVDEAAA------------KLKMEITSKPT 498 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELE---S 382 + + + +M A L ++ LK ++++ Q + + + Sbjct: 499 ELDEIDRAILKLEMEKLSLKNDTDKASKERLSKLENDLSLLKQKQKELAEQWDNEKVFMT 558 Query: 383 IVRLKQAEADMFQLKADEARRE 404 +R + E D L+ + A R+ Sbjct: 559 RIRSIKEEIDRVNLEMEAAERD 580 >gi|399265|sp|P17422|CLPB_BACNO Chaperone clpB Length = 860 Score = 158 bits (399), Expect = 4e-37 Identities = 34/250 (13%), Positives = 76/250 (30%), Gaps = 21/250 (8%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + + + + + I ++ + Sbjct: 275 GQIILFIDEIHTMVGAGKSEGSLDAGNMLKPALARGDLHCIGATTLDEYRQYMEKDAALE 334 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ+ D PS+E+ ++ E+ + T + A+ R + Sbjct: 335 RRFQKVIVDEPSVEDTIA--ILRNLQERYEVHHGINITDPALVAAAQLSHRYISGRKLPD 392 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A ++ME K +++++ + Q E + + D A + Sbjct: 393 KAID--LMD--EAAAQIRMELDSKPEVMDKIDRRLIQLQIERMALEKETDAASKRRLSDL 448 Query: 410 XXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELKAQENSQCDFDPMKMRME 464 +L + +E +E+ L EL+A + +++ Sbjct: 449 EAEIAAQEKEYADLEEIWLAEKAGNAGAAEIKEQLDKLRVELEAAKRRGDFARASEIQ-Y 507 Query: 465 SEIRGLLKGM 474 I K + Sbjct: 508 GLIPAKEKQL 517 >gi|67923982|ref|ZP_00517435.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Crocosphaera watsonii WH 8501] Length = 872 Score = 157 bits (398), Expect = 6e-37 Identities = 36/274 (13%), Positives = 87/274 (31%), Gaps = 27/274 (9%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D +I +D + + ++ + + + I Sbjct: 256 EFEERLKAVLKEVTDSQGNIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGA 315 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQE D P++ + ++ E+ V+ + Sbjct: 316 TTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTI--SILRGLKERYEVHHGVKIADTALV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D++ LKME K +++E + + + E Sbjct: 374 AAAMLSNRYISDRFLPDKAID--LVDES--AAKLKMEITSKPEELDEADRKILQLEMERL 429 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 Q + D A RE +++ K + + + ++ + + + Sbjct: 430 SLQKEVDIASRERLQRLEKELANLKEEQSQLNAQWQAEKEVIDQIRQLKETMDQVNLEIQ 489 Query: 451 NSQCDFDPMKM---------RMESEIRGLLKGME 475 ++ D+D K ++ +++ L +E Sbjct: 490 QAERDYDLNKAAELRYGKLTDLQGQVKELESKIE 523 Score = 41.4 bits (96), Expect = 0.050 Identities = 41/271 (15%), Positives = 90/271 (33%), Gaps = 44/271 (16%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K + + A F+ + + I RG ++ ++ Sbjct: 311 RCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTISILRGLKE------RYEVHHG 364 Query: 271 IEKLKSKLIDPLDACN-FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIA---EVVQD 326 ++ + L+ N +I F + L + EI E + + Sbjct: 365 VKIADTALVAAAMLSNRYISDRFLPDKAI--DLVDESAA------KLKMEITSKPEELDE 416 Query: 327 TARKMEVVAEEKMRMFKK----ARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELES 382 RK+ + E++ + K+ +R L ++EL + + L + Q +K I+ Sbjct: 417 ADRKILQLEMERLSLQKEVDIASRERLQRLEKELANLKEEQSQLNAQWQAEKEVID---- 472 Query: 383 IVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL 442 +R + D L+ +A R+ + K L+ ++ E + + L Sbjct: 473 QIRQLKETMDQVNLEIQQAERDYDLNKAAELRYGKLTDLQGQVKELESKIEERQTTGKTL 532 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 E +ES+I ++ Sbjct: 533 LRE---------------EVIESDIAEIISK 548 >gi|39982528|gb|AAR33988.1| ClpB protein [Geobacter sulfurreducens PCA] Length = 865 Score = 157 bits (397), Expect = 7e-37 Identities = 35/268 (13%), Positives = 77/268 (28%), Gaps = 23/268 (8%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + +I +D + + + + + Sbjct: 256 EFEERLKAVIREVAKSEGKVILFIDELHTLVGAGAAEGAMDASNMLKPALARGELHCIGA 315 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ+ + PS+E+ ++ E ++ + Sbjct: 316 TTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIA--ILRGLKEKYENYHGIRIKDSAII 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A + L++E +I+E+E + + E Sbjct: 374 AAATLSDRYITDRFLPDKAID--LID--EAASRLRIEIDSMPTEIDEVERRIIQLEIEKQ 429 Query: 393 MFQLKA-DEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYLFEEL 446 ++ D E + + R+S +R + EE Sbjct: 430 ALLRESQDPHSLERLKKLADELEELKAKSAELKGHWQREKDIIGRVSSLRQRLEEKREEA 489 Query: 447 KAQENSQCDFDPMKMRMESEIRGLLKGM 474 K E ++R EI + K + Sbjct: 490 KKAEREGNLARTAEIR-YGEIPAIEKEI 516 Score = 37.5 bits (86), Expect = 0.86 Identities = 25/218 (11%), Positives = 63/218 (28%), Gaps = 35/218 (16%) Query: 215 CNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGK---------- 261 C + L + K + + A F+ + ++ I RG ++ Sbjct: 312 CIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIAILRGLKEKYENYHGIRIKDSA 371 Query: 262 -------------------KLFWKADELIEKLKSKLIDPLDA-CNFILMFFQECDSDSPS 301 K DE +L+ ++ Q Sbjct: 372 IIAAATLSDRYITDRFLPDKAIDLIDEAASRLRIEIDSMPTEIDEVERRIIQLEIEKQAL 431 Query: 302 LENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDAC--DRELEDK 359 L + + + E ++ + +++ + + + + S+ RE K Sbjct: 432 LRESQDPHSLERLKKLADELEELKAKSAELKGHWQREKDIIGRVSSLRQRLEEKREEAKK 491 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 A +L + + +I +E + + AE + + + Sbjct: 492 AEREGNLARTAEIRYGEIPAIEKEIADRSAELEDIRKE 529 >gi|44983280|gb|AAS52462.1| AEL223Cp [Ashbya gossypii ATCC 10895] Length = 803 Score = 156 bits (396), Expect = 9e-37 Identities = 42/249 (16%), Positives = 80/249 (32%), Gaps = 19/249 (7%) Query: 236 WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP--------LDACNF 287 +I +D V + + + K + I ++ Sbjct: 193 KSEGQVIVFIDEVHMLLGLGKTDGSMDASNILKPRLAKGM-RCISATTFDEFKIIEKDPA 251 Query: 288 ILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARS 347 + FQ D PS+ + ++ E+ V+ T + A R Sbjct: 252 LTRRFQPVILDEPSVSDTI--SILRGLKERYEVHHGVRITDTAIVSAAVLSNRYINDRFL 309 Query: 348 VLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEX 407 A D L D+ACAV L+++ + K I+ ++ + + E + + + D E Sbjct: 310 PDKAID--LVDEACAV--LRLQHESKPDSIQAIDRAIMTMEIELESLRKEEDPVSLERAD 365 Query: 408 XXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELKA-QENSQCDFDPMKM--RM 463 T + K + EA + + E+ K E +Q + D K Sbjct: 366 ALKKSLKEKNDELEKLTKVWDKEKKEIEAIKSAKATLEQAKIDLEIAQREGDYGKASELR 425 Query: 464 ESEIRGLLK 472 ++I L K Sbjct: 426 YAKIPQLEK 434 >gi|50955821|ref|YP_063109.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 734 Score = 156 bits (396), Expect = 9e-37 Identities = 37/255 (14%), Positives = 75/255 (29%), Gaps = 29/255 (11%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFI 288 +I +D + + ++ + + +LI ++ + Sbjct: 144 EGRIITFVDELHILMGAGGGEGSVAASNMLKPMLARGELRLIGATTLDEYREFIEKDAAL 203 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ+ PS+E+ ++ E V + A R Sbjct: 204 ERRFQQVYVGEPSVEDTVA--ILRGLKGRYEAHHGVTIEDSALVAAASLSNRYI------ 255 Query: 349 LDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 R+L DKA A + LKME +I+ L+ V + E + + D A + Sbjct: 256 ---TARQLPDKAIDLIDEAASRLKMEIDSAPVEIDTLQRQVERIKLEEFALKKEKDAASK 312 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQENSQCDFDPMKM 461 E ++ + + E R L E A++ + D + Sbjct: 313 ERLEQLRQRLGEQQRELTELQERWWSEKAALTRVGELRSQLDEAKTARDLALRDGRYQEA 372 Query: 462 RM--ESEIRGLLKGM 474 I + + + Sbjct: 373 SRIEYETIPNIEREL 387 >gi|50876799|emb|CAG36639.1| probable heat shock protein ClpB [Desulfotalea psychrophila LSv54] Length = 868 Score = 156 bits (395), Expect = 1e-36 Identities = 35/272 (12%), Positives = 75/272 (27%), Gaps = 32/272 (11%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + +I +D + I + + + Sbjct: 256 EFEDRLKAVLKEVEKQAGNIILFIDELHTIVGAGASEGSMDASNMLKPALARGELHCVGA 315 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ PS+E+ ++ EI V+ Sbjct: 316 TTLNEYKKYIEKDTALERRFQPVLVQEPSVEDTVA--ILRGIKEKYEIHHGVRIQDAATV 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 R DR L DKA A + L++E +I++L+ Sbjct: 374 AAVTLSNRYI---------ADRFLPDKAIDLIDEAASQLRIEIDSMPTEIDQLQRKCMKL 424 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYL 442 + E + + + D A ++ R +S +E Sbjct: 425 EIEQEALKKEKDSASISRLQESKKQLADLSDELKGLMGQWNIERETIAGISSIKEEIDAA 484 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 E + E + ++R ++ GL + + Sbjct: 485 QAEEQLAERAGDLQKVAQIR-YQKLPGLGEKL 515 >gi|67931988|ref|ZP_00525140.1| AAA ATPase, central region:Clp, N terminal [Solibacter usitatus Ellin6076] Length = 869 Score = 156 bits (394), Expect = 1e-36 Identities = 31/266 (11%), Positives = 76/266 (28%), Gaps = 20/266 (7%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D +I +D + + + ++ + + I Sbjct: 249 EFEERLKAVLKEVLDAAGEIILFIDELHTVVGAGKTEGSMDAGNLLKPMLARGELHCIGA 308 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D PS+E+ ++ E+ V+ + Sbjct: 309 TTLDEYRKYIEKDAALARRFQPVMVDQPSVEDTI--SILRGLKERYEVHHGVRIKDAALV 366 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D++ L+ E +++E + + E + Sbjct: 367 AAAVLSDRYITDRFLPDKAID--LVDES--AARLRTEIDSMPVELDETRRRIMQLEIERE 422 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE-- 450 + + D+A +E +++ + R E E Sbjct: 423 ALRKEKDKASKERLTKLEKELADLKAESDELMARWQAEKDEVQRLRTLREQVEQTKLEIG 482 Query: 451 NSQCDFDP--MKMRMESEIRGLLKGM 474 ++ +D ++ L + + Sbjct: 483 QAERQYDLNRAAELKYGKLAQLERQL 508 >gi|19713201|gb|AAL94040.1| ClpB protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 864 Score = 156 bits (394), Expect = 2e-36 Identities = 33/253 (13%), Positives = 82/253 (32%), Gaps = 19/253 (7%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDAC 285 +I +D + I + ++ + + ++I ++ Sbjct: 272 EESNGNIILFIDEIHTIVGAGKGEGSLDAGNMLKPMLARGELRVIGATTIDEYRKYIEKD 331 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ + P++++ ++ E V+ T + A R Sbjct: 332 PALERRFQTILVNEPNVDDTI--SILRGLKDKFETYHGVRITDTAIVEAATLSQRYISDR 389 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 + A D L D A ++ E ++++L + E + + D+A +E Sbjct: 390 KLPDKAID--LID--EAAAMIRTEIDSMPEELDQLTRKALQLEIEIKALEKETDDASKER 445 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEELK-AQENSQCDFDPMKM-- 461 TSK+ + ++ + + E +K E ++ ++D K+ Sbjct: 446 LKVIEKELAELNEEKKVLTSKWELEKEDISKIKNIKREIENVKLEMEKAEREYDLTKLSE 505 Query: 462 RMESEIRGLLKGM 474 ++ L K + Sbjct: 506 LKYGKLATLEKEL 518 >gi|70800165|gb|AAZ10006.1| serine peptidase, putative [Leishmania major strain Friedlin] Length = 817 Score = 155 bits (393), Expect = 2e-36 Identities = 37/256 (14%), Positives = 77/256 (30%), Gaps = 20/256 (7%) Query: 234 PNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKS---------KLIDPLD 283 +I +D + + GS + + + + ++ Sbjct: 207 TIESHGKVILFIDELHTLVGAGSSGDGSMDAANLLKPSLARGELHCIGATTLDEYRQHIE 266 Query: 284 ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFK 343 + FQ P++E ++ E + A R Sbjct: 267 KDAALARRFQSVLVTEPTVEETI--SILRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLS 324 Query: 344 KARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 + R A D L D A + L+++++ K ++ +E + + EA+ + DE + Sbjct: 325 ERRLPDKAID--LID--EAASRLRLQQESKPEALDLIERELIRLKIEAEAVKKDKDEVGK 380 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQENSQCDFDPMKM 461 E ++ K + ++R + L E + D K Sbjct: 381 EKLENLYEQISQKQKEYDALEERWKKEKNLFQTIKQRTEELDVLRHHLEQAMNSGDFAKA 440 Query: 462 --RMESEIRGLLKGME 475 S+I LLK +E Sbjct: 441 GEIQHSQIPNLLKQIE 456 >gi|62426046|ref|ZP_00381176.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Brevibacterium linens BL2] Length = 868 Score = 155 bits (393), Expect = 2e-36 Identities = 35/283 (12%), Positives = 76/283 (26%), Gaps = 40/283 (14%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------- 276 D+ A + V + + ++ + ++ + Sbjct: 243 DLSAMVAGAKYRGEFEERFKAVLEEIKNADGQ-IITFIDELHTVVGAGATGDSAMDAGNM 301 Query: 277 -------------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 + + ++ + FQ+ P++E+ ++ Sbjct: 302 LKPMLARGELRLVGATTLDEYRENIEKDPALERRFQQVYVGEPNVEDTVA--ILRGLKER 359 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 E V + A R + A D L D A + L+ME +I Sbjct: 360 YEAHHKVSINDGALIAAATMSNRYITGRQLPDKAID--LVD--EAASRLRMEIDSAPVEI 415 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE- 436 +EL V + E + D A E + + R Sbjct: 416 DELRRAVDRLKMEDMALSKETDTASIERLGALRADLADREEELHGLEATWESQRAGLNRV 475 Query: 437 -ERRQYLFEELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 + + L + + +Q D D + EI + K +++ Sbjct: 476 GDLKTKLDDLRSQADKAQRDTDLETASRLLYGEIPAVQKEIDI 518 >gi|70799667|gb|AAZ09583.1| Serine peptidase, putative [Leishmania major strain Friedlin] Length = 867 Score = 155 bits (392), Expect = 2e-36 Identities = 41/267 (15%), Positives = 84/267 (31%), Gaps = 20/267 (7%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + + + +I +D + + + L+ + + Sbjct: 253 EFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKPLLARGELRTIGA 312 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ F PS+E E ++ E VQ T + + Sbjct: 313 TTLEEYRQYVEKDAAFERRFMPVQVHEPSVE--ECTSILRGLKDRYEQHHGVQITDKAVV 370 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 V A+ R A D L D+ACA ++++ + +I+ LE R + E Sbjct: 371 VAAQLAGRYITNRFLPDKAID--LIDEACA--NVRVTLSSRPAEIDALERKKRQLEIEER 426 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL--RLSEAEERRQYLFEELKAQE 450 Q D + +E +KY + R+ E + + L E+ E Sbjct: 427 ALQRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDEKKVKLE 486 Query: 451 NSQ--CDFDPMKMRMESEIRGLLKGME 475 ++ D + + I L + Sbjct: 487 RAERMRDMETAADLKYNVIPILQDRIR 513 >gi|7380324|emb|CAB84911.1| ClpB protein [Neisseria meningitidis Z2491] Length = 859 Score = 155 bits (392), Expect = 3e-36 Identities = 33/243 (13%), Positives = 77/243 (31%), Gaps = 19/243 (7%) Query: 244 ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFILMFFQE 294 +D + + + + + + I ++ + FQ+ Sbjct: 276 FIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQK 335 Query: 295 CDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDR 354 PS+E+ ++ EI + T + AE R A D Sbjct: 336 VLVGEPSVEDTIA--ILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID- 392 Query: 355 ELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXX 414 L D A + +KME++ K +++++ + + E + + D+A ++ Sbjct: 393 -LID--EAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIN 449 Query: 415 XXXXXXXXYTSKYLKLR-LSEAEERRQYLFEELK-AQENSQCDFDPMKM--RMESEIRGL 470 + + +S+ + +E+K E ++ D M ++ L Sbjct: 450 GLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEHL 509 Query: 471 LKG 473 K Sbjct: 510 EKQ 512 >gi|50309407|ref|XP_454711.1| unnamed protein product [Kluyveromyces lactis] Length = 825 Score = 155 bits (392), Expect = 3e-36 Identities = 44/283 (15%), Positives = 82/283 (28%), Gaps = 43/283 (15%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACN 286 D+ A + L V S + + L+ K+ +DA N Sbjct: 190 DLSSLVAGAKYRGEFEERLKNVLDEIDKSNG-KIIVFIDEVHMLLGLGKT--DGSMDASN 246 Query: 287 ----------------------------FILMFFQECDSDSPSLENGEGGFLIAPQDACN 318 + FQ + PS+ + ++ Sbjct: 247 ILKPRLARGLRCISATTLDEFKIIEKDPALTRRFQPIILNEPSVHDTI--SILRGLKEKY 304 Query: 319 EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIE 378 E+ V+ T + A R A D L D+ACAV L+++ + K I+ Sbjct: 305 EVHHGVRITDSALVSAAVLSNRYINDRFLPDKAID--LVDEACAV--LRLQHESKPDSIQ 360 Query: 379 ELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE---- 434 ++ V Q E + + + D E T + + Sbjct: 361 AIDRAVMTMQIELESLKKETDPVSVERREELEKDLEVKKKELERLTEIWETEKSELDSIK 420 Query: 435 -AEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 A+E L EL + ++R ++I L + + + Sbjct: 421 TAKEDLDKLRTELDICQREGDYAKASELR-YAKIPELERKVAL 462 >gi|9755800|emb|CAC01744.1| clpB heat shock protein-like [Arabidopsis thaliana] Length = 968 Score = 154 bits (391), Expect = 4e-36 Identities = 39/268 (14%), Positives = 79/268 (29%), Gaps = 22/268 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + D +I +D + + ++ + + + I Sbjct: 330 EFEDRLKAVLKEVTDSEGQIILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGA 389 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D P++E+ ++ E+ V+ + + Sbjct: 390 TTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTI--SILRGLRERYELHHGVRISDSALV 447 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A LKME K ++EL+ V + E Sbjct: 448 EAAILSDRYISGRFLPDKAID--LVD--EAAAKLKMEITSKPTALDELDRSVIKLEMERL 503 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYLFEELK 447 D+A RE T ++ RL +E + E++ Sbjct: 504 SLTNDTDKASRERLNRIETELVLLKEKQAELTEQWEHERSVMSRLQSIKEEIDRVNLEIQ 563 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGME 475 E +++ + L + + Sbjct: 564 QAEREYDLNRAAELK-YGSLNSLQRQLN 590 >gi|7435720|pir||D71409 probable endopeptidase Clp ATP-binding chain - Arabidopsis thaliana Length = 831 Score = 154 bits (391), Expect = 4e-36 Identities = 36/267 (13%), Positives = 82/267 (30%), Gaps = 22/267 (8%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 + +K V + ++ +D + + + ++ + + Sbjct: 220 QFEERLKSVLKAVEEAQ--GKVVLFIDEIHMALGACKASGSTDAAKLLKPMLARGQLRFI 277 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ FQ+ PS+ + ++ E V+ R Sbjct: 278 GATTLEEYRTHVEKDAAFERRFQQVFVAEPSVPDTI--SILRGLKEKYEGHHGVRIQDRA 335 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + + A+ R R A D L D++CA +++ Q +I+ LE V + E Sbjct: 336 LVLSAQLSERYITGRRLPDKAID--LVDESCAHVKAQLDIQ--PEEIDSLERKVMQLEIE 391 Query: 391 ADMFQLKADE-ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLFEELK 447 + + D+ A T KY K + E +Q + + Sbjct: 392 IHALEKEKDDKASEARLSEVRKELDDLRDKLEPLTIKYKKEKKIINETRRLKQNRDDLMI 451 Query: 448 AQENSQCDFD--PMKMRMESEIRGLLK 472 A + ++ D + I+ + Sbjct: 452 ALQEAERQHDVPKAAVLKYGAIQEVES 478 >gi|50916753|ref|XP_468773.1| putative heat shock protein [Oryza sativa (japonica cultivar-group)] Length = 978 Score = 154 bits (390), Expect = 4e-36 Identities = 36/270 (13%), Positives = 83/270 (30%), Gaps = 22/270 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + D + I +D + + ++ + + + I Sbjct: 337 EFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGA 396 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ E+ V+ + + Sbjct: 397 TTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTI--SILRGLRERYELHHGVRISDSALV 454 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D++ LKME K ++E++ V + E Sbjct: 455 AAALLSDRYISGRFLPDKAID--LVDES--AAKLKMEITSKPTALDEIDRAVIKLEMERL 510 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYLFEELK 447 D+A R+ T ++ + ++ +E + E++ Sbjct: 511 SLTNDTDKASRDRLSRIEAELSLLKEKQKDLTEQWEREKSVMTKIQSIKEEIDRVNVEIQ 570 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 E +++ + L + ++ T Sbjct: 571 QAEREYDLNRAAELK-YGSLNALQRQLQTT 599 Score = 42.9 bits (100), Expect = 0.021 Identities = 40/270 (14%), Positives = 79/270 (29%), Gaps = 42/270 (15%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K + + A F+ + ++ I RG + ++ Sbjct: 392 RCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTISILRGLRE------RYELHHG 445 Query: 271 IEKLKSKL-IDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTAR 329 + S L L + +I F + L + EI Sbjct: 446 VRISDSALVAAALLSDRYISGRFLPDKAI--DLVDESAA------KLKMEITSKPTALDE 497 Query: 330 KMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK-- 387 V + +M A R+ + A L E+QK + E E V K Sbjct: 498 IDRAVIKLEMERLSLTNDTDKAS-RDRLSRIEAELSLLKEKQKDLTEQWEREKSVMTKIQ 556 Query: 388 --QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 + E D ++ +A RE + ++ +L+ ++ L Sbjct: 557 SIKEEIDRVNVEIQQAEREYDL-----------------NRAAELKYGSLNALQRQLQTT 599 Query: 446 LKAQENSQCDFDPM--KMRMESEIRGLLKG 473 K + Q M + + +I ++ Sbjct: 600 EKELDEYQSSGKSMLREEVTQDDIAEIVSR 629 >gi|67934490|ref|ZP_00527533.1| AAA ATPase, central region:Clp, N terminal [Solibacter usitatus Ellin6076] Length = 883 Score = 154 bits (389), Expect = 5e-36 Identities = 33/274 (12%), Positives = 80/274 (29%), Gaps = 32/274 (11%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + D +I +D + + + + + Sbjct: 256 EFEDRLKAVVKEIIDSNGEIICFIDELHTLVGAGSAEGAIDAANLLKPALARGELRCIGA 315 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ PS+++ ++ EI V+ + Sbjct: 316 TTLNEYKKHVEKDAALARRFQTVMVGEPSVDDTIA--ILRGLKEKFEIHHGVRIKDSAIL 373 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 A R DR L DKA A + L+++ +I+ LE + Sbjct: 374 AAAVLSQRYI---------ADRFLPDKAIDLIDEAGSALRLQIGSMPIEIDNLERRISHL 424 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYL 442 + E + D A + ++ + R+ +E++ L Sbjct: 425 EIERQALSKERDHASHDRLRHVENELESLRGEAAGLKERWSREKGAIDRVRTLKEQQDSL 484 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 +E + + ++R ++ + K ++ Sbjct: 485 RQEEEKASRAGDWEKAAQLR-YGQLSQIEKDIQA 517 >gi|67921632|ref|ZP_00515150.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Crocosphaera watsonii WH 8501] Length = 887 Score = 154 bits (389), Expect = 6e-36 Identities = 40/275 (14%), Positives = 87/275 (31%), Gaps = 28/275 (10%) Query: 224 FVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLKSKLIDP 281 F + + + + +I +D + + ++ + + + I Sbjct: 257 FEERLQAVMREVTNSDGHIILFIDELHNVVGTGSREGSSMDAGNLLKPMLARGELRCIGA 316 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ PS+++ ++ E+ V+ T + Sbjct: 317 TTLDEYRKHVEKDPALERRFQQVYVKQPSVDDTI--SILRGLKERYEVHHGVKITDSALV 374 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A LKME K ++E+++ + Q E Sbjct: 375 AAATLSNRYITDRFLPDKAID--LVD--EAAAKLKMEITSKPVELEDVDRRLMQLQMEKL 430 Query: 393 MFQLKA-------DEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLF 443 + + D++ +E S++ K L E ++ Sbjct: 431 SLEGEEERGMLVVDKSSKERLEKIQQEIKELEQIHEKLGSQWQSEKQMLEEINSLKEQEE 490 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 + E ++ D+D K E+ GL + +E Sbjct: 491 QLRHQIEQAERDYDLNKAAQLKYGELEGLQRQLEA 525 Score = 44.1 bits (103), Expect = 0.008 Identities = 36/233 (15%), Positives = 71/233 (30%), Gaps = 41/233 (17%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFE---ALIKELDFVRKIFRG---------------- 254 C + L + K V + A F+ +D I RG Sbjct: 312 RCIGATTLDEYRKHVEKDPALERRFQQVYVKQPSVDDTISILRGLKERYEVHHGVKITDS 371 Query: 255 -------------SEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPS 301 ++ K DE KLK ++ + + + S Sbjct: 372 ALVAAATLSNRYITDRFLPDKAIDLVDEAAAKLKMEITSKPVELEDVDRRLMQLQMEKLS 431 Query: 302 LENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEE------KMRMFKKARSVLDACDRE 355 LE E ++ + E E +Q +++E + E+ + + + L + + Sbjct: 432 LEGEEERGMLVVDKSSKERLEKIQQEIKELEQIHEKLGSQWQSEKQMLEEINSLKEQEEQ 491 Query: 356 LEDKACAVTD---LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 L + L Q K ++E L+ + K+ + Q + + RE Sbjct: 492 LRHQIEQAERDYDLNKAAQLKYGELEGLQRQLEAKETQLIDIQAQGETLLREQ 544 >gi|68246595|gb|EAN28691.1| AAA ATPase, central region:Clp, N terminal [Magnetococcus sp. MC-1] Length = 903 Score = 154 bits (389), Expect = 6e-36 Identities = 38/268 (14%), Positives = 75/268 (27%), Gaps = 21/268 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS--- 276 E +K V + +I +D + I + + + Sbjct: 298 EFEERLKAVIKEVQEAQ--GKIILFIDEMHTIVGAGQSEGAMDAGNLLKPALARGDLHCV 355 Query: 277 ------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ + FQ PS+E ++ E+ V+ T Sbjct: 356 GATTLDEYRKHVEKDPALERRFQPVQVREPSVEATI--SILRGIKDKYELHHGVRITDAA 413 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R A D L D A ++ME K ++ L+ + Q E Sbjct: 414 IVAAATLAHRYISDRFLPDKAID--LVD--EAAARIRMEITSKPQVLDSLDRQILQLQIE 469 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFEELKA 448 + D A RE T ++ + RL + ++ L Sbjct: 470 QSALSKEKDSASRERLTKLEAELADLKENAHAMTIRWEQERLNIKQVGILKETLESTRLQ 529 Query: 449 QENSQCDFDPMKM--RMESEIRGLLKGM 474 E ++ + K + L + + Sbjct: 530 LEQAERSGNLEKAGELRYGTLPKLEQEL 557 >gi|57898943|emb|CAI44947.1| putative HSP100 protein [Phycomyces blakesleeanus] Length = 901 Score = 153 bits (388), Expect = 7e-36 Identities = 42/270 (15%), Positives = 85/270 (31%), Gaps = 21/270 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V + + E +I +D + + + ++ + + + I Sbjct: 254 EFEERLKAVLKEVKESE--EGIILFIDEIHTVLGAGKGEGSMDAANLLKPMLARGELRCI 311 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ FQ+ D PS+ ++ E V+ T + Sbjct: 312 GATTLTEYKVIEKDPAFERRFQKVDVGEPSVAATI--SILRGLKERYESYHGVKITDSAL 369 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 V A+ R A D L D+A A T +++ K +I+ LE + EA Sbjct: 370 VVAAQLSDRYITTRFLPDKAID--LIDEAGANTRVQL--DSKPEEIDVLERKHFQLEIEA 425 Query: 392 DMFQLKA-DEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + ++ +E +Y K RL E + +Q L E + Sbjct: 426 MALGKEKNNKDSQERLKVVKEEMAKIQEELKPLKLRYDMDKGRLDEIRDLKQKLDELKRK 485 Query: 449 QENSQCDFDPMKM--RMESEIRGLLKGMEM 476 ++ +D I + + + Sbjct: 486 AVEARNRYDLDSAADIEYYAIPDVEQRINA 515 >gi|42524440|ref|NP_969820.1| ATPase with chaperone activity, two ATP-binding domains [Bdellovibrio bacteriovorus HD100] Length = 855 Score = 153 bits (388), Expect = 8e-36 Identities = 28/251 (11%), Positives = 80/251 (31%), Gaps = 19/251 (7%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + + + + + + + I ++ + Sbjct: 267 GQIILFIDELHTLVGAGKTEGAMDAGQLLKPALARGELRCIGATTLDEYRKYIEKDAALE 326 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ + PS+E+ ++ E+ ++ T + + R Sbjct: 327 RRFQTVMVEEPSVED--AITILRGLKEKYEVHHGIRITDAALVSAVKLSHRYITNRFLPD 384 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D A + L +E + +++++E + + E + + + DE+ RE Sbjct: 385 KAID--LID--EAASKLGIETRSVPEEVDKIERELMQLRIEKEALKKEKDESARERLAVI 440 Query: 410 XXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQENSQCDFDPMKM--RMES 465 ++ + + ++ + + + A ++ + D K Sbjct: 441 DKEITELNAKNQLLREQWEFEKGGIEGIKKLKADIEDLKVAVAKAEREGDLGKAAELKYG 500 Query: 466 EIRGLLKGMEM 476 ++ K ++ Sbjct: 501 KLPEAEKKLKA 511 >gi|68989120|dbj|BAE06227.1| heat shock protein [Lycopersicon esculentum] Length = 980 Score = 153 bits (387), Expect = 9e-36 Identities = 37/267 (13%), Positives = 82/267 (30%), Gaps = 23/267 (8%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP--- 281 +K V + + +I +D + + ++ + + + I Sbjct: 342 LKAVLKEVTESE--GQIILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTL 399 Query: 282 ------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ + FQ+ D P++E+ ++ E+ V+ + + A Sbjct: 400 DEYRKYIEKDPALERRFQQVYVDQPTVEDTV--SILRGLRERYELHHGVRISDTALVDAA 457 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ 395 R A D L D A LKME K ++E+ V + E Sbjct: 458 ILSDRYISGRFLPDKAID--LVD--EAAAKLKMEITSKPTALDEINRAVLKLEMERLSLT 513 Query: 396 LKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYLFEELKAQE 450 D+A ++ T ++ RL +E + E++ E Sbjct: 514 NDTDKASKDRLNRLETELSLLKERQAELTEQWEHEKSVMTRLQSIKEEIDRVNLEIQQAE 573 Query: 451 NSQCDFDPMKMRMESEIRGLLKGMEMT 477 +++ + L + +E + Sbjct: 574 REYDLNRAAELK-YGSLNTLQRQLEAS 599 >gi|15639065|ref|NP_218511.1| ATP-dependent Clp protease subunit B (clpB) [Treponema pallidum subsp. pallidum str. Nichols] Length = 878 Score = 153 bits (386), Expect = 1e-35 Identities = 34/258 (13%), Positives = 74/258 (28%), Gaps = 19/258 (7%) Query: 230 QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLID 280 A +I +D + + + + + ++ Sbjct: 262 VIEAVQKSDGGVILFIDELHTLVGAGASEGSMDASNLLKPALARGELRSIGATTLNEYRK 321 Query: 281 PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMR 340 ++ + FQ+ P++E+ ++ E+ V+ + R Sbjct: 322 YIEKDAALERRFQQVYCVQPTVEDTIA--ILRGLQEKYEVHHGVRIKDEALVAATVLSDR 379 Query: 341 MFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 A D L D A + LKME + + +++++E + E ++D Sbjct: 380 YITNRFLPDKAID--LVD--EAASRLKMEIESQPVELDQVERKILQLNIEKASLLKESDP 435 Query: 401 ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ--CDFDP 458 A +E ++ + E RR E E + + D Sbjct: 436 ASKERLEKLEKELAGFLERRAAMQVQWQNEKGRIEESRRYKEELERLRIEETMFSREGDL 495 Query: 459 MKM--RMESEIRGLLKGM 474 K +I L K + Sbjct: 496 NKAAELRYGKIPELEKKI 513 >gi|72381856|ref|YP_291211.1| ATPase [Prochlorococcus marinus str. NATL2A] Length = 863 Score = 153 bits (386), Expect = 1e-35 Identities = 33/257 (12%), Positives = 83/257 (32%), Gaps = 22/257 (8%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V ++ + +I +D + + ++ + + + I Sbjct: 255 EFEERLKSVLKNVTDSE--GKIILFIDEIHTVVGAGASGGAMDASNLLKPMLARGELRCI 312 Query: 280 DPLD---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + FQ+ PS+++ ++ E+ V+ + Sbjct: 313 GATTINEHRENFEKDPALERRFQQILVKQPSVQDTI--SILRGLKERYEVHHGVRISDNA 370 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R + A D L D++ + LKME K +I+E++ + + E Sbjct: 371 LIAAAILSDRYIPERFLPDKAID--LIDES--ASRLKMEITSKPEEIDEIDRKIIQLEME 426 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-----ERRQYLFEE 445 + ++D + +E K+ + + S E E + + E Sbjct: 427 KLSLEGESDTSSKERLELITSELALLTKNQIEVNKKWKREKESIEEISTLKEEIEKVQLE 486 Query: 446 LKAQENSQCDFDPMKMR 462 ++ + + ++ Sbjct: 487 IEKAKRNYDLNRAAELE 503 >gi|48870729|ref|ZP_00323448.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pediococcus pentosaceus ATCC 25745] Length = 863 Score = 152 bits (385), Expect = 2e-35 Identities = 34/266 (12%), Positives = 83/266 (31%), Gaps = 20/266 (7%) Query: 224 FVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + I + ++ + + LI Sbjct: 257 FEERLKAVLKEVSKSDGQIILFIDEIHTIVGAGKTEGSMDAGNLLKPMLARGELHLIGAT 316 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS+E+ ++ EI V+ + Sbjct: 317 TLDEYRENIEKDKALERRFQRVLVKEPSIEDTI--SILRGLKERFEIHHGVRIHDNALVA 374 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D+A A +K+E ++++++ + Q E Sbjct: 375 AAKLSSRYITDRYLPDKAID--LIDEASA--KIKVEMNSNPTELDQVKRQLMRLQVEERA 430 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEELK-AQEN 451 + ++D + S++ + + ++ ++ K + Sbjct: 431 LKNESDAESVKRLKDLQKELSETKEEKVKLESRWSAQKEEIKKISDKKNELDKAKHDLQE 490 Query: 452 SQCDFDPMKM--RMESEIRGLLKGME 475 ++ +D + I L K +E Sbjct: 491 AESSYDLDQAAILQHGTIPALEKELE 516 >gi|68178655|ref|ZP_00551766.1| IMP dehydrogenase/GMP reductase:AAA ATPase, central region:Clp, N terminal [Desulfuromonas acetoxidans DSM 684] Length = 866 Score = 152 bits (384), Expect = 2e-35 Identities = 30/266 (11%), Positives = 81/266 (30%), Gaps = 20/266 (7%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + ++ +D + I + ++ + + Sbjct: 258 EFEERLKAVLNEIRSSDGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGA 317 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ P++E+ ++ E+ V+ + + Sbjct: 318 TTLDEYRSHIEKDAALERRFQPVMVTQPTVED--SISILRGLKERFEVHHGVKIQDQALV 375 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R + A D L D+ACA+ ++ E ++ V + E Sbjct: 376 AAATLSQRYISERFLPDKAID--LVDEACAM--VRTEIDSMPAAMDTAARRVMQLEIEEA 431 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQE 450 + D A +E + +++ K L + ++ R+ + + Sbjct: 432 ALVKEKDAASKERLKALQEELAEQKHIVDSFRAQWDVEKAGLQKIQQLREQIEQANLQLA 491 Query: 451 NSQCDFDP--MKMRMESEIRGLLKGM 474 ++ D+D + L + + Sbjct: 492 AAERDYDLNTAAEIRHGRLPQLEQQL 517 >gi|16331154|ref|NP_441882.1| ClpB protein [Synechocystis sp. PCC 6803] Length = 898 Score = 151 bits (382), Expect = 4e-35 Identities = 42/277 (15%), Positives = 90/277 (32%), Gaps = 31/277 (11%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGS--EDARGKKLFWKADELIEKLKSKLI 279 F + + +I +D V + E + ++ + + + I Sbjct: 256 EFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAGNLLKPMLARGELRCI 315 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ+ PS+++ ++ E+ V+ T Sbjct: 316 GATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTI--SILRGLKEKYEVHHGVKITDSA 373 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R + A D L D A LKME K ++E+++ + Q E Sbjct: 374 LVAAATLSHRYIQDRFLPDKAID--LVD--EAAARLKMEITSKPVELEDIDRRLMQLQME 429 Query: 391 ADMFQLK-------ADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEA---EER 438 + + AD++ +E + ++ K L E +E+ Sbjct: 430 KLSLEGEEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQWLSEKQMLEEINTLKEK 489 Query: 439 RQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 Q L +++ E + K++ E+ L +E Sbjct: 490 EQELRLQVEKAERATDWEKAAKIK-YGELEVLQHDIE 525 >gi|29570852|gb|AAO73810.2| heat shock protein CLPA [Paracoccidioides brasiliensis] Length = 926 Score = 151 bits (382), Expect = 4e-35 Identities = 37/255 (14%), Positives = 76/255 (29%), Gaps = 20/255 (7%) Query: 235 NWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLK---------SKLIDPLDA 284 E ++ +D + + GS G ++ + + + ++ Sbjct: 288 EESKETIVLFVDEIHLLMGAGSSGEGGMDAANLLKPMLARGQLHCIGATTLGEYRKYIEK 347 Query: 285 CNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKK 344 FQ+ P++ ++ E+ V + A R Sbjct: 348 DQAFERRFQQVLVKEPTVGETI--SILRGLKERYEVHHGVNILDGAIVSAANLASRYLTA 405 Query: 345 ARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R A D L D A +++ R+ + ++ LE R Q E + D A + Sbjct: 406 RRLPDSAVD--LID--EAAAAVRVTRESQPEALDTLERRARQLQIEIHALAREKDAASKA 461 Query: 405 AEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYL-FEELKAQENSQC-DFDPMK 460 KY K R + ++ + L ++K E ++ D Sbjct: 462 RLEAAKQEAANVNEELRPLREKYESEKQRSKDIQDAKIKLDLLKVKRDEATRSGDTQTAS 521 Query: 461 MRMESEIRGLLKGME 475 + I + K +E Sbjct: 522 DLIYYAIPDVEKRIE 536 >gi|50294636|ref|XP_449729.1| unnamed protein product [Candida glabrata] Length = 787 Score = 150 bits (379), Expect = 7e-35 Identities = 38/268 (14%), Positives = 90/268 (33%), Gaps = 20/268 (7%) Query: 223 GFVKDVFQHCAPNWDFEAL-IKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + + I +D V + + + + + I Sbjct: 168 EFEERLKKVLEDIDKADGKVIVFIDEVHMLLGLGKTDGSMDASNILKPKLARG-LRCISA 226 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ + PS+++ ++ E+ V+ T + Sbjct: 227 TTIDEFKIIEKDPALTRRFQPILLNEPSVQDTI--SILRGLKERYEVHHGVRITDTALVS 284 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D+ACAV L+++ + K +I+ L+ + Q E + Sbjct: 285 AAVLSNRYINDRFLPDKAID--LVDEACAV--LRLQHESKPDEIQRLDRAIMKIQIELES 340 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELK-AQEN 451 + + D E + T + + + E+ + + E+ + + Sbjct: 341 LKKETDPVSIERKEDLEKELERKNEELQRLTKIWEEEKAEIESIKNSKADLEKARIELDR 400 Query: 452 SQCDFDPMKM--RMESEIRGLLKGMEMT 477 Q + D K ++I L + ++++ Sbjct: 401 CQREGDYAKASELRYAKIPALEEKVKLS 428 >gi|24214579|ref|NP_712060.1| ATPase with chaperone activity, two ATP-binding domains [Leptospira interrogans serovar Lai str. 56601] Length = 860 Score = 150 bits (379), Expect = 7e-35 Identities = 31/257 (12%), Positives = 77/257 (29%), Gaps = 33/257 (12%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + + ++ + + + I ++ + Sbjct: 273 GEVILFIDEIHTLVGAGATEGALDASNMLKPMLARGELRCIGATTLKEYQKYIEKDAALE 332 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ PS+E ++ E+ ++ + A R Sbjct: 333 RRFQPVYVKEPSVEETVT--ILRGLKGRYELHHGIRILDSALIAAATLSNRYI------- 383 Query: 350 DACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 DR L DKA A + +++E +++ ++ + E + + + D A +E Sbjct: 384 --SDRFLPDKAVDLIDEASSKMRIEIDSMPEELDRANKRIQSLKIEREALKKEQDTASKE 441 Query: 405 AEXXXXXXXXXXXXXXXXYTSKYLKLRL------SEAEERRQYLFEELKAQENSQCDFDP 458 +++ + EE +Y E +A+ + + Sbjct: 442 RLKTLERDLSEQEQNFQTLKARWDLEKSKIGRLKQIKEEIEKYKNLEAEAERRG--EINR 499 Query: 459 MKMRMESEIRGLLKGME 475 + ++ L K +E Sbjct: 500 VAEIRYGKLVDLQKELE 516 Score = 67.6 bits (164), Expect = 7e-10 Identities = 48/268 (17%), Positives = 89/268 (33%), Gaps = 39/268 (14%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFE---ALIKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K + + A F+ ++ I RG + ++ Sbjct: 311 RCIGATTLKEYQKYIEKDAALERRFQPVYVKEPSVEETVTILRGLKG------RYELHHG 364 Query: 271 IEKLKSKLIDPLDACN-FILMFFQE----CDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 I L S LI N +I F D S + + + + + + +Q Sbjct: 365 IRILDSALIAAATLSNRYISDRFLPDKAVDLIDEASSKMRI--EIDSMPEELDRANKRIQ 422 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + E + +E+ K+ L +R+L ++ LK E I R Sbjct: 423 SLKIEREALKKEQDTASKER---LKTLERDLSEQEQNFQTLKARWDL------EKSKIGR 473 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 LKQ + ++ + K EA E +Y KL + ++ + EE Sbjct: 474 LKQIKEEIEKYKNLEAEAERR----------GEINRVAEIRYGKLV--DLQKELESANEE 521 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKG 473 LK QE++ E +I ++ Sbjct: 522 LKKQESASRLLKEE--VSEEDIANIVSR 547 >gi|68209799|ref|ZP_00561666.1| AAA ATPase, central region:Clp, N terminal [Methanococcoides burtonii DSM 6242] Length = 869 Score = 150 bits (379), Expect = 8e-35 Identities = 41/300 (13%), Positives = 81/300 (27%), Gaps = 55/300 (18%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V + A + +I +D + I ++ + + I Sbjct: 256 EFEERLKAVLKEVADSE--GQIILFIDELHTIVGAGATEGAMDAGNLLKPMLARGELHCI 313 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + F D P +EN ++ E+ V+ Sbjct: 314 GATTLDEYRKYIEKDAALERRFLPVLVDQPDVENTI--SILRGLKEKYEVHHGVRIKDTA 371 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R A D L D A ++ K +++E + + + E Sbjct: 372 LVAAAVLSNRYISDRFLPDKAID--LVD--EAAAKVRTAIDSKPSELDEADRKILQLEIE 427 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYL-------------------KLR 431 + + + D +E +K+ K++ Sbjct: 428 REALKKEKDAVSKERVADLEKELADIRAESDAMRAKWQSEKDTIANLGSLKQQIEDIKIQ 487 Query: 432 LSEAE------------------ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 L AE QY EE K + Q D + E +I ++ Sbjct: 488 LELAENSGDFELASKLKYGSLTPLEHQYKEEETK-LQEQQDDMLLKEEVWEEDIAQVVSQ 546 >gi|33240532|ref|NP_875474.1| ATPase with chaperone activity ATP-binding subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 864 Score = 149 bits (378), Expect = 1e-34 Identities = 30/268 (11%), Positives = 85/268 (31%), Gaps = 22/268 (8%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + + ++ + + + I Sbjct: 255 EFEERLKAVLKEVTSSQGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGA 314 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ PS+E+ ++ E+ V+ + + Sbjct: 315 TTINEHRQHIEKDPALERRFQQVLISEPSIEDTI--SILRGLKEKYEVHHGVRISDSALV 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R + A D L D++ + LKME K +++E++ + Q E Sbjct: 373 AAAVLSNRYISERYLPDKAID--LIDES--ASKLKMEITSKPEELDEIDRKIIQLQMEKL 428 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELK 447 + +++ A +E ++ + + LS +E + + +++ Sbjct: 429 SLKRESNLASQEKLNAIDNGLNELKSKQSSLNKQWQEEKESINTLSFLKEEIEKVQLQIE 488 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGME 475 + ++ + L ++ Sbjct: 489 QAKRDYDLNRAAELE-YGTLNSLQNKLK 515 >gi|50942423|ref|XP_480739.1| putative coiled-coil protein [Oryza sativa (japonica cultivar-group)] Length = 630 Score = 149 bits (376), Expect = 2e-34 Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 22/177 (12%) Query: 123 YKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDV----- 177 CRN+ACQ L + D +C C C IC K+D + W+ C Sbjct: 126 TAVCRNVACQATLNSGDA----------YCKRCSCCICHKYDENKDPSLWLVCSSDTPYS 175 Query: 178 ---CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAP 234 C CH CA++ K G G + ++ F+C+ C + L ++ Sbjct: 176 GYSCGTSCHLKCALKN--KKAGIFKNGCNKKSDGSFYCVWCGKMNWLMRNLRKQLAIARE 233 Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMF 291 + + L + L K+ +GSE R L + ++ L+ ++ LD + I Sbjct: 234 SRRVDVLCERLSLTHKMVKGSERYRE--LANIINSAVKILEKEVGCALDQVSAITGR 288 >gi|71363823|ref|ZP_00654425.1| AAA ATPase, central region:Clp, N terminal [Psychrobacter cryohalolentis K5] Length = 865 Score = 148 bits (373), Expect = 4e-34 Identities = 31/255 (12%), Positives = 75/255 (29%), Gaps = 23/255 (9%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + +I +D + + + + + + + ++ Sbjct: 264 SKQEGNVILFIDELHTLVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKD 323 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D P++E+ ++ E+ V + A R Sbjct: 324 AALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHGVDIQDSAIIAAARMSHRYITDR 381 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 + A D L D A + L+ME K + +L+S + + + ++ + + D + Sbjct: 382 KLPDKAID--LID--EAASRLRMEMDSKPESLGKLDSRLIQLKMQREVLKNEEDAGAQAE 437 Query: 406 EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC------DFDPM 459 + + + Q L +EL + D++ M Sbjct: 438 RKVLDAQIEELEKEYADLNEIWQAEKA--LVKGSQQLKDELDKARIAYDKASREGDYEIM 495 Query: 460 KMRMESEIRGLLKGM 474 I L + + Sbjct: 496 SKLQYETIPQLERRI 510 >gi|56750897|ref|YP_171598.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Synechococcus elongatus PCC 6301] Length = 895 Score = 148 bits (373), Expect = 4e-34 Identities = 42/249 (16%), Positives = 85/249 (34%), Gaps = 25/249 (10%) Query: 239 EALIKELDFVRKIFRGSEDARG--KKLFWKADELIEKLKSKLIDP---------LDACNF 287 ++ +D + + +G ++ + + + I ++ Sbjct: 275 GQMVLFIDELHTVVGAGAGQQGSAMDAGNLLKPMLARGELRCIGATTTDEYRRTIEKDPA 334 Query: 288 ILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARS 347 + FQ+ PS+E+ ++ E V+ T + A+ R Sbjct: 335 LERRFQQVYVSQPSVEDTIA--ILRGLKERYEGHHGVKITDGALMAAAKLSHRYISDRFL 392 Query: 348 VLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEX 407 A D L D+A A LKME K ++E+LE + + E + +A ++ Sbjct: 393 PDKAID--LIDEASA--QLKMEITSKPSELEDLERRLLQLEMEQLSLSGENGQASVHSD- 447 Query: 408 XXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEI 467 T + + RL++ ++ + L EEL + + + E E Sbjct: 448 ------RLQQIQTELQTLQEQQARLNQQWQQEKQLLEELGRLQEEEETLRQQVNQAERE- 500 Query: 468 RGLLKGMEM 476 L KG E+ Sbjct: 501 HDLNKGAEL 509 >gi|17979454|gb|AAL50064.1| At2g25140/F13D4.100 [Arabidopsis thaliana] Length = 964 Score = 148 bits (373), Expect = 4e-34 Identities = 34/267 (12%), Positives = 81/267 (30%), Gaps = 22/267 (8%) Query: 224 FVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + I +D + + ++ + + + I Sbjct: 336 FEERLKAVMKEVSASNGQTILFIDEIHTVVGAGAMDGAMDASNLLKPMLGRGELRCIGAT 395 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ+ PS+E+ ++ E+ V + + Sbjct: 396 TLTEYRKYIEKDPALERRFQQVLCVQPSVEDTI--SILRGLRERYELHHGVTISDSALVS 453 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R + A D L D A LKME K +++ ++ V + E Sbjct: 454 AAVLADRYITERFLPDKAID--LVD--EAGAKLKMEITSKPTELDGIDRAVIKLEMEKLS 509 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYLFEELKA 448 + D+A +E ++ K ++ +E + E+++ Sbjct: 510 LKNDTDKASKERLQKIENDLSTLKQKQKELNVQWEKEKSLMTKIRSFKEEIDRVNLEIES 569 Query: 449 QENSQCDFDPMKMRMESEIRGLLKGME 475 E +++ + L + +E Sbjct: 570 AEREYDLNRAAELK-YGTLLSLQRQLE 595 Score = 44.8 bits (105), Expect = 0.004 Identities = 30/209 (14%), Positives = 66/209 (31%), Gaps = 40/209 (19%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFE---ALIKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K + + A F+ + ++ I RG + ++ Sbjct: 390 RCIGATTLTEYRKYIEKDPALERRFQQVLCVQPSVEDTISILRGLRE------RYELHHG 443 Query: 271 IEKLKSKLIDPLD-ACNFILMFFQE----CDSDS------------PSLENGEGGFLIAP 313 + S L+ A +I F D P+ +G +I Sbjct: 444 VTISDSALVSAAVLADRYITERFLPDKAIDLVDEAGAKLKMEITSKPTELDGIDRAVIKL 503 Query: 314 QDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKK 373 + + DT + ++E+++ + S L +EL + L + + Sbjct: 504 EMEKLSL---KNDTDKA----SKERLQKIENDLSTLKQKQKELNVQWEKEKSLMTKIRSF 556 Query: 374 KPQIEELESIVRLKQAEADMFQLKADEAR 402 K +I+ + E + + + D R Sbjct: 557 KEEIDRV-------NLEIESAEREYDLNR 578 >gi|33861137|ref|NP_892698.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 860 Score = 148 bits (373), Expect = 4e-34 Identities = 38/255 (14%), Positives = 81/255 (31%), Gaps = 23/255 (9%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K+V + + +I +D + + ++ + + + I Sbjct: 252 EFEERIKNVLKKVKSSE--GKIILFIDEIHTVVGAGATGGSLDASNLLKPMLARGELRCI 309 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ+ ++PS+++ ++ E+ V+ + Sbjct: 310 GATTINEHKQNIEKDPALERRFQKIKINAPSVDDTI--SILRGLREKYEVHHSVRISDNA 367 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R A D L D A + L M K +I+E++ V + E Sbjct: 368 LVAAASLSERYINDRFLPDKAID--LID--EAASRLNMIITSKPEEIDEIDRKVLQLEME 423 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK--- 447 Q ++D E ++ K + E L EE++ Sbjct: 424 NLSLQRESDNFSLERLKRINNELHDLKIRQSELNHQWQKEKEEIDE--ISNLKEEIESTQ 481 Query: 448 -AQENSQCDFDPMKM 461 E ++ FD K Sbjct: 482 LKIEQAKRSFDLNKA 496 >gi|8778731|gb|AAF79739.1| T25N20.6 [Arabidopsis thaliana] Length = 481 Score = 147 bits (372), Expect = 5e-34 Identities = 63/297 (21%), Positives = 108/297 (36%), Gaps = 37/297 (12%) Query: 122 LYKRCRNI--ACQN-LLPADDCDCDICSNKKGFCNLCMCVICSKFDF-ASNTCRWIGCD- 176 ++CR++ C+ LP CDIC ++ FC C C++C K +I C+ Sbjct: 176 GNEKCRSLMPQCEAETLP--AMPCDICCGERKFCVDCCCILCCKLISLEHGGYSYIKCEA 233 Query: 177 ------VCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQ 230 +C H H +CA+R + + G+ G + ++C C+ +LF V + Sbjct: 234 VVSEGHICGHVAHMNCALRA---YLAGTIGGSMG-LDTEYYCRRCDAKKDLFPHVNKFLE 289 Query: 231 HCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEK----LKSKLIDP-LDAC 285 C + K L+ I RG++ K+L + + K L D Sbjct: 290 ICQTVEYQGDVEKILNLGICILRGAQRDNAKELLNCIESTVIKIIFILVVDYSDSGEARE 349 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 N L Q+ P N E EI EV++ + E + Sbjct: 350 NDTLQSLQDVTPIGPIPFNHEAE----MHKLEEEIGEVLRALRKAQEFEYQIAEGKLHAQ 405 Query: 346 RSVLDACDRELEDKACAVTD---------LKMERQKKKPQIEELESIVRLKQAEADM 393 + L R+LE + ++ L K+ QI + + +LK+ E Sbjct: 406 KECLSDLYRQLEKEKSELSRRVSGTDANSLMTNVLKRLDQIRK--EVTKLKEMEEVA 460 >gi|57222826|gb|AAW40870.1| heat shock protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 898 Score = 147 bits (371), Expect = 7e-34 Identities = 41/270 (15%), Positives = 90/270 (33%), Gaps = 27/270 (10%) Query: 225 VKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK-------- 275 VK V + D +I +D + I G + + G ++ + K Sbjct: 267 VKAVLSEVEKSGDEGTQIILFIDEIHLIMAGKDSSGGMDAANLLKPMLARGKLKVIGATT 326 Query: 276 -SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + ++ + F + D PS+ + ++ E V+ + + Sbjct: 327 LNEYREYIEKDSAFERRFAQVIVDEPSVPDTVA--IMRGIREKYETHHGVRIMDSALVLA 384 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A+ + R A D L D A + +K+ R+ + I+ELE + E Sbjct: 385 AQLAKQYLTARRLPDSAID--LLD--EAASAVKVARETRPEAIDELERKKLGLEVEIHAL 440 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQENS 452 + + DEA +E +Y + + E R+ + E + + Sbjct: 441 EREKDEASKERLEVAKKAIADLEDKLGPLKREYENDKHLGDQIHELRRKIDELRTKADEA 500 Query: 453 QCDFDPMKM---------RMESEIRGLLKG 473 + +D + E +++ L + Sbjct: 501 ERRYDLATAADIRYHSIPQREQKLQELEQK 530 >gi|40804910|gb|AAR91717.1| vernalization insensitive 3 [Arabidopsis thaliana] Length = 600 Score = 147 bits (371), Expect = 7e-34 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 18/154 (11%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTD 185 C N+AC+ L DD FC C C IC KFD + W+ CD C CH + Sbjct: 110 CENLACRAALGCDDT----------FCRRCSCCICQKFDDNKDPSLWLTCDACGSSCHLE 159 Query: 186 CAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKEL 245 C +++ +G + F+C C ++L G + + + L L Sbjct: 160 CGLKQDRYGIGS------DDLDGRFYCAYCGKDNDLLGCWRKQVKVAKETRRVDVLCYRL 213 Query: 246 DFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 +K+ RG+ R L DE ++KL+ + Sbjct: 214 SLGQKLLRGTTKYR--NLLELMDEAVKKLEGDVG 245 >gi|33944507|ref|XP_340401.1| mitochondrial heat shock protein 78, putative [Trypanosoma brucei] Length = 812 Score = 146 bits (368), Expect = 1e-33 Identities = 33/259 (12%), Positives = 76/259 (29%), Gaps = 24/259 (9%) Query: 234 PNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP---------LD 283 +I +D + + G+ + + + + ++ Sbjct: 201 TIESQGKVILFIDELHTLVGAGASGDGSMDAANLLKPSLARGELHCVGATTLDEYKRHIE 260 Query: 284 ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFK 343 + FQ P++E ++ E + A R Sbjct: 261 KDAALARRFQSVLVTEPTVEETI--SVLRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLS 318 Query: 344 KARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 + R A D L D A + L+++++ K Q++ + + + EA+ + DE + Sbjct: 319 ERRLPDKAID--LID--EAASRLRLQQESKPEQLDSVGRELVRLKIEAEAVKKDKDELGK 374 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ----ENSQCDFDPM 459 ++ K + R + E+L E ++ + D Sbjct: 375 AKLTQLYNRIEERQKEYDALEERWKKEKAMFD--RIKKRTEDLDVLRHHYEQARTEGDFA 432 Query: 460 KM--RMESEIRGLLKGMEM 476 K + I L K ++ Sbjct: 433 KASEILHGRIPALKKEIDA 451 >gi|71661302|ref|XP_817674.1| ATP-dependent Clp protease subunit, heat shock protein 78, putative [Trypanosoma cruzi] Length = 802 Score = 146 bits (368), Expect = 2e-33 Identities = 35/259 (13%), Positives = 77/259 (29%), Gaps = 24/259 (9%) Query: 234 PNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKS---------KLIDPLD 283 +I +D + + G+ + + + + ++ Sbjct: 191 TIEAQGKIILFIDELHTLVGAGASGDGSMDAANLLKPSLARGELHCVGATTLDEYRRHIE 250 Query: 284 ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFK 343 + FQ P++E ++ E + A R Sbjct: 251 KDAALARRFQSVLVTEPTVEETI--SVLRGIKEKYEAHHGCLIKDEALVYAAVNSHRYLS 308 Query: 344 KARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR 403 R A D L D A + L+++++ K Q++ +E + + E + + DE + Sbjct: 309 DRRLPDKAID--LID--EAASRLRLQQESKPEQLDSVERELVRLKIEVEAVKKDKDELGK 364 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ----ENSQCDFDPM 459 +++ K + ER + E+L E ++ + D Sbjct: 365 AKLEHLYARIAERQDEYDALEARWKKEKAMF--ERIKQRTEDLDVLRHQYEQARTEGDFA 422 Query: 460 KM--RMESEIRGLLKGMEM 476 K + I L K +E Sbjct: 423 KASEILHGRIPTLKKEIEA 441 >gi|71401304|ref|XP_803323.1| ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100), putative [Trypanosoma cruzi] Length = 603 Score = 145 bits (367), Expect = 2e-33 Identities = 36/249 (14%), Positives = 80/249 (32%), Gaps = 20/249 (8%) Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFILMF 291 +I +D + + + ++ + + + ++ Sbjct: 272 IILFIDEMHVVLGAGKSEGAMDAANLLKPMLARGELRTIGATTLEEYRKYVEKDAAFERR 331 Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 F PS++ E ++ E VQ T + V + R A Sbjct: 332 FMPVYVTEPSVD--ECISILRGLKERYETHHGVQITDNAVVVAVQLADRYITGRFMPDKA 389 Query: 352 CDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL-KADEARREAEXXXX 410 D L D+ACA +++ + +I++LE R + EA + K +++ +E Sbjct: 390 ID--LIDEACANVRVQL--SSRPEEIDQLERKKRQLEIEAKALERDKKEKSSQERLRIVK 445 Query: 411 XXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQ--CDFDPMKMRMESE 466 ++Y + R+ E E + L E+ E ++ D + + Sbjct: 446 GDIQRVEELLQPLLARYNEERQRVDELHEMQTRLDEKKTKLERAERMRDMELAADLKYNA 505 Query: 467 IRGLLKGME 475 I + + Sbjct: 506 IPVIQDRIR 514 >gi|53712497|ref|YP_098489.1| endopeptidase Clp ATP-binding chain B [Bacteroides fragilis YCH46] Length = 862 Score = 145 bits (367), Expect = 2e-33 Identities = 37/275 (13%), Positives = 78/275 (28%), Gaps = 35/275 (12%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + + I Sbjct: 252 EFEERLKSVVNEVKKSEGNIILFIDEIHTLVGAGKGEGAMDAANILKPALARGELRSIGA 311 Query: 282 LD---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + FQ D P +N ++ E V+ + Sbjct: 312 TTLDEYQKYFEKDKALERRFQIVQVDEP--DNLSTISILRGLKERYENHHHVRIKDDAII 369 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 E R DR L DKA A L+ME ++E+ ++ Sbjct: 370 AAVELSSRYI---------TDRFLPDKAIDLMDEAAAKLRMEVDSVPEGLDEISRKIKQL 420 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYL 442 + E + + + DE + Y +K+ + + + + + L Sbjct: 421 EIEREAIKRENDEPK---LQTIGKELAELKEQEKSYKAKWQSEKSLMDIIQQNKVEIENL 477 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 E E ++R +++ L K +E T Sbjct: 478 KFEADKAEREGNYGKVAEIR-YGKLQELHKEIEDT 511 >gi|49655876|emb|CAG88481.1| unnamed protein product [Debaryomyces hansenii CBS767] Length = 801 Score = 145 bits (366), Expect = 3e-33 Identities = 33/267 (12%), Positives = 86/267 (32%), Gaps = 23/267 (8%) Query: 227 DVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------S 276 + Q +I +D + + + + + K Sbjct: 189 KLKQILKEVEEKQGKVILFIDELHILMGLGKAEGSIDASNLLKPALARGKLSLCGATTIE 248 Query: 277 KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE 336 + ++ + F + P++++ ++ E+ V+ T + A Sbjct: 249 EYRKYVEKDAALARRFSAVTVNEPTVQDTI--SILRGLKERYEVHHGVRITDGALVTSAL 306 Query: 337 EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL 396 R A D L D+AC + L+++ + K I +L+ + Q E + + Sbjct: 307 YSSRYITDRFLPDKAID--LVDEAC--STLRLQHESKPDAIAQLDRQIMTIQIELESLRK 362 Query: 397 KADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-RLSEAEERRQYLFEE----LKAQEN 451 + D+ + + +T K+ +L + + + E+ L+ + Sbjct: 363 EDDQLSLDRKTKLEEELNVKSAELKDFTEKWESEKKLIDDVKNAKTDLEQAKFDLEQCQR 422 Query: 452 SQCDFDPMKMRMESEIRGLLKGM-EMT 477 +++ + I L + + E+T Sbjct: 423 EGNYGKASELQ-YATIPKLEEQLKELT 448 >gi|48855282|ref|ZP_00309441.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Cytophaga hutchinsonii] Length = 871 Score = 145 bits (366), Expect = 3e-33 Identities = 33/268 (12%), Positives = 85/268 (31%), Gaps = 27/268 (10%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + D + ++ +D + + + + + Sbjct: 252 EFEERLKSVIKEVIDSDGEIVLFIDEIHTLIGAGGGEGAMDAANLLKPALARGELHAIGA 311 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ D P+ ++ ++ E+ ++ + Sbjct: 312 TTLKEYQKYIEKDKALERRFQAVIVDEPNTQD--AISILRGIKEKYEVHHGIRIQDDAII 369 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 E R A D L D+A A L++E +++E+ + + E + Sbjct: 370 AAVELSQRYISDRYLPDKAID--LMDEASA--KLRIELDSMPQELDEILRRIMQLEIERE 425 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEER-RQYLFEEL 446 + + + +E E +K+ + + L +A+E +Y E Sbjct: 426 AIRRENN---KEKETILSRELAELNEQKSQIMAKWQEEKRVIDGLKQAKEDIDRYKMEAE 482 Query: 447 KAQENSQCDFDPMKMRMESEIRGLLKGM 474 +A+ N D+ + +I+ K + Sbjct: 483 QAERNG--DYGKVAEIRYGKIQESEKQL 508 >gi|15425870|gb|AAK97626.1| heat shock protein 78 [Candida albicans] Length = 812 Score = 145 bits (366), Expect = 3e-33 Identities = 30/269 (11%), Positives = 79/269 (29%), Gaps = 21/269 (7%) Query: 224 FVKDVFQHCAPNWDFEAL-IKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + I +D + + + + K Sbjct: 182 FESKLKSILKEVEEKNGKVILFIDEFHLLMGLGKAEGSIDASNLLKPALARGKLSMCGAT 241 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + F + P+ E+ ++ E+ V+ + Sbjct: 242 TIEEYRKYVEKDAALARRFSPVTVNEPTGEDTI--SILRGLKERYEVHHGVRIMDSALVT 299 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A + L+++ + + I L+ + + E + Sbjct: 300 AALYSNRYITDRFLPDKAID--LVD--EASSTLRLQHESRPDAIATLDRQIMTIEIELES 355 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEELK-AQEN 451 + + D+ + + T ++ + + +A + + E+ K E Sbjct: 356 LRKEEDQLSIDRKHKLEKELEVKKSELKELTDQWESEKRAIDAVKNAKSELEKAKYELEQ 415 Query: 452 SQCDFDPMKM--RMESEIRGLLKGM-EMT 477 + + D + + I L + E++ Sbjct: 416 ATREGDYARASRIQYASIPELQDKIQELS 444 >gi|23128140|ref|ZP_00109994.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc punctiforme PCC 73102] Length = 879 Score = 144 bits (365), Expect = 4e-33 Identities = 37/271 (13%), Positives = 79/271 (29%), Gaps = 23/271 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLID 280 F + + D ++ +D + + GS ++ + + + I Sbjct: 256 EFEERLKAVLKEVMDSNGQIVLFIDELHTVVGTGSSQQGAMDAGNLLKPMLARGELRCIG 315 Query: 281 P---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + FQ+ D PS+EN ++ E+ V+ + + Sbjct: 316 ATTLDEFRKHIEKDAALERRFQQVFVDQPSVENTI--SILRGLKERYEVHHNVKISDSAL 373 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 A R A D L D A LKME K ++E ++ + + E Sbjct: 374 VAAATLSARYISDRFLPDKAID--LVD--EAAAQLKMEITSKPAELETIDRRLMQLEMEK 429 Query: 392 DMFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELK 447 + +E + ++ K L ++ Sbjct: 430 LSLAGEEKGTPQTKERLERIEQEIANLTEKQQIFNEQWQGEKQILEAISALKKEEDALRV 489 Query: 448 AQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E ++ +D K ++ G+ E Sbjct: 490 QIEQAERAYDLNKAAQLKYGKLEGVQHEREA 520 >gi|17131414|dbj|BAB74021.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120] Length = 880 Score = 144 bits (365), Expect = 4e-33 Identities = 34/253 (13%), Positives = 80/253 (31%), Gaps = 24/253 (9%) Query: 241 LIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFILM 290 ++ +D + + GS ++ + + + I ++ + Sbjct: 275 IVLFIDELHTVVGTGSNQQGAMDAGNLLKPMLARGELRCIGATTLDEFRKFIEKDAALER 334 Query: 291 FFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLD 350 FQ+ D PS+EN ++ E+ V+ + + A R Sbjct: 335 RFQQVYVDQPSVENTI--SILRGLKERYEVHHNVKISDSALVAAATLSARYIADRFLPDK 392 Query: 351 ACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR--REAEXX 408 A D L D A LKME K +E ++ + + E + A +E Sbjct: 393 AID--LVD--EAAAQLKMEITSKPADLEAIDRRLMQLEMEKLSLAGEEKVAAPTKERLQR 448 Query: 409 XXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELKAQENSQCDFDPMKMRM 463 +++ + +S ++ L +++ E + +++ Sbjct: 449 IELEITNLTEKQQDLNNQWQGEKQVLEAISLLKKEEDALRVQIEQAERAYDLNKAAQLK- 507 Query: 464 ESEIRGLLKGMEM 476 ++ G+ + E Sbjct: 508 YGKLEGVQRDREA 520 >gi|67940377|ref|ZP_00532807.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chlorobium phaeobacteroides BS1] Length = 863 Score = 144 bits (364), Expect = 5e-33 Identities = 33/268 (12%), Positives = 78/268 (29%), Gaps = 23/268 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D + +I +D + + + + + + + I Sbjct: 252 EFEERLKSVVKEVIDSDGEIILFIDEIHTLVGAGKSEGAMDAANILKPALARGELRAIGA 311 Query: 282 LD---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + FQ + P + ++ E V+ + Sbjct: 312 TTLKEYQKFFEKDKALERRFQIVMVNEP--DTLSAVSILRGLKERYESHHKVRIKDEAIV 369 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 E R A D L D A + LK+E ++E +E VR + E + Sbjct: 370 AAVELSQRYITDRFLPDKAID--LID--EAASKLKLEINSLPEELEIVERRVRQLEIERE 425 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-LSEAEERRQYLFEELKA-QE 450 + + D+ + +++ + L + + ++ E LK E Sbjct: 426 AIKREHDQLK---LDVISQELANLNEIRTDLRARWQAEKDLVDKIQMKKADIETLKLDAE 482 Query: 451 NSQCDFD--PMKMRMESEIRGLLKGMEM 476 ++ + D + +++ E Sbjct: 483 RAEREGDYGRVAEIRYGKLQQAEADTEA 510 >gi|29341916|gb|AAO79702.1| endopeptidase Clp ATP-binding chain B [Bacteroides thetaiotaomicron VPI-5482] Length = 862 Score = 143 bits (362), Expect = 8e-33 Identities = 36/272 (13%), Positives = 80/272 (29%), Gaps = 29/272 (10%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + + I Sbjct: 252 EFEERLKSVVNEVKKSEGDIILFIDEIHTLVGAGKGEGAMDAANILKPALARGELRSIGA 311 Query: 282 LD---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + FQ D P + ++ E V+ + Sbjct: 312 TTLDEYQKYFEKDKALERRFQIVQVDEPDTLSTI--SILRGLKERYENHHHVRIKDDAII 369 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 E R DR L DKA A L+ME +++E+ ++ Sbjct: 370 AAVELSSRYI---------TDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQL 420 Query: 388 QAEADMFQLKADEARREA--EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 + E + + + D+ + E + + K L ++ + + + L E Sbjct: 421 EIEREAIKRENDKPKLEIIGKELAELKEVEKSFKAKWQSEKTLMDKIQQNKVEIENLKFE 480 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 + E ++R +++ L K +E T Sbjct: 481 AEKAEREGDYGKVAEIR-YGKLQALDKEIEDT 511 >gi|34540850|ref|NP_905329.1| clpB protein [Porphyromonas gingivalis W83] Length = 863 Score = 143 bits (362), Expect = 9e-33 Identities = 31/259 (11%), Positives = 77/259 (29%), Gaps = 33/259 (12%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + + I Sbjct: 252 EFEERLKAVVNEVTGAEGEIILFIDEIHTLVGAGKSEGAMDAANILKPALARGELRAIGA 311 Query: 282 LD---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + FQ D P + ++ E V+ + Sbjct: 312 TTLDEYRKYFEKDKALERRFQMVMVDEP--DELSSISILRGLKEKYENHHKVRIKDDAII 369 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A D L D A L+ME +++E+ ++ + E + Sbjct: 370 AAVKLSHRYITERFLPDKAID--LMD--EAAARLRMEVDSLPEELDEISRRIKQLEIERE 425 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENS 452 + + DE + + + +L+ EA E+ Q+ E+ + + Sbjct: 426 AIKRENDEEKVQ-----------------FLDREIAELKEKEASEKAQWQNEKDRINQIQ 468 Query: 453 QCDFDPMKMRMESEIRGLL 471 Q D +++ +++ Sbjct: 469 QLKIDIEELKFQADRAERE 487 >gi|47568371|ref|ZP_00239072.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus cereus G9241] Length = 866 Score = 143 bits (361), Expect = 9e-33 Identities = 26/219 (11%), Positives = 65/219 (29%), Gaps = 16/219 (7%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + I + ++ + + I Sbjct: 257 EFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGA 316 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ ++ P++E+ ++ EI V R + Sbjct: 317 TTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTI--SILRGLKERFEIYHGVNIHDRAIV 374 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + D L D+ACA ++ E +++E+ + + E Sbjct: 375 AASVLSDRYISDRFLPDKSID--LVDEACA--TIRTEIDSMPTELDEVTRRIMQLEIEEA 430 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR 431 + D +E +K+ K + Sbjct: 431 ALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEK 469 >gi|65303851|emb|CAI76228.1| ClpB protein, putative [Theileria annulata] Length = 1150 Score = 143 bits (361), Expect = 1e-32 Identities = 31/282 (10%), Positives = 78/282 (27%), Gaps = 36/282 (12%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + + ++ +D + + E ++ + + Sbjct: 400 EFEERLKEILNEIENSQGEIVMFIDEIHTLVGAGESQGSLDAGNILKPMLARGELRCIGA 459 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ D P++E ++ E+ V+ + Sbjct: 460 TTLQEYRQKIEKDKALERRFQPIYIDEPNIEETI--NILRGLKERYEVHHGVRILDSTLI 517 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R A D L D A LK++ K Q++ +E + + E Sbjct: 518 QAVLLSNRYITDRYLPDKAID--LID--EAAAKLKIQLSSKPLQLDIIERKLLQLEMEKI 573 Query: 393 MF-----------QLKADEAR---REAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LS 433 + + + + + +LK + + Sbjct: 574 SIINDNDNIGILSKNEKENLKPNDKLRLQNIDNLVNELTKQKDELNEMWLKEKSLVDNIR 633 Query: 434 EAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 +ER + E+ E ++R E+ + L ++ Sbjct: 634 NIKERIDIVKIEIDKAERDFDLNHAAELRFET-LPDLENQLK 674 >gi|67919330|ref|ZP_00512911.1| AAA ATPase, central region:Clp, N terminal [Chlorobium limicola DSM 245] Length = 441 Score = 143 bits (361), Expect = 1e-32 Identities = 26/185 (14%), Positives = 57/185 (30%), Gaps = 16/185 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + + + + + + I Sbjct: 257 EFEERLKAVVKEVQSADGEIILFIDEIHLLVGAGSAEGSMDAANILKPALARGELRCIGA 316 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D PS+E+ ++ EI V+ + Sbjct: 317 TTLDEYRKHIEKDAALERRFQTVLVDQPSVEDTV--SILRGLKEKYEIHHGVRIKDAALV 374 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D A + L++E +++ L +R + E + Sbjct: 375 AAAELSNRYISDRFLPDKAID--LID--EASSRLRLEIDSSPEELDRLNREIRRLEIERE 430 Query: 393 MFQLK 397 + + Sbjct: 431 ALKRE 435 >gi|71482382|ref|ZP_00662075.1| AAA ATPase, central region:Clp, N terminal [Prosthecochloris vibrioformis DSM 265] Length = 442 Score = 142 bits (359), Expect = 2e-32 Identities = 28/190 (14%), Positives = 57/190 (30%), Gaps = 16/190 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + D +I +D + + + + + + I Sbjct: 257 EFEDRLKAVVREVQDSNGEVILFIDELHLLVGAGSAEGSMDAANILKPALARGELRCIGA 316 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D PS+E+ ++ EI V+ + Sbjct: 317 TTLDEYRKHIEKDAALERRFQTVVVDQPSVEDTV--SILRGLKEKYEIHHGVRIKDSAIV 374 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D A + L++E +++ L +R + E + Sbjct: 375 AAAELSNRYIADRFLPDKAID--LID--EASSRLRLEIDSSPEELDRLNREIRRLEIERE 430 Query: 393 MFQLKADEAR 402 + + D Sbjct: 431 ALKRELDPGS 440 >gi|66850531|gb|EAL90858.1| ATP-dependent Clp protease, putative [Aspergillus fumigatus Af293] Length = 997 Score = 141 bits (357), Expect = 3e-32 Identities = 35/259 (13%), Positives = 77/259 (29%), Gaps = 23/259 (8%) Query: 235 NWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLK---------SKLIDPLDA 284 + ++ +D + + GS G ++ + + + ++ Sbjct: 358 EESKDTIVLFVDEIHLLMGAGSSGEGGMDAANLLKPMLARGQLHCIGATTLGEYRKYIEK 417 Query: 285 CNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKK 344 FQ+ P++ ++ E+ V + AE R Sbjct: 418 DQAFERRFQQVLVKEPTVSETI--SILRGLKEKYEVHHGVNILDGAIVAAAELAARYLTA 475 Query: 345 ARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R A D L D A +++ R+ + ++ LE +R Q E + + D+A + Sbjct: 476 RRLPDSAVD--LID--EAAAAVRVTRESEPEALDNLERRLRQLQIEIHALEREKDDASKA 531 Query: 405 AEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM- 461 KY K R ++ + L ++ ++ D Sbjct: 532 RLEAAKQEAANVTEELRPLREKYESEKQRSKAIQDAKIKLDSLKVKRDEAERSGDTQTAA 591 Query: 462 -RMESEIRG---LLKGMEM 476 I L++ +E Sbjct: 592 DLEYYAIPETKALIERLEA 610 >gi|67935560|ref|ZP_00528580.1| AAA ATPase, central region:Clp, N terminal [Chlorobium phaeobacteroides DSM 266] Length = 452 Score = 141 bits (356), Expect = 4e-32 Identities = 26/185 (14%), Positives = 56/185 (30%), Gaps = 16/185 (8%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + I Sbjct: 267 EFEERLKAVVKEVQSAAGEIILFIDEIHLLVGAGSAEGSMDAANILKPALARGELRCIGA 326 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D PS+E+ ++ EI V+ + Sbjct: 327 TTLDEYRKHIEKDAALERRFQTVLVDQPSVEDTV--SILRGLKEKYEIHHGVRIKDAALV 384 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D A + L++E +++ L +R + E + Sbjct: 385 AAAELSDRYIADRFLPDKAID--LID--EASSRLRLEIDSSPEELDRLNREIRRLEIERE 440 Query: 393 MFQLK 397 + + Sbjct: 441 ALKRE 445 >gi|21675087|ref|NP_663152.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Chlorobium tepidum TLS] Length = 442 Score = 141 bits (355), Expect = 5e-32 Identities = 26/188 (13%), Positives = 60/188 (31%), Gaps = 16/188 (8%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + I Sbjct: 257 EFEERLKALVKEVQASDGEVILFIDELHLLVGAGSAEGSMDAANILKPALARGELRCIGA 316 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D PS+E+ ++ EI V+ + Sbjct: 317 TTLDEYRKHIEKDAALERRFQTVIVDQPSVEDTV--SILRGLKEKYEIHHGVRIKDAALV 374 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D+AC + L++E + +++ + +R + E + Sbjct: 375 AAAELSNRYIADRFLPDKAID--LIDEAC--SRLRLEIDSEPEELDRINRELRRLEIERE 430 Query: 393 MFQLKADE 400 + + + Sbjct: 431 ALKRELEA 438 >gi|50555844|ref|XP_505330.1| hypothetical protein [Yarrowia lipolytica] Length = 782 Score = 140 bits (353), Expect = 8e-32 Identities = 30/200 (15%), Positives = 67/200 (33%), Gaps = 10/200 (5%) Query: 277 KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE 336 + ++ + FQ + PS+E+ ++ E+ V+ T + A Sbjct: 239 EYRKYIEKDAALARRFQSVMVNEPSVED--AISILRGLKERYEVHHGVRLTDAALVTAAV 296 Query: 337 EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL 396 R A D L D+AC+ L+++ + K +++ELE + E + + Sbjct: 297 YSNRYISDRFLPDKAID--LVDEACSA--LRLQHESKPDELQELERQTVTLEIELESLRE 352 Query: 397 KADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKAQENSQC 454 + D E T + + + + +E ++ L + ++ Sbjct: 353 EEDPLSVERRKKVEEKLEFKKGEIERLTKVWEDEKRAIDQIKETQKTLDGARTDLDTARR 412 Query: 455 DFDPMKM--RMESEIRGLLK 472 D +I L + Sbjct: 413 TGDFAAASKIQYQDIPELER 432 >gi|9294095|dbj|BAB01947.1| unnamed protein product [Arabidopsis thaliana] Length = 602 Score = 140 bits (353), Expect = 9e-32 Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 26/163 (15%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCD--------V 177 C+N +C+ +P + FC C C +C FD + W+ C+ Sbjct: 49 CKNASCRANVP----------KEDSFCKRCSCCVCHNFDENKDPSLWLVCEPEKSDDVEF 98 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWD 237 C CH +CA RE +K+G A G + F C +C S++ G K Sbjct: 99 CGLSCHIECAFRE--VKVGVIALGNLMKLDGCFCCYSCGKVSQILGCWKKQLVAAKEARR 156 Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 + L +D ++ G+ F + E++ KS L D Sbjct: 157 RDGLCYRIDLGYRLLNGTSR------FSELHEIVRAAKSMLED 193 >gi|32446255|emb|CAD76084.1| ClpB protein [Rhodopirellula baltica SH 1] Length = 899 Score = 139 bits (352), Expect = 1e-31 Identities = 31/270 (11%), Positives = 74/270 (27%), Gaps = 24/270 (8%) Query: 224 FVKDVFQHCAPNWDFEAL-IKELDFVRKIFRGSEDARGKKLFWKA--DELIEKLKS---- 276 F + + D + I +D + + + L+ Sbjct: 274 FEERLKSVLREVKDSDGKVILFIDELHLVVGAGNAEGSADAANLLKPELARGALRCIGAT 333 Query: 277 ---KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + FQ P++E+ ++ E V+ T + Sbjct: 334 TLDEYRQHIEKDAALERRFQPVFVGEPNVEDTVA--ILRGLKPRYESHHGVRITDSALVA 391 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A + L ME++ I+ L+ +R + Sbjct: 392 AANLSDRYIADRFLPDKAID--LID--EAASRLAMEKESVPEPIDRLQRRLRQLELVHRQ 447 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--------ERRQYLFEE 445 + + + + ++ ++ + ++ Q+ F + Sbjct: 448 LVDEQEASAVDKRVEVEEEMESAKAELASLKEQWETEKMGLDDVQSVRQEVDQLQHRFAQ 507 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKGME 475 L A + SE+ + + Sbjct: 508 LDADAKEKQLRGESPEDAYSEMLQVQSRLR 537 >gi|67517159|ref|XP_658462.1| hypothetical protein AN0858.2 [Aspergillus nidulans FGSC A4] Length = 927 Score = 139 bits (352), Expect = 1e-31 Identities = 39/270 (14%), Positives = 77/270 (28%), Gaps = 22/270 (8%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLK----- 275 F + + E ++ +D + + G+ G ++ + + Sbjct: 272 EFEERLKGVLKEIEESKETIVLFVDEIHLLMGAGASGEGGMDAANLLKPMLARGQLHCIG 331 Query: 276 ----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV-VQDTARK 330 + ++ FQ+ P++ ++ E+ V+ Sbjct: 332 ATTLGEYRKYIEKDAAFERRFQQVLVKEPTVSETI--SILRGLKEKYEVHHGSVRILDAA 389 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R R A D L D+A A + E + ++ LE R Q E Sbjct: 390 IVTAATLAARYLTARRLPDSAVD--LIDEAAAAVRVARE--SEPEALDNLERKHRQLQIE 445 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 + + DEA + KY K R ++ + L Sbjct: 446 IHALKREKDEASKARLQAAEQEAANVIEELRPMRQKYESEKQRNKAIQDAKTKLDNLKNK 505 Query: 449 QENSQCDFDPMKM--RMESEIRGLLKGMEM 476 QE ++ D I + +EM Sbjct: 506 QEEAERSGDTETAADLKYYAIPETQQHIEM 535 >gi|68553506|ref|ZP_00592879.1| AAA ATPase, central region:Clp, N terminal [Prosthecochloris aestuarii DSM 271] Length = 439 Score = 139 bits (351), Expect = 1e-31 Identities = 26/185 (14%), Positives = 56/185 (30%), Gaps = 16/185 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + D +I +D + + + + + + I Sbjct: 257 EFEDRLKAVVKEVQDANGEVILFIDELHLLVGAGSAEGAVDAANILKPALARGELRCIGA 316 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D PS+E+ ++ EI V+ + Sbjct: 317 TTLDEYRKYIEKDAALERRFQTVIVDQPSVEDTI--SILRGLKEKYEIHHGVRVKDSAIV 374 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D A + L++E +++ + +R + E + Sbjct: 375 AAAELSNRYISDRFLPDKAID--LID--EASSRLRLEIDSDPEELDRVNREIRRLEIERE 430 Query: 393 MFQLK 397 + + Sbjct: 431 ALKRE 435 >gi|28493713|ref|NP_787874.1| ATP-dependent protase ATP-binding subunit [Tropheryma whipplei str. Twist] Length = 705 Score = 139 bits (351), Expect = 2e-31 Identities = 34/262 (12%), Positives = 80/262 (30%), Gaps = 19/262 (7%) Query: 226 KDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---- 281 + ++ +I +D V + L+ + + +LI Sbjct: 109 EKRVKNLLEEIQKSKVIIFIDEVHTLMSAGAAEGAIAAGNMLKPLLARGELRLIGATTLD 168 Query: 282 -----LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE 336 L+ + FQ+ P+LE+ ++ E V + + E Sbjct: 169 EYREHLEKDPALERRFQQVFVGEPNLEDCIA--IMRGLKERYEAHHKVSISDTALVTAVE 226 Query: 337 EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL 396 R + A D L D A + L+ME ++++L V + E + Sbjct: 227 LSSRYITGRQLPDKAID--LLD--EAASSLRMEIDSSPVELDQLRREVDRLRLEELALKS 282 Query: 397 KADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQC 454 + D + + + + RL++ ++ + ++ + +Q Sbjct: 283 ENDPTSEQRLRSITNQLSGKQEMLNTLQASWNSERARLNQIGALKEQIDIAKQSADIAQR 342 Query: 455 DFDPMKM--RMESEIRGLLKGM 474 + + + I L K + Sbjct: 343 EGRLEDASRLLYATIPQLQKNL 364 >gi|68479564|ref|XP_716146.1| hypothetical protein CaO19_13747 [Candida albicans SC5314] Length = 899 Score = 139 bits (351), Expect = 2e-31 Identities = 37/272 (13%), Positives = 76/272 (27%), Gaps = 35/272 (12%) Query: 233 APNWDFEALIKELDFVRKIFRGSE--------------DARGKKLFWKADELIEKLKSKL 278 A + L V S+ ++ + Sbjct: 251 AGAKYKGEFEERLKGVLNEIEKSKEFIILFIDEIHMLMGDGKSDAANLLKPMLARGALHC 310 Query: 279 IDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTAR 329 I + FQ+ D + +++ ++ EI V+ Sbjct: 311 IGATTFAEYRKFISKDGAFERRFQKIDVPAATVQETVA--ILRGIQPKYEIHHGVRILDS 368 Query: 330 KMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQA 389 + A+ R A D L D++ A + + R K +++ LE + L Sbjct: 369 ALVTAAQLASRYLTYRALPDSAVD--LVDESAAA--VAVARDSKPEELDTLERQLHLVDV 424 Query: 390 EADMFQ--LKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEE 445 E + + AD A +E +Y + R S + ++ L E Sbjct: 425 EINALERDKDADSASKERLNLAKKKKAELEEKIGPLNERYRQERASHEQLTAAKRKLDEL 484 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 ++++ +D I + K +E Sbjct: 485 EIKAQDAERRYDTATAADLRYFAIPDIQKQIE 516 >gi|50365236|ref|YP_053661.1| ATPase subunit of ATP-dependant protease [Mesoplasma florum L1] Length = 711 Score = 139 bits (350), Expect = 2e-31 Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 10/213 (4%) Query: 266 KADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + + + ++ + + FQ + P+++ ++ E V+ Sbjct: 161 ELKAIGATTLKEYREYIEKDSALERRFQRVMVEEPTVDQTI--SILRGLKERFETYHGVR 218 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R A D L D A + +K E +++++ V Sbjct: 219 IHDNAIVSAANLSNRYIADRFLPDKAID--LID--EASSTIKTELASVPTELDQVNRKVM 274 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-QYLFE 444 + E + D+ +E S++ K + + + E Sbjct: 275 QLEIEKSALSKEKDDKSKERLAEAVKELEKTKIEQDKLASEWNKQKSQLEKINSFKTTIE 334 Query: 445 ELK-AQENSQCD--FDPMKMRMESEIRGLLKGM 474 LK E SQ + + S + L K + Sbjct: 335 NLKNELEISQNEGNYKRAGEIQYSLLPSLEKQL 367 >gi|39977113|ref|XP_369944.1| hypothetical protein MG06459.4 [Magnaporthe grisea 70-15] Length = 926 Score = 138 bits (349), Expect = 3e-31 Identities = 40/251 (15%), Positives = 74/251 (29%), Gaps = 39/251 (15%) Query: 235 NWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP---------LDA 284 E ++ +D + + GS G ++ + + I ++ Sbjct: 285 EEAKEMIVLFVDEIHLLMGAGSSGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEK 344 Query: 285 CNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKK 344 FQ+ P++ ++ E+ V + A R Sbjct: 345 DAAFERRFQQVLVKEPTINETI--SILRGLKEKYEVHHGVTIADSALVASANLAARYLTT 402 Query: 345 ARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R A D L D+A A + E + I+ LE +R + E + DEA + Sbjct: 403 RRMPDSAVD--LIDEAAAAVRVARE--SQPEIIDSLERKLRQLKIEIHALSREKDEASKG 458 Query: 405 AEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRME 464 K EE + L E+ +++ D KM+++ Sbjct: 459 RLA-------------------LAKQEAQNVEEELRPLREKYESERKRGKDIQEAKMKLD 499 Query: 465 SEIRGLLKGME 475 L ME Sbjct: 500 ----QLKVKME 506 >gi|67914654|gb|EAM63991.1| AAA ATPase, central region:Clp, N terminal [Chlorobium phaeobacteroides BS1] Length = 439 Score = 138 bits (349), Expect = 3e-31 Identities = 26/185 (14%), Positives = 58/185 (31%), Gaps = 16/185 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + D +I +D + + + + + + I Sbjct: 257 EFEDRLKAVVKEVQDANGEVILFIDEMHLLVGAGSAEGAVDAANILKPALARGELRCIGA 316 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D PS+E+ ++ EI V+ + Sbjct: 317 TTLDEYRKHIEKDAALERRFQTVIVDQPSVEDTV--SILRGLKEKYEIHHGVRILDSAII 374 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R + A D L D A + L++E +++++ +R + E + Sbjct: 375 AAAELSDRYISERFLPDKAID--LID--EASSRLRLEMDSDPEELDKVNREIRRLEIERE 430 Query: 393 MFQLK 397 + + Sbjct: 431 ALKRE 435 >gi|68175940|ref|ZP_00549169.1| AAA ATPase, central region:Clp, N terminal [Frankia sp. CcI3] Length = 880 Score = 138 bits (349), Expect = 3e-31 Identities = 36/269 (13%), Positives = 79/269 (29%), Gaps = 26/269 (9%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID- 280 F + + A ++ +D + + L+ + LI Sbjct: 263 AFEERLKAVMAQVTASEGRILLFVDELHAVLGAGAAEGKTDAGNVLKPLLIRGDLHLIGT 322 Query: 281 --------PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 +++ FQ + PS+ + ++ EI V+ + Sbjct: 323 TTLEEYRRQIESDPAFARRFQTVIINEPSVADTI--SILRGLRGRLEIFHGVRIADAALV 380 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D+A A+ L+ + ++E+ V + E Sbjct: 381 SAAVLSHRYISDRFLPDKAID--LVDEAGAM--LRTDIDSMPTGLDEITRRVVRLEIEEA 436 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA---- 448 ++D A +++ R +A R + L EE++ Sbjct: 437 ALAQESDPASIARLDQLRGELADVRAAANTMRARWEAER--QAIRRVRGLREEIEQARRR 494 Query: 449 ---QENSQCDFDPMKMRMESEIRGLLKGM 474 E + ++R + + L + + Sbjct: 495 AEDAERAHDLGTAAELR-HTRLPELDRRL 522 Score = 38.7 bits (89), Expect = 0.33 Identities = 22/177 (12%), Positives = 51/177 (28%), Gaps = 41/177 (23%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSL-ENGEGGFL-----IAPQ 314 K DE L++ + + I + + +L + + + + + Sbjct: 397 DKAIDLVDEAGAMLRTDIDSMPTGLDEITRRVVRLEIEEAALAQESDPASIARLDQLRGE 456 Query: 315 ---------------DACNEIAEVVQDTARKMEVV---AEEKMRM------FKKARSVLD 350 +A + V+ ++E AE+ R + + L Sbjct: 457 LADVRAAANTMRARWEAERQAIRRVRGLREEIEQARRRAEDAERAHDLGTAAELRHTRLP 516 Query: 351 ACDRELEDKACAV------TDLKMERQKKKPQIEELES-----IVRLKQAEADMFQL 396 DR L D++ + L E + + + RL + E + + Sbjct: 517 ELDRRLADESERLTPQRGGHRLLREMVTADEIADLVSRWTGIPVARLLEREREKLRR 573 >gi|22296180|dbj|BAC10004.1| endopeptidase Clp ATP-binding chain B [Thermosynechococcus elongatus BP-1] Length = 887 Score = 138 bits (348), Expect = 3e-31 Identities = 41/267 (15%), Positives = 81/267 (30%), Gaps = 36/267 (13%) Query: 237 DFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP---------LDACN 286 ++ +D + + G+ ++ + + + I ++ Sbjct: 270 SEGQIVLFIDELHTVVGAGANQNSSMDASNLLKPMLARGELRCIGATTLDEYRKYIEKDA 329 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR 346 + FQ+ PS+E+ ++ EI V+ T + A R Sbjct: 330 ALERRFQQVYIGQPSVEDTI--SILRGLKDRYEIHHNVKITDSALVAAAMLSDRYISDRY 387 Query: 347 SVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE------ 400 A D L D A LKME K ++E LE +R + E + + Sbjct: 388 LPDKAID--LVD--EAAAKLKMEITTKPAELEALERRLRQLEMERLSLKQEESLPLSQAP 443 Query: 401 --ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL------SEAEERRQYLFEELKAQENS 452 A R+ +++ + S EE Q + E + Sbjct: 444 LQATRDRLQRIEAEIAQLQPRQQAMQARWQAEKELLERINSLKEEEDQVKLQ----IEQA 499 Query: 453 QCDFDPMKM--RMESEIRGLLKGMEMT 477 + D++ K + L + +E T Sbjct: 500 ERDYNLNKAAQLKYGRLETLQRELEAT 526 >gi|44985843|gb|AAS54454.1| AGL036Cp [Ashbya gossypii ATCC 10895] Length = 904 Score = 138 bits (348), Expect = 4e-31 Identities = 46/277 (16%), Positives = 80/277 (28%), Gaps = 35/277 (12%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSE--------------DARGKKLFWKADELIE 272 D+ A + L V K S+ + Sbjct: 247 DLAALTAGAKYKGDFEERLKGVLKEIEESKTLIVLFIDEIHMLMGNGKDDAANIMKPALS 306 Query: 273 KLKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV 323 + + K+I ++ FQ+ D P++ ++ EI Sbjct: 307 RGQLKVIGATTNNEYRAIVEKDGAFERRFQKIDVAEPTVRQTIA--ILRGLQGKYEIHHG 364 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESI 383 V+ + A+ R R A D L D ACA + + R K +++ E Sbjct: 365 VRILDSALVSAAQLAKRYLPYRRLPDSAID--LVDIACAG--VAVARDSKPEELDSKERE 420 Query: 384 VRLKQAEADMF--QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY 441 ++L Q E + +D +E +Y + R S E + Sbjct: 421 LQLIQVEINALDRDKDSDPTTKERLMQAKQKEASLMEELEPLRQRYEEERRSHEELTKAK 480 Query: 442 -LFEEL--KAQENSQC-DFDPMKMRMESEIRGLLKGM 474 EEL KA + + D+ I L K + Sbjct: 481 AKLEELENKALDAERRHDYGTAADIRYFAIPDLRKRI 517 >gi|6967978|emb|CAB75146.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 857 Score = 138 bits (348), Expect = 4e-31 Identities = 34/267 (12%), Positives = 79/267 (29%), Gaps = 19/267 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + E +I +D + I + + + Sbjct: 255 EFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGAT 314 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + + + FQ + PS+ E ++ EI V + Sbjct: 315 TLKEYRKYFEKDAALQRRFQPVNVGEPSVN--EALAMLRGIKEKLEIHHNVTINDSALVA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A +LKM+ + + + ++ + + E + Sbjct: 373 AAKLSKRYIADRFLPDKAID--LID--EAAAELKMQIESEPSSLRKVRKDIETLEVENEA 428 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL----SEAEERRQYLFEELKAQ 449 +++ DE ++ S++ + A+++ L + + Sbjct: 429 LKMENDEKNQKRLDEIAKELANLKEKQNALNSQFENEKSVFDGISAKKKEIDLLKNEASL 488 Query: 450 ENSQCDFDPMKMRMESEIRGLLKGMEM 476 ++ +F +I L K +E+ Sbjct: 489 AKARGEFQKAAELEYGKIPSLEKEVEI 515 >gi|54035913|sp|Q9PKS5|CLPB_CHLMU Chaperone clpB Length = 867 Score = 137 bits (346), Expect = 6e-31 Identities = 42/275 (15%), Positives = 80/275 (29%), Gaps = 34/275 (12%) Query: 223 GFVKDVFQHCAPNWDFEALI-KELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + E +D V + + + Sbjct: 253 EFEERLKSVLKGVEASEGACILFIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGA 312 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ PSLE+ F++ EI V+ T + Sbjct: 313 TTLNEYQKYIEKDAALERRFQPIFVTEPSLED--AVFILRGLREKYEIFHGVRITEGALN 370 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R A D L D A + ++M+ I+E E + + + Sbjct: 371 AAVVLSYRYITDRFLPDKAID--LID--EAASLIRMQIGSLPLPIDEKERELSALIVKQE 426 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE--------RRQYLFE 444 + + A +E + LRL EE ++ E Sbjct: 427 AIKREQAPAYQEEANEMQKAIDRV-------KEELAALRLRWDEEKGLIAGLKEKKNSLE 479 Query: 445 ELK-AQENSQC--DFDPMKMRMESEIRGLLKGMEM 476 LK A+E ++ D++ + S I L K + + Sbjct: 480 NLKFAEEEAERTADYNRVAELRYSLIPSLEKEIRL 514 >gi|68551190|ref|ZP_00590613.1| AAA ATPase, central region:Clp, N terminal [Pelodictyon phaeoclathratiforme BU-1] Length = 441 Score = 136 bits (343), Expect = 1e-30 Identities = 25/185 (13%), Positives = 56/185 (30%), Gaps = 16/185 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + I Sbjct: 257 EFEERLKAVVREVQSAEGEVILFIDELHLLVGAGSAEGSMDAANILKPALARGELRCIGA 316 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D PS+E+ ++ EI V+ + Sbjct: 317 TTLDEYRKHIEKDAALERRFQTVVVDQPSVEDTV--SILRGLKEKYEIHHGVRIKDAAIV 374 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R A D L D A + L++E +++ + +R + E + Sbjct: 375 AAAELSNRYIADRFLPDKAID--LID--EASSRLRLEIDSSPEELDRINREIRRLEIERE 430 Query: 393 MFQLK 397 + + Sbjct: 431 ALRRE 435 >gi|71024695|ref|XP_762577.1| hypothetical protein UM06430.1 [Ustilago maydis 521] Length = 918 Score = 135 bits (341), Expect = 2e-30 Identities = 37/255 (14%), Positives = 85/255 (33%), Gaps = 52/255 (20%) Query: 242 IKELDFVRKIFRG-SEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFILMF 291 I +D + + G G ++ + K ++ ++ + Sbjct: 289 ILFIDEMHLLMAGQGSSGGGMDAANLLKPMLARGKLRVIGCTTANEYRQYIEKDAALERR 348 Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 FQ + P++E+ ++ E+ V+ + A+ R R A Sbjct: 349 FQSILVNEPTVEDCIA--ILRGIRDKYEVHHGVRILDSAIVSAAQLAKRYLTDRRLPDSA 406 Query: 352 CDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXX 411 D L D+ACA D+++ R+ ++++LE + + D Sbjct: 407 ID--LVDEACA--DVRVSRETVPEEVDKLERKRLQLEIAVHALSREKDAQS--------- 453 Query: 412 XXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL-------KAQENSQCDFDPMKMRME 464 K L E +++ Q + +EL +AQ+ + + ++ +ME Sbjct: 454 -----------------KQSLEETKKQIQAIDDELAPIKAAFEAQKAKGEEINTVRRKME 496 Query: 465 S---EIRGLLKGMEM 476 +I + ++ Sbjct: 497 EVRAKIAEAERRYDL 511 >gi|158818|gb|AAA29025.1| zinc-binding protein Length = 3759 Score = 135 bits (341), Expect = 2e-30 Identities = 29/148 (19%), Positives = 45/148 (30%), Gaps = 28/148 (18%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLCM--------CVICSK-FDFASNTCRWIG 174 R + C N L C S G C C C IC + +D + + Sbjct: 1383 RPLICVNCLKCKSCSTTKVSKFVGNLPMCTGCFKLRKKGNFCPICQRCYDDNDFDLKMME 1442 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 C C W H+ C + + + + + F C C +E + A Sbjct: 1443 CGDCGQWVHSKCEGLSDEQYNLLSTL-----PESIEFICKKCARRNE-------SSKIKA 1490 Query: 234 PNWDFEALIKE---LDFVRKIFRGSEDA 258 W + + L V K+ S A Sbjct: 1491 EEWRQAVMEEFKASLYSVLKLLSKSRQA 1518 >gi|1052593|emb|CAA90513.1| trithorax protein trxII [Drosophila melanogaster] Length = 3726 Score = 135 bits (341), Expect = 2e-30 Identities = 29/148 (19%), Positives = 45/148 (30%), Gaps = 28/148 (18%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLCM--------CVICSK-FDFASNTCRWIG 174 R + C N L C S G C C C IC + +D + + Sbjct: 1383 RPLICVNCLKCKSCSTTKVSKFVGNLPMCTGCFKLRKKGNFCPICQRCYDDNDFDLKMME 1442 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 C C W H+ C + + + + + F C C +E + A Sbjct: 1443 CGDCGQWVHSKCEGLSDEQYNLLSTL-----PESIEFICKKCARRNE-------SSKIKA 1490 Query: 234 PNWDFEALIKE---LDFVRKIFRGSEDA 258 W + + L V K+ S A Sbjct: 1491 EEWRQAVMEEFKASLYSVLKLLSKSRQA 1518 >gi|62998570|gb|AAF01451.2| HSP100 [Pleurotus sajor-caju] Length = 902 Score = 135 bits (340), Expect = 3e-30 Identities = 40/255 (15%), Positives = 79/255 (30%), Gaps = 50/255 (19%) Query: 223 GFVKDVFQHCAPNWDFEA-----LIKELDFVRKIFRG-SEDARGKKLFWKADELIEKLKS 276 + + + +I D + I G + G L+ + K Sbjct: 272 EYEERIKAVLNEVEKASEDGGPGVILFADELHLIMAGRGAEGGGMDAANLFKPLLARGKL 331 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + F + + PS+ ++ E+ V+ Sbjct: 332 RCIGATTLAEYRKYIETDAALERRFAQVLVNEPSVLETI--SILRGIREKYEVHHGVRIL 389 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R R A D L D+ACA +++ R+ + I++L+ Sbjct: 390 DGALIQAATLAHRYLTSRRLPDAAID--LVDEACA--SVRVNRETEPEAIDKLQRKRLEL 445 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + E + + D A +E RL A++ + EEL+ Sbjct: 446 EIEIHALEREKDAASKE--------------------------RLQAAKKAISDVDEELQ 479 Query: 448 AQENSQCDFDPMKMR 462 + + F KMR Sbjct: 480 PLQAA---FQAEKMR 491 Score = 40.6 bits (94), Expect = 0.096 Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 39/224 (17%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFEAL---IKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K + A F + + I RG + ++ Sbjct: 332 RCIGATTLAEYRKYIETDAALERRFAQVLVNEPSVLETISILRGIREK------YEVHHG 385 Query: 271 IEKLKSKLIDPLDACNFILMFFQE-----CDSDSPSL-----ENGEGGFLIAPQDACNEI 320 + L LI + L + D E + Q E+ Sbjct: 386 VRILDGALIQAATLAHRYLTSRRLPDAAIDLVDEACASVRVNRETEPEAIDKLQRKRLEL 445 Query: 321 AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK------------- 367 + R+ + ++E+++ KKA S +D + L+ A ++ Sbjct: 446 EIEIHALEREKDAASKERLQAAKKAISDVDEELQPLQA-AFQAEKMRGDNSTFCGGRWTN 504 Query: 368 -MERQKKKPQIEELESIVRLK-----QAEADMFQLKADEARREA 405 R K+ + ++ + LK + +A + QL+A +A +A Sbjct: 505 SRRRLKRLSEDRDITTASDLKFYAVPEVQARIEQLEAKKAAEDA 548 >gi|66505208|ref|XP_392252.2| PREDICTED: similar to ENSANGP00000028094 [Apis mellifera] Length = 3293 Score = 135 bits (340), Expect = 3e-30 Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 41/198 (20%) Query: 102 IQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPADDCDCDICSNKKG---FCNLC--- 155 Q+F H S S + LY R CQ+ + C + + G C++C Sbjct: 809 RQSFHH---SCLSKSGVSARLYSPERPYVCQSCVKCKSCGSEGVNVHVGNLPLCSMCFKL 865 Query: 156 -----MCVICSK-FDFASNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEM 208 C +C + ++ + + C CS+W H C + + ++ + Sbjct: 866 RQQGNYCPLCQRCYNENDFDTKMMECSECSYWVHAQCEGLSDERYQILSYL-----PDTI 920 Query: 209 LFHCIACNH--------------TSELFGFVKDVFQ----HCAPNW--DFEALIKELDFV 248 F C C+ + G +K + + A W E L + + Sbjct: 921 EFTCSQCSSNPNSIWRNAIEAELKAGFIGVIKSLSKNKKVCAALKWSPRKECLCRSVSNG 980 Query: 249 RKIFRGSEDARGKKLFWK 266 +K+ SE ++ Sbjct: 981 KKLDFSSEKTDSNIKEYE 998 >gi|68350763|gb|EAN31526.1| ClpB protein, putative [Theileria parva] Length = 985 Score = 134 bits (339), Expect = 3e-30 Identities = 32/283 (11%), Positives = 76/283 (26%), Gaps = 37/283 (13%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + + + ++ +D + + E ++ + + Sbjct: 356 EFEERLKEILSEIENSQGEIVMFIDEIHTLVGAGESQGSLDAGNILKPMLARGELRCIGA 415 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ D P++E ++ E+ V+ + Sbjct: 416 TTLQEYRQKIEKDKALERRFQPIYIDEPNIEETI--NILRGLKERYEVHHGVRILDSTLI 473 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R A D L D A LK++ K Q++ +E + + E Sbjct: 474 QAVLLSNRYITDRYLPDKAID--LID--EAAAKLKIQLSSKPLQLDIIERKLLQLEMEKI 529 Query: 393 MFQLKAD---------------EARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----L 432 D + +LK + + Sbjct: 530 SILNDNDNIGILSKNEKNDTLKPNDKLRLENIDKLVNELTKQKDELNEMWLKEKSLVDNI 589 Query: 433 SEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 +ER + E+ E ++R E+ + L ++ Sbjct: 590 RNIKERIDIVKIEIDKAERDFDLNHAAELRFET-LPDLENQLK 631 >gi|67465519|ref|XP_648944.1| AAA family ATPase, putative [Entamoeba histolytica HM-1:IMSS] Length = 866 Score = 133 bits (336), Expect = 9e-30 Identities = 41/273 (15%), Positives = 79/273 (28%), Gaps = 26/273 (9%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLK--- 275 + +K V + + +I +D + + G+ ++ + + Sbjct: 252 QFEERLKAVIKEVKESKIP--IILFIDEIHTVLGAGATGEGAMDAANILKPMLSRGELRC 309 Query: 276 ------SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTAR 329 + ++ FQ+ PS+E+ +++ E + T Sbjct: 310 IGATTLEEYRKYVEKDPAFERRFQQVYVSEPSVEDT--LYILRGIREKYENHYGLTITDS 367 Query: 330 KMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQA 389 + A R A D L D+ACA L ++ + +I+ LE Sbjct: 368 ALVSAATLSKRYINGRFLPDKAID--LVDEACA--TLFTQKNSQPEEIDRLERRETQINV 423 Query: 390 EADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--------SEAEERRQY 441 E + + E E + K KLR+ SE + Sbjct: 424 EKIALEREVKETDEEHKKVIEERLKEIEKEMSENKEKLTKLRINYEKEKGGSEEMKELAT 483 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 E +K + S D + I K M Sbjct: 484 KIESMKHKAESTKDLEVAADLKYYAIPEAEKRM 516 >gi|50288205|ref|XP_446531.1| unnamed protein product [Candida glabrata] Length = 908 Score = 133 bits (336), Expect = 9e-30 Identities = 37/252 (14%), Positives = 78/252 (30%), Gaps = 20/252 (7%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKL-----FWKADELIEKL 274 + +K V + + ++ +D + + +D L + Sbjct: 260 DFEERLKGVLKEVEESKT--LIVLFIDEIHMLMGNGKDDAANILKPALSRGHLKVIGATT 317 Query: 275 KSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ ++ FQ+ D P++ ++ EI V+ + Sbjct: 318 NNEYRSIVEKDGAFERRFQKIDVQEPTIRQTVA--ILRGLQPKYEIHHGVRILDSALVTA 375 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 ++ R R A D L D +CA + + R K +++ E ++L Q E Sbjct: 376 SQLAKRYLPYRRLPDSAID--LVDISCAG--VAVARDSKPEELDSKERQLQLLQVEIKAL 431 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + D A+ + LR EER+ + EEL + Sbjct: 432 ERDKD-----ADCTTKDRLKQAKKREASLIEELEPLRQRYNEERKGH--EELTKLKKKLD 484 Query: 455 DFDPMKMRMESE 466 + + + E Sbjct: 485 ELENKALDAERR 496 >gi|50311735|ref|XP_455896.1| unnamed protein product [Kluyveromyces lactis] Length = 899 Score = 133 bits (334), Expect = 1e-29 Identities = 36/256 (14%), Positives = 75/256 (29%), Gaps = 22/256 (8%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELI---------EKLKSKLIDPLDAC 285 +I +D + + D + ++ ++ Sbjct: 273 EESKTLIILFIDEIHMLMGQGVD-DSANAANILKPALSRGGLKVIGATTTNEYRSLVEKD 331 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 FQ+ D P+ ++ EI V+ + A+ R Sbjct: 332 GAFERRFQKIDVPEPTTRQTVA--ILRGLQPKYEIHHGVRILDSALVSAAQLAKRYLPYR 389 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL--KADEARR 403 R A D L D +CA + + R K +++ E + L Q E + + D + Sbjct: 390 RLPDSAID--LVDISCAG--VAVARDSKPEELDNKERELHLLQVEIKALERDEETDPTTK 445 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-QYLFEELK-AQENSQCDFDPMKM 461 E +Y + S + R+ + +EL+ +++ +D Sbjct: 446 ERLQQARQKEASLIEELEPMRQRYQQEVDSHEQLRQAKKKLDELENKCMDAERRYDNATA 505 Query: 462 --RMESEIRGLLKGME 475 I + K +E Sbjct: 506 ADLKYFAIPDIKKRIE 521 >gi|67463114|ref|XP_648214.1| HSP101-related protein [Entamoeba histolytica HM-1:IMSS] Length = 842 Score = 133 bits (334), Expect = 1e-29 Identities = 41/273 (15%), Positives = 79/273 (28%), Gaps = 26/273 (9%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLK--- 275 + +K V + + +I +D + + G+ ++ + + Sbjct: 252 QFEERLKAVIKEVKESKIP--IILFIDEIHTVLGAGATGEGAMDAANILKPMLSRGELRC 309 Query: 276 ------SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTAR 329 + ++ FQ+ PS+E+ +++ E + T Sbjct: 310 IGATTLEEYRKYVEKDPAFERRFQQVYVSEPSVEDT--LYILRGIREKYENHYGLTITDS 367 Query: 330 KMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQA 389 + A R A D L D+ACA L ++ + +I+ LE Sbjct: 368 ALVSAATLSKRYINGRFLPDKAID--LVDEACA--TLFTQKNSQPEEIDRLERRETQINV 423 Query: 390 EADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--------SEAEERRQY 441 E + + E E + K KLR+ SE + Sbjct: 424 EKIALEREVKETDEEHKKVIEERLKEIEKEMSENKEKLTKLRINYEKEKGGSEEMKELAT 483 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 E +K + S D + I K M Sbjct: 484 KIESMKHKAESTKDLEVAADLKYYAIPEAEKRM 516 >gi|60547711|gb|AAX23819.1| hypothetical protein At2g18880 [Arabidopsis thaliana] Length = 529 Score = 133 bits (334), Expect = 2e-29 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 22/170 (12%) Query: 122 LYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC------ 175 C+N+ACQN L + FC C C IC K+D + W+ C Sbjct: 115 GKMYCQNLACQNKLREEAT----------FCKRCSCCICFKYDDNKDPSLWLTCNSDSQF 164 Query: 176 --DVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 + C CH +CA K G S + F+C++C T+ +K Sbjct: 165 DGESCGLSCHLNCAFDSE--KSGLKEDTPSSDIDGCFNCVSCGKTNSKIECLKKQLIIAN 222 Query: 234 PNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLD 283 + K+ +G++ + ++ + LK++ P+ Sbjct: 223 EERRVGVFCYRILLAHKLLKGTKKYIIVS--EEVEKAVMHLKNEFGVPIS 270 >gi|34482740|emb|CAE09740.1| CLP PROTEASE ATP-BINDING SUBUNIT [Wolinella succinogenes] Length = 857 Score = 132 bits (333), Expect = 2e-29 Identities = 31/256 (12%), Positives = 77/256 (30%), Gaps = 33/256 (12%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + +I +D + I + + + Sbjct: 254 EFEDRLKKVVEEVKKAGNVILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGAT 313 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + + + FQ + P++ E ++ E V + Sbjct: 314 TLKEYRKYFEKDAALQRRFQPIFLNEPTIN--EALQILRGIKERLEAHHNVTIYDSALVA 371 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A +LKM+ + + ++ ++ ++ + E + Sbjct: 372 AAKLSSRYITDRYLPDKAID--LID--EAAAELKMQIESEPTELSLIKRQIQRLEVEKEA 427 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 ++ + EA K ++ L A+ER++ L + + ++ Sbjct: 428 LLMEKESTHSEARI------------------KEIQAELENAKERQRTLLAQFENEKAVF 469 Query: 454 CDFDPMKMRMESEIRG 469 + +K + + R Sbjct: 470 NEIASIKAKADELRRE 485 >gi|899254|emb|CAA90349.1| predicted trithorax protein [Drosophila virilis] Length = 3828 Score = 129 bits (326), Expect = 1e-28 Identities = 31/148 (20%), Positives = 47/148 (31%), Gaps = 28/148 (18%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLCM--------CVICSK-FDFASNTCRWIG 174 R + C N L C S G C C C IC K +D + + Sbjct: 1370 RPLICVNCLKCKSCATTKVSKFVGNLPMCTACFKLRKKGNFCPICQKCYDDNDFDLKMME 1429 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCA 233 C C+ W H+ C + + + + + F C C DV ++ A Sbjct: 1430 CGDCNQWVHSKCEGLSDEQYNLLSTL-----PESIEFICKKCARRC-------DVSRNKA 1477 Query: 234 PNWDFEALIKE---LDFVRKIFRGSEDA 258 W + + L V K+ S A Sbjct: 1478 DEWRQAVMEEFKSSLYSVLKLLSKSRQA 1505 >gi|57505852|ref|ZP_00371777.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter upsaliensis RM3195] Length = 857 Score = 129 bits (326), Expect = 1e-28 Identities = 35/264 (13%), Positives = 76/264 (28%), Gaps = 21/264 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + +I +D + I + + + Sbjct: 255 EFEDRLKSVVDEVIKSKNVILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGAT 314 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + + + FQ + PS+ E ++ EI V T + Sbjct: 315 TLKEYRKYFEKDAALQRRFQPVSVNEPSIN--EALAMLRGIKEKLEIHHNVSITDSALVA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A +LKM+ + + + ++ + + E + Sbjct: 373 AAKLSKRYINDRFLPDKAID--LID--EAAAELKMQIESEPSSLRKVRKELETLEVEKEA 428 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELKA 448 +++ +EA + +++ + +S ++ L E Sbjct: 429 LKMEQNEANEKRLEEIAKELANLKEEQNALNAQFENEKSVFDSISVKKKEIDTLKNEANL 488 Query: 449 QENSQCDFDPMKMRMESEIRGLLK 472 +N DF +I L K Sbjct: 489 AKNKG-DFQKAAELEYGQIPSLEK 511 >gi|57505126|ref|ZP_00371071.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter coli RM2228] Length = 857 Score = 129 bits (325), Expect = 2e-28 Identities = 34/264 (12%), Positives = 73/264 (27%), Gaps = 21/264 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + E +I +D + I + + + Sbjct: 255 EFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGAT 314 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + + + FQ + PS+ E ++ EI V + Sbjct: 315 TLKEYRKYFEKDAALQRRFQPVNVGEPSVN--EALAMLRGIKEKLEIHHNVTINDSALVA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A +LKM+ + + + + + + E + Sbjct: 373 AAKLSKRYIADRFLPDKAID--LID--EAAAELKMQIESEPSSLRKARKDIETLEVENEA 428 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELKA 448 +++ DE ++ S++ + +S ++ L E Sbjct: 429 LKMENDEKNQKRLDEIAKELANLKEKQSALNSQFENEKAVFDSISAKKKEIDSLKNEAVF 488 Query: 449 QENSQCDFDPMKMRMESEIRGLLK 472 +N +F +I K Sbjct: 489 AKNKG-EFQKAAELEYGKIPECEK 511 >gi|20808693|ref|NP_623864.1| ATPases with chaperone activity, ATP-binding subunit [Thermoanaerobacter tengcongensis MB4] Length = 816 Score = 128 bits (323), Expect = 2e-28 Identities = 43/259 (16%), Positives = 79/259 (30%), Gaps = 42/259 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + +I +D + + + + + ++I Sbjct: 258 EFEDRLKTVINEVIKAGNVILFVDEMHTLIGAGAAEGAIDASNILKPALARGEIQVIGAT 317 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ + P++E ++ E V+ T +E Sbjct: 318 TLDEYRKYVERDPALERRFQPIMVEEPTVEETI--EILKGLRDKYEAHHRVKITDEALEA 375 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A + ++++ P+I+ELE + Sbjct: 376 AAKLSHRYITDRFLPDKAID--LID--EAASRVRLKTVTAPPEIKELEDKIND------- 424 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + +EA R E K K+R E + R Q EELKA + Q Sbjct: 425 LIKEKEEAIRTQEY-----------------EKAAKIRDEEQKLREQ--LEELKA-KWQQ 464 Query: 454 CDFDPMKMRMESEIRGLLK 472 K EI ++ Sbjct: 465 NSLSEEKSVGPEEIAQVVS 483 >gi|23612849|ref|NP_704388.1| hypothetical protein [Plasmodium falciparum 3D7] Length = 1070 Score = 128 bits (323), Expect = 3e-28 Identities = 24/179 (13%), Positives = 56/179 (31%), Gaps = 17/179 (9%) Query: 224 FVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKLKSKLIDP 281 F + + D ++ +D + + ++ + + + I Sbjct: 408 FEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARGELRCIGA 467 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ + PS++ ++ E+ V+ + Sbjct: 468 TTVSEYRQFIEKDKALERRFQQILVEQPSVDETI--SILRGLKERYEVHHGVRILDSALV 525 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 A R A D L D A ++LK++ K Q+E +E + + E Sbjct: 526 QAAVLSDRYISYRFLPDKAID--LID--EAASNLKIQLSSKPIQLENIEKQLIQLEMEK 580 >gi|23480353|gb|EAA16934.1| ClpB protein [Plasmodium yoelii yoelii] Length = 1048 Score = 128 bits (321), Expect = 4e-28 Identities = 26/190 (13%), Positives = 57/190 (30%), Gaps = 17/190 (8%) Query: 224 FVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKLKSKLIDP 281 F + + D ++ +D + + L+ + + + I Sbjct: 406 FEERLKSILKEIQDSEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPLLARGELRCIGA 465 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS++ ++ E+ V+ + Sbjct: 466 TTVSEYRQFIEKDKALERRFQQILVDQPSVDETI--SILRGLKERYEVHHGVRILDSALV 523 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R A D L D A ++LK++ K Q++ +E + + E Sbjct: 524 QAAILSDRYISYRFLPDKAID--LID--EAASNLKIQLSSKPIQLDNIEKQLIQLEMEKI 579 Query: 393 MFQLKADEAR 402 A Sbjct: 580 SILGDKQTAS 589 >gi|7189542|gb|AAF38444.1| ATP-dependent Clp protease, subunit B [Chlamydophila pneumoniae AR39] Length = 872 Score = 127 bits (320), Expect = 6e-28 Identities = 36/252 (14%), Positives = 76/252 (30%), Gaps = 33/252 (13%) Query: 244 ELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFILMFFQE 294 +D V + + + ++ ++ + FQ Sbjct: 281 FIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGATTLNEYQKYIEKDAALERRFQP 340 Query: 295 CDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDR 354 PSLE+ F++ EI V+ T + R A D Sbjct: 341 IFVTEPSLED--AVFILRGLREKYEIFHGVRITEGALNAAVLLSYRYIPDRFLPDKAID- 397 Query: 355 ELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXX 414 L D A + ++M+ I+E E + + + + + + +E Sbjct: 398 -LID--EAASLIRMQIGSLPLPIDEKERELAALIVKQEAIKREQSPSYQEEA-------D 447 Query: 415 XXXXXXXXYTSKYLKLRLSEAEE--------RRQYLFEELK-AQENSQC--DFDPMKMRM 463 + LRL EE ++ E +K ++E ++ D++ + Sbjct: 448 AMQKSIDALREELASLRLGWDEEKKLISGLKEKKNSLESMKFSEEEAERVADYNRVAELR 507 Query: 464 ESEIRGLLKGME 475 S I L + ++ Sbjct: 508 YSLIPQLEEEIK 519 >gi|7576225|emb|CAB87915.1| AtClpC [Arabidopsis thaliana] Length = 952 Score = 127 bits (320), Expect = 7e-28 Identities = 26/193 (13%), Positives = 59/193 (30%), Gaps = 22/193 (11%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D V + + + + + I Sbjct: 371 EFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 430 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P++E E ++ EI ++ T + Sbjct: 431 TIDEYRKHIEKDPALERRFQPVKVPEPTVE--EAIQILQGLRERYEIHHKLRYTDEALVA 488 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ + A D L D A + +++ + + ELE +R Sbjct: 489 AAQLSHQYISDRFLPDKAID--LID--EAGSRVRLRHAQLPEEARELEKQLRQI------ 538 Query: 394 FQLKADEARREAE 406 + +EA R + Sbjct: 539 -TKEKNEAVRSQD 550 >gi|49655166|emb|CAG87721.1| unnamed protein product [Debaryomyces hansenii CBS767] Length = 900 Score = 127 bits (319), Expect = 7e-28 Identities = 35/252 (13%), Positives = 75/252 (29%), Gaps = 17/252 (6%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKL-----FWKADELIEKLKSKLIDPLDACNFIL 289 E +I +D + + + L + ++ + Sbjct: 272 EKSNEMIILFIDEIHMLMGDGKSDAANLLKPMLARGSLHCIGATTFTEYRKFIAKDGAFE 331 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ+ D + ++ ++ EI V+ + A+ R Sbjct: 332 RRFQKIDVPASTVPETVA--ILRGLQPRYEIHHGVRILDSALVTAAQLASRYLTYRSLPD 389 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL--KADEARREAEX 407 A D L D + + R K +++ LE + L + E + + +AD ++ Sbjct: 390 SAVD--LID--ETAATVAVARDSKPEELDTLERQLHLIEVEINALERDVEADADSKDRLE 445 Query: 408 XXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFE-ELKAQENSQC-DFDPMKMRM 463 ++ + R E ++ L E E+KA + + D Sbjct: 446 VAKRKKAELEEQLGPLRERFNQERAGHEELIAAKRKLDELEIKALDAERRHDTATAADLR 505 Query: 464 ESEIRGLLKGME 475 I + K +E Sbjct: 506 YFAIPDVAKQIE 517 >gi|29840383|ref|NP_829489.1| ATP-dependent Clp protease, subunit B [Chlamydophila caviae GPIC] Length = 864 Score = 127 bits (319), Expect = 7e-28 Identities = 38/269 (14%), Positives = 78/269 (28%), Gaps = 34/269 (12%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + + I +D V + + + Sbjct: 253 EFEERLKSVLKDVESVDGESILFIDEVHTLVGAGATDGAMDAANLLKPALARGTLHCIGA 312 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ PSLE+ F++ EI V+ T + Sbjct: 313 TTLNEYQKYIEKDAALERRFQPIFVTEPSLED--AVFILRGLREKYEIFHGVRITEGALN 370 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R A D L D A + ++M+ I+E E + + + Sbjct: 371 AAVLLSYRYIPDRFLPDKAID--LID--EAASLIRMQIGSLPLPIDEKERELAALIVKQE 426 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE--------RRQYLFE 444 + + + +E + LRL EE ++ E Sbjct: 427 AIKREKAPSYQEEA-------AAMQQSIEQLKEELAALRLRWDEEKKLITGLKEKKNSLE 479 Query: 445 ELK-AQENSQC--DFDPMKMRMESEIRGL 470 +K ++E ++ D++ + S I L Sbjct: 480 NMKFSEEEAERVADYNRVAELRYSLIPAL 508 >gi|57228420|gb|AAW44877.1| chaperone, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 834 Score = 127 bits (319), Expect = 7e-28 Identities = 35/262 (13%), Positives = 77/262 (29%), Gaps = 20/262 (7%) Query: 226 KDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS--------K 277 K + + +I +D + + + + + + Sbjct: 173 KSLLKDIEEEE--GNVIVFIDELHTLLNLGKAEGSLDAGNMIKPALARGLQLVGATTLDE 230 Query: 278 LIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEE 337 ++ + FQ + PS+E+ ++ + E+ VQ + A Sbjct: 231 YRKSIEKDAALQRRFQPIMINEPSVESTI--SILRGLKSRFEVHFGVQIADSALVTAAVY 288 Query: 338 KMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 R A D L D+A + LK+ ++ + ++E+L+ + E + + + Sbjct: 289 SDRYISDRFLPDKAID--LVDEASSA--LKLAQESRPTELEKLDRETVTLEIERESLKNE 344 Query: 398 ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA--QENSQCD 455 D + + R AE + E EN+Q + Sbjct: 345 EDPFSVSRMEKVEKELEEKKQEQRRLADLWAQERERVAEIKGIKEQIEQANVDLENAQRN 404 Query: 456 FDPMKM--RMESEIRGLLKGME 475 + K S I L + Sbjct: 405 GEFEKASKLRFSTIPQLQAKLP 426 >gi|42561142|ref|NP_975593.1| ATP dependant protease ClpB [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 713 Score = 127 bits (319), Expect = 8e-28 Identities = 34/269 (12%), Positives = 78/269 (28%), Gaps = 22/269 (8%) Query: 224 FVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSE--DARGKKLFWKADELIEKLK----- 275 + V +I +D + I + G + + + + Sbjct: 107 YESRVKAVVNEIQKSNGEIILFIDELHLIVGAGRTGNNSGMDVSNLLKPALARGELKAIG 166 Query: 276 ----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ ++ + FQ P+++ ++ E V+ + Sbjct: 167 STTLNEYRQYIEKDAALERRFQRVLVSEPTIDQTI--SILRGLKDRFETYHGVRIHDNAL 224 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 + R A D L D+ACA ++ E +++++ V + E Sbjct: 225 VSAVKLSSRYITDRYLPDKAID--LVDEACA--SIRTELASVPIELDQVNRKVMQLEIET 280 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEELK-AQ 449 + + D+ +E K+ K + + + E LK Sbjct: 281 SALEKEKDDKSKERWQEAKKELDSLKIEQASLNEKWEKEKEELSRINSVKSSIESLKQEL 340 Query: 450 ENSQCD--FDPMKMRMESEIRGLLKGMEM 476 E +Q D + S + L K + + Sbjct: 341 ETAQNDGNYKRAGEIQYSLLPSLEKSLAL 369 >gi|44889002|sp|P31540|HSP98_NEUCR Heat shock protein HSP98 Length = 927 Score = 127 bits (319), Expect = 8e-28 Identities = 42/258 (16%), Positives = 74/258 (28%), Gaps = 23/258 (8%) Query: 235 NWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP---------LDA 284 + E +I +D + + G+ G ++ + + I ++ Sbjct: 285 SESKEMIILFIDEIHLLMGAGASGEGGMDAANLLKPMLARGQLHCIGATTLAEYRKYIEK 344 Query: 285 CNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKK 344 FQ+ PS+ ++ E+ V + + A R Sbjct: 345 DAAFERRFQQVIVKEPSVSETI--SILRGLKEKYEVHHGVTISDAAIVAAANLAARYLTS 402 Query: 345 ARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 R A D L D+A A + E + I+ LE +R + E + DEA + Sbjct: 403 RRLPDSAID--LIDEAAAAVRVARE--SQPEIIDSLERKLRQLKIEIHALSREKDEASKA 458 Query: 405 AEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKAQENSQCDFDPMKM- 461 KY K R +E R L + E + D + Sbjct: 459 RLEQAKKDAENVEEELRPLREKYEQEKQRAKALQEARMKLESLRQKAEEASRMGDHSRAA 518 Query: 462 -RMESEIRGLL---KGME 475 I K +E Sbjct: 519 DLQYYAIPEQEAVIKRLE 536 >gi|51038197|gb|AAT94000.1| unknow protein [Oryza sativa (japonica cultivar-group)] Length = 607 Score = 126 bits (318), Expect = 1e-27 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 21/161 (13%) Query: 126 CRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGC-------DVC 178 C+N+AC+ ++ +++ FC C C IC +FD + W+ C + C Sbjct: 53 CKNLACKAVV----------TSEDSFCKRCSCCICHQFDDNKDPSLWLVCASENDDKNCC 102 Query: 179 SHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDF 238 CH +CA+ ++G G + + C +C S + G+ K Sbjct: 103 GSSCHIECAL--QHKRVGCFNLGNIIQLDGSYSCASCGKVSGILGYWKRQLVIAKDARRV 160 Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 + L + ++ G+ R K+L ++ KL+S++ Sbjct: 161 DMLCHRIYLSYRLLGGT--TRFKELHGIIEDAKAKLESEVG 199 >gi|57241181|ref|ZP_00369128.1| clpB protein VC0711 [Campylobacter lari RM2100] Length = 857 Score = 126 bits (317), Expect = 1e-27 Identities = 34/264 (12%), Positives = 75/264 (28%), Gaps = 21/264 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + +I +D + I + + + + Sbjct: 255 EFEDRLKAVVNEVIKHKNIILFIDEIHTIVGAGANEGSMDAANILKPALARGELHTIGAT 314 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + + + FQ + PS+ E ++ EI V + Sbjct: 315 TLKEYRKYFEKDAALQRRFQPVNVAEPSVN--EALAMLRGIKEKLEIHHNVTINDSALVA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A +LKM+ + + + ++ + + E + Sbjct: 373 AAKLSKRYIANRFLPDKAID--LID--EAAAELKMQIESEPNSLRKVRKQIESLEVENEA 428 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELKA 448 +++ +EA + +K+ + +S ++ L E Sbjct: 429 LKMEENEANEKRLEEIKKELANLKEEQIKLNAKFENEKAVFNGISAKKKEIDTLKNEAIL 488 Query: 449 QENSQCDFDPMKMRMESEIRGLLK 472 +N DF +I K Sbjct: 489 AKNKG-DFQKAAEIEYGKILECEK 511 >gi|23494372|dbj|BAC19339.1| putative endopeptidase Clp ATP-binding chain C [Corynebacterium efficiens YS-314] Length = 927 Score = 126 bits (316), Expect = 2e-27 Identities = 34/261 (13%), Positives = 71/261 (27%), Gaps = 50/261 (19%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------- 276 F + + + +I +D + + + + + Sbjct: 283 FEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATT 342 Query: 277 --KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 + ++ + FQ PS+E ++ E V T + Sbjct: 343 LDEYRKHIEKDAALERRFQPVQVPEPSVE--LSIEILKGLRDRYEAHHRVSITDGALVAA 400 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV----RLKQAE 390 A+ R A D L D A ++++R + E++ + R K+A Sbjct: 401 AQLSDRYINDRFLPDKAVD--LID--EAGARMRIKRMTAPESLREVDERIADVRREKEAA 456 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE 450 D + K KL AE+ +Q+ +L+ Sbjct: 457 IDAQDFEK---------------------AAGLRDKERKLGEERAEKEKQWRSGDLE--- 492 Query: 451 NSQCDFDPMKMRMESEIRGLL 471 + E +I +L Sbjct: 493 -------EIAEVGEEQIAEVL 506 >gi|50759355|ref|XP_425739.1| PREDICTED: similar to C-ski protein FB28 - chicken [Gallus gallus] Length = 2940 Score = 126 bits (316), Expect = 2e-27 Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 28/179 (15%) Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE--- 303 D+ L + + L + L S L F+ M ++ + + +L+ Sbjct: 2738 EVAAHSDSHSSGLEAELEHLRQALDSGLDTKEAKEKFLHEVVKMRVKQEEKLNAALQAKR 2797 Query: 304 --NGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--- 357 + E FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 2798 SLHQELEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQAR 2857 Query: 358 -----DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C L+ K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 2858 QIRVCDKGCEAGRLR---AKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 2911 >gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana] Length = 929 Score = 125 bits (315), Expect = 2e-27 Identities = 37/262 (14%), Positives = 81/262 (30%), Gaps = 42/262 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D V + + + + + I Sbjct: 350 EFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 409 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P+++ ++ EI ++ T + Sbjct: 410 TLDEYRKHIEKDPALERRFQPVKVPEPTVDETI--QILKGLRERYEIHHKLRYTDESLVA 467 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ + A D L D A + +++ + + ELE +R Sbjct: 468 AAQLSYQYISDRFLPDKAID--LID--EAGSRVRLRHAQVPEEARELEKELRQI------ 517 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + +EA R + K LR E E R + + K +E S+ Sbjct: 518 -TKEKNEAVRGQDF-----------------EKAGTLRDREIELRAEVSAIQAKGKEMSK 559 Query: 454 CD---FDPMKMRMESEIRGLLK 472 + + M ES+I+ ++ Sbjct: 560 AESETGEEGPMVTESDIQHIVS 581 >gi|32261656|gb|AAP76706.1| ATP-dependent CLP protease ClpA [Helicobacter hepaticus ATCC 51449] Length = 859 Score = 125 bits (314), Expect = 3e-27 Identities = 31/265 (11%), Positives = 71/265 (26%), Gaps = 21/265 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPL 282 F + + +I +D + I + + + I Sbjct: 254 EFEERLKNVVDEVKKAGNIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGAT 313 Query: 283 D---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + FQ + + PS+ E ++ E V T + Sbjct: 314 TLKEYRKYFEKDAALTRRFQPINVNEPSIN--EALQILRGIKPNLEAHHNVNITDAALVA 371 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A +LKM+ + + ++ +++ + + E Sbjct: 372 AAKLSSRYITDRFLPDKAID--LID--EAAAELKMQIESEPLELSKIKKHIANLEVEKQA 427 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYLFEELKA 448 ++ K+ + R++ + L E + Sbjct: 428 LNMEKTNVNEARVLEIDKELENLREEKMSLEGKFEQEKSVFTRIATIKAELDSLKRESEL 487 Query: 449 QENSQCDFDPMKMRMESEIRGLLKG 473 + S D++ +I + Sbjct: 488 AKRSG-DYNKAAEIDYGKIPDIQAQ 511 >gi|399212|sp|P31541|CLAA_LYCES ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplast precursor Length = 926 Score = 124 bits (313), Expect = 4e-27 Identities = 39/253 (15%), Positives = 77/253 (30%), Gaps = 48/253 (18%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D V + + + + + I Sbjct: 350 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 409 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS++ ++ EI + T +E Sbjct: 410 TLDEYRKHIEKDPALERRFQPVKVPEPSVDETI--QILKGLRERYEIHHKLHYTDEAIEA 467 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ + A D L D A + +++ + + ELE +R Sbjct: 468 AAKLSHQYISDRFLPDKAID--LID--EAGSRVRLRHAQLPEEARELEKELRQI------ 517 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + +EA R + K +LR E + LKAQ ++ Sbjct: 518 -TKEKNEAVRGQDF-----------------EKAGELRDREMD---------LKAQISAL 550 Query: 454 CDFDPMKMRMESE 466 D + K + ESE Sbjct: 551 IDKNKEKSKAESE 563 >gi|68548612|ref|ZP_00588090.1| AAA ATPase, central region [Shewanella amazonensis SB2B] Length = 516 Score = 124 bits (313), Expect = 4e-27 Identities = 27/177 (15%), Positives = 53/177 (29%), Gaps = 10/177 (5%) Query: 305 GEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVT 364 G ++ E+ V+ T + A R + A D L D A + Sbjct: 3 GRPIAILRGLKERYELHHHVEITDPAIVAAASMSHRYVSDRKLPDKAID--LID--EAAS 58 Query: 365 DLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYT 424 ++M+ K ++ LE + E + DEA R+ Sbjct: 59 SIRMQIDSKPESLDRLERRAIQLKLEEQALAKENDEASRKRLEHLRHELKEVEAKANELN 118 Query: 425 SKYLKLRLSEA-----EERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + + + A + + +L+ + D M I L K +++ Sbjct: 119 EIWRTEKAALAGTQHIKADLEQARMDLEVARRA-SDLTRMSELQYGRIPELEKQLDL 174 >gi|71677561|ref|ZP_00675297.1| AAA ATPase, central region:Clp, N terminal [Trichodesmium erythraeum IMS101] Length = 905 Score = 123 bits (308), Expect = 2e-26 Identities = 32/216 (14%), Positives = 62/216 (28%), Gaps = 22/216 (10%) Query: 265 WKADELIEKLKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQD 315 ++ + + + I ++ + FQ+ + PS+E+ ++ Sbjct: 318 NLLKPMLARGELRCIGATTIDEYRKHIEKDAALERRFQKVEVGQPSVEDTI--SILRGLK 375 Query: 316 ACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKP 375 E V+ T + A R A D L D A LKME K Sbjct: 376 DRYETHHGVKITDAALVAAATLSNRYISDRFLPDKAID--LVD--EAAAQLKMEITSKPV 431 Query: 376 QIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS-KYLKLRLSE 434 ++E ++ + + E + + +E LK + + Sbjct: 432 ELEAIDRRIMQLEMEKLSIEGELSGTNKEKNSEAILSTKVSPALERITNEINSLKQKQEK 491 Query: 435 A------EERRQYLFEELKAQENSQCDFDPMKMRME 464 E+ LKA+E+ R Sbjct: 492 FSSQWSGEKELLNSINSLKAEEDKIKVQIEQAERAY 527 >gi|46400003|emb|CAF23452.1| probable endopeptidase Clp ATP-binding chain [Parachlamydia sp. UWE25] Length = 868 Score = 122 bits (307), Expect = 2e-26 Identities = 34/276 (12%), Positives = 79/276 (28%), Gaps = 38/276 (13%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + +I +D V + + + Sbjct: 254 EFEERLKGILQDIEKSEGQIILFIDEVHTLIGAGATDGAMDAANLLKPALARGILHCIGA 313 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ + P++E+ ++ EI V T + Sbjct: 314 TTLNEYQKYIEKDAALERRFQLVLVNEPTIEDSIA--ILRGLRERYEIYHGVHITESAIH 371 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R R A D L D++ + ++M+ + I+ E + E + Sbjct: 372 AAVLLSSRYITDRRLPDKAID--LIDES--ASLIRMQLGSRPLPIDNKERELAGLIVEQE 427 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR------------- 439 + ++ + + LR +E++ Sbjct: 428 AMKRESTPLAK-------NEVEKLEGRIAQIKEELKILREQWDQEKKIIESLKEKKDKLE 480 Query: 440 QYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + FEE A+ + D++ + + I L K +E Sbjct: 481 KLRFEEEAAERKA--DYNRVAELRYNLIPQLQKEIE 514 >gi|461753|sp|P35100|CLPA_PEA ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor Length = 922 Score = 121 bits (304), Expect = 4e-26 Identities = 22/179 (12%), Positives = 56/179 (31%), Gaps = 15/179 (8%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D V + + + + + I Sbjct: 348 EFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 407 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P+++ ++ EI ++ T + Sbjct: 408 TLDEYRKHIEKDPDLERRFQPVKVPEPTVDETI--QILKGLRERYEIHHKLRYTDEALIA 465 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A+ + A D L D A + ++++ + + +EL+ VR E + Sbjct: 466 AAQLSYQYISDRFLPDKAID--LVD--EAGSRVRLQHAQLPEEAKELDKEVRKIVKEKE 520 >gi|15827032|ref|NP_301295.1| putative ATP-dependent Clp protease [Mycobacterium leprae TN] Length = 848 Score = 121 bits (303), Expect = 6e-26 Identities = 31/228 (13%), Positives = 63/228 (27%), Gaps = 32/228 (14%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + +I +D + + + + + + I Sbjct: 265 FEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATT 324 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ P++E+ ++ E V T M Sbjct: 325 LDEYRKYIEKDAALERRFQPVQVGEPTVEHTI--EILKGLRDRYEAHHRVSITDSAMVAA 382 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R A D L D A +++ R P + E + + AEA Sbjct: 383 ATLADRYINDRFLPDKAID--LID--EAGARMRIRRMTAPPDLREFDEKI----AEARRE 434 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL 442 + A +A+ + +L AE +Q+ Sbjct: 435 KESAIDAQ-------------DFEKAASLRDREKQLVAQRAEREKQWR 469 >gi|18859373|ref|NP_571010.1| nuclear oncoprotein skia [Danio rerio] Length = 727 Score = 119 bits (300), Expect = 1e-25 Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 28/179 (15%) Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE--- 303 + G E L + + L + L + L F+ M ++ + +L+ Sbjct: 522 LLSGGEGHAMNNLESELETLRQALDNGLDSKESKEKFLHEIVKMRVKQEEKLGSALQAKR 581 Query: 304 --NGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--- 357 E FL +A ++ E E ++ +++E + E R ++A RELE Sbjct: 582 SLQQELEFLRVAKKEKLREATEAKRNLRKEIERLRAESERKMREANESRMRLKRELEQAR 641 Query: 358 -----DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C L+ K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 642 QLRVCDKGCEAGRLR---AKYSAQIEDLQ--VKLQHAEADREQLRADLIHEREAREHLE 695 >gi|21203645|dbj|BAB94345.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2] Length = 818 Score = 119 bits (299), Expect = 2e-25 Identities = 36/268 (13%), Positives = 79/268 (29%), Gaps = 47/268 (17%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + + + + + + I Sbjct: 256 EFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGAT 315 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D PS+ + ++ E + + +E Sbjct: 316 TLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVA--ILKGLRDRYEAHHRINISDEAIEA 373 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 + R A D L D A + ++++ ++E+E E + Sbjct: 374 AVKLSNRYVSDRFLPDKAID--LID--EASSKVRLKSHTTPNNLKEIE-------QEIEK 422 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ-ENS 452 + + D A E LR + + +QY EE K + +N+ Sbjct: 423 VKNEKDAAVHAQEF-----------------ENAANLRDKQTKLEKQY--EEAKNEWKNA 463 Query: 453 QCDFDPMKMRMESEIRGL---LKGMEMT 477 Q E +I + G+ +T Sbjct: 464 QNGMSTS--LSEEDIAEVIAGWTGIPLT 489 >gi|12045215|ref|NP_073026.1| ATP-dependent Clp protease, ATPase subunit (clpB) [Mycoplasma genitalium G-37] Length = 714 Score = 119 bits (299), Expect = 2e-25 Identities = 36/273 (13%), Positives = 84/273 (30%), Gaps = 26/273 (9%) Query: 223 GFVKDVFQH-CAPNWDFEALIKELDFVRKI--FRGSEDARGKKLFWKADELIEKLKSKLI 279 F K + +I +D + +I + + + ++ + + K+I Sbjct: 108 EFEKRINTILKQVKESNGRIILFIDEIHQIVGLGRNSSSGAMDIANILKPMLARGEIKVI 167 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ+ + PS + E ++ E+ + Sbjct: 168 GATTLKEYREYIEKDGALERRFQKILINEPS--SQEALTIMRGLKTRWELFHNITIFDSA 225 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + E R + A D L D A +K E + I+ L+ + + E Sbjct: 226 LVAAVEMSTRYINERNLPDKAID--LID--EAAAKIKTEMSSEPVAIDSLKREIINLETE 281 Query: 391 ADMFQLKADEARRE----AEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEE 445 + + ++ +++ K + E + + EE Sbjct: 282 YAALKQDKENDNKQSKKEYLEKLKKQLDALKQKRDSLINEWKKEKADFENINKLKKEIEE 341 Query: 446 LK-AQENSQCD--FDPMKMRMESEIRGLLKGME 475 + E Q + ++ + S+I L K +E Sbjct: 342 FQTKLETYQSEGNYESASKILYSDIPRLKKELE 374 >gi|54022379|ref|YP_116621.1| putative Clp protease [Nocardia farcinica IFM 10152] Length = 851 Score = 119 bits (299), Expect = 2e-25 Identities = 36/259 (13%), Positives = 75/259 (28%), Gaps = 42/259 (16%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + +I +D + + + + + + I Sbjct: 262 FEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTIGATT 321 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ P++E+ ++ E V T + Sbjct: 322 LDEYRKYIEKDAALERRFQPVQVGEPTVEHTI--NILKGLRDRYEAHHRVSITDGALVAA 379 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R A D L D A +++ R P + E + + A+A Sbjct: 380 ATLADRYINDRFLPDKAID--LID--EAGARMRIRRMTAPPDLREFDDKI----ADARRE 431 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + A +A+ K +LR + E++ E + Q S Sbjct: 432 KESAIDAQ--------------------DFEKAARLR--DKEKQLVAKRAEREKQWRSG- 468 Query: 455 DFDPMKMRMESEIRGLLKG 473 D D + + +I +L Sbjct: 469 DLDVVAEVDDEQIAEVLAN 487 >gi|50923949|ref|XP_472335.1| OSJNBa0039C07.4 [Oryza sativa (japonica cultivar-group)] Length = 888 Score = 118 bits (297), Expect = 3e-25 Identities = 31/262 (11%), Positives = 82/262 (31%), Gaps = 42/262 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D V + + + + + I Sbjct: 314 EFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 373 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P+++ ++ E+ ++ T + Sbjct: 374 TLDEYRKHIEKDPALERRFQPVKVPEPTVDETI--QILRGLRERYELHHKLRYTDDSLIA 431 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ + A D L D A + +++ + + +EL+ +R Sbjct: 432 AAQLSYQYISDRFLPDKAID--LID--EAGSRVRLRHAQLPDEAKELDKELRQ------- 480 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ--YLFEELKAQEN 451 +EA R + K +LR E E + Q + ++ K Sbjct: 481 VTKDKNEAVRGQDF-----------------EKAGELRDREMELKAQITAIIDKSKEMVK 523 Query: 452 SQCD-FDPMKMRMESEIRGLLK 472 ++ + + + E++I+ ++ Sbjct: 524 AETESGEVGPLVTEADIQHIVS 545 >gi|1673983|gb|AAB95959.1| ATP-dependent protease binding subunit ClpB [Mycoplasma pneumoniae M129] Length = 715 Score = 118 bits (296), Expect = 3e-25 Identities = 38/249 (15%), Positives = 82/249 (32%), Gaps = 36/249 (14%) Query: 239 EALIKELDFVRKI--FRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNF 287 +I +D + +I + + + ++ + + K+I ++ Sbjct: 125 GKIILFIDEIHQIVGLGRNSSSGAMDIANILKPMLARGEIKVIGATTLKEYREYVEKDGA 184 Query: 288 ILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARS 347 + FQ+ PS + E ++ E+ + + E R Sbjct: 185 LERRFQKILVSEPSQQ--EALTIMRGLKTRWELFHNLTIFDSALVAAVEMSARYIPDRNL 242 Query: 348 VLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEX 407 A D L D+A A +K E + I+ L+ + + E + + A + + Sbjct: 243 PDKAID--LIDEASA--KIKTEMASEPVVIDTLKREIINLETEYAALKQDKENADNKKKQ 298 Query: 408 XXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEI 467 LK +L E +++R L E K ++ + + +K EI Sbjct: 299 GHLDN---------------LKQQLDELKKKRDSLTAEWKKEKTNFESINKLK----KEI 339 Query: 468 RGLLKGMEM 476 L +E+ Sbjct: 340 EDLQTRLEL 348 >gi|68262963|emb|CAI36451.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411] Length = 885 Score = 118 bits (296), Expect = 4e-25 Identities = 33/258 (12%), Positives = 72/258 (27%), Gaps = 46/258 (17%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------- 276 F + + + +I +D + + + + + Sbjct: 276 FEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGELQTIGATT 335 Query: 277 --KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 + ++ + FQ PS+E ++ E V T ++ Sbjct: 336 LDEYRKHIEKDAALERRFQPVQVPEPSVELTV--EILKGLRDRYEAHHRVSITDGALKAA 393 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A+ R A D L D A ++++R I++++ + Sbjct: 394 AQLADRYINDRFLPDKAVD--LID--EAGARMRIKRMTAPKAIQDIDDKI--------AE 441 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + EA + + K LR E + L EE +E + Sbjct: 442 VRRKKEAAIDDQDF----------------EKAAALRDDE-----RKLGEERAEKEKAWR 480 Query: 455 --DFDPMKMRMESEIRGL 470 + D + E +I + Sbjct: 481 AGELDEVAEVGEEQIAEV 498 >gi|37521633|ref|NP_925010.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC 7421] Length = 819 Score = 118 bits (295), Expect = 4e-25 Identities = 31/255 (12%), Positives = 72/255 (28%), Gaps = 41/255 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + ++ +D V + + + + + I Sbjct: 255 EFEERLKKIMDEIRAAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 314 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P+++ ++ E ++ T + Sbjct: 315 TLDEYRKHIERDAALERRFQPVMVGEPTVDETI--EILRGLRERYEQHHKLKITDEALIA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A + +++ + P +EL+ +R Sbjct: 373 AAQLSDRYISDRYLPDKAID--LVD--EAGSRVRLLSSQLPPAAKELDKELRQIL----- 423 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + D+A R + + +LR E E + Q + S+ Sbjct: 424 --KEKDDAVRGQDY-----------------ERAGELRDREMEIKSQIR--SIAQARKSE 462 Query: 454 CDFDPMKMRMESEIR 468 + E +I Sbjct: 463 TANEESPNVTEEDIA 477 >gi|7269920|emb|CAB81013.1| putative protein [Arabidopsis thaliana] Length = 714 Score = 118 bits (295), Expect = 4e-25 Identities = 39/179 (21%), Positives = 65/179 (36%), Gaps = 24/179 (13%) Query: 109 NISLSQSSLIEIFLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASN 168 + S S + C+N+AC+ +L + FC C C IC K+D + Sbjct: 129 SGSCSSVNTKGESTTIYCKNLACRAVLR----------QEDSFCRRCSCCICRKYDDNKD 178 Query: 169 TCRWIGC--------DVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSE 220 W+ C + C CH +CA +G + F+C++C + Sbjct: 179 PSLWLTCSSDPPFEGESCGFSCHLECAFNTEKSGLGKDKQS----EGCCFYCVSCGKANS 234 Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 L K E L L V+K+ + S R L DE ++ L++ + Sbjct: 235 LLECWKKQLTIAKETRRVEVLCYRLFLVQKLLKSSTKYR--NLCEVVDEAVKTLEADVG 291 >gi|2493732|sp|P71404|CLPB_HELPY Chaperone clpB Length = 856 Score = 118 bits (295), Expect = 5e-25 Identities = 29/267 (10%), Positives = 76/267 (28%), Gaps = 21/267 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + + +I +D + I G + + + Sbjct: 252 EFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPALARGELHTIGAT 311 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + + + FQ + PS+ E ++ E + + Sbjct: 312 TLKEYRKYFEKDMALQRRFQPILLNEPSIN--EALQILRGLKETLETHHNITINDSALIA 369 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D+ LKM+ + + ++ ++ ++ + E Sbjct: 370 SAKLSSRYITDRFLPDKAID--LIDEG--AAQLKMQMESEPAKLSSVKRSIQRLEMEKQA 425 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 +++ E+ + +++ + +E + E ++ ++ Sbjct: 426 LEMEKKESNAKRMQEILKELSDLKEEKIQLEAQFENEK-EVFKEISRLKMEMESLKKEAE 484 Query: 454 C-----DFDPMKMRMESEIRGLLKGME 475 D+ S+I K E Sbjct: 485 RFKRNGDYQQAGEIEYSKIPENKKKEE 511 >gi|27467205|ref|NP_763842.1| endopeptidase [Staphylococcus epidermidis ATCC 12228] Length = 817 Score = 118 bits (295), Expect = 5e-25 Identities = 36/267 (13%), Positives = 79/267 (29%), Gaps = 45/267 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + + + + + + I Sbjct: 256 EFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGAT 315 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D P++E+ ++ E + + +E Sbjct: 316 TLDEYRKNIEKDAALERRFQPIQVDEPTVEDTI--EILKGLRDRYEAHHRINISDEALEA 373 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A + ++++ ++E+E E D Sbjct: 374 AAKLSDRYVSDRFLPDKAID--LID--EASSKVRLKSHTTPSNLKEIE-------QEIDK 422 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + + D A E LR +++ +QY + +N+Q Sbjct: 423 VKNEKDAAVHAQEF-----------------ENAANLRDKQSKLEKQYEDAK-NEWKNAQ 464 Query: 454 CDFDPMKMRMESEIRGL---LKGMEMT 477 D E I + G+ +T Sbjct: 465 GGLDT--ALSEENIAEVIAGWTGIPLT 489 >gi|50955646|ref|YP_062934.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 839 Score = 117 bits (294), Expect = 6e-25 Identities = 34/259 (13%), Positives = 68/259 (26%), Gaps = 42/259 (16%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------- 276 F + + + +I +D + + L+ + + Sbjct: 262 FEERLKKVTKEIRTRGDIITFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTIGATT 321 Query: 277 --KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 + + + FQ + PSL + ++ E V T + Sbjct: 322 LDEYRKHFEKDAALERRFQPIQVNEPSLPHTI--NILKGLRDRYEAHHKVSITDGAIVSA 379 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R + A D L D A L++ P++ + + + + +++ + Sbjct: 380 ANLADRYIQDRFLPDKAID--LID--EAGARLRLSILSAPPELRKFDDKIAVVRSQKEAA 435 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 D K LR E + L L+ Q S Sbjct: 436 IEDQD------------------------FEKAASLRDEEKNLLGERLR--LEKQWRSG- 468 Query: 455 DFDPMKMRMESEIRGLLKG 473 D E I +L Sbjct: 469 DVKTTAEVDEGLIAEVLAQ 487 >gi|38234547|ref|NP_940314.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium diphtheriae NCTC 13129] Length = 883 Score = 117 bits (294), Expect = 6e-25 Identities = 34/257 (13%), Positives = 72/257 (28%), Gaps = 42/257 (16%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------- 276 F + + + +I +D + + + + + Sbjct: 283 FEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATT 342 Query: 277 --KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 + ++ + FQ PS++ ++ E V T + Sbjct: 343 LDEYRKHIEKDAALERRFQPVQVPEPSVDMTI--EILKGLRDRYEAHHRVSITDGALAAA 400 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A+ R A D L D A ++++R I +++ + AE Sbjct: 401 AQLSDRYINDRFLPDKAVD--LID--EAGARMRIKRMTAPESIRKVDDQI----AEVRRE 452 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + A +A+ K LR + E + E + Q S Sbjct: 453 KEAAIDAQ--------------------DFEKAAGLR--DTERKLGEERAEKEKQWRSG- 489 Query: 455 DFDPMKMRMESEIRGLL 471 D + + E +I +L Sbjct: 490 DLEDIAEVGEEQIAEVL 506 >gi|16331384|ref|NP_442112.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp. PCC 6803] Length = 821 Score = 116 bits (292), Expect = 1e-24 Identities = 26/193 (13%), Positives = 57/193 (29%), Gaps = 22/193 (11%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 256 EFEERLKKIMDEIRQAGNIILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 315 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS+E ++ E ++ +E Sbjct: 316 TLDEYRKHIERDAALERRFQPVMVGEPSVEETI--EILYGLRERYEQHHKLKILDEALEA 373 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A + +++ + P +EL+ +R Sbjct: 374 AAKLSDRYISDRFLPDKAID--LID--EAGSRVRLINSQLPPAAKELDKELRQIL----- 424 Query: 394 FQLKADEARREAE 406 + D+A R + Sbjct: 425 --KEKDDAVRNQD 435 >gi|66870181|gb|EAL97546.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Arthrobacter sp. FB24] Length = 830 Score = 116 bits (292), Expect = 1e-24 Identities = 21/179 (11%), Positives = 51/179 (28%), Gaps = 15/179 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------- 276 F + + + +I +D + + ++ + + Sbjct: 264 FEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 323 Query: 277 --KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 + ++ + FQ PS+ + ++ E V T + Sbjct: 324 LDEYRKHIEKDAALERRFQPIQVKEPSVAH--AIEILKGLRDRYEAHHRVTITDGALASA 381 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A L++ R P+++ ++ + + E + Sbjct: 382 ANLSERYISDRFLPDKAID--LID--EAGARLRIRRMTAPPELKAMDERIAELKMEKES 436 >gi|72163275|ref|YP_290932.1| ATPase [Thermobifida fusca YX] Length = 830 Score = 116 bits (290), Expect = 2e-24 Identities = 34/257 (13%), Positives = 74/257 (28%), Gaps = 42/257 (16%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + +I +D + + ++ + + + I Sbjct: 261 FEERLRKVLKEIRSRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 320 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 L+ + FQ + P++ + ++ E V T + Sbjct: 321 LDEYRKYLEKDAALERRFQPIQVEEPTISHTI--EILKGLRDRYEAHHRVSITDGALVAA 378 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A+ R A D L D A + +++ R P + E + + Sbjct: 379 AQLADRYISDRYLPDKAID--LID--EAGSRMRIRRMTAPPDLREFDEKI--------AK 426 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + EA +A+ + LR E+R Q + + + + Sbjct: 427 VRRDKEAAIDAQDF----------------ERAAALRDE--EKRLQAQRAQKEKEWKAG- 467 Query: 455 DFDPMKMRMESEIRGLL 471 D D + E I +L Sbjct: 468 DMDTVAEVNEELIAEVL 484 >gi|228154|prf||1717391A protein Hsp104 Length = 908 Score = 116 bits (290), Expect = 2e-24 Identities = 37/259 (14%), Positives = 75/259 (28%), Gaps = 31/259 (11%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKL-----FWKADELIEKLKSKLIDPLDACNFIL 289 ++ +D + + +D L + + ++ ++ Sbjct: 273 EESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFE 332 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ+ + PS+ ++ EI V+ + A+ R R Sbjct: 333 RRFQKIEVAEPSVRQTVA--ILRGLQPKYEIHHGVRILDSALVTAAQLAKRYLPYRRLPD 390 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXX 409 A D L D +CA + + R K +++ E + D + K+ R E Sbjct: 391 SALD--LVDISCAG--VAVARDSKPEELDSKE-----QSIAIDSSRDKSSRERVECRLHT 441 Query: 410 XXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESE--- 466 + LR EE+ + EEL + + + + E Sbjct: 442 KRKLKLARQKEASLQEELEPLRQRYNEEKHGH--EELTQAKKKLDELENKALVAERRYDT 499 Query: 467 ----------IRGLLKGME 475 I + K +E Sbjct: 500 RTAADLRYFAIPDIKKQIE 518 >gi|41326857|emb|CAF20701.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Corynebacterium glutamicum ATCC 13032] Length = 925 Score = 115 bits (289), Expect = 2e-24 Identities = 34/261 (13%), Positives = 69/261 (26%), Gaps = 46/261 (17%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------- 276 F + + + +I +D + + + + + Sbjct: 284 FEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGELQTIGATT 343 Query: 277 --KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 + ++ + FQ PS++ ++ E V T + Sbjct: 344 LDEYRKHIEKDAALERRFQPVQVPEPSVDLTV--EILKGLRDRYEAHHRVSITDGALTAA 401 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A+ R A D L D A ++++R + E++ + Sbjct: 402 AQLADRYINDRFLPDKAVD--LID--EAGARMRIKRMTAPSSLREVDERI--------AD 449 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + EA +A+ K LR E + L EE +E Sbjct: 450 VRREKEAAIDAQDF----------------EKAAGLRDKE-----RKLGEERSEKEKQWR 488 Query: 455 DFDPM--KMRMESEIRGLLKG 473 D E +I +L Sbjct: 489 SGDLEDIAEVGEEQIAEVLAN 509 >gi|13357952|ref|NP_078226.1| ATP-dependent serine proteinase - heat shock protein [Ureaplasma parvum serovar 3 str. ATCC 700970] Length = 704 Score = 115 bits (289), Expect = 2e-24 Identities = 30/269 (11%), Positives = 82/269 (30%), Gaps = 25/269 (9%) Query: 224 FVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + +I + + ++ + + KLI Sbjct: 106 FEERINSILKEVKKADGNIILFIDEIHQIVGMGRNQGSNMDVANILKPMMARGEIKLIGA 165 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + F + + P+++ ++ E ++ + Sbjct: 166 TTLDEYRLYIEKDQALERRFTKVLVNKPTIQET--LTIMRGLKPRWEAFHGIKIHDNALI 223 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R A D L D A +K + + ++E++ ++ Q E Sbjct: 224 AAVNLSERYINDRNLPDKAID--LID--EAAAKIKTQINSQPIYLDEIKRDLQHLQTEKA 279 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE-- 450 + + DE + YLK + + + L ++++ + Sbjct: 280 ALEPEKDEKSIKRLNEILEKIKLKQDEFNNLNDLYLKEKKQIDD--LKNLRQKIERIQHD 337 Query: 451 ----NSQCDFDPMKMRMESEIRGLLKGME 475 S+ ++ + S++ K E Sbjct: 338 IEFYQSEGKYEKASRLLYSDLPLFEKQRE 366 >gi|33632641|emb|CAE07453.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 8102] Length = 846 Score = 115 bits (289), Expect = 2e-24 Identities = 33/266 (12%), Positives = 75/266 (28%), Gaps = 40/266 (15%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 259 EFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 318 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ + PS+++ ++ E ++ T + Sbjct: 319 TLDEYRKHIERDAALERRFQPVNVGEPSIDDTI--EILRGLRERYEQHHRLKITDDALVA 376 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A + +++ K P+ +E++ E Sbjct: 377 AATLGDRYISDRFLPDKAID--LID--EAGSRVRLLNSKLPPEAKEVDK-------ELRG 425 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 Q + ++A R+ + K ++LR + + E S Sbjct: 426 VQKQKEDAVRDQD----------FTKAGELREKEVELRDQIRSLLQANRTDATAVAEASA 475 Query: 454 CDFDPMKMRM--------ESEIRGLL 471 D E +I ++ Sbjct: 476 DQSDAPAAESAESSPMVNEEDIAQIV 501 >gi|71675077|ref|ZP_00672823.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Trichodesmium erythraeum IMS101] Length = 825 Score = 115 bits (288), Expect = 3e-24 Identities = 36/259 (13%), Positives = 75/259 (28%), Gaps = 42/259 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 255 EFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 314 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS++ ++ E ++ +E Sbjct: 315 TLDEYRKHIERDAALERRFQPVMVGEPSVDETI--EILYGLRERYEQHHKLKILDTALEA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A + +++ + P +EL+ E Sbjct: 373 AAKLSDRYISDRYLPDKAID--LID--EAGSRVRLINSQLPPAAKELDK-------ELRS 421 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEELKAQENS 452 + DEA R + K +LR E E + + K ++ Sbjct: 422 ILKEKDEAVRSQDFD-----------------KAGELRDREMEIKSEIRSLAQNKKLDS- 463 Query: 453 QCDFDPMKMRMESEIRGLL 471 + D M E +I ++ Sbjct: 464 -TNEDDSPMVTEEDIAHIV 481 >gi|68268640|ref|ZP_00574909.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Moorella thermoacetica ATCC 39073] Length = 840 Score = 114 bits (287), Expect = 4e-24 Identities = 21/180 (11%), Positives = 52/180 (28%), Gaps = 15/180 (8%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------ 276 F + + +I +D + + + + + Sbjct: 287 EFEERFKKVMDEVRAAGNVILFIDELHTLIGAGAAEGAIDAANILKPALARGELQTIGAT 346 Query: 277 ---KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + FQ + P++E ++ E V+ T +E Sbjct: 347 TIDEYRKHIERDAALERRFQAVMVEEPTVEETIA--ILKGLRDRYEAHHRVKITDEALEA 404 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A + ++++ +++LE+ + + E Sbjct: 405 AARLSDRYITDRYLPDKAID--LVD--EAGSRVRLKVYTAPDDVKKLEARLEELEKEKAA 460 >gi|68512803|gb|EAN36605.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Rubrobacter xylanophilus DSM 9941] Length = 834 Score = 114 bits (287), Expect = 4e-24 Identities = 40/267 (14%), Positives = 85/267 (31%), Gaps = 45/267 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + D +I +D + + + + + ++I Sbjct: 263 EFEERLKKIMKEIIDHGDIILFIDEIHNLVGAGAAEGAIDAASILKPALARGEIQVIGAT 322 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P++E E ++ E ++ T + Sbjct: 323 TIDEYRKYVEKDKALERRFQTIQVGEPTVEETEL--ILKGLRERYEEHHKIEITDEALRA 380 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKP---QI-EELESIVRLKQA 389 + R A D L D A + +K++ + P +I +EL + R K+A Sbjct: 381 ASRLGDRYISDRFLPDKAID--LVD--EAASKMKIKTMSQPPYYKEIDDELAEVRRRKEA 436 Query: 390 EADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ 449 D + +EA R + KL L + E RQ+ + + Q Sbjct: 437 AID--SQEYEEAARLRDS-------------------EKKLALRKRELERQWREGKGEEQ 475 Query: 450 ENSQCDFDPMKMRMESEIRGLLKGMEM 476 + + +EI + G+ + Sbjct: 476 RRVSIGENEI-----AEIVSMWTGIPV 497 >gi|71367651|ref|ZP_00658171.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Nocardioides sp. JS614] Length = 861 Score = 114 bits (286), Expect = 4e-24 Identities = 33/257 (12%), Positives = 69/257 (26%), Gaps = 42/257 (16%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + ++ +D + + ++ + + + I Sbjct: 265 FEERLKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 324 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 L+ + FQ PS+ + ++ E V T + Sbjct: 325 LDEYRKYLEKDAALERRFQPIQVAEPSIAHTI--EMLKGLRDRYEAHHRVTITDEALVSA 382 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R A D L D A + L++ R + E + Sbjct: 383 ATLADRYISDRFLPDKAID--LID--EAGSRLRIRRMTAPADLREYDDK-----IGEVRQ 433 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + +A ++ E RL + E++ E + Q + Sbjct: 434 RKEAAIDGQDFE---------------------AAARLRDEEKQLILKKSEREKQWRAG- 471 Query: 455 DFDPMKMRMESEIRGLL 471 D D + E I +L Sbjct: 472 DMDEVAEVDEELIAEVL 488 >gi|55242025|gb|EAL40845.1| ENSANGP00000028094 [Anopheles gambiae str. PEST] Length = 3059 Score = 114 bits (286), Expect = 5e-24 Identities = 27/147 (18%), Positives = 41/147 (27%), Gaps = 28/147 (19%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLC--------MCVICSK-FDFASNTCRWIG 174 R + C L C + G C C C +C K ++ + + Sbjct: 644 RPLICAACLRCKSCGTTNVTKFIGNLPMCTPCFRLRQKGNYCPLCQKCYEDNDFDLKMME 703 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACN-HTSELFGF-VKDVFQH 231 C C W H C + + M + F C C H+S+ +D Sbjct: 704 CGDCRRWVHARCEGLTDEQYNMLSVL-----PENIEFVCKKCAKHSSDSTAHLWRDAVAA 758 Query: 232 CAPNWDFEALIKELDFVRKIFRGSEDA 258 L V K+ S A Sbjct: 759 E--------FKAGLLSVVKLLSKSRQA 777 >gi|55242024|gb|EAA08123.3| ENSANGP00000002662 [Anopheles gambiae str. PEST] Length = 2963 Score = 114 bits (286), Expect = 5e-24 Identities = 27/147 (18%), Positives = 41/147 (27%), Gaps = 28/147 (19%) Query: 127 RNIACQNLLPADDCDCDICSNKKG---FCNLC--------MCVICSK-FDFASNTCRWIG 174 R + C L C + G C C C +C K ++ + + Sbjct: 635 RPLICAACLRCKSCGTTNVTKFIGNLPMCTPCFRLRQKGNYCPLCQKCYEDNDFDLKMME 694 Query: 175 CDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACN-HTSELFGF-VKDVFQH 231 C C W H C + + M + F C C H+S+ +D Sbjct: 695 CGDCRRWVHARCEGLTDEQYNMLSVL-----PENIEFVCKKCAKHSSDSTAHLWRDAVAA 749 Query: 232 CAPNWDFEALIKELDFVRKIFRGSEDA 258 L V K+ S A Sbjct: 750 E--------FKAGLLSVVKLLSKSRQA 768 >gi|71071100|ref|XP_768118.1| heat shock protein [Giardia lamblia ATCC 50803] Length = 882 Score = 114 bits (286), Expect = 5e-24 Identities = 29/275 (10%), Positives = 75/275 (27%), Gaps = 28/275 (10%) Query: 224 FVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + I +D + + + + + + I Sbjct: 255 FEERLKAILDELKKSEGNSILFIDEIHTLIGAGGSKGTSDAANLLKPALARGEIRCIGAT 314 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + + F E P++E+ ++ + ++ T + Sbjct: 315 TTEEYRNHIASDRAFERRFAEVFVAEPNVEDTI--SILRGLSGRYQSHHQIRITDGALVA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R D ++ A +++ + Q++ L Q E + Sbjct: 373 AAQLANRYV--RAMGRHNPDAAIDLLDEAGASVRVTLDSQPAQLDALNRKKLRLQIEEEA 430 Query: 394 FQLK-----ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLF 443 + + AD + + +Y + R +S + R L Sbjct: 431 LRRESEARNADSSISKRLADIIKEISNIDMQIKPLEEQYNRERSSIDKISNIKARITALE 490 Query: 444 EELKAQENSQCDFDPMKMRMESEIRGL---LKGME 475 ++L+ ++ + I L L+ +E Sbjct: 491 DKLEVY-TTRGEVSKAADLQYGAIPELRDELRRLE 524 >gi|23336357|ref|ZP_00121578.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Bifidobacterium longum DJO10A] Length = 869 Score = 114 bits (286), Expect = 5e-24 Identities = 35/260 (13%), Positives = 86/260 (33%), Gaps = 46/260 (17%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + ++ +D + I ++ + + + I Sbjct: 269 FEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQTIGATT 328 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ P++ ++ + E V T ++ Sbjct: 329 TDEYRKYIEKDAALERRFQPIQVHEPTIAETI--EILKGLRSRYENHHHVTITDGALQSA 386 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 AE R + A D L D A L+++R P+++EL+ + A+ Sbjct: 387 AELSSRYIQDRNLPDKAID--LID--EAGARLRIKRLTAPPELKELDEKIAKIAAD---- 438 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 DEA + + + +E ++++ L + K +E+S Sbjct: 439 ---KDEAIKGQDF----------------------EKAAELRDKQEKLEADRKQKEDSWR 473 Query: 455 DFDP-MKMRMESE-IRGLLK 472 + + +KM ++ + I ++ Sbjct: 474 EGESDVKMVVDEDVIAEVIS 493 >gi|26006129|dbj|BAC41407.1| mKIAA0304 protein [Mus musculus] Length = 1744 Score = 114 bits (286), Expect = 6e-24 Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 25/131 (19%) Query: 107 HPNISLSQSSLIEIFLYKRCRNIACQNLLPADDCDCDICSNKK-------GFCNLC---- 155 HP + S +R R+ C + C N C C Sbjct: 331 HP--ACLGPSYPT-RATRRRRHWICSACVRCKSCGATPGKNWDVEWSGDYSLCPRCTELY 387 Query: 156 ----MCVICSK-FDFASNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEML 209 C IC++ ++ + + C C HW H C + + ++ +L Sbjct: 388 EKGNYCPICTRCYEDNDYESKMMQCAQCDHWVHAKCEGLSDEDYEILSGL-----PDSVL 442 Query: 210 FHCIACNHTSE 220 + C C ++ Sbjct: 443 YTCGPCAGATQ 453 >gi|28572245|ref|NP_789025.1| putative Clp-family ATP-binding protease/regulator [Tropheryma whipplei TW08/27] Length = 840 Score = 114 bits (285), Expect = 6e-24 Identities = 26/196 (13%), Positives = 55/196 (28%), Gaps = 21/196 (10%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + +I +D + + L+ + + + I Sbjct: 265 FEERLKKVTKEIRSRGDIIVFIDEIHSLVGAGSAEGAIDAATILKPLLARGELQTIGATT 324 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + + FQ + PS+ ++ E V+ T + Sbjct: 325 LDEYRKNIEKDSALERRFQPVNVSEPSIPMCI--QILKGLRDRYEAHHKVKITDEAIYAA 382 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV------RLKQ 388 R A D L D A L++ Q+ +E + + K Sbjct: 383 VTLSSRYINDRFLPDKAID--LID--EAGARLRLSVLSNPSQLRAVEKKILAVVARKDKA 438 Query: 389 AEADMFQLKADEARRE 404 E F + R+E Sbjct: 439 VEKQDFDKVGELKRKE 454 >gi|68562872|ref|ZP_00602103.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Rubrobacter xylanophilus DSM 9941] Length = 886 Score = 114 bits (285), Expect = 7e-24 Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 27/199 (13%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + + + LI +D + + + + + +I Sbjct: 332 EFEERLKKVIDEIREHSDELIIFIDELHTVVGAGAAEGAMDASNMLKPALARGELHVIGA 391 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ PS+E ++ E V+ + + Sbjct: 392 TTIDEYRKNIEKDAALERRFQPVLVSEPSVEETV--EILTGLKDRYEAHHGVKISEEAIV 449 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 AE R DR L DKA A +K+ + K E+E ++ Sbjct: 450 AAAELSDRYI---------TDRFLPDKAIDLMDQAAARVKLRSRTKPEDAREIEEEIKKL 500 Query: 388 QAEADMFQLKADEARREAE 406 Q E D + A++ RR E Sbjct: 501 QREKDRA-VSAEDYRRAQE 518 >gi|67874974|ref|ZP_00504525.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Clostridium thermocellum ATCC 27405] Length = 818 Score = 114 bits (285), Expect = 7e-24 Identities = 30/242 (12%), Positives = 67/242 (27%), Gaps = 41/242 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + I + + + ++I Sbjct: 257 EFEERLKKALDEIRRAGNVILFIDEMHTIIGAGAAEGAIDASNILKPSLARGEIQVIGAT 316 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P+ E E ++ E V+ T + Sbjct: 317 TIDEYRKHIEKDAALERRFQPILVGEPTKE--EAIEILRGLRDKYEAHHSVKITDEALVA 374 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 R A D L D A + ++++ P ++ LE V + Sbjct: 375 AVNMSDRYITDRFLPDKAID--LID--EAASRVRLKSFTAPPDLKHLEEKV-------ER 423 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + + ++A E R+ + E+R + E+ K + Sbjct: 424 LRKEKEDAIVCQEF-------------------EKAARIRDEEQRLKNELEKAKDSWRQK 464 Query: 454 CD 455 Sbjct: 465 NQ 466 >gi|71149796|ref|ZP_00648718.1| AAA ATPase, central region:Clp, N terminal [Thiomicrospira denitrificans ATCC 33889] Length = 858 Score = 114 bits (285), Expect = 7e-24 Identities = 32/263 (12%), Positives = 72/263 (27%), Gaps = 48/263 (18%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPL 282 F + +I +D + I + + + I Sbjct: 255 EFEDRLKAVIDEVKKSGNVILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGAT 314 Query: 283 D---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + F + D PS+ ++ E V T + Sbjct: 315 TLKEYRKYFEKDMALQRRFLPINLDEPSVNQT--LQILRGIKERLETHHNVTITDSALVA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQ 388 A+ R DR L DKA A +LKM+ + + ++ + + Sbjct: 373 AAKLSDRYI---------ADRFLPDKAIDLIDEAAAELKMQIETEPNVLKSAKIKISELS 423 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR--QYLFEEL 446 E + +++ T + +++ A+E+ + L + Sbjct: 424 VEQEALKME---------------------DSPSNTKRLEEIKKELADEQERVRTLQAQF 462 Query: 447 KAQENSQCDFDPMKMRMESEIRG 469 ++ +K +E++ R Sbjct: 463 SNEKEVFGKISSIKNEIEAKKRE 485 >gi|17132093|dbj|BAB74698.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120] Length = 839 Score = 114 bits (285), Expect = 7e-24 Identities = 31/258 (12%), Positives = 73/258 (28%), Gaps = 40/258 (15%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 271 EFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 330 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS++ ++ E ++ + + Sbjct: 331 TLDEYRKHIERDAALERRFQPVMVGEPSVDETI--EILYGLRDRYEQHHKLKISDEALVA 388 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A + +++ + P +EL+ +R Sbjct: 389 AAKLSDRYISDRYLPDKAID--LVD--EAGSRVRLMNSQLPPAAKELDKELRQIL----- 439 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + D+A R + + +LR E E + + S Sbjct: 440 --KEKDDAVRSQDFD-----------------RAGELRDREMEIKAEIRAIAQSKTNASG 480 Query: 454 CDFDPMKMRMESEIRGLL 471 + + E +I ++ Sbjct: 481 TEGQE-PVVTEEDIAHIV 497 >gi|22294028|dbj|BAC07860.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus elongatus BP-1] Length = 824 Score = 113 bits (284), Expect = 8e-24 Identities = 26/192 (13%), Positives = 57/192 (29%), Gaps = 22/192 (11%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 255 EFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 314 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS+E ++ E ++ + +E Sbjct: 315 TLDEYRKHIERDAALERRFQPVMVGEPSVEETI--EILYGLRERYEKHHKLKISDEALEA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A + +++ + P +EL+ +R Sbjct: 373 AAKLSDRYISDRYLPDKAID--LID--EAGSRVRLINSQLPPAAKELDRELRQ------- 421 Query: 394 FQLKADEARREA 405 + D+A R Sbjct: 422 VLKEKDDAVRAQ 433 >gi|4105131|gb|AAD02267.1| ClpC protease [Spinacia oleracea] Length = 891 Score = 113 bits (284), Expect = 9e-24 Identities = 37/262 (14%), Positives = 81/262 (30%), Gaps = 42/262 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D V + + + + I Sbjct: 347 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDRANILKPRFRRGELQCIGAT 406 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P+++ ++ EI ++ T + Sbjct: 407 TLDEYRKHIEKDPALERRFQPVKVPEPTVDETI--QILKGLRERYEIHHKLRYTDEALVA 464 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ + A D L D A + + +++LES + + E Sbjct: 465 AAQLSYQYISDRFLPDKAID--LID--EAGSRV------LPSSLKKLESWL-QHEKELRQ 513 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ--YLFEELKAQEN 451 + +EA R + K +LR E + + Q L E+ K Sbjct: 514 LTKEKNEAVRGQDF-----------------EKAGELRDREMDLKAQISALVEKKKEMSK 556 Query: 452 SQCD-FDPMKMRMESEIRGLLK 472 ++ + D M ES+I+ ++ Sbjct: 557 AETEAGDVGPMVTESDIQHIVS 578 >gi|50554163|ref|XP_504490.1| hypothetical protein [Yarrowia lipolytica] Length = 887 Score = 113 bits (284), Expect = 9e-24 Identities = 33/263 (12%), Positives = 70/263 (26%), Gaps = 18/263 (6%) Query: 224 FVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKL-----FWKADELIEKLKSK 277 F + + D + +I +D + + + L + + Sbjct: 260 FEERIKGVLKEIEDSKDMIILFIDEIHMLMGDGKGDAANLLKPMLARGSLHCIGATTNEE 319 Query: 278 LIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEE 337 ++ FQ+ D P++ ++ E+ V+ + A+ Sbjct: 320 YRKHVEKDAAFERRFQKIDVREPTIRETVA--ILRGIQNKYELHHGVRILDSALVSAAQL 377 Query: 338 KMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 R + A D L D A + + R + ++ LE + L E + Sbjct: 378 ASRYLTYRKLPDSAVD--LVD--EAAAAVAVARDSRPEHLDSLERELDLLMIEVKALERD 433 Query: 398 --ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE----ERRQYLFEELKAQEN 451 AD+ +E + + R E + + E Sbjct: 434 QHADQGTKERLDAAKHRVADIEEELGPLRETFERERAGHVELNNLKHKVDELETKALDAE 493 Query: 452 SQCDFDPMKMRMESEIRGLLKGM 474 + D I L K + Sbjct: 494 RRRDTSTAADLRYFAIPDLKKRI 516 >gi|67985140|gb|EAM73105.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Kineococcus radiotolerans SRS30216] Length = 840 Score = 113 bits (283), Expect = 1e-23 Identities = 26/196 (13%), Positives = 57/196 (29%), Gaps = 19/196 (9%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + ++ +D + + ++ + + + + Sbjct: 264 FEERLKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTVGATT 323 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ PSL + ++ E V T + Sbjct: 324 LDEFKKYIEKDPALERRFQPIQVPEPSLPH--AIEILKGLRDRYEAHHRVTITDGALVAA 381 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV----RLKQAE 390 A R A D L D A L++ R P + E + + R K++ Sbjct: 382 ATMADRYINDRYLPDKAID--LID--EAGARLRIRRMTAPPDLREFDERIADVRREKESA 437 Query: 391 ADMFQLKADEARREAE 406 D + + R+ E Sbjct: 438 IDAQDFEKAASLRDKE 453 >gi|62639360|ref|XP_341830.2| PREDICTED: similar to mixed lineage leukemia 2 [Rattus norvegicus] Length = 3202 Score = 113 bits (282), Expect = 2e-23 Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 25/131 (19%) Query: 107 HPNISLSQSSLIEIFLYKRCRNIACQNLLPADDCDCDICSNKK-------GFCNLC---- 155 HP + S +R R+ C + C N C C Sbjct: 1764 HP--ACLGPSYPT-RATRRRRHWICSACVRCKSCGATPGKNWDVEWSGDYSLCPRCTELY 1820 Query: 156 ----MCVICSK-FDFASNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEML 209 C IC++ ++ + + C C HW H C + + ++ +L Sbjct: 1821 EKGNYCPICTRCYEDNDYESKMMQCAQCDHWVHAKCEGLSDEDYEILSGL-----PDSVL 1875 Query: 210 FHCIACNHTSE 220 + C C ++ Sbjct: 1876 YTCGPCAGATQ 1886 >gi|6466400|gb|AAF12982.1| unknown; Clp protease ATP binding subunit [Cyanidium caldarium] Length = 854 Score = 113 bits (282), Expect = 2e-23 Identities = 26/225 (11%), Positives = 61/225 (27%), Gaps = 22/225 (9%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + + + +I +D V + + + + Sbjct: 286 EFEERLKKIMDEIRMADNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 345 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + FQ + P++E ++ E ++ + + Sbjct: 346 TLEEYRKHIEKDAALERRFQPVMVEEPTVEETI--EILRGLRDRYEAHHRLKISDSAIVA 403 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ + A D L D A + +++ K P E L+ E Sbjct: 404 AAKLSDQYIADRFLPDKAID--LVD--EASSRVRLMNYKLPPSAEYLDE-------ELRH 452 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER 438 Q +E R + + +K + EE Sbjct: 453 IQKIKNELIRSGDFEEASQFREREIEVKVQMAALMKAKKEAIEEE 497 >AAA_CLPB1_203-397_PF00004.17 Length = 195 Score = 112 bits (281), Expect = 2e-23 Identities = 20/148 (13%), Positives = 43/148 (29%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + D +I +D + + ++ + + Sbjct: 54 EFEERLTAVLKEVTDSEGIIILFIDEMHTVVGAGAVQGSMDAGNLLKTMLARGELRCIGA 113 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 K ++ + FQ+ D P++E+ ++ E+ V+ + + Sbjct: 114 TTLGKYRQYIEKDAALERRFQQVFVDQPTVEDTI--SILRGLKERYEVHHGVRISDNALV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 172 AAAVLSTRYI---------SDRFLPDKA 190 >AAA_CLPB_204-398_PF00004.17 Length = 195 Score = 112 bits (280), Expect = 3e-23 Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D +I +D + + ++ + + + I Sbjct: 54 EFEERLKAVLKEVTDSRGNIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ E+ V+ + + Sbjct: 114 TTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTI--SILRGLKERYEVHHGVKISDSALV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 172 AAATLSTRYISDRFLPSKAID 192 >gi|51894268|ref|YP_076959.1| class III stress response-related ATPase [Symbiobacterium thermophilum IAM 14863] Length = 833 Score = 111 bits (279), Expect = 3e-23 Identities = 30/232 (12%), Positives = 69/232 (29%), Gaps = 39/232 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------ 276 F + + + + +I +D + I + + + Sbjct: 264 EFEERLKKVLEEIRNAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGELQAIGAT 323 Query: 277 ---KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + FQ + PS E+ ++ E V+ T +E Sbjct: 324 TIDEYRKYVEKDAALERRFQPVMVEEPSPED--AIQILKGLRDRYEAHHRVEITDAAIEA 381 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVR--L 386 R DR L DKA A + +++ P ++ELE + Sbjct: 382 AVRLSDRYV---------TDRFLPDKAVDLIDEAASRVRLSTFVAPPNLKELEDKLEEVR 432 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER 438 K+ EA + + ++A R + + + + +++ Sbjct: 433 KEKEAAVQGQEFEKAARLRD------------KETKLKEELERQKNEWQQKK 472 >gi|73663540|ref|YP_302321.1| putative stress response-related Clp ATPase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 820 Score = 111 bits (279), Expect = 3e-23 Identities = 35/269 (13%), Positives = 77/269 (28%), Gaps = 49/269 (18%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + + + + + + I Sbjct: 256 EFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGAT 315 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D P++E+ ++ E + + + Sbjct: 316 TLDEYRKNIEKDAALERRFQPVQVDEPTVEDTI--EILKGLRDRYEAHHRINISDEALVS 373 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A + ++++ P ++E+E +Q E Sbjct: 374 AAKLSHRYVSDRFLPDKAID--LID--EASSKVRLKSHTTPPNLKEIE-----QQIEQ-- 422 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE--ELKAQEN 451 + + D A E LR + + +QY K +N Sbjct: 423 VKNEKDAAVHAQEF-----------------ENAANLRDKQTKLEKQYEEANTNWKNTQN 465 Query: 452 SQCDFDPMKMRMESEIRGL---LKGMEMT 477 E +I + G+ +T Sbjct: 466 GDNT-----SLSEEDIGEVIAGWTGIPLT 489 >gi|399213|sp|P31542|CLAB_LYCES ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplast precursor Length = 923 Score = 111 bits (279), Expect = 4e-23 Identities = 34/262 (12%), Positives = 83/262 (31%), Gaps = 42/262 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D V + + + + + I Sbjct: 348 EFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 407 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P+++ ++ EI ++ T + Sbjct: 408 TLDEYRKHIEKDPALERRFQPVKVPEPTVDETI--QILKGLRERYEIHHKLRYTDEDLVA 465 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ + A D L D A + +++ + + +ELE +R Sbjct: 466 AAQLSYQYISDRFLPDKAID--LID--EAGSRVRLRHAQLPEEAKELEKELRQI------ 515 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ--YLFEELKAQEN 451 + +EA R + K +LR E + + Q L ++ K Sbjct: 516 -TKEKNEAVRGQDF-----------------EKAGELRDREMDLKAQITALIDKNKEVSK 557 Query: 452 SQCD-FDPMKMRMESEIRGLLK 472 ++ + D + E++I+ ++ Sbjct: 558 AESEAADTGPLVTEADIQHIVS 579 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 111 bits (278), Expect = 4e-23 Identities = 16/132 (12%), Positives = 38/132 (28%), Gaps = 20/132 (15%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDACNFI 288 ++I +D + + + + + + + ++ + Sbjct: 70 EGSIILFIDEMHTLVGAGKGDGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDAAL 129 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ P++E+ ++ E+ V+ + + A R Sbjct: 130 ARRFQPVFVSEPTVEDTV--SILRGLKEKYEVHHGVRISDSAIVAAATLSNRYI------ 181 Query: 349 LDACDRELEDKA 360 DR L DKA Sbjct: 182 ---ADRFLPDKA 190 >gi|33240557|ref|NP_875499.1| ATPase with chaperone activity ATP-binding subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 856 Score = 111 bits (278), Expect = 4e-23 Identities = 26/193 (13%), Positives = 59/193 (30%), Gaps = 22/193 (11%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 257 EFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 316 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS+E+ ++ E ++ T + Sbjct: 317 TLDEYRKHIERDAALERRFQPVMIGEPSIEDTI--EILKGLRERYEQHHRLKITDEALNA 374 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A + +++ K P+ ++++ E Sbjct: 375 AANLGDRYISDRFLPDKAID--LID--EAGSRVRLLNSKLPPEAKQVDK-------ELRK 423 Query: 394 FQLKADEARREAE 406 Q + +EA R+ + Sbjct: 424 VQKEKEEAVRDQD 436 >AAA_CLPB1_203-399_PF00004.17 Length = 197 Score = 111 bits (278), Expect = 4e-23 Identities = 17/143 (11%), Positives = 41/143 (28%), Gaps = 14/143 (9%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGS--EDARGKKLFWKADELIEKLKSKLI 279 F + + +I +D V + E + ++ + + + I Sbjct: 54 EFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAGNLLKPMLARGELRCI 113 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ+ PS+++ ++ E+ V+ T Sbjct: 114 GATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTI--SILRGLKEKYEVHHGVKITDSA 171 Query: 331 MEVVAEEKMRMFKKARSVLDACD 353 + A R + A D Sbjct: 172 LVAAATLSHRYIQDRFLPDKAID 194 >gi|33861644|ref|NP_893205.1| ClpC [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 842 Score = 111 bits (278), Expect = 4e-23 Identities = 30/246 (12%), Positives = 73/246 (29%), Gaps = 38/246 (15%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 257 EFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 316 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS+ + ++ E ++ T +E Sbjct: 317 TLDEYRKHIERDAALERRFQPVMVGEPSIADTI--EILKGLRERYEQHHRLKITDNALEA 374 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A + +++ K P+ ++++ +R Sbjct: 375 AAHLGDRYISDRFLPDKAID--LID--EAGSRVRLINSKLPPEAKQIDKELRQ------- 423 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 Q + +E+ R+ + L+ + E + + L E K + + + Sbjct: 424 VQKQKEESVRDQ---------------NFDQAGVLREKEIELSAKIKELLEN-KKESSEK 467 Query: 454 CDFDPM 459 + Sbjct: 468 NEISNA 473 >gi|23481616|gb|EAA17840.1| Bromodomain, putative [Plasmodium yoelii yoelii] Length = 4805 Score = 111 bits (278), Expect = 4e-23 Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 28/126 (22%) Query: 111 SLSQSSLIEIFLYKRCRNIACQNLLPADDCD----CDICSNKKGFCNLCM---------- 156 S ++ +I+L+ N C + L CD C I N+ C Sbjct: 1381 SCCFPNVPDIYLF----NWKCDDCLKCSKCDYSNLCFINYNEWELHLDCCINCYKEYEKK 1436 Query: 157 --CVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGL-IKMGHSAKGASGMTEMLFHCI 213 C+IC++ ++ +W+ CDVC W H C E I+ + + C Sbjct: 1437 NFCIICNEKYKVDDSNKWVECDVCKFWIHLSCDKDEDRNIETLAIKH-------INYKCP 1489 Query: 214 ACNHTS 219 C S Sbjct: 1490 TCRSGS 1495 >gi|5123787|emb|CAB45385.1| trithorax homologue 2 [Homo sapiens] Length = 2715 Score = 111 bits (278), Expect = 4e-23 Identities = 21/131 (16%), Positives = 40/131 (30%), Gaps = 25/131 (19%) Query: 107 HPNISLSQSSLIEIFLYKRCRNIACQNLLPADDCDCDICSNKK-------GFCNLC---- 155 HP + S ++ R+ C + C N C C Sbjct: 1276 HP--ACLGPSYPT-RATRKRRHWICSACVRCKSCGATPGKNWDVEWSGDYSLCPRCTQLY 1332 Query: 156 ----MCVICSK-FDFASNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEML 209 C IC++ ++ + + C C HW H C + + ++ +L Sbjct: 1333 EKGNYCPICTRCYEDNDYESKMMQCAQCDHWVHAKCEGLSDEDYEILSGL-----PDSVL 1387 Query: 210 FHCIACNHTSE 220 + C C ++ Sbjct: 1388 YTCGPCAGAAQ 1398 >AAA_CLPB_202-397_PF00004.17 Length = 196 Score = 111 bits (277), Expect = 5e-23 Identities = 18/156 (11%), Positives = 38/156 (24%), Gaps = 32/156 (20%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK----------- 275 D+ A + L V +G+ + ++ Sbjct: 41 DLGSMVAGAKYRGEFEERLKAVLDEIKGANGE-IVTFIDELHTIVGAGASGESAMDAGNM 99 Query: 276 ------------------SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 ++ ++ + FQ+ PS+E+ G ++ Sbjct: 100 IKPLLARGELRLVGATTLNEYRKYIEKDTALERRFQQVYVGEPSVEDTVG--ILRGLKER 157 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACD 353 E+ V+ + AE R A D Sbjct: 158 YEVHHGVRIQDSALVAAAELSHRYITSRFLPDKAID 193 >gi|62423737|ref|ZP_00378894.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Brevibacterium linens BL2] Length = 850 Score = 111 bits (277), Expect = 6e-23 Identities = 25/187 (13%), Positives = 51/187 (27%), Gaps = 19/187 (10%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------- 276 F + + + +I +D + + ++ + + Sbjct: 261 FEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 320 Query: 277 --KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 + ++ + FQ PSL + ++ E V T + Sbjct: 321 LDEYRKHIEKDAALERRFQPIQVPEPSLAH--SIEILKGLRDKYEAHHKVTITEGALSAA 378 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR----LKQAE 390 R A D L D A L++ R +I +LE + K+A Sbjct: 379 VNMSDRYVNDRYLPDKAID--LID--EAGAKLRISRLSVPQEIRDLEEKILEARHRKEAA 434 Query: 391 ADMFQLK 397 D + Sbjct: 435 IDAQDFE 441 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 110 bits (276), Expect = 7e-23 Identities = 19/148 (12%), Positives = 38/148 (25%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + I +D + + + + + + Sbjct: 54 EFEERLKAVLQEVTGSEGTFILFIDEMHTLIGAGKGDGAMDASNLLKPALARGELHCIGA 113 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ PS+E+ ++ E V+ T + Sbjct: 114 TTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTI--SILRGLKDKYEQHHGVRITDSALV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 172 ASATLSNRYI---------TDRFLPDKA 190 >AAA_Q5E7D5_201-395_PF00004.17 Length = 195 Score = 110 bits (276), Expect = 7e-23 Identities = 21/148 (14%), Positives = 45/148 (30%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + ++I +D V + + + + + Sbjct: 54 EFEERLKAVLNELAKEEGSVILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGELHCVGA 113 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D P++E+ ++ EI V+ T + Sbjct: 114 TTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTVA--ILRGLKERYEIHHHVEITDPAIV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR+L DKA Sbjct: 172 AAASLSHRYI---------SDRQLPDKA 190 >gi|70727483|ref|YP_254399.1| endopeptidas Clp ATP-binding chain C [Staphylococcus haemolyticus JCSC1435] Length = 824 Score = 110 bits (276), Expect = 8e-23 Identities = 32/265 (12%), Positives = 73/265 (27%), Gaps = 41/265 (15%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + + + + + + I Sbjct: 256 EFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGAT 315 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D P++E+ ++ E + + +E Sbjct: 316 TLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIA--ILKGLRDRYEAHHRINISDEALEA 373 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ A D L D A + ++++ ++E+E E + Sbjct: 374 AAKLSDCYVSDRFLPDKAID--LID--EASSKVRLKSHTTPNNLKEIE-------QEIEK 422 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE-LKAQENS 452 + + D A E LR + + +QY + Sbjct: 423 VKNEKDAAVHAQEF-----------------ENAANLRDKQTKLEKQYEDAKNEWKTTQG 465 Query: 453 QCDFDPMKMRMESEIRGLLKGMEMT 477 K + I G G+ +T Sbjct: 466 DQSTSLSKEDIGEVIAG-WTGIPLT 489 >gi|72382499|ref|YP_291854.1| ATPase [Prochlorococcus marinus str. NATL2A] Length = 855 Score = 110 bits (276), Expect = 8e-23 Identities = 26/192 (13%), Positives = 58/192 (30%), Gaps = 22/192 (11%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 257 EFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 316 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS+++ ++ E ++ T ++ Sbjct: 317 TLDEYRKHIERDAALERRFQPVMIGEPSIKDTI--EILKGLRERYEQHHRLKITDEALDA 374 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A + +++ K P+ +E++ E Sbjct: 375 AANLGDRYISDRFLPDKAID--LID--EAGSRVRLLNSKLPPEAKEVDK-------ELRK 423 Query: 394 FQLKADEARREA 405 Q +EA R+ Sbjct: 424 IQKSKEEAVRDQ 435 >gi|62734176|gb|AAX96285.1| Clp amino terminal domain, putative [Oryza sativa (japonica cultivar-group)] Length = 932 Score = 110 bits (276), Expect = 8e-23 Identities = 27/203 (13%), Positives = 58/203 (28%), Gaps = 27/203 (13%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I LD V + + + + + I Sbjct: 357 EFEERLKKLMDEVKQNGEIILFLDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGAT 416 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P+++ G ++ EI VQ T + Sbjct: 417 TIDEYRKHIEKDPALERRFQPVKVPEPTVDETIG--ILKGLRERYEIHHKVQYTDESLIA 474 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQ-----------IEELES 382 A + A D L D+A ++ L+ + + + E Sbjct: 475 AARLSYQYISDRFLPDKAID--LVDEAGSLVRLRNAQ--LPDEAKELEKKLKKIMAEKSE 530 Query: 383 IVRLKQAEAD-MFQLKADEARRE 404 +R + E + + E + E Sbjct: 531 AIRSQDFEKAGALRGEEVELKSE 553 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 110 bits (275), Expect = 8e-23 Identities = 21/148 (14%), Positives = 44/148 (29%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + + +I +D + + + + + + Sbjct: 54 EFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGA 113 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D PS+E+ ++ EI V T + Sbjct: 114 TTLDEYRQYIEKDAALERRFQKVFVDEPSVEDTIA--ILRGLKERYEIHHHVDITDPAIV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR+L DKA Sbjct: 172 AAATLSHRYI---------SDRQLPDKA 190 >AAA_Q5X4G2_201-395_PF00004.17 Length = 195 Score = 110 bits (275), Expect = 9e-23 Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 20/135 (14%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDAC 285 +I +D + + + + + + I ++ Sbjct: 67 AKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKD 126 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D PS+E+ ++ E+ V+ T + A R Sbjct: 127 AALERRFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVEITDPALVAAAMLSHRYI--- 181 Query: 346 RSVLDACDRELEDKA 360 DR+L DKA Sbjct: 182 ------SDRQLPDKA 190 >gi|61869994|ref|XP_582097.1| PREDICTED: similar to Myeloid/lymphoid or mixed-lineage leukemia protein 4 (Trithorax homolog 2), partial [Bos taurus] Length = 1524 Score = 110 bits (275), Expect = 1e-22 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 25/130 (19%) Query: 107 HPNISLSQSSLIEIFLYKRCRNIACQNLLPADDCDCDICSNKK-------GFCNLC---- 155 HP + S ++ R+ C + C N C C Sbjct: 677 HP--ACLGPSYPT-RATRKRRHWICSACVRCKSCGATPGKNWDVEWSGDYSLCPRCTQLF 733 Query: 156 ----MCVICSK-FDFASNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEML 209 C IC++ ++ + + C C HW H C + + ++ +L Sbjct: 734 EKGNYCPICTRCYEDNDYESKMMQCAQCDHWVHAKCEGLSDEDYEILSGL-----PDSVL 788 Query: 210 FHCIACNHTS 219 + C C + Sbjct: 789 YTCGPCAGAT 798 >gi|33640781|emb|CAE21236.1| ClpC [Prochlorococcus marinus str. MIT 9313] Length = 859 Score = 110 bits (275), Expect = 1e-22 Identities = 32/253 (12%), Positives = 70/253 (27%), Gaps = 44/253 (17%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 257 EFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 316 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS+ ++ E ++ T ++ Sbjct: 317 TLDEYRKHIERDAALERRFQPVMVGEPSIAETI--EILQGLRERYEQHHRLKITDEALDA 374 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A + +++ K P +E++ E Sbjct: 375 AANLGDRYISDRFLPDKAID--LID--EAGSRVRLLNSKLPPAAKEVDK-------ELRK 423 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 Q + ++A R+ + + E E+ L E+++ S Sbjct: 424 VQKEKEDAVRDQDFA----------------------KAGELREKEVELREKIRTLLQSS 461 Query: 454 CDFDPMKMRMESE 466 E+E Sbjct: 462 RQGSEESPPAEAE 474 >gi|71893457|ref|YP_278903.1| ATP-dependent protease binding protein [Mycoplasma hyopneumoniae J] Length = 727 Score = 110 bits (275), Expect = 1e-22 Identities = 41/273 (15%), Positives = 85/273 (31%), Gaps = 40/273 (14%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLID 280 F K + + +I +D + + GS ++ + + KLI Sbjct: 136 EFEKRIKAILQEIEQNSDQVIIFIDEIHLLIGTGSSGTDSMDFANILKPIMARGQIKLIG 195 Query: 281 P---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q+ + PS+ + ++ E V+ + Sbjct: 196 ATTNSEYRLYIEKDGALERRMQKVEILEPSVIDTI--NILRGIKERLENFHQVKIKDSAL 253 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRL 386 + R DR L DKA A LK+E + ++E+ + + Sbjct: 254 VFATKAANRYI---------FDRFLPDKAIDLVDEAAASLKVEINYQPEKLEKAKRELIY 304 Query: 387 KQAEADMFQLK-ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFE 444 + E Q + E + + E ++ + + S +E E Sbjct: 305 LKMEEINSQKQDNSELKSKIE--------NLENEVKKLQDQWDQSKKSASEIASLSQELE 356 Query: 445 ELKAQEN---SQCDFDPMKMRMESEIRGLLKGM 474 +LK Q+N Q D+ +I + K + Sbjct: 357 KLKYQQNYLMEQGDYQKAAEIKYGKIPKISKKL 389 >gi|62734225|gb|AAX96334.1| Clp amino terminal domain, putative [Oryza sativa (japonica cultivar-group)] Length = 959 Score = 110 bits (275), Expect = 1e-22 Identities = 27/203 (13%), Positives = 58/203 (28%), Gaps = 27/203 (13%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I LD V + + + + + I Sbjct: 384 EFEERLKKLMDEVKQNGEIILFLDEVHTLVGAGAAEGAIDAANILKPALARGELQCIGAT 443 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P+++ G ++ EI VQ T + Sbjct: 444 TIDEYRKHIEKDPALERRFQPVKVPEPTVDETIG--ILKGLRERYEIHHKVQYTDESLIA 501 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQ-----------IEELES 382 A + A D L D+A ++ L+ + + + E Sbjct: 502 AARLSYQYISDRFLPDKAID--LVDEAGSLVRLRNAQ--LPDEAKELEKKLKKIMAEKSE 557 Query: 383 IVRLKQAEAD-MFQLKADEARRE 404 +R + E + + E + E Sbjct: 558 AIRSQDFEKAGALRGEEVELKSE 580 >gi|73749097|ref|YP_308336.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Dehalococcoides sp. CBDB1] Length = 812 Score = 110 bits (275), Expect = 1e-22 Identities = 31/262 (11%), Positives = 76/262 (29%), Gaps = 44/262 (16%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + I Sbjct: 255 EFEERLKAVMDEVRQSAGEIILFIDEIHTVVGAGAAEGAIDASNMLKPALSRGELQTIGA 314 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ + P++E ++ E ++ + +E Sbjct: 315 TTLDDYRKYIEKDTALERRFQPVYVEEPTVEQTI--EILKGIRPKYETHHKLKISDAALE 372 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + + A D L D A + L+++ + P++++LE+ R E + Sbjct: 373 AAVRLSSRYITERQLPDKAID--LID--EAASKLRLDSESAPPEVKKLENEFRQAGIEEE 428 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENS 452 D ++ ++ E+ E LK ++ + Sbjct: 429 AASQLQD---------------------YEKAAELKAEKIRLEEKFNTAREEWLKQEKIA 467 Query: 453 QCDFDPMKMRMESEIRGLLKGM 474 + D I L+ M Sbjct: 468 EEVTDKQ-------ITELVSSM 482 >gi|29606248|dbj|BAC70311.1| putative ATP-dependent Clp protease [Streptomyces avermitilis MA-4680] Length = 842 Score = 109 bits (274), Expect = 1e-22 Identities = 23/170 (13%), Positives = 48/170 (28%), Gaps = 15/170 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + +I +D + + ++ + + + I Sbjct: 262 FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 321 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 L+ + FQ PSL + ++ E V T + Sbjct: 322 LDEYKKYLEKDAALERRFQPIQVAEPSLPHTI--EILKGLRDRYEAHHRVSITDEALVQA 379 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV 384 A R A D L D A + +++ R P + E + + Sbjct: 380 ATLADRYVSDRFLPDKAID--LID--EAGSRMRIRRMTAPPDLREFDEKI 425 >AAA_CLPB_200-394_PF00004.17 Length = 195 Score = 109 bits (274), Expect = 1e-22 Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + + +I +D + + + + + + Sbjct: 54 EFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGA 113 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ P++E+ ++ EI VQ T + Sbjct: 114 TTLDEYRQYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKERYEIHHHVQITDPAIV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR+L DKA Sbjct: 172 AAATLSHRYV---------SDRQLPDKA 190 >AAA_CLPB_202-401_PF00004.17 Length = 200 Score = 109 bits (274), Expect = 1e-22 Identities = 21/153 (13%), Positives = 44/153 (28%), Gaps = 16/153 (10%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + L+ + + +LI Sbjct: 54 EFEERLKAVLNEIKSAEGQIITFIDELHTVVGAGASEGSMDASNMLKPLLARGELRLIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ PS+E+ ++ E V+ T + Sbjct: 114 TTLDEYREHIEKDPALERRFQQVYVGEPSVEDTVA--ILRGLRERYEAHHKVRITDSALV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 A+ R + A D L D A + Sbjct: 172 AAAQLSHRYITGRQLPDKAID--LVD--EAASR 200 >AAA_Q5H380_238-432_PF00004.17 Length = 195 Score = 109 bits (274), Expect = 1e-22 Identities = 19/149 (12%), Positives = 43/149 (28%), Gaps = 26/149 (17%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 L + D+ + +I +D + + + + + + I Sbjct: 59 LKAVLSDLSKTE------GQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIG 112 Query: 281 P---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + FQ+ P++E+ ++ + V+ T + Sbjct: 113 ATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKERYAVHHGVEITDPAI 170 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR+L DKA Sbjct: 171 VAAATLSNRYI---------TDRQLPDKA 190 >AAA_CLPB_193-386_PF00004.17 Length = 194 Score = 109 bits (273), Expect = 1e-22 Identities = 18/140 (12%), Positives = 39/140 (27%), Gaps = 11/140 (7%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + LI Sbjct: 54 EFEERLKAVIQETVQSAGQIILFIDEIHTVVGAGKAEGAVDAGNMLKPALARGELHLIGA 113 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D PSLE ++ E+ V+ + + Sbjct: 114 TTLDEYREIEKDPALERRFQPVFVDEPSLEETV--SILRGIKEKYEVHHGVRISDPALIA 171 Query: 334 VAEEKMRMFKKARSVLDACD 353 A+ R + A D Sbjct: 172 AAQLSHRYIADRKLPDKAID 191 >gi|75760630|ref|ZP_00740659.1| Negative regulator of genetic competence clpC/mecB [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 811 Score = 109 bits (273), Expect = 1e-22 Identities = 39/267 (14%), Positives = 82/267 (30%), Gaps = 45/267 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + +I +D + + + + + + I Sbjct: 257 EFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGAT 316 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D PSLE E ++ E V T ++ Sbjct: 317 TLDEYRKYIEKDAALERRFQPIHVDEPSLE--ESIQILKGLRDRYEAHHRVSITDDAIDA 374 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 + R A D L D A + +++ P ++ELE V+L++ Sbjct: 375 AVKLSDRYITDRFLPDKAID--LID--EAASKVRLRSYTTPPNLKELE--VKLEEI---- 424 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + + D A + E L + E+R + E+ K Q Q Sbjct: 425 -RKEKDAAVQSQEF-------------------EKAASLRDMEQRLREKLEDTKRQWKEQ 464 Query: 454 CDFDPMKMRMESEIRGL---LKGMEMT 477 + ++ +E +I + + ++ Sbjct: 465 QGKENSEVTVE-DIANVVSTWTRIPVS 490 >AAA_Q5NE82_201-395_PF00004.17 Length = 195 Score = 109 bits (273), Expect = 2e-22 Identities = 20/147 (13%), Positives = 44/147 (29%), Gaps = 21/147 (14%) Query: 224 FVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSK----- 277 F + + + +I +D + + + + + + K Sbjct: 55 FEERLKSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGAT 114 Query: 278 ----LIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + FQ+ D P++E+ ++ E+ V T + Sbjct: 115 TLDEYREYVEKDPALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHGVNITDSAIVS 172 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR+L DKA Sbjct: 173 AATLSHRYI---------TDRQLPDKA 190 >gi|1351069|sp|P49140|SKI_CHICK Ski oncogene (C-ski) Length = 750 Score = 109 bits (273), Expect = 2e-22 Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 28/179 (15%) Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE--- 303 D+ L + + L + L S L F+ M ++ + + +L+ Sbjct: 548 EVAAHSDSHSSGLEAELEHLRQALDSGLDTKEAKEKFLHEVVKMRVKQEEKLNAALQAKR 607 Query: 304 --NGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--- 357 + E FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 608 SLHQELEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQAR 667 Query: 358 -----DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C L+ K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 668 QIRVCDKGCEAGRLR---AKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 721 >gi|39982304|gb|AAR33765.1| clpB protein, putative [Geobacter sulfurreducens PCA] Length = 875 Score = 109 bits (273), Expect = 2e-22 Identities = 37/258 (14%), Positives = 73/258 (28%), Gaps = 34/258 (13%) Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFILMF 291 +I +D + A G + + + S+ + + Sbjct: 291 VILFIDEAHTLIGAGNQAGGGDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARR 350 Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 FQ D PS+E ++ E A V + AE R Sbjct: 351 FQPVKLDEPSVE--TAVLILRGLKDTYEAAHGVTIRDDAVRAAAELSSRYL--------- 399 Query: 352 CDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE-- 404 R+L DKA A +K+ K ++EE E ++ + E + + R E Sbjct: 400 SGRQLPDKAVDLLDTAAARVKLLLTGKPGRVEEAERRIQALEREEAALRRDRLQGRPEDE 459 Query: 405 -AEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRM 463 T+++ + R A E + ++ Sbjct: 460 GRLAVLKEELALLREELAAVTARWHRER-ELAGAVVALRNEAAEGRDAGGDAVGLKMAEP 518 Query: 464 ESEIRGL-----LKGMEM 476 +++ + L +E+ Sbjct: 519 AAKLAEVQGDEPLVRIEV 536 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 109 bits (273), Expect = 2e-22 Identities = 22/148 (14%), Positives = 43/148 (29%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + I + ++ + + LI Sbjct: 54 EFEERLKAVLNEVKKADGQIILFIDELHTIVGAGKTEGSMDAGNLLKPMLARGELHLIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ P++E+ ++ C EI V + Sbjct: 114 TTLDEYRKYMETDKALERRFQKVLVTEPTVEDTI--SILRGLKECFEIHHGVTIHDNALV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 172 AAATLSNRYI---------TDRFLPDKA 190 >AAA_CLPB1_202-396_PF00004.17 Length = 195 Score = 109 bits (272), Expect = 2e-22 Identities = 17/148 (11%), Positives = 41/148 (27%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + + ++ + + + I Sbjct: 54 EFEERLKAVLKEVTTSDGQIVLFIDEIHTVVGAGASGGAMDASNLLKPMLARGELRCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D P++ + ++ E+ V+ + Sbjct: 114 TTLDEHRQHIEKDPALERRFQQVLVDQPTVPDTI--SILRGLKERYEVHHGVRIADSALV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 172 AAAMLSSRYI---------TDRFLPDKA 190 >AAA_CLPB2_203-397_PF00004.17 Length = 195 Score = 109 bits (272), Expect = 2e-22 Identities = 19/148 (12%), Positives = 43/148 (29%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + + ++ + + + I Sbjct: 54 EFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGELRCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ E+ V+ + + Sbjct: 114 TTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTI--SILRGLKERYEVHHGVKISDSSLV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 172 AAATLSSRYI---------SDRFLPDKA 190 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 108 bits (271), Expect = 2e-22 Identities = 20/149 (13%), Positives = 45/149 (30%), Gaps = 26/149 (17%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 L G + D+ ++ +I +D + + + + + + I Sbjct: 59 LKGVLNDLAKNE------GRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIG 112 Query: 281 P---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + FQ+ P++E+ ++ + V+ T + Sbjct: 113 ATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKEKYALHHGVEITDPAI 170 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR+L DKA Sbjct: 171 VAAATLSNRYI---------TDRQLPDKA 190 >gi|31544696|ref|NP_853274.1| Clp [Mycoplasma gallisepticum R] Length = 717 Score = 108 bits (271), Expect = 2e-22 Identities = 32/273 (11%), Positives = 79/273 (28%), Gaps = 28/273 (10%) Query: 224 FVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSE--DARGKKLFWKADELIEKLKSKLID 280 F + + + +I +D + ++ + ++ + + K+I Sbjct: 108 FEERLNKILKEVKNSSGKVILFIDEIHQLVGMGKNSSNSAMDAANILKPMMARGEIKVIG 167 Query: 281 P---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q+ D P+ + E ++ E V+ + Sbjct: 168 ATTIDEYRKYIEKDGALERRMQKILVDEPTKQ--EALTIMRGLRERWEAFHKVRIFDDAL 225 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 E R A D L D A +K P+++ ++ + E Sbjct: 226 VAAVEMSARYISDRYLPDKAID--LID--EAAAKIKTLIHSLPPELDNIKQKIIHLSTEL 281 Query: 392 DMFQLKADE----ARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYL 442 + + E R T K+ + + +++ +E L Sbjct: 282 AALEREKKENHSNVRLGRIEQLKKEIKDFTNKQNELTVKWTQQKTIYECINKLKEEVTNL 341 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 E++ + K+ + EI + +E Sbjct: 342 TAEIERLQAKGEYTQASKL-LYLEIPKRQEEIE 373 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 108 bits (271), Expect = 3e-22 Identities = 18/141 (12%), Positives = 40/141 (28%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + I + ++ + + LI Sbjct: 54 EFEERLKAVLKEIKKSDGQIIMFIDEIHNIVGAGKTEGSMDAGNLLKPMLARGELHLIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ PS+E+ ++ EI V+ + Sbjct: 114 TTLDEYRQYMEKDKALERRFQKVLVAEPSVEDTI--SILRGLKERFEIHHGVRIHDNALV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A+ R A D Sbjct: 172 AAAKLSDRYITDRYLPDKALD 192 >gi|6048269|emb|CAB58126.1| c-ski protein [Oreochromis aureus] Length = 714 Score = 108 bits (271), Expect = 3e-22 Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 28/170 (16%) Query: 260 GKKLFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE-----NGEGGFL 310 L + + L + L S L F+ M ++ + +L+ E FL Sbjct: 538 ESGLESELESLRQALDSGLDSKESKEKFLHEIVKMRVKQEEKLGSALQAKRSLQQELEFL 597 Query: 311 -IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKAC 361 +A ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 598 RVAKKEKLREATEAKRNLRKEIERLRAESEKKMKEANESRIRLKRELEQARQLRVCDKGC 657 Query: 362 AVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L+ K QIE+L+ ++L+ AEAD QL+AD EAR E Sbjct: 658 EAGRLR---AKYSAQIEDLQ--MKLQHAEADREQLRADLLHEREAREHLE 702 >gi|104548|pir||B32575 C-ski protein FB28 - chicken Length = 713 Score = 108 bits (271), Expect = 3e-22 Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 28/179 (15%) Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE--- 303 D+ L + + L + L S L F+ M ++ + + +L+ Sbjct: 511 EVAAHSDSHSSGLEAELEHLRQALDSGLDTKEAKEKFLHEVVKMRVKQEEKLNAALQAKR 570 Query: 304 --NGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--- 357 + E FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 571 SLHQELEFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRIRLKRELEQAR 630 Query: 358 -----DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C L+ K QIE+L+ V+L+ AEAD QL+AD EAR E Sbjct: 631 QIRVCDKGCEAGRLR---AKYSAQIEDLQ--VKLQHAEADREQLRADLMHEREAREHLE 684 >gi|30409234|dbj|BAC76183.1| ATP-dependent clp protease ATP-binding subunit [Cyanidioschyzon merolae] Length = 821 Score = 108 bits (270), Expect = 3e-22 Identities = 26/197 (13%), Positives = 61/197 (30%), Gaps = 17/197 (8%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + + + +I +D V + + + + Sbjct: 255 EFEERLKKVMDEIREVGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 314 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + FQ P+++ ++ E V+ + +E Sbjct: 315 TLEEYRKHIEKDAALERRFQPVMVGEPTVDETI--EILKGLRDRYEEHHRVRISDAALEA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKP-QIEELESIVRLKQAE-- 390 A+ + A D L D+A + L + K ++++ V + E Sbjct: 373 AAKLSSQYIADRYLPDKAID--LIDEAGSRVRLMYYKLPKVTLELDKELREVMRLKDEMI 430 Query: 391 -ADMFQLKADEARREAE 406 D F++ A+ RE E Sbjct: 431 REDHFEIAAELRDREKE 447 >gi|23126880|ref|ZP_00108763.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc punctiforme PCC 73102] Length = 836 Score = 108 bits (270), Expect = 3e-22 Identities = 25/185 (13%), Positives = 51/185 (27%), Gaps = 16/185 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + +I +D + + G + + + + I Sbjct: 276 FEERIKKVVEEVRTVGNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCIGATT 335 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ PS+E ++ E V + Sbjct: 336 LDEYRKHIERDAALERRFQPIMVGEPSVEETV--QILYGLRGAYEQHHKVTILDSALVAA 393 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 AE R A D L D+A + L+ + +EL+ + E + Sbjct: 394 AELSDRYISDRFLPDKAID--LIDEAGSRVRLR---NSQSSPNKELKRELAGVTKEKEAA 448 Query: 395 QLKAD 399 D Sbjct: 449 VRVQD 453 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 108 bits (270), Expect = 3e-22 Identities = 15/128 (11%), Positives = 34/128 (26%), Gaps = 11/128 (8%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 +I +D + + + + + + + ++ Sbjct: 67 AKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 126 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ PS+E+ ++ E+ VQ T + A R Sbjct: 127 AALERRFQKVYVAEPSVEDTIA--ILRGLKERYELHHHVQITDPAIVAAATLSHRYISDR 184 Query: 346 RSVLDACD 353 A D Sbjct: 185 MLPDKAID 192 >gi|68070837|ref|XP_677332.1| SET-domain protein, putative [Plasmodium berghei] Length = 1439 Score = 108 bits (270), Expect = 4e-22 Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 28/126 (22%) Query: 111 SLSQSSLIEIFLYKRCRNIACQNLLPADDCD----CDICSNKKGFCNLCM---------- 156 S ++ +I+L+ N C + L CD C I N+ C Sbjct: 1013 SCCYPNVPDIYLF----NWKCDDCLKCSKCDYSNLCFINYNEWELHLDCCINCYKEYEKK 1068 Query: 157 --CVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGL-IKMGHSAKGASGMTEMLFHCI 213 C+IC++ ++ +W+ CDVC W H C E I+ + + C Sbjct: 1069 NFCIICNEKYKVDDSNKWVECDVCKFWIHLSCDKDEDRNIETLAIKH-------INYKCP 1121 Query: 214 ACNHTS 219 C S Sbjct: 1122 TCRSGS 1127 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 108 bits (270), Expect = 4e-22 Identities = 20/147 (13%), Positives = 39/147 (26%), Gaps = 21/147 (14%) Query: 224 FVKDVFQHCAPNWDFEAL-IKELDFVRKIFRGSEDARGKKLFWKA--DELIEKLKS---- 276 F + + D + I +D + + + L+ Sbjct: 55 FEERLKSVLREVKDSDGKVILFIDELHLVVGAGNAEGSADAANLLKPELARGALRCIGAT 114 Query: 277 ---KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + FQ P++E+ ++ E V+ T + Sbjct: 115 TLDEYRQHIEKDAALERRFQPVFVGEPNVEDTVA--ILRGLKPRYESHHGVRITDSALVA 172 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 173 AANLSDRYI---------ADRFLPDKA 190 >AAA_Q8X1A0_131-325_PF00004.17 Length = 195 Score = 108 bits (270), Expect = 4e-22 Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 26/149 (17%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---- 276 L +KD+ +H +I +D + + + + + + Sbjct: 59 LKAVLKDLAKHE------GEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVG 112 Query: 277 -----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 + ++ + FQ+ D PS+E+ ++ E+ V+ + Sbjct: 113 ATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVKILDSAI 170 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKA 360 A+ R DR+L DKA Sbjct: 171 IAAAKMSHRYI---------TDRQLPDKA 190 >AAA_Q5LND5_201-395_PF00004.17 Length = 195 Score = 108 bits (270), Expect = 4e-22 Identities = 17/131 (12%), Positives = 37/131 (28%), Gaps = 20/131 (15%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + + + + + + I ++ + Sbjct: 71 GEIILFIDEMHTLVGAGKSDGAMDAANLIKPALARGELHCIGATTLDEYRKYVEKDAALA 130 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ + P++E+ ++ E+ V + + A R Sbjct: 131 RRFQPVLVEEPTVEDTI--SILRGIKEKYELHHGVDISDSALVAAATLSHRYI------- 181 Query: 350 DACDRELEDKA 360 DR L DKA Sbjct: 182 --TDRFLPDKA 190 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 108 bits (269), Expect = 4e-22 Identities = 14/141 (9%), Positives = 39/141 (27%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + + ++ + + + I Sbjct: 54 EFEERLKAVLKEVTSSQGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGELRCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ PS+E+ ++ E+ V+ + + Sbjct: 114 TTINEHRQHIEKDPALERRFQQVLISEPSIEDTI--SILRGLKEKYEVHHGVRISDSALV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A R + A D Sbjct: 172 AAAVLSNRYISERYLPDKAID 192 >gi|67677719|ref|ZP_00474444.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chromohalobacter salexigens DSM 3043] Length = 889 Score = 108 bits (269), Expect = 5e-22 Identities = 34/254 (13%), Positives = 63/254 (24%), Gaps = 26/254 (10%) Query: 230 QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLD------ 283 +I +D + A + + + + I Sbjct: 296 VIEETRRSLHPIILFIDEAHTLIGSGGQAGQGDAANLLKPALARGELRTIAATTWAEFKK 355 Query: 284 ---ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMR 340 + FQ + P+ ++ + + V + R Sbjct: 356 YFEKDAALARRFQVVKVEEPAEP--VAINMLRGLNERMQDHHKVTILDDAIVQAVRLSHR 413 Query: 341 MFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ 395 R+L DKA A + + + + +E+ V +E + Q Sbjct: 414 YI---------TGRQLPDKAVSVLDTACARVALAQSSQPAALEDAYRRVDNLNSEIAVLQ 464 Query: 396 LKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD 455 + E AE + R E R + L E +A E Q Sbjct: 465 REQREGSDHAETLAALDEQLTATQGEIDDLRARWEREQEIVTRLKALEAEREAIEAGQQS 524 Query: 456 FD-PMKMRMESEIR 468 D R E+R Sbjct: 525 GDVDALSRQIGEVR 538 >AAA_Q5L1U6_202-396_PF00004.17 Length = 195 Score = 108 bits (269), Expect = 5e-22 Identities = 16/141 (11%), Positives = 38/141 (26%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + I ++ + + + I Sbjct: 54 EFEERLRAVLNEIKKSEGRIILFIDELHTIVGAGRAEGAIDAGNMLKPMLARGELRCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ P++E+ ++ E+ V+ R + Sbjct: 114 TTLDEYRQYIEKDPALERRFQQVLVQEPTVEDTI--SILRGLKERYEVHHGVKIHDRALV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 172 AAAVLSDRYISDRFLPDKAID 192 >gi|68209073|ref|ZP_00561139.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Desulfitobacterium hafniense DCB-2] Length = 826 Score = 108 bits (269), Expect = 5e-22 Identities = 33/252 (13%), Positives = 71/252 (28%), Gaps = 51/252 (20%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + + + + + + I Sbjct: 264 EFEERLKKVMEEIRVDGRIIVFIDELHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 323 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P++E + ++ E Q T +E Sbjct: 324 TLDEYRKYIEKDPALERRFQPITVGEPTVE--QAVQILLGLRDRYEAHHRTQITDEAVEA 381 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQ 388 + R DR L DKA A + +++ P ++ LE + + Sbjct: 382 AVKMSDRYI---------SDRFLPDKAIDLMDEAASRVRLAAFTAPPDLKSLEEKIEALK 432 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 +E + L + K K R E + R + +L+ Sbjct: 433 SEKEAAVLGQE------------------------FEKAAKFRDEEHQLREE--LAQLRN 466 Query: 449 QENSQCDFDPMK 460 S+ D + Sbjct: 467 TWESKRDISQSQ 478 >AAA_Q5NML2_204-398_PF00004.17 Length = 195 Score = 107 bits (268), Expect = 5e-22 Identities = 13/124 (10%), Positives = 33/124 (26%), Gaps = 11/124 (8%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFIL 289 +I +D + + + + + + ++ ++ + Sbjct: 71 GQIILFIDEMHTLIGAGKSDGAMDAGNLLKPALARGELHCIGATTLAEYQKYVEKDPALQ 130 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ P++E+ ++ E V+ T + A R Sbjct: 131 RRFQPVYVGEPTVEDTI--SILRGLKEKYEAHHGVRITDAALVSAATLSNRYITNRFLPD 188 Query: 350 DACD 353 A D Sbjct: 189 KAID 192 >gi|23612374|ref|NP_703954.1| SET-domain protein, putative [Plasmodium falciparum 3D7] Length = 6761 Score = 107 bits (268), Expect = 5e-22 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 26/122 (21%) Query: 111 SLSQSSLIEIFLYKRCRNIACQNLLPADDCD----CDICSNKKGFCNLCM---------- 156 S ++ +I+L+ N C + L + C+ C I N+ C Sbjct: 1706 SCCFPNVPDIYLF----NWKCDDCLKCNKCNYSNLCYINYNEWELHLDCCINCYKEYEKK 1761 Query: 157 --CVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIA 214 C++C++ ++ +W+ CDVC W H C + + + + + + C Sbjct: 1762 NFCIMCNEKYDEDDSKKWVQCDVCKFWIHLSCD--KNESRNIETLSNKN----IDYKCPT 1815 Query: 215 CN 216 C+ Sbjct: 1816 CS 1817 >gi|50841767|ref|YP_054994.1| putative Clp-family ATP-binding protease [Propionibacterium acnes KPA171202] Length = 844 Score = 107 bits (268), Expect = 6e-22 Identities = 35/261 (13%), Positives = 70/261 (26%), Gaps = 46/261 (17%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + + +I +D + + ++ + + + I Sbjct: 264 FEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGELQTIGATT 323 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ D PS+ ++ E + T + Sbjct: 324 LDEYRKYIEKDAALERRFQPIQVDEPSIP--LAIEILKGLRDRYEAHHKITITDEAITSA 381 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R + A D L D A + + R P + E + + + E + Sbjct: 382 ANLASRYIQDRFLPDKAID--LID--EAGARMNIRRMTAPPDLREFDERIARVRVEKEAA 437 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 D + LR E + L E +A+E Sbjct: 438 IDAQD------------------------FERAAGLRDDE-----KKLLAEREAKEEEWK 468 Query: 455 DFDPM--KMRMESEIRGLLKG 473 D + EI +L G Sbjct: 469 QGDESVPAVVGPDEIAEVLSG 489 >gi|65101|emb|CAA48642.1| c-ski [Xenopus laevis] Length = 717 Score = 107 bits (268), Expect = 7e-22 Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 28/179 (15%) Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE--- 303 D L + + L + L S L F+ M ++ + + +L+ Sbjct: 515 EVASHNDQHCSGLEAELEHLKQALDSGLDSKEAKEKFLHEVVKMRVKQEEKLNAALQAKR 574 Query: 304 --NGEGGFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--- 357 E FL +A ++ E E ++ +++E + E + K+A RELE Sbjct: 575 SLQQELEFLRVAKKEKLREATEAKRNLRKEIERLRAEHEKKMKEANESRLRLKRELEQAR 634 Query: 358 -----DKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 DK C +++ K QIEEL+S +L+ AE D QL+ D EAR E Sbjct: 635 QIRVCDKGCEAGRIRV---KYSAQIEELQS--KLQHAENDREQLRTDLVHEREAREHLE 688 >gi|32307598|gb|AAP79204.1| ClpB protease [Bigelowiella natans] Length = 256 Score = 107 bits (268), Expect = 7e-22 Identities = 25/187 (13%), Positives = 59/187 (31%), Gaps = 16/187 (8%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + I G G ++ + + + I Sbjct: 53 EFEERLKAVINEVKEDGTIILFIDEIHTIVGAGKAGDSGMDAGNLLKPMLARGELRCIGA 112 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ + P+ E ++ E+ V+ + + Sbjct: 113 TTVDEYRQYMEKDAALERRFQQVMVEEPTPEETI--SILRGLCEKYELFHKVRISDDSLI 170 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R A D L D A + ++ + K ++EE+E + + E Sbjct: 171 EAVRLSDRYIADRFLPDKAID--LVD--EAASKVQSQATSKPIELEEVERTLLRYEMELL 226 Query: 393 MFQLKAD 399 + A+ Sbjct: 227 SLKRPAN 233 >gi|73956613|ref|XP_546730.2| PREDICTED: similar to Ski oncogene (C-ski) [Canis familiaris] Length = 790 Score = 107 bits (267), Expect = 7e-22 Identities = 47/226 (20%), Positives = 83/226 (36%), Gaps = 48/226 (21%) Query: 257 DARGKKLFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE-----NGEG 307 D L + + L + L+ L F+ M ++ + S +L+ + E Sbjct: 594 DTTSGGLEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLSAALQAKRSLHQEL 653 Query: 308 GFL-IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------D 358 FL +A ++ E E ++ +++E + E + ++A RELE D Sbjct: 654 EFLRVAKKEKLREATEAKRNLRKEIERLRAENEKKMREANESRLRLKRELEQARQVRVCD 713 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 K C L+ K QIE+L+ V+L+ AEAD QL+AD R Sbjct: 714 KGCEAGRLR---AKYSAQIEDLQ--VKLQHAEADREQLRADLLR---------------- 752 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRME 464 + E+ + L E+L + + +E Sbjct: 753 ---------EREAREHLEKVVKELQEQLWPRPRPEAAGSESTAELE 789 >AAA_Q6ALY6_203-397_PF00004.17 Length = 195 Score = 106 bits (266), Expect = 9e-22 Identities = 19/148 (12%), Positives = 36/148 (24%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + +I +D + I + + + Sbjct: 54 EFEDRLKAVLKEVEKQAGNIILFIDELHTIVGAGASEGSMDASNMLKPALARGELHCVGA 113 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ PS+E+ ++ EI V+ Sbjct: 114 TTLNEYKKYIEKDTALERRFQPVLVQEPSVEDTVA--ILRGIKEKYEIHHGVRIQDAATV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 R DR L DKA Sbjct: 172 AAVTLSNRYI---------ADRFLPDKA 190 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 106 bits (266), Expect = 1e-21 Identities = 17/141 (12%), Positives = 37/141 (26%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + D I +D + + + + + + Sbjct: 54 EFEERLKAVLKELAQDEGRTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGA 113 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D P +E ++ E+ V+ T + Sbjct: 114 TTLDEYRKYVEKDAALERRFQKVLVDEPGVEATIA--ILRGLQEKYELHHGVEITDPAIV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 AE R A D Sbjct: 172 AAAELSHRYITDRFLPDKAID 192 >AAA_CLPB2_203-397_PF00004.17 Length = 195 Score = 106 bits (266), Expect = 1e-21 Identities = 20/148 (13%), Positives = 41/148 (27%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + D +I +D + + ++ + + I Sbjct: 54 EFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGALRCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQE D P++ + ++ E+ V+ + Sbjct: 114 TTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTI--SILRGLKERYEVHHGVKIADSALV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 172 AAAMLSNRYI---------SDRFLPDKA 190 >gi|67920889|ref|ZP_00514408.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Crocosphaera watsonii WH 8501] Length = 823 Score = 106 bits (266), Expect = 1e-21 Identities = 24/193 (12%), Positives = 57/193 (29%), Gaps = 22/193 (11%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 256 EFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 315 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS++ ++ E ++ ++ Sbjct: 316 TLDEYRKHIERDAALERRFQPVMVGEPSVDETV--EILFGLRERYEQHHKLKILDEALDA 373 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A + +++ + P +EL+ +R Sbjct: 374 AAKLSDRYISDRYLPDKAID--LID--EAGSRVRLINSQLPPAAKELDKELRTIL----- 424 Query: 394 FQLKADEARREAE 406 + D+A R + Sbjct: 425 --KQKDDAVRSQD 435 >AAA_Q5NYD0_201-395_PF00004.17 Length = 195 Score = 106 bits (266), Expect = 1e-21 Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + + + + + + I Sbjct: 54 EFEERLKAVLKEIAQEEGRIIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ E+ V T + Sbjct: 114 TTLDEYRKYIEKDAALERRFQKVLVDEPSVESTIA--ILRGLQEKYELHHGVDITDPAIV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 AE R A D Sbjct: 172 AAAELSHRYITDRFLPDKAID 192 >gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase subunit [Geobacillus kaustophilus HTA426] Length = 810 Score = 106 bits (266), Expect = 1e-21 Identities = 28/193 (14%), Positives = 58/193 (30%), Gaps = 20/193 (10%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + +I +D + + + + + + I Sbjct: 256 EFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGELQCIGAT 315 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D P++E E ++ E V + + Sbjct: 316 TLDEYRKYIEKDAALERRFQPIYVDEPTVE--ESIQILKGLRDRYEAHHRVSISDEAIVQ 373 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 + R A D L D+AC+ L+ P+++ELE ++ E Sbjct: 374 AVKLSDRYITDRFLPDKAID--LIDEACSKVRLRSFTA--PPKLKELE-----QKLEEVR 424 Query: 394 FQLKADEARREAE 406 + A +E E Sbjct: 425 KEKDAAVQSQEFE 437 >AAA_Q5FQY4_202-396_PF00004.17 Length = 195 Score = 106 bits (266), Expect = 1e-21 Identities = 22/156 (14%), Positives = 38/156 (24%), Gaps = 40/156 (25%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------------- 276 A + L V K +E + L+ +S Sbjct: 47 AGAKYRGEFEERLKAVLKEIETAEGEIIL-FIDEMHTLVGAGRSDGAMDASNLIKPELAR 105 Query: 277 ------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + ++ + FQ PS+ + ++ E+ V Sbjct: 106 GTLHCVGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTI--SILRGIKEKYELHHGV 163 Query: 325 QDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA 360 + T + A R DR L DKA Sbjct: 164 RITDNAIVAAATLSNRYI---------TDRFLPDKA 190 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 106 bits (266), Expect = 1e-21 Identities = 16/132 (12%), Positives = 34/132 (25%), Gaps = 20/132 (15%) Query: 238 FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFI 288 +I +D + + + + + + I ++ + Sbjct: 70 EGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCIGATTLDEYRKHVEKDAAL 129 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 FQ P++E+ ++ E V+ + R Sbjct: 130 ARRFQPVFVSEPTVEDTV--SILRGLKDKYEQHHGVRIADSALVAAVTLSNRYI------ 181 Query: 349 LDACDRELEDKA 360 DR L DKA Sbjct: 182 ---TDRFLPDKA 190 >AAA_CLPB2_204-398_PF00004.17 Length = 195 Score = 106 bits (266), Expect = 1e-21 Identities = 22/148 (14%), Positives = 41/148 (27%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + I Sbjct: 54 EFEERLKALVKEVQASDGEVILFIDELHLLVGAGSAEGSMDAANILKPALARGELRCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D PS+E+ ++ EI V+ + Sbjct: 114 TTLDEYRKHIEKDAALERRFQTVIVDQPSVEDTV--SILRGLKEKYEIHHGVRIKDAALV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 AE R DR L DKA Sbjct: 172 AAAELSNRYI---------ADRFLPDKA 190 >gi|32043647|ref|ZP_00140909.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pseudomonas aeruginosa UCBPP-PA14] Length = 932 Score = 106 bits (265), Expect = 1e-21 Identities = 33/276 (11%), Positives = 72/276 (26%), Gaps = 66/276 (23%) Query: 230 QHCAPNWDFEALIKELDFVRKIFRGSEDARGK--------------------KLFWKADE 269 A + L V + ++ + Sbjct: 327 AMVAGAKYRGEFEERLKQVMDELQAAQSEIILFIDEVHTIVGAGQGGGEGGLDVANVLKP 386 Query: 270 LIEKLK---------SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 + + + ++ ++ + FQ P++E ++ E Sbjct: 387 AMARGEMNLIGATTLNEYQKYIEKDAALERRFQPVFVPEPTVEQTI--SILRGLRDKLEG 444 Query: 321 AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEEL 380 V AE R A D L D A +++ + +I+EL Sbjct: 445 HHKVTIRDEAFVAAAELSDRYIGNRFLPDKAID--LID--QAAARVRIASTSRPAEIQEL 500 Query: 381 ESIVRLKQAEAD--MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER 438 E+ + + E D + DEA+ + K R+ E +E Sbjct: 501 EAELAQLKREQDYAASRKWYDEAKV-----------------------FEK-RIQERKEH 536 Query: 439 RQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 + + E + Q + +I ++ + Sbjct: 537 LEQITERWQ-----QTQGSKTEEVRVEDIAEIISKL 567 >AAA_CLPB_193-386_PF00004.17 Length = 194 Score = 106 bits (265), Expect = 1e-21 Identities = 21/134 (15%), Positives = 40/134 (29%), Gaps = 19/134 (14%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP--------LDACN 286 +I +D + I + + + + LI ++ Sbjct: 67 VKSAGEIILFVDEIHTIVGAGKTEGSPDAGNMLKPALARGELHLIGATTLDEYREIEKDA 126 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR 346 + FQ D PS+E+ ++ ++ V+ T + A R Sbjct: 127 ALERRFQPVFVDEPSVEDTI--SILRGIKERYQVHHNVEITDPALVAAATLSNRYI---- 180 Query: 347 SVLDACDRELEDKA 360 DR+L DKA Sbjct: 181 -----TDRQLPDKA 189 >gi|6648214|gb|AAF21212.1| unknown protein [Arabidopsis thaliana] Length = 764 Score = 106 bits (265), Expect = 1e-21 Identities = 27/144 (18%), Positives = 43/144 (29%), Gaps = 19/144 (13%) Query: 125 RCRNIACQNLLPADDCDCD-----ICSNKKG--FCNLCMCVICSKFDFASNTCRWIGCDV 177 RC +C + +P + C + G F C +C K S + + CD+ Sbjct: 249 RCH--SCDSTVPGNGLSVRWFLSYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDI 306 Query: 178 CSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWD 237 C W H C M G + C C VKD+ W Sbjct: 307 CQRWVHCHCDGISDDKYMQFQVDGKL-----QYKCATCRGE---CYQVKDLQDAVQELWK 358 Query: 238 FEALIKELDFVRKIFRGSEDARGK 261 + ++ + R + D Sbjct: 359 KKDVVD--KELIASLRAAADDEEN 380 >gi|21322226|ref|NP_035515.1| Sloan-Kettering viral oncogene homolog [Mus musculus] Length = 725 Score = 106 bits (265), Expect = 2e-21 Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 28/167 (16%) Query: 263 LFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE-----NGEGGFL-IA 312 L + + L + L+ L F+ M ++ + + +L+ + E FL +A Sbjct: 535 LEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLTAALQAKRTLHQELEFLRVA 594 Query: 313 PQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACAVT 364 ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 595 KKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRVRLKRELEQARQVRVCDKGCEAG 654 Query: 365 DLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L+ K Q+E+L++ +L+ AEAD QL+AD EAR E Sbjct: 655 RLR---AKYSAQVEDLQA--KLQHAEADREQLRADLLREREAREHLE 696 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 106 bits (264), Expect = 2e-21 Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 20/135 (14%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + +I +D + + + + + + + ++ Sbjct: 67 AKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 126 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ D P++E+ ++ E+ V+ T + A R Sbjct: 127 AALERRFQKVLVDEPTVEDTVA--ILRGLKERYELHHHVEITDPAIVAAASLSHRYI--- 181 Query: 346 RSVLDACDRELEDKA 360 DR+L DKA Sbjct: 182 ------SDRQLPDKA 190 >gi|33339558|gb|AAQ14302.1| ABRH1 [Marsilea quadrifolia] Length = 148 Score = 106 bits (264), Expect = 2e-21 Identities = 64/143 (44%), Positives = 86/143 (60%) Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 NE+ E ++ + V K+ K+R+VL D LEDK +L+ ER +K+ +I Sbjct: 5 NEVTEGQENLPKAAAAVGGSKLMEMDKSRAVLQNFDCNLEDKRPVAAELQFERARKRAEI 64 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE 437 E++ES+VR+KQAEA MFQ++ADEAR+EA +T KY KLRLSEAEE Sbjct: 65 EDIESVVRIKQAEAKMFQIRADEARKEAGGLQRIIVAKREKIEEDFTCKYKKLRLSEAEE 124 Query: 438 RRQYLFEELKAQENSQCDFDPMK 460 RRQ EEL+A EN+Q DF K Sbjct: 125 RRQKRLEELQALENAQNDFHKKK 147 >AAA_Q96TW3_202-394_PF00004.17 Length = 193 Score = 106 bits (264), Expect = 2e-21 Identities = 20/142 (14%), Positives = 42/142 (29%), Gaps = 12/142 (8%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V + + E +I +D + + + ++ + + + I Sbjct: 53 EFEERLKAVLKEVKESE--EGIILFIDEIHTVLGAGKGEGSMDAANLLKPMLARGELRCI 110 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ FQ+ D PS+ ++ E V+ T + Sbjct: 111 GATTLTEYKVIEKDPAFERRFQKVDVGEPSVAATI--SILRGLKERYESYHGVKITDSAL 168 Query: 332 EVVAEEKMRMFKKARSVLDACD 353 V A+ R A D Sbjct: 169 VVAAQLSDRYITTRFLPDKAID 190 >AAA_CLPB_206-400_PF00004.17 Length = 195 Score = 106 bits (264), Expect = 2e-21 Identities = 19/148 (12%), Positives = 42/148 (28%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + I + ++ + + I Sbjct: 54 EFEERLKAVLKEVEKSEGRIIMFIDELHTIVGAGKTDGAMDASNLLKPMLARGELHCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D P++E+ ++ E+ V+ + + Sbjct: 114 TTLDEYRKYIEKDPALERRFQPVLVDEPTIED--AISILRGLKERFEVHHGVRISDSAIV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 R DR+L DKA Sbjct: 172 EAVTLSHRYI---------TDRQLPDKA 190 >AAA_Q75GT3_284-478_PF00004.17 Length = 195 Score = 106 bits (264), Expect = 2e-21 Identities = 17/141 (12%), Positives = 39/141 (27%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + D + I +D + + ++ + + + I Sbjct: 54 EFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D PS+E+ ++ E+ V+ + + Sbjct: 114 TTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTI--SILRGLRERYELHHGVRISDSALV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 172 AAALLSDRYISGRFLPDKAID 192 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 106 bits (264), Expect = 2e-21 Identities = 16/124 (12%), Positives = 34/124 (27%), Gaps = 11/124 (8%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + I ++ + + +LI ++ + Sbjct: 71 GQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDPALE 130 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ+ PS+E+ ++ E V + A R + Sbjct: 131 RRFQQVFVGEPSVEDTIA--ILRGLKQRYEAHHKVTIGDDALVAAATLSNRYISGRQLPD 188 Query: 350 DACD 353 A D Sbjct: 189 KAID 192 >AAA_Q5QTU7_201-395_PF00004.17 Length = 195 Score = 105 bits (263), Expect = 2e-21 Identities = 13/128 (10%), Positives = 38/128 (29%), Gaps = 11/128 (8%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + + +I +D + + + + + + + ++ Sbjct: 67 SKEEGRIILFIDEMHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 126 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ + P++E+ ++ E+ V+ T + A R Sbjct: 127 AALERRFQKVLVEEPNVEDTIA--ILRGLKERYELHHSVEITDPAIVAAASLSHRYISDR 184 Query: 346 RSVLDACD 353 + A D Sbjct: 185 KLPDKAID 192 >AAA_CLPB_205-399_PF00004.17 Length = 195 Score = 105 bits (263), Expect = 2e-21 Identities = 17/141 (12%), Positives = 38/141 (26%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + I + ++ + + I Sbjct: 54 EFEERLKAVLKEVENSQGKIILFIDEIHNIVGAGKTEGSMDAGNLIKPMLARGELNCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D P++E+ +I EI ++ + Sbjct: 114 TTFDEYRKYIEKDKALERRFQPVIIDEPTVEDTI--SIIRGLKERFEIHHGIRIHDSAIV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A+ R A D Sbjct: 172 AAAKLSQRYITDRYLPDKAID 192 >AAA_Q9LF37_277-471_PF00004.17 Length = 195 Score = 105 bits (263), Expect = 2e-21 Identities = 16/141 (11%), Positives = 39/141 (27%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + D +I +D + + ++ + + + I Sbjct: 54 EFEDRLKAVLKEVTDSEGQIILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ D P++E+ ++ E+ V+ + + Sbjct: 114 TTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTI--SILRGLRERYELHHGVRISDSALV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 172 EAAILSDRYISGRFLPDKAID 192 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 105 bits (263), Expect = 2e-21 Identities = 20/150 (13%), Positives = 41/150 (27%), Gaps = 22/150 (14%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V +I +D + + + + + + Sbjct: 54 EFEERLKAVLSEVQTA--AGQIILFIDEMHTLVGAGKTDGAMDASNLLKPALARGELHCV 111 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ + FQ D P++E+ ++ E V+ + Sbjct: 112 GATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTI--SILRGLKEKYEQHHKVRVSDSA 169 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKA 360 + A R DR L DKA Sbjct: 170 LVAAAMLSNRYI---------TDRFLPDKA 190 >gi|4506967|ref|NP_003027.1| v-ski sarcoma viral oncogene homolog [Homo sapiens] Length = 728 Score = 105 bits (263), Expect = 2e-21 Identities = 47/220 (21%), Positives = 82/220 (37%), Gaps = 48/220 (21%) Query: 263 LFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE-----NGEGGFL-IA 312 L + + L + L+ L F+ M ++ + S +L+ + E FL +A Sbjct: 538 LEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLSAALQAKRSLHQELEFLRVA 597 Query: 313 PQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACAVT 364 ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 598 KKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRLRLKRELEQARQARVCDKGCEAG 657 Query: 365 DLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYT 424 L+ K QIE+L+ V+L+ AEAD QL+AD R Sbjct: 658 RLR---AKYSAQIEDLQ--VKLQHAEADREQLRADLLR---------------------- 690 Query: 425 SKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRME 464 + E+ + L E+L + + +E Sbjct: 691 ---EREAREHLEKVVKELQEQLWPRARPEAAGSEGAAELE 727 >gi|68381002|ref|XP_695268.1| PREDICTED: similar to Myeloid/lymphoid or mixed-lineage leukemia protein 4 (Trithorax homolog 2) [Danio rerio] Length = 812 Score = 105 bits (263), Expect = 2e-21 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 22/114 (19%) Query: 123 YKRCRNIACQNLLPADDCDCDICSNK-------KGFCNLC--------MCVICSK-FDFA 166 KR + C + C + KG C C C +C K ++ Sbjct: 262 NKRKKPWVCMTCIRCRSCGVTPGKSWDTEWNHDKGLCPDCTRLFDQGNYCTMCFKCYEDN 321 Query: 167 SNTCRWIGCDVCSHWCHTDC-AIREGLIKMGHSAKGASGMTEMLFHCIACNHTS 219 + + C C+HW H C + + L ++ S +++ C C Sbjct: 322 DYDSQMMQCSTCNHWVHAKCEGLTDDLYEILSSL-----PESVVYSCQPCLKEQ 370 >gi|23097548|ref|NP_691014.1| ATP-dependent Clp protease [Oceanobacillus iheyensis HTE831] Length = 809 Score = 105 bits (263), Expect = 2e-21 Identities = 41/259 (15%), Positives = 75/259 (28%), Gaps = 42/259 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + +I +D + + + + + + I Sbjct: 259 EFEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGAT 318 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D P+LE ++ E V T +E Sbjct: 319 TLDEYRKYIEKDAALERRFQPIQVDEPTLEETI--QILNGLRDRYEAHHRVTITDEAIEA 376 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R A D L D A + +++ P ++ELE + D Sbjct: 377 AASLSDRYITDRFLPDKAID--LID--EAGSKVRLRSYTVPPNLKELEQKL-------DE 425 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + + D A + E K LR SE R + E K Q + Sbjct: 426 VRKEKDAAVQSQEF-----------------EKAASLRDSEQRFREE--LETTKNQWKEK 466 Query: 454 CDFDPMKMRMESEIRGLLK 472 ++ ME +I ++ Sbjct: 467 QGQTDSEVTME-DIAAVVS 484 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 105 bits (263), Expect = 2e-21 Identities = 20/148 (13%), Positives = 42/148 (28%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + +I +D + + + + + + Sbjct: 54 EFEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGA 113 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ+ D PS E+ ++ E+ V T + Sbjct: 114 TTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIA--ILRGLKERYEVHHGVSITDGAII 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A+ R DR+L DKA Sbjct: 172 AAAKLSHRYI---------TDRQLPDKA 190 >gi|42565848|ref|NP_190778.2| PHD finger family protein [Arabidopsis thaliana] Length = 696 Score = 105 bits (263), Expect = 3e-21 Identities = 28/204 (13%), Positives = 55/204 (26%), Gaps = 22/204 (10%) Query: 127 RNIACQNLLPADDCDCD-----ICSNKKG--FCNLCMCVICSKFDFASNTCRWIGCDVCS 179 + +C++ +P + C + G F C +C K S + CD C Sbjct: 262 KCYSCESTVPGNGQSLRWFLGHTCCDACGRLFVKGNYCPVCLKVYRDSEATPMVCCDFCQ 321 Query: 180 HWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFE 239 W H C M G + C C S VKD+ W + Sbjct: 322 RWVHCQCDGISDEKYMQFQVDGNL-----QYKCSTCRGES---YQVKDLEDAVQEIWKRK 373 Query: 240 AL-----IKELDFVRKIFRGSEDARGKKLFWKADELI--EKLKSKLIDPLDACNFILMFF 292 + I L ++ + A + + + + + + I Sbjct: 374 DMADKDLIASLKASARVVGQTGGAPLMNQPGSVERKVSEKAMVNGEEEKPLRVLRIKSSR 433 Query: 293 QECDSDSPSLENGEGGFLIAPQDA 316 + ++ + + Sbjct: 434 PQDSDSEKFGKHATELSTVKAKKL 457 >gi|46329445|gb|AAH68305.1| Ski protein [Mus musculus] Length = 675 Score = 105 bits (262), Expect = 3e-21 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 28/167 (16%) Query: 263 LFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE-----NGEGGFL-IA 312 L + + L + L+ L F+ M ++ + + +L+ + E FL +A Sbjct: 485 LEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLTAALQAKRSLHQELEFLRVA 544 Query: 313 PQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACAVT 364 ++ E E + +++E + E + K+A RELE DK C Sbjct: 545 KKEKLREATEAKRSLRKEIERLRAENEKKMKEANESRVRLKRELEQARQVRVCDKGCEAG 604 Query: 365 DLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-----EARREAE 406 L+ K QIE+L++ +L+ AEAD QL+AD EAR E Sbjct: 605 RLR---AKYSAQIEDLQA--KLQHAEADREQLRADLLREREAREHLE 646 >AAA_Q68XR2_202-396_PF00004.17 Length = 195 Score = 104 bits (261), Expect = 4e-21 Identities = 16/141 (11%), Positives = 38/141 (26%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F K + + +I +D + + + ++ + + I Sbjct: 54 EFEKRLKSVLSEIKESSGEIILFIDELHLLVGTGKVEGAMDASNLLKPMLARGELHCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ PS+E+ ++ E+ V+ + + Sbjct: 114 TTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTI--SILRGIKEKYELHHAVRISDSAIV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 172 AAATLSNRYITDRYLPDKAID 192 >AAA_O77222_210-405_PF00004.17 Length = 196 Score = 104 bits (261), Expect = 4e-21 Identities = 14/141 (9%), Positives = 38/141 (26%), Gaps = 13/141 (9%) Query: 224 FVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKLKSKLIDP 281 F + + D ++ +D + + ++ + + + I Sbjct: 55 FEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARGELRCIGA 114 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ + PS++ ++ E+ V+ + Sbjct: 115 TTVSEYRQFIEKDKALERRFQQILVEQPSVDETI--SILRGLKERYEVHHGVRILDSALV 172 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 173 QAAVLSDRYISYRFLPDKAID 193 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 104 bits (261), Expect = 4e-21 Identities = 13/141 (9%), Positives = 37/141 (26%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + + +I +D + + + + + Sbjct: 54 EFEERLKAVISEVQKSEGRVILFIDELHTLVGAGASEGSMDASNLLKPALARGELRAIGA 113 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ+ P++E+ ++ E+ V+ + Sbjct: 114 TTLNEYRKYIEKDAALERRFQQVYCPEPTVEDTIA--ILRGLQEKYEVHHGVRIRDEALI 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 172 AAAVLSNRYITNRFLPDKAID 192 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 104 bits (261), Expect = 4e-21 Identities = 18/143 (12%), Positives = 40/143 (27%), Gaps = 13/143 (9%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS--- 276 E +K V + A +I +D + + + + + + Sbjct: 54 EFEERLKAVLKDIAKEE--GRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCV 111 Query: 277 ------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ + FQ+ + PS E+ ++ E+ V+ T Sbjct: 112 GATTLDEYRKYIEKDAALERRFQKVLVEEPSTEDAIA--ILRGLKERYEVHHGVEITDPA 169 Query: 331 MEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 170 IIAAATLSQRYITDRNLPDKAID 192 >gi|52001792|gb|AAU21734.1| class III stress response-related ATPase [Bacillus licheniformis ATCC 14580] Length = 810 Score = 104 bits (260), Expect = 5e-21 Identities = 40/248 (16%), Positives = 75/248 (30%), Gaps = 34/248 (13%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + +I +D + + + + + + I Sbjct: 256 EFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGAT 315 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D PS E E ++ E V T +E Sbjct: 316 TLDEYRKYIEKDAALERRFQPIQVDQPSPE--ESIQILKGLRDRYEAHHRVSITDEAIEA 373 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 + R A D L D A + +++ P ++ELE + D Sbjct: 374 AVKLSDRYISDRFLPDKAID--LID--EAGSKVRLRSFTTPPNLKELEQKL-------DE 422 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + + D A + E + + RL E E + ++E + QENS+ Sbjct: 423 VRKEKDAAVQSQEFEKAASL------------RDTEQRLREQVEETKKTWKEKQGQENSE 470 Query: 454 CDFDPMKM 461 D + M Sbjct: 471 VTVDDIAM 478 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 104 bits (260), Expect = 6e-21 Identities = 19/148 (12%), Positives = 41/148 (27%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + ++ +D + I + ++ + + I Sbjct: 54 EFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAMDAGNMLKPMLARGELHCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ P++E+ ++ EI V + Sbjct: 114 TTLDEYRQYIEKDAALERRFQKVLVPEPTVEDTV--SILRGLKERFEIHHGVNIHDNALV 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 172 AAASLSNRYI---------TDRFLPDKA 190 >AAA_Q25646_211-406_PF00004.17 Length = 196 Score = 104 bits (260), Expect = 6e-21 Identities = 15/141 (10%), Positives = 38/141 (26%), Gaps = 13/141 (9%) Query: 224 FVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKLKSKLIDP 281 F + + D ++ +D + + L+ + + + I Sbjct: 55 FEERLKSILKEIQDQKGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPLLARGELRCIGA 114 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ +PS++ ++ E+ V+ + Sbjct: 115 TTVSEYRQFIEKDKALERRFQQILVVNPSVDETI--SILRGLKERYEVHHGVRILDSALV 172 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 173 QAAILSDRYISYRFLPDKAID 193 >gi|56419503|ref|YP_146821.1| ATP-dependent Clp protease [Geobacillus kaustophilus HTA426] Length = 645 Score = 104 bits (260), Expect = 6e-21 Identities = 28/270 (10%), Positives = 81/270 (30%), Gaps = 49/270 (18%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + A + + +I +D + + + + + +++ Sbjct: 181 FEERMKRLIAELQERKNIILFIDEIHLLVGAGAAEGSMDAGNILKPALARGELQVVGATT 240 Query: 282 ------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ + FQ P++E E ++ E V+ T +E Sbjct: 241 LKEYRQIEKDAALERRFQPVIVHEPTVE--EAIAILKGIQPKYEQFHHVRYTDEAIEACV 298 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ 395 + R + A D L D+A + +L++ ++L+ + E + Sbjct: 299 KLSHRYIQDRFLPDKAID--LLDEAGSKANLRLG----PTDEKQLQERLIQIAKEKEQAA 352 Query: 396 LKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ-----------YLFE 444 + + +K L ++ Q E Sbjct: 353 KEEN---------------------YELAAKLRAEELKLEKQLEQGVTQERPTVDVADIE 391 Query: 445 ELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 ++ A++ ++ + +++ L + + Sbjct: 392 QIIAEKTGI-PVGKLQADEKEKMKHLEENL 420 >AAA_CLPB1_203-398_PF00004.17 Length = 196 Score = 104 bits (259), Expect = 6e-21 Identities = 22/149 (14%), Positives = 44/149 (29%), Gaps = 22/149 (14%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLID 280 F + ++ +D + + GS ++ + + + I Sbjct: 54 EFEDRLKAVLREVTESNGNIVLFIDELHTVVGTGSNQQGAMDAGNLLKPMLARGELRCIG 113 Query: 281 P---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + FQ+ D PS+EN ++ E+ V+ + + Sbjct: 114 ATTLDEFRKFIEKDAALERRFQQVYVDQPSVENTI--SILRGLKERYEVHHNVKISDSAL 171 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 172 VAAATLSARYI---------ADRFLPDKA 191 >gi|68560433|ref|ZP_00599746.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Rubrobacter xylanophilus DSM 9941] Length = 887 Score = 104 bits (259), Expect = 7e-21 Identities = 29/226 (12%), Positives = 66/226 (29%), Gaps = 33/226 (14%) Query: 224 FVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------ 276 F + + Q E +I +D + I + + + Sbjct: 334 FEERMKQLLNELQREEKNIILFIDELHTIVGAGGAEGAVTASNMLKPALARGELQVVGAT 393 Query: 277 ---KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + FQ + P+++ ++ E V+ + + Sbjct: 394 TLDEYRKHVEKDPALERRFQPVLVEEPTVDETIA--ILFGLRDRYEAHHRVRISDEAIIA 451 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D+A A L+ +L+ I + E Sbjct: 452 AAQLSERYITDRFLPDKAID--LLDEAAAEVRLRSTVPPV-----DLKRI----EEEIAS 500 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR 439 + + ++A R + Y + +L+L E++ Sbjct: 501 LENQKEDAVRAED----------YERAAQYKQRIEQLKLELREKQE 536 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 104 bits (259), Expect = 7e-21 Identities = 19/126 (15%), Positives = 36/126 (28%), Gaps = 20/126 (15%) Query: 244 ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFILMFFQE 294 +D + + + + + + I ++ + FQ+ Sbjct: 76 FIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQK 135 Query: 295 CDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDR 354 PS+E+ ++ EI + T + AE R DR Sbjct: 136 VLVGEPSVEDTIA--ILRGLQERYEIHHGIDITDPAIVAAAELSDRYI---------TDR 184 Query: 355 ELEDKA 360 L DKA Sbjct: 185 FLPDKA 190 >AAA_Q6RYQ7_204-398_PF00004.17 Length = 195 Score = 103 bits (258), Expect = 8e-21 Identities = 17/143 (11%), Positives = 38/143 (26%), Gaps = 13/143 (9%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + +I +D + + ++ + + Sbjct: 54 EFEERLKAVLKEVEEAE--GKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCI 111 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ FQ+ PS+ + ++ E V+ R Sbjct: 112 GATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTV--SILRGLKEKYEGHHGVRIQDRA 169 Query: 331 MEVVAEEKMRMFKKARSVLDACD 353 + V A+ R A D Sbjct: 170 LVVAAQLSARYIMGRHLPDKAID 192 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 103 bits (258), Expect = 9e-21 Identities = 14/141 (9%), Positives = 38/141 (26%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + + + ++ + + I Sbjct: 54 EFEERLKAVLSEIKESSGEIILFIDELHLLVGTGKTDGAMDASNLLKPMLARGELHCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P++E+ ++ E+ V+ + + Sbjct: 114 TTLDEYRKYIEKDAALARRFQPVYVSEPTVEDTI--SILRGIKEKYELHHAVRISDSAIV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 172 AAATLSNRYITDRYLPDKAID 192 >AAA_Q5PA28_202-396_PF00004.17 Length = 195 Score = 103 bits (258), Expect = 9e-21 Identities = 17/140 (12%), Positives = 39/140 (27%), Gaps = 23/140 (16%) Query: 230 QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLID 280 + A N +I +D + + ++ + + + + Sbjct: 65 KIVASN---GKIILFIDELHMLVGAGATGGSMDASNILKPVLARGEIRCIGATTLDEYRE 121 Query: 281 PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMR 340 ++ + FQ P+ + ++ E+ ++ T + A R Sbjct: 122 HIEKDPALARRFQPVFVAEPTTGDTI--SILRGLKEKYELHHGIRITDSAIVAAATLSNR 179 Query: 341 MFKKARSVLDACDRELEDKA 360 DR L DKA Sbjct: 180 YI---------TDRFLPDKA 190 >AAA_Q9LLI0_289-483_PF00004.17 Length = 195 Score = 103 bits (258), Expect = 9e-21 Identities = 13/124 (10%), Positives = 37/124 (29%), Gaps = 11/124 (8%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFIL 289 +I +D + + + ++ + + ++ ++ + Sbjct: 71 GQIILFIDEIHTVVGAGATSGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPALE 130 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ+ PS+E+ ++ E+ V+ + + A R + Sbjct: 131 RRFQQVFCSQPSVEDTI--SILRGLRERYELHHGVKISDSALVSAAVLADRYITERFLPD 188 Query: 350 DACD 353 A D Sbjct: 189 KAID 192 >gi|71675746|ref|ZP_00673490.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Trichodesmium erythraeum IMS101] Length = 825 Score = 103 bits (257), Expect = 1e-20 Identities = 29/202 (14%), Positives = 61/202 (30%), Gaps = 23/202 (11%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + + + + + + I Sbjct: 256 EFEERLKKIMDEIRANGNIILVIDEIHTVVGAGAIEGSMDAANILKPALARGELQCIGAT 315 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS+E ++ + E + + + Sbjct: 316 TLDEYRKHIERDAALERRFQPVKVGEPSVEQTI--EILYGVRSAYEQHHRLTISDEALRA 373 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTD---------LKMERQKKKPQIEELESIV 384 A+ R A D L D+A + L+ R++ I++ E V Sbjct: 374 AAQLSDRYISDRFLPDKAID--LIDEAGSRVRVKNSMVSPQLRELRRELSRVIKDKEETV 431 Query: 385 RLKQAEADMFQLKADEARREAE 406 R + E QL+ E +AE Sbjct: 432 RQQDFEK-ASQLRDRELGIQAE 452 >gi|47459200|ref|YP_016062.1| ATP-dependent Clp protease, ATPase subunit [Mycoplasma mobile 163K] Length = 711 Score = 103 bits (257), Expect = 1e-20 Identities = 25/215 (11%), Positives = 71/215 (33%), Gaps = 10/215 (4%) Query: 266 KADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + + +++ + + Q+ P++E+ ++ E V+ Sbjct: 162 QMQLVGATTIEEYRKYIESDSALERRMQKVKVAEPNIEDTIT--ILRGIKGRFETFHNVK 219 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + + + A R A D L D A + +K E + ++E+++ + Sbjct: 220 ISDKALIAAANLSARYISDRFLPDKAID--LVD--EAASTIKTEINSQPEELEKIQQKII 275 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE-RRQYLFE 444 + E + + + K++ + E ++ E Sbjct: 276 TFETEKAALKSENTIQSNLRVEELNNELKKLNSEHKILSEKWISEKNVVIELNDKKRKIE 335 Query: 445 ELKAQ-ENSQCD--FDPMKMRMESEIRGLLKGMEM 476 LK + Q + ++ M S++ + K +++ Sbjct: 336 SLKHEVSKLQNEGLYEKASKIMYSDLPKIEKELKI 370 >gi|61815938|ref|XP_599963.1| PREDICTED: similar to CDC42-binding protein kinase beta, partial [Bos taurus] Length = 1388 Score = 103 bits (257), Expect = 1e-20 Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 26/242 (10%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWK----ADELIEKLK 275 ++ + + + + + ++E + GS G K +E IE+LK Sbjct: 897 QVEAYERRIRRLEQERLELSRKLQESTQTVQSLHGSARTLGGAARDKEIKRLNEEIERLK 956 Query: 276 SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI-AEVVQDTARKMEVV 334 +K+ D Q D+ + E+ + + + + + +D +++ Sbjct: 957 NKIADSSRLER------QLEDTVTLRQEHEDSAQRLKGLEKQYRVVRQEKEDLHKQLIEA 1010 Query: 335 AE---EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV---RLKQ 388 +E + R K A +E + + +L+ ++QK Q+ + E V K Sbjct: 1011 SERLKSQARELKDAHQQRKLALQEFSELNERMAELRSQKQKVSRQLRDREEEVEAAMQKI 1070 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 +AD+ R+E E SK KLR +E + + EL+A Sbjct: 1071 DALRQEVRRADKGRKELEVQLEDAVAE--------ASKERKLR-EHSENFSKQVESELEA 1121 Query: 449 QE 450 + Sbjct: 1122 LK 1123 Score = 49.8 bits (118), Expect = 2e-04 Identities = 23/197 (11%), Positives = 56/197 (28%), Gaps = 16/197 (8%) Query: 294 ECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTA-RKMEVVAEEKMRMFKKARSVLDAC 352 + ++ + E + E + VQ + + + K+ ++ Sbjct: 897 QVEAYERRIRRLEQER-LELSRKLQESTQTVQSLHGSARTLGGAARDKEIKRLNEEIERL 955 Query: 353 D------RELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA- 405 LE + L+ E + +++ LE R+ + E + + EA Sbjct: 956 KNKIADSSRLERQLEDTVTLRQEHEDSAQRLKGLEKQYRVVRQEKEDLHKQLIEASERLK 1015 Query: 406 -----EXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQENSQCDFDP 458 + +LR + + + + EE++A Sbjct: 1016 SQARELKDAHQQRKLALQEFSELNERMAELRSQKQKVSRQLRDREEEVEAAMQKIDALRQ 1075 Query: 459 MKMRMESEIRGLLKGME 475 R + + L +E Sbjct: 1076 EVRRADKGRKELEVQLE 1092 >gi|53763100|ref|ZP_00163644.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Synechococcus elongatus PCC 7942] Length = 839 Score = 102 bits (256), Expect = 1e-20 Identities = 34/258 (13%), Positives = 74/258 (28%), Gaps = 39/258 (15%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 270 EFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 329 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS+++ ++ E ++ +E Sbjct: 330 TLDEYRKHIERDAALERRFQPVMVGEPSVDDTI--EILRGLRERYEQHHKLKIADEALEA 387 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A+ R A D L D A + +++ + P +EL+ +R Sbjct: 388 AAKLADRYISDRFLPDKAID--LID--EAGSRVRLMNSQLPPAAKELDKELRQ------- 436 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 D+A R + K +LR E E + Q + + Sbjct: 437 VLKDKDDAVRSQDFD-----------------KAGELRDREMEIKTQIRSIAQSKKADGT 479 Query: 454 CDFDPMKMRMESEIRGLL 471 D + E +I ++ Sbjct: 480 SSTDDSPIVTEEDIAHIV 497 >AAA_CLPB2_206-400_PF00004.17 Length = 195 Score = 102 bits (256), Expect = 2e-20 Identities = 21/150 (14%), Positives = 43/150 (28%), Gaps = 22/150 (14%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K V ++ +D + + ++ + + +I Sbjct: 54 EFEERLKAVLSEVKAAE--GRILLFVDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMI 111 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 112 GATTLDEYRKHIEKDAALERRFQQVLVDEPSVEDTI--SILRGLRERLEVFHGVKIQDTA 169 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKA 360 + A R DR L DKA Sbjct: 170 LVSAATLSHRYI---------TDRFLPDKA 190 >gi|33641129|emb|CAE22259.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB [Prochlorococcus marinus str. MIT 9313] Length = 928 Score = 102 bits (256), Expect = 2e-20 Identities = 39/274 (14%), Positives = 77/274 (28%), Gaps = 33/274 (12%) Query: 224 FVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + D + ++ +D + + S D + + + I Sbjct: 314 FEERLRSVLKEVSDPDAGVVLFIDELHTVV--SSDRSSADAGSLLKPALARGDLRCIGAT 371 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ+ PSLE ++ E+ V T + Sbjct: 372 TPENYRRTVEKDQALNRRFQQVLIKEPSLE--LSVEILRGLKERYELHHGVTITDGAVTA 429 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 R A D L D A LKM+ K +EE E+ +R + Sbjct: 430 ANRLADRYISDRCLPDKAID--LID--EAAAQLKMDVTSKPQVVEEAEAELRRVELALLA 485 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFEELKAQEN 451 + + R + + ++ R AE R Q + A Sbjct: 486 AEQAPEVERVQLQ----AARIAAASQLTELQERWQIERDHLAELRDLLQQDEDLRNAIAE 541 Query: 452 SQCDFDPMKM---------RMESEIRGLLKGMEM 476 ++ D R++ L + + + Sbjct: 542 AERLGDLEAAARLQYDQLHRVQQRRADLEETLAV 575 >gi|62734338|gb|AAX96447.1| ATPase, AAA family, putative [Oryza sativa (japonica cultivar-group)] Length = 918 Score = 102 bits (256), Expect = 2e-20 Identities = 24/186 (12%), Positives = 53/186 (28%), Gaps = 20/186 (10%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK--------- 275 + + +I LD V + + + + Sbjct: 361 EERLKNILEEIKQNGEIILFLDEVHTLVTAGSAEGAIDAANIFKPALARGELQCIGATTI 420 Query: 276 SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ ++ + FQ +++ G ++ + VQ T + A Sbjct: 421 NEYRKHIEKDAALERRFQPVKIPESTVDETVG--ILKGLRERYQGHHKVQYTDEALVAAA 478 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ 395 E + + A D L D+A ++ L+ Q K V +AE Sbjct: 479 ELSHKHIRDRFLPDKAID--LMDEAGSIVRLR-NAQCKPS------KKVNDLEAELKKTL 529 Query: 396 LKADEA 401 + ++A Sbjct: 530 KEKNDA 535 >gi|28212201|ref|NP_783145.1| negative regulator of genetic competence mecB/clpC [Clostridium tetani E88] Length = 811 Score = 102 bits (256), Expect = 2e-20 Identities = 36/260 (13%), Positives = 76/260 (29%), Gaps = 42/260 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + +I +D + I + + + + I Sbjct: 259 EFEDRLKKVMEEIRKSGNVILFIDEIHTIIGAGAAEGAIDASNILKPALARGEIQCIGAT 318 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + + FQ P+ E E ++ E T +E Sbjct: 319 TIDEYRKHIEKDSALERRFQPITVGEPTKE--EAILILRGLRDKYEAHHRANITDEAIEA 376 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 R + A D L D A + +++E ++ELE + + Sbjct: 377 AVNLSDRYITERYLPDKAID--LMD--EAASKVRIENMIAPTDMKELEENL-------EK 425 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + ++A R + K +LR E+ +Y E LK+ +Q Sbjct: 426 VTKEKEDAIRVQDF-----------------EKAAQLRDH--EKDLKYRLENLKSDWKTQ 466 Query: 454 CDFDPMKMRMESEIRGLLKG 473 + E++I ++ Sbjct: 467 KQVATL-TVDETQIAAVVSK 485 >gi|67155734|ref|ZP_00417361.1| AAA ATPase, central region:Clp, N terminal:Protein of unknown function DUF104 [Azotobacter vinelandii AvOP] Length = 756 Score = 102 bits (256), Expect = 2e-20 Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 15/172 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLKSKLIDPL 282 F K I +D + I + G L+ + + I Sbjct: 267 FEKRFKALLNELRKKPHAILFIDEIHTIIGAGAASGGVMDASNLLKPLLSSGEIRCIGST 326 Query: 283 D---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + FQ+ D PS+E+ G ++ E ++ + + Sbjct: 327 TFQEFRGIFEKDRALARRFQKVDVIEPSVEDTVG--ILRGLKPRFEQHHGIEYSDEALRA 384 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIV 384 AE R A D + D+A A L+ E R+ K + ++E IV Sbjct: 385 AAELSFRYINDRHMPDKAID--VIDEAGAFQRLQPEDRRAKLIDVAQVEDIV 434 >AAA_Q9XEI1_205-399_PF00004.17 Length = 195 Score = 102 bits (255), Expect = 2e-20 Identities = 17/143 (11%), Positives = 38/143 (26%), Gaps = 13/143 (9%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + +I +D + + ++ + + Sbjct: 54 EFEERLKAVLKEVEEAE--GKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCI 111 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ FQ+ PS+ + ++ E V+ R Sbjct: 112 GATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTI--SILRGLKEKYEGHHGVRIQDRA 169 Query: 331 MEVVAEEKMRMFKKARSVLDACD 353 + V A+ R A D Sbjct: 170 IVVAAQLSARYIMGRHLPDKAID 192 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 102 bits (255), Expect = 2e-20 Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 20/135 (14%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDAC 285 + +I +D + + + + + + ++ ++ Sbjct: 67 SKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKD 126 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ+ + PS E+ ++ E+ V T + A+ R Sbjct: 127 AALERRFQKVLVEEPSEEDTIA--ILRGLKERYEVHHKVAITDGAIIAAAKLSHRYI--- 181 Query: 346 RSVLDACDRELEDKA 360 DR+L DKA Sbjct: 182 ------TDRQLPDKA 190 >gi|15026259|gb|AAK81126.1| ATPases with chaperone activity clpC, two ATP-binding domain [Clostridium acetobutylicum ATCC 824] Length = 813 Score = 102 bits (255), Expect = 2e-20 Identities = 34/235 (14%), Positives = 69/235 (29%), Gaps = 41/235 (17%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D + I + + + + I Sbjct: 260 EFEERLKKVMTEIKAAKNVILFIDEIHTIVGAGGAEGAIDASNILKPSLARGEIQCIGAT 319 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D PS E E ++ E V+ T +E Sbjct: 320 TTEEYRRYIEKDAALERRFQPVDVGEPSKE--EAVQILEGLRDKYEAHHGVKITDDAIEA 377 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 R + A D L D A ++++ P ++ ++ E + Sbjct: 378 AVNLSTRYIQDRFLPDKAID--LID--EAAAKVRIQNLTAPPDLKN-------QEEELEK 426 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 + +A R + K KLR + E++ + EE K Sbjct: 427 TTREKSDAIRLQDF-----------------EKAAKLR--DKEKKLRIAIEEFKK 462 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 102 bits (255), Expect = 2e-20 Identities = 18/145 (12%), Positives = 40/145 (27%), Gaps = 22/145 (15%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP--- 281 +K + + +I +D + + ++ + + + I Sbjct: 59 LKALLDEVKSS--DGEVILFIDEIHTLVGAGATEGALDASNMLKPMLARGELRCIGATTL 116 Query: 282 ------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ + FQ PS+E ++ E+ ++ + A Sbjct: 117 KEYQKYIEKDAALERRFQPVYVKEPSVEETVT--ILRGLKGRYELHHGIRILDSALIAAA 174 Query: 336 EEKMRMFKKARSVLDACDRELEDKA 360 R DR L DKA Sbjct: 175 TLSNRYI---------SDRFLPDKA 190 Score = 42.5 bits (99), Expect = 0.022 Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 9/79 (11%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFE---ALIKELDFVRKIFRGSEDARGKKLFWKADEL 270 C + L + K + + A F+ ++ I RG + ++ Sbjct: 109 RCIGATTLKEYQKYIEKDAALERRFQPVYVKEPSVEETVTILRGLKG------RYELHHG 162 Query: 271 IEKLKSKLIDPLDACNFIL 289 I L S LI N + Sbjct: 163 IRILDSALIAAATLSNRYI 181 >gi|46135092|ref|ZP_00162367.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Anabaena variabilis ATCC 29413] Length = 831 Score = 102 bits (254), Expect = 2e-20 Identities = 26/199 (13%), Positives = 55/199 (27%), Gaps = 20/199 (10%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------- 276 F + + + +I +D + + G + + + Sbjct: 274 FEERIKKIVEEVRSAGNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGELQCIGATT 333 Query: 277 --KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 + ++ + FQ PS+ ++ E V + + Sbjct: 334 LDEYRQHIERDAALERRFQPIMVGEPSVAETI--DILYGLRGAYEQHHKVHISDEAVVAA 391 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLK-MERQKKKPQIEELESIVRLKQAEAD- 392 A+ R A D L D+A + L+ + K +L I + K Sbjct: 392 AQLADRYISDRFLPDKAID--LIDEAGSRVRLRNSQISPNKELKRQLTDITKSKNEAVRV 449 Query: 393 -----MFQLKADEARREAE 406 +L+ +E E E Sbjct: 450 QDFDKAAKLRDEEIALETE 468 >gi|10172715|dbj|BAB03822.1| class III stress response-related ATPase [Bacillus halodurans C-125] Length = 813 Score = 102 bits (254), Expect = 2e-20 Identities = 42/269 (15%), Positives = 78/269 (28%), Gaps = 49/269 (18%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + +I +D + + + + + + I Sbjct: 258 EFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGAT 317 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ + PSL+ E ++ E V T +E Sbjct: 318 TLDEYRKYIEKDAALERRFQPIQVNEPSLD--ESIQILKGLRDRYEAHHRVTITDEAIEE 375 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 + R + A D L D A + +++ P ++ELE K E Sbjct: 376 AVKLSDRYIQDRFLPDKAID--LID--EAASKVRLRSYTAPPNLKELE----QKLEETR- 426 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQEN-- 451 + D A + E K LR SE Q + EEL +N Sbjct: 427 --KEKDAAVQSQEF-----------------EKAASLRDSE-----QRIREELDQMKNDW 462 Query: 452 SQCDFDPMKMRMESEIRGL---LKGMEMT 477 Q + +I + G+ ++ Sbjct: 463 KQKQGQENTQVVVDDIAQVVASWTGIPVS 491 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 102 bits (254), Expect = 3e-20 Identities = 13/141 (9%), Positives = 36/141 (25%), Gaps = 12/141 (8%) Query: 223 GFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + A +I +D + + + + + Sbjct: 54 EFEERLKAVIEAVQKSDGGVILFIDELHTLVGAGASEGSMDASNLLKPALARGELRSIGA 113 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ+ P++E+ ++ E+ V+ + Sbjct: 114 TTLNEYRKYIEKDAALERRFQQVYCVQPTVEDTIA--ILRGLQEKYEVHHGVRIKDEALV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 R A D Sbjct: 172 AATVLSDRYITNRFLPDKAID 192 >gi|6754392|ref|NP_034717.1| intersectin 1 (SH3 domain protein 1A) [Mus musculus] Length = 1714 Score = 102 bits (254), Expect = 3e-20 Identities = 50/249 (20%), Positives = 88/249 (35%), Gaps = 48/249 (19%) Query: 226 KDVFQHCAPNWDFEALIKELDFVRKIFRGS--EDARGKKLFWKADELIEK---LKSKLID 280 +++ + W+ + L+ K G+ AR K L ++ + L +K L+ KL D Sbjct: 438 RELERQRQLEWERNRRQELLNQRNKEQEGTVVLKARRKTLEFELEALNDKKHQLEGKLQD 497 Query: 281 PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN------EIAEVVQDTARKMEVV 334 C QE +S + S E Q + Q + +++ V Sbjct: 498 --IRCRLATQR-QEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILSDQLKQV 554 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 + + R L R LE K ++ RQ+ + Q++E+E R K E D+F Sbjct: 555 QQNSL-----HRDSLLTLKRALEAK-------ELARQQLREQLDEVERETRSKLQEIDVF 602 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-----EERRQYLFEELKAQ 449 + E R + K R EA +E+ + E K + Sbjct: 603 NNQLKELRE-----------------IHSKQQLQKQRSLEAARLKQKEQERKSLELEKQK 645 Query: 450 ENSQCDFDP 458 E++Q Sbjct: 646 EDAQRRVQE 654 Score = 48.3 bits (114), Expect = 4e-04 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 25/153 (16%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 K+ + ++L+ +L + L QE D + EI Sbjct: 568 KRALEAKELARQQLREQLDEVERETRSKL---QEIDVFNN------------QLKELREI 612 Query: 321 AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL------EDK--ACAVTDLKMERQK 372 Q ++ A K + ++ L+ + DK V + R + Sbjct: 613 HSKQQLQKQRSLEAARLKQKEQERKSLELEKQKEDAQRRVQERDKQWLEHVQQEEQPRPR 672 Query: 373 KKPQIEELESI--VRLKQAEADMFQLKADEARR 403 K + + L+ VR K+AE D+ R Sbjct: 673 KPHEEDRLKREDSVRKKEAEERAKPEMQDKQSR 705 Score = 41.4 bits (96), Expect = 0.055 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 7/119 (5%) Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 E R + A + + + L+ Q++K + + + R + E + Sbjct: 354 RENFERGSVELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQEAKRQLELEKQLE 413 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-LSEAEERRQYLFEELKAQENS 452 + +RE E + + R L RRQ L + ++ Sbjct: 414 K------QRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEG 466 Score = 37.9 bits (87), Expect = 0.55 Identities = 28/253 (11%), Positives = 75/253 (29%), Gaps = 28/253 (11%) Query: 252 FRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLI 311 F + ++ + ++ + L + + + QE + + + Sbjct: 349 FEDKKRENFERGSVELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQEAKRQLEL 408 Query: 312 APQDACNEIAEVVQDTARKME------VVAE-EKMRMFKKARSVLDACDRELEDKACAVT 364 Q E ++ R+ E E E+ R + R+ + + Sbjct: 409 EKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEGTV 468 Query: 365 DLKMERQKKKPQIEELESIVRLKQAEA---------DMFQLKADEARREAEXXXXXXXXX 415 LK R+ + ++E L + + ++++ RE Sbjct: 469 VLKARRKTLEFELEALNDKKHQLEGKLQDIRCRLATQRQEIESTNKSRELRIAEITHLQQ 528 Query: 416 XXXXXXXYTSKYLKLRLSEAEERRQ------------YLFEELKAQENSQCDFDPMKMRM 463 + + + +++ +Q L L+A+E ++ + Sbjct: 529 QLQESQQMLGRLIPEKQILSDQLKQVQQNSLHRDSLLTLKRALEAKELARQQLREQLDEV 588 Query: 464 ESEIRGLLKGMEM 476 E E R L+ +++ Sbjct: 589 ERETRSKLQEIDV 601 >gi|37521111|ref|NP_924488.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC 7421] Length = 778 Score = 102 bits (254), Expect = 3e-20 Identities = 20/168 (11%), Positives = 49/168 (29%), Gaps = 15/168 (8%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + + G + + + + I Sbjct: 264 EFEERLKGVMQEVIASKGQIVLFIDELHTLVGAGASEGGMDAANLLKPALARGELQCIGA 323 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ PS++ E ++ E ++ T +E Sbjct: 324 TTLDEYRKHIERDAALERRFQPVTVGEPSVD--EAIAILQGLKVRYEEHHKLRYTDAALE 381 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER-QKKKPQIEE 379 R A D L D+A ++ +K+ R + ++ Sbjct: 382 AAVRLSDRYIADRFLPDKAID--LIDEAGSMIRVKLARGAELPAIVDS 427 >gi|26553830|ref|NP_757764.1| ATP-dependent protease binding subunit [Mycoplasma penetrans HF-2] Length = 705 Score = 101 bits (253), Expect = 3e-20 Identities = 31/270 (11%), Positives = 73/270 (27%), Gaps = 24/270 (8%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSED--ARGKKLFWKADELIEKLK---- 275 F K + +I +D + ++ + G ++ + + Sbjct: 107 EFEKRLNALIKEAKQNNGAVILFIDEIHQLMGMGKAGNNSGMDAANILKPIMARGEIKII 166 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ ++ + FQ+ + P+ E E ++ EI V+ Sbjct: 167 GATTSNEYRQYIEKDGALERRFQKILVEEPTPE--EALTIMRGLKEKWEIYHKVRIQDNA 224 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + + R A D L D A +K E E + + + E Sbjct: 225 LVASVKLSERYISDKYLPDKAID--LID--EAAAKIKTEAHTSPS--EPINKKIFYLETE 278 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA-- 448 + ++E ++ + + + + E Sbjct: 279 KIALSKEEGTNQKERINEIEIELEKLKQERDLVEKEWKEQKEQQVALNKIKKEIEKNNWD 338 Query: 449 QENSQC--DFDPMKMRMESEIRGLLKGMEM 476 E Q ++ + S + L K +E Sbjct: 339 VERYQNQGEYTEASKILYSVLPELKKKLEA 368 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 101 bits (253), Expect = 3e-20 Identities = 17/148 (11%), Positives = 40/148 (27%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + +I +D + + + + + Sbjct: 54 EFEERLKAVIREVAKSEGKVILFIDELHTLVGAGAAEGAMDASNMLKPALARGELHCIGA 113 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ ++ + FQ+ + PS+E+ ++ E ++ + Sbjct: 114 TTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIA--ILRGLKEKYENYHGIRIKDSAII 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 172 AAATLSDRYI---------TDRFLPDKA 190 >AAA_Q7NIW8_202-395_PF00004.17 Length = 194 Score = 101 bits (253), Expect = 4e-20 Identities = 13/140 (9%), Positives = 36/140 (25%), Gaps = 11/140 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + ++ +D V + + + + + I Sbjct: 54 EFEERLKKIMDEIRAAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 113 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P+++ ++ E ++ T + Sbjct: 114 TLDEYRKHIERDAALERRFQPVMVGEPTVDETI--EILRGLRERYEQHHKLKITDEALIA 171 Query: 334 VAEEKMRMFKKARSVLDACD 353 A+ R A D Sbjct: 172 AAQLSDRYISDRYLPDKAID 191 >AAA_Q5GTA2_203-397_PF00004.17 Length = 195 Score = 101 bits (253), Expect = 4e-20 Identities = 16/148 (10%), Positives = 39/148 (26%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + +I +D + + + + + + Sbjct: 54 EFEERLKAVINELAKAEGKIILFIDELHTLVGAGATSGAMDASNLLKPALARGEIRCIGA 113 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + ++ + FQ P+ + ++ E+ ++ T + Sbjct: 114 TTLDEYREHIEKDPALARRFQPVFISQPTETDTV--SILRGLKERYEVHHGIRITDGAII 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 172 AAAMLSNRYI---------TDRFLPDKA 190 >AAA_Q873Z4_139-332_PF00004.17 Length = 194 Score = 101 bits (252), Expect = 4e-20 Identities = 19/149 (12%), Positives = 43/149 (28%), Gaps = 21/149 (14%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 + +K V + +I +D + + + + + + +L Sbjct: 54 DFEERLKSVLKEVEEAKK--GVILFVDELHTLLGLGKAEGSIDASNLLKPALSRGELQLC 111 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + FQ P++++ ++ E+ V+ T + Sbjct: 112 GATTLSEYRQIEKDAALARRFQPIQVGEPTVQDTI--SILRGIKERYEVHHGVRITDNAL 169 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 170 VAAASYSNRYI---------TDRFLPDKA 189 >AAA_CLPB_201-381_PF00004.17 Length = 181 Score = 101 bits (252), Expect = 4e-20 Identities = 12/117 (10%), Positives = 36/117 (30%), Gaps = 11/117 (9%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------KLIDPLDAC 285 + + ++I +D + + + + + + + ++ Sbjct: 67 SQEEGSVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKD 126 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMF 342 + FQ+ D P++E+ ++ E+ V+ T + A R Sbjct: 127 AALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHHVEITDPAIVAAARLSHRYV 181 >gi|24213091|ref|NP_710572.1| ATPase (clpc) [Leptospira interrogans serovar Lai str. 56601] Length = 846 Score = 101 bits (252), Expect = 4e-20 Identities = 22/193 (11%), Positives = 58/193 (30%), Gaps = 20/193 (10%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + + +I +D + + + + + Sbjct: 266 EFEERLKKIMKEITSSTNIIIFIDELHTLIGAGAAEGAVDAANILKPALARGELQCIGAT 325 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ ++ + + FQ PS+++ ++ E V+ + + +E Sbjct: 326 TSAEYRKYIEKDSALERRFQVVKVAEPSVDD--AIQILQGLKKAYETHHKVRYSDKALEQ 383 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 + R A D + D+A A L + I++LE ++ Sbjct: 384 SVKLSHRYINDRYLPDKAID--IIDEAGAKARLANC--ARPQTIKDLEEEIKSL-----A 434 Query: 394 FQLKADEARREAE 406 + + +E E Sbjct: 435 SKKEELVRAQEYE 447 >gi|62513420|ref|ZP_00384970.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Lactobacillus casei ATCC 334] Length = 835 Score = 101 bits (252), Expect = 5e-20 Identities = 29/195 (14%), Positives = 56/195 (28%), Gaps = 15/195 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + + + + + +LI Sbjct: 267 EFEDRLKKIIDEIYKDGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQLIGAT 326 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + F D P+ E E ++ E V T + Sbjct: 327 TLDEYQKYIEKDAALERRFATIQVDEPTEE--EAEQILKGLRPRYEAHHGVTITDEALHQ 384 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDL-KMERQKKKPQI-EELESIVRLKQAEA 391 R A D L D++ A L K + K ++ +EL +V K+ Sbjct: 385 AVVLSSRYITTRFLPDKAID--LVDESAAKVRLDKANVETKADKLQDELAKLVADKEDAI 442 Query: 392 DMFQLKADEARREAE 406 D + R E Sbjct: 443 DHQDFETAANIRTQE 457 >gi|46203683|ref|ZP_00051159.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Magnetospirillum magnetotacticum MS-1] Length = 669 Score = 101 bits (252), Expect = 5e-20 Identities = 38/244 (15%), Positives = 72/244 (29%), Gaps = 44/244 (18%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKL-----------FWKADEL 270 F + V + + ++LI +D + I + L + + + Sbjct: 337 EFEERVQKILKEITEEKDSLILFIDEMHTIVGAGQGGGEGGLDIANTFKPALARGELNLI 396 Query: 271 IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ ++ + FQ D P++ ++ E V T Sbjct: 397 GATTLNEYQKYIEKDAALERRFQPVYVDEPTVAQTIM--ILRGLRDTLESHHKVTITDEA 454 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + AE R A D L D A +K+ + ++ELE+ V + E Sbjct: 455 IIAAAELSDRYITGRFMPDKAID--LID--QAAARVKISATARPVDVQELEAEVAQIKRE 510 Query: 391 AD--MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 D + + D A LK L + ++ L E K Sbjct: 511 QDYAAARKQFDRAAE------------------------LKKELEQKQKELDELLEIWKR 546 Query: 449 QENS 452 + S Sbjct: 547 DQAS 550 >gi|15606774|ref|NP_214154.1| ATPase subunit of ATP-dependent protease [Aquifex aeolicus VF5] Length = 1006 Score = 101 bits (252), Expect = 5e-20 Identities = 33/262 (12%), Positives = 78/262 (29%), Gaps = 41/262 (15%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + + + + + ++I Sbjct: 388 EFEERLKALLDEVKEKGNVILFIDEIHTVVGAGAAEGAVDAANIMKPALARGEIRVIGAT 447 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D P+ E ++ E V+ + +E Sbjct: 448 TVDEYRKYIEKDPALERRFQPVFVDEPTEEQTI--EILKGLRPRLEQFHKVKISDEAIEA 505 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 + R R A D A K++ P+I+E+E ++ + + Sbjct: 506 AVKLTKRYVTFRRLPDKAID----ALDQAAARKKLKVIGTPPEIQEIERKIKALEEQIIE 561 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEELKAQEN 451 LK D K +L++ +A E+ +Q L ++ E Sbjct: 562 ANLKGD------------------------YEKEAQLKIEKAKLEKEKQELLGKVGGVEA 597 Query: 452 SQCDFDPMKMRMESEIRGLLKG 473 + ++ +I+ + Sbjct: 598 KIAELKKKIEELDEKIKEAAEK 619 >gi|67638450|ref|ZP_00437386.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Burkholderia mallei 10399] Length = 1048 Score = 101 bits (252), Expect = 5e-20 Identities = 27/185 (14%), Positives = 57/185 (30%), Gaps = 16/185 (8%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + + A ++ +D + A + + + Sbjct: 276 EFEQRLKRVIAEIRASQTPVVLFIDEAHTLIGAGGAAGASDAANLLKPALARGELRTIAA 335 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 S+ + + FQ DSP + ++ + A V + Sbjct: 336 TTWSEYKKYFEKDAALARRFQPVKLDSPDV--ATSVMILRGLKERYQDAHGVTIRDDALV 393 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R + A D L D ACA +K+ +Q K +E+ + ++ + E Sbjct: 394 AAAELSARYITGRQLPDKAID--LLDTACA--RVKVRQQTKPAALEDAQRAIQALERERR 449 Query: 393 MFQLK 397 + + Sbjct: 450 ALRDE 454 >AAA_Q9SPH4_204-398_PF00004.17 Length = 195 Score = 101 bits (251), Expect = 5e-20 Identities = 16/143 (11%), Positives = 38/143 (26%), Gaps = 13/143 (9%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---- 275 E +K V + +I +D + + ++ + + Sbjct: 54 EFEERLKAVLKEVEEAE--GKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQLRCI 111 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + ++ FQ+ PS+ + ++ E V+ R Sbjct: 112 GATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTV--SILRGLKEKYEGHHGVRIQDRA 169 Query: 331 MEVVAEEKMRMFKKARSVLDACD 353 + + A+ R A D Sbjct: 170 LVIAAQLSSRYIMGRHLPDKAID 192 >gi|3309543|gb|AAC41377.1| MLL [Takifugu rubripes] Length = 4498 Score = 101 bits (251), Expect = 6e-20 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 22/121 (18%) Query: 125 RCRNIACQNLLPADDCD---------CDICSNKKGFCNLCMCVICSK-FDFASNTCRWIG 174 RC+ C P D C C+ F +CV+C+K ++ + + Sbjct: 1769 RCK--CCGATKPGKSWDAQWSHDFSMCHDCAKL--FAKRNICVLCNKCYEDDEADGKMVE 1824 Query: 175 CDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIAC--NHTSELFGFVKDVFQH 231 C C H H C + + + ++ + + C C H +E ++ Q Sbjct: 1825 CGRCHHRVHAKCEKLTDDMYELLSKL-----PESVAYTCTKCTERHPAEWRTALERQLQG 1879 Query: 232 C 232 C Sbjct: 1880 C 1880 >AAA_Q7SDI0_128-321_PF00004.17 Length = 194 Score = 101 bits (251), Expect = 6e-20 Identities = 19/149 (12%), Positives = 41/149 (27%), Gaps = 21/149 (14%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 + +K V +I +D + + + + + + + Sbjct: 54 DFEERLKKVLGEVQEA--NGEVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGELQCC 111 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + FQ P++E+ ++ E+ V+ T + Sbjct: 112 GATTMTEYRQIEKDVALARRFQPIIVSEPTVEDTI--SILRGIKEKYEVHHGVRITDGAL 169 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 170 VAAATYSNRYI---------TDRFLPDKA 189 >gi|68172787|ref|ZP_00546068.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Frankia sp. CcI3] Length = 834 Score = 101 bits (251), Expect = 6e-20 Identities = 26/196 (13%), Positives = 57/196 (29%), Gaps = 19/196 (9%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------- 276 F + + + +I +D + + ++ + + Sbjct: 262 FEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 321 Query: 277 --KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 + L+ + FQ PS+ + ++ E V T + Sbjct: 322 LDEYRKHLEKDAALERRFQPIQVAEPSVAHTI--EILKGLRDRYEAHHRVSITDAALVAA 379 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV----RLKQAE 390 A R A D L D A + +++ R P + E + + R K++ Sbjct: 380 ASLADRYISDRFLPDKAID--LID--EAGSRMRIRRMTAPPDLREFDERIAAVRRDKESA 435 Query: 391 ADMFQLKADEARREAE 406 D + + R+ E Sbjct: 436 IDAQDFEKAASLRDKE 451 >AAA_Q6AC89_75-269_PF00004.17 Length = 195 Score = 101 bits (251), Expect = 6e-20 Identities = 23/162 (14%), Positives = 42/162 (25%), Gaps = 40/162 (24%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKAD------------------ 268 D+ A + L V K +E R + Sbjct: 41 DLSALVAGAMYRGQFEERLKAVLKEIDAAEG-RIITFVDELHILMGAGGGEGSVAASNML 99 Query: 269 -ELIEKLKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN 318 ++ + + +LI ++ + FQ+ PS+E+ ++ Sbjct: 100 KPMLARGELRLIGATTLDEYREFIEKDAALERRFQQVYVGEPSVEDTVA--ILRGLKGRY 157 Query: 319 EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA 360 E V + A R R+L DKA Sbjct: 158 EAHHGVTIEDSALVAAASLSNRYI---------TARQLPDKA 190 >gi|23473480|ref|ZP_00128776.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Desulfovibrio desulfuricans G20] Length = 949 Score = 100 bits (250), Expect = 7e-20 Identities = 42/273 (15%), Positives = 79/273 (28%), Gaps = 56/273 (20%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARG-----------KKLFWKADEL 270 F + V + + LI +D V I + + + + Sbjct: 358 EFEERVQKVLKEVTEHQDELILFIDEVHAIVGAGQGGGEGGLDVANVFKPMMARGELNLI 417 Query: 271 IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ ++ + FQ P++ ++ E V T Sbjct: 418 GATTLNEYQKYIEKDAALERRFQPVMVPEPTVAQTMM--ILRGLRDTFEAHHKVSITEDA 475 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVR 385 + AE R R L DKA A +K+ + ++ELES + Sbjct: 476 IIAAAELSDRYI---------TARFLPDKAIDLLDQAAARVKLSATARPVAVQELESELH 526 Query: 386 LKQAEAD--MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLF 443 + E D + + D+A L R+ E + L Sbjct: 527 QLRREQDYVASRKQYDKAAE------------------------LGKRIEAKETELKKLV 562 Query: 444 EELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 EE + + S +K ++I L G+ + Sbjct: 563 EEWERERASGSA--EVKAEHVAQIVSRLTGIPV 593 >gi|18146107|dbj|BAB82147.1| ClpC adenosine triphosphatase [Clostridium perfringens str. 13] Length = 814 Score = 100 bits (250), Expect = 7e-20 Identities = 26/186 (13%), Positives = 57/186 (30%), Gaps = 15/186 (8%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + D + +I +D + I + + + + I Sbjct: 262 EFEERLKKVLNEVKDSDDIILFIDEMHNIVGAGGAEGAIDASNILKPALARGEIQCIGAT 321 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + + FQ PS E+ ++ E+ V+ T +E Sbjct: 322 TTDEYRKNIEKDSALERRFQPVVVKEPSKEDSVL--ILKGLREKYEVHHNVKLTDEAIEA 379 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 R A D L D A +++E P++ + E ++ + E + Sbjct: 380 AVNLSSRYITDRFLPDKAID--LID--EAAAKVRIESMIVPPRLFKQEELIANLKVEKEE 435 Query: 394 FQLKAD 399 D Sbjct: 436 AIKLQD 441 >AAA_Q5BE67_125-318_PF00004.17 Length = 194 Score = 100 bits (250), Expect = 7e-20 Identities = 19/149 (12%), Positives = 40/149 (26%), Gaps = 21/149 (14%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 + +K V + +I +D + + + + + + + Sbjct: 54 DFEERLKSVLKEVEEAQ--GGVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGELQCC 111 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + FQ PS+ ++ E+ V+ T + Sbjct: 112 GATTLNEYRLIEKDVALARRFQPIQVGEPSVAATI--SILRGIKDKYEVHHGVRITDGAL 169 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 170 VAAATYSNRYI---------TDRFLPDKA 189 >gi|47221226|emb|CAG13162.1| unnamed protein product [Tetraodon nigroviridis] Length = 3783 Score = 100 bits (250), Expect = 7e-20 Identities = 23/130 (17%), Positives = 41/130 (31%), Gaps = 25/130 (19%) Query: 123 YKRCRNIACQNLLPADDCDCDI--------CSNKKGFCNLC--------MCVICSK-FDF 165 K+ R C N + C S+ C+ C C IC+K ++ Sbjct: 1536 TKKKRVWVCNNCVRCKCCGATKPGKSWDAQWSHDFSMCHDCAKLFAKRNFCHICTKCYED 1595 Query: 166 ASNTCRWIGCDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIACNHT--SELF 222 + I C C H H C + + + ++ + + C C +E Sbjct: 1596 DEADAKMIECGRCHHRVHAKCEKLTDDMYELLSKL-----PESVAYTCTKCAERYPTEWR 1650 Query: 223 GFVKDVFQHC 232 ++ Q C Sbjct: 1651 MALETQLQGC 1660 >AAA_Q6G134_202-396_PF00004.17 Length = 195 Score = 100 bits (250), Expect = 8e-20 Identities = 18/148 (12%), Positives = 39/148 (26%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + A +I +D + + + + + + Sbjct: 54 EFEERLKAVLAEVQAENGQIILFIDELHNLVGAGKSDGPMDASNLLKPALARGELHCVGA 113 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ P+L++ ++ E V+ + Sbjct: 114 TTLDEYRKYVEKDAALARRFQPVFVPEPTLDDTI--SILRGIKEKYEQHHKVRLADSALI 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 172 AAARLSNRYI---------TDRFLPDKA 190 >gi|4981954|gb|AAD36462.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga maritima MSB8] Length = 791 Score = 100 bits (249), Expect = 9e-20 Identities = 32/240 (13%), Positives = 64/240 (26%), Gaps = 36/240 (15%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDAC 285 +I +D V + + + + ++ Sbjct: 269 KRKKGEVILFIDEVHTVVGAGAAEGALDAANIMKPELTTGEIQIIGATTVEEYRKYIEKD 328 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ + P++E ++ E V+ T +E A+ R Sbjct: 329 RALERRFQPVMVEEPTVEQTI--EILKGLRKVFEEHHHVKITDDALEAAAKLSARYITNR 386 Query: 346 RSVLDACDRELEDKACAVTDLKMERQKKKP--------QIEELESIV------------R 385 A D L D+A A L+ +I+ LE + Sbjct: 387 FLPDKAVD--LIDEAAAYVRLE---SSYPSEELLKLEEEIKNLEDKINDAVVKGEYEEAA 441 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 + E + + +E R++ E + R+ E+E + EE Sbjct: 442 KLKVELQKLKNEYEEKRKKQEKVEPVVDENVVAKIVEQWTGIPVSRIMESEREKLLKLEE 501 >gi|15458317|gb|AAK99529.1| ATP dependent protease [Streptococcus pneumoniae R6] Length = 752 Score = 100 bits (249), Expect = 9e-20 Identities = 27/175 (15%), Positives = 57/175 (32%), Gaps = 19/175 (10%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + E +I +D + +I GS + + + +L+ Sbjct: 207 FEERMQKLMEEIRKREDIILFIDEIHEIVGAGSASDGNMDAGNILKPALARGELQLVGAT 266 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + Q D P+++ ++ E VQ T +E Sbjct: 267 TLNEYRIIEKDAALERRMQPVKVDEPTVDETIT--ILKGIQKKYEDYHHVQYTDAAIEAA 324 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKME------RQKKKPQIEELESI 383 A R + A D L D+A + +L + ++ + E L+S Sbjct: 325 ATLSNRYIQDRFLPDKAID--LLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKSQ 377 >gi|6048267|emb|CAB58125.1| c-ski protein [Oreochromis aureus] Length = 687 Score = 100 bits (249), Expect = 9e-20 Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 26/200 (13%) Query: 215 CNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL 274 C S+ P+W + E+ +R++ D + + E++ ++ Sbjct: 460 CTSVSQTLTPQSMARAQERPSWLPGTVCPEMGTMRQMLYAGLDTKEAR-EKLLQEIV-RM 517 Query: 275 KSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 + K + L A Q+ +A + E E ++ +++E + Sbjct: 518 RVKQEEKLAAALQAKRSLQQELE----------FVRVAKKGRLREAIEAKRNLRKEIERL 567 Query: 335 AEEKMRMFKKARSVLDACDRELE--------DKACAVTDLKMERQKKKPQIEELESIVRL 386 + R ++A RELE DK C L++ K QIEEL V+L Sbjct: 568 RVDWERKMREAEESCGRLKRELERERQLRVCDKGCEAERLRV---KYSTQIEEL--HVQL 622 Query: 387 KQAEADMFQLKADEARREAE 406 +QAEAD QL+ E ++E E Sbjct: 623 QQAEADREQLRR-ELQQERE 641 >AAA_Q7U7P3_206-399_PF00004.17 Length = 194 Score = 100 bits (249), Expect = 9e-20 Identities = 15/140 (10%), Positives = 37/140 (26%), Gaps = 11/140 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 54 EFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 113 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ + PS+++ ++ E ++ T + Sbjct: 114 TLDEYRKHIERDAALERRFQPVNVGEPSIDDTI--EILRGLRERYEQHHRLKITDDALVA 171 Query: 334 VAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 172 AATLGDRYISDRFLPDKAID 191 >gi|76163351|gb|EAO57534.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chloroflexus aurantiacus J-10-fl] Length = 833 Score = 100 bits (249), Expect = 9e-20 Identities = 29/249 (11%), Positives = 69/249 (27%), Gaps = 44/249 (17%) Query: 234 PNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDA 284 I +D I + + + + I ++ Sbjct: 277 DEIKESRCILFIDEFHTIIGAGGAEGTLDAANILKPALSRGELQTIGATTLDEYRKYIER 336 Query: 285 CNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKK 344 + FQ D PS+E+ ++ + E +Q + + A R Sbjct: 337 DAALERRFQPVMVDEPSIEDTI--QILRGIKSRYEDFHQLQISDEAIRAAAVLSARYVPD 394 Query: 345 ARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 + A D L D A + ++M R P++ + + + + + + A + Sbjct: 395 RQLPDKAID--LID--EAASRVRMYRSATPPRLRDALRGL-------EALRKEREAALED 443 Query: 405 AEXXXXXXXXXXXXXXXXYTSKYLKL--RLSEAEERRQYLFEELKAQENSQCDFDPMKMR 462 + + ++ R+ E E +E + + Sbjct: 444 QQ----------FELANDLREREERMLSRIQEIEAELGTRSDE-----RYERPY-----V 483 Query: 463 MESEIRGLL 471 E +I ++ Sbjct: 484 TEEDIAEVV 492 >gi|32444984|emb|CAD74986.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula baltica SH 1] Length = 859 Score = 100 bits (249), Expect = 1e-19 Identities = 35/261 (13%), Positives = 74/261 (28%), Gaps = 44/261 (16%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + I +D + + + + + + I Sbjct: 276 FEERIKAVMTEVRRVKNTILFIDELHTLVGAGGAEGAIDAANVLKPALARGEIQCIGATT 335 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ N + FQE P+ + E ++ E VQ T + Sbjct: 336 LDEYRKYIEKDNALARRFQEIMV-EPTGK-TETIEILKGLRERYEEHHRVQFTDDAVVAA 393 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 E R A D + D+A A L+ + P ++E++ V + Sbjct: 394 VEMSERYITARCLPDKAID--VIDEAGARVRLRT--MTRPPDLKEIDEQV-------ETL 442 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL-FEELKAQENSQ 453 ++A K LR + R++ + +++ Q Sbjct: 443 NKDKEDA-----------------VANQDFEKAANLRDQAEKLRKKKEQITQEWREKSQQ 485 Query: 454 CDFDPMKMRMESEIRGLLKGM 474 D + E I ++ M Sbjct: 486 TDG----VVDEEIIAEVVSKM 502 >gi|34499124|ref|NP_903339.1| ATP-dependent Clp protease, ATP-binding subunit [Chromobacterium violaceum ATCC 12472] Length = 760 Score = 100 bits (249), Expect = 1e-19 Identities = 33/182 (18%), Positives = 52/182 (28%), Gaps = 36/182 (19%) Query: 233 APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK----------------- 275 A + L V K ++D + LI Sbjct: 260 AGTKYRGDFEQRLKAVIKQL--TDDTNAILFIDEIHTLIGAGAASGGTLDASNLLKPALS 317 Query: 276 ------------SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV 323 ++ + N + FQ+ D P++E ++ + E Sbjct: 318 NGSLRCIGATTYNEYRGIFEKDNALSRRFQKIDVTEPTVEQTV--EILKGLKSRFEAHHG 375 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD-LKMERQKKKPQIEELES 382 V+ T + AE R A D + D+A A L RQKK E+E Sbjct: 376 VKYTQSALSTAAELSARYINDRHLPDKAID--VIDEAGAAQKILPKSRQKKVINKSEIEE 433 Query: 383 IV 384 IV Sbjct: 434 IV 435 >gi|66359990|ref|XP_627173.1| multidomain chromatinic protein [Cryptosporidium parvum] Length = 2244 Score = 99 bits (248), Expect = 1e-19 Identities = 27/118 (22%), Positives = 36/118 (30%), Gaps = 28/118 (23%) Query: 128 NIACQNLLPADDC------------------DCDICSNKKGFCNLCMCVICSKFDFASNT 169 N C N C C C GF C IC K +S Sbjct: 567 NFNCSNCCKCIHCGYRDNGFMDYASWDSTFSSCIRCCK--GFERGQFCSICRKIWTSSWE 624 Query: 170 CRWIGCDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVK 226 W+ CD+C W H DC I+ + K L++C AC + + Sbjct: 625 GEWLQCDICKFWVHYDCDKDLNEPIEFYSNVKN-------LYNCPACRSNDNSVKYQR 675 >gi|68056364|ref|ZP_00540488.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Exiguobacterium sp. 255-15] Length = 815 Score = 99.5 bits (247), Expect = 1e-19 Identities = 30/247 (12%), Positives = 70/247 (28%), Gaps = 41/247 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + +I +D + + + + + + I Sbjct: 256 EFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGAT 315 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ P+ + E ++ E V T ++ Sbjct: 316 TLDEYRKYIEKDAALERRFQPIQVAEPTTD--EATQILFGLRDRYEAHHRVTITDEAIQE 373 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 R A D L D A + +++ P ++E+E A+ + Sbjct: 374 AVTLSDRYISDRFLPDKAID--LID--EAASKVRLRSYTAPPNLKEVE-------AKLEG 422 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + DEA + E L + E++ + E LK + ++ Sbjct: 423 IRKDKDEAVQSQEF-------------------EKAASLRDTEQKLRDELERLKEEWQNK 463 Query: 454 CDFDPMK 460 + ++ Sbjct: 464 QGNEKLE 470 >gi|62515994|ref|ZP_00387365.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 688 Score = 99.5 bits (247), Expect = 2e-19 Identities = 37/270 (13%), Positives = 91/270 (33%), Gaps = 44/270 (16%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + Q +I +D + +I G + + + +L+ Sbjct: 143 FEQRMQQLVKELQSQPDIILFIDEIHEIVGVGNSEGGMDAGNIIKPALARGELQLVGATT 202 Query: 282 ------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ + + FQ + PS++ ++ E V+ T +E Sbjct: 203 IKEFREIEKDSALARRFQPVEVKEPSIDETI--KILKGIQKRYEDYHHVKYTDNAIEAAV 260 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKME---RQKKKPQIEELESIVRLKQAEAD 392 + R + A D L D A + + + K+K Q E +++ +LKQ D Sbjct: 261 KLSARYIQDRFLPDKAID--LLD--EAGSRMNLTIPYIDKEKIQ-ERIDAAEKLKQ---D 312 Query: 393 MFQLK-ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-----QYLFEEL 446 + + ++A + KY KL+ + + + +++ Sbjct: 313 ALKNEDYEKAAYYRD----------------QIEKYEKLKDQNVDPDKAPTITAKVMDKI 356 Query: 447 KAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 ++ + D ++ + E ++ L ++ Sbjct: 357 VEEKTNIPVGD-IQAQEEKQLANLASDLKA 385 >gi|14495033|emb|CAC42150.1| putative chaperone [Streptomyces coelicolor A3(2)] Length = 837 Score = 99.5 bits (247), Expect = 2e-19 Identities = 28/195 (14%), Positives = 55/195 (28%), Gaps = 27/195 (13%) Query: 224 FVKDVFQHCAPNWD-FEALIKELDFVRKIF------RGSEDARGKK----LFWKADELIE 272 F + + + +I +D + + S DA + + Sbjct: 288 FEERLKKVIEDVQQARGDIILFIDELHTVVGAGASGESSMDAGNMLKPALARGELHVVGA 347 Query: 273 KLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ PS+E ++ E V+ + Sbjct: 348 TTIDEYRKYVEKDAALERRFQPVMVPEPSVEETV--QILEGLRDAYEAHHQVRFADGALT 405 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLK 387 AE R DR L DKA A +++ + ++ E + Sbjct: 406 AAAELSDRYV---------SDRFLPDKAIDVMDQAGARVRLRSASRSTEVVGREDRIAKL 456 Query: 388 QAEADMFQLKADEAR 402 + E + D AR Sbjct: 457 RREQEQAVAAEDYAR 471 >AAA_CLPB_197-391_PF00004.17 Length = 195 Score = 99.5 bits (247), Expect = 2e-19 Identities = 13/124 (10%), Positives = 35/124 (28%), Gaps = 11/124 (8%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFIL 289 +I +D + + + + + + + I ++ + Sbjct: 71 GQIILFIDELHTLVGAGKTEGAMDAGQLLKPALARGELRCIGATTLDEYRKYIEKDAALE 130 Query: 290 MFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL 349 FQ + PS+E+ ++ E+ ++ T + + R Sbjct: 131 RRFQTVMVEEPSVED--AITILRGLKEKYEVHHGIRITDAALVSAVKLSHRYITNRFLPD 188 Query: 350 DACD 353 A D Sbjct: 189 KAID 192 >gi|24379042|ref|NP_720997.1| ATP-dependent protease ClpE [Streptococcus mutans UA159] Length = 753 Score = 99.1 bits (246), Expect = 2e-19 Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 19/191 (9%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D + +I GS + + + +L+ Sbjct: 208 FEERMQKLMEEIRQRQDVILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLVGAT 267 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + Q D PS+ ++ E V+ T +E Sbjct: 268 TLNEYRIIEKDAALERRMQPVKVDEPSVAETIT--ILKGIQPKYEDYHHVKYTDEAIEAA 325 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R + A D L D+A + +L + +I+ RL +AE Sbjct: 326 ANLSNRYIQDRFLPDKAID--LLDEAGSKMNLTLNFVD-PKEIDH-----RLIEAENLKA 377 Query: 395 QLKADEARREA 405 Q DE +A Sbjct: 378 QATRDEDYEKA 388 >gi|62650161|ref|XP_233731.3| PREDICTED: similar to Ski protein [Rattus norvegicus] Length = 465 Score = 99.1 bits (246), Expect = 2e-19 Identities = 44/219 (20%), Positives = 80/219 (36%), Gaps = 48/219 (21%) Query: 263 LFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE-----NGEGGFL-IA 312 L + + L + L+ L F+ M ++ + + +L+ + E FL +A Sbjct: 275 LEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLTAALQAKRSLHQELEFLRVA 334 Query: 313 PQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACAVT 364 ++ E E + +++E + E + K+A RELE DK C Sbjct: 335 KKEKLREATEAKRSLRKEIERLRAENEKKMKEANESRVRLKRELEQARQVRVCDKGCEAG 394 Query: 365 DLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYT 424 L+ K QIE+L++ +L+ AEAD QL+AD R Sbjct: 395 RLR---AKYSAQIEDLQA--KLQHAEADREQLRADLLR---------------------- 427 Query: 425 SKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRM 463 + E+ + L E+L + + + Sbjct: 428 ---EREAREHLEKVVKELQEQLWPRPRPENSGGESNAEL 463 >AAA_O00828_200-394_PF00004.17 Length = 195 Score = 99.1 bits (246), Expect = 2e-19 Identities = 18/141 (12%), Positives = 40/141 (28%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + + + +I +D + + + L+ + + Sbjct: 54 EFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKPLLARGELRTIGA 113 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ F + PS+E E ++ E VQ T + + Sbjct: 114 TTLEEYRQYVEKDAAFERRFMPVQVNEPSVE--ECTSILRGLKDRYEQHHGVQITDKAVV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 V A+ R A D Sbjct: 172 VAAQLAGRYITNRFLPDKAID 192 >gi|22536667|ref|NP_687518.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus agalactiae 2603V/R] Length = 753 Score = 99.1 bits (246), Expect = 2e-19 Identities = 32/190 (16%), Positives = 63/190 (33%), Gaps = 23/190 (12%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D + +I G+ + + + +L+ Sbjct: 211 FEERMQKLMEEIRQRQDVILFIDEIHEIVGAGTAGEGSMDAGNILKPALARGELQLVGAT 270 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + Q D PS+E ++ E V+ +E Sbjct: 271 TLNEYRIIEKDAALERRMQPVKVDEPSVEETIT--ILKGIQKKYEDYHHVKYNNDAIEAA 328 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R + A D L D+A + +L + +I++ RL +AE Sbjct: 329 AVLSNRYIQDRFLPDKAID--LLDEAGSKMNLTLNFVD-PKEIDQ-----RLIEAE---- 376 Query: 395 QLKADEARRE 404 LKA R E Sbjct: 377 NLKAQATREE 386 >AAA_CLPB_202-397_PF00004.17 Length = 196 Score = 99.1 bits (246), Expect = 2e-19 Identities = 16/156 (10%), Positives = 35/156 (22%), Gaps = 32/156 (20%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---------- 276 D+ A + L V + S+ + ++ Sbjct: 41 DLGAMVAGAKYRGEFEERLKTVLAEIKDSDGQ-VVTFIDELHTVVGAGAGGDSAMDAGNM 99 Query: 277 -------------------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 + + ++ + FQ+ P++E+ ++ Sbjct: 100 LKPMLARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDSIA--ILRGLKGR 157 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACD 353 E VQ + A R A D Sbjct: 158 YEAHHKVQIADSALVAAASLSDRYITSRFLPDKAID 193 >AAA_CLPB_199-393_PF00004.17 Length = 195 Score = 99.1 bits (246), Expect = 2e-19 Identities = 14/141 (9%), Positives = 31/141 (21%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + + I Sbjct: 54 EFEERLKSVVNEVKKSEGDIILFIDEIHTLVGAGKGEGAMDAANILKPALARGELRSIGA 113 Query: 282 LD---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + FQ D P + ++ E V+ + Sbjct: 114 TTLDEYQKYFEKDKALERRFQIVQVDEPDTLSTI--SILRGLKERYENHHHVRIKDDAII 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 E R A D Sbjct: 172 AAVELSSRYITDRFLPDKAID 192 >gi|29840119|ref|NP_829225.1| ATP-dependent Clp protease, ATP-binding subunit [Chlamydophila caviae GPIC] Length = 846 Score = 99.1 bits (246), Expect = 2e-19 Identities = 29/233 (12%), Positives = 66/233 (28%), Gaps = 30/233 (12%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + ++ +D + I + + + + I Sbjct: 280 FEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASNILKPALARGEIQCIGATT 339 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ+ PS++ ++ E V T ++ Sbjct: 340 IDEYRKHIEKDAALERRFQKIIVQPPSVDETI--EILRGLKKKYEEHHNVAITEEALKAA 397 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A + A D L D A +++ + ++ +LE+ + E Sbjct: 398 ATLSDQYVHGRFLPDKAID--LLD--EAGARVRVNTMDQPTELMKLEA-----EIETTKL 448 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + +E E K L+ RLS ++ + EE + Sbjct: 449 AKEQAIGTQEYEKAAGLRD----------EEKKLRERLSNMKQEWENHKEEHQ 491 >gi|68195609|gb|EAN10049.1| UvrB/UvrC protein:AAA ATPase, central region [Enterococcus faecium DO] Length = 744 Score = 98.8 bits (245), Expect = 3e-19 Identities = 37/267 (13%), Positives = 89/267 (33%), Gaps = 37/267 (13%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + E +I +D V +I GS + + + +++ Sbjct: 197 FEERMQKLIEEIRQAENVILFIDEVHEIVGAGSAGDGNMDAGNILKPALARGELQMVGAT 256 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + Q D P++E ++ E V+ T +E Sbjct: 257 TLNEYRIIEKDAALERRMQPVRVDEPTVEETI--SILKGLQKRYEDYHHVKYTDEAIEAA 314 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R + A D L D+ + +L ++ IE+ +L++AE Sbjct: 315 ATLSNRYVQDRFLPDKAID--LLDETGSKKNLTIQIVD-PKTIEK-----KLQEAEE--- 363 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-----QYLFEELKAQ 449 + A RE + +K K++ + E + E++ + Sbjct: 364 --QKVLASREED-------FEKAAYYRDQINKLQKMKERQLTEEETPVITEKDMEKI-VE 413 Query: 450 ENSQCDFDPMKMRMESEIRGLLKGMEM 476 + + +K + +++++ L ++ Sbjct: 414 QRTGIPVGELKEKEQTQLKNLADDLKA 440 >AAA_CLPB_199-393_PF00004.17 Length = 195 Score = 98.8 bits (245), Expect = 3e-19 Identities = 16/143 (11%), Positives = 44/143 (30%), Gaps = 13/143 (9%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 E +K+V + + +I +D + + ++ + + + I Sbjct: 54 EFEERIKNVLKKVKSSE--GKIILFIDEIHTVVGAGATGGSLDASNLLKPMLARGELRCI 111 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ+ ++PS+++ ++ E+ V+ + Sbjct: 112 GATTINEHKQNIEKDPALERRFQKIKINAPSVDDTI--SILRGLREKYEVHHSVRISDNA 169 Query: 331 MEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 170 LVAAASLSERYINDRFLPDKAID 192 >gi|55655772|ref|XP_531442.1| PREDICTED: similar to intersectin 1 isoform ITSN-l; SH3 domain protein-1A; human intersectin-SH3 domain-containing protein SH3P17; Src homology 3 domain-containing protein [Pan troglodytes] Length = 1229 Score = 98.8 bits (245), Expect = 3e-19 Identities = 49/259 (18%), Positives = 86/259 (33%), Gaps = 49/259 (18%) Query: 226 KDVFQHCAPNWDFEALIKELDFVRKIFRG--SEDARGKKLFWKADELIEK---LKSKLID 280 +++ + W+ + L+ K A+ K L ++ + L +K L+ KL D Sbjct: 407 RELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQD 466 Query: 281 PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN------EIAEVVQDTARKMEVV 334 C QE +S + S E Q + Q +++ V Sbjct: 467 --IRCRLTTQR-QEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQV 523 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 + + R L R LE K ++ RQ+ + Q++E+E R K E D+F Sbjct: 524 QQNSL-----HRDSLVTLKRALEAK-------ELARQQLRDQLDEVEKETRSKLQEIDIF 571 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + E R + K + EAE +Q K QE Sbjct: 572 NNQLKELRE-----------------IHNKQQLQKQKSMEAERLKQ------KEQERKII 608 Query: 455 DFDPMKMRMESEIRGLLKG 473 + + K + + K Sbjct: 609 ELEKQKEEAQRRAQERDKQ 627 Score = 47.1 bits (111), Expect = 0.001 Identities = 32/267 (11%), Positives = 74/267 (27%), Gaps = 44/267 (16%) Query: 252 FRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLI 311 F + ++ + ++ + L + + + QE + Sbjct: 350 FEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKEHKNEEFFDAAKREL 409 Query: 312 APQD----ACNEIAEVVQDTARKMEVVAEEKMR------MFKKARSVLDACDRELEDKAC 361 Q N E++ ++ E + K + + + +L+D C Sbjct: 410 ERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRC 469 Query: 362 AVTDLKMERQK--KKPQIEELE----------------SIVRLKQAEADMFQ-------- 395 +T + E + K ++ E ++ KQ D + Sbjct: 470 RLTTQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQVQQNSLH 529 Query: 396 -------LKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 +A EA+ A + E R + ++L+ Sbjct: 530 RDSLVTLKRALEAKELARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 589 Query: 449 QENSQCDFDPMKMRMESEIRGLLKGME 475 Q++ + + + E +I L K E Sbjct: 590 QKSMEAE-RLKQKEQERKIIELEKQKE 615 Score = 46.4 bits (109), Expect = 0.002 Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 12/133 (9%) Query: 278 LIDPLDACNFILMFFQECDSDSP-SLENGEGGFLIAPQDACNEIAEVV-QDTARKMEVVA 335 + L + Q+ + P + E+ + + + + + ++ E +A Sbjct: 325 VDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLA 384 Query: 336 E----EKMRMFKKARSVLDACDRELEDKAC------AVTDLKMERQKKKPQIEELESIVR 385 + E+ R K DA RELE + +L +R K++ I L++ + Sbjct: 385 QLERAEQERKEHKNEEFFDAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKK 444 Query: 386 LKQAEADMFQLKA 398 + E + K Sbjct: 445 TLEFELEALNDKK 457 Score = 46.0 bits (108), Expect = 0.002 Identities = 21/140 (15%), Positives = 44/140 (31%), Gaps = 18/140 (12%) Query: 263 LFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAE 322 L L++K + + E + ++ S F EI Sbjct: 529 HRDSLVTLKRALEAKELARQQ----LRDQLDEVEKETRSKLQEIDIFN-NQLKELREI-H 582 Query: 323 VVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKK----KPQIE 378 Q ++ + AE + ++ + + ELE + ER K+ Q + Sbjct: 583 NKQQLQKQKSMEAERLKQKEQERKII------ELEKQKEEAQRRAQERDKQWLEHVQQED 636 Query: 379 ELESIVRLKQAEADMFQLKA 398 E + +L E + + + Sbjct: 637 EHQRPRKL--HEEEKLKREE 654 >gi|5921798|sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-binding subunit clpA homolog Length = 819 Score = 98.8 bits (245), Expect = 3e-19 Identities = 26/198 (13%), Positives = 57/198 (28%), Gaps = 32/198 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + + +I +D V + + + + Sbjct: 255 EFEERLKKIIDEIRVANNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEMQCIGAT 314 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + + FQ PS+E ++ E + + + Sbjct: 315 TLEEYRKHIEKDSALERRFQPVMVGEPSVEETI--EILYGLRDRYEKHHKLVISDEALSA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQ 388 A+ + DR L DKA A + +++ + P EL+ +R Sbjct: 373 AAKFADQYI---------ADRFLPDKAIDLIDEAGSRVRLMNSQLPPAARELDKELREIL 423 Query: 389 AEADMFQLKADEARREAE 406 + DEA R + Sbjct: 424 -------KQKDEAVRSQD 434 >gi|19748664|gb|AAL98096.1| putative ATP-dependent protease [Streptococcus pyogenes MGAS8232] Length = 760 Score = 98.4 bits (244), Expect = 4e-19 Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 19/186 (10%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + + +I +D + +I GS + + + +L+ Sbjct: 214 FEERMQKLMEEIRNRKDVILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLVGAT 273 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + Q D PS+E ++ E V+ + +E Sbjct: 274 TLNEYRIIEKDAALERRMQPVKVDEPSVEETIT--ILKGIQPKYEDYHHVKYSPAAIEAA 331 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R + A D L D+A + +L + +I++ RL +AE Sbjct: 332 AHLSNRYIQDRFLPDKAID--LLDEAGSKMNLTLNFVD-PKEIDK-----RLIEAENLKA 383 Query: 395 QLKADE 400 Q DE Sbjct: 384 QATRDE 389 >gi|56961903|ref|YP_173625.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus clausii KSM-K16] Length = 818 Score = 98.4 bits (244), Expect = 4e-19 Identities = 27/193 (13%), Positives = 57/193 (29%), Gaps = 20/193 (10%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + +I +D + + + + + + I Sbjct: 262 EFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGAT 321 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D P+++ E ++ E V T +E Sbjct: 322 TLDEYRKYIEKDAALERRFQPIQVDEPTID--ESIQILYGLRDRYEAHHRVTITDEAVEE 379 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 + R A D L D A + +++ P ++ELE+ + E Sbjct: 380 AVKLSDRYISDRFLPDKAID--LID--EAASKVRLRSYTAPPNLKELEAKL-----EETR 430 Query: 394 FQLKADEARREAE 406 + A +E E Sbjct: 431 KEKDASVQSQEFE 443 >gi|14194530|sp|Q9PKA8|CLPC_CHLMU Probable ATP-dependent Clp protease ATP-binding subunit Length = 870 Score = 98.4 bits (244), Expect = 4e-19 Identities = 29/252 (11%), Positives = 71/252 (28%), Gaps = 43/252 (17%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + ++ +D + I + + + + I Sbjct: 300 FEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASHILKPALARGEIQCIGATT 359 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ+ PS++ ++ E V T + Sbjct: 360 LDEYRKHIEKDAALERRFQKIVVQPPSVDETV--EILRGLKKKYEEHHNVFITDEALVAA 417 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A+ + A D L D A +++ + ++ +AE + Sbjct: 418 AKLSDQYVHGRFLPDKAID--LLD--EAGARVRVNTMGQPSEL-------LRLEAEIEST 466 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLK-LRLSEAEERRQYLFEELKAQENSQ 453 + ++A T +Y K L + E++ + +K Q S Sbjct: 467 KQAKEQA--------------------IGTQEYEKAASLRDEEKKLREKLSNMKQQWESN 506 Query: 454 CDFDPMKMRMES 465 + + + E+ Sbjct: 507 KEEHQVPVDEEA 518 >gi|73955094|ref|XP_546507.2| PREDICTED: similar to golgi autoantigen, golgin subfamily a, 4 [Canis familiaris] Length = 1970 Score = 98.0 bits (243), Expect = 5e-19 Identities = 41/231 (17%), Positives = 81/231 (35%), Gaps = 31/231 (13%) Query: 243 KELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFIL------MFFQECD 296 + L +R + S +A +L + + ++KL+ +L A L M Q + Sbjct: 1191 QRLSQLRAQVQSSAEADEGRLRAEQEASLQKLREELESLQKAERASLEQRSRQMLEQLKE 1250 Query: 297 SDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 S + + + A ++ E +Q ++ E ++ R+ LD L Sbjct: 1251 EMEASEKREQAALNAEKEAALRQLREQLQGERKEAVAALE------REHRAELDRLSSSL 1304 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 E K V ++ ++ Q EE + L AE Q + E E Sbjct: 1305 EAKHREVVSSLQKKIEEAQQKEETQLQESLSWAEQRAQQKVHQVLQYEQEL--------- 1355 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEI 467 S L+ + E E + +++K + Q + + E+E+ Sbjct: 1356 --------SGLLREKRQEVEREHERKLDKMKEEH--QQVVAEAREQYEAEV 1396 Score = 56.4 bits (135), Expect = 2e-06 Identities = 36/254 (14%), Positives = 86/254 (33%), Gaps = 19/254 (7%) Query: 228 VFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI-DPLDACN 286 + E ++E + + + + + L+ + + ++ + + Sbjct: 1316 QKKIEEAQQKEETQLQESLSWAEQRAQQKVHQVLQYEQELSGLLREKRQEVEREHERKLD 1375 Query: 287 FILMFFQECDSDSPSLENGEGGFLI------APQDACNEIAEVVQDTARKMEVVAEEKMR 340 + Q+ + + P + E++ R++E + + R Sbjct: 1376 KMKEEHQQV-VAEAREQYEAEVKVYPRRCGWLPLQERKQRTELLGHLTRELERLRKSHER 1434 Query: 341 MFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIE-ELESIVRLKQAEADMFQLKAD 399 + +V DR+LED E+++K +E ELE+ + +A+ L+ + Sbjct: 1435 ELE---AVRQTQDRQLEDLRRR----HREQERKLQDLEVELETRTKDVKAKLAQLDLQEE 1487 Query: 400 EARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPM 459 ARRE + + L EA++ +L E + + Sbjct: 1488 TARREQQQLLDVQRQVVLKSQEATANH---QHLDEAKKEHTHLLESNQQLRKLLDELRAH 1544 Query: 460 KMRMESEIRGLLKG 473 K+ +ES++ L Sbjct: 1545 KLELESQVDALQTQ 1558 Score = 44.8 bits (105), Expect = 0.005 Identities = 24/173 (13%), Positives = 55/173 (31%), Gaps = 7/173 (4%) Query: 234 PNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQ 293 P + + + L + + + + + + + + +L D Q Sbjct: 1407 PLQERKQRTELLGHLTRELERLRKSHER----ELEAVRQTQDRQLEDLRRRHREQERKLQ 1462 Query: 294 ECDSD-SPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDAC 352 + + + ++ + +A D E A Q ++ K + LD Sbjct: 1463 DLEVELETRTKDVKAK--LAQLDLQEETARREQQQLLDVQRQVVLKSQEATANHQHLDEA 1520 Query: 353 DRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 +E + L+ + + ELES V Q ++ Q + + EA Sbjct: 1521 KKEHTHLLESNQQLRKLLDELRAHKLELESQVDALQTQSQRLQKQVSDLEAEA 1573 >gi|68003568|ref|ZP_00536114.1| AAA ATPase, central region:Clp, N terminal [Geobacter metallireducens GS-15] Length = 878 Score = 98.0 bits (243), Expect = 5e-19 Identities = 39/260 (15%), Positives = 71/260 (27%), Gaps = 36/260 (13%) Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNFILMF 291 +I +D I G + + + S+ + + Sbjct: 291 IILFIDEAHTIIGAGGQTGGGDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARR 350 Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 FQ D P +E ++ E A V + AE R Sbjct: 351 FQPVKLDEPDVE--TAVLILRGLKEKYEAAHGVTIRDDGIRAAAELSSRYL--------- 399 Query: 352 CDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEAR---R 403 R+L DKA A +K+ K +EE E ++ + E R Sbjct: 400 SGRQLPDKAVDLLDTAAARVKLLLTGKPGAVEEKERRIQALEREEAAMARDQLHGRPVDD 459 Query: 404 EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQENSQCDFDPMKM 461 E T+++ + + AE R+ L E + E+ + Sbjct: 460 ERLDLLKAELLTLREELAAVTARWHREQELAAEVMALRKELSTEAEENED-RRGLKRQVT 518 Query: 462 RMESEIRG-----LLKGMEM 476 + + L +E+ Sbjct: 519 EATARLAEFQGDAPLVRIEV 538 >gi|33239685|ref|NP_874627.1| ATPases with chaperone activity, ATP-binding subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 924 Score = 98.0 bits (243), Expect = 5e-19 Identities = 40/276 (14%), Positives = 81/276 (29%), Gaps = 47/276 (17%) Query: 224 FVKDVFQHCAPNWDFE----ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 F + + D I ELD + R S DA ++ + + I Sbjct: 309 FEERLRSVLKEASDPNAGVVLFIDELDTILNTERSSTDAG-----NLLKPVLANGEIRCI 363 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ+ PS++ ++ E V+ + Sbjct: 364 GATTPDNYRRTIEKDQALNRRFQKVLIKEPSID--LSVEILRGIKERYETHHEVKISDEA 421 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQ-- 388 + R A D L D A +KME K IEE E ++ + Sbjct: 422 LITANRLADRYISDRCLPDKAID--LID--EAAAQIKMESTSKPKIIEETELGLKQLENI 477 Query: 389 ----------AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER 438 + + D + ++ E K + L + ++ Sbjct: 478 LLNDKGVDPLINIEEINREKDLSTKKLE----------ELMQQWSQEKSILEELRDLSQQ 527 Query: 439 RQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 +Y+ E ++ + Q + + E+ L + + Sbjct: 528 EKYIKESVEEAQQ-QGELEEAARLQFDELHHLERKI 562 >gi|34904048|ref|NP_913371.1| P0489G09.12 [Oryza sativa (japonica cultivar-group)] Length = 606 Score = 98.0 bits (243), Expect = 5e-19 Identities = 20/100 (20%), Positives = 31/100 (31%), Gaps = 23/100 (23%) Query: 130 ACQNLLPADDCDCDICSNKKGFCNLC--------MCVICSKFDFASNTCRWIGCDVCSHW 181 C N LP + ++ C C C IC K ++ W+ CD C W Sbjct: 513 ICGNRLPCKIASKKKQAGERLLCRHCDKLLQSKQYCGICKKIWHHTDGGNWVCCDECQIW 572 Query: 182 CHTDCAIREGLIKMGHSAKGASGMTEML---FHCIACNHT 218 H +C + M ++ + C C Sbjct: 573 VHVECD------------QTCIKMEDLENADYFCPDCKSK 600 >AAA_CLPB_199-393_PF00004.17 Length = 195 Score = 98.0 bits (243), Expect = 5e-19 Identities = 13/141 (9%), Positives = 32/141 (22%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + + + + + + + I Sbjct: 54 EFEERLKAVVNEVTGAEGEIILFIDEIHTLVGAGKSEGAMDAANILKPALARGELRAIGA 113 Query: 282 LD---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + FQ D P + ++ E V+ + Sbjct: 114 TTLDEYRKYFEKDKALERRFQMVMVDEP--DELSSISILRGLKEKYENHHKVRIKDDAII 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 + R + A D Sbjct: 172 AAVKLSHRYITERFLPDKAID 192 >gi|28897788|ref|NP_797393.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Vibrio parahaemolyticus RIMD 2210633] Length = 756 Score = 98.0 bits (243), Expect = 5e-19 Identities = 31/172 (18%), Positives = 56/172 (32%), Gaps = 15/172 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLKSKLIDPL 282 F K E I +D + I + G L+ K + I Sbjct: 266 FEKRFKSILKQLEKEEDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKLRCIGST 325 Query: 283 D---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + FQ+ D PSL++ ++ E V+ T + + Sbjct: 326 TYQEYSNIFEKERALSRRFQKIDVVEPSLDDT--TKILMGLKPKYEAHHEVRYTNKALRA 383 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIV 384 E + + A D + D+A A + L R+KK + ++E++V Sbjct: 384 AVELSAKYINERHLPDKAID--VIDEAGARSRLAPASRRKKTVGVADIEAMV 433 >gi|46400786|emb|CAF24235.1| probable endopeptidase ATP-binding chain clpC [Parachlamydia sp. UWE25] Length = 847 Score = 98.0 bits (243), Expect = 5e-19 Identities = 31/233 (13%), Positives = 65/233 (27%), Gaps = 30/233 (12%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + ++ +D + I + + + + I Sbjct: 282 FEERIKAVMDEIKKNGNVLLFIDELHTIVGAGAAEGAIDASNILKPALSRGELQCIGATT 341 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ+ PS+++ ++ E V T + + Sbjct: 342 IDEYRKHIEKDAALERRFQKILVAPPSVDDTI--EILYGLKPEYEKHHKVIFTNQAIRAA 399 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R A D L D A L++ + I + ES + EA Sbjct: 400 AVLSDRYIHGRFLPDKAID--LID--EAGAKLRISMMNQPQDISKYES-----EIEATRL 450 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + ++E E K L+ +L + + EE + Sbjct: 451 AKEESIGKQEYEKAAKLRD----------KEKTLREQLQQIRAEWEINKEEHE 493 >gi|76165587|gb|EAO59719.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chloroflexus aurantiacus J-10-fl] Length = 826 Score = 98.0 bits (243), Expect = 5e-19 Identities = 22/187 (11%), Positives = 54/187 (28%), Gaps = 16/187 (8%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + + + + + ++I Sbjct: 258 EFEERLKAVMDEVRNAKGRIILFIDELHTVVGAGAATGSIDASNMLKPALSRGEIQVIGA 317 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + F + P E ++ E + + + Sbjct: 318 TTIDEYRKHVEKDAALERRFSPVFVEEPDPETTV--EMLRGLRKRYEEHHQLTISDEALR 375 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R A D L D+A A L+++ P+++ E + QAE + Sbjct: 376 AAVQLSSRYINDRFLPDKAID--LIDEASA--KLRIDIFSMPPELKAKEEELTRLQAEEE 431 Query: 393 MFQLKAD 399 + D Sbjct: 432 EAGARRD 438 >gi|68351395|gb|EAN32158.1| hypothetical protein, conserved [Theileria parva] Length = 3588 Score = 97.6 bits (242), Expect = 6e-19 Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 24/123 (19%) Query: 128 NIACQNLLPADDCDCD--ICSN--KKG----FCNLC--------MCVICSKFDFASNTC- 170 + C C C++ G FC C C IC K +T Sbjct: 1202 SWKCDYCTQCISCGYRDITCADYLNWGLFFFFCLKCWELLERSNYCGICYKVWTNFDTSS 1261 Query: 171 -RWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVF 229 +W+ C+ C W H +C LI S++ + + C+ C ++F K + Sbjct: 1262 QKWVQCEGCKLWIHIECDDLARLITDCPSSRNQN------YRCLICRSEDKMFRCTKALE 1315 Query: 230 QHC 232 Q Sbjct: 1316 QIF 1318 >AAA_CLPB2_202-397_PF00004.17 Length = 196 Score = 97.6 bits (242), Expect = 6e-19 Identities = 16/127 (12%), Positives = 37/127 (29%), Gaps = 12/127 (9%) Query: 237 DFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP---------LDACN 286 ++ +D + + G+ ++ + + + I ++ Sbjct: 69 SEGQIVLFIDELHTVVGAGANQNSSMDASNLLKPMLARGELRCIGATTLDEYRKYIEKDA 128 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR 346 + FQ+ PS+E+ ++ EI V+ T + A R Sbjct: 129 ALERRFQQVYIGQPSVEDTI--SILRGLKDRYEIHHNVKITDSALVAAAMLSDRYISDRY 186 Query: 347 SVLDACD 353 A D Sbjct: 187 LPDKAID 193 >gi|48871265|ref|ZP_00323981.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pediococcus pentosaceus ATCC 25745] Length = 821 Score = 97.6 bits (242), Expect = 7e-19 Identities = 29/197 (14%), Positives = 63/197 (31%), Gaps = 17/197 (8%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + + +I +D + + + + + Sbjct: 261 EFEDRLKKVIEEIRNDGQVIVFIDELHTLIGAGGAEGAIDASNILKPALARGELQTIGAT 320 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ ++A + F + + D P+ E ++ E V+ + ++ Sbjct: 321 TLTEYQKYIEADAALERRFAKVEVDEPT--EAEAVQILRGIRPKYEEHHQVKISDDAIQQ 378 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDL-KMERQ-KKKPQIEELESIVRLKQAEA 391 R A D L D+A A + E+Q KK + LE + K+ Sbjct: 379 AVTLSSRYIADRFLPDKAID--LIDEAAAKIRIDASEKQVKKVTDEDRLEKLRTAKEEAI 436 Query: 392 DM--FQLKADEARREAE 406 D F+ AD ++E + Sbjct: 437 DNQDFEKAADIRKKEMK 453 >gi|52003130|gb|AAU23072.1| ATP-dependent Clp protease-like (class III stress gene) ClpE [Bacillus licheniformis ATCC 14580] Length = 698 Score = 97.6 bits (242), Expect = 7e-19 Identities = 32/251 (12%), Positives = 76/251 (30%), Gaps = 42/251 (16%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + Q + + I +D + + + + + ++I Sbjct: 166 FEERMKQLMKELKERKNAILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATT 225 Query: 282 ------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ + FQ P++E + ++ E V T ++ Sbjct: 226 LKEYRQIEKDAALERRFQPIMVHEPTIE--QAAAILNGLKEKYEAYHDVTYTDEAIKACV 283 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ 395 R + A D L D+A + +LK++ + + L+ I K A Q Sbjct: 284 ILSSRYIQDRHLPDKAID--LLDEAGSKANLKIDTVSGEQASQRLQEIEAEK---AKALQ 338 Query: 396 LKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD 455 + E L +L + EE E + ++ + + Sbjct: 339 EENYE---------------------------LAAKLRDEEEALHKKMESHEEEKRATVE 371 Query: 456 FDPMKMRMESE 466 + ++ +E + Sbjct: 372 AEDIQAIIEQK 382 >gi|3218360|emb|CAA19619.1| clp protease ATP binding subunit [Streptomyces coelicolor A3(2)] Length = 842 Score = 97.6 bits (242), Expect = 7e-19 Identities = 24/189 (12%), Positives = 46/189 (24%), Gaps = 34/189 (17%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG--------------------KKLFWK 266 D+ A + ++ + R D Sbjct: 270 DLTGVVAGTRYRGDFEERMNNIVGEIRAHSDELIIFIDELHTVVGAGGGGESGSMDAGNI 329 Query: 267 ADELIEKLKSKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN 318 + + + ++ ++ + FQ P+ + ++ Sbjct: 330 LKPALARGELHIVGATTLEEYRRIEKDAALARRFQPILVPEPTTAD--AIEILRGLRDRY 387 Query: 319 EIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIE 378 E V+ T + E R R A D L D+A A L+ K + Sbjct: 388 EAHHQVRYTDEALVAAVEMSDRYLTDRRLPDKAID--LIDQAGARVRLRAR--TKGTDVR 443 Query: 379 ELESIVRLK 387 LE V Sbjct: 444 ALEREVDQL 452 >gi|55656928|ref|XP_514872.1| PREDICTED: similar to intersectin 1 isoform ITSN-l; SH3 domain protein-1A; human intersectin-SH3 domain-containing protein SH3P17; Src homology 3 domain-containing protein [Pan troglodytes] Length = 2090 Score = 97.2 bits (241), Expect = 8e-19 Identities = 49/259 (18%), Positives = 86/259 (33%), Gaps = 49/259 (18%) Query: 226 KDVFQHCAPNWDFEALIKELDFVRKIFRG--SEDARGKKLFWKADELIEK---LKSKLID 280 +++ + W+ + L+ K A+ K L ++ + L +K L+ KL D Sbjct: 452 RELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQD 511 Query: 281 PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN------EIAEVVQDTARKMEVV 334 C QE +S + S E Q + Q +++ V Sbjct: 512 --IRCRLTTQR-QEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQV 568 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 + + R L R LE K ++ RQ+ + Q++E+E R K E D+F Sbjct: 569 QQNSL-----HRDSLVTLKRALEAK-------ELARQQLRDQLDEVEKETRSKLQEIDIF 616 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + E R + K + EAE +Q K QE Sbjct: 617 NNQLKELRE-----------------IHNKQQLQKQKSMEAERLKQ------KEQERKII 653 Query: 455 DFDPMKMRMESEIRGLLKG 473 + + K + + K Sbjct: 654 ELEKQKEEAQRRAQERDKQ 672 Score = 46.4 bits (109), Expect = 0.002 Identities = 32/267 (11%), Positives = 74/267 (27%), Gaps = 44/267 (16%) Query: 252 FRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLI 311 F + ++ + ++ + L + + + QE + Sbjct: 395 FEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKEHKNEEFFDAAKREL 454 Query: 312 APQD----ACNEIAEVVQDTARKMEVVAEEKMR------MFKKARSVLDACDRELEDKAC 361 Q N E++ ++ E + K + + + +L+D C Sbjct: 455 ERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQDIRC 514 Query: 362 AVTDLKMERQK--KKPQIEELE----------------SIVRLKQAEADMFQ-------- 395 +T + E + K ++ E ++ KQ D + Sbjct: 515 RLTTQRQEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQVQQNSLH 574 Query: 396 -------LKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 +A EA+ A + E R + ++L+ Sbjct: 575 RDSLVTLKRALEAKELARQQLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQK 634 Query: 449 QENSQCDFDPMKMRMESEIRGLLKGME 475 Q++ + + + E +I L K E Sbjct: 635 QKSMEAE-RLKQKEQERKIIELEKQKE 660 Score = 46.0 bits (108), Expect = 0.002 Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 12/133 (9%) Query: 278 LIDPLDACNFILMFFQECDSDSP-SLENGEGGFLIAPQDACNEIAEVV-QDTARKMEVVA 335 + L + Q+ + P + E+ + + + + + ++ E +A Sbjct: 370 VDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLA 429 Query: 336 E----EKMRMFKKARSVLDACDRELEDKAC------AVTDLKMERQKKKPQIEELESIVR 385 + E+ R K DA RELE + +L +R K++ I L++ + Sbjct: 430 QLERAEQERKEHKNEEFFDAAKRELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKK 489 Query: 386 LKQAEADMFQLKA 398 + E + K Sbjct: 490 TLEFELEALNDKK 502 Score = 45.2 bits (106), Expect = 0.003 Identities = 21/140 (15%), Positives = 44/140 (31%), Gaps = 18/140 (12%) Query: 263 LFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAE 322 L L++K + + E + ++ S F EI Sbjct: 574 HRDSLVTLKRALEAKELARQQ----LRDQLDEVEKETRSKLQEIDIFN-NQLKELREI-H 627 Query: 323 VVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKK----KPQIE 378 Q ++ + AE + ++ + + ELE + ER K+ Q + Sbjct: 628 NKQQLQKQKSMEAERLKQKEQERKII------ELEKQKEEAQRRAQERDKQWLEHVQQED 681 Query: 379 ELESIVRLKQAEADMFQLKA 398 E + +L E + + + Sbjct: 682 EHQRPRKL--HEEEKLKREE 699 >gi|30841496|gb|AAP34402.1| CDC42-binding protein kinase beta [Mus musculus] Length = 1713 Score = 97.2 bits (241), Expect = 8e-19 Identities = 42/279 (15%), Positives = 97/279 (34%), Gaps = 33/279 (11%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALI----------KELDFVRKIFRGSEDARGKKLFWK 266 ++ +++ Q A L +E + GS A G K Sbjct: 426 KDEDVQRDLENSLQIEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSTRALGNSNRDK 485 Query: 267 ----ADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIA- 321 +E +E++KSK+ D Q D+ + E+ + + + +A Sbjct: 486 EIKRLNEELERMKSKMADSNRLER------QLEDTVTLRQEHEDSTHRLKGLEKQYRLAR 539 Query: 322 EVVQDTARKMEVVAE---EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIE 378 + ++ +++ +E + + K A +E + +++L+ +QK Q+ Sbjct: 540 QEKEELHKQLVEASERLKSQTKELKDAHQQRKRALQEFSELNERMSELRSLKQKVSRQLR 599 Query: 379 ELES--IVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE 436 + E V +++ ++ L+ E R+ + L+ Sbjct: 600 DKEEEMEVAMQKIDSMRQDLRKSEKSRKEL-----EARLEDAAAEASKERKLREHSESFC 654 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRME-SEIR-GLLKG 473 ++ + E LK ++ + + + E S+IR L K Sbjct: 655 KQMERELEALKVKQGGRGPGAASEHQQEISKIRSELEKK 693 Score = 42.1 bits (98), Expect = 0.028 Identities = 44/308 (14%), Positives = 95/308 (30%), Gaps = 55/308 (17%) Query: 216 NHTSELFGFVKDVFQHCAPNWDF----EALIKELD---FVRKIFRGSE--------DARG 260 EL ++D + E+ K+++ K+ +G Sbjct: 624 KSRKELEARLEDAAAEASKERKLREHSESFCKQMERELEALKVKQGGRGPGAASEHQQEI 683 Query: 261 KKLFWKADELI----EKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDA 316 K+ + ++ + E+L + + + + +S +L+ + + Sbjct: 684 SKIRSELEKKVLFYEEELVRREASHVLEVKNVKKEVHDSESHQLALQKEVLMLKDKLEKS 743 Query: 317 CNEIAEVVQDTARKMEVVAEEKMRMFKKARS--------------------VLDACDREL 356 E ++ E + K + ++ L A +R+L Sbjct: 744 KRERHSEME------EAIGTVKDKYERERAMLFDENKKLTAENEKLCSFVDKLTAQNRQL 797 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 ED+ + K + QI E+ V ++ Q A + E E Sbjct: 798 EDELQDLASKKESVAHWEAQIAEIIQWVSDEKDARGYLQALASKMTEELETLRSSSLGSR 857 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMK----------MRMESE 466 + KL +S E + L E++A++ Q + +K E++ Sbjct: 858 TLDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVQEELRKVKDSSLAFESKLKESEAK 917 Query: 467 IRGLLKGM 474 R LL+ M Sbjct: 918 NRELLEEM 925 >gi|15487810|gb|AAL00952.1| chaperone ATP-dependent protease [Lactobacillus sakei] Length = 709 Score = 97.2 bits (241), Expect = 8e-19 Identities = 22/188 (11%), Positives = 48/188 (25%), Gaps = 22/188 (11%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + + + + + +LI Sbjct: 265 EFEDRLKKIIEEIHEDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQLIGAT 324 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + F D P+ E+ ++ E + + + Sbjct: 325 TLDEYQKYIEKDAALERRFATVTVDEPTPED--AEQILRGLRPRYEEHHGITISDEALHE 382 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 R A D L D+A A L QK + + E Sbjct: 383 AVVLANRYITNRFLPDKAID--LMDEAAAKVRLDAVNQKSP---------IDRLETELQS 431 Query: 394 FQLKADEA 401 + + A Sbjct: 432 LAKEKEVA 439 >gi|62665845|ref|XP_228081.3| PREDICTED: similar to Disco-interacting protein 2 homolog [Rattus norvegicus] Length = 4882 Score = 97.2 bits (241), Expect = 8e-19 Identities = 43/221 (19%), Positives = 82/221 (37%), Gaps = 18/221 (8%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 L + + + +L+ L +L Q+C+ + ++ +A ++ E Sbjct: 443 ANLQKEKETALTELREMLNGRRAQELALLQSRQQCELELMREQHAREKEEMALRNEQ-ET 501 Query: 321 AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME------RQKKK 374 AE+ + +ME + + + S + C L + A +ME +++ Sbjct: 502 AELKEKFRSEMEKTVQMMETLKQDWESERELCLETLRKELSAKHQSEMEGLQNQFQKELS 561 Query: 375 PQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE 434 Q ELE I + K EA++ LK EA+ +A L L Sbjct: 562 EQKAELEKIFQAKH-EAEV-SLKNLEAQHQAAIRKLQEDLRSEHCQY-----LQDLELRF 614 Query: 435 AEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 E+ + E E Q ++ +K + + EIR L +E Sbjct: 615 REKEKAKELE----LETLQASYEDLKAQSQEEIRHLWSQLE 651 Score = 48.3 bits (114), Expect = 4e-04 Identities = 30/251 (11%), Positives = 81/251 (32%), Gaps = 40/251 (15%) Query: 229 FQHCAPNWDFEALIKELDFVRKI-FRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNF 287 +H D +++ R E + +L + + +L + L Sbjct: 2683 LKHERAAKDNLQKELQIEASRCEALLAQEKGQLSELRKSLEAERSR-SLELSEALQHERL 2741 Query: 288 ILMFFQECDSDSPSLENGEGGF-LIAPQD-ACNEIAEVVQDTARKMEVVAE--------- 336 + ++ + ++ + L+ E+ + + A Sbjct: 2742 LTEQLSRNAQEACARQDTQAQHALLRKLKAEKARALELEAMLEKVQKQAAHTQQQLEAQA 2801 Query: 337 ----EKMRMFKK----ARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQ 388 ++R K+ RS +DA ++ C + + + + ++E+L + V+ ++ Sbjct: 2802 QERCLELRREKEVSGNLRSAVDALQTHKQELGCCLEREREKAAWLQAELEQLSARVKQQE 2861 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYL--KLRLSEAEERRQYLFEEL 446 A D ++ +R + + K+ K +L E E +RQ ++ Sbjct: 2862 ARQDEKRMDRRSSREDLD-----------------KRKWQRVKEKLRELELQRQRDEHKI 2904 Query: 447 KAQENSQCDFD 457 + + + Sbjct: 2905 EQLQRLVRELR 2915 Score = 44.1 bits (103), Expect = 0.008 Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 12/174 (6%) Query: 312 APQDACNEIAEVVQDT----ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDL- 366 + ++ V+ +M +++ + ++ R A DR + A L Sbjct: 1360 KQLEDARQLHRCVEKEFRHRDEEMAQAVQKQQELLERLREESAAKDRLALELHTAEGLLE 1419 Query: 367 --KMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYT 424 K+E+ + + + E + E + + + +A RE Sbjct: 1420 GFKVEKADLQEALGKKEESEQQLIVELEDLRKQLQQASRELLTLKEENSVLWNQKETFTN 1479 Query: 425 SKYLKLRLS--EAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + + A L +E+++ Q + + E + LL M + Sbjct: 1480 EAKEREAGTPVSAGREDAALQKEVESLTRDQWESRK---QSEKDRATLLSQMRV 1530 Score = 40.6 bits (94), Expect = 0.090 Identities = 37/234 (15%), Positives = 72/234 (30%), Gaps = 28/234 (11%) Query: 243 KELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSL 302 +EL +R F + + + + L + KL D L FQ+ Sbjct: 675 EELQHLRSDFAQQQQQERAQHESELEHLRVYFEKKLNDAEKTYQEDLTVFQQ-------- 726 Query: 303 ENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACA 362 Q+A E E + E R K+ LD + + + Sbjct: 727 ---------RLQEAREESLESAEIRYSSCMFPEETSGRERKEPPDPLDLQLEQPKAQGS- 776 Query: 363 VTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKAD-EARREAEXXXXXXXXXXXXXXX 421 + + ++ E + L + E + +A+ E RE Sbjct: 777 ------LIEDYQEKLSNAEEKIELMKQEFQ--KKEAEWELSREDLKRDAEEKLASMFLEL 828 Query: 422 XYTSKYLKLRLSEAEERRQYLFEELKAQENSQ-CDFDPMKMRMESEIRGLLKGM 474 ++ KL + E R+ L+ Q+ +Q D + + +R L + + Sbjct: 829 REKAESEKLSIINRFELRESSMRHLQDQQAAQISDLERSLREQQGHLRQLEQEL 882 Score = 38.7 bits (89), Expect = 0.35 Identities = 34/255 (13%), Positives = 83/255 (32%), Gaps = 24/255 (9%) Query: 231 HCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS---KLIDPLDACNF 287 ++++ +++ F+ E + EKL S +L + ++ Sbjct: 778 IEDYQEKLSNAEEKIELMKQEFQKKEAEWELSREDLKRDAEEKLASMFLELREKAESEKL 837 Query: 288 -ILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEE--KMRMFKK 344 I+ F+ +S L++ + + + + E ++ +++ + Sbjct: 838 SIINRFELRESSMRHLQDQQAAQISDLERSLREQQGHLRQLEQELTRDEVLLCSQCGKEP 897 Query: 345 ARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 + + + L +K L + + + +E+ E D F L E Sbjct: 898 SVAQDEKSAILLREKEDCALQLLTAQNRFLEERKEIMEKFAK---EQDAFLLDTQEKHSH 954 Query: 405 AEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD-----FDPM 459 + + L LR+ + L E+L + E+ Q M Sbjct: 955 ----------ELQLLQQGHQQQLLALRMELETKHHSELTEQLASLESKQQALLETHVAKM 1004 Query: 460 KMRMESEIRGLLKGM 474 +++ ++EI L K Sbjct: 1005 QVKHDAEISALEKRH 1019 Score = 38.7 bits (89), Expect = 0.38 Identities = 41/264 (15%), Positives = 87/264 (32%), Gaps = 39/264 (14%) Query: 241 LIKELDFVRKIFRGSEDARGKKLFW-KADELIEKLKSKLIDPLDACNFILMFFQECDSDS 299 +E+ ++ R + R + + L EKL+ KL + + Q+ Sbjct: 1587 FQQEIKWLEGQLRQATRPRPPGPRDSQVELLQEKLREKLDGFNELVIKKDLADQQLLIQE 1646 Query: 300 PSLENGEG--GFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE 357 +++ E + E E + + ++EVV + ++ +++++ E Sbjct: 1647 EEIKHLEETNENIQRQMAQLQEELEKQRRSTEELEVV-NSRNSEIEELKAIIEHLQENQE 1705 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRL----------------------KQAEADMFQ 395 A + E ++ IE+L+S + L QAE Q Sbjct: 1706 QLQKAKAE---EIEQLHEVIEKLQSELSLMGPTVHEMSDLPPGSLHTELSCLQAEGMGGQ 1762 Query: 396 LKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK---AQENS 452 +E + A+ + L+ RL +AE EL+ A + Sbjct: 1763 ALHNEL-QAAQAAKGAFGQLLADHGHSQALEALQERLQDAEAAAARHLTELEHCVALRQA 1821 Query: 453 QCDFDPMKMRMESEIRGLLKGMEM 476 + + M S I+ ++ Sbjct: 1822 EVEA------MASRIQEFEATLKA 1839 Score = 37.9 bits (87), Expect = 0.63 Identities = 26/183 (14%), Positives = 67/183 (36%), Gaps = 19/183 (10%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADEL-IEKLKSKLIDPLD 283 + + ++ + + +RK+ +E AR +L +++ + ++ Sbjct: 2743 TEQLSRNAQEACARQDTQAQHALLRKL--KAEKARALELEAMLEKVQKQAAHTQQQLEAQ 2800 Query: 284 ACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC--NEIAEVVQDTARKMEV-------- 333 A L +E + + + C E ++E Sbjct: 2801 AQERCLELRREKEVSGNLRSAVDALQTHKQELGCCLEREREKAAWLQAELEQLSARVKQQ 2860 Query: 334 -VAEEKMRMFKKARSVLDACDRE--LEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 +++ RM RS + D+ K + +L+++RQ+ + +IE+L+ +VR + + Sbjct: 2861 EARQDEKRM--DRRSSREDLDKRKWQRVK-EKLRELELQRQRDEHKIEQLQRLVRELRWK 2917 Query: 391 ADM 393 + Sbjct: 2918 EEA 2920 >AAA_CLPB_201-394_PF00004.17 Length = 194 Score = 97.2 bits (241), Expect = 8e-19 Identities = 14/140 (10%), Positives = 32/140 (22%), Gaps = 11/140 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + +I +D + I + + + Sbjct: 54 EFEDRLKKVVEEVKKAGNVILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGAT 113 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + + + FQ + P++ E ++ E V + Sbjct: 114 TLKEYRKYFEKDAALQRRFQPIFLNEPTIN--EALQILRGIKERLEAHHNVTIYDSALVA 171 Query: 334 VAEEKMRMFKKARSVLDACD 353 A+ R A D Sbjct: 172 AAKLSSRYITDRYLPDKAID 191 >gi|28869739|ref|NP_792358.1| clpB protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 867 Score = 97.2 bits (241), Expect = 9e-19 Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 15/173 (8%) Query: 237 DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACNF 287 + I +D + +A G + + + ++ + Sbjct: 274 SPGSFILFIDEAHTLIGAGANAGGSDAANILKPALARGELRTIAATTWAEYRQYFEKDPA 333 Query: 288 ILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARS 347 + FQ P++E + ++ E + V + A R + Sbjct: 334 LARRFQPVRVLEPTVE--QAVTILRGLAPLYEQSHGVYLRDDAVVAAARLSARYISGRQL 391 Query: 348 VLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE 400 A D L D ACA +++ ++E L S + +Q + Q AD Sbjct: 392 PDKAID--LLDTACA--RVQISLVAVPERLEHLRSEMVQQQRHLEAVQRDADA 440 >AAA_CLPB_201-394_PF00004.17 Length = 194 Score = 96.8 bits (240), Expect = 1e-18 Identities = 20/147 (13%), Positives = 38/147 (25%), Gaps = 20/147 (13%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + +I +D + I + + + Sbjct: 54 EFEERLKNVVDEVKKAGNIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGAT 113 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + + + FQ + + PS+ E ++ E V T + Sbjct: 114 TLKEYRKYFEKDAALTRRFQPINVNEPSIN--EALQILRGIKPNLEAHHNVNITDAALVA 171 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA 360 A+ R DR L DKA Sbjct: 172 AAKLSSRYI---------TDRFLPDKA 189 >gi|55631422|ref|XP_520008.1| PREDICTED: plectin 1 [Pan troglodytes] Length = 5175 Score = 96.8 bits (240), Expect = 1e-18 Identities = 47/251 (18%), Positives = 92/251 (36%), Gaps = 25/251 (9%) Query: 229 FQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFI 288 E +EL+ R++ G+ R L + + + + +++ + Sbjct: 2584 KAEEQAVRQRELAEQELEKQRQLAEGTAQQR---LAAEQELIRLRAETEQGE-------- 2632 Query: 289 LMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSV 348 Q + + L+ Q+ E+A+V +MEV+ K R +++RS Sbjct: 2633 -QQRQLLEEELARLQREAAAATQKRQELEAELAKV----RAEMEVLLASKARAEEESRST 2687 Query: 349 LDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXX 408 + + LE +A +L E + + EE + +L AE D + +A+ R AE Sbjct: 2688 SEKSKQRLEAEAGRFRELAEEAARLRALAEEAKRQRQL--AEEDAARQRAEAERVLAEKL 2745 Query: 409 XXXXXXXXXXXXXXYTSKYLK------LRLSEAEERRQYLFEELKAQENSQCDFDPMKMR 462 K + RL+E E ++ EE AQ + + ++R Sbjct: 2746 AAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLR 2805 Query: 463 MESEIRGLLKG 473 S+ L + Sbjct: 2806 KASD-SELERQ 2815 Score = 80.3 bits (197), Expect = 1e-13 Identities = 32/240 (13%), Positives = 77/240 (32%), Gaps = 13/240 (5%) Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQE----- 294 ++E + + + R E R ++ ++ + ++ A Q Sbjct: 2248 RRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEV 2307 Query: 295 CDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDR 354 + +++ + I + + + A+ + A E+ R+ + + Sbjct: 2308 VRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRL-- 2365 Query: 355 ELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXX 414 +LE + E Q + + EE E+ R Q EA+ + + + + Sbjct: 2366 QLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELAS 2425 Query: 415 XXXXXXXXYTSK------YLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIR 468 K +LRL E R+ E++ Q + + E+E++ Sbjct: 2426 RVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQ 2485 Score = 68.3 bits (166), Expect = 5e-10 Identities = 40/260 (15%), Positives = 93/260 (35%), Gaps = 30/260 (11%) Query: 229 FQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFI 288 Q + L+ R++ A+ + +A EL ++++ +++ +A Sbjct: 2259 QQRAEERERLAEVEAALEKQRQLAEAHAQAKA-QAEREAKELQQRMQEEVVRREEAAVDA 2317 Query: 289 LMFFQECDSDSPSLENGEGGFLIAP-------QDACNEIAEVVQDTARKMEVV------A 335 + + L + A + + I E ++ ++E A Sbjct: 2318 QQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEATERQRGGA 2377 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTD-LKMERQKKKPQIEELESIVRLKQAEADMF 394 E +++ + +A R+ +++A + ++ E Q+K+ EL S V+ +AEA Sbjct: 2378 EGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELASRVKA-EAEAARE 2436 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + +A +A E +LR +E E RQ AQ +++ Sbjct: 2437 KQRALQALEELR--------------LQAEEAERRLRQAEVERARQVQVALETAQRSAEA 2482 Query: 455 DFDPMKMRMESEIRGLLKGM 474 + + + L + + Sbjct: 2483 ELQSKRASFAEKTAQLERSL 2502 Score = 66.8 bits (162), Expect = 1e-09 Identities = 48/298 (16%), Positives = 91/298 (30%), Gaps = 52/298 (17%) Query: 227 DVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACN 286 Q A + +E+ VR +E RG + L + + A Sbjct: 2342 KARQAEAAERSRLRIEEEIRVVRLQLEATERQRGG-AEGELQALRARAEEAEAQKRQAQE 2400 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV---AEEKMRMFK 343 ++ D + L + A E A Q + +E + AEE R + Sbjct: 2401 EAERLRRQVQ-DESQRKRQAEAELASRVKAEAEAAREKQRALQALEELRLQAEEAERRLR 2459 Query: 344 KARSVLDACDR-ELE-DKACAVTDLKMERQKKKPQIEELESIVRLKQA------------ 389 +A + LE + A +L+ +R + +LE ++ + Sbjct: 2460 QAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERR 2519 Query: 390 ----------------EADMFQLKADEARREAE----------------XXXXXXXXXXX 417 E + +QLKA+EA R Sbjct: 2520 AQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREA 2579 Query: 418 XXXXXYTSKYLKLR-LSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 + ++ R L+E E +Q E AQ+ + + +++R E+E + + Sbjct: 2580 RRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQL 2637 Score = 59.9 bits (144), Expect = 1e-07 Identities = 34/266 (12%), Positives = 88/266 (33%), Gaps = 21/266 (7%) Query: 218 TSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKK--------LFWKADE 269 +E + Q + ++EL ++ A + L +A++ Sbjct: 3119 KAEATEAARQRSQVEEELFSVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEK 3178 Query: 270 LIEKLKS--KLIDPLDACNFILMFFQECDSDSPSL------ENGEGGFLIAPQDACNEI- 320 + + + +L + +E + +L E + A E+ Sbjct: 3179 MKQVAEEAARLSVAAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELL 3238 Query: 321 AEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEEL 380 + + + + E+K +M ++ R LE + ++ E ++ K ++ E+ Sbjct: 3239 QQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEM 3298 Query: 381 ESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ 440 + +A F+ +A+E + T + + + ER + Sbjct: 3299 SRAQARAEEDAQRFRKQAEEIGEKL---HRTELATQEKVTLVQTLEIQRQQSDHDAERLR 3355 Query: 441 YLFEELK-AQENSQCDFDPMKMRMES 465 EL+ +E Q + ++++ E Sbjct: 3356 EAIAELEHEKEKLQQEAKLLQLKSEE 3381 Score = 56.0 bits (134), Expect = 2e-06 Identities = 33/251 (13%), Positives = 70/251 (27%), Gaps = 65/251 (25%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 K + +EL +R ++ + DE +++LK++ + Sbjct: 3074 EKHKKFAEQTLRQKAQVEQELTTLRLQLEETDHQK-----NLLDEELQRLKAEATEAA-- 3126 Query: 285 CNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKK 344 + + + S+ ++ A E K Sbjct: 3127 -----RQRSQVEEELFSVRVQMEE--LSKLKARIEAENRALILRDK-------------- 3165 Query: 345 ARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 D R L+++A + + E + +E + +L AE D+ Q +A Sbjct: 3166 -----DNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQL--AEEDLAQQRA------ 3212 Query: 405 AEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER-----RQYLFEELKAQENSQ-CDFDP 458 K LK ++ +E L ++ K Q Sbjct: 3213 ------------------LAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQE 3254 Query: 459 MKMRMESEIRG 469 K +M ++ Sbjct: 3255 DKEQMAQQLAE 3265 Score = 54.1 bits (129), Expect = 9e-06 Identities = 29/214 (13%), Positives = 56/214 (26%), Gaps = 30/214 (14%) Query: 270 LIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIA-EVVQDTA 328 I+ + L + E +E + Q E + Sbjct: 2239 YIKFISETLRRMEEEERLAEQQRAEERERLAEVEAA-----LEKQRQLAEAHAQAKAQAE 2293 Query: 329 RKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK----MERQKKKPQIEELESIV 384 R+ + + + + ++ + L+ E Q K Q E E Sbjct: 2294 REAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSR 2353 Query: 385 RLKQAEAD--MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL 442 + E QL+A E +R + L+ R EAE +++ Sbjct: 2354 LRIEEEIRVVRLQLEATERQR---------------GGAEGELQALRARAEEAEAQKRQA 2398 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 EE + + R L ++ Sbjct: 2399 QEEAERL---RRQVQDESQRKRQAEAELASRVKA 2429 Score = 41.7 bits (97), Expect = 0.040 Identities = 35/173 (20%), Positives = 57/173 (32%), Gaps = 49/173 (28%) Query: 308 GFLIAPQDACNEIAEVVQDTARKM---EVVAEEKMRMFKKARSVLDACDRELEDKACAVT 364 + + +AE + R+ A EK R +A A Sbjct: 2244 SETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAH---------------AQA 2288 Query: 365 DLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYT 424 + ER+ K+ Q E +VR ++A D Q K Sbjct: 2289 KAQAEREAKELQQRMQEEVVRREEAAVDAQQQKR-----------------------SIQ 2325 Query: 425 SKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 + +LR S +E Q + +A E S+ +R+E EIR + +E T Sbjct: 2326 EELQQLRQS-SEAEIQAKARQAEAAERSR-------LRIEEEIRVVRLQLEAT 2370 >gi|73748009|ref|YP_307248.1| ATP-dependent Clp protease, ATP-binding subunit [Dehalococcoides sp. CBDB1] Length = 824 Score = 96.8 bits (240), Expect = 1e-18 Identities = 28/261 (10%), Positives = 74/261 (28%), Gaps = 46/261 (17%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D + + + + ++I Sbjct: 258 EFEERLKKVIEEIKNAGNIILFIDEFHTMVGAGAAEGAVDAANILKPSLARGEVQVIGAT 317 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ + P++E+ ++ E + + + Sbjct: 318 TLDDFRKYVERDAALERRFQPVLVEEPAIEDT--LSILRGIKERYEEHHKLIISDEAIIA 375 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR--LKQAEA 391 A R A D L D A + ++++++ K ++E+++I + EA Sbjct: 376 AANMAARYIPDRFLPDKAID--LVD--EAASRVRIKKRTKPVSLKEMKAIEDSYRRDKEA 431 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQEN 451 + + D A E + E+ E Sbjct: 432 ALATQQYDYASELRE-------------------------RELQIAEKIRRMEDEWQTEQ 466 Query: 452 SQCDFDPMKMRMESEIRGLLK 472 + + E +I ++ Sbjct: 467 AMD----KPVVGEEDIAQVVS 483 >gi|62526947|ref|ZP_00388255.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Streptococcus thermophilus LMD-9] Length = 752 Score = 96.8 bits (240), Expect = 1e-18 Identities = 27/186 (14%), Positives = 59/186 (31%), Gaps = 19/186 (10%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D + +I + + + +L+ Sbjct: 202 FEERMQKLMEEIRQRQDVILFIDEIHEIVGAGNTGDGNMDAGNILKPALARGELQLVGAT 261 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + Q D P++E ++ + V+ T + Sbjct: 262 TLNEYRIIEKDAALERRMQPVKVDEPTVEETIT--ILRGIQPKYQDYHHVKYTDEAITAA 319 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 AE R + A D L D++ + +L + I+ + RL +AE Sbjct: 320 AELSNRYIQDRFLPDKAID--LLDESGSKMNLTLNF------IDPKDLDKRLIEAENLKA 371 Query: 395 QLKADE 400 Q DE Sbjct: 372 QATRDE 377 >gi|48788396|ref|ZP_00284375.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Burkholderia fungorum LB400] Length = 961 Score = 96.8 bits (240), Expect = 1e-18 Identities = 29/182 (15%), Positives = 52/182 (28%), Gaps = 18/182 (9%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKL-----------FWKADEL 270 F + V Q + L+ +D V I + L + + + Sbjct: 338 EFEERVRQVMDEIAAHKDQLVLFVDEVHTIVGAGQGGGEGGLDIANVFKPPMARGELNLI 397 Query: 271 IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ ++ + FQ PS+E G ++ E V Sbjct: 398 GATTLAEYQKYIEKDAALERRFQPVLVGEPSVEQTIG--ILRGLRDRLEAHHKVTILDEA 455 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 AE R A D L D A + + ++ ELES + + E Sbjct: 456 CVAAAELSDRYVTGRFLPDKAVD--LID--QAAAREHLSSTSRPAEVLELESEIAQIRRE 511 Query: 391 AD 392 + Sbjct: 512 QE 513 >AAA_CLPB_204-397_PF00004.17 Length = 194 Score = 96.8 bits (240), Expect = 1e-18 Identities = 19/147 (12%), Positives = 40/147 (27%), Gaps = 20/147 (13%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + I +D + + + + + + + Sbjct: 54 EFEERFKKVLYAVSKDNNTILFIDELHVMVGAGKTDGSMDASNMIKPKLARGELHCVGAT 113 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ+ P++EN ++ E+ V T + Sbjct: 114 TLDEYSRYIEKDAALERRFQKIFIIEPNIENTIA--ILRGLKERYELHHNVHITDPAIVA 171 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR+L DKA Sbjct: 172 AATLSNRYI---------SDRQLPDKA 189 >AAA_HSP78_128-322_PF00004.17 Length = 195 Score = 96.8 bits (240), Expect = 1e-18 Identities = 17/147 (11%), Positives = 36/147 (24%), Gaps = 21/147 (14%) Query: 224 FVKDVFQHCAPNWDFEAL-IKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + I +D + + + + K Sbjct: 55 FESKLKSILKEVEEKNGKVILFIDEFHLLMGLGKAEGSIDASNLLKPALARGKLSMCGAT 114 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + F + P+ E+ ++ E+ V+ + Sbjct: 115 TIEEYRKYVEKDAALARRFSPVTVNEPTGEDTI--SILRGLKERYEVHHGVRIMDSALVT 172 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA 360 A R DR L DKA Sbjct: 173 AALYSNRYI---------TDRFLPDKA 190 >gi|14133241|dbj|BAA86438.2| KIAA1124 protein [Homo sapiens] Length = 1760 Score = 96.4 bits (239), Expect = 1e-18 Identities = 43/280 (15%), Positives = 98/280 (35%), Gaps = 35/280 (12%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALI----------KELDFVRKIFRGSEDA----RGKK 262 ++ ++ Q A L +E + GS A K Sbjct: 475 KDEDVQRDLEHSLQMEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSSRALSNSNRDK 534 Query: 263 LFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNE-IA 321 K +E IE+LK+K+ D Q D+ + E + + + + + Sbjct: 535 EIKKLNEEIERLKNKIADSNRLER------QLEDTVALRQEREDSTQRLRGLEKQHRVVR 588 Query: 322 EVVQDTARKMEVVAE---EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIE 378 + ++ +++ +E + + K A +E + + +L+ ++QK Q+ Sbjct: 589 QEKEELHKQLVEASERLKSQAKELKDAHQQRKLALQEFSELNERMAELRAQKQKVSRQLR 648 Query: 379 ELES--IVRLKQAEADM-FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA 435 + E V ++ +A +A++ R+E E + L+ Sbjct: 649 DKEEEMEVATQKVDAMRQEMRRAEKLRKELE------AQLDDAVAEASKERKLREHSENF 702 Query: 436 EERRQYLFEELKAQENSQCDFDPMKMRME-SEIR-GLLKG 473 ++ + E LK ++ + ++ + E S+I+ L K Sbjct: 703 CKQMESELEALKVKQGGRGAGATLEHQQEISKIKSELEKK 742 Score = 46.8 bits (110), Expect = 0.001 Identities = 46/328 (14%), Positives = 92/328 (28%), Gaps = 67/328 (20%) Query: 216 NHTSELFGFVKDVFQHCAPNWDFEALIKELDFVR------KIFRGSEDARGKKLFWKADE 269 + E+ + V E L KEL+ + + + Sbjct: 649 DKEEEMEVATQKVDAMRQEMRRAEKLRKELEAQLDDAVAEASKERKLREHSENFCKQMES 708 Query: 270 LIEKLKSKLIDPLDACNFILMFF---------QECDSDSPSLENGEGGFLIAPQDACNEI 320 +E LK K ++ L E ++ ++ E+ Sbjct: 709 ELEALKVKQGGRGAGATLEHQQEISKIKSELEKKVLFYEEELVRREASHVLEVKNVKKEV 768 Query: 321 AE--------VVQDT--ARKMEVVAEEKMRMFKKA-RSVLDACDRELEDKACAVTDLKME 369 + + K+E E+ ++A ++ D +RE L E Sbjct: 769 HDSESHQLALQKEILMLKDKLEKSKRERHNEMEEAVGTIKDKYERERAMLFDENKKLTAE 828 Query: 370 RQKKKPQIEELESIVRLKQAEAD--MFQLK------------------ADEAR------- 402 +K +++L + R + E + + +AR Sbjct: 829 NEKLCSFVDKLTAQNRQLEDELQDLAAKKESVAHWEAQIAEIIQWVSDEKDARGYLQALA 888 Query: 403 ----REAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDP 458 E E + KL +S E + L E++A++ Q + Sbjct: 889 SKMTEELEALRSSSLGSRTLDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVQEELRK 948 Query: 459 MK----------MRMESEIRGLLKGMEM 476 +K E++ R LL+ ME+ Sbjct: 949 VKDANLTLESKLKDSEAKNRELLEEMEI 976 Score = 44.8 bits (105), Expect = 0.005 Identities = 25/190 (13%), Positives = 53/190 (27%), Gaps = 18/190 (9%) Query: 301 SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA-EEKMRMFKKARSVLDACDR----- 354 E L E + VQ ++ + + KK ++ Sbjct: 497 RRLEQEKLELSRKLQ---ESTQTVQSLHGSSRALSNSNRDKEIKKLNEEIERLKNKIADS 553 Query: 355 -ELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARR------EAEX 407 LE + L+ ER+ ++ LE R+ + E + + EA + Sbjct: 554 NRLERQLEDTVALRQEREDSTQRLRGLEKQHRVVRQEKEELHKQLVEASERLKSQAKELK 613 Query: 408 XXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKAQENSQCDFDPMKMRMES 465 + +LR + + + + EE++ R E Sbjct: 614 DAHQQRKLALQEFSELNERMAELRAQKQKVSRQLRDKEEEMEVATQKVDAMRQEMRRAEK 673 Query: 466 EIRGLLKGME 475 + L ++ Sbjct: 674 LRKELEAQLD 683 Score = 41.7 bits (97), Expect = 0.041 Identities = 35/248 (14%), Positives = 85/248 (34%), Gaps = 42/248 (16%) Query: 225 VKDVFQHCAPNWDFEALIK-ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI---D 280 VK+V + + + ++ E+ ++ S+ R + +E + +K K Sbjct: 761 VKNVKKEVHDSESHQLALQKEILMLKDKLEKSKRER----HNEMEEAVGTIKDKYERERA 816 Query: 281 PLDACNFILMFFQEC---DSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEE 337 L N L E D + +N + + A E + ++ + Sbjct: 817 MLFDENKKLTAENEKLCSFVDKLTAQNRQLEDELQDLAAKKESVAHWEAQIAEIIQWVSD 876 Query: 338 KMRMFKKARSVLDACDRELEDKACAVTDLKME--------RQKKKPQIEELESIVRL--K 387 + K AR L A ++ ++ A+ + + ++ +++ + Sbjct: 877 E----KDARGYLQALASKMTEELEALRSSSLGSRTLDPLWKVRRSQKLDMSARLELQSAL 932 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 +AE QL +E R+ + L+ +L ++E + + L EE++ Sbjct: 933 EAEIRAKQLVQEELRKVKDANLT-----------------LESKLKDSEAKNRELLEEME 975 Query: 448 AQENSQCD 455 + + Sbjct: 976 ILKKKMEE 983 >gi|26990034|ref|NP_745459.1| chaperone-associated ATPase, putative [Pseudomonas putida KT2440] Length = 940 Score = 96.4 bits (239), Expect = 1e-18 Identities = 41/250 (16%), Positives = 73/250 (29%), Gaps = 43/250 (17%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARG-----------KKLFWKADEL 270 F + V + LI +D V I + + + + Sbjct: 375 EFEERVQKVLKEIAEHQGELILFIDEVHTIVGAGQGGGEGGLDVANVFKPMMARGELNLI 434 Query: 271 IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ ++ + FQ P++ ++ E V T Sbjct: 435 GATTLNEYQKYIEQDAALERRFQPVVVPEPTVAQTIM--ILRGLRDTFEAHHKVSITEEA 492 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVR 385 + AE R R L DKA A +K+ + ++E+ES + Sbjct: 493 IIAAAELSDRYV---------SARFLPDKAIDLLDQAAARVKLSATARPVAVQEMESELH 543 Query: 386 LKQAEAD--MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLF 443 + E D + + D A + T LK R+ E E R Sbjct: 544 QLRREQDYAASRKQYDNAAQ-------------ISKRVEATEAELKQRVEEWERERGSGS 590 Query: 444 EELKAQENSQ 453 E+KA+ +Q Sbjct: 591 TEVKAEHVAQ 600 >gi|50589882|ref|ZP_00331357.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Streptococcus suis 89/1591] Length = 666 Score = 96.4 bits (239), Expect = 1e-18 Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 21/192 (10%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D + +I GS + + + +L+ Sbjct: 218 FEERMQKLMEEIRNRREIILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGEMQLVGAT 277 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + Q + PS+E ++ + V+ + +E Sbjct: 278 TLNEYRIIEKDAALERRMQPVKVEEPSVEETIT--ILKGIQNKYQDYHHVKYSDAAIEAA 335 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVRLKQAEADM 393 A R + A D L D+A + +L + +I++ RL AE Sbjct: 336 AVLSNRYIQDRFLPDKAID--LLDEAGSKMNLTLNFID--PKEIDQ-----RLIDAENRK 386 Query: 394 FQLKADEARREA 405 Q DE +A Sbjct: 387 AQATRDEDYEKA 398 >AAA_Q8XHP1_209-402_PF00004.17 Length = 194 Score = 96.4 bits (239), Expect = 1e-18 Identities = 18/140 (12%), Positives = 39/140 (27%), Gaps = 11/140 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + D + +I +D + I + + + + I Sbjct: 54 EFEERLKKVLNEVKDSDDIILFIDEMHNIVGAGGAEGAIDASNILKPALARGEIQCIGAT 113 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + + FQ PS E+ ++ E+ V+ T +E Sbjct: 114 TTDEYRKNIEKDSALERRFQPVVVKEPSKEDSVL--ILKGLREKYEVHHNVKLTDEAIEA 171 Query: 334 VAEEKMRMFKKARSVLDACD 353 R A D Sbjct: 172 AVNLSSRYITDRFLPDKAID 191 >gi|59711606|ref|YP_204382.1| ATP-dependent protease subunit [Vibrio fischeri ES114] Length = 860 Score = 96.4 bits (239), Expect = 1e-18 Identities = 41/257 (15%), Positives = 76/257 (29%), Gaps = 46/257 (17%) Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDACNFILMF 291 +I +D + A + + + + I ++ + Sbjct: 281 IILFIDEAHTLIGAGGQAGSNDAANLLKPALARGELRTIGATTWSEYKKYIEKDPALARR 340 Query: 292 FQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDA 351 FQ + P++ + ++ E + V + AE R + A Sbjct: 341 FQPVKVNEPNV--TQAITILRGLAERYEESHGVYVRDDAIIAAAELSARYISGRQLPDKA 398 Query: 352 CDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXX 411 D L D ACA +K+ + K +E RL A + E Sbjct: 399 ID--LLDTACA--RVKINLKAKPESLE------RLLHI----------IAITQRELDCVL 438 Query: 412 XXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQEN------------SQCDFDPM 459 T LK +LS+ + L +E + Q+ +QC+ + Sbjct: 439 RDQQAGINIEENTITLLKEKLSQTHLDAEQLEQEWQTQKELAEALLTSRIDIAQCNDEEE 498 Query: 460 KMRM---ESEIRGLLKG 473 K R+ + EI L Sbjct: 499 KHRLICNQQEIHQALSD 515 >gi|1314297|gb|AAC44446.1| ClpC ATPase Length = 825 Score = 96.4 bits (239), Expect = 2e-18 Identities = 25/185 (13%), Positives = 55/185 (29%), Gaps = 25/185 (13%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + +I +D + + + + + + I Sbjct: 255 EFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGAT 314 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D P++E E ++ E V T +E Sbjct: 315 TLDEYRKYIEKDRALERRFQPIKVDEPTVE--ESIQILHGLRDRYEAHHRVAITDEALEA 372 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQ 388 R DR L DKA + + ++++ ++E+E+ + + Sbjct: 373 AVRLSDRYI---------SDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLK 423 Query: 389 AEADM 393 E D Sbjct: 424 KEKDA 428 >gi|33236295|gb|AAP98384.1| class III stress response-related ATPase [Chlamydophila pneumoniae TW-183] Length = 845 Score = 96.1 bits (238), Expect = 2e-18 Identities = 33/261 (12%), Positives = 71/261 (27%), Gaps = 28/261 (10%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + ++ +D + I + + + + I Sbjct: 281 FEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASNILKPALARGEIQCIGATT 340 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ+ PS++ ++ E V T ++ Sbjct: 341 IDEYRKHIEKDAALERRFQKIVVHPPSVDETI--EILRGLKKKYEEHHNVFITEEALKAA 398 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A + A D L D A +++ + + +LE+ + E Sbjct: 399 ATLSDQYVHGRFLPDKAID--LLD--EAGARVRVNTMGQPTDLMKLEA-----EIENTKL 449 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL---FEELKAQEN 451 + +E E + ++ + ++ EE AQ Sbjct: 450 AKEQAIGTQEYE-----KAAGLRDEEKKLRERLQSMKQEWENHKEEHQVPVDEEAVAQVV 504 Query: 452 SQCDFDPMKMRMESEIRGLLK 472 S P E+E LLK Sbjct: 505 SLQTGIPSARLTEAESEKLLK 525 >gi|4838526|gb|AAD31026.1| EH-domain/SH3-domain containing protein [Rattus norvegicus] Length = 1146 Score = 96.1 bits (238), Expect = 2e-18 Identities = 51/249 (20%), Positives = 84/249 (33%), Gaps = 48/249 (19%) Query: 226 KDVFQHCAPNWDFEALIKELDFVRKIFRG--SEDARGKKLFWKADELIEK---LKSKLID 280 +++ + W+ + L K G AR K L ++ + L +K L+ KL D Sbjct: 438 RELERQRQLEWERNRRQELLTQRNKDQEGIVVLKARRKTLEFELEALNDKKHQLEGKLQD 497 Query: 281 PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN------EIAEVVQDTARKMEVV 334 C QE +S + S E Q + Q + +++ V Sbjct: 498 --IRCRLATQR-QEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILSDQLKQV 554 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 + + R L R LE K ++ RQ+ + Q++E+E R K E D+F Sbjct: 555 QQNSL-----HRDSLLTLKRALEAK-------ELARQQLREQLDEVEKETRSKLQEIDVF 602 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-----ERRQYLFEELKAQ 449 + E R + K R EAE E+ + E K + Sbjct: 603 NNQLKELRE-----------------IHSKQQLQKQRSIEAERLKQKEQERKSLELEKQK 645 Query: 450 ENSQCDFDP 458 E Q Sbjct: 646 EEGQRRVQE 654 Score = 39.1 bits (90), Expect = 0.28 Identities = 20/140 (14%), Positives = 41/140 (29%), Gaps = 7/140 (5%) Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 E R + A + + + L+ Q++K + + + R + E + Sbjct: 354 RENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEKQLE 413 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-LSEAEERRQYLFEELKAQENSQ 453 + +RE E + + R L RRQ L + + Sbjct: 414 K------QRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLTQRNKDQEGI 467 Query: 454 CDFDPMKMRMESEIRGLLKG 473 + +E E+ L Sbjct: 468 VVLKARRKTLEFELEALNDK 487 >AAA_Q6FJ65_115-307_PF00004.17 Length = 193 Score = 96.1 bits (238), Expect = 2e-18 Identities = 16/140 (11%), Positives = 38/140 (27%), Gaps = 12/140 (8%) Query: 223 GFVKDVFQHCAPNWDFEAL-IKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + + I +D V + + + + + I Sbjct: 54 EFEERLKKVLEDIDKADGKVIVFIDEVHMLLGLGKTDGSMDASNILKPKLARG-LRCISA 112 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ + PS+++ ++ E+ V+ T + Sbjct: 113 TTIDEFKIIEKDPALTRRFQPILLNEPSVQDTI--SILRGLKERYEVHHGVRITDTALVS 170 Query: 334 VAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 171 AAVLSNRYINDRFLPDKAID 190 >gi|18203438|sp|Q9S5Z2|CLPE_LACLC ATP-dependent Clp protease ATP-binding subunit clpE Length = 748 Score = 96.1 bits (238), Expect = 2e-18 Identities = 29/187 (15%), Positives = 64/187 (34%), Gaps = 21/187 (11%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D + +I GS + + + +L+ Sbjct: 201 FEERMQKLMDEIRKRNDVIMFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLVGAT 260 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + Q D PS++ ++ A E V+ T +E Sbjct: 261 TLNEYRIIEKDAALERRMQPVKVDEPSVDETIT--ILRGIQARYEDYHHVKYTDEAIEAA 318 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R + A D L D++ + +L + K E++ + A+A+ Sbjct: 319 AHLSNRYIQDRFLPDKAID--LLDESGSKKNLTL----KFVDPEDINRRI----ADAESK 368 Query: 395 QLKADEA 401 + +A +A Sbjct: 369 KNEATKA 375 >gi|511145|emb|CAA51655.1| hemolysin [Brachyspira hyodysenteriae] Length = 828 Score = 96.1 bits (238), Expect = 2e-18 Identities = 21/180 (11%), Positives = 53/180 (29%), Gaps = 15/180 (8%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + +I +D + + + + + + I Sbjct: 265 EFEERIKNIVLEIKKASNIIIFIDELHTLIGAGGAEGALDAANMLKPALSRGEIQCIGAT 324 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ ++ FQ + + PS+E+ ++ E V+ T + Sbjct: 325 TINEYKKYIEKDGALVRRFQPINVEEPSIEDTI--EILNGIKGKYEEHHKVKYTDEAINA 382 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 A R + A D L D A + ++ + + ++LE + + Sbjct: 383 AAVLSKRYIFERHLPDKAID--LID--EAGSRARLLNMTRPQEFKDLEKKIEELNQQKKR 438 >gi|23480959|gb|EAA17380.1| clpB protein [Plasmodium yoelii yoelii] Length = 909 Score = 96.1 bits (238), Expect = 2e-18 Identities = 38/273 (13%), Positives = 84/273 (30%), Gaps = 24/273 (8%) Query: 216 NHTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL 274 TS F + +I +D + + + G ++ K Sbjct: 279 AGTSYRGEFENRMKNIIKELKNKKNKIILFVDEIHLLLGAGKAEGGVDAANLLKPVLSKG 338 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + KLI +++C+ F++ + PS+E ++ + E + Sbjct: 339 EIKLIGATTVTEYRKYIESCSAFERRFEKVIVEPPSVE--TAIKILRSLKSKYEKFYGIN 396 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + + + + K A D L +KAC+ L+++ K I+ E + Sbjct: 397 ITDKALVAAVKVSDKFIKDRFLPDKAID--LLNKACSF--LQVQLSGKPRVIDLTERYIE 452 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY----LKLRLSEAEERRQY 441 E + D+ ++ Y +Y +L+ ++ + Sbjct: 453 RLAYEISTLERDVDKVSKKKYSSLVEEFELKKEELKKYYEEYVTTGERLKR---KKEVEK 509 Query: 442 LFEELK-AQENSQCDFDPMKMRMESEIRGLLKG 473 ELK +N ++ + K Sbjct: 510 KLNELKDIAQNYINAGQEPPTELQESLNEAQKQ 542 >gi|22255857|gb|AAM94782.1| CalR4 [Micromonospora echinospora] Length = 797 Score = 95.7 bits (237), Expect = 2e-18 Identities = 32/257 (12%), Positives = 72/257 (28%), Gaps = 42/257 (16%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------- 276 F + + + +I +D + + ++ + + Sbjct: 224 FEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 283 Query: 277 --KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 + L+ + FQ PSL + ++ E V T + Sbjct: 284 LDEYRKHLEKDAALERRFQPIQVGEPSLAHTI--EILKGLRDRYEAHHRVSITDAALVAA 341 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R A D L D A +++ R P + + + + A+ Sbjct: 342 ATLADRYISDRFLPDKAID--LID--EAGARMRIRRMTAPPDLRDFDERI----AQVRRD 393 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + A +A+ + +LR E + Q + + + + Sbjct: 394 KESAIDAQ--------------------DFERAAQLRDKEKQLLGQK--AQREKEWKAG- 430 Query: 455 DFDPMKMRMESEIRGLL 471 D D + + +I +L Sbjct: 431 DLDVVSEVDDEQIAEVL 447 >AAA_Q97EC4_207-400_PF00004.17 Length = 194 Score = 95.7 bits (237), Expect = 2e-18 Identities = 19/140 (13%), Positives = 38/140 (27%), Gaps = 11/140 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + + +I +D + I + + + + I Sbjct: 54 EFEERLKKVMTEIKAAKNVILFIDEIHTIVGAGGAEGAIDASNILKPSLARGEIQCIGAT 113 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ D PS E E ++ E V+ T +E Sbjct: 114 TTEEYRRYIEKDAALERRFQPVDVGEPSKE--EAVQILEGLRDKYEAHHGVKITDDAIEA 171 Query: 334 VAEEKMRMFKKARSVLDACD 353 R + A D Sbjct: 172 AVNLSTRYIQDRFLPDKAID 191 >AAA_Q25317_200-394_PF00004.17 Length = 195 Score = 95.3 bits (236), Expect = 3e-18 Identities = 17/141 (12%), Positives = 37/141 (26%), Gaps = 12/141 (8%) Query: 223 GFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F + + + + +I + + + + L+ + Sbjct: 54 EFEERLKAVLNEVKESDNKIILFIVEIHLVLGAGKSDGAMDAANLLKPLLARGDVRTIGA 113 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ F PS+E E ++ E VQ T + + Sbjct: 114 TTLEEYRQYVEKDAAFERRFMPVQVHEPSVE--ECTSILRGLKDRYEQHHGVQITDKAVV 171 Query: 333 VVAEEKMRMFKKARSVLDACD 353 V A+ R A D Sbjct: 172 VAAQLAGRYITNRFLPDKAID 192 >gi|4980695|gb|AAD35290.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga maritima MSB8] Length = 820 Score = 95.3 bits (236), Expect = 3e-18 Identities = 27/192 (14%), Positives = 56/192 (29%), Gaps = 17/192 (8%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F K + + + +I +D + I + + + I Sbjct: 259 EFEKRMKKLLQIVTKDKNIILFIDEIHTIVGAGSAEGAIDAANILKPALARGEISCIGAT 318 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ+ P+ E ++ E V T + +E Sbjct: 319 TPDEYRRYIEKDAALERRFQKIYVKEPTEEET--LEILKGLKRKYEAHHKVIYTDKALEA 376 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEE--LESIVRLKQAEA 391 R A D + D+A A LK+ P++++ LE E Sbjct: 377 AVYLSKRYITDHYLPDKAID--VIDEAGARARLKVFV--LPPELKDMKLELERIRSDKEL 432 Query: 392 DMFQLKADEARR 403 + ++A + Sbjct: 433 AVLNQDYEKAAQ 444 >gi|45436048|gb|AAS61604.1| putative ATPase subunit of ATP-dependent protease [Yersinia pestis biovar Medievalis str. 91001] Length = 880 Score = 95.3 bits (236), Expect = 3e-18 Identities = 21/181 (11%), Positives = 43/181 (23%), Gaps = 25/181 (13%) Query: 230 QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLID 280 A ++ +D I A G + + + S+ Sbjct: 298 VIEAVQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQ 357 Query: 281 PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMR 340 + + FQ D P ++ ++ V + R Sbjct: 358 YFERDAALERRFQMVKVDEP--DDDTACLMLRGLKERYATHHGVHILDAAITAAVTLSRR 415 Query: 341 MFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ 395 R+L DKA A ++M + E+ + + E + Sbjct: 416 FL---------TGRQLPDKAVDLLDTAGARVRMSIDTLPTALMEINAELAALAMEQQAIE 466 Query: 396 L 396 Sbjct: 467 Q 467 >gi|34904046|ref|NP_913370.1| P0489G09.11 [Oryza sativa (japonica cultivar-group)] Length = 970 Score = 95.3 bits (236), Expect = 4e-18 Identities = 22/148 (14%), Positives = 39/148 (26%), Gaps = 29/148 (19%) Query: 130 ACQNLLPADDCDCDICSNKKGFCNLC--------MCVICSKFDFASNTCRWIGCDVCSHW 181 +C N +P + ++ C C C IC K ++ W+ CD C W Sbjct: 452 SCGNRVPPKIAKKKKQAGEQLLCRHCDKLLQSKQYCGICKKIWHHTDGGNWVCCDECQIW 511 Query: 182 CHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEAL 241 H +C + I M + + C C + P Sbjct: 512 VHVECDLT--CINM-------EDLENADYFCPDCKSK----------RKTVPPVEQMNT- 551 Query: 242 IKELDFVRKIFRGSEDARGKKLFWKADE 269 + ++ W+ Sbjct: 552 -PNSSEILCQCNSCKERLMSLSEWERHT 578 >AAA_Q85G08_202-395_PF00004.17 Length = 194 Score = 95.3 bits (236), Expect = 4e-18 Identities = 13/140 (9%), Positives = 37/140 (26%), Gaps = 11/140 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + + + +I +D V + + + + Sbjct: 54 EFEERLKKVMDEIREVGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 113 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + FQ P+++ ++ E V+ + +E Sbjct: 114 TLEEYRKHIEKDAALERRFQPVMVGEPTVDETI--EILKGLRDRYEEHHRVRISDAALEA 171 Query: 334 VAEEKMRMFKKARSVLDACD 353 A+ + A D Sbjct: 172 AAKLSSQYIADRYLPDKAID 191 >AAA_CLPB_199-393_PF00004.17 Length = 195 Score = 94.9 bits (235), Expect = 4e-18 Identities = 14/128 (10%), Positives = 37/128 (28%), Gaps = 11/128 (8%) Query: 235 NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP---------LDAC 285 +I +D + I + ++ + + ++I ++ Sbjct: 67 EESNGNIILFIDEIHTIVGAGKGEGSLDAGNMLKPMLARGELRVIGATTIDEYRKYIEKD 126 Query: 286 NFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKA 345 + FQ + P++++ ++ E V+ T + A R Sbjct: 127 PALERRFQTILVNEPNVDDTI--SILRGLKDKFETYHGVRITDTAIVEAATLSQRYISDR 184 Query: 346 RSVLDACD 353 + A D Sbjct: 185 KLPDKAID 192 >gi|37524374|ref|NP_927718.1| hypothetical protein plu0363 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 881 Score = 94.9 bits (235), Expect = 4e-18 Identities = 46/284 (16%), Positives = 78/284 (27%), Gaps = 62/284 (21%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F K +I +D + G + + + + K I Sbjct: 273 EFEKRFKGIMNEINQSSVPIILFIDEAHTLIGAGNQQGGLDISNLLKPALARGELKTIAA 332 Query: 282 LD---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + FQ P+ E E ++ A E + V ++ Sbjct: 333 TTWGEYKKYFEKDAALSRRFQLIKVAEPTAE--EAIIIMRGLRAIYEQSHGVLIDDEALK 390 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKAC-----AVTDLKMERQKKKPQIEELESIVRLK 387 A R R+L DKA A + + QI L++ + + Sbjct: 391 ASAVLSDRYL---------SGRQLPDKAIDVLDTACARVAINLTSPPRQISALKNQLHQQ 441 Query: 388 QAEADMFQLKA-----------DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE-- 434 Q E+D+ + DE R++ + T K L S Sbjct: 442 QMESDVLAREQRMGLNQHTDRLDELRQQQQET---------------TEKLAALEASWQQ 486 Query: 435 --------AEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGL 470 E RRQ L +E + ++ +M E I L Sbjct: 487 QQQLVQQIIELRRQLLTDETEFTNETKQSETSAEMTTEELIAQL 530 >gi|28378034|ref|NP_784926.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus plantarum WCFS1] Length = 739 Score = 94.9 bits (235), Expect = 4e-18 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 19/184 (10%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK-------- 275 F + + Q +I +D + +I G + + Sbjct: 201 FEQRMQQLMKEVQSNPNIILFIDEIHEIMGAGNAEGGMDAGNVLKPALARGDFQLVGATT 260 Query: 276 -SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ D ++ + FQ + PS+E E ++ E V+ + Sbjct: 261 LNEYRD-IEKDAALARRFQPVTVNEPSVE--ESIKILEGIQKKYEDYHHVKYDQDAIVAA 317 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVRLKQAEADM 393 + R + A D L D+A + +L ++ K Q E+++ + KQ D Sbjct: 318 VKLSNRYIQDRFLPDKAID--LLDEAGSRKNLTLKTVDPKTIQ-EKIDEAEKQKQ---DA 371 Query: 394 FQLK 397 + + Sbjct: 372 LKKE 375 >AAA_O69287_202-395_PF00004.17 Length = 194 Score = 94.9 bits (235), Expect = 4e-18 Identities = 21/147 (14%), Positives = 37/147 (25%), Gaps = 20/147 (13%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + E +I +D + I + + + Sbjct: 54 EFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILKPALARGELHTIGAT 113 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + + + FQ + PS+ E ++ EI V + Sbjct: 114 TLKEYRKYFEKDAALQRRFQPVNVGEPSVN--EALAMLRGIKEKLEIHHNVTINDSALVA 171 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA 360 A+ R DR L DKA Sbjct: 172 AAKLSKRYI---------TDRFLPDKA 189 >gi|69933402|ref|ZP_00628604.1| AAA ATPase, central region:Clp, N terminal [Paracoccus denitrificans PD1222] Length = 953 Score = 94.5 bits (234), Expect = 5e-18 Identities = 34/265 (12%), Positives = 70/265 (26%), Gaps = 47/265 (17%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKL-----------FWKADEL 270 F + V Q + L+ +D V I + L + + + Sbjct: 345 EFEERVKQLMDEITARKDELVLFIDEVHTIVGAGQGGGEGGLDIANTFKPAMARGEMNLI 404 Query: 271 IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ ++ + FQ PS++ ++ E V Sbjct: 405 GATTLAEYQKYIEKDAALEHRFQPVLVPEPSVDQTI--NILRGLRDSMEAHHKVTILDEA 462 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + AE R A D L D A + + + ++E E+ + + E Sbjct: 463 LVAAAELSDRYISGRFLPDKAID--LID--QAAARVHLSTTSRPADLQEAEAEIAGLRRE 518 Query: 391 AD-MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ 449 K + +E E R+ E E+ + + KA Sbjct: 519 QAYATSRKNFDKAKEFEA-----------------------RIGEREKDLEERTDAWKA- 554 Query: 450 ENSQCDFDPMKMRMESEIRGLLKGM 474 +I ++ + Sbjct: 555 ----RVGSSSAEVQVGDIADIVSKL 575 >gi|75187548|ref|ZP_00700815.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Escherichia coli E24377A] Length = 881 Score = 94.5 bits (234), Expect = 5e-18 Identities = 31/248 (12%), Positives = 64/248 (25%), Gaps = 32/248 (12%) Query: 236 WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLIDPLDACN 286 E ++ +D I A G + + + S+ + Sbjct: 305 KSPEPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDA 364 Query: 287 FILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKAR 346 + FQ D P ++ ++ A V ++ R Sbjct: 365 ALERRFQMVKVDEP--DDDTACLMLRGLKARYAQHHGVHMLDSAIQTAVRLSRRYL---- 418 Query: 347 SVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK---A 398 R+L DKA A ++M + +L + + E + + Sbjct: 419 -----TGRQLPDKAVDLLDTAGARVRMSLDTLPEPLTQLHARLAALDIEREAIEQDSVFY 473 Query: 399 DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE----ERRQYLFEELKAQENSQC 454 EA E ++Y + + + + EL+ Q + Sbjct: 474 PEASPERLAELIDLRDELQAEAGHLETQYQQEKRLAQQIMTLRQEGTDSTELQQQLRTHQ 533 Query: 455 DFDPMKMR 462 F P+ Sbjct: 534 GFAPLLAL 541 >gi|67984753|gb|EAM72758.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Kineococcus radiotolerans SRS30216] Length = 851 Score = 94.5 bits (234), Expect = 5e-18 Identities = 38/257 (14%), Positives = 72/257 (28%), Gaps = 42/257 (16%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + + +I +D + + ++ + + + I Sbjct: 279 FEERLRKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT 338 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + FQ P+L + ++ E V T + Sbjct: 339 LDEFRKHIEKDPALERRFQPIQVPEPTLAH--AIEILKGLRDRYEAHHRVSITDAALVAA 396 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 A R A D L D A L++ R P + E + + A+ Sbjct: 397 ATLADRYVNDRYLPDKAID--LID--EAGARLRIRRMTAPPDLREFDERI----ADVRRE 448 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + A +A+ K LR +E + Q E + Q S Sbjct: 449 KESAIDAQ--------------------DFEKAASLRDNEKKLLAQK--GEREKQWKSG- 485 Query: 455 DFDPMKMRMESEIRGLL 471 D D + E I +L Sbjct: 486 DMDVIAEVDEELIAEVL 502 >gi|50748728|ref|XP_421380.1| PREDICTED: similar to KIAA1124 protein [Gallus gallus] Length = 2398 Score = 94.5 bits (234), Expect = 5e-18 Identities = 44/299 (14%), Positives = 87/299 (29%), Gaps = 70/299 (23%) Query: 216 NHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRG-------SEDARGKK-LFWKA 267 +TS++ G+ K + + D ++E + +G + R K L + Sbjct: 743 KNTSQIEGYEKKIRKLEQEKQDLNRKLQESTQTVQSLQGPACVTVNTNRDREIKKLNEEI 802 Query: 268 DELIEKL--KSKLIDPLDACNFILMFFQECD------SDSPSLENGEGGFLIAPQ----- 314 + L KL SKL L ++C + E L Sbjct: 803 ERLKNKLTDVSKLEGQLADAVAFRQEHEDCMHKLKGLEKQCRVLRQEKEDLHKQLVEASE 862 Query: 315 ------DACNEIAEVVQDTARKMEVV-AEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 + + +E R + RS R+L DK V Sbjct: 863 RLKTQSKELRDAH----QQRKLAVQEFSELSER-MGELRSQKQKLSRQLRDKEEEVEMSL 917 Query: 368 MERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY 427 + + I + E I + +++ + + A +E + Sbjct: 918 QKNDAMRQDIRKSEKIRKELESQLEEVMAE---ASKERK--------------------- 953 Query: 428 LKLRLSEAEERRQYLFEELKAQENS---------QCDFDPMKMRMESEI----RGLLKG 473 L+ ++ + E LK ++ Q + MK +E +I L++ Sbjct: 954 LREHSEVFCKQLENELEALKVKQGGRAAGATLEHQQELSKMKAELEKKILFYEEELVRR 1012 Score = 52.5 bits (125), Expect = 2e-05 Identities = 46/313 (14%), Positives = 92/313 (29%), Gaps = 59/313 (18%) Query: 221 LFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELI-----EKL 274 + ++ + E ++ E RK+ SE K+L + + L Sbjct: 923 MRQDIRKSEKIRKELESQLEEVMAEASKERKLREHSE-VFCKQLENELEALKVKQGGRAA 981 Query: 275 KSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAE----------VV 324 + L + ++ L E ++ ++ E+ + + Sbjct: 982 GATLEHQQELSKMKAELEKKILFYEEELVRREASHVLEVKNVKKEVHDSESHQLALQKEI 1041 Query: 325 QDTARKMEVVAEEKMRMFKKARSV-LDACDRELEDKACAVTDLKMERQKKKPQIEELESI 383 K+E E+ ++A + +RE L E +K +++L + Sbjct: 1042 MILKDKLEKTKRERHSEMEEAVGSMKEKYERERSMLIEDNKKLTTENEKLCSFVDKLTAQ 1101 Query: 384 VRLKQAEADMFQLKAD-----EARREAEXXXXXXXXXXXXXXXXYTSKY----------- 427 R E K + EA+ SK Sbjct: 1102 NRQLDDELQDLAAKKESVAHWEAQIAEIIQWVSDEKDARGYLQALASKMTEELESLRSSS 1161 Query: 428 ---------------------LKLRLS---EAEER-RQYLFEELKAQENSQCDFDPMKMR 462 +L L +AE R +Q + EEL+ +++ F+ Sbjct: 1162 LGSRTLDPLWKVRRSQKLDMSARLELQSALDAEIRAKQLVQEELRKVKDANISFESKLKE 1221 Query: 463 MESEIRGLLKGME 475 E++ R LL+ ME Sbjct: 1222 SEAKNRELLEEME 1234 >gi|53801462|gb|AAU93933.1| plastid clpB [Helicosporidium sp. ex Simulium jonesii] Length = 195 Score = 94.5 bits (234), Expect = 5e-18 Identities = 30/171 (17%), Positives = 50/171 (29%), Gaps = 10/171 (5%) Query: 308 GFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK 367 ++ EI V+ + A+ R A D L D A LK Sbjct: 2 ISILRGLRERYEIHHGVRIADSALVEAAQLSDRYIADRFLPDKAID--LVD--EAAAKLK 57 Query: 368 MERQKKKPQIEELESIVRLKQAEADMFQLKA--DEARREAEXXXXXXXXXXXXXXXXYTS 425 ME K ++EL+ V + E Q A D T Sbjct: 58 MEITSKPAPLDELDRRVLQLEMERLSVQKAAPHDRGAAARLSALVASLEEAKRRQQELTV 117 Query: 426 KYLKLRLSE--AEERRQYLFEELKAQENSQCDFDP--MKMRMESEIRGLLK 472 ++ K R + ++ + + ++ D+D +R L K Sbjct: 118 EWEKEREELRGVQRLKEEMDRIQIEIQQAERDYDLNRAAELKYGTLRDLQK 168 >gi|56459783|ref|YP_155064.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones [Idiomarina loihiensis L2TR] Length = 756 Score = 94.1 bits (233), Expect = 7e-18 Identities = 26/153 (16%), Positives = 47/153 (30%), Gaps = 14/153 (9%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLKSKLIDPL 282 F K + E I +D + I + G L+ + K I Sbjct: 265 FEKRFKMLLKELQEKEHAILFIDEIHTIIGAGAASGGVLDASNLIKPLLSSGQLKCIGST 324 Query: 283 D---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ FQ+ D PS+E+ ++ E ++ T ++ Sbjct: 325 TYNEFKNVFEKDRALVRRFQKVDVVEPSVEDT--TKILMGLKERYESHHGIRYTQPAIKA 382 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDL 366 AE + + A D + D+A A L Sbjct: 383 AAELSAKYINERHLPDKAID--VMDEAGASQRL 413 >gi|74001175|ref|XP_857677.1| PREDICTED: similar to Intersectin 1 (SH3 domain-containing protein 1A) (SH3P17) isoform 5 [Canis familiaris] Length = 1149 Score = 94.1 bits (233), Expect = 7e-18 Identities = 50/249 (20%), Positives = 85/249 (34%), Gaps = 48/249 (19%) Query: 226 KDVFQHCAPNWDFEALIKELDFVRKIFRG--SEDARGKKLFWKADELIEK---LKSKLID 280 +++ + W+ + L+ K A+ K L ++ + L +K L+ KL D Sbjct: 439 RELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQD 498 Query: 281 PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN------EIAEVVQDTARKMEVV 334 C QE +S + S E Q + Q +++ V Sbjct: 499 --IRCRLTTQR-QEIESTNKSRELRIAEITHLQQQLQEAQQMLGRLIPEKQILNDQLKQV 555 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 + + R L R LE K ++ RQ+ + Q++E+E R K E D+F Sbjct: 556 QQNSL-----HRDSLLTLKRALEAK-------ELARQQLRDQLDEVEKETRSKLQEIDIF 603 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE----ELKAQ- 449 + E R + K + EAE +Q E EL+ Q Sbjct: 604 NNQLKELRE-----------------IHSKQQLQKQKSIEAERLKQKEQERKTIELEKQK 646 Query: 450 ENSQCDFDP 458 E +Q Sbjct: 647 EEAQRRAQE 655 Score = 40.6 bits (94), Expect = 0.089 Identities = 17/145 (11%), Positives = 51/145 (35%), Gaps = 19/145 (13%) Query: 278 LIDPLDACNFILMFFQECDSDSP-SLENGEGGFLIAPQDACNEIAEVV-QDTARKMEVVA 335 + L + Q+ + P + E+ + + + + + ++ E +A Sbjct: 325 VDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLA 384 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKME--------------RQKKKPQIEELE 381 + + ++ R + ++E + + L+ + ++++ ELE Sbjct: 385 QLE--RAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELE 442 Query: 382 SIVRLKQAEADMFQLKADEARREAE 406 R + E + Q ++ +E E Sbjct: 443 RQ-RQLEWERNRRQELLNQRNKEQE 466 Score = 40.6 bits (94), Expect = 0.100 Identities = 25/144 (17%), Positives = 45/144 (31%), Gaps = 21/144 (14%) Query: 263 LFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAE 322 L L++K + + E + ++ S F EI Sbjct: 561 HRDSLLTLKRALEAKELARQQ----LRDQLDEVEKETRSKLQEIDIFN-NQLKELREIHS 615 Query: 323 VVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELES 382 Q ++ + AE + ++ +++ ELE + ER K IE + Sbjct: 616 -KQQLQKQKSIEAERLKQKEQERKTI------ELEKQKEEAQRRAQERDK--QWIEHV-- 664 Query: 383 IVRLKQAEADMFQLKADE--ARRE 404 + E + DE RRE Sbjct: 665 ---QQDDEHQRPRKIHDEEKLRRE 685 >gi|48864977|ref|ZP_00318845.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Oenococcus oeni PSU-1] Length = 726 Score = 94.1 bits (233), Expect = 7e-18 Identities = 27/183 (14%), Positives = 59/183 (32%), Gaps = 12/183 (6%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + Q + +I +D + +I G + + + +LI Sbjct: 166 FEARMQQLMKEVESRDEVILFIDEIHEIMGAGNAEGGMDAGNILKPALARGEFQLIGATT 225 Query: 282 ------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ + FQE + PS E ++ E V+ +E Sbjct: 226 LKEYRNIEKDGAVSRRFQEVMVEEPS--RIEAVEILKGLRPKYEDFHHVKYPDDVLETAV 283 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ 395 + R + A D L D+A + +L +E + +++ + +KQ + Sbjct: 284 DLSDRYIPERFLPDKAID--LIDEAGSRKNLHLEFVSSEEIQQKINNAEAMKQQAIEKED 341 Query: 396 LKA 398 + Sbjct: 342 YEK 344 >gi|75229800|ref|ZP_00716327.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Escherichia coli B7A] Length = 941 Score = 94.1 bits (233), Expect = 8e-18 Identities = 27/190 (14%), Positives = 52/190 (27%), Gaps = 26/190 (13%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F K A +I +D + G + + + + Sbjct: 273 EFEKRFKGLMAEVISSPVPVILFIDEAHTLIGAGNQQGGLDISNLLKPALARGELKTIAA 332 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 S+ + + FQ P+ E ++ A E + V ++ Sbjct: 333 TTWSEYKKYFEKDAALSRRFQLVKVSEPN--AAEATIILRGLSAVYEQSHGVLIDDDALQ 390 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKAC-----AVTDLKMERQKKKPQIEELESIVRLK 387 A R R+L DKA A + + QI L ++ + Sbjct: 391 AAATLSERYL---------SGRQLPDKAIDVLDTACARVAINLSSPPKQISALTTLSHQQ 441 Query: 388 QAEADMFQLK 397 +AE + + Sbjct: 442 EAEIRQLERE 451 >gi|73964054|ref|XP_547990.2| PREDICTED: similar to CDC42-binding protein kinase beta isoform 1 [Canis familiaris] Length = 1676 Score = 94.1 bits (233), Expect = 8e-18 Identities = 43/280 (15%), Positives = 98/280 (35%), Gaps = 35/280 (12%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALI----------KELDFVRKIFRGSEDARGKKLF-- 264 + +++ Q A L +E + GS A G Sbjct: 426 KDEGVQRDLENSLQVEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSTRALGSSARDK 485 Query: 265 --WKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNE-IA 321 K +E IE+LK+K+ D Q D+ + E+ + + + + Sbjct: 486 EIKKLNEEIERLKNKIADSNRLER------QLEDTVTLRQEHEDSTHRLKGLEKQYRVVR 539 Query: 322 EVVQDTARKMEVVAE---EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIE 378 + + +++ +E + R K A +E + + +L+ ++QK Q+ Sbjct: 540 QEKEVFHKQLVEASERLKSQARELKDAHQQRKLALQEFSELNERMAELRSQKQKVSRQLR 599 Query: 379 ELESIVR--LKQAEADMFQLKADEA-RREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA 435 + E V +++ ++ +++ E R+E E + L+ Sbjct: 600 DKEEEVEVAMQKIDSMRQEIRKSEKFRKELE------ARLEDAVAEASRERKLREHSENF 653 Query: 436 EERRQYLFEELKAQENSQCDFDPMKMRME-SEIR-GLLKG 473 ++ + E LK ++ + ++ + E S+I+ L K Sbjct: 654 SKQVESELEALKMKQGGRGPGATLEHQQEISKIKSELEKK 693 Score = 80.7 bits (198), Expect = 9e-14 Identities = 40/282 (14%), Positives = 87/282 (30%), Gaps = 50/282 (17%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLF----WKADELIEKLK 275 ++ + + + + + ++E + GS A G K +E IE+LK Sbjct: 439 QVEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSTRALGSSARDKEIKKLNEEIERLK 498 Query: 276 SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI-AEVVQDTARKMEVV 334 +K+ D Q D+ + E+ + + + + + + +++ Sbjct: 499 NKIADSNRLER------QLEDTVTLRQEHEDSTHRLKGLEKQYRVVRQEKEVFHKQLVEA 552 Query: 335 AE------------------------EKMRMFKKARSVLDACDRELEDKACAVTDLKMER 370 +E E + RS R+L DK V + Sbjct: 553 SERLKSQARELKDAHQQRKLALQEFSELNERMAELRSQKQKVSRQLRDKEEEVEVAMQKI 612 Query: 371 QKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL 430 + +I + E + +A + EA RE + S+ L Sbjct: 613 DSMRQEIRKSEKFRKELEA---RLEDAVAEASRERKLREHSENFSKQV-----ESELEAL 664 Query: 431 RLSE------AEERRQYLFEELK-AQENSQCDFDPMKMRMES 465 ++ + A Q ++K E ++ +R E+ Sbjct: 665 KMKQGGRGPGATLEHQQEISKIKSELEKKVLFYEEELVRREA 706 Score = 48.7 bits (115), Expect = 4e-04 Identities = 50/337 (14%), Positives = 104/337 (30%), Gaps = 86/337 (25%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 K Q + E ++++D +R+ R SE R K+L + ++ + + + + Sbjct: 592 QKVSRQLRDKEEEVEVAMQKIDSMRQEIRKSEKFR-KELEARLEDAVAEASRERKLREHS 650 Query: 285 CNFILMFFQECDSD---------SPSLENGEGGFLIAPQDA-----------CNEIAEVV 324 NF E ++ +LE+ + I + E + V+ Sbjct: 651 ENFSKQVESELEALKMKQGGRGPGATLEHQQEISKIKSELEKKVLFYEEELVRREASHVL 710 Query: 325 QD-----------------------TARKMEVVAEEKMRMFKKA-RSVLDACDRELEDKA 360 + K+E E+ ++A +V + +RE Sbjct: 711 EVKNVKKEVHDSESHQLALQKEVLMLKDKLEKSKRERHTEMEEAVGTVREKYERERGMLL 770 Query: 361 CAVTDLKMERQKKKPQIEELESIVRLKQAEAD--MFQLK------------------ADE 400 L E ++ +++L + R + E + + + Sbjct: 771 EENKKLTAENERLCSFVDKLTAQNRQLEDELQDLAAKKESVAHWEAQIAEIIQWVSDEKD 830 Query: 401 AR-----------REAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ 449 AR E E + KL +S E + L E++A+ Sbjct: 831 ARGYLQALASKMTEELETLRSSSLGSRALDPLWKVRRSQKLDMSARLELQSALEAEIRAK 890 Query: 450 ENSQCDFDPMK----------MRMESEIRGLLKGMEM 476 + Q + +K E++ R LL+ ME+ Sbjct: 891 QLVQEELRKVKDTNLSFESKLKDSEAKNRELLEEMEI 927 Score = 41.7 bits (97), Expect = 0.047 Identities = 32/259 (12%), Positives = 84/259 (32%), Gaps = 48/259 (18%) Query: 225 VKDVFQHCAPNWDFEALIK-ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI---- 279 VK+V + + + ++ E+ ++ S+ R + +E + ++ K Sbjct: 712 VKNVKKEVHDSESHQLALQKEVLMLKDKLEKSKRER----HTEMEEAVGTVREKYERERG 767 Query: 280 ------DPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQD-------ACNEIAEVVQD 326 L A N L F + + E L A ++ EI + V D Sbjct: 768 MLLEENKKLTAENERLCSFVDKLTAQNRQLEDELQDLAAKKESVAHWEAQIAEIIQWVSD 827 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + +M ++ ++ + + + + ++ +++ + Sbjct: 828 EKDARGYLQALASKMTEELETLRSSSL-------GSRALDPLWKVRRSQKLDMSARLELQ 880 Query: 387 --KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE 444 +AE QL +E R+ + +L ++E + + L E Sbjct: 881 SALEAEIRAKQLVQEELRKVKDTNLSFES-----------------KLKDSEAKNRELLE 923 Query: 445 ELKAQENSQCDFDPMKMRM 463 E++ + + +++ Sbjct: 924 EMEILKKKMEENSEAGLKL 942 >gi|3859855|gb|AAC78611.1| intersectin long form [Homo sapiens] Length = 1721 Score = 94.1 bits (233), Expect = 8e-18 Identities = 49/259 (18%), Positives = 85/259 (32%), Gaps = 49/259 (18%) Query: 226 KDVFQHCAPNWDFEALIKELDFVRKIFRG--SEDARGKKLFWKADELIEK---LKSKLID 280 +++ + W+ + L+ K A+ K L ++ + L +K L+ KL D Sbjct: 439 RELERQRQLEWERNRRQELLNQRNKEQEDIVVLKAKKKTLEFELEALNDKKHQLEGKLQD 498 Query: 281 PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACN------EIAEVVQDTARKMEVV 334 C QE +S + S E Q + Q +++ V Sbjct: 499 --IRCRLTTQR-QEIESTNKSRELRIAEITHLQQQLQESQQMLGRLIPEKQILNDQLKQV 555 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 + + R L R LE K ++ RQ + Q++E+E R K E D+F Sbjct: 556 QQNSL-----HRDSLVTLKRALEAK-------ELARQHLRDQLDEVEKETRSKLQEIDIF 603 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQC 454 + E R + K + EAE +Q K QE Sbjct: 604 NNQLKELRE-----------------IHNKQQLQKQKSMEAERLKQ------KEQERKII 640 Query: 455 DFDPMKMRMESEIRGLLKG 473 + + K + + K Sbjct: 641 ELEKQKEEAQRRAQERDKQ 659 Score = 42.9 bits (100), Expect = 0.021 Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 14/130 (10%) Query: 273 KLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 LK L A + E + ++ S F EI Q ++ Sbjct: 567 TLKRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFN-NQLKELREI-HNKQQLQKQKS 624 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKK----KPQIEELESIVRLKQ 388 + AE + ++ + + ELE + ER K+ Q +E + +L Sbjct: 625 MEAERLKQKEQERKII------ELEKQKEEAQRRAQERDKQWLEHVQQEDEHQRPRKL-- 676 Query: 389 AEADMFQLKA 398 E + + + Sbjct: 677 HEEEKLKREE 686 Score = 40.6 bits (94), Expect = 0.10 Identities = 17/145 (11%), Positives = 51/145 (35%), Gaps = 19/145 (13%) Query: 278 LIDPLDACNFILMFFQECDSDSP-SLENGEGGFLIAPQDACNEIAEVV-QDTARKMEVVA 335 + L + Q+ + P + E+ + + + + + ++ E +A Sbjct: 325 VDQRLPEEPVLEDEQQQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLA 384 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKME--------------RQKKKPQIEELE 381 + + ++ R + ++E + + L+ + ++++ ELE Sbjct: 385 QLE--RAEQERKERERQEQERKRQLELEKQLEKQRELERQREEERRKEIERREAAKRELE 442 Query: 382 SIVRLKQAEADMFQLKADEARREAE 406 R + E + Q ++ +E E Sbjct: 443 RQ-RQLEWERNRRQELLNQRNKEQE 466 Score = 37.9 bits (87), Expect = 0.58 Identities = 35/298 (11%), Positives = 77/298 (25%), Gaps = 74/298 (24%) Query: 252 FRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLI 311 F + ++ + ++ + L + + + QE + + + Sbjct: 350 FEDKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLEL 409 Query: 312 APQDACN----------------------EIAEVVQDTARKMEVVAEEKMRMFKKARS-- 347 Q E + + E + K+ Sbjct: 410 EKQLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIV 469 Query: 348 VLDACDRELEDKACAVTDLKMERQKKKPQIE--------ELE-----SIVRLKQA----- 389 VL A + LE + A+ D K + + K I E+E +R+ + Sbjct: 470 VLKAKKKTLEFELEALNDKKHQLEGKLQDIRCRLTTQRQEIESTNKSRELRIAEITHLQQ 529 Query: 390 --------------EADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA 435 E + + + ++ + ++L+ +L E Sbjct: 530 QLQESQQMLGRLIPEKQILNDQLKQVQQNSLHRDSLVTLKRALEAKELARQHLRDQLDEV 589 Query: 436 EERRQYLFEE-------LKAQ-----------ENSQCDFDPMKMRMESEIRGLLKGME 475 E+ + +E LK + S + E +I L K E Sbjct: 590 EKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQKE 647 >gi|66870923|gb|EAL98287.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Arthrobacter sp. FB24] Length = 857 Score = 93.8 bits (232), Expect = 8e-18 Identities = 31/213 (14%), Positives = 63/213 (29%), Gaps = 46/213 (21%) Query: 266 KADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + ++ ++ FQ P++E+ +++ E V+ Sbjct: 352 ELHVVGATTFNEYR-KVEKDPAFERRFQPVQVGEPAVED--AVQILSGLRERYEEHHGVR 408 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEEL 380 T + E R DR L DKA A L ++ ++ Sbjct: 409 YTDEAVRAAVELSARYV---------TDRFLPDKAIDLMDQAGARLSLKLGSRQDAAALR 459 Query: 381 ESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ 440 E +V L++++ + EA S+ EA ++ Sbjct: 460 ERLVALEESKTAAIAAEDFEA----------------------ASRL----RDEANALKE 493 Query: 441 YLFEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 L +QE + E+EI ++ Sbjct: 494 KLDGGAASQEGP---GSESAVVGEAEIAEIISR 523 >gi|72139351|ref|XP_782203.1| PREDICTED: similar to myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila), partial [Strongylocentrotus purpuratus] Length = 2235 Score = 93.8 bits (232), Expect = 9e-18 Identities = 14/114 (12%), Positives = 30/114 (26%), Gaps = 23/114 (20%) Query: 124 KRCRNIACQNLLPADDCDCDICSNKKG----------------FCNLCMCVICSK-FDFA 166 K+ + C + C + F C +C K ++ Sbjct: 1318 KKRKIWVCSRCVRCKSCGATTPGSDPKAQWMHGFSHCQECGKLFEKGNYCPVCKKCYEDD 1377 Query: 167 SNTCRWIGCDVCSHWCHTDCA-IREGLIKMGHSAKGASGMTEMLFHCIACNHTS 219 + + C C+ W H C + + ++ + + C C Sbjct: 1378 DFESKMVQCADCNRWVHAKCENLSDDQYRILTEL-----PDSVPYRCPPCAKNK 1426 >gi|75189312|ref|ZP_00702579.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Escherichia coli E24377A] Length = 919 Score = 93.8 bits (232), Expect = 9e-18 Identities = 27/190 (14%), Positives = 52/190 (27%), Gaps = 26/190 (13%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F K A +I +D + G + + + + Sbjct: 273 EFEKRFKGLMAEVISSPVPVILFIDEAHTLIGAGNQQGGLDISNLLKPALARGELKTIAA 332 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 S+ + + FQ P+ E ++ A E + V ++ Sbjct: 333 TTWSEYKKYFEKDAALSRRFQLVKVSEPN--AAEATIILRGLSAVYEQSHGVLIDDDALQ 390 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKAC-----AVTDLKMERQKKKPQIEELESIVRLK 387 A R R+L DKA A + + QI L ++ + Sbjct: 391 AAATLSERYL---------SGRQLPDKAIDVLDTACARVAINLSSPPKQISALTTLSHQQ 441 Query: 388 QAEADMFQLK 397 +AE + + Sbjct: 442 EAEIRQLERE 451 >gi|54307876|ref|YP_128896.1| putative ATPase with chaperone activity [Photobacterium profundum SS9] Length = 914 Score = 93.8 bits (232), Expect = 1e-17 Identities = 23/168 (13%), Positives = 45/168 (26%), Gaps = 25/168 (14%) Query: 244 ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLD---------ACNFILMFFQE 294 +D + A + + + + I + FQ Sbjct: 344 FIDEAHAMVGSGGQAGQSDAANILKPALARGELRTIAATTWAEYKKYFEKDAALARRFQV 403 Query: 295 CDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDR 354 + PS + ++ E V T + ++ R R Sbjct: 404 VKVEEPSED--LAVVMLRGLLPVMEAHHQVTITDQALQAAVRLSHRYI---------SGR 452 Query: 355 ELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLK 397 +L DKA A + M + +IE L + +AE + + Sbjct: 453 QLPDKAVGLLDTACARVAMSQATAPAKIEALNKYQQQLEAEIIQLEKE 500 >gi|52858081|ref|ZP_00046852.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Lactobacillus gasseri] Length = 6623 Score = 93.4 bits (231), Expect = 1e-17 Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 17/191 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSE---DARGKKLFWKADELIEKLKSKLID 280 F + + + + +I +D + I + + + ++I Sbjct: 149 FEEKLKKIIDKAKGDKNVILFIDELHNIVGAGSTDSENNSGDAANILKPALASGEIRVIG 208 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P++E+ ++ E V+ ++ Sbjct: 209 ATTTSEYQQIEKDPALARRFQPVQVPEPTIED--AVQILKGLAPRYEKYHNVKYDPEALK 266 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + AE R A D L D+A A L M+ QK + I+ + K+AEA Sbjct: 267 LAAELSNRYINDRHLPDKAID--LMDEAGAKKSLGMD-QKDETSIKNKIHALEGKKAEA- 322 Query: 393 MFQLKADEARR 403 K DEA + Sbjct: 323 AKNEKYDEAAK 333 >gi|23025097|ref|ZP_00064272.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 826 Score = 93.4 bits (231), Expect = 1e-17 Identities = 34/267 (12%), Positives = 76/267 (28%), Gaps = 51/267 (19%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------ 276 F + + ++ +I +D + + + + + Sbjct: 262 EFEDRLKKIIEEIYNDGEVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQTLGAT 321 Query: 277 ---KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + +++ + F D P+ ++ ++ + E VQ +E Sbjct: 322 TFDEYQKYVESDAALERRFASVTVDEPTQDDAIA--ILKGIRSHFEKHHQVQIDDAAIEA 379 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQ 388 + R DR L DKA A ++++ K I + + Q Sbjct: 380 AVKLSARYI---------SDRFLPDKAIDLMDEAGAKVRIDATGKATPISKAKVRFAEVQ 430 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKA 448 AE + D K +LR E + +++ E K Sbjct: 431 AEKEAAITSLD------------------------FEKAAQLRTEEMKLKQKLAKSEAKD 466 Query: 449 QENSQCDFDP--MKMRMESEIRGLLKG 473 +N+Q + E +I ++ Sbjct: 467 TQNNQKENAERYSLHVTEEDIAEVISQ 493 >AAA_Q5BF22_219-415_PF00004.17 Length = 197 Score = 93.4 bits (231), Expect = 1e-17 Identities = 15/143 (10%), Positives = 38/143 (26%), Gaps = 14/143 (9%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFR-GSEDARGKKLFWKADELIEKLK----- 275 F + + E ++ +D + + G+ G ++ + + Sbjct: 54 EFEERLKGVLKEIEESKETIVLFVDEIHLLMGAGASGEGGMDAANLLKPMLARGQLHCIG 113 Query: 276 ----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV-VQDTARK 330 + ++ FQ+ P++ ++ E+ V+ Sbjct: 114 ATTLGEYRKYIEKDAAFERRFQQVLVKEPTVSETI--SILRGLKEKYEVHHGSVRILDAA 171 Query: 331 MEVVAEEKMRMFKKARSVLDACD 353 + A R R A D Sbjct: 172 IVTAATLAARYLTARRLPDSAVD 194 >AAA_Q7NKD6_211-405_PF00004.17 Length = 195 Score = 93.0 bits (230), Expect = 1e-17 Identities = 19/148 (12%), Positives = 40/148 (27%), Gaps = 21/148 (14%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + ++ +D + + G + + + + I Sbjct: 54 EFEERLKGVMQEVIASKGQIVLFIDELHTLVGAGASEGGMDAANLLKPALARGELQCIGA 113 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ PS++ E ++ E ++ T +E Sbjct: 114 TTLDEYRKHIERDAALERRFQPVTVGEPSVD--EAIAILQGLKVRYEEHHKLRYTDAALE 171 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKA 360 R DR L DKA Sbjct: 172 AAVRLSDRYI---------ADRFLPDKA 190 >gi|51597920|ref|YP_072111.1| Clp ATPase [Yersinia pseudotuberculosis IP 32953] Length = 867 Score = 93.0 bits (230), Expect = 2e-17 Identities = 33/251 (13%), Positives = 67/251 (26%), Gaps = 31/251 (12%) Query: 223 GFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F K A +I +D + G + + + + Sbjct: 273 EFEKRFKGIMAEIAQSTTPIILFIDEAHTLIGAGNQQGGLDISNLLKPALARGELKTIAA 332 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 S+ + + FQ PS E ++ E A V ++ Sbjct: 333 TTWSEYKKYFEKDAALSRRFQLVKVSEPS--AQEATIIMRGLRTVYEQAHGVLIDDEALQ 390 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKAC-----AVTDLKMERQKKKPQIEELESIVRLK 387 A R R+L DKA A + + Q+ L++ + + Sbjct: 391 AAAVLSDRYI---------SGRQLPDKAIDVLDTAAARVAINLTSAPRQVSALKNELYHQ 441 Query: 388 QAEADMFQLKADE-ARR--EAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYL 442 E +M + + R E + + K + + + R L Sbjct: 442 GMEIEMLEREQRLSLSRPDERLSVLQQQRIEIEQQLIALNTGWEKQQHLVQQIIALRAVL 501 Query: 443 FEELKAQENSQ 453 + ++ + Q Sbjct: 502 LAQEESATDEQ 512 >gi|65304433|emb|CAI76812.1| hypothetical protein, conserved [Theileria annulata] Length = 3595 Score = 93.0 bits (230), Expect = 2e-17 Identities = 24/123 (19%), Positives = 37/123 (30%), Gaps = 24/123 (19%) Query: 128 NIACQNLLPADDCDCDIC----SNKKG----FCNLC--------MCVICSKFDFASNTC- 170 + C C G FC C C IC K + Sbjct: 1167 SWKCDYCTQCISCGYRDHNTADYLNWGLFFFFCLKCWELLERSNYCGICYKVWTHFDGSS 1226 Query: 171 -RWIGCDVCSHWCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVF 229 +W+ C+ C W H +C LI S++ + + C C ++F K + Sbjct: 1227 QKWVQCEGCKLWIHIECDDLARLITDCPSSRNQN------YRCCICRSEDKMFRCTKALE 1280 Query: 230 QHC 232 Q Sbjct: 1281 QIF 1283 >gi|9655617|gb|AAF94303.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Vibrio cholerae O1 biovar eltor str. N16961] Length = 756 Score = 92.6 bits (229), Expect = 2e-17 Identities = 32/172 (18%), Positives = 55/172 (31%), Gaps = 15/172 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLKSKLIDPL 282 F K + I +D + I + G L+ K + I Sbjct: 266 FEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKLRCIGST 325 Query: 283 D---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + FQ+ D PSL++ ++ E V+ T + + Sbjct: 326 TYQEYSNIFEKERALSRRFQKIDIVEPSLDDT--TKILMGLKTKYEAHHDVRYTNKALRA 383 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIV 384 E + + A D + D+A A L R+KK + E+ES+V Sbjct: 384 AVELSAKYINERHLPDKAID--VIDEAGARARLMPASRRKKTVGVAEIESMV 433 >gi|22127238|ref|NP_670661.1| putative protease [Yersinia pestis KIM] Length = 882 Score = 92.6 bits (229), Expect = 2e-17 Identities = 20/181 (11%), Positives = 42/181 (23%), Gaps = 25/181 (13%) Query: 230 QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK---------SKLID 280 A ++ +D I A G + + + S+ Sbjct: 298 VIEAVQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQ 357 Query: 281 PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMR 340 + + FQ D P ++ ++ V + R Sbjct: 358 YFERDAALERRFQMVKVDEP--DDDTACLMLRGLKERYATHHGVHILDAAITAAVTLSRR 415 Query: 341 MFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ 395 R+L DKA A ++M + + + + E + Sbjct: 416 FL---------TGRQLPDKAVDLLDTAGARVRMSIDTLPTALMAINAELAALAMEQQAIE 466 Query: 396 L 396 Sbjct: 467 Q 467 >gi|68194693|gb|EAN09176.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Enterococcus faecium DO] Length = 830 Score = 92.6 bits (229), Expect = 2e-17 Identities = 30/243 (12%), Positives = 68/243 (27%), Gaps = 41/243 (16%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS------ 276 F + + ++ +I +D + + + + + Sbjct: 270 EFEDRMKKVIDEIYNDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQTIGAT 329 Query: 277 ---KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + ++ + + F D P+ E E ++ E V+ T + Sbjct: 330 TLDEYQKYIEKDSALERRFARIQVDEPTPE--EAEVILQGLRTRYEEHHGVEITDEAVRA 387 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADM 393 +R + A D L D++ A L Q + L +K E D Sbjct: 388 AVNLSVRYITSRQLPDKAID--LIDESAAKVRL--------DQTDHLTKSTVIK-LEIDE 436 Query: 394 FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ 453 + + A ++ + +LR E+ + +++ A E Q Sbjct: 437 LVQEKEAAIQKQDF-----------------ENAAQLRRQ--EKALRKKLQKVSAIEAKQ 477 Query: 454 CDF 456 Sbjct: 478 EQG 480 >AAA_Q8F906_213-406_PF00004.17 Length = 194 Score = 92.6 bits (229), Expect = 2e-17 Identities = 13/140 (9%), Positives = 39/140 (27%), Gaps = 11/140 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + + +I +D + + + + + Sbjct: 54 EFEERLKKIMKEITSSTNIIIFIDELHTLIGAGAAEGAVDAANILKPALARGELQCIGAT 113 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ ++ + + FQ PS+++ ++ E V+ + + +E Sbjct: 114 TSAEYRKYIEKDSALERRFQVVKVAEPSVDD--AIQILQGLKKAYETHHKVRYSDKALEQ 171 Query: 334 VAEEKMRMFKKARSVLDACD 353 + R A D Sbjct: 172 SVKLSHRYINDRYLPDKAID 191 >gi|66855575|ref|ZP_00399649.1| AAA ATPase, central region:Clp, N terminal [Anaeromyxobacter dehalogenans 2CP-C] Length = 760 Score = 92.6 bits (229), Expect = 2e-17 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 15/173 (8%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLKSKLIDP 281 F + + A I +D + I + + + I Sbjct: 263 EFEQRLKGVIAGVKKTPHAILFIDEIHTIVGAGATTGSSMDASNLLKPALASGELRCIGS 322 Query: 282 LD---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + FQ+ + PS+E+ ++ E V+ T R + Sbjct: 323 TTFHDYKQTFERDHALARRFQKIEVHEPSVEDTV--KILRGLKKVYEEHHGVEYTPRALR 380 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIV 384 AE + + A D + D+A A ++ E R+ ++ ++E +V Sbjct: 381 AAAELSAKHINDRQLPDKAID--VLDEAGARDRMRPEARRHRRITGRDVERVV 431 >gi|73964058|ref|XP_868606.1| PREDICTED: similar to Cdc42 binding protein kinase beta isoform 3 [Canis familiaris] Length = 1551 Score = 92.6 bits (229), Expect = 2e-17 Identities = 43/280 (15%), Positives = 98/280 (35%), Gaps = 35/280 (12%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALI----------KELDFVRKIFRGSEDARGKKLF-- 264 + +++ Q A L +E + GS A G Sbjct: 426 KDEGVQRDLENSLQVEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSTRALGSSARDK 485 Query: 265 --WKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNE-IA 321 K +E IE+LK+K+ D Q D+ + E+ + + + + Sbjct: 486 EIKKLNEEIERLKNKIADSNRLER------QLEDTVTLRQEHEDSTHRLKGLEKQYRVVR 539 Query: 322 EVVQDTARKMEVVAE---EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIE 378 + + +++ +E + R K A +E + + +L+ ++QK Q+ Sbjct: 540 QEKEVFHKQLVEASERLKSQARELKDAHQQRKLALQEFSELNERMAELRSQKQKVSRQLR 599 Query: 379 ELESIVR--LKQAEADMFQLKADEA-RREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA 435 + E V +++ ++ +++ E R+E E + L+ Sbjct: 600 DKEEEVEVAMQKIDSMRQEIRKSEKFRKELE------ARLEDAVAEASRERKLREHSENF 653 Query: 436 EERRQYLFEELKAQENSQCDFDPMKMRME-SEIR-GLLKG 473 ++ + E LK ++ + ++ + E S+I+ L K Sbjct: 654 SKQVESELEALKMKQGGRGPGATLEHQQEISKIKSELEKK 693 Score = 79.1 bits (194), Expect = 2e-13 Identities = 40/282 (14%), Positives = 87/282 (30%), Gaps = 50/282 (17%) Query: 220 ELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLF----WKADELIEKLK 275 ++ + + + + + ++E + GS A G K +E IE+LK Sbjct: 439 QVEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSTRALGSSARDKEIKKLNEEIERLK 498 Query: 276 SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI-AEVVQDTARKMEVV 334 +K+ D Q D+ + E+ + + + + + + +++ Sbjct: 499 NKIADSNRLER------QLEDTVTLRQEHEDSTHRLKGLEKQYRVVRQEKEVFHKQLVEA 552 Query: 335 AE------------------------EKMRMFKKARSVLDACDRELEDKACAVTDLKMER 370 +E E + RS R+L DK V + Sbjct: 553 SERLKSQARELKDAHQQRKLALQEFSELNERMAELRSQKQKVSRQLRDKEEEVEVAMQKI 612 Query: 371 QKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL 430 + +I + E + +A + EA RE + S+ L Sbjct: 613 DSMRQEIRKSEKFRKELEA---RLEDAVAEASRERKLREHSENFSKQV-----ESELEAL 664 Query: 431 RLSE------AEERRQYLFEELK-AQENSQCDFDPMKMRMES 465 ++ + A Q ++K E ++ +R E+ Sbjct: 665 KMKQGGRGPGATLEHQQEISKIKSELEKKVLFYEEELVRREA 706 Score = 47.5 bits (112), Expect = 7e-04 Identities = 50/337 (14%), Positives = 104/337 (30%), Gaps = 86/337 (25%) Query: 225 VKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDA 284 K Q + E ++++D +R+ R SE R K+L + ++ + + + + Sbjct: 592 QKVSRQLRDKEEEVEVAMQKIDSMRQEIRKSEKFR-KELEARLEDAVAEASRERKLREHS 650 Query: 285 CNFILMFFQECDSD---------SPSLENGEGGFLIAPQDA-----------CNEIAEVV 324 NF E ++ +LE+ + I + E + V+ Sbjct: 651 ENFSKQVESELEALKMKQGGRGPGATLEHQQEISKIKSELEKKVLFYEEELVRREASHVL 710 Query: 325 QD-----------------------TARKMEVVAEEKMRMFKKA-RSVLDACDRELEDKA 360 + K+E E+ ++A +V + +RE Sbjct: 711 EVKNVKKEVHDSESHQLALQKEVLMLKDKLEKSKRERHTEMEEAVGTVREKYERERGMLL 770 Query: 361 CAVTDLKMERQKKKPQIEELESIVRLKQAEAD--MFQLK------------------ADE 400 L E ++ +++L + R + E + + + Sbjct: 771 EENKKLTAENERLCSFVDKLTAQNRQLEDELQDLAAKKESVAHWEAQIAEIIQWVSDEKD 830 Query: 401 AR-----------REAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ 449 AR E E + KL +S E + L E++A+ Sbjct: 831 ARGYLQALASKMTEELETLRSSSLGSRALDPLWKVRRSQKLDMSARLELQSALEAEIRAK 890 Query: 450 ENSQCDFDPMK----------MRMESEIRGLLKGMEM 476 + Q + +K E++ R LL+ ME+ Sbjct: 891 QLVQEELRKVKDTNLSFESKLKDSEAKNRELLEEMEI 927 Score = 38.7 bits (89), Expect = 0.35 Identities = 32/255 (12%), Positives = 82/255 (32%), Gaps = 48/255 (18%) Query: 225 VKDVFQHCAPNWDFEALIK-ELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI---- 279 VK+V + + + ++ E+ ++ S+ R + +E + ++ K Sbjct: 712 VKNVKKEVHDSESHQLALQKEVLMLKDKLEKSKRER----HTEMEEAVGTVREKYERERG 767 Query: 280 ------DPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQD-------ACNEIAEVVQD 326 L A N L F + + E L A ++ EI + V D Sbjct: 768 MLLEENKKLTAENERLCSFVDKLTAQNRQLEDELQDLAAKKESVAHWEAQIAEIIQWVSD 827 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + +M ++ ++ + + + + ++ +++ + Sbjct: 828 EKDARGYLQALASKMTEELETLRSSSL-------GSRALDPLWKVRRSQKLDMSARLELQ 880 Query: 387 --KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE 444 +AE QL +E R+ + +L ++E + + L E Sbjct: 881 SALEAEIRAKQLVQEELRKVKDTNLSFES-----------------KLKDSEAKNRELLE 923 Query: 445 ELKAQENSQCDFDPM 459 E++ + + + Sbjct: 924 EMEILKKKMEENSEL 938 >gi|37680506|ref|NP_935115.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Vibrio vulnificus YJ016] Length = 781 Score = 92.2 bits (228), Expect = 2e-17 Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 15/172 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLKSKLIDPL 282 F K + I +D + I + G L+ K + I Sbjct: 291 FEKRFKTILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSGGKLRCIGST 350 Query: 283 D---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + FQ+ D PSL++ ++ + E V+ T + + Sbjct: 351 TYQEYSNIFEKERALSRRFQKIDVVEPSLDDT--TKILMGLKSKYEAHHDVRYTNKALRA 408 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDL-KMERQKKKPQIEELESIV 384 E + + A D + D+A A + L R+KK + ++E++V Sbjct: 409 AVELSAKYINERHLPDKAID--VIDEAGARSRLTPASRRKKTVGVADIEAMV 458 >gi|27361601|gb|AAO10508.1| ATP-dependent Clp protease [Vibrio vulnificus CMCP6] Length = 548 Score = 92.2 bits (228), Expect = 3e-17 Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 15/172 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLKSKLIDPL 282 F K + I +D + I + G L+ K + I Sbjct: 231 FEKRFKTILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSGGKLRCIGST 290 Query: 283 D---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + FQ+ D PSL++ ++ + E V+ T + + Sbjct: 291 TYQEYSNIFEKERALSRRFQKIDVVEPSLDDT--TKILMGLKSKYEAHHDVRYTNKALRA 348 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDL-KMERQKKKPQIEELESIV 384 E + + A D + D+A A + L R+KK + ++E++V Sbjct: 349 AVELSAKYINERHLPDKAID--VIDEAGARSRLTPASRRKKTVGVADIEAMV 398 >gi|67916618|ref|ZP_00510321.1| AAA ATPase, central region [Clostridium thermocellum ATCC 27405] Length = 803 Score = 92.2 bits (228), Expect = 3e-17 Identities = 35/232 (15%), Positives = 65/232 (28%), Gaps = 30/232 (12%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + +I +D + I E + K + ++I Sbjct: 239 FENRMKGIIEECKALGNIILVIDEIHNIMGAGEAEGAMNAANILKPALAKGEIQVIGATT 298 Query: 282 -------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVV 334 ++ + + FQ D PS+E ++ E V+ + + Sbjct: 299 LDEYRKHIEKDSALERRFQPVLVDEPSVEETI--EILRGIKDYYESYHRVKISDEVIRAA 356 Query: 335 AEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMF 394 R DR L DKA V D R ++++V L E + Sbjct: 357 VILSERYI---------TDRFLPDKAIDVLDEAGSRA-------NIKNVVLL---EYEAL 397 Query: 395 QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL 446 + + + + E E + KL E ++ EL Sbjct: 398 KEELKKVQEEKENAVSADSIEDYQKAADLKVRECKLLQQIKELEQKSKDMEL 449 >AAA_Q9KGG2_205-398_PF00004.17 Length = 194 Score = 92.2 bits (228), Expect = 3e-17 Identities = 17/140 (12%), Positives = 37/140 (26%), Gaps = 11/140 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + +I +D + + + + + + I Sbjct: 54 EFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGAT 113 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ + PSL+ E ++ E V T +E Sbjct: 114 TLDEYRKYIEKDAALERRFQPIQVNEPSLD--ESIQILKGLRDRYEAHHRVTITDEAIEE 171 Query: 334 VAEEKMRMFKKARSVLDACD 353 + R + A D Sbjct: 172 AVKLSDRYIQDRFLPDKAID 191 >gi|50233868|ref|NP_055771.3| hypothetical protein LOC22897 [Homo sapiens] Length = 1460 Score = 92.2 bits (228), Expect = 3e-17 Identities = 41/232 (17%), Positives = 83/232 (35%), Gaps = 31/232 (13%) Query: 243 KELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFIL------MFFQECD 296 + L ++R + S A ++ + + ++KL+ +L A L M Q + Sbjct: 668 QRLSWLRAQVQSSTQADEDQIRAEQEASLQKLREELESQQKAERASLEQKNRQMLEQLKE 727 Query: 297 SDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 S ++ + A + A ++ E ++ ++ E K+ + L+ L Sbjct: 728 EIEASEKSEQAALNAAKEKALQQLREQLEGERKEAVATLE------KEHSAELERLCSSL 781 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 E K V ++ ++ Q EE + L Q E + Q A E E Sbjct: 782 EAKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHEL--------- 832 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIR 468 S L+ + E E + +++K + Q + + E+E R Sbjct: 833 --------SSLLREKRQEVEGEHERRLDKMKEEH--QQVMAKAREQYEAEER 874 Score = 49.5 bits (117), Expect = 2e-04 Identities = 27/217 (12%), Positives = 76/217 (35%), Gaps = 32/217 (14%) Query: 251 IFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFL 310 + +++ + + ++K+K + + E + E Sbjct: 831 ELSSLLREKRQEVEGEHERRLDKMKEEHQQVMAKAR-------EQYEAEERKQRAELLGH 883 Query: 311 IAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER 370 + + + A R++E V +E+ + + R +R+L+D Sbjct: 884 LTGELERLQRAHE-----RELETVRQEQHKRLEDLRRRHREQERKLQDL----------- 927 Query: 371 QKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL 430 +++ LE+ + +A + +++ + ARRE + + Sbjct: 928 -----ELD-LETRAKDVKARLALLEVQEETARREKQQLLDVQRQVALKSEEATATH---Q 978 Query: 431 RLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEI 467 +L EA++ +L + + + K+++ES++ Sbjct: 979 QLEEAQKEHTHLLQSNQQLREILDELQARKLKLESQV 1015 >gi|48860810|ref|ZP_00314719.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Microbulbifer degradans 2-40] Length = 761 Score = 92.2 bits (228), Expect = 3e-17 Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 15/172 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK------- 275 F K A E I +D + I + G L+ Sbjct: 272 FEKRFKGLLADLKKREGAILFIDEIHTIIGAGAASGGVMDASNLLKPLLTSGDLRCIGST 331 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + D + FQ+ D + PS+++ ++ E ++ T ++ Sbjct: 332 TFQEYRGIFDKDRALSRRFQKIDVNEPSVDDT--YKILKGLKTRFEKHHNLKYTDTALKA 389 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKP-QIEELESIV 384 AE + A D + D+A A L+ E ++KK + ++E IV Sbjct: 390 AAELAGKYISDRFMPDKAID--VIDEAGAFQQLQPESKRKKQIGVRDIEEIV 439 >gi|54308345|ref|YP_129365.1| Putative ATP-dependent Clp protease, ATP-binding subunit ClpA [Photobacterium profundum SS9] Length = 756 Score = 92.2 bits (228), Expect = 3e-17 Identities = 28/172 (16%), Positives = 55/172 (31%), Gaps = 15/172 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLKSKLIDPL 282 F K + + +D + I + G L+ K + + Sbjct: 265 FEKRFKGILKQLEKEDHAVLFIDEIHTIIGAGAASGGQVDAANLIKPLLSNGKLRCMGST 324 Query: 283 D---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + FQ+ D PSL++ ++ E V+ T + + Sbjct: 325 TYQEYNNIFEKERALSRRFQKIDVIEPSLDDT--TKILMGLKPKYEAHHEVRFTNKAIRA 382 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIV 384 E + + A D + D+A A L R+KK + ++ES++ Sbjct: 383 AVELSAKYINERHLPDKAID--VIDEAGARCRLAPASRRKKTVNVSDIESMI 432 >gi|55588008|ref|XP_524843.1| PREDICTED: similar to Ski oncogene (C-ski) [Pan troglodytes] Length = 577 Score = 91.8 bits (227), Expect = 3e-17 Identities = 41/200 (20%), Positives = 70/200 (35%), Gaps = 61/200 (30%) Query: 263 LFWKADELIEKLKSKLIDPLDACNFI----LMFFQECDSDSPSLE-----NGEGGFL-IA 312 L + + L + L+ L F+ M ++ + S +L+ + E FL +A Sbjct: 290 LEAELEHLRQALEGGLDTKEAKEKFLHEVVKMRVKQEEKLSAALQAKRSLHQELEFLRVA 349 Query: 313 PQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE--------DKACAVT 364 ++ E E ++ +++E + E + K+A RELE DK C Sbjct: 350 KKEKLREATEAKRNLRKEIERLRAENEKKMKEANESRLRLKRELEQARQARVCDKGCEAG 409 Query: 365 DLKMERQ-----------------------------------------KKKPQIEELESI 383 L+ + QIE+L+ Sbjct: 410 RLRAKYSAQVEEGPARGTGEAQGAAQEPRVGEAASGRGRAASRRCCDHSAPFQIEDLQ-- 467 Query: 384 VRLKQAEADMFQLKADEARR 403 V+L+ AEAD QL+AD R Sbjct: 468 VKLQHAEADREQLRADLLRE 487 >AAA_Q5N2M7_217-410_PF00004.17 Length = 194 Score = 91.8 bits (227), Expect = 4e-17 Identities = 15/140 (10%), Positives = 37/140 (26%), Gaps = 11/140 (7%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP- 281 F + + + +I +D V + + + + + I Sbjct: 54 EFEERLKKIMDEIRSAGDVILVIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGAT 113 Query: 282 --------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ + FQ PS+++ ++ E ++ +E Sbjct: 114 TLDEYRKHIERDAALERRFQPVMVGEPSVDDTI--EILRGLRERYEQHHKLKIADEALEA 171 Query: 334 VAEEKMRMFKKARSVLDACD 353 A+ R A D Sbjct: 172 AAKLADRYISDRFLPDKAID 191 >AAA_Q5R0C4_211-405_PF00004.17 Length = 195 Score = 91.4 bits (226), Expect = 4e-17 Identities = 22/140 (15%), Positives = 41/140 (29%), Gaps = 12/140 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLKSKLIDPL 282 F K + E I +D + I + G L+ + K I Sbjct: 55 FEKRFKMLLKELQEKEHAILFIDEIHTIIGAGAASGGVLDASNLIKPLLSSGQLKCIGST 114 Query: 283 D---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ FQ+ D PS+E+ ++ E ++ T ++ Sbjct: 115 TYNEFKNVFEKDRALVRRFQKVDVVEPSVEDT--TKILMGLKERYESHHGIRYTQPAIKA 172 Query: 334 VAEEKMRMFKKARSVLDACD 353 AE + + A D Sbjct: 173 AAELSAKYINERHLPDKAID 192 >gi|62512777|ref|ZP_00384381.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Lactobacillus casei ATCC 334] Length = 724 Score = 91.4 bits (226), Expect = 4e-17 Identities = 35/243 (14%), Positives = 77/243 (31%), Gaps = 21/243 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP-- 281 F + + Q + +I +D + +I G + + + +L+ Sbjct: 180 FEQRMQQLIDELKKNKNIILFIDEIHEIVGAGNAEGGMDAGNVLKPALARGELQLVGATT 239 Query: 282 ------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 ++ + + Q + P++E ++ + V+ T +E A Sbjct: 240 SNEYRQIEKDSALARRLQPVLVEEPTVEETI--KILKGLQPRYQDFHHVKYTDAAIEAAA 297 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQ 395 R + A D L D++ + +L + + +++ + KQA Sbjct: 298 TLSNRYIQDRFLPDKAID--LLDESGSRKNLTIATVDPETIKTKIDDAEKQKQAALKQED 355 Query: 396 LKADEARR----EAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL-FEELKAQE 450 + R + E T K + + E + + ELKAQE Sbjct: 356 YEKAAFYRDQVTKLEDMAKKQSNLPENEIPTVTEKD----MEQIVEEKTNIPVGELKAQE 411 Query: 451 NSQ 453 +Q Sbjct: 412 QAQ 414 >gi|56784088|dbj|BAD81417.1| putative trithorax 3 [Oryza sativa (japonica cultivar-group)] Length = 991 Score = 91.4 bits (226), Expect = 4e-17 Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 17/97 (17%) Query: 130 ACQNLLPADDCDCDICSNKKGFCNLC--------MCVICSKFDFASNTCRWIGCDVCSHW 181 +C N +P + ++ C C C IC K ++ W+ CD C W Sbjct: 344 SCGNRVPPKIAKKKKQAGEQLLCRHCDKLLQSKQYCGICKKIWHHTDGGNWVCCDECQIW 403 Query: 182 CHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHT 218 H +C + I M + + C C Sbjct: 404 VHVECDLT--CINM-------EDLENADYFCPDCKSK 431 >gi|75241718|ref|ZP_00725555.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Escherichia coli F11] Length = 920 Score = 91.4 bits (226), Expect = 5e-17 Identities = 37/252 (14%), Positives = 66/252 (26%), Gaps = 34/252 (13%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------ 275 F K A +I +D + G + + + + Sbjct: 271 EFEKRFKGLMAEVIFSPVPVILFIDEAHTLIGAGNQQGGLDISNLLKPALARGELKTIAA 330 Query: 276 ---SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 S+ + + FQ P+ E ++ A E + V ++ Sbjct: 331 TTWSEYKKYFEKDAALSHRFQLVKVSEPN--AAEATIILRGLSAVYEQSHGVLIDDDALQ 388 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKAC-----AVTDLKMERQKKKPQIEELESIVRLK 387 A R R+L DKA A + + QI L ++ + Sbjct: 389 AAATLSERYL---------SGRQLPDKAIDVLDTACARVAINLSSPPKQISALTTLSHQQ 439 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-RLSEAEERRQYLFEEL 446 +AE + RE Y L L A +++Q L +E+ Sbjct: 440 EAEIRQLE-------RELRIGLRTDTSRMTEVLEQYDETLSALDELEVAWQQQQTLVQEI 492 Query: 447 KAQENSQCDFDP 458 A Sbjct: 493 IALRQQLLGVAE 504 >gi|56679738|gb|AAV96404.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Silicibacter pomeroyi DSS-3] Length = 775 Score = 91.4 bits (226), Expect = 5e-17 Identities = 27/172 (15%), Positives = 60/172 (34%), Gaps = 15/172 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK------- 275 F + + D + +D + + + G ++ K Sbjct: 275 FEERLKAVVNELEDHPDAVLFIDEIHTVIGAGATSGGAMDASNLLKPALQGGKLRTMGST 334 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + + + FQ+ D + P++E+ ++ E V+ TA ++ Sbjct: 335 TYKEFRQHFEKDRALSRRFQKIDVNEPTVED--SVKILKGLKPYFEEHHEVRYTADAIKS 392 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIV 384 E R + A D + D+A A L E +++K ++E+E++V Sbjct: 393 AVELSARYINDRKLPDKAID--VIDEAGAAQHLVAESKRRKTIGVKEIEAVV 442 >gi|46580013|ref|YP_010821.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] Length = 776 Score = 91.1 bits (225), Expect = 5e-17 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 15/172 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLKSKLIDPL 282 F + + I +D + I + G ++ + I Sbjct: 260 FEARLKAVISELSRQPDAILFIDEIHTIVGAGATSGGSMDASNILKPVLASGAIRCIGST 319 Query: 283 D---------ACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 + FQ+ D P+ E E ++ E V+ T + Sbjct: 320 THEEYRNHFEKDRALSRRFQKIDIGEPTQE--ECVEILKGLKEHYEEHHAVRYTLPALRA 377 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIV 384 E R A D + D+A A L+ + ++++E +V Sbjct: 378 AVELSARYVNDRLLPDKAID--VIDEAGAAMRLRAGFKPGASVSVQDVERVV 427 >gi|29029074|gb|AAO64916.1| At5g53430 [Arabidopsis thaliana] Length = 1043 Score = 91.1 bits (225), Expect = 6e-17 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 10/87 (11%) Query: 132 QNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREG 191 + L+P D C CS +C IC + ++ W+ CD C W H+ C Sbjct: 393 KALIPGDQLLCQPCSKLTK--PKHVCGICKRIWNHLDSQSWVRCDGCKVWIHSACD---- 446 Query: 192 LIKMGHSAKGASGMTEMLFHCIACNHT 218 S K + E ++C C Sbjct: 447 ----QISHKHFKDLGETDYYCPTCRTK 469 >gi|28377823|ref|NP_784715.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Lactobacillus plantarum WCFS1] Length = 837 Score = 91.1 bits (225), Expect = 6e-17 Identities = 23/203 (11%), Positives = 63/203 (31%), Gaps = 31/203 (15%) Query: 223 GFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK------- 275 F + + ++ +I +D + + + + + Sbjct: 265 EFEDRLKKVIDEIYNDGHVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQTIGAT 324 Query: 276 --SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEV 333 ++ +++ + F + P+ + E ++ E V T ++ Sbjct: 325 TLNEYQKYIESDAALERRFATVMVNEPTED--EAVEILDGLRPRYEEHHRVTITDEAVDQ 382 Query: 334 VAEEKMRMFKKARSVLDACDRELEDKA-----CAVTDLKMERQKKKPQIEELESIVRLKQ 388 + R DR L DKA A +++++ + ++ + + + + Sbjct: 383 AVKLSSRYI---------SDRFLPDKAIDLMDEAAAKVRIDQMDQPTKLSKNQDKLAQLR 433 Query: 389 ------AEADMFQLKADEARREA 405 EA F+ AD ++E Sbjct: 434 EDKETAIEAQDFEQAADIRKQEM 456 Searching..................................................done Results from round 5 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|8777406|dbj|BAA96996.1| unnamed protein product [Arabidopsis ... 448 e-124 gi|6466960|gb|AAF13095.1| unknown protein [Arabidopsis thaliana] 445 e-123 DUF1423_Q9LUB7_73-557_PF07227.1 435 e-120 gi|30385713|gb|AAP22955.1| Potyvirus VPg interacting protein [Pi... 427 e-118 DUF1423_Q9S736_74-548_PF07227.1 425 e-117 DUF1423_Q84N37_19-496_PF07227.1 421 e-116 gi|8778236|gb|AAF79245.1| F10B6.14 [Arabidopsis thaliana] 407 e-112 gi|30385711|gb|AAP22954.1| Potyvirus VPg interacting protein [Ni... 407 e-112 DUF1423_Q84N38_72-549_PF07227.1 400 e-110 gi|20148719|gb|AAM10250.1| unknown protein [Arabidopsis thaliana] 395 e-108 DUF1423_Q9LQV7_285-755_PF07227.1 376 e-103 gi|28973711|gb|AAO64172.1| unknown protein [Arabidopsis thaliana] 370 e-101 gi|7573333|emb|CAB87803.1| putative protein [Arabidopsis thaliana] 365 2e-99 DUF1423_Q84TI3_497-969_PF07227.1 348 2e-94 gi|68229264|ref|ZP_00568461.1| AAA ATPase, central region:Clp, N... 230 6e-59 gi|68172762|ref|ZP_00546043.1| AAA ATPase, central region:Clp, N... 229 1e-58 gi|4098131|gb|AAD00218.1| clpB [Mycobacterium bovis] 228 3e-58 gi|56543894|gb|AAV90048.1| ATP-dependent Clp protease [Zymomonas... 227 5e-58 gi|26248955|ref|NP_754995.1| ClpB protein [Escherichia coli CFT073] 227 7e-58 gi|41409951|ref|NP_962787.1| ClpB [Mycobacterium avium subsp. pa... 226 1e-57 gi|67153835|ref|ZP_00415580.1| AAA ATPase, central region:Clp, N... 226 1e-57 gi|68537287|ref|ZP_00577067.1| AAA ATPase, central region:Clp, N... 226 1e-57 gi|27376515|ref|NP_768044.1| ATP-dependent protease ATP-binding ... 225 3e-57 gi|48849033|ref|ZP_00303277.1| COG0542: ATPases with chaperone a... 224 5e-57 gi|54294637|ref|YP_127052.1| endopeptidase Clp ATP-binding chain... 223 8e-57 gi|71891969|ref|YP_277699.1| ATP-dependent protease [Candidatus ... 223 9e-57 gi|61679305|gb|AAX52932.1| ClpB [Bifidobacterium animalis subsp.... 223 1e-56 gi|39937493|ref|NP_949769.1| endopeptidase Clp: ATP-binding subu... 222 1e-56 gi|72160604|ref|YP_288261.1| ATPase [Thermobifida fusca YX] 222 1e-56 gi|71368674|ref|ZP_00659163.1| AAA ATPase, central region:Clp, N... 222 2e-56 gi|41326957|emb|CAF20801.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 222 2e-56 gi|17982078|gb|AAL51377.1| ATP-DEPENDENT CLP PROTEASE, ATP-BINDI... 222 2e-56 gi|75824073|ref|ZP_00753540.1| COG0542: ATPases with chaperone a... 222 2e-56 gi|61102045|ref|ZP_00377499.1| ATP-dependent Clp protease [Eryth... 221 3e-56 gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone a... 221 3e-56 gi|68538354|ref|ZP_00578132.1| AAA ATPase, central region:Clp, N... 221 4e-56 gi|49612793|emb|CAG76243.1| ClpB protein (heat shock protein f84... 221 4e-56 gi|56708764|ref|YP_170660.1| ClpB protein [Francisella tularensi... 220 5e-56 gi|42631176|ref|ZP_00156714.1| COG0542: ATPases with chaperone a... 220 6e-56 gi|76164358|gb|EAO58508.1| AAA ATPase, central region:Clp, N ter... 220 6e-56 gi|33151758|ref|NP_873111.1| ATP-dependant Clp protease chain B ... 220 6e-56 gi|13472967|ref|NP_104534.1| endopeptidase Clp ATP-binding chain... 220 6e-56 gi|50843466|ref|YP_056693.1| ATP-dependent protease (Clp chapero... 220 9e-56 gi|15159084|gb|AAK89256.1| AGR_L_1346p [Agrobacterium tumefacien... 219 1e-55 gi|71908340|ref|YP_285927.1| AAA ATPase, central region:Clp, N t... 219 2e-55 gi|75674787|ref|YP_317208.1| AAA ATPase [Nitrobacter winogradsky... 219 2e-55 gi|50084451|ref|YP_045961.1| ATP-dependent protease, Hsp 100, pa... 218 2e-55 gi|23335984|ref|ZP_00121214.1| COG0542: ATPases with chaperone a... 218 3e-55 gi|22124822|ref|NP_668245.1| heat shock protein [Yersinia pestis... 218 3e-55 gi|32452329|emb|CAD59396.1| putative ClpB1 protein [Propionibact... 218 3e-55 gi|58580960|ref|YP_199976.1| ATP-dependent Clp protease subunit ... 218 3e-55 gi|56479246|ref|YP_160835.1| ClpB protein [Azoarcus sp. EbN1] 218 3e-55 gi|3150046|gb|AAC16900.1| ClpB chaperone homolog [Lactococcus la... 217 5e-55 gi|46156241|ref|ZP_00133175.2| COG0542: ATPases with chaperone a... 217 5e-55 gi|27360063|gb|AAO09001.1| ClpB protein [Vibrio vulnificus CMCP6] 217 5e-55 gi|23494457|dbj|BAC19423.1| putative endopeptidase Clp ATP-bindi... 217 7e-55 gi|52307890|gb|AAU38390.1| ClpA protein [Mannheimia succinicipro... 217 7e-55 gi|56417033|ref|YP_154107.1| ATP-dependent clp protease ATP-bind... 217 7e-55 gi|58698222|ref|ZP_00373142.1| ATP-dependent Clp protease, ATP-b... 217 8e-55 gi|74316833|ref|YP_314573.1| ClpB protein [Thiobacillus denitrif... 216 9e-55 gi|54310128|ref|YP_131148.1| putative clpB, ATPases with chapero... 216 1e-54 gi|17864015|gb|AAL47016.1| ClpB ATP protease [Paracoccidioides b... 216 1e-54 gi|59711173|ref|YP_203949.1| ClpB protein [Vibrio fischeri ES114] 216 1e-54 gi|23474967|ref|ZP_00130258.1| COG0542: ATPases with chaperone a... 216 1e-54 gi|37525237|ref|NP_928581.1| heat shock protein F84.1 [Photorhab... 216 1e-54 gi|29653454|ref|NP_819146.1| clpB protein [Coxiella burnetii RSA... 215 2e-54 gi|48861360|ref|ZP_00315262.1| COG0542: ATPases with chaperone a... 215 2e-54 gi|68262865|emb|CAI36353.1| ATP-dependent Clp protease, ATP-bind... 215 2e-54 gi|68189537|gb|EAN04203.1| AAA ATPase, central region:Clp, N ter... 215 2e-54 gi|47573811|ref|ZP_00243848.1| COG0542: ATPases with chaperone a... 215 3e-54 gi|37523146|ref|NP_926523.1| endopeptidase Clp ATP-binding chain... 215 3e-54 gi|69300937|ref|ZP_00622398.1| AAA ATPase, central region:Clp, N... 215 3e-54 gi|6458777|gb|AAF10620.1| ATP-dependent Clp protease, ATP-bindin... 214 3e-54 gi|38234653|ref|NP_940420.1| Putative ATP-dependent protease reg... 214 4e-54 gi|69935649|ref|ZP_00630585.1| AAA ATPase, central region:Clp, N... 214 4e-54 gi|33602268|ref|NP_889828.1| ATP-dependent protease, ATPase subu... 214 4e-54 gi|17428350|emb|CAD15037.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 214 4e-54 gi|68213889|ref|ZP_00565718.1| AAA ATPase, central region:Clp, N... 214 5e-54 gi|16125131|ref|NP_419695.1| ATP-dependent Clp protease, ATP-bin... 214 5e-54 gi|75853631|ref|ZP_00761428.1| COG0542: ATPases with chaperone a... 214 5e-54 gi|72384775|gb|AAZ67679.1| chaperone putative [Haemophilus paras... 214 5e-54 gi|66043993|ref|YP_233834.1| AAA ATPase, central region:Clp, N t... 214 6e-54 gi|68209271|ref|ZP_00561312.1| AAA ATPase, central region:Clp, N... 214 6e-54 gi|53802726|ref|YP_115493.1| ATP-dependent Clp protease, ATP-bin... 214 7e-54 gi|28199560|ref|NP_779874.1| ATP-dependent Clp protease subunit ... 214 7e-54 gi|66870845|gb|EAL98209.1| AAA ATPase, central region:Clp, N ter... 213 7e-54 gi|12722113|gb|AAK03788.1| ClpB [Pasteurella multocida subsp. mu... 213 8e-54 gi|15023863|gb|AAK78935.1| ATPase with chaperone activity, two A... 213 8e-54 gi|26987361|ref|NP_742786.1| ATP-dependent Clp protease, ATP-bin... 213 9e-54 gi|58039904|ref|YP_191868.1| ATP-dependent Clp protease, ATP-bin... 213 1e-53 gi|68180177|ref|ZP_00553160.1| AAA ATPase, central region:Clp, N... 213 1e-53 gi|75429872|ref|ZP_00732490.1| ATPases with chaperone activity, ... 213 1e-53 gi|71281252|ref|YP_270571.1| ATP-dependent chaperone protein Clp... 212 1e-53 gi|42544975|gb|EAA67818.1| conserved hypothetical protein [Gibbe... 212 1e-53 gi|56679839|gb|AAV96505.1| ATP-dependent Clp protease, ATP-bindi... 212 2e-53 gi|56460289|ref|YP_155570.1| ATP-binding subunit of Clp protease... 212 2e-53 gi|18145090|dbj|BAB81134.1| clpB protein [Clostridium perfringen... 212 2e-53 gi|69954129|ref|ZP_00640937.1| AAA ATPase, central region:Clp, N... 212 2e-53 gi|67985293|gb|EAM73247.1| AAA ATPase, central region:Clp, N ter... 212 2e-53 gi|33519653|ref|NP_878485.1| ATP-dependent protease, Hsp 100, pa... 212 2e-53 gi|69945234|ref|ZP_00636365.1| AAA ATPase, central region:Clp, N... 211 3e-53 gi|28629052|gb|AAO49455.1| heat shock protein 78 [Leptosphaeria ... 211 3e-53 gi|46202513|ref|ZP_00053096.2| COG0542: ATPases with chaperone a... 211 3e-53 gi|73667261|ref|YP_303277.1| AAA ATPase, central region:Clp, N t... 211 4e-53 gi|67907151|ref|ZP_00505556.1| AAA ATPase, central region:Clp, N... 210 4e-53 gi|71547803|ref|ZP_00668357.1| AAA ATPase, central region:Clp, N... 210 5e-53 gi|32423740|gb|AAP81264.1| ClpB [Pseudomonas aeruginosa] 210 5e-53 gi|74019149|ref|ZP_00689767.1| AAA ATPase, central region:Clp, N... 210 6e-53 gi|66802530|ref|XP_635137.1| hypothetical protein DDB0183816 [Di... 210 7e-53 gi|42524440|ref|NP_969820.1| ATPase with chaperone activity, two... 210 7e-53 gi|68171311|ref|ZP_00544710.1| AAA ATPase, central region:Clp, N... 210 7e-53 gi|67676700|ref|ZP_00473446.1| AAA ATPase, central region:Clp, N... 210 8e-53 gi|58584441|ref|YP_198014.1| ATP-binding subunit of Clp protease... 210 9e-53 gi|8575704|gb|AAF78058.1| ClpB protease [secondary endosymbiont ... 209 1e-52 gi|34497399|ref|NP_901614.1| ATP-dependent Clp protease subunit;... 209 1e-52 gi|38492939|pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb 209 1e-52 gi|11561806|gb|AAC83688.2| 101 kDa heat shock protein; HSP101 [N... 209 1e-52 gi|56419334|ref|YP_146652.1| ATP-dependent Clp protease ATP-bind... 209 1e-52 gi|9651530|gb|AAF91178.1| ClpB [Phaseolus lunatus] 209 1e-52 gi|24427167|emb|CAD55328.1| ATP-dependent protease ATP-binding s... 209 1e-52 gi|537446|gb|AAA67927.1| AtHSP101 209 1e-52 gi|68002317|ref|ZP_00534948.1| AAA ATPase, central region:Clp, N... 209 2e-52 gi|530207|gb|AAA66338.1| heat shock protein 208 2e-52 gi|52209532|emb|CAH35485.1| ClpB heat-shock protein [Burkholderi... 208 2e-52 gi|21204024|dbj|BAB94722.1| clpB [Staphylococcus aureus subsp. a... 208 2e-52 gi|46580283|ref|YP_011091.1| ATP-dependent Clp protease, ATP-bin... 208 2e-52 gi|28378553|ref|NP_785445.1| ATP-dependent Clp protease, ATP-bin... 208 3e-52 gi|70732609|ref|YP_262372.1| ClpB protein PA4542 [Pseudomonas fl... 208 3e-52 gi|32422771|ref|XP_331829.1| hypothetical protein [Neurospora cr... 208 3e-52 gi|48783814|ref|ZP_00280195.1| COG0542: ATPases with chaperone a... 208 3e-52 gi|66782797|gb|EAL83760.1| AAA ATPase, central region:Clp, N ter... 207 4e-52 gi|24375079|ref|NP_719122.1| clpB protein [Shewanella oneidensis... 207 4e-52 gi|15075632|emb|CAC47187.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 207 4e-52 gi|3360502|gb|AAC62621.1| heat shock protein [Plectonema boryanum] 207 4e-52 gi|51473305|ref|YP_067062.1| ATP-binding ClpB chaperone [Rickett... 207 4e-52 gi|54035876|sp|Q8YM56|CLPB2_ANASP Chaperone clpB 2 207 5e-52 gi|42453220|ref|ZP_00153127.1| COG0542: ATPases with chaperone a... 207 5e-52 gi|22295113|dbj|BAC08941.1| ClpB protein [Thermosynechococcus el... 207 5e-52 gi|57866505|ref|YP_188155.1| ATP-dependent Clp protease, ATP-bin... 207 6e-52 gi|16331048|ref|NP_441776.1| ClpB protein [Synechocystis sp. PCC... 207 6e-52 gi|73541668|ref|YP_296188.1| AAA ATPase, central region:Clp, N t... 207 6e-52 gi|69927725|ref|ZP_00624886.1| AAA ATPase, central region:Clp, N... 207 6e-52 gi|54035919|sp|Q9Z6E4|CLPB_STRAL Chaperone clpB 207 7e-52 gi|68195152|gb|EAN09610.1| AAA ATPase, central region:Clp, N ter... 207 8e-52 gi|50916753|ref|XP_468773.1| putative heat shock protein [Oryza ... 206 1e-51 gi|71675495|ref|ZP_00673240.1| AAA ATPase, central region:Clp, N... 206 1e-51 gi|68054833|ref|ZP_00538983.1| AAA ATPase, central region:Clp, N... 206 1e-51 gi|74022612|ref|ZP_00693193.1| AAA ATPase, central region:Clp, N... 206 1e-51 gi|68528191|gb|EAN51157.1| AAA ATPase, central region:Clp, N ter... 206 1e-51 gi|58417961|emb|CAI27165.1| ClpB protein [Ehrlichia ruminantium ... 205 2e-51 gi|66805423|ref|XP_636444.1| hypothetical protein DDB0188234 [Di... 205 2e-51 gi|48763004|ref|ZP_00267561.1| COG0542: ATPases with chaperone a... 205 2e-51 gi|67517989|ref|XP_658767.1| hypothetical protein AN1163.2 [Aspe... 205 3e-51 gi|68989120|dbj|BAE06227.1| heat shock protein [Lycopersicon esc... 204 3e-51 gi|28210275|ref|NP_781219.1| clpB protein [Clostridium tetani E88] 204 3e-51 gi|399265|sp|P17422|CLPB_BACNO Chaperone clpB 204 4e-51 gi|39944910|ref|XP_361992.1| hypothetical protein MG04437.4 [Mag... 204 4e-51 gi|31872394|gb|AAP59445.1| ClpB-like protein [Meiothermus ruber] 204 5e-51 gi|39982528|gb|AAR33988.1| ClpB protein [Geobacter sulfurreducen... 203 6e-51 gi|71543204|ref|ZP_00664602.1| AAA ATPase, central region:Clp, N... 203 7e-51 gi|885934|gb|AAB09631.1| ClpB 203 8e-51 gi|15828345|ref|NP_302608.1| heat shock protein [Mycobacterium l... 203 1e-50 gi|49240131|emb|CAF26578.1| ATP-dependent clp protease, ATP-bind... 203 1e-50 gi|66850118|gb|EAL90445.1| ATP-dependent Clp protease, putative ... 202 1e-50 gi|52698325|ref|ZP_00339733.1| COG0542: ATPases with chaperone a... 202 1e-50 gi|49476075|ref|YP_034116.1| ATP-dependent clp protease, ATP-bin... 202 1e-50 gi|23123825|ref|ZP_00105864.1| COG0542: ATPases with chaperone a... 202 2e-50 gi|50876799|emb|CAG36639.1| probable heat shock protein ClpB [De... 202 2e-50 gi|62426046|ref|ZP_00381176.1| COG0542: ATPases with chaperone a... 202 3e-50 gi|9755800|emb|CAC01744.1| clpB heat shock protein-like [Arabido... 201 3e-50 gi|33639012|emb|CAE08018.1| endopeptidase Clp ATP-binding chain ... 201 3e-50 gi|22957954|ref|ZP_00005638.1| COG0542: ATPases with chaperone a... 201 4e-50 gi|33634638|emb|CAE20624.1| ATP-dependent Clp protease, Hsp 100,... 201 4e-50 gi|46908440|ref|YP_014829.1| clpB protein [Listeria monocytogene... 201 4e-50 gi|71550106|ref|ZP_00670254.1| AAA ATPase, central region:Clp, N... 200 5e-50 gi|66854676|ref|ZP_00398756.1| AAA ATPase, central region:Clp, N... 200 6e-50 gi|24214579|ref|NP_712060.1| ATPase with chaperone activity, two... 200 6e-50 gi|70726976|ref|YP_253890.1| hypothetical protein SH1975 [Staphy... 200 6e-50 gi|71837201|ref|ZP_00676967.1| AAA ATPase, central region:Clp, N... 200 7e-50 gi|67934490|ref|ZP_00527533.1| AAA ATPase, central region:Clp, N... 200 7e-50 gi|23128455|ref|ZP_00110302.1| COG0542: ATPases with chaperone a... 200 7e-50 gi|19713201|gb|AAL94040.1| ClpB protein [Fusobacterium nucleatum... 200 9e-50 gi|11561808|gb|AAC83689.2| 101 kDa heat shock protein; HSP101 [T... 199 1e-49 gi|73663109|ref|YP_301890.1| putative ATPase subunit of an ATP-d... 198 2e-49 gi|29608171|dbj|BAC72226.1| putative ATP-dependent Clp protease ... 198 3e-49 gi|48870729|ref|ZP_00323448.1| COG0542: ATPases with chaperone a... 198 3e-49 gi|54027376|ref|YP_121618.1| putative Clp protease ATP-binding s... 198 3e-49 gi|67923982|ref|ZP_00517435.1| AAA ATPase, central region:Clp, N... 197 4e-49 gi|17979454|gb|AAL50064.1| At2g25140/F13D4.100 [Arabidopsis thal... 197 6e-49 gi|7380324|emb|CAB84911.1| ClpB protein [Neisseria meningitidis ... 197 6e-49 gi|68178655|ref|ZP_00551766.1| IMP dehydrogenase/GMP reductase:A... 197 7e-49 gi|6013196|gb|AAF01280.1| heat shock protein 101 [Triticum aesti... 197 7e-49 gi|22535406|emb|CAC87117.1| heat shock protein 101 [Oryza sativa... 196 1e-48 gi|6320464|ref|NP_010544.1| Oligomeric mitochondrial matrix chap... 196 1e-48 gi|50955821|ref|YP_063109.1| ATP-dependent Clp protease, ATP-bin... 196 1e-48 gi|67931988|ref|ZP_00525140.1| AAA ATPase, central region:Clp, N... 196 1e-48 gi|42527829|ref|NP_972927.1| ATP-dependent Clp protease, ATP-bin... 195 2e-48 gi|29376856|ref|NP_816010.1| ATP-dependent Clp protease, ATP-bin... 195 2e-48 gi|29610907|dbj|BAC74952.1| putative ATP-dependent Clp protease ... 195 2e-48 gi|44983280|gb|AAS52462.1| AEL223Cp [Ashbya gossypii ATCC 10895] 195 2e-48 gi|71363823|ref|ZP_00654425.1| AAA ATPase, central region:Clp, N... 195 3e-48 gi|3560150|emb|CAA20737.1| SPBC4F6.17c [Schizosaccharomyces pombe] 195 3e-48 gi|65303851|emb|CAI76228.1| ClpB protein, putative [Theileria an... 194 4e-48 gi|68246595|gb|EAN28691.1| AAA ATPase, central region:Clp, N ter... 194 5e-48 gi|33240532|ref|NP_875474.1| ATPase with chaperone activity ATP-... 193 8e-48 gi|70800165|gb|AAZ10006.1| serine peptidase, putative [Leishmani... 193 8e-48 gi|33861137|ref|NP_892698.1| ATP-dependent Clp protease, Hsp 100... 192 2e-47 gi|70799667|gb|AAZ09583.1| Serine peptidase, putative [Leishmani... 192 2e-47 gi|33945097|ref|XP_340696.1| heat shock protein 100 [Trypanosoma... 191 3e-47 gi|53712497|ref|YP_098489.1| endopeptidase Clp ATP-binding chain... 190 8e-47 gi|33944507|ref|XP_340401.1| mitochondrial heat shock protein 78... 190 9e-47 gi|50309407|ref|XP_454711.1| unnamed protein product [Kluyveromy... 190 9e-47 gi|71661302|ref|XP_817674.1| ATP-dependent Clp protease subunit,... 189 1e-46 gi|67940377|ref|ZP_00532807.1| AAA ATPase, central region:Clp, N... 188 2e-46 gi|67921632|ref|ZP_00515150.1| AAA ATPase, central region:Clp, N... 187 4e-46 gi|68209799|ref|ZP_00561666.1| AAA ATPase, central region:Clp, N... 187 4e-46 gi|17131414|dbj|BAB74021.1| endopeptidase Clp ATP-binding chain ... 187 5e-46 gi|4481954|emb|CAB38512.1| SPBC16D10.08c [Schizosaccharomyces po... 187 5e-46 gi|50294636|ref|XP_449729.1| unnamed protein product [Candida gl... 187 5e-46 gi|6967978|emb|CAB75146.1| ATP-dependent CLP protease ATP-bindin... 187 8e-46 gi|29341916|gb|AAO79702.1| endopeptidase Clp ATP-binding chain B... 187 8e-46 gi|15639065|ref|NP_218511.1| ATP-dependent Clp protease subunit ... 186 1e-45 gi|72381856|ref|YP_291211.1| ATPase [Prochlorococcus marinus str... 186 1e-45 gi|16331154|ref|NP_441882.1| ClpB protein [Synechocystis sp. PCC... 186 1e-45 gi|54035913|sp|Q9PKS5|CLPB_CHLMU Chaperone clpB 185 2e-45 gi|57898943|emb|CAI44947.1| putative HSP100 protein [Phycomyces ... 185 2e-45 gi|48855282|ref|ZP_00309441.1| COG0542: ATPases with chaperone a... 185 3e-45 gi|47568371|ref|ZP_00239072.1| ATP-dependent Clp protease, ATP-b... 185 3e-45 gi|22296180|dbj|BAC10004.1| endopeptidase Clp ATP-binding chain ... 185 3e-45 gi|7435720|pir||D71409 probable endopeptidase Clp ATP-binding ch... 183 1e-44 gi|49655876|emb|CAG88481.1| unnamed protein product [Debaryomyce... 183 1e-44 gi|23128140|ref|ZP_00109994.1| COG0542: ATPases with chaperone a... 182 2e-44 gi|34540850|ref|NP_905329.1| clpB protein [Porphyromonas gingiva... 182 2e-44 gi|15425870|gb|AAK97626.1| heat shock protein 78 [Candida albicans] 181 3e-44 gi|68350763|gb|EAN31526.1| ClpB protein, putative [Theileria parva] 180 5e-44 gi|29570852|gb|AAO73810.2| heat shock protein CLPA [Paracoccidio... 180 6e-44 gi|57505126|ref|ZP_00371071.1| ATP-dependent Clp protease, ATP-b... 180 1e-43 gi|57505852|ref|ZP_00371777.1| ATP-dependent Clp protease, ATP-b... 180 1e-43 gi|32261656|gb|AAP76706.1| ATP-dependent CLP protease ClpA [Heli... 178 2e-43 gi|57241181|ref|ZP_00369128.1| clpB protein VC0711 [Campylobacte... 178 4e-43 gi|68175940|ref|ZP_00549169.1| AAA ATPase, central region:Clp, N... 177 4e-43 gi|32446255|emb|CAD76084.1| ClpB protein [Rhodopirellula baltica... 177 7e-43 gi|28493713|ref|NP_787874.1| ATP-dependent protase ATP-binding s... 177 7e-43 gi|34482740|emb|CAE09740.1| CLP PROTEASE ATP-BINDING SUBUNIT [Wo... 177 9e-43 gi|23494372|dbj|BAC19339.1| putative endopeptidase Clp ATP-bindi... 176 1e-42 gi|57222826|gb|AAW40870.1| heat shock protein, putative [Cryptoc... 176 1e-42 gi|399212|sp|P31541|CLAA_LYCES ATP-dependent Clp protease ATP-bi... 175 2e-42 gi|7189542|gb|AAF38444.1| ATP-dependent Clp protease, subunit B ... 175 2e-42 gi|29840383|ref|NP_829489.1| ATP-dependent Clp protease, subunit... 175 2e-42 gi|50555844|ref|XP_505330.1| hypothetical protein [Yarrowia lipo... 175 3e-42 gi|56750897|ref|YP_171598.1| ATP-dependent Clp protease ATP-bind... 174 4e-42 gi|68479564|ref|XP_716146.1| hypothetical protein CaO19_13747 [C... 173 6e-42 gi|66850531|gb|EAL90858.1| ATP-dependent Clp protease, putative ... 173 9e-42 gi|46400003|emb|CAF23452.1| probable endopeptidase Clp ATP-bindi... 173 1e-41 gi|71401304|ref|XP_803323.1| ATP-dependent Clp protease subunit,... 173 1e-41 gi|7576225|emb|CAB87915.1| AtClpC [Arabidopsis thaliana] 172 1e-41 gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana] 172 2e-41 gi|50365236|ref|YP_053661.1| ATPase subunit of ATP-dependant pro... 171 4e-41 gi|39977113|ref|XP_369944.1| hypothetical protein MG06459.4 [Mag... 171 4e-41 gi|67517159|ref|XP_658462.1| hypothetical protein AN0858.2 [Aspe... 171 4e-41 gi|50923949|ref|XP_472335.1| OSJNBa0039C07.4 [Oryza sativa (japo... 171 4e-41 gi|67919330|ref|ZP_00512911.1| AAA ATPase, central region:Clp, N... 170 6e-41 gi|23480353|gb|EAA16934.1| ClpB protein [Plasmodium yoelii yoelii] 170 6e-41 gi|68262963|emb|CAI36451.1| ATP-dependent Clp protease [Coryneba... 170 6e-41 gi|461753|sp|P35100|CLPA_PEA ATP-dependent Clp protease ATP-bind... 169 1e-40 gi|42561142|ref|NP_975593.1| ATP dependant protease ClpB [Mycopl... 169 1e-40 gi|27467205|ref|NP_763842.1| endopeptidase [Staphylococcus epide... 169 1e-40 gi|4105131|gb|AAD02267.1| ClpC protease [Spinacia oleracea] 169 1e-40 gi|67935560|ref|ZP_00528580.1| AAA ATPase, central region:Clp, N... 169 2e-40 gi|71149796|ref|ZP_00648718.1| AAA ATPase, central region:Clp, N... 168 2e-40 gi|54022379|ref|YP_116621.1| putative Clp protease [Nocardia far... 168 2e-40 gi|67465519|ref|XP_648944.1| AAA family ATPase, putative [Entamo... 168 2e-40 gi|21203645|dbj|BAB94345.1| endopeptidase [Staphylococcus aureus... 168 2e-40 gi|41326857|emb|CAF20701.1| PROBABLE ATP-DEPENDENT PROTEASE (HEA... 168 3e-40 gi|21675087|ref|NP_663152.1| ATP-dependent Clp protease, ATP-bin... 168 3e-40 gi|71482382|ref|ZP_00662075.1| AAA ATPase, central region:Clp, N... 168 4e-40 gi|67463114|ref|XP_648214.1| HSP101-related protein [Entamoeba h... 168 4e-40 gi|57228420|gb|AAW44877.1| chaperone, putative [Cryptococcus neo... 167 5e-40 gi|62998570|gb|AAF01451.2| HSP100 [Pleurotus sajor-caju] 167 7e-40 gi|15827032|ref|NP_301295.1| putative ATP-dependent Clp protease... 167 8e-40 gi|50955646|ref|YP_062934.1| ATP-dependent Clp protease, ATP-bin... 167 8e-40 gi|68553506|ref|ZP_00592879.1| AAA ATPase, central region:Clp, N... 166 9e-40 gi|71024695|ref|XP_762577.1| hypothetical protein UM06430.1 [Ust... 166 1e-39 gi|20808693|ref|NP_623864.1| ATPases with chaperone activity, AT... 166 1e-39 gi|38234547|ref|NP_940314.1| ATP-dependent Clp protease ATP-bind... 164 4e-39 gi|70727483|ref|YP_254399.1| endopeptidas Clp ATP-binding chain ... 164 4e-39 gi|73663540|ref|YP_302321.1| putative stress response-related Cl... 164 4e-39 gi|71367651|ref|ZP_00658171.1| UvrB/UvrC protein:AAA ATPase, cen... 164 4e-39 gi|67914654|gb|EAM63991.1| AAA ATPase, central region:Clp, N ter... 164 5e-39 gi|72163275|ref|YP_290932.1| ATPase [Thermobifida fusca YX] 164 5e-39 gi|23612849|ref|NP_704388.1| hypothetical protein [Plasmodium fa... 164 6e-39 gi|23336357|ref|ZP_00121578.1| COG0542: ATPases with chaperone a... 163 8e-39 gi|71071100|ref|XP_768118.1| heat shock protein [Giardia lamblia... 163 8e-39 gi|44985843|gb|AAS54454.1| AGL036Cp [Ashbya gossypii ATCC 10895] 163 9e-39 gi|50841767|ref|YP_054994.1| putative Clp-family ATP-binding pro... 163 9e-39 gi|75760630|ref|ZP_00740659.1| Negative regulator of genetic com... 163 1e-38 gi|37521633|ref|NP_925010.1| endopeptidase Clp ATP-binding chain... 163 1e-38 gi|68268640|ref|ZP_00574909.1| UvrB/UvrC protein:AAA ATPase, cen... 162 1e-38 gi|17132093|dbj|BAB74698.1| endopeptidase Clp ATP-binding chain ... 162 2e-38 gi|16331384|ref|NP_442112.1| ATP-dependent Clp protease regulato... 162 2e-38 gi|12045215|ref|NP_073026.1| ATP-dependent Clp protease, ATPase ... 162 2e-38 gi|44889002|sp|P31540|HSP98_NEUCR Heat shock protein HSP98 162 2e-38 gi|49655166|emb|CAG87721.1| unnamed protein product [Debaryomyce... 162 2e-38 gi|399213|sp|P31542|CLAB_LYCES ATP-dependent Clp protease ATP-bi... 162 2e-38 gi|66870181|gb|EAL97546.1| UvrB/UvrC protein:AAA ATPase, central... 162 2e-38 gi|62734176|gb|AAX96285.1| Clp amino terminal domain, putative [... 160 5e-38 gi|13357952|ref|NP_078226.1| ATP-dependent serine proteinase - h... 160 5e-38 gi|2493732|sp|P71404|CLPB_HELPY Chaperone clpB 160 6e-38 gi|62734225|gb|AAX96334.1| Clp amino terminal domain, putative [... 160 7e-38 gi|33632641|emb|CAE07453.1| endopeptidase Clp ATP-binding chain ... 160 8e-38 gi|50311735|ref|XP_455896.1| unnamed protein product [Kluyveromy... 160 8e-38 gi|68551190|ref|ZP_00590613.1| AAA ATPase, central region:Clp, N... 160 8e-38 gi|1673983|gb|AAB95959.1| ATP-dependent protease binding subunit... 160 9e-38 gi|28572245|ref|NP_789025.1| putative Clp-family ATP-binding pro... 160 9e-38 gi|51894268|ref|YP_076959.1| class III stress response-related A... 160 1e-37 gi|22294028|dbj|BAC07860.1| ATP-dependent Clp protease regulator... 159 1e-37 gi|52001792|gb|AAU21734.1| class III stress response-related ATP... 159 1e-37 gi|71675077|ref|ZP_00672823.1| UvrB/UvrC protein:AAA ATPase, cen... 159 2e-37 gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase s... 159 2e-37 gi|23097548|ref|NP_691014.1| ATP-dependent Clp protease [Oceanob... 158 2e-37 gi|67677719|ref|ZP_00474444.1| AAA ATPase, central region:Clp, N... 158 2e-37 gi|67985140|gb|EAM73105.1| UvrB/UvrC protein:AAA ATPase, central... 158 3e-37 gi|33640781|emb|CAE21236.1| ClpC [Prochlorococcus marinus str. M... 158 3e-37 gi|33861644|ref|NP_893205.1| ClpC [Prochlorococcus marinus subsp... 158 3e-37 gi|39982304|gb|AAR33765.1| clpB protein, putative [Geobacter sul... 158 3e-37 gi|31544696|ref|NP_853274.1| Clp [Mycoplasma gallisepticum R] 158 3e-37 gi|56419503|ref|YP_146821.1| ATP-dependent Clp protease [Geobaci... 158 4e-37 gi|50288205|ref|XP_446531.1| unnamed protein product [Candida gl... 157 4e-37 gi|67874974|ref|ZP_00504525.1| UvrB/UvrC protein:AAA ATPase, cen... 157 6e-37 gi|68056364|ref|ZP_00540488.1| UvrB/UvrC protein:AAA ATPase, cen... 156 9e-37 gi|33240557|ref|NP_875499.1| ATPase with chaperone activity ATP-... 156 9e-37 gi|72382499|ref|YP_291854.1| ATPase [Prochlorococcus marinus str... 156 1e-36 gi|71677561|ref|ZP_00675297.1| AAA ATPase, central region:Clp, N... 156 1e-36 gi|46400786|emb|CAF24235.1| probable endopeptidase ATP-binding c... 155 2e-36 gi|10172715|dbj|BAB03822.1| class III stress response-related AT... 155 2e-36 gi|23126880|ref|ZP_00108763.1| COG0542: ATPases with chaperone a... 155 3e-36 gi|62515994|ref|ZP_00387365.1| COG0542: ATPases with chaperone a... 155 3e-36 gi|62423737|ref|ZP_00378894.1| COG0542: ATPases with chaperone a... 155 3e-36 gi|29606248|dbj|BAC70311.1| putative ATP-dependent Clp protease ... 155 3e-36 gi|28212201|ref|NP_783145.1| negative regulator of genetic compe... 155 4e-36 gi|6466400|gb|AAF12982.1| unknown; Clp protease ATP binding subu... 154 4e-36 gi|15026259|gb|AAK81126.1| ATPases with chaperone activity clpC,... 154 6e-36 AAA_CLPB_204-398_PF00004.17 153 7e-36 AAA_Q5NML2_204-398_PF00004.17 153 7e-36 gi|73749097|ref|YP_308336.1| ATP-dependent Clp protease, ATP-bin... 153 7e-36 gi|68209073|ref|ZP_00561139.1| UvrB/UvrC protein:AAA ATPase, cen... 153 8e-36 gi|71675746|ref|ZP_00673490.1| UvrB/UvrC protein:AAA ATPase, cen... 153 8e-36 gi|62512777|ref|ZP_00384381.1| COG0542: ATPases with chaperone a... 153 9e-36 gi|15487810|gb|AAL00952.1| chaperone ATP-dependent protease [Lac... 153 9e-36 gi|68562872|ref|ZP_00602103.1| UvrB/UvrC protein:AAA ATPase, cen... 153 1e-35 gi|1314297|gb|AAC44446.1| ClpC ATPase 152 2e-35 gi|68195609|gb|EAN10049.1| UvrB/UvrC protein:AAA ATPase, central... 152 2e-35 gi|50589882|ref|ZP_00331357.1| COG0542: ATPases with chaperone a... 152 2e-35 gi|19748664|gb|AAL98096.1| putative ATP-dependent protease [Stre... 152 2e-35 AAA_CLPB_202-396_PF00004.17 152 2e-35 gi|68560433|ref|ZP_00599746.1| UvrB/UvrC protein:AAA ATPase, cen... 152 2e-35 AAA_Q75GT3_284-478_PF00004.17 152 2e-35 gi|62513420|ref|ZP_00384970.1| COG0542: ATPases with chaperone a... 151 2e-35 gi|46135092|ref|ZP_00162367.2| COG0542: ATPases with chaperone a... 151 3e-35 gi|24379042|ref|NP_720997.1| ATP-dependent protease ClpE [Strept... 151 3e-35 gi|67920889|ref|ZP_00514408.1| UvrB/UvrC protein:AAA ATPase, cen... 151 3e-35 gi|56961903|ref|YP_173625.1| ATP-dependent Clp protease ATP-bind... 151 3e-35 AAA_CLPB_203-397_PF00004.17 151 3e-35 gi|30409234|dbj|BAC76183.1| ATP-dependent clp protease ATP-bindi... 151 3e-35 AAA_CLPB1_202-396_PF00004.17 151 5e-35 gi|50554163|ref|XP_504490.1| hypothetical protein [Yarrowia lipo... 151 5e-35 gi|32307598|gb|AAP79204.1| ClpB protease [Bigelowiella natans] 150 6e-35 AAA_CLPB2_203-397_PF00004.17 150 8e-35 AAA_CLPB1_203-397_PF00004.17 150 9e-35 gi|68172787|ref|ZP_00546068.1| UvrB/UvrC protein:AAA ATPase, cen... 150 9e-35 AAA_Q9LF37_277-471_PF00004.17 150 9e-35 gi|26553830|ref|NP_757764.1| ATP-dependent protease binding subu... 150 9e-35 AAA_CLPB_203-397_PF00004.17 150 1e-34 AAA_Q6ALY6_203-397_PF00004.17 150 1e-34 AAA_Q5NE82_201-395_PF00004.17 150 1e-34 gi|62526947|ref|ZP_00388255.1| COG0542: ATPases with chaperone a... 150 1e-34 AAA_CLPB_202-396_PF00004.17 150 1e-34 gi|47459200|ref|YP_016062.1| ATP-dependent Clp protease, ATPase ... 149 1e-34 AAA_CLPB_203-397_PF00004.17 149 1e-34 AAA_Q5H380_238-432_PF00004.17 149 1e-34 gi|28378034|ref|NP_784926.1| ATP-dependent Clp protease, ATP-bin... 149 1e-34 AAA_CLPB_193-386_PF00004.17 149 2e-34 gi|68512803|gb|EAN36605.1| UvrB/UvrC protein:AAA ATPase, central... 149 2e-34 gi|22536667|ref|NP_687518.1| ATP-dependent Clp protease, ATP-bin... 149 2e-34 gi|18146107|dbj|BAB82147.1| ClpC adenosine triphosphatase [Clost... 148 2e-34 AAA_CLPB_203-397_PF00004.17 148 2e-34 gi|29840119|ref|NP_829225.1| ATP-dependent Clp protease, ATP-bin... 148 3e-34 AAA_CLPB_201-395_PF00004.17 148 3e-34 gi|33236295|gb|AAP98384.1| class III stress response-related ATP... 148 3e-34 gi|24213091|ref|NP_710572.1| ATPase (clpc) [Leptospira interroga... 148 3e-34 gi|18203438|sp|Q9S5Z2|CLPE_LACLC ATP-dependent Clp protease ATP-... 148 3e-34 AAA_CLPB_193-386_PF00004.17 148 3e-34 gi|29375303|ref|NP_814457.1| ATP-dependent Clp protease, ATP-bin... 148 3e-34 AAA_CLPB_201-395_PF00004.17 148 4e-34 gi|76163351|gb|EAO57534.1| AAA ATPase, central region:Clp, N ter... 148 4e-34 AAA_CLPB1_203-399_PF00004.17 148 4e-34 gi|48871265|ref|ZP_00323981.1| COG0542: ATPases with chaperone a... 148 4e-34 gi|53763100|ref|ZP_00163644.2| COG0542: ATPases with chaperone a... 148 4e-34 AAA_Q5X4G2_201-395_PF00004.17 148 4e-34 gi|23003239|ref|ZP_00046906.1| COG0542: ATPases with chaperone a... 148 4e-34 gi|67660471|ref|ZP_00457817.1| AAA ATPase, central region:AAA AT... 148 5e-34 AAA_Q5E7D5_201-395_PF00004.17 147 5e-34 gi|22255857|gb|AAM94782.1| CalR4 [Micromonospora echinospora] 147 5e-34 gi|67545689|ref|ZP_00423609.1| AAA ATPase, central region:Clp, N... 147 5e-34 gi|16803037|ref|NP_464522.1| ATP-dependent protease [Listeria mo... 147 5e-34 AAA_Q5LND5_201-395_PF00004.17 147 5e-34 gi|14194530|sp|Q9PKA8|CLPC_CHLMU Probable ATP-dependent Clp prot... 147 5e-34 AAA_Q9LLI0_289-483_PF00004.17 147 6e-34 AAA_CLPB_201-395_PF00004.17 147 6e-34 gi|67158353|ref|ZP_00419344.1| AAA ATPase, central region:Clp, N... 147 7e-34 AAA_CLPB_200-394_PF00004.17 147 7e-34 AAA_CLPB_202-396_PF00004.17 147 7e-34 AAA_CLPB2_203-397_PF00004.17 147 7e-34 gi|52003130|gb|AAU23072.1| ATP-dependent Clp protease-like (clas... 147 7e-34 gi|15458317|gb|AAK99529.1| ATP dependent protease [Streptococcus... 146 8e-34 AAA_CLPB_201-395_PF00004.17 146 8e-34 gi|48869834|ref|ZP_00322573.1| COG0542: ATPases with chaperone a... 146 8e-34 gi|48854713|ref|ZP_00308874.1| COG0542: ATPases with chaperone a... 146 8e-34 AAA_Q5L1U6_202-396_PF00004.17 146 1e-33 AAA_CLPB_202-401_PF00004.17 146 1e-33 AAA_Q5FQY4_202-396_PF00004.17 146 1e-33 gi|67935993|ref|ZP_00529008.1| UvrB/UvrC protein:AAA ATPase, cen... 146 1e-33 AAA_CLPB_201-395_PF00004.17 146 1e-33 AAA_Q5PA28_202-396_PF00004.17 146 1e-33 gi|5921798|sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-b... 146 1e-33 gi|62734338|gb|AAX96447.1| ATPase, AAA family, putative [Oryza s... 146 1e-33 AAA_CLPB_202-396_PF00004.17 146 1e-33 gi|67984753|gb|EAM72758.1| UvrB/UvrC protein:AAA ATPase, central... 146 2e-33 gi|37521111|ref|NP_924488.1| endopeptidase Clp ATP-binding chain... 146 2e-33 AAA_CLPB_206-400_PF00004.17 145 2e-33 AAA_Q5GTA2_203-397_PF00004.17 145 2e-33 AAA_CLPB_197-391_PF00004.17 145 2e-33 gi|14495033|emb|CAC42150.1| putative chaperone [Streptomyces coe... 145 2e-33 AAA_CLPB_201-395_PF00004.17 145 2e-33 AAA_CLPB_203-397_PF00004.17 145 2e-33 gi|48864977|ref|ZP_00318845.1| COG0542: ATPases with chaperone a... 145 3e-33 gi|67921848|ref|ZP_00515365.1| AAA ATPase, central region:Clp, N... 145 3e-33 gi|32444984|emb|CAD74986.1| negative regulator of genetic compet... 145 3e-33 AAA_Q8X1A0_131-325_PF00004.17 145 3e-33 AAA_CLPB_201-394_PF00004.17 145 3e-33 AAA_CLPB_201-395_PF00004.17 145 3e-33 gi|23025097|ref|ZP_00064272.1| COG0542: ATPases with chaperone a... 145 3e-33 gi|58336963|ref|YP_193548.1| ATP-dependent Clp protease, ATP-bin... 145 4e-33 gi|68549442|ref|ZP_00588906.1| UvrB/UvrC protein:AAA ATPase, cen... 144 4e-33 AAA_CLPB_203-397_PF00004.17 144 5e-33 gi|67640681|ref|ZP_00439479.1| COG0542: ATPases with chaperone a... 144 5e-33 gi|15606774|ref|NP_214154.1| ATPase subunit of ATP-dependent pro... 144 5e-33 gi|54307876|ref|YP_128896.1| putative ATPase with chaperone acti... 144 5e-33 AAA_CLPB_203-397_PF00004.17 144 5e-33 gi|23480959|gb|EAA17380.1| clpB protein [Plasmodium yoelii yoelii] 144 6e-33 AAA_Q5NYD0_201-395_PF00004.17 144 6e-33 AAA_Q68XR2_202-396_PF00004.17 143 7e-33 AAA_Q6G134_202-396_PF00004.17 143 7e-33 AAA_Q5QTU7_201-395_PF00004.17 143 7e-33 gi|4980695|gb|AAD35290.1| ATP-dependent Clp protease, ATPase sub... 143 7e-33 AAA_CLPB_199-393_PF00004.17 143 8e-33 AAA_Q7NIW8_202-395_PF00004.17 143 8e-33 AAA_CLPB_202-396_PF00004.17 143 8e-33 gi|28869739|ref|NP_792358.1| clpB protein, putative [Pseudomonas... 143 8e-33 gi|16078434|ref|NP_389253.1| ATP-dependent Clp protease-like (cl... 143 9e-33 gi|22125435|ref|NP_668858.1| putative Clp ATPase [Yersinia pesti... 143 1e-32 AAA_CLPB_205-399_PF00004.17 143 1e-32 AAA_CLPB_204-397_PF00004.17 143 1e-32 AAA_Q9KGG2_205-398_PF00004.17 143 1e-32 gi|73539083|ref|YP_299450.1| AAA ATPase, central region:Clp, N t... 143 1e-32 gi|76165587|gb|EAO59719.1| AAA ATPase, central region:Clp, N ter... 143 1e-32 gi|28377823|ref|NP_784715.1| ATP-dependent Clp protease, ATP-bin... 143 1e-32 gi|53713701|ref|YP_099693.1| ATP-dependent Clp protease [Bactero... 143 1e-32 AAA_CLPB_201-395_PF00004.17 142 2e-32 gi|21673032|ref|NP_661097.1| ATP-dependent Clp protease, ATP-bin... 142 2e-32 gi|67918278|ref|ZP_00511878.1| UvrB/UvrC protein:AAA ATPase, cen... 142 2e-32 AAA_CLPB_201-395_PF00004.17 142 2e-32 gi|71736516|ref|YP_272439.1| ATP-dependent Clp protease ATP-bind... 142 2e-32 AAA_CLPB2_204-398_PF00004.17 142 2e-32 AAA_CLPB_202-397_PF00004.17 142 2e-32 AAA_Q97EC4_207-400_PF00004.17 142 2e-32 AAA_CLPB_201-395_PF00004.17 142 2e-32 AAA_O77222_210-405_PF00004.17 142 2e-32 gi|34499124|ref|NP_903339.1| ATP-dependent Clp protease, ATP-bin... 141 3e-32 gi|48733621|ref|ZP_00267364.1| COG0542: ATPases with chaperone a... 141 3e-32 gi|74317255|ref|YP_314995.1| ATP-dependent Clp protease, ATP-bin... 141 3e-32 AAA_CLPB2_206-400_PF00004.17 141 3e-32 gi|28897788|ref|NP_797393.1| ATP-dependent Clp protease, ATP-bin... 141 3e-32 gi|34499420|ref|NP_903635.1| probable ClpA/B-type chaperone [Chr... 141 3e-32 AAA_CLPB_201-394_PF00004.17 141 4e-32 AAA_Q5BE67_125-318_PF00004.17 141 4e-32 AAA_CLPB1_203-398_PF00004.17 141 4e-32 gi|75675887|ref|YP_318308.1| AAA ATPase [Nitrobacter winogradsky... 141 4e-32 AAA_Q7U7P3_206-399_PF00004.17 141 4e-32 gi|68003568|ref|ZP_00536114.1| AAA ATPase, central region:Clp, N... 141 5e-32 gi|67155734|ref|ZP_00417361.1| AAA ATPase, central region:Clp, N... 141 5e-32 gi|511145|emb|CAA51655.1| hemolysin [Brachyspira hyodysenteriae] 141 5e-32 gi|75187548|ref|ZP_00700815.1| COG0542: ATPases with chaperone a... 141 5e-32 gi|69951133|ref|ZP_00638900.1| AAA ATPase, central region:Clp, N... 140 6e-32 AAA_CLPB_201-395_PF00004.17 140 6e-32 gi|27361601|gb|AAO10508.1| ATP-dependent Clp protease [Vibrio vu... 140 6e-32 AAA_Q96TW3_202-394_PF00004.17 140 7e-32 gi|33641129|emb|CAE22259.1| putative ATP-dependent Clp protease,... 140 7e-32 gi|69938169|ref|ZP_00632702.1| AAA ATPase, central region:Clp, N... 140 7e-32 AAA_Q25646_211-406_PF00004.17 140 8e-32 gi|67916618|ref|ZP_00510321.1| AAA ATPase, central region [Clost... 140 9e-32 gi|37680506|ref|NP_935115.1| ATP-dependent Clp protease, ATP-bin... 140 1e-31 gi|66855575|ref|ZP_00399649.1| AAA ATPase, central region:Clp, N... 140 1e-31 AAA_CLPB_201-395_PF00004.17 140 1e-31 gi|48860810|ref|ZP_00314719.1| COG0542: ATPases with chaperone a... 140 1e-31 AAA_Q7SDI0_128-321_PF00004.17 140 1e-31 gi|17431220|emb|CAD17900.1| PUTATIVE CLPA/B-TYPE CHAPERONE PROTE... 139 1e-31 gi|68529788|gb|EAN52750.1| AAA ATPase, central region:Clp, N ter... 139 1e-31 AAA_Q6RYQ7_204-398_PF00004.17 139 2e-31 gi|32042508|ref|ZP_00140091.1| COG0542: ATPases with chaperone a... 139 2e-31 AAA_CLPB_199-393_PF00004.17 139 2e-31 gi|68194693|gb|EAN09176.1| UvrB/UvrC protein:AAA ATPase, central... 139 2e-31 gi|23024482|ref|ZP_00063692.1| COG0542: ATPases with chaperone a... 139 2e-31 AAA_Q8XHP1_209-402_PF00004.17 138 2e-31 gi|56459783|ref|YP_155064.1| ATP-binding subunit of Clp protease... 138 2e-31 AAA_Q85G08_202-395_PF00004.17 138 2e-31 gi|9837310|gb|AAG00524.1| Clp protease-associated protein ClpB [... 138 3e-31 AAA_CLPB_199-393_PF00004.17 138 3e-31 gi|29338203|gb|AAO76005.1| ATP-dependent Clp protease [Bacteroid... 138 3e-31 AAA_CLPB2_202-397_PF00004.17 138 3e-31 gi|71482365|ref|ZP_00662059.1| UvrB/UvrC protein:AAA ATPase, cen... 138 3e-31 AAA_Q6AC89_75-269_PF00004.17 138 3e-31 AAA_O69287_202-395_PF00004.17 138 3e-31 gi|68178595|ref|ZP_00551709.1| IMP dehydrogenase/GMP reductase:A... 138 3e-31 AAA_Q9WY41_206-399_PF00004.17 138 3e-31 gi|4981954|gb|AAD36462.1| ATP-dependent Clp protease, ATPase sub... 138 3e-31 gi|69936536|ref|ZP_00631320.1| AAA ATPase, central region:Clp, N... 138 3e-31 gi|32043647|ref|ZP_00140909.1| COG0542: ATPases with chaperone a... 138 3e-31 gi|9655617|gb|AAF94303.1| ATP-dependent Clp protease, ATP-bindin... 138 4e-31 gi|55247316|gb|EAA02030.2| ENSANGP00000013686 [Anopheles gambiae... 138 4e-31 gi|45436048|gb|AAS61604.1| putative ATPase subunit of ATP-depend... 138 4e-31 gi|51597920|ref|YP_072111.1| Clp ATPase [Yersinia pseudotubercul... 138 4e-31 gi|39936210|ref|NP_948486.1| endopeptidase Clp: ATP-binding chai... 138 4e-31 gi|66870923|gb|EAL98287.1| UvrB/UvrC protein:AAA ATPase, central... 138 4e-31 AAA_CLPB_202-397_PF00004.17 138 4e-31 gi|46192559|ref|ZP_00006423.2| COG0542: ATPases with chaperone a... 138 5e-31 gi|48864938|ref|ZP_00318807.1| COG0542: ATPases with chaperone a... 138 5e-31 gi|71550791|ref|ZP_00670876.1| AAA ATPase, central region:Clp, N... 137 5e-31 gi|67638450|ref|ZP_00437386.1| COG0542: ATPases with chaperone a... 137 5e-31 AAA_Q7XYJ0_3-191_PF00004.17 137 5e-31 gi|56679738|gb|AAV96404.1| ATP-dependent Clp protease, ATP-bindi... 137 5e-31 gi|67914429|gb|EAM63773.1| UvrB/UvrC protein:AAA ATPase, central... 137 6e-31 AAA_Q7NKD6_211-405_PF00004.17 137 6e-31 gi|228154|prf||1717391A protein Hsp104 137 6e-31 AAA_Q92D24_133-325_PF00004.17 137 6e-31 gi|16126707|ref|NP_421271.1| ATP-dependent Clp protease, ATP-bin... 137 7e-31 gi|46580013|ref|YP_010821.1| ATP-dependent Clp protease, ATP-bin... 137 7e-31 AAA_Q8F906_213-406_PF00004.17 137 8e-31 gi|73748009|ref|YP_307248.1| ATP-dependent Clp protease, ATP-bin... 137 8e-31 gi|53804153|ref|YP_114227.1| ATP-dependent Clp protease, ATP-bin... 136 8e-31 gi|69933402|ref|ZP_00628604.1| AAA ATPase, central region:Clp, N... 136 9e-31 gi|71893457|ref|YP_278903.1| ATP-dependent protease binding prot... 136 9e-31 AAA_Q9XEI1_205-399_PF00004.17 136 9e-31 gi|52858081|ref|ZP_00046852.2| COG0542: ATPases with chaperone a... 136 9e-31 gi|32043234|ref|ZP_00140496.1| COG0542: ATPases with chaperone a... 136 9e-31 AAA_Q7NRW0_214-408_PF00004.17 136 1e-30 gi|51209900|ref|YP_063564.1| Clp protease ATP binding subunit [G... 136 1e-30 AAA_Q9SPH4_204-398_PF00004.17 136 1e-30 gi|67930508|ref|ZP_00523680.1| AAA ATPase, central region:Clp, N... 136 1e-30 gi|68213583|ref|ZP_00565414.1| AAA ATPase, central region:Clp, N... 136 1e-30 gi|73542437|ref|YP_296957.1| AAA ATPase, central region:Clp, N t... 136 1e-30 gi|68552573|ref|ZP_00591961.1| UvrB/UvrC protein:AAA ATPase, cen... 136 1e-30 AAA_CLPB_199-393_PF00004.17 136 1e-30 gi|23009988|ref|ZP_00050835.1| COG0542: ATPases with chaperone a... 136 1e-30 gi|27380264|ref|NP_771793.1| ClpA-like protein [Bradyrhizobium j... 136 1e-30 gi|56414609|ref|YP_151684.1| ClpB-like protein [Salmonella enter... 136 1e-30 AAA_Q873Z4_139-332_PF00004.17 136 2e-30 gi|68540122|ref|ZP_00579887.1| AAA ATPase, central region:Clp, N... 136 2e-30 AAA_Q65KI8_112-304_PF00004.17 135 2e-30 gi|22127238|ref|NP_670661.1| putative protease [Yersinia pestis ... 135 2e-30 AAA_Q93CX3_212-405_PF00004.17 135 2e-30 gi|47574776|ref|ZP_00244811.1| COG0542: ATPases with chaperone a... 135 2e-30 gi|32041712|ref|ZP_00139295.1| COG0542: ATPases with chaperone a... 135 2e-30 gi|14583098|gb|AAK69758.1| CDPK adapter protein 1 [Mesembryanthe... 135 2e-30 AAA_Q7MJ41_237-431_PF00004.17 135 3e-30 AAA_O00828_200-394_PF00004.17 135 3e-30 gi|75815463|ref|ZP_00745971.1| COG0542: ATPases with chaperone a... 135 3e-30 AAA_CLPB_201-381_PF00004.17 135 3e-30 gi|19069667|emb|CAD26052.1| HSP 101 RELATED PROTEIN [Encephalito... 135 3e-30 gi|23098336|ref|NP_691802.1| ATP-dependent Clp proteinase [Ocean... 135 3e-30 gi|67931722|ref|ZP_00524879.1| AAA ATPase, central region:Clp, N... 135 3e-30 gi|67675617|ref|ZP_00472373.1| AAA ATPase, central region:Clp, N... 135 3e-30 gi|23473480|ref|ZP_00128776.1| COG0542: ATPases with chaperone a... 135 4e-30 gi|50084542|ref|YP_046052.1| ATP-binding protease component [Aci... 135 4e-30 gi|10174798|dbj|BAB05898.1| ATP-dependent proteinase [Bacillus h... 134 4e-30 AAA_Q5R0C4_211-405_PF00004.17 134 5e-30 gi|48850364|ref|ZP_00304606.1| COG0542: ATPases with chaperone a... 134 5e-30 gi|71149858|ref|ZP_00648780.1| AAA ATPase, central region:Clp, N... 134 6e-30 gi|30249695|ref|NP_841765.1| ClpA, ATP dependent protease, chape... 134 6e-30 gi|48764527|ref|ZP_00269079.1| COG0542: ATPases with chaperone a... 134 6e-30 AAA_CLPB_335-528_PF00004.17 134 6e-30 gi|3218360|emb|CAA19619.1| clp protease ATP binding subunit [Str... 134 6e-30 gi|71908708|ref|YP_286295.1| AAA ATPase, central region:Clp, N t... 134 6e-30 gi|42518421|ref|NP_964351.1| ATP-dependent clp protease ATP-bind... 134 6e-30 gi|59711606|ref|YP_204382.1| ATP-dependent protease subunit [Vib... 134 6e-30 gi|61099680|ref|ZP_00375141.1| ATPases [Erythrobacter litoralis ... 134 6e-30 gi|13470854|ref|NP_102423.1| endopeptidase Clp ATP-binding chain... 134 6e-30 gi|15606509|ref|NP_213889.1| ATP-dependent Clp protease [Aquifex... 134 7e-30 gi|58583098|ref|YP_202114.1| ClpB [Xanthomonas oryzae pv. oryzae... 134 7e-30 gi|26989814|ref|NP_745239.1| chaperone-associated ATPase, putati... 133 8e-30 Sequences not found previously or not previously below threshold: >gi|8777406|dbj|BAA96996.1| unnamed protein product [Arabidopsis thaliana] Length = 574 Score = 448 bits (1152), Expect = e-124 Identities = 341/486 (70%), Positives = 391/486 (80%), Gaps = 10/486 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DSMEQ NV HVSNAD+VS+RDIARERV++VAERMHRLPDEFL+ELK GL++ILEGN A Sbjct: 73 DSMEQTVNVMHHVSNADKVSVRDIARERVELVAERMHRLPDEFLDELKNGLKSILEGNVA 132 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQSR+DL+S TLV+AHRVQLEILVAINTGIQAFLHPNISLSQ SLIEI Sbjct: 133 QSVDEFMFLQKVVQSRTDLSSVTLVRAHRVQLEILVAINTGIQAFLHPNISLSQPSLIEI 192 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPADDC CDIC+N+KGFCNLCMC IC+KFDF+ NTCRWIGCD+CSH Sbjct: 193 FVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTCRWIGCDLCSH 252 Query: 181 WCHTDCAIREGLIKMGHSAKGA-SGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFE 239 W HTDCAIR+G I G SAK SG E++F C ACN TSEL G+VKDVFQHCAPNWD E Sbjct: 253 WTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRTSELLGWVKDVFQHCAPNWDRE 312 Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD- 298 +L+KELDFV +IFRGSED RG+KLFWK +ELI+K+K L + A ILMFFQE +SD Sbjct: 313 SLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIKGGLAEA-TAAKLILMFFQEIESDS 371 Query: 299 SPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED 358 + S ENGEGG L+APQDACN IAEVVQ+T RKME+VAEEKMRMFKKAR L+ CDRELED Sbjct: 372 AKSFENGEGGRLMAPQDACNRIAEVVQETLRKMEIVAEEKMRMFKKARMALETCDRELED 431 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 KA V++LK ERQKKK QI+ELE IVRLKQAEADMFQLKA+EA+REA+ Sbjct: 432 KAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMDK 491 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCD-------FDPMKMRMESEIRGLL 471 Y S YLK RLSEAE +QYLFE++K QENS+ DP ++ M S+IR LL Sbjct: 492 SEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRVASQSSGGGGDPSQVMMYSKIRDLL 551 Query: 472 KGMEMT 477 +G ++ Sbjct: 552 QGYNLS 557 >gi|6466960|gb|AAF13095.1| unknown protein [Arabidopsis thaliana] Length = 566 Score = 445 bits (1144), Expect = e-123 Identities = 332/478 (69%), Positives = 386/478 (80%), Gaps = 4/478 (0%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +Q +V RHVS AD+VSLRDIARER+D+VAERMHRLP+E+LEELK GL+AILEGNGA Sbjct: 74 DSHDQ--HVIRHVSIADKVSLRDIARERLDIVAERMHRLPEEYLEELKNGLKAILEGNGA 131 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQ+RSDLTS+TLV+AHRVQLE+LV INTGIQAFLHPNI+LSQSSLIEI Sbjct: 132 QPIDEFMFLQKFVQTRSDLTSKTLVRAHRVQLEVLVVINTGIQAFLHPNINLSQSSLIEI 191 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPAD C C+IC+N+KGFCNLCMCVIC+KFDFA NTCRWIGCDVCSH Sbjct: 192 FVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTCRWIGCDVCSH 251 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 W HTDCAIR+G I MG S K SGM EMLF C ACNHTSEL G+VKDVFQHCAPNWD E+ Sbjct: 252 WTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRES 311 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L+KELDFV +IFRGSED RG+KLFWK +EL+EK+K L + A ILMFFQE + DSP Sbjct: 312 LMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGGLAEA-TAAKLILMFFQEIELDSP 370 Query: 301 -SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK 359 SLE+GEGG IAPQDACN IAEVV++T RKME+V EEK RM+KKAR L+ C+RE+E+K Sbjct: 371 KSLESGEGGGTIAPQDACNRIAEVVKETLRKMEIVGEEKTRMYKKARMGLEECEREVEEK 430 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A V +L+MERQKKK QIEE+E IVRLKQAEA+MFQLKA+EA+ EAE Sbjct: 431 AKQVAELQMERQKKKQQIEEVERIVRLKQAEAEMFQLKANEAKVEAERLERIVKAKKEKT 490 Query: 420 XXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 Y S YLKLRLSEAE ++YLFE++K QE+ + + M S+IR +L G + Sbjct: 491 EEEYASNYLKLRLSEAEAEKEYLFEKIKEQESGGNGGEASQAVMYSKIREMLHGYNAS 548 >DUF1423_Q9LUB7_73-557_PF07227.1 Length = 485 Score = 435 bits (1119), Expect = e-120 Identities = 341/486 (70%), Positives = 391/486 (80%), Gaps = 10/486 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DSMEQ NV HVSNAD+VS+RDIARERV++VAERMHRLPDEFL+ELK GL++ILEGN A Sbjct: 1 DSMEQTVNVMHHVSNADKVSVRDIARERVELVAERMHRLPDEFLDELKNGLKSILEGNVA 60 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQSR+DL+S TLV+AHRVQLEILVAINTGIQAFLHPNISLSQ SLIEI Sbjct: 61 QSVDEFMFLQKVVQSRTDLSSVTLVRAHRVQLEILVAINTGIQAFLHPNISLSQPSLIEI 120 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPADDC CDIC+N+KGFCNLCMC IC+KFDF+ NTCRWIGCD+CSH Sbjct: 121 FVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTCRWIGCDLCSH 180 Query: 181 WCHTDCAIREGLIKMGHSAKGA-SGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFE 239 W HTDCAIR+G I G SAK SG E++F C ACN TSEL G+VKDVFQHCAPNWD E Sbjct: 181 WTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRTSELLGWVKDVFQHCAPNWDRE 240 Query: 240 ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD- 298 +L+KELDFV +IFRGSED RG+KLFWK +ELI+K+K L + A ILMFFQE +SD Sbjct: 241 SLMKELDFVSRIFRGSEDQRGRKLFWKCEELIDKIKGGLAEA-TAAKLILMFFQEIESDS 299 Query: 299 SPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELED 358 + S ENGEGG L+APQDACN IAEVVQ+T RKME+VAEEKMRMFKKAR L+ CDRELED Sbjct: 300 AKSFENGEGGRLMAPQDACNRIAEVVQETLRKMEIVAEEKMRMFKKARMALETCDRELED 359 Query: 359 KACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXX 418 KA V++LK ERQKKK QI+ELE IVRLKQAEADMFQLKA+EA+REA+ Sbjct: 360 KAKEVSELKAERQKKKLQIDELERIVRLKQAEADMFQLKANEAKREADRLQRIVLAKMDK 419 Query: 419 XXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQ-------CDFDPMKMRMESEIRGLL 471 Y S YLK RLSEAE +QYLFE++K QENS+ DP ++ M S+IR LL Sbjct: 420 SEEEYASNYLKQRLSEAEAEKQYLFEKIKLQENSRVASQSSGGGGDPSQVMMYSKIRDLL 479 Query: 472 KGMEMT 477 +G ++ Sbjct: 480 QGYNLS 485 >gi|30385713|gb|AAP22955.1| Potyvirus VPg interacting protein [Pisum sativum] Length = 513 Score = 427 bits (1098), Expect = e-118 Identities = 320/469 (68%), Positives = 367/469 (78%), Gaps = 5/469 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R VS+AD +SL+DIARERVDV+ +RMHRLPDEFL+ELK GLRAILEG NG+Q +DEF Sbjct: 24 SVIRRVSSADRISLQDIARERVDVICDRMHRLPDEFLDELKNGLRAILEGGNGSQHRDEF 83 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 LQK VQSRSDLT++TL++AHRVQLEILV+INTGIQ FLHP+ISLSQ+SLIEIFLYKRC Sbjct: 84 FILQKLVQSRSDLTAKTLIRAHRVQLEILVSINTGIQGFLHPSISLSQTSLIEIFLYKRC 143 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIACQN LPAD+C D C+N GFCNLCMCVICSKFDF NTCRWIGCD+ SHW HTDC Sbjct: 144 RNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLXSHWTHTDC 203 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AIRE LI MG S K SG +EM+F C AC+ TS L G+VKDVFQHCAP+WD +ALI+ELD Sbjct: 204 AIREQLICMGPSVKSGSGPSEMVFRCQACSXTSXLLGWVKDVFQHCAPSWDGDALIRELD 263 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS-PSLENG 305 FV +IF GS+D RG LFWK D+L EKLKS+ +D AC ILM FQE D D+ SLEN Sbjct: 264 FVSRIFHGSKDQRGMNLFWKCDDLKEKLKSRKMDSKAACRAILMVFQELDLDNSKSLENA 323 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 E G LIAPQ+ACN IAEVVQ+ RKME VA+EKMRMFKKAR ++ACDREL DKA D Sbjct: 324 ESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARIAVEACDRELADKAREAGD 383 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LK+ERQKKK QIEELE IVRLK AEADMFQLKA+EA+REAE YTS Sbjct: 384 LKVERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTS 443 Query: 426 KYLKLRLSEAEERRQYLFEELKAQEN---SQCDFDPMKMRMESEIRGLL 471 YLK +LSEAE +QYL+E++K QE+ SQ DP M M S+I LL Sbjct: 444 NYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLL 492 >DUF1423_Q9S736_74-548_PF07227.1 Length = 475 Score = 425 bits (1093), Expect = e-117 Identities = 332/478 (69%), Positives = 386/478 (80%), Gaps = 4/478 (0%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +Q +V RHVS AD+VSLRDIARER+D+VAERMHRLP+E+LEELK GL+AILEGNGA Sbjct: 1 DSHDQ--HVIRHVSIADKVSLRDIARERLDIVAERMHRLPEEYLEELKNGLKAILEGNGA 58 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 Q DEFMFLQK VQ+RSDLTS+TLV+AHRVQLE+LV INTGIQAFLHPNI+LSQSSLIEI Sbjct: 59 QPIDEFMFLQKFVQTRSDLTSKTLVRAHRVQLEVLVVINTGIQAFLHPNINLSQSSLIEI 118 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 F+YKRCRNIACQN LPAD C C+IC+N+KGFCNLCMCVIC+KFDFA NTCRWIGCDVCSH Sbjct: 119 FVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTCRWIGCDVCSH 178 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 W HTDCAIR+G I MG S K SGM EMLF C ACNHTSEL G+VKDVFQHCAPNWD E+ Sbjct: 179 WTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHTSELLGWVKDVFQHCAPNWDRES 238 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 L+KELDFV +IFRGSED RG+KLFWK +EL+EK+K L + A ILMFFQE + DSP Sbjct: 239 LMKELDFVSRIFRGSEDTRGRKLFWKCEELMEKIKGGLAEA-TAAKLILMFFQEIELDSP 297 Query: 301 -SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDK 359 SLE+GEGG IAPQDACN IAEVV++T RKME+V EEK RM+KKAR L+ C+RE+E+K Sbjct: 298 KSLESGEGGGTIAPQDACNRIAEVVKETLRKMEIVGEEKTRMYKKARMGLEECEREVEEK 357 Query: 360 ACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXX 419 A V +L+MERQKKK QIEE+E IVRLKQAEA+MFQLKA+EA+ EAE Sbjct: 358 AKQVAELQMERQKKKQQIEEVERIVRLKQAEAEMFQLKANEAKVEAERLERIVKAKKEKT 417 Query: 420 XXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 Y S YLKLRLSEAE ++YLFE++K QE+ + + M S+IR +L G + Sbjct: 418 EEEYASNYLKLRLSEAEAEKEYLFEKIKEQESGGNGGEASQAVMYSKIREMLHGYNAS 475 >DUF1423_Q84N37_19-496_PF07227.1 Length = 478 Score = 421 bits (1082), Expect = e-116 Identities = 320/469 (68%), Positives = 367/469 (78%), Gaps = 5/469 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R VS+AD +SL+DIARERVDV+ +RMHRLPDEFL+ELK GLRAILEG NG+Q +DEF Sbjct: 6 SVIRRVSSADRISLQDIARERVDVICDRMHRLPDEFLDELKNGLRAILEGGNGSQHRDEF 65 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 LQK VQSRSDLT++TL++AHRVQLEILV+INTGIQ FLHP+ISLSQ+SLIEIFLYKRC Sbjct: 66 FILQKLVQSRSDLTAKTLIRAHRVQLEILVSINTGIQGFLHPSISLSQTSLIEIFLYKRC 125 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIACQN LPAD+C D C+N GFCNLCMCVICSKFDF NTCRWIGCD+ SHW HTDC Sbjct: 126 RNIACQNQLPADECSXDTCTNNNGFCNLCMCVICSKFDFEVNTCRWIGCDLXSHWTHTDC 185 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AIRE LI MG S K SG +EM+F C AC+ TS L G+VKDVFQHCAP+WD +ALI+ELD Sbjct: 186 AIREQLICMGPSVKSGSGPSEMVFRCQACSXTSXLLGWVKDVFQHCAPSWDGDALIRELD 245 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDS-PSLENG 305 FV +IF GS+D RG LFWK D+L EKLKS+ +D AC ILM FQE D D+ SLEN Sbjct: 246 FVSRIFHGSKDQRGMNLFWKCDDLKEKLKSRKMDSKAACRAILMVFQELDLDNSKSLENA 305 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 E G LIAPQ+ACN IAEVVQ+ RKME VA+EKMRMFKKAR ++ACDREL DKA D Sbjct: 306 ESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARIAVEACDRELADKAREAGD 365 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LK+ERQKKK QIEELE IVRLK AEADMFQLKA+EA+REAE YTS Sbjct: 366 LKVERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTS 425 Query: 426 KYLKLRLSEAEERRQYLFEELKAQEN---SQCDFDPMKMRMESEIRGLL 471 YLK +LSEAE +QYL+E++K QE+ SQ DP M M S+I LL Sbjct: 426 NYLKQKLSEAEAEKQYLYEKIKLQESSRLSQSSGDPSSMLMYSKIHDLL 474 >gi|8778236|gb|AAF79245.1| F10B6.14 [Arabidopsis thaliana] Length = 760 Score = 407 bits (1046), Expect = e-112 Identities = 231/481 (48%), Positives = 302/481 (62%), Gaps = 14/481 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 285 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 342 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 343 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 402 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 403 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 462 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 463 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 522 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF S Sbjct: 523 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNCKFLIST 582 Query: 301 SLENGEGGF----LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 + F L++ A E + D R++ V AE R K SV + ++ Sbjct: 583 CIRFYRLKFDYILLLSQFLADAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQ 640 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 + K+ A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 641 KKKSFALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKT 694 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+ Sbjct: 695 EKMEEEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEV 754 Query: 477 T 477 T Sbjct: 755 T 755 >gi|30385711|gb|AAP22954.1| Potyvirus VPg interacting protein [Nicotiana benthamiana] Length = 549 Score = 407 bits (1046), Expect = e-112 Identities = 303/474 (63%), Positives = 362/474 (76%), Gaps = 8/474 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R++SN+D++SLRDIARERVDV+AERM LPDE+LE+ K LR ILEG GAQ ++EF Sbjct: 77 SVVRNISNSDKMSLRDIARERVDVIAERMRNLPDEYLEKFKHELRVILEGLGGAQHREEF 136 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 +FLQ+ V SR DLT TL+ HR QLEILVAI TGIQAFLHP++SLSQ+SLI+IFLYKRC Sbjct: 137 LFLQRLVNSRGDLTDGTLIITHRTQLEILVAIKTGIQAFLHPSVSLSQASLIDIFLYKRC 196 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIAC ++LPA++C C+IC+ K GFCNLCMCVIC KFDF N+CRWIGCD+CSHW HTDC Sbjct: 197 RNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGCDLCSHWTHTDC 256 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AI G I G S K + E LF C AC+ TSEL G+VKDVFQHCAP+WD EA ++ELD Sbjct: 257 AISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLGWVKDVFQHCAPSWDAEAFVRELD 316 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 +VR+IF+ SEDARG+KLFWK +ELIEKLK+ + DP+ AC IL FFQE D D S S +N Sbjct: 317 YVRRIFQRSEDARGRKLFWKCEELIEKLKNGVADPM-ACKVILSFFQELDVDPSKSQDND 375 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EGG LIAP++A N+IA+VVQ+ RKME VAEEKMRM KKAR LDACD+EL+DKA VT Sbjct: 376 EGGRLIAPEEAFNKIADVVQEAIRKMEAVAEEKMRMVKKARLALDACDQELKDKAREVTS 435 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LKMERQ+KK QI+ELESIVRLKQAEADMF LKA EARREAE Y S Sbjct: 436 LKMERQRKKQQIDELESIVRLKQAEADMFDLKAGEARREAERLQRIALAKTEKSEEDYAS 495 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQCDFDPM-----KMRMESEIRGLLKGM 474 +YLK RLSEAE +QYLFE++K QE+S+ M S+I+ L+K M Sbjct: 496 RYLKQRLSEAEAEKQYLFEKIKLQESSRASQSSAGGNDPSQMMYSKIQDLIKNM 549 >DUF1423_Q84N38_72-549_PF07227.1 Length = 478 Score = 400 bits (1029), Expect = e-110 Identities = 303/474 (63%), Positives = 362/474 (76%), Gaps = 8/474 (1%) Query: 8 NVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEG-NGAQKKDEF 66 +V R++SN+D++SLRDIARERVDV+AERM LPDE+LE+ K LR ILEG GAQ ++EF Sbjct: 6 SVVRNISNSDKMSLRDIARERVDVIAERMRNLPDEYLEKFKHELRVILEGLGGAQHREEF 65 Query: 67 MFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRC 126 +FLQ+ V SR DLT TL+ HR QLEILVAI TGIQAFLHP++SLSQ+SLI+IFLYKRC Sbjct: 66 LFLQRLVNSRGDLTDGTLIITHRTQLEILVAIKTGIQAFLHPSVSLSQASLIDIFLYKRC 125 Query: 127 RNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDC 186 RNIAC ++LPA++C C+IC+ K GFCNLCMCVIC KFDF N+CRWIGCD+CSHW HTDC Sbjct: 126 RNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGCDLCSHWTHTDC 185 Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELD 246 AI G I G S K + E LF C AC+ TSEL G+VKDVFQHCAP+WD EA ++ELD Sbjct: 186 AISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLGWVKDVFQHCAPSWDAEAFVRELD 245 Query: 247 FVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENG 305 +VR+IF+ SEDARG+KLFWK +ELIEKLK+ + DP+ AC IL FFQE D D S S +N Sbjct: 246 YVRRIFQRSEDARGRKLFWKCEELIEKLKNGVADPM-ACKVILSFFQELDVDPSKSQDND 304 Query: 306 EGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD 365 EGG LIAP++A N+IA+VVQ+ RKME VAEEKMRM KKAR LDACD+EL+DKA VT Sbjct: 305 EGGRLIAPEEAFNKIADVVQEAIRKMEAVAEEKMRMVKKARLALDACDQELKDKAREVTS 364 Query: 366 LKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS 425 LKMERQ+KK QI+ELESIVRLKQAEADMF LKA EARREAE Y S Sbjct: 365 LKMERQRKKQQIDELESIVRLKQAEADMFDLKAGEARREAERLQRIALAKTEKSEEDYAS 424 Query: 426 KYLKLRLSEAEERRQYLFEELKAQENSQCDFDPM-----KMRMESEIRGLLKGM 474 +YLK RLSEAE +QYLFE++K QE+S+ M S+I+ L+K M Sbjct: 425 RYLKQRLSEAEAEKQYLFEKIKLQESSRASQSSAGGNDPSQMMYSKIQDLIKNM 478 >gi|20148719|gb|AAM10250.1| unknown protein [Arabidopsis thaliana] Length = 733 Score = 395 bits (1016), Expect = e-108 Identities = 227/477 (47%), Positives = 295/477 (61%), Gaps = 33/477 (6%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 285 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 342 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 343 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 402 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 403 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 462 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 463 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 522 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF Sbjct: 523 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFN------- 575 Query: 301 SLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKA 360 E + D R++ V AE R K SV + ++ + K+ Sbjct: 576 ----------------YAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQKKKS 617 Query: 361 CAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXX 420 A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 618 FALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKTEKME 671 Query: 421 XXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+T Sbjct: 672 EEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEVT 728 >DUF1423_Q9LQV7_285-755_PF07227.1 Length = 471 Score = 376 bits (965), Expect = e-103 Identities = 231/481 (48%), Positives = 302/481 (62%), Gaps = 14/481 (2%) Query: 1 DSMEQIANVERHVSNADEVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGA 60 DS +++AN+E + + E L DI + + VA + + DE LE KE LR +++ Sbjct: 1 DSRKKVANLEDNDAVRSERVLYDIVSKSISSVALIIQGMADETLESAKEYLRNLIDS--P 58 Query: 61 QKKDEFMFLQKAVQSRSDLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEI 120 +KK++ + LQ + RSDL+ ETL K + QL+ILVA+ TG++ FL I + + L+EI Sbjct: 59 EKKEKLVNLQNQIDKRSDLSKETLSKCVKDQLDILVAVRTGLKYFLSGKIRIPMNELVEI 118 Query: 121 FLYKRCRNIACQNLLPADDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSH 180 FL+ RCRN+ C++LLP DDC+C ICSN KGFC+ CMC +C +FD ASNTC W+GCDVCSH Sbjct: 119 FLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGCDVCSH 178 Query: 181 WCHTDCAIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEA 240 WCH C I++ LIK GHS KG G TEM+FHCI C H SE+FGFVKDVF CA NW E Sbjct: 179 WCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCAKNWGLET 238 Query: 241 LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSP 300 LIKELD VRK+FRGS+DA+GK L KA+E+++KL+SK I PLDA NFI+ FF S Sbjct: 239 LIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPLDASNFIIQFFNCKFLIST 298 Query: 301 SLENGEGGF----LIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDREL 356 + F L++ A E + D R++ V AE R K SV + ++ Sbjct: 299 CIRFYRLKFDYILLLSQFLADAESIPEIPDPPRELTVAAETSYR--KDEASVTPSTSKDQ 356 Query: 357 EDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXX 416 + K+ A+TD M + LES+VR+K+AE MFQ KADEAR EAE Sbjct: 357 KKKSFALTDAMMN------SFDSLESMVRIKEAETRMFQKKADEARIEAESFKRMIEMKT 410 Query: 417 XXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 YT K +L L E EERR+ EELK ENS CD+ MK+RME+EI GLLK ME+ Sbjct: 411 EKMEEEYTEKLARLCLQETEERRRNKLEELKKLENSHCDYRNMKLRMEAEIAGLLKRMEV 470 Query: 477 T 477 T Sbjct: 471 T 471 >gi|28973711|gb|AAO64172.1| unknown protein [Arabidopsis thaliana] Length = 975 Score = 370 bits (950), Expect = e-101 Identities = 216/460 (46%), Positives = 289/460 (62%), Gaps = 4/460 (0%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 514 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 571 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 572 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 631 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 632 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 691 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 692 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 751 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 752 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 809 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 +E QDTA V ++ K++ SV DA RE + + CAV K+P+ Sbjct: 810 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAVEMELERGSPKEPRF 869 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE 437 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+E Sbjct: 870 EELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQE 929 Query: 438 RRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 RR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 930 RRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 969 >gi|7573333|emb|CAB87803.1| putative protein [Arabidopsis thaliana] Length = 1162 Score = 365 bits (936), Expect = 2e-99 Identities = 216/460 (46%), Positives = 289/460 (62%), Gaps = 4/460 (0%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 701 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 758 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 759 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 818 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 819 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 878 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 879 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 938 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 939 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 996 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 +E QDTA V ++ K++ SV DA RE + + CAV K+P+ Sbjct: 997 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAVEMELERGSPKEPRF 1056 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE 437 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+E Sbjct: 1057 EELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQE 1116 Query: 438 RRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 RR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 1117 RRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 1156 >DUF1423_Q84TI3_497-969_PF07227.1 Length = 473 Score = 348 bits (894), Expect = 2e-94 Identities = 216/460 (46%), Positives = 289/460 (62%), Gaps = 4/460 (0%) Query: 18 EVSLRDIARERVDVVAERMHRLPDEFLEELKEGLRAILEGNGAQKKDEFMFLQKAVQSRS 77 E +R I + + V+ +R H +P + LKE +R ++ K + Q A+Q+R+ Sbjct: 18 ETVIRYILSDSMPVMTKRFHEMPTRNITSLKENIRQMMLN--MDKNVQLGAFQDALQNRT 75 Query: 78 DLTSETLVKAHRVQLEILVAINTGIQAFLHPNISLSQSSLIEIFLYKRCRNIACQNLLPA 137 D+T E L K+HR QLEILVA+ +G FL + S+S S L EIF+ RC+N++C+ LLP Sbjct: 76 DITLELLTKSHRAQLEILVALKSGRSDFLLLDNSISSSHLAEIFMNMRCKNLSCRVLLPV 135 Query: 138 DDCDCDICSNKKGFCNLCMCVICSKFDFASNTCRWIGCDVCSHWCHTDCAIREGLIKMGH 197 D+CDC +CS K GFC+ CMC++CS FD ASNTC W+GCDVC HWCHTDC I+E I+ G Sbjct: 136 DECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGCDVCLHWCHTDCGIKESYIRNGI 195 Query: 198 SAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED 257 +A GA GMTEM FHC+ACNH SE+FGFVK+VF + A W FE KEL++V KIF S+D Sbjct: 196 NASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIFSSSKD 255 Query: 258 ARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDAC 317 +RGK+L AD ++ LKSKLI +ACN IL F +CDS +P+ F+ Sbjct: 256 SRGKQLRQAADAMLASLKSKLIGLPEACNRILGFISDCDSSTPA--ETSAPFIYEQPKPR 313 Query: 318 NEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI 377 +E QDTA V ++ K++ SV DA RE + + CAV K+P+ Sbjct: 314 HERGSPSQDTAWLRSVCSDNPHNQLKRSASVADAFHRERQVEICAVEMELERGSPKEPRF 373 Query: 378 EELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE 437 EELESIVR+KQAEA+MFQ +AD+ARREAE Y + KL + +A+E Sbjct: 374 EELESIVRMKQAEAEMFQGRADDARREAEGLKRIAIAKKEKIEEEYNRRMGKLSMEDAQE 433 Query: 438 RRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 RR+ +EEL+A + Q +F MKMRME E+RGLL MEMT Sbjct: 434 RRRRRYEELEAMQRGQREFYEMKMRMEEEMRGLLTKMEMT 473 >gi|68229264|ref|ZP_00568461.1| AAA ATPase, central region:Clp, N terminal [Frankia sp. EAN1pec] Length = 870 Score = 230 bits (587), Expect = 6e-59 Identities = 47/276 (17%), Positives = 93/276 (33%), Gaps = 21/276 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 + F + + + +I +D + + ++ + + Sbjct: 250 GSKLRGEFEERLTSVLTEIREAEGQIITFIDELHTVVGAGAAEGAMDAGNMLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 ++I ++ + FQ PS+E+ G ++ E+ V+ Sbjct: 310 LRMIGATTLDEYRTRIEKDPALERRFQPVMVGEPSVEDTIG--ILRGLKERYEVHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D A + L+ME + ++ELE VR Sbjct: 368 TDSALVAAATLSDRYVTARFLPDKAID--LMD--EAASRLRMEIDSRPVAVDELERAVRR 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + D+A RE T+++ + + +SE ++ ++ L Sbjct: 424 LEIEDMALSKENDDASRERRDRLQRELAEKREELSALTARWQREKNSISEVQKIKEELEN 483 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM-EMT 477 +A E ++ D D K I L K + E T Sbjct: 484 ARRAAEMAERDLDLAKAGELRYGTIPTLEKRLAEAT 519 >gi|68172762|ref|ZP_00546043.1| AAA ATPase, central region:Clp, N terminal [Frankia sp. CcI3] Length = 869 Score = 229 bits (585), Expect = 1e-58 Identities = 46/274 (16%), Positives = 91/274 (33%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 + F + + + +I +D + + ++ + + Sbjct: 250 GSKLRGEFEERLTSVLNEIREAEGQIITFIDELHTVVGAGAAEGAMDAGNMLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 ++I ++ + FQ P++E+ G ++ E+ V+ Sbjct: 310 LRMIGATTLEEYRTRIEKDPALERRFQPVLVGEPTVEDTIG--ILRGLKERYEVHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D A + L+ME + I+ELE VR Sbjct: 368 TDTALVAAATLSDRYVTARFLPDKAID--LVD--EAASRLRMEIDSRPVAIDELERAVRR 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + DEA RE T+++ + + +SE ++ ++ L Sbjct: 424 LEIEDMALSKENDEASRERRGRLQRELADRREELSSLTARWHREKDSISEVQKIKEELEN 483 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 +A E ++ D D K I L K + Sbjct: 484 ARRAVELAERDLDLAKAGELRYGTIPTLEKRLSA 517 >gi|4098131|gb|AAD00218.1| clpB [Mycobacterium bovis] Length = 877 Score = 228 bits (582), Expect = 3e-58 Identities = 42/275 (15%), Positives = 87/275 (31%), Gaps = 21/275 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 + F + + +I +D + I ++ + Sbjct: 277 GSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARG 336 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + +L+ ++ + FQ+ PS+E+ G ++ E+ V+ Sbjct: 337 ELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIG--ILRGLKDRYEVHHGVR 394 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R A D L D A + L+ME + +I+E+E +VR Sbjct: 395 ITDSALVAAATLSDRYITARFLPDKAID--LVD--EAASRLRMEIDSRPVEIDEVERLVR 450 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 + E + DEA E T+++ + + + ++ L Sbjct: 451 RLEIEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLE 510 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E ++ D D K I + K ++ Sbjct: 511 ALRGESERAERDGDLAKAAELRYGRIPEVEKKLDA 545 >gi|56543894|gb|AAV90048.1| ATP-dependent Clp protease [Zymomonas mobilis subsp. mobilis ZM4] Length = 864 Score = 227 bits (579), Expect = 5e-58 Identities = 38/272 (13%), Positives = 78/272 (28%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 251 GAKYRGEFEERLKGVLDEVKQSDGQIILFIDEMHTLIGAGKSDGAMDAGNLLKPALARGE 310 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ P++E+ ++ E V+ Sbjct: 311 LHCIGATTLAEYQKYVEKDPALQRRFQPVYVGEPTVEDTI--SILRGLKEKYEAHHGVRI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D A + L+ME K +IE L+ + Sbjct: 369 TDAALVSAATLSNRYITNRFLPDKAID--LVD--EAASRLRMEVDSKPEEIENLDRRIIQ 424 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL--RLSEAEERRQYLFE 444 + E + + D+A R+ T+++ ++ ++ L + Sbjct: 425 LKIEREALLKENDDASRDRLATLEHDLSDLEQQSSELTTRWKNEQDKIKAEARLKEKLDQ 484 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 A E ++ D K I L K + Sbjct: 485 ARIALEQAERSGDLTKAGEISYGIIPQLEKQL 516 >gi|26248955|ref|NP_754995.1| ClpB protein [Escherichia coli CFT073] Length = 861 Score = 227 bits (578), Expect = 7e-58 Identities = 36/274 (13%), Positives = 83/274 (30%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 252 GAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGE 311 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ PS+E+ ++ E+ VQ Sbjct: 312 LHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIA--ILRGLKERYELHHHVQI 369 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++M+ K +++ L+ + Sbjct: 370 TDPAIVAAATLSHRYIADRQLPDKAID--LID--EAASSIRMQIDSKPEELDRLDRRIIQ 425 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFE 444 + E ++DEA ++ ++ + S + + L + Sbjct: 426 LKLEQQALMKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 485 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 A E ++ D +M +I L K +E Sbjct: 486 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEA 519 >gi|41409951|ref|NP_962787.1| ClpB [Mycobacterium avium subsp. paratuberculosis K-10] Length = 848 Score = 226 bits (577), Expect = 1e-57 Identities = 44/275 (16%), Positives = 87/275 (31%), Gaps = 21/275 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 F + + +I +D + I ++ + Sbjct: 248 GAKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARG 307 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + +L+ ++ + FQ+ PS+E+ G ++ E+ V+ Sbjct: 308 ELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDTVG--ILRGLKDRYEVHHGVR 365 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R A D L D A + LKME + +I+E+E +VR Sbjct: 366 ITDSALVAAATLSDRYITARFLPDKAID--LVD--EAASRLKMEIDSRPVEIDEVERLVR 421 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 + E + DEA +E T+++ + + E ++ L Sbjct: 422 RLEIEEMALAKEEDEASKERLEKLRSELADQKEKLAELTTRWQNEKNAIDVVRELKEQLE 481 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 + ++ D D K I + K +E Sbjct: 482 TLRGESDRAERDGDLAKAAELRYGRIPEVEKKLEA 516 >gi|67153835|ref|ZP_00415580.1| AAA ATPase, central region:Clp, N terminal [Azotobacter vinelandii AvOP] Length = 946 Score = 226 bits (576), Expect = 1e-57 Identities = 35/272 (12%), Positives = 79/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 340 GAKFRGEFEERLKAVLNELAKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 399 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D PS E+ ++ E+ V Sbjct: 400 LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIA--ILRGLKERYEVHHGVTI 457 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A+ R + A D L D A + ++ME K +++ L+ + Sbjct: 458 TDGAIIAAAKLSHRYITDRQLPDKAID--LID--EAASRIRMEIDSKPEELDRLDRRLIQ 513 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-EERRQYLFEE 445 + E + + + DEA ++ + + + Q E+ Sbjct: 514 LKIEREALKKETDEATKKRLAKLEEDIAKLEREYADLEEIWKSEKAEVQGSAQIQQQLEQ 573 Query: 446 LK-AQENSQCDFDP--MKMRMESEIRGLLKGM 474 K E ++ D M I L + + Sbjct: 574 AKLDLEAARRKGDLNRMAELQYGLIPELERKL 605 >gi|68537287|ref|ZP_00577067.1| AAA ATPase, central region:Clp, N terminal [Sphingopyxis alaskensis RB2256] Length = 859 Score = 226 bits (576), Expect = 1e-57 Identities = 39/272 (14%), Positives = 79/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 251 GAKYRGEFEERLKGVLDDVKAAEGEIILFIDEMHTLVGAGKSEGAMDASNLLKPALARGE 310 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ P++E+ ++ E+ V+ Sbjct: 311 LHCIGATTLDEYRKHVEKDPALQRRFQPVFVGEPTVEDSI--SILRGIKEKYELHHGVRI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D A + ++ME + K +IE L+ + Sbjct: 369 TDGAIVAAATLSHRYISDRFLPDKAID--LMD--EAASRIRMEVESKPEEIETLDRRIIQ 424 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E ++D A ++ T K+ K ++ + ++ L Sbjct: 425 MKIEEAALGKESDAASKDRLASLQAELANLEQQSAELTQKWQAEKEKIHAEAKIKEELDA 484 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 A E +Q D K I L K + Sbjct: 485 ARSALEQAQRAGDLAKAGELSYGTIPALEKRL 516 >gi|27376515|ref|NP_768044.1| ATP-dependent protease ATP-binding subunit [Bradyrhizobium japonicum USDA 110] Length = 879 Score = 225 bits (573), Expect = 3e-57 Identities = 36/272 (13%), Positives = 78/272 (28%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + I +D + + + + + + Sbjct: 250 GAKYRGEFEERLKAVLQEVTGSEGTFILFIDEMHTLIGAGKGDGAMDASNLLKPALARGE 309 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ PS+E+ ++ E V+ Sbjct: 310 LHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTI--SILRGLKDKYEQHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D A LKM+ K +++ ++ + Sbjct: 368 TDSALVASATLSNRYITDRFLPDKAID--LMD--EAAARLKMQVDSKPEELDSMDREIIR 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + ++D + T+++ K +LS+A++ + L Sbjct: 424 LKIEQEALKKESDAGSKSRLQTLEKELVELEEKSASLTARWSAEKNKLSDAQKLKAELDG 483 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 N+Q + K I L + + Sbjct: 484 LRVELANAQRRGEFQKAGELAYGRIPELERQL 515 >gi|48849033|ref|ZP_00303277.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Novosphingobium aromaticivorans DSM 12444] Length = 859 Score = 224 bits (570), Expect = 5e-57 Identities = 37/272 (13%), Positives = 79/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 251 GAKYRGEFEERLKAVLDEVKGAEGEIILFIDEMHTLIGAGKSEGAMDAGNLLKPALARGE 310 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ P++E+ ++ E+ V+ Sbjct: 311 LHCIGATTLDEYQKYVEKDPALQRRFQPVFVGEPTVEDTI--SILRGIKDKYELHHGVRI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A + ++ME + K +IE+L+ + Sbjct: 369 ADNAIVAAATLSNRYISDRFLPDKAID--LMD--EAASRIRMEVESKPEEIEKLDRRIIQ 424 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE--RRQYLFE 444 + E + D+A ++ T+++ R A E ++ L Sbjct: 425 MKIEEMALAKETDQASKDRLATLREELANQEQQSAELTTRWQNERDKIAAEGKVKEALDA 484 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 E +Q + D K I L + + Sbjct: 485 ARSELEVAQRNGDLAKAGELAYGRIPELERQL 516 >gi|54294637|ref|YP_127052.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella pneumophila str. Lens] Length = 858 Score = 223 bits (569), Expect = 8e-57 Identities = 36/272 (13%), Positives = 83/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKGVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 308 LHCIGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME K +++LE + Sbjct: 366 TDPALVAAATLSHRYISDRQLPDKAID--LID--EAASLIRMEIDSKPESMDKLERRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + + + DEA ++ + + + + + ++ L + Sbjct: 422 LKIEREALKKENDEASKKRLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQ 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 E ++ D +M I L K + Sbjct: 482 AKLEMETARRAGDLSRMSELQYGRIPELEKRL 513 >gi|71891969|ref|YP_277699.1| ATP-dependent protease [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 858 Score = 223 bits (568), Expect = 9e-57 Identities = 36/272 (13%), Positives = 87/272 (31%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + + + +I +D + + + + + + Sbjct: 248 GTKYRGEFEERLKSVLSDVSKEDSNIILFIDELHTMVGAGKTDGAMDASNMLKPRLSRGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ PS+E+ ++ E+ V Sbjct: 308 LHCVGATTLDEYSKYIEKDAALERRFQKIFVSEPSVEDTIA--ILRGLKERYELHHNVHI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++++ K +++ LE + Sbjct: 366 TDPAIVAAAILSHRYISDRQLPDKAID--LID--EAASSIRIQIDSKPEELDRLERRIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + ++D+A + ++ K + LS A+ + L + Sbjct: 422 LKLEQQALKKESDDASMKRLNLLTTELIQKEQNYINLEKEWKKEKVSLSNAQSIKSDLEQ 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 A + ++ D +M +I L K + Sbjct: 482 AKIAIDQARRVGDLARMSELQYGKIPELEKKL 513 >gi|61679305|gb|AAX52932.1| ClpB [Bifidobacterium animalis subsp. animalis] Length = 899 Score = 223 bits (568), Expect = 1e-56 Identities = 39/272 (14%), Positives = 81/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 + F + + +I +D + I ++ + + Sbjct: 253 GSKYRGEFEERLKGVLDEIKQSDGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGE 312 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 +LI ++ + FQ+ PS+E+ ++ E V Sbjct: 313 LRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIA--ILRGLKQRYEAHHKVTI 370 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R + A D L D A L+ME + +I+EL+ V Sbjct: 371 GDDALVAAATLSNRYITGRQLPDKAID--LVD--EAAAHLRMELDSQPEEIDELQRKVTR 426 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFE 444 + E + D A +E +++ + + + R L E Sbjct: 427 LEMEEMQLKKAEDPASKERLAKLQSELADAREKLAGLNARWNAEKEGHNKVGDLRAQLDE 486 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + + + + D K + EI + K + Sbjct: 487 KRVEADKATREGDLAKASRILYGEIPAIQKQL 518 >gi|39937493|ref|NP_949769.1| endopeptidase Clp: ATP-binding subunit B, clpB [Rhodopseudomonas palustris CGA009] Length = 879 Score = 222 bits (567), Expect = 1e-56 Identities = 33/272 (12%), Positives = 75/272 (27%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 250 GAKYRGEFEERLKAVLNEVTAAEGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGE 309 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ P++E+ ++ E V+ Sbjct: 310 LHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDT--VSILRGLKDKYEQHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + R A D L D A LKM+ K +++ ++ + Sbjct: 368 ADSALVAAVTLSNRYITDRFLPDKAID--LMD--EAAARLKMQVDSKPEELDSMDREIVR 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + + D + T ++ K +LS+A++ + L Sbjct: 424 LKIEQEALKKETDPGSKARLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQKLKSELDA 483 Query: 445 ELKAQENSQC--DFDPMKMRMESEIRGLLKGM 474 N+Q ++ I L K + Sbjct: 484 LRIELANAQRRGEYQRAGELAYGRIPELEKKI 515 >gi|72160604|ref|YP_288261.1| ATPase [Thermobifida fusca YX] Length = 867 Score = 222 bits (567), Expect = 1e-56 Identities = 39/273 (14%), Positives = 82/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + ++ + + Sbjct: 248 GAKYRGEFEERLKAVLNEIKQSEGQIITFIDELHTVVGAGAAEGAMDAGNMLKPMLARGE 307 Query: 276 S---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + ++ + FQ+ + PS + ++ E VQ Sbjct: 308 LRMVGATTLDEYRERIEKDPALERRFQQVMVNEPSAADTIA--ILRGLKGRYEAHHKVQI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A + L+ME + +I+EL+ +V Sbjct: 366 ADSALVAAATLSDRYITARFLPDKAID--LID--EAASRLRMEIDSQPVEIDELQRVVDR 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFE 444 + E ++D A ++ +++ + + E ++ L E Sbjct: 422 LKMEEMALSKESDAASKQRLERLRADLADKEEQLNALIARWEQEKAGLNRVGELKEKLDE 481 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 E +Q D D M EI L + +E Sbjct: 482 LRGQAERAQRDGDFEEASRLMYGEIPQLERQLE 514 >gi|71368674|ref|ZP_00659163.1| AAA ATPase, central region:Clp, N terminal [Nocardioides sp. JS614] Length = 866 Score = 222 bits (566), Expect = 2e-56 Identities = 39/275 (14%), Positives = 82/275 (29%), Gaps = 21/275 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + +I +D + + ++ + Sbjct: 252 GAKYRGEFEERLKAVLEEIKAAGGQVITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARG 311 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + +I ++ + FQ+ PS+E+ ++ E V+ Sbjct: 312 ELHMIGATTLDEYRERIEKDPALERRFQQVFVGEPSVEDTI--QILRGIQEKYEAHHGVR 369 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R + A D L D A + L+ME + +I+ L V Sbjct: 370 ITDAALVAAATLSDRYISGRQLPDKAID--LID--EAASRLRMEIESSPEEIDRLRRAVE 425 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 + E ++DEA +E +++ + + L E R+ L Sbjct: 426 RLKMEEFALAKESDEASKERLANLRQDLADHEEELRALEARWEREKSTLEGEGELRRQLD 485 Query: 444 EELKAQENSQCDFD--PMKMRMESEIRGLLKGMEM 476 + + Q + D + I L + +E Sbjct: 486 QLRMEADRLQREGDLGKASELLYGRIPALEQQIEA 520 >gi|41326957|emb|CAF20801.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Corynebacterium glutamicum ATCC 13032] Length = 852 Score = 222 bits (565), Expect = 2e-56 Identities = 41/274 (14%), Positives = 86/274 (31%), Gaps = 21/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + ++ +D + I L+ + Sbjct: 249 GAKYRGEFEERLKAVLDEIKGANGEVVTFIDELHTIVGAGASGESAMDAGNMIKPLLARG 308 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + +L+ ++ + FQ+ P++E+ G ++ E+ V+ Sbjct: 309 ELRLVGATTLNEYRKYIEKDAALERRFQQVYVGEPTVEDAIG--ILRGLKERYEVHHGVR 366 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + AE R A D L D A + L+ME +I+ELE IVR Sbjct: 367 IQDSALVAAAELSNRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPQEIDELERIVR 422 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 + E ++D A +E +++ + + + E ++ L Sbjct: 423 RLEIEEMALSKESDAASKERLEKLRSELADEREKLSELKARWQNEKTAIDDVREMKEELE 482 Query: 444 EELKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 + ++ D + + I L K +E Sbjct: 483 ALRSESDIAERDGNYGRVAELRYGRIPELEKQIE 516 >gi|17982078|gb|AAL51377.1| ATP-DEPENDENT CLP PROTEASE, ATP-BINDING SUBUNIT CLPB [Brucella melitensis 16M] Length = 931 Score = 222 bits (565), Expect = 2e-56 Identities = 37/272 (13%), Positives = 84/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 306 GAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDASNLLKPALARGE 365 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ D P++E+ ++ E V+ Sbjct: 366 LHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTI--SILRGLKEKYEQHHKVRV 423 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A + L+M+ K +++E++ + Sbjct: 424 SDSALVAAAMLSNRYITDRFLPDKAID--LVD--EAASRLRMQVDSKPEELDEIDRRIMQ 479 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + +++ D A ++ T+K+ K +L A + ++ L E Sbjct: 480 LKIEREALKVETDAASKDRLQRIEKELSDLEEESAELTAKWQAEKQKLGLAADLKRQLEE 539 Query: 445 ELKAQENSQC--DFDPMKMRMESEIRGLLKGM 474 A +Q +F I L K + Sbjct: 540 ARNALAIAQRNGEFQKAGELAYGTIPQLEKQL 571 >gi|75824073|ref|ZP_00753540.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Vibrio cholerae RC385] Length = 857 Score = 222 bits (565), Expect = 2e-56 Identities = 35/274 (12%), Positives = 81/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHHVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++M+ K +++LE + Sbjct: 366 TDPAIVAAASLSHRYISDRQLPDKAID--LID--EAASSIRMQIDSKPEALDKLERKIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + DEA + + + LS + + L + Sbjct: 422 LKIEQQALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQ 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 E ++ D M I L K +++ Sbjct: 482 ARMDLEVARRAGDLNRMSELQYGRIPELEKQLDL 515 >gi|61102045|ref|ZP_00377499.1| ATP-dependent Clp protease [Erythrobacter litoralis HTCC2594] Length = 859 Score = 221 bits (564), Expect = 3e-56 Identities = 40/273 (14%), Positives = 79/273 (28%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + Sbjct: 251 GAKYRGEFEERLKAVLDEVKGADGQIILFIDEMHTLIGAGASEGSMDASNLLKPALSRGE 310 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ D PS+E+ ++ E+ V Sbjct: 311 LHCIGATTLDEYQKYVEKDPALQRRFQSVYIDEPSVEDTI--SILRGIAEKYELHHGVNI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME + K +IE L+ + Sbjct: 369 TDGALVAAARLSDRYIQNRFLPDKAID--LMD--EAASRIRMEVESKPEEIENLDRRIIQ 424 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE--RRQYLFE 444 + E + + D A ++ T+++ R E ++ L + Sbjct: 425 LKIEEQALEKETDSASKDRLETLRKELSELEQKSSELTTRWQNERDKIQGETRIKEELDQ 484 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E ++ D K I L K +E Sbjct: 485 ARIELEQAERSGDLAKAGELSYGRIPELEKKLE 517 >gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 857 Score = 221 bits (563), Expect = 3e-56 Identities = 38/272 (13%), Positives = 82/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 246 GAKYRGEFEERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGE 305 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ EI VQ Sbjct: 306 LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIA--ILRGLKERYEIHHHVQI 363 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + L+ME K +++LE + Sbjct: 364 TDPAIVAAATLSHRYISDRQLPDKAID--LID--EAASSLRMEIDSKPEPLDKLERRIIQ 419 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + E Q + DEA R+ + + + + + L Sbjct: 420 LKLERQALQKEEDEASRQRLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELEN 479 Query: 445 ELKAQENSQCD--FDPMKMRMESEIRGLLKGM 474 + ++ + F+ M +I L K + Sbjct: 480 ARIEMDQARRENNFEKMSELQYGKIPALEKQL 511 >gi|68538354|ref|ZP_00578132.1| AAA ATPase, central region:Clp, N terminal [Sphingopyxis alaskensis RB2256] Length = 862 Score = 221 bits (563), Expect = 4e-56 Identities = 40/273 (14%), Positives = 82/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + Sbjct: 251 GAKYRGEFEERLKAVIDEVKNSDGQIILFIDEMHTLIGAGASEGSMDASNLLKPALSRGE 310 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 +I + + FQ D PS+E+ ++ E+ V Sbjct: 311 LHVIGATTLDEYQKYVEKDAALQRRFQPVYIDEPSVEDTI--SILRGLKEKYELHHGVNI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A+ R + A D L D A + ++ME + K +IE L+ + Sbjct: 369 TDSAIVAAAQLSDRYIQNRFLPDKAID--LMD--EAASRIRMEVESKPEEIENLDRRIIQ 424 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL--RLSEAEERRQYLFE 444 + E ++DEA ++ T+++ ++ + ++ L Sbjct: 425 LKIEESALAKESDEASKDRLATLRKELAELEQKSSELTTRWQNERDKIQAEAKIKEQLDL 484 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E +Q D K I L K +E Sbjct: 485 ARLELEQAQRAGDLQKAGELSYGTIPSLEKQLE 517 >gi|49612793|emb|CAG76243.1| ClpB protein (heat shock protein f84.1) [Erwinia carotovora subsp. atroseptica SCRI1043] Length = 858 Score = 221 bits (563), Expect = 4e-56 Identities = 33/274 (12%), Positives = 81/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ P++E+ ++ E+ VQ Sbjct: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIA--ILRGLKERYELHHHVQI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++++ K ++ LE + Sbjct: 366 TDPAIVAAAMLSHRYISDRKLPDKAID--LID--EAASSIRIQIDSKPEPLDRLERRIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFE 444 + E + ++DEA ++ ++ + S + + L + Sbjct: 422 LKLEQQALKKESDEASQKRLELLSTELDQKEREYSRQDEEWKAEKASLTGTQNIKASLEQ 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + E ++ D M +I L K + Sbjct: 482 AKISLEQARRQGDLGRMSELQYGKIPELEKQLAA 515 >gi|56708764|ref|YP_170660.1| ClpB protein [Francisella tularensis subsp. tularensis Schu 4] Length = 859 Score = 220 bits (562), Expect = 5e-56 Identities = 36/273 (13%), Positives = 82/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 248 GAKFRGDFEERLKSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGE 307 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K + + + FQ+ D P++E+ ++ E+ V Sbjct: 308 LKCVGATTLDEYREYVEKDPALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHGVNI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME K ++E L + Sbjct: 366 TDSAIVSAATLSHRYITDRQLPDKAID--LVD--EAASQIRMEIDSKPEKMESLYRRIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + + + + + D+A ++ + KL++ + ++ L + Sbjct: 422 LKMQREQLKKEKDDATKKRLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEK 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E Q D KM +I L ++ Sbjct: 482 AKFELEKYQRVGDLSKMAELQYGKIPELEAQIK 514 >gi|42631176|ref|ZP_00156714.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Haemophilus influenzae R2866] Length = 856 Score = 220 bits (561), Expect = 6e-56 Identities = 43/273 (15%), Positives = 82/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D PS+E+ ++ EI V Sbjct: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVFVDEPSVEDTIA--ILRGLKERYEIHHHVDI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME K ++ LE + Sbjct: 366 TDPAIVAAATLSHRYISDRQLPDKAID--LID--EAASSIRMEIDSKPEPLDRLERRIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E Q + DEA R+ + + LS ++ +Q L Sbjct: 422 LKLEQQALQKEEDEASRKRLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDT 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E ++ D KM I L K +E Sbjct: 482 AKTELEQARRAGDLAKMSELQYGRIPALEKQLE 514 >gi|76164358|gb|EAO58508.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chloroflexus aurantiacus J-10-fl] Length = 861 Score = 220 bits (561), Expect = 6e-56 Identities = 34/273 (12%), Positives = 84/273 (30%), Gaps = 19/273 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + + + +I +D + + ++ + + Sbjct: 251 GAKYRGEFEERLKAVLKEIQERDDIILFVDELHTVVGAGAAEGAMDAGNMLKPMLARGEL 310 Query: 277 ---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ D PS+E+ ++ E V+ T Sbjct: 311 HMVGATTLDEYRKHIEKDAALERRFQPVMVDPPSVEDTI--SILRGLKERYETHHGVRIT 368 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A L+ME ++++L+ + Sbjct: 369 DGALIAAAMLSDRYISDRFLPDKAID--LID--EAAARLRMEITSDPQELDDLKRRIMQL 424 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 + E + + + D+A +E ++ + R L ++ ++ + + Sbjct: 425 EIEREALRKEKDQASKERLEKLEQELANLREQRSALEAQIQRERQELERIQQLKEKIEQT 484 Query: 446 LKAQENSQCDFD--PMKMRMESEIRGLLKGMEM 476 A E +Q +D + L + ++ Sbjct: 485 RAAIEQAQRQYDYNKAAELQYGTLVSLERELQA 517 Score = 40.3 bits (93), Expect = 0.13 Identities = 21/210 (10%), Positives = 61/210 (29%), Gaps = 20/210 (9%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENGEGGFLIAPQDACNE 319 K DE +L+ ++ + + + + + + + + E Sbjct: 390 DKAIDLIDEAAARLRMEITSDPQELDDLKRRIMQLEIEREALRKEKDQASKERLEKLEQE 449 Query: 320 IAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQK----KKP 375 +A +++ +E ++ R L+ + E ++ +++ K Sbjct: 450 LA-NLREQRSALEA-------QIQRERQELERIQQLKEKIEQTRAAIEQAQRQYDYNKAA 501 Query: 376 QIE-----ELESIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL 430 +++ LE ++ +A+ + E + + KL Sbjct: 502 ELQYGTLVSLERELQAAEAQLGSQSRLLRQEVTETDIAEIISKWTGIPVTKLLEGELEKL 561 Query: 431 RLSEAEERRQY--LFEELKAQENSQCDFDP 458 E ++ E + A N+ Sbjct: 562 VHMEERLHQRVVGQDEAVIAVSNAVRRARA 591 >gi|33151758|ref|NP_873111.1| ATP-dependant Clp protease chain B [Haemophilus ducreyi 35000HP] Length = 856 Score = 220 bits (561), Expect = 6e-56 Identities = 40/272 (14%), Positives = 82/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 246 GAKYRGEFEERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGE 305 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D PS+E+ ++ EI VQ Sbjct: 306 LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIA--ILRGLKERYEIHHHVQI 363 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + L+ME K +++LE + Sbjct: 364 TDPAIVAAATLSHRYISDRQLPDKAID--LID--EAASSLRMEIDSKPEPLDKLERRIIQ 419 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + E Q + DEA R+ + + + + + L Sbjct: 420 LKLERQALQKEKDEASRQRLAKLDEEMTAKAQEYSALEEVWKAEKSALLGTQHLKTELEN 479 Query: 445 ELKAQENSQC--DFDPMKMRMESEIRGLLKGM 474 A + ++ +F+ M I L K + Sbjct: 480 ARIAMDQAKRADNFEKMSELQYGTIPALEKQL 511 >gi|13472967|ref|NP_104534.1| endopeptidase Clp ATP-binding chain B, clpB [Mesorhizobium loti MAFF303099] Length = 868 Score = 220 bits (561), Expect = 6e-56 Identities = 35/273 (12%), Positives = 85/273 (31%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 249 GAKYRGEFEERLKAVLSEVTSANGNIILFIDEMHTLVGAGKADGAMDASNLLKPALARGE 308 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ D P++E+ ++ E V+ Sbjct: 309 LHCVGATTLDEYRKHVEKDPALARRFQPVFVDEPTVEDT--VSILRGLKEKYEQHHKVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A + L+M+ K ++E++ + Sbjct: 367 SDSALVAAATLSNRYIADRFLPDKAID--LVD--EAASRLRMQVDSKPEALDEIDRRIMQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + +++ D+A ++ T+K+ K +L A + ++ L E Sbjct: 423 LKIEREALKVETDDASKDRLVRLEKELVGLEEESTEITAKWQAEKQKLGLAADLKKQLDE 482 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 +Q + + +I L K ++ Sbjct: 483 ARNELAIAQRKGEFQRAGELAYGKIPELEKKLK 515 >gi|50843466|ref|YP_056693.1| ATP-dependent protease (Clp chaperone) [Propionibacterium acnes KPA171202] Length = 857 Score = 220 bits (560), Expect = 9e-56 Identities = 38/269 (14%), Positives = 82/269 (30%), Gaps = 21/269 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 F + + + +I +D + + ++ + Sbjct: 248 GAKYRGEFEERLKAVLNEIKEAEGQIITFIDELHTVVGAGASGEGAMDAGNMLKPMLARG 307 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + ++I ++ + FQ+ PS+E+ ++ E V+ Sbjct: 308 ELRMIGATTLDEYREHIEKDPALERRFQQVFVGEPSVEDTIA--ILRGLRERYEAHHKVR 365 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R + A D L D A + L+ME +I+ L V Sbjct: 366 ITDGALVAAASLSHRYITARQLPDKAID--LID--EAASRLRMEIDSSPEEIDTLRREVD 421 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 + E + + D A ++ S++ + L++ E + + Sbjct: 422 RMKMEIFAVEKEDDPASQQRLTRLRADMADKEETLRGLESRWEAEKAGLNKVGELKTRID 481 Query: 444 EELKAQENSQCDFD--PMKMRMESEIRGL 470 E A + Q + D + +I GL Sbjct: 482 ELRTAADKYQREGDFGRASEILYGQIPGL 510 >gi|15159084|gb|AAK89256.1| AGR_L_1346p [Agrobacterium tumefaciens str. C58] Length = 887 Score = 219 bits (559), Expect = 1e-55 Identities = 35/274 (12%), Positives = 83/274 (30%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 262 GAKYRGEFEERLKAVLNEVQAENGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGE 321 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ D P++E+ ++ E V+ Sbjct: 322 LHCVGATTLDEYRKHVEKDPALARRFQPVLVDEPNVEDTI--SILRGLKEKYEQHHKVRI 379 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A + L+M+ K +++EL+ + Sbjct: 380 SDSALVAAATLSNRYITDRFLPDKAID--LMD--EAASRLRMQVDSKPEELDELDRRIIQ 435 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + + D++ + T+++ K +L A + ++ L E Sbjct: 436 LKIEREALKQETDQSSVDRLRKLEDELADTEEKADALTARWQAEKQKLGHAADLKKRLDE 495 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 +Q + + I GL K + Sbjct: 496 ARNELAIAQRNGQFQRAGELTYGIIPGLEKELAA 529 >gi|71908340|ref|YP_285927.1| AAA ATPase, central region:Clp, N terminal [Dechloromonas aromatica RCB] Length = 863 Score = 219 bits (558), Expect = 2e-55 Identities = 33/275 (12%), Positives = 80/275 (29%), Gaps = 22/275 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKAVLKEVAQDEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ + PS+E+ ++ E+ V Sbjct: 308 LHCIGATTLNEYRKYIEKDAALERRFQKVLVEEPSVESTIA--ILRGLQEKYELHHGVDI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A +KME K +++L+ + Sbjct: 366 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAAARIKMEIDSKPEVMDKLDRRIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E + + + DEA ++ + + ++ +E + Sbjct: 422 LKIEREAVKKEKDEASKKRFGLIEEEIAKLTKEYSDLEEVWKAEKSAVLGSAQIKEEIDH 481 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 L ++ + + ++ L ++ Sbjct: 482 LKADIARLQREGKLG-EVAELQYGKLPQLEAQLKA 515 >gi|75674787|ref|YP_317208.1| AAA ATPase [Nitrobacter winogradskyi Nb-255] Length = 891 Score = 219 bits (557), Expect = 2e-55 Identities = 35/272 (12%), Positives = 77/272 (28%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + + + + + Sbjct: 263 GAKYRGEFEERLKAVLQEVTSADGGIVLFIDEMHTLIGAGKADGAMDASNLLKPALARGE 322 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ P++E+ ++ E V+ Sbjct: 323 LHCVGATTLDEYRKHVEKDAALARRFQPIFVSEPTVEDT--VSILRGLKDKYEQHHGVRI 380 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A LKM+ K +++ L+ + Sbjct: 381 ADSALVAAATLSHRYITDRFLPDKAID--LVD--EAAARLKMQVDSKPEELDSLDREIVR 436 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + ++D R TS++ K +LS+A + L + Sbjct: 437 LKIEQEALKKESDAGSRTRLENLEKELADLEKRSADLTSRWNAEKNKLSDAARLKSELDQ 496 Query: 445 ELKAQENSQC--DFDPMKMRMESEIRGLLKGM 474 N+Q ++ I L K + Sbjct: 497 ARIELANAQRRGEYQIAGELAYGRIPELEKRL 528 >gi|50084451|ref|YP_045961.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1] Length = 859 Score = 218 bits (556), Expect = 2e-55 Identities = 34/273 (12%), Positives = 79/273 (28%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQH-CAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 245 GAKYRGEFEERLKAVLNDLAKQDGQVILFIDELHTLVGAGKSDGAMDAGNMLKPALARGE 304 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 305 LRCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVKI 362 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R + A D L D A + +KME K ++ LE + Sbjct: 363 LDSAIIAAAKMSHRYITDRQLPDKAID--LID--EAASRIKMELDSKPEALDRLERRIIQ 418 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFE 444 + + + + D + + + ++ + L + Sbjct: 419 LKMQLEAVKKDEDLGSKAEVKHLEEQISIVQKEYNDMEEVWRAEKALVEGTKDAQVKLDQ 478 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 A E +Q + D + I L K +E Sbjct: 479 ARIAFEKAQREGDLAEAARLQYGVIPELQKQLE 511 >gi|23335984|ref|ZP_00121214.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Bifidobacterium longum DJO10A] Length = 894 Score = 218 bits (555), Expect = 3e-55 Identities = 36/272 (13%), Positives = 78/272 (28%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 + F + + +I +D + I ++ + + Sbjct: 254 GSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGE 313 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 +LI ++ + FQ+ PS+E+ ++ E V Sbjct: 314 LRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIA--ILRGLKQRYEAHHKVTI 371 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R + A D L D A L+ME +I+EL+ V Sbjct: 372 GDDALVAAATLSNRYISGRQLPDKAID--LVD--EAAAHLRMELDSSPEEIDELQRKVTR 427 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFE 444 + E + D A +E +++ + + + R L + Sbjct: 428 LEMEEMQLKKAEDPASKERLGKLQAELADTREKLSGLKARWDAEQAGHNKVGDLRAKLDD 487 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + + + + + EI + K + Sbjct: 488 LRVQADKYTREGNLAEASKILYGEIPSIQKEL 519 >gi|22124822|ref|NP_668245.1| heat shock protein [Yersinia pestis KIM] Length = 864 Score = 218 bits (555), Expect = 3e-55 Identities = 33/274 (12%), Positives = 81/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++I +D + + + + + + Sbjct: 255 GAKYRGEFEERLKGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGE 314 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ P++E+ ++ E+ VQ Sbjct: 315 LHCVGATTLDEYRQYIEKDAALERRFQKVYVAEPTVEDTIA--ILRGLKERYELHHHVQI 372 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++M+ K ++ LE + Sbjct: 373 TDPAIVAAATLSHRYISDRQLPDKAID--LID--EAGSSIRMQMDSKPESLDRLERRIIQ 428 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFE 444 + E + ++D+A ++ ++ + S + + L + Sbjct: 429 LKLEQQALKKESDDASKKRLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQ 488 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E ++ D +M I L K + Sbjct: 489 AKITLEQARRVGDLARMSELQYGTIPELEKQLAA 522 >gi|32452329|emb|CAD59396.1| putative ClpB1 protein [Propionibacterium freudenreichii subsp. shermanii] Length = 729 Score = 218 bits (555), Expect = 3e-55 Identities = 39/276 (14%), Positives = 80/276 (28%), Gaps = 21/276 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + L+ + + Sbjct: 249 GAKYRGEFEERLKAVLNEIKSAEGQIITFIDELHTVVGAGASEGSMDASNMLKPLLARGE 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 +LI ++ + FQ+ PS+E+ ++ E V+ Sbjct: 309 LRLIGATTLDEYREHIEKDPALERRFQQVYVGEPSVEDTVA--ILRGLRERYEAHHKVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A+ R + A D L D A + L+ME +I+ L V Sbjct: 367 TDSALVAAAQLSHRYITGRQLPDKAID--LVD--EAASRLRMEIDSSPEEIDTLRRQVDR 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 E + + D + +++ + L++ E + + Sbjct: 423 LTMEQFAVEKEEDPGSKARLARINSDLADAKEQLRGLEARWAAEKEGLNKVGELKTRIDA 482 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM-EMT 477 + D D K + EI L K + E + Sbjct: 483 LRTEADKHTRDGDLAKASEILYGEIPELNKQLDEAS 518 >gi|58580960|ref|YP_199976.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae KACC10331] Length = 898 Score = 218 bits (555), Expect = 3e-55 Identities = 35/273 (12%), Positives = 86/273 (31%), Gaps = 22/273 (8%) Query: 217 HTSELFGFVKDVFQH-CAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 285 GAKFRGEFEERLKAVLSDLSKTEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGE 344 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ P++E+ ++ + V+ Sbjct: 345 LHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKERYAVHHGVEI 402 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME K +++ LE + Sbjct: 403 TDPAIVAAATLSNRYITDRQLPDKAID--LMD--EAASRIRMEIDSKPEELDRLERRLIQ 458 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-----EAEERRQY 441 + + +M + + D+A R+ + + + + +E+ ++ Sbjct: 459 LKIQREMLKKEKDDASRQRLADLESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIEH 518 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 EL+A + + D+ M + L K M Sbjct: 519 AKLELEAAQR-RQDYAKMSEIQYGVLPQLEKQM 550 >gi|56479246|ref|YP_160835.1| ClpB protein [Azoarcus sp. EbN1] Length = 860 Score = 218 bits (555), Expect = 3e-55 Identities = 35/275 (12%), Positives = 80/275 (29%), Gaps = 22/275 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKAVLKEIAQEEGRIIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D PS+E+ ++ E+ V Sbjct: 308 LHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVESTIA--ILRGLQEKYELHHGVDI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A +KME K +++LE + Sbjct: 366 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAAARIKMEIDSKPEVMDKLERRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQY 441 + E + + + DEA ++ + + +E + Sbjct: 422 LKIEQEAVKRETDEASQKRLVLIRDEIDKLEREYANLDEIWRSEKASVQGSQHIKEEIEA 481 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 L ++ + +D + ++ L ++ Sbjct: 482 LRTQMAEMQRKGQ-YDKLAELQYGKLPQLEAQLKA 515 >gi|3150046|gb|AAC16900.1| ClpB chaperone homolog [Lactococcus lactis subsp. cremoris] Length = 867 Score = 217 bits (553), Expect = 5e-55 Identities = 32/274 (11%), Positives = 79/274 (28%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 250 GAKYRGEFEERLKAVLNEVKKADGQIILFIDELHTIVGAGKTEGSMDAGNLLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 LI ++ + FQ+ P++E+ ++ EI V Sbjct: 310 LHLIGATTLDEYRKYMETDKALERRFQKVLVTEPTVEDTI--SILRGLKERFEIHHGVTI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D+A A +++E ++++ + Sbjct: 368 HDNALIAAATLSNRYITDRFLPDKAID--LIDEASA--TIRVEMNSLPTELDQANRRLMQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFE 444 + E + + D+A ++ +++ + E+R L Sbjct: 424 LEIEEAALKKERDDASKKRLEIIRGEIAELREENNQLKAQWEAEKKEVGNISEKRNELEH 483 Query: 445 ELKAQENSQCDF--DPMKMRMESEIRGLLKGMEM 476 E +Q + + +I + K ++ Sbjct: 484 ARHELEEAQNEGNLEKAAALRYGKIPEIEKELKA 517 >gi|46156241|ref|ZP_00133175.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Haemophilus somnus 2336] Length = 872 Score = 217 bits (553), Expect = 5e-55 Identities = 41/272 (15%), Positives = 80/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 264 GAKYRGEFEERLKAVLKELAQEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGE 323 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ P++E+ ++ EI VQ Sbjct: 324 LHCVGATTLDEYRQYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKERYEIHHHVQI 381 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME K ++ LE + Sbjct: 382 TDPAIVAAATLSHRYISDRQLPDKAID--LID--EAASSIRMEIDSKPQPLDRLERRIIQ 437 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E Q + DEA R+ + + LS A+ + L Sbjct: 438 LKLEQQALQKEDDEASRKRLDLLEEELGEKEREYAELEDVWKAEKAALSGAQHIKAELDN 497 Query: 445 ELKAQENSQC--DFDPMKMRMESEIRGLLKGM 474 E ++ DF M I L K + Sbjct: 498 AKIQMEQARRISDFAKMSELQYGRIPELEKQL 529 >gi|27360063|gb|AAO09001.1| ClpB protein [Vibrio vulnificus CMCP6] Length = 857 Score = 217 bits (553), Expect = 5e-55 Identities = 35/274 (12%), Positives = 82/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKSVLNELSKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHHVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++M+ K +++LE + Sbjct: 366 TDPAIVAAASLSHRYVSDRQLPDKAID--LID--EAASSIRMQIDSKPEALDKLERKIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + DEA + + + LS + + L + Sbjct: 422 LKIEQQALSNEHDEASEKRLRSLNEELNEKEREFAELEEIWNAEKAALSGTQHIKAALEQ 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E ++ D +M I L K +++ Sbjct: 482 ARMDMEFARRAGDLSRMSELQYGRIPELEKQLDL 515 >gi|23494457|dbj|BAC19423.1| putative endopeptidase Clp ATP-binding chain B [Corynebacterium efficiens YS-314] Length = 852 Score = 217 bits (552), Expect = 7e-55 Identities = 41/273 (15%), Positives = 84/273 (30%), Gaps = 21/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + ++ +D + I L+ + Sbjct: 249 GAKYRGEFEERLKAVLDEIKGANGEIVTFIDELHTIVGAGASGESAMDAGNMIKPLLARG 308 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + +L+ ++ + FQ+ PS+E+ G ++ E+ V+ Sbjct: 309 ELRLVGATTLNEYRKYIEKDTALERRFQQVYVGEPSVEDTVG--ILRGLKERYEVHHGVR 366 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + AE R A D L D A + L+ME +I+ELE IVR Sbjct: 367 IQDSALVAAAELSHRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPQEIDELERIVR 422 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 + E + D A RE +++ + + + + ++ L Sbjct: 423 RLEIEEVALTKETDVASRERLERLRSELADEREKLSELKARWQNEKAVIDDVRKFKEELE 482 Query: 444 EELKAQENSQCDFD--PMKMRMESEIRGLLKGM 474 + ++ + D + I L K + Sbjct: 483 ALRSESDIAEREGDYGRVAELRYGRIPELEKKI 515 >gi|52307890|gb|AAU38390.1| ClpA protein [Mannheimia succiniciproducens MBEL55E] Length = 856 Score = 217 bits (552), Expect = 7e-55 Identities = 38/274 (13%), Positives = 80/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKAVLKELAQEEGKVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ E+ VQ Sbjct: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVFVDEPTVEDTIA--ILRGLKERYELHHHVQI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME K ++ L+ + Sbjct: 366 TDPAIVAAATLSHRYISDRQLPDKAID--LID--EAASSIRMEIDSKPEPLDRLDRRIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + + DEA R+ + + LS + + L Sbjct: 422 LKLEQQALKKEEDEASRKRLDMLEKELSEKEREYAELEEVWKSEKAALSGTQHIKAELES 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E ++ D KM I L K + Sbjct: 482 ARTQMEQARRAGDLNKMSELQYGTIPALEKQLAA 515 >gi|56417033|ref|YP_154107.1| ATP-dependent clp protease ATP-binding subunit [Anaplasma marginale str. St. Maries] Length = 872 Score = 217 bits (552), Expect = 7e-55 Identities = 33/273 (12%), Positives = 83/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQ-HCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + +I +D + + ++ + + Sbjct: 249 GTKYRGEFEERLKAVITKIVASNGKIILFIDELHMLVGAGATGGSMDASNILKPVLARGE 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ P+ + ++ E+ ++ Sbjct: 309 IRCIGATTLDEYREHIEKDPALARRFQPVFVAEPTTGDTI--SILRGLKEKYELHHGIRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D A + ++E K I+ ++ + Sbjct: 367 TDSAIVAAATLSNRYITDRFLPDKAID--LID--EAASRARIEIDSKPEIIDSIDRRIMQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL--RLSEAEERRQYLFE 444 + E+++ + + +EA ++ SK+ ++S+ +E + L Sbjct: 423 LKIESEVLKNEKNEASQQRLAVINAELNELSSEAADLNSKWQAEKIKISKMQELTEKLDG 482 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E +Q + + M I L + ++ Sbjct: 483 ARIELEQAQRSGNLSRAGELMYGVIPSLEQELK 515 >gi|58698222|ref|ZP_00373142.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Wolbachia endosymbiont of Drosophila ananassae] Length = 866 Score = 217 bits (552), Expect = 8e-55 Identities = 41/273 (15%), Positives = 85/273 (31%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + +I +D + + + + + + Sbjct: 263 GTKFRGEFEERLKAVINEISRAEGKIILFIDELHTLVGAGATSGAMDASNLLKPALARGE 322 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ P+ + ++ E+ ++ Sbjct: 323 IRCIGATTLDEYRQHIEKDPALARRFQPVFISQPTETDTI--SILRGLKERYEVHHGIRI 380 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R S A D L D A + +++E K I+ELE V Sbjct: 381 TDGAIIAAATLSNRYITDRFSPDKAID--LID--EAASRVRIEMDSKPEVIDELERKVIQ 436 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + EA+ + ++DE ++ SK+ K +++ +E + L Sbjct: 437 LKIEAEALKKESDENSKQRLKKINEEIENLNSKFADLNSKWQMEKNKIARIQETAEKLDN 496 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 K E +Q + K M I L ++ Sbjct: 497 ARKELELAQRSGNLGKAGELMYGVIPQLENELK 529 >gi|74316833|ref|YP_314573.1| ClpB protein [Thiobacillus denitrificans ATCC 25259] Length = 859 Score = 216 bits (551), Expect = 9e-55 Identities = 39/272 (14%), Positives = 79/272 (29%), Gaps = 22/272 (8%) Query: 219 SELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSK 277 F + + D I LD + + + + + + Sbjct: 250 KYRGEFEERLKAVLKELAMDPGRYIVFLDEIHTLVGAGKAEGAIDAGNMLKPALARGELH 309 Query: 278 LIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTA 328 LI ++ + FQ+ D PS+E+ ++ E+ V T Sbjct: 310 LIGATTLDEYRKYIEKDAALERRFQKVMVDEPSVESTIA--ILRGLQERYELHHGVDITD 367 Query: 329 RKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQ 388 + AE R A D L D A +KME K +++L+ + + Sbjct: 368 PAIVAAAELSHRYITDRFLPDKAID--LID--EAAARIKMEIDSKPEVMDKLDRRIIQLK 423 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-----EAEERRQYLF 443 E + + + DEA ++ + + +E L Sbjct: 424 IEREAVKKETDEASKKRLGLLEDEIDKLGREYADLEEVWKSEKAQVQGSAHLKEEIDKLR 483 Query: 444 EELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 E+ + Q D + ++ L ++ Sbjct: 484 GEMADLQR-QGKLDKVAEIQYGKLPQLEAQLK 514 >gi|54310128|ref|YP_131148.1| putative clpB, ATPases with chaperone activity [Photobacterium profundum SS9] Length = 861 Score = 216 bits (551), Expect = 1e-54 Identities = 34/274 (12%), Positives = 83/274 (30%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + ++I +D + + + + + + Sbjct: 252 GAKYRGEFEERLKSVLNELSQEEGSVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGE 311 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 312 LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHHVEI 369 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++M+ K ++ LE + Sbjct: 370 TDPAIVAAARLSHRYVSDRQLPDKAID--LID--EAASSIRMQIDSKPESLDRLERRIIQ 425 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E ++D A ++ + + LS + + L + Sbjct: 426 LKIEQQALSKESDAASQKRLNDICEELDVKEREYAELEEVWNAEKAALSGTQHIKSELEQ 485 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 E ++ D M +I L K +++ Sbjct: 486 ARMNMEVARRAGDLNRMSELQYGKIPELEKQLDL 519 >gi|17864015|gb|AAL47016.1| ClpB ATP protease [Paracoccidioides brasiliensis] Length = 792 Score = 216 bits (550), Expect = 1e-54 Identities = 34/272 (12%), Positives = 81/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCA-PNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 178 GAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGE 237 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 238 LRCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVKI 295 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R + A D L D A + +KME K +++LE + Sbjct: 296 LDSAIIAAAKMSHRYITDRQLPDKAID--LID--EAASRIKMELDSKPEALDKLERRLIQ 351 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + + + + D R + + + ++ + L + Sbjct: 352 LKLQLEAVKKDEDAGSRAEVSHLEKQIEDVQKDYNDLEEVWKSEKTLVEGTKQIQAQLDQ 411 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 A + +Q + D +M I L K + Sbjct: 412 ARIALQKAQRENDLGEMSRLQYGVIPELEKQL 443 >gi|59711173|ref|YP_203949.1| ClpB protein [Vibrio fischeri ES114] Length = 861 Score = 216 bits (550), Expect = 1e-54 Identities = 36/274 (13%), Positives = 82/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + ++I +D V + + + + + Sbjct: 248 GAKFRGEFEERLKAVLNELAKEEGSVILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ EI V+ Sbjct: 308 LHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTVA--ILRGLKERYEIHHHVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME K +++L+ + Sbjct: 366 TDPAIVAAASLSHRYISDRQLPDKAID--LID--EAASSIRMEIDSKPESLDKLDRKIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E ++D+A + + + LS + + L Sbjct: 422 LKIEQQALVKESDDASLKRLDSLNLELMQKEREYAELEEVWKAEKAALSGTQHIKTELET 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 E ++ D M I L K +++ Sbjct: 482 ARSNMEIARRAGDLNRMSELQYGRIPELEKQLDL 515 >gi|23474967|ref|ZP_00130258.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Desulfovibrio desulfuricans G20] Length = 863 Score = 216 bits (550), Expect = 1e-54 Identities = 31/275 (11%), Positives = 80/275 (29%), Gaps = 20/275 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 253 GAKYRGEFEERLKAVLKEVEQAEGRIIMFIDELHTIVGAGKTDGAMDAGNLLKPMLARGE 312 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ D P++E+ ++ E+ V+ Sbjct: 313 LHCIGATTLDEYRKYIEKDPALERRFQPLVVDEPTVEDTI--SILRGLKERFEVHHGVRI 370 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + R + A D L D A ++ E +++E + Sbjct: 371 SDSALVEAVTLSNRYIADRQLPDKAID--LID--EAAALIRTEIDSLPAELDEANRKIMQ 426 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + + + D A RE +++ + + + ++ + Sbjct: 427 LEIEREALRRETDAASRERLQKLENELAELREVQAGLNTQWEREKGSIDSVRALKEDIER 486 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEMT 477 + E ++ ++D S + L K + T Sbjct: 487 TRRQIEEAERNYDLNRAAELKYSVLHDLEKRLAAT 521 >gi|37525237|ref|NP_928581.1| heat shock protein F84.1 [Photorhabdus luminescens subsp. laumondii TTO1] Length = 857 Score = 216 bits (550), Expect = 1e-54 Identities = 38/274 (13%), Positives = 82/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ PS+E+ ++ E+ VQ Sbjct: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVYVAEPSVEDTIA--ILRGLKERYELHHHVQI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D+A A L+M+ K ++ LE V Sbjct: 366 TDPAIVAAATLSHRYISDRMLPDKAID--LIDEAGA--SLRMQMDSKPEALDRLERRVIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFE 444 + E + ++D+A ++ ++ + + + + L Sbjct: 422 LKLEQQALKKESDDASKKRLEMLNEELLVKEREYSELEEEWKAEKAALTGTQHIKAELEN 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 + E ++ D KM +I GL K + Sbjct: 482 ARISLEQARRSGDLAKMSEIQYGKIPGLEKQLAA 515 >gi|29653454|ref|NP_819146.1| clpB protein [Coxiella burnetii RSA 493] Length = 859 Score = 215 bits (548), Expect = 2e-54 Identities = 35/274 (12%), Positives = 82/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 248 GAKFRGEFEERLKAVLKDIAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ + PS E+ ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRKYIEKDAALERRFQKVLVEEPSTEDAIA--ILRGLKERYEVHHGVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D A + ++ME K +++ LE + Sbjct: 366 TDPAIIAAATLSQRYITDRNLPDKAID--LID--EAASQIRMEMDSKPVELDRLERRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFE 444 + E + + + DEA ++ + + S ++ ++ L + Sbjct: 422 LKIEREALKKETDEASKKRLSDLETEIKNVEKEYSDLEEVWKSEKASLHGTQQIKEELEQ 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E + D +M I L K ++ Sbjct: 482 ARIELEAAGRAGDLARMSELQYGIIPELDKKLKA 515 >gi|48861360|ref|ZP_00315262.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Microbulbifer degradans 2-40] Length = 876 Score = 215 bits (548), Expect = 2e-54 Identities = 34/275 (12%), Positives = 79/275 (28%), Gaps = 22/275 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 248 GAKFRGEFEERLKAVLNELSKQEGRIILFVDELHTMVGAGKADGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P+ E+ ++ E+ V Sbjct: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVQVDEPNEEDTIA--ILRGLKERYEVHHGVNI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A+ R + A D L D + + ++ME K ++++LE + Sbjct: 366 TDSAIIAAAKLSQRYITDRQLPDKAID--LID--ESASRIRMEIDSKPEEMDKLERRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQY 441 + E + + D A +E + + E + + Sbjct: 422 LKIEREAVKKDEDIASKERLKKIDSQINEIEKSFADLDEIWRAEKAALQGSQEIKSHLEK 481 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 +L+A + M I L K ++M Sbjct: 482 ARLDLEAARRAGDLGR-MSELQYGIIPDLEKQLDM 515 >gi|68262865|emb|CAI36353.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Corynebacterium jeikeium K411] Length = 873 Score = 215 bits (548), Expect = 2e-54 Identities = 37/273 (13%), Positives = 85/273 (31%), Gaps = 21/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + + ++ +D + I L+ + Sbjct: 249 GAKYRGEFEERLKAVLDEIKEAEGEVVTFIDELHTIVGAGAGGDSAMDAGNMIKPLLARG 308 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + +L+ ++ + FQ+ P+ E+ G ++ E+ V+ Sbjct: 309 ELRLVGATTLDEYRKYIEKDAALERRFQQVYVGEPTAEDTIG--ILRGLKERYEVHHGVR 366 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R A D L D A + L+ME + +I+ +E +VR Sbjct: 367 IQDSALVAAATLSDRYITSRFLPDKAID--LVD--EAASRLRMEIDSRPEEIDNVERVVR 422 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 + E + + D A ++ T+++ + + E ++ L Sbjct: 423 RLEIEEMALEKETDAASKDRLERLRSELADEKEKLAGLTARWENEKGSIDSLRELKEELD 482 Query: 444 EELKAQENSQCDFDPMK--MRMESEIRGLLKGM 474 + E ++ + D K I + K + Sbjct: 483 NLRRESEIAEREGDFAKVAELRYGHIPDVEKKL 515 >gi|68189537|gb|EAN04203.1| AAA ATPase, central region:Clp, N terminal [Mesorhizobium sp. BNC1] Length = 891 Score = 215 bits (548), Expect = 2e-54 Identities = 37/273 (13%), Positives = 85/273 (31%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 272 GAKYRGEFEERLKAVLSEIQAAAGGVILFIDEMHTLVGAGKADGAMDASNLLKPALARGE 331 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ + PS+E+ ++ E V+ Sbjct: 332 LHCVGATTLDEYRKYVEKDAALARRFQPVYVNEPSVEDTI--SILRGLKEKYEQHHKVRV 389 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A + L+M+ K +++E++ + Sbjct: 390 SDSALVAAANLSNRYITDRFLPDKAID--LVD--EAASRLRMQVDSKPEELDEVDRRIMQ 445 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + +++ DEA ++ T+K+ K +L A E ++ L E Sbjct: 446 LKIEREALRVEKDEASKDRLERLERELAELEEQSANITAKWQAEKQKLGLAAELKKQLDE 505 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 +Q + + I L K ++ Sbjct: 506 ARNDLAIAQRKGEFQRAGELAYGRIPELEKKLK 538 >gi|47573811|ref|ZP_00243848.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rubrivivax gelatinosus PM1] Length = 867 Score = 215 bits (547), Expect = 3e-54 Identities = 34/274 (12%), Positives = 79/274 (28%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D I +D + + + + + + Sbjct: 247 GAKYRGEFEERLKSVLKEVAQDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGE 306 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ+ PS+E ++ E+ V+ Sbjct: 307 LHCIGATTLDEYRKYVEKDAALERRFQKVLVGEPSVEATIA--ILRGLQEKYEVHHGVEI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A +K+E K ++ L+ + Sbjct: 365 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAAAKVKIEIDSKPEVMDRLDRRLIQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQY 441 + E + + + DEA ++ + + + +E Sbjct: 421 LKIEREAVRKEKDEASQKRFGLIEEDIAKLEREAADLDEVWKAEKATAQGSAHLKEDIDR 480 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + +++ + DF+ + ++ L K ++ Sbjct: 481 IRTQIEEFKRKG-DFNKVAELQYGKLPELEKKLK 513 >gi|37523146|ref|NP_926523.1| endopeptidase Clp ATP-binding chain B [Gloeobacter violaceus PCC 7421] Length = 872 Score = 215 bits (547), Expect = 3e-54 Identities = 31/274 (11%), Positives = 85/274 (31%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 + F + + ++ +D + + ++ + + Sbjct: 251 GSKYRGEFEERLKAVLNEVTKSEGQIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGE 310 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 311 LRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPTVEDTI--SILRGLKERYEVHHGVRI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A LKME K ++E++ + Sbjct: 369 SDSALVAAAVLSHRYISDRFLPDKAID--LMD--EAAAKLKMEITSKPEALDEVDRKILQ 424 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E ++D A R+ +++ + + + + ++ + + Sbjct: 425 LEMERLSLAKESDAASRDRLERLEKELADLKEEQRSLNAQWQAEKDIIDQVQAVKEEIDQ 484 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + ++ D+D ++ L K ++ Sbjct: 485 VNVQIQQAERDYDLNRAAELKYGKLSELQKRLDA 518 >gi|69300937|ref|ZP_00622398.1| AAA ATPase, central region:Clp, N terminal [Silicibacter sp. TM1040] Length = 902 Score = 215 bits (547), Expect = 3e-54 Identities = 38/272 (13%), Positives = 81/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + + + + + Sbjct: 278 GAKYRGEFEERLKGILNEVTDAAGEIILFIDEMHTLVGAGKSDGAMDAANLIKPALARGE 337 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ P++E+ ++ E+ V+ Sbjct: 338 LHCIGATTLDEYRKYVEKDAALARRFQPVMVTEPTVEDTI--SILRGIKEKYELHHGVRI 395 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A + L+ME K +++ L+ + Sbjct: 396 ADAALVSAATLSNRYITDRFLPDKAID--LMD--EAASRLRMEVDSKPEELDALDRQILQ 451 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFE 444 Q E + +L+ D A ++ T+++ R A R ++ L Sbjct: 452 MQIEEEALKLEDDAASKDRLEHLQKELADLQERSREMTAQWQSERDKLASARDLKEQLDR 511 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + ++ + + K I GL K + Sbjct: 512 ARAELDIAKREGNLAKAGELSYGVIPGLEKQL 543 >gi|6458777|gb|AAF10620.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Deinococcus radiodurans] Length = 875 Score = 214 bits (546), Expect = 3e-54 Identities = 38/270 (14%), Positives = 79/270 (29%), Gaps = 19/270 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + + + + Sbjct: 263 GAKFRGEFEERLKGVIDEVVKSAGEIILFVDEIHTIVGAGKTEGSPDAGNMLKPALARGE 322 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 LI ++ + FQ D PS+E+ ++ ++ V+ T Sbjct: 323 LHLIGATTLDEYREIEKDAALERRFQPVFVDEPSVEDTI--SILRGIKERYQVHHNVEIT 380 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R + A D L D + L+M + +I++L Sbjct: 381 DPALVAAATLSNRYITDRQLPDKAID--LID--ESAARLRMALESSPERIDQLSRRKLQL 436 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEE 445 + E + + + D + S++ R A E+R+ L Sbjct: 437 EIEREALKREKDVDSQNRLLDIENQLKTLTDELNEVRSRWEAERGEVAALREKREKLDAV 496 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKG 473 E ++ D+D + E+ L K Sbjct: 497 RTQIEKARRDYDLEEAARLEYGELPALEKD 526 Score = 37.6 bits (86), Expect = 0.67 Identities = 18/162 (11%), Positives = 46/162 (28%), Gaps = 13/162 (8%) Query: 255 SEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENG-------EG 307 ++ K DE +L+ L + + + + + + +L+ Sbjct: 396 TDRQLPDKAIDLIDESAARLRMALESSPERIDQLSRRKLQLEIEREALKREKDVDSQNRL 455 Query: 308 GFLIAPQD----ACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAV 363 + NE+ + + EK R+ ++ R+ D A Sbjct: 456 LDIENQLKTLTDELNEVRSRWEAERGE-VAALREKREKLDAVRTQIEKARRDY-DLEEAA 513 Query: 364 TDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 E + +++LE ++ + + A Sbjct: 514 RLEYGELPALEKDVQDLEKKLKSAEFAHMEVTEEDIAAVVSR 555 >gi|38234653|ref|NP_940420.1| Putative ATP-dependent protease regulatory subunit, ClpB [Corynebacterium diphtheriae NCTC 13129] Length = 849 Score = 214 bits (546), Expect = 4e-54 Identities = 43/273 (15%), Positives = 82/273 (30%), Gaps = 23/273 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + +I +D + I L+ + Sbjct: 249 GAKYRGEFEERLKAVLDEIKSAEGEIITFIDELHTIVGAGATGDSAMDAGNMIKPLLARG 308 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + +L+ ++ + FQ+ PS+E+ ++ E+ V+ Sbjct: 309 ELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVED--AVGILRGLKERYEVHHGVR 366 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R A D L D A + L+ME +I+ELE IVR Sbjct: 367 IQDSALVAAATLSDRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPQEIDELERIVR 422 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQ 440 + E + D A ++ +++ ++ EA+E + Sbjct: 423 RLEIEEVALSKETDAASKDRLIKLRQELADEREKLGELVARWNNEKGAINKVREAKEELE 482 Query: 441 YLFEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 L E + E D+ + I L K Sbjct: 483 RLRSESEIAERDG-DYGKVAELRYGRIPELEKQ 514 >gi|69935649|ref|ZP_00630585.1| AAA ATPase, central region:Clp, N terminal [Paracoccus denitrificans PD1222] Length = 875 Score = 214 bits (546), Expect = 4e-54 Identities = 31/275 (11%), Positives = 82/275 (29%), Gaps = 20/275 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + + + + + Sbjct: 248 GAKYRGEFEERLKSVLKEIENAAGEIVLFIDELHVLVGAGKTDGAMDAANLIKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ + P++E+ ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRKYIEKDAALARRFQPVMIEEPTVEDTI--SILRGIKEKYELHHGVRI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A + L+ME K +++ L+ + Sbjct: 366 SDAALVAAATLSHRYITDRFLPDKAID--LMD--EAASRLRMEVDSKPEELDALDRQILQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 Q EA+ + + D A ++ T+++ R ++ L Sbjct: 422 MQIEAEALKKEDDAASQDRLEKLEKQLSELQEKSATMTARWQAERDKLEGSRNLKEQLDR 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEMT 477 + ++ + + + I GL + + + Sbjct: 482 ARAELDQAKREGNLARAGELSYGIIPGLERQLAES 516 >gi|33602268|ref|NP_889828.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica RB50] Length = 865 Score = 214 bits (546), Expect = 4e-54 Identities = 34/273 (12%), Positives = 77/273 (28%), Gaps = 22/273 (8%) Query: 219 SELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSK 277 F + + D I +D + + + + + + Sbjct: 249 KFRGEFEERLKAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELH 308 Query: 278 LIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTA 328 I ++ + FQ+ P +E+ ++ E+ V+ T Sbjct: 309 CIGATTLDEYRKYIEKDAALERRFQKVLVGEPDVESTIA--ILRGLQERYELHHGVEITD 366 Query: 329 RKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQ 388 + AE R A D L D+A A ++ME K ++ L+ + + Sbjct: 367 PAIVAAAELSHRYITDRFLPDKAID--LIDEAGA--RIRMEIDSKPEVMDRLDRRIIQLK 422 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQYLF 443 E + + + D+A Y + + +E + Sbjct: 423 IEREAVKKETDDASMRRLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVR 482 Query: 444 EELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 E+ + FD + ++ L ++ Sbjct: 483 AEMAELQRKGQ-FDKLAELQYGKLPELEARLKA 514 >gi|17428350|emb|CAD15037.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Ralstonia solanacearum] Length = 862 Score = 214 bits (545), Expect = 4e-54 Identities = 34/275 (12%), Positives = 77/275 (28%), Gaps = 22/275 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + I +D + + + + + + Sbjct: 247 GAKYRGEFEERLKAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGE 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D PS+E ++ E+ V+ Sbjct: 307 LHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVEI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A +KME K +++L+ + Sbjct: 365 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAAARIKMEIDSKPEAMDKLDRRLIQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E + + + DEA ++ + + + +E Sbjct: 421 LKIEREAVKKETDEASQKRLELIEQEIERLQKEYADLEEIWKAEKGAAQGAAAVKEEIDR 480 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + E+ + D + + L ++ Sbjct: 481 VKLEIARLQREGK-LDKVAELQYGRLPELEGKLKA 514 >gi|68213889|ref|ZP_00565718.1| AAA ATPase, central region:Clp, N terminal [Methylobacillus flagellatus KT] Length = 861 Score = 214 bits (545), Expect = 5e-54 Identities = 33/274 (12%), Positives = 78/274 (28%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D I +D + + + + + + Sbjct: 248 GAKYRGEFEERLQAVLKELAQDEGKTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D PS+E ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIA--ILRGLQEKYEVHHGVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A +KME K +++LE + Sbjct: 366 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAAARIKMEIDSKPEALDKLERRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-----EAEERRQY 441 + E + + DEA ++ + + +E + Sbjct: 422 LKIEREAVHREKDEASQKRLSLIEDEIRRLEKEYADLEEIWKAEKAQVQGSKHLKEEIEK 481 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + +++ ++ + ++ L ++ Sbjct: 482 VKLQIEEATRKG-EWQKVSELQYGKLPQLETQLK 514 >gi|16125131|ref|NP_419695.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Caulobacter crescentus CB15] Length = 859 Score = 214 bits (544), Expect = 5e-54 Identities = 33/272 (12%), Positives = 82/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKAVLGEVTAAEGSIILFIDEMHTLVGAGKGDGAMDASNLLKPALARGE 307 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ P++E+ ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDT--VSILRGLKEKYEVHHGVRI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A + ++M+ K +++E++ + Sbjct: 366 SDSAIVAAATLSNRYIADRFLPDKAID--LVD--EASSRVRMQIDSKPEELDEIDRRLVQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + D A ++ T+++ K ++ A + R+ L Sbjct: 422 LKIEREALSKETDAASKQRLENLEVEIDDLQFRSDEMTARWKAEKEKVGGAAQAREALDR 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 N+Q D + EI L + + Sbjct: 482 LRADLANAQRAGDFARAGQIQYGEIPALERRL 513 >gi|75853631|ref|ZP_00761428.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Vibrio sp. Ex25] Length = 857 Score = 214 bits (544), Expect = 5e-54 Identities = 35/274 (12%), Positives = 81/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTVA--ILRGLKERYELHHHVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++++ K +++LE + Sbjct: 366 TDPAIVAAASLSHRYVSDRQLPDKAID--LID--EAASSIRLQIDSKPESLDKLERKIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + DEA + + K LS + + L + Sbjct: 422 LKIEQQALSNEHDEASEKRLKALNEELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQ 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 E ++ D M I L K +++ Sbjct: 482 ARMDMEFARRAGDLNRMSELQYGRIPELEKQLDL 515 >gi|72384775|gb|AAZ67679.1| chaperone putative [Haemophilus parasuis] Length = 686 Score = 214 bits (544), Expect = 5e-54 Identities = 38/272 (13%), Positives = 82/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 246 GAKYRGEFEERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGE 305 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ EI VQ Sbjct: 306 LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIA--ILRGLKERYEIHHHVQI 363 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + L+ME K +++LE + Sbjct: 364 TDPAIVAAATLSHRYISDRQLPDKAID--LID--EAASSLRMEIDSKPEPLDKLERRIIQ 419 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + E Q + DEA R+ + + + + + L Sbjct: 420 LKLERQALQKEEDEASRQRLAKLDEDLTAREREYAELEEVWKAEKSALLGTQHIKTELEN 479 Query: 445 ELKAQENSQCD--FDPMKMRMESEIRGLLKGM 474 + ++ + F+ M +I L K + Sbjct: 480 ARIEMDQARRENNFEKMSELQYGKIPALEKQL 511 >gi|66043993|ref|YP_233834.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Pseudomonas syringae pv. syringae B728a] Length = 854 Score = 214 bits (544), Expect = 6e-54 Identities = 36/274 (13%), Positives = 80/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D PS E+ ++ E+ V Sbjct: 308 LHCVGATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDTIA--ILRGLKERYEVHHKVAI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A+ R + A D L D A + ++ME K ++ LE + Sbjct: 366 TDGAIIAAAKLSHRYITDRQLPDKAID--LID--EAASRIRMEIDSKPEVLDRLERRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + EA + + DEA + + + + +Q + + Sbjct: 422 LKVEAQALKKEKDEAAIKRLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQ 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + E ++ D M I L + ++M Sbjct: 482 SRQELEAARRRGDLNRMAELQYGIIPDLERSLQM 515 >gi|68209271|ref|ZP_00561312.1| AAA ATPase, central region:Clp, N terminal [Desulfitobacterium hafniense DCB-2] Length = 853 Score = 214 bits (544), Expect = 6e-54 Identities = 32/273 (11%), Positives = 80/273 (29%), Gaps = 19/273 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + + E +I +D + + ++ + + Sbjct: 240 GAKYRGEFEERLKAVLKEVQEREDIILFIDELHTVVGAGAAEGAMDAGNMLKPMLARGEL 299 Query: 277 ---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ +PS+E+ ++ E V+ T Sbjct: 300 HMVGATTLDEYRKYIEKDAALERRFQPVTVGAPSVEDTI--SILRGLKERYETHHGVRIT 357 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A ++ME ++++++ + Sbjct: 358 DGAIIAAAVLSDRYISDRFLPDKAID--LID--EAAARMRMEITSDPYELDQIKRRILQL 413 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 + E + + + DE +E ++ R L+ ++ + + Sbjct: 414 EIEREALKKEKDEGSKERLEKIEEDLANLKEERSALEAQLQGEREVLTRINSLKEDIDQN 473 Query: 446 LKAQENSQC--DFDPMKMRMESEIRGLLKGMEM 476 E +Q D++ + L K + Sbjct: 474 RLKMEQAQQAFDYNKAAELQYGILPKLEKELNA 506 >gi|53802726|ref|YP_115493.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Methylococcus capsulatus str. Bath] Length = 859 Score = 214 bits (544), Expect = 7e-54 Identities = 38/272 (13%), Positives = 83/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 248 GAKFRGEFEERLKGVLNDIAKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D P++E+ ++ E+ V Sbjct: 308 LHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPTVEDTIA--ILRGLKERYEVHHGVTI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME K +++ L+ + Sbjct: 366 TDPAIVAAATLSHRYITDRQLPDKAID--LVD--EAASRIRMEIDSKPEEMDRLDRRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + + DEA ++ + K RLS A ++ L + Sbjct: 422 LRIEREALKKETDEASKKRLEALEGEIGKLEKEYADLEEIWKSEKARLSGAASIKEELEK 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 +N++ D + I L K + Sbjct: 482 ARLDLDNAKRSGDLTRAGQIQYERIPALEKRL 513 >gi|28199560|ref|NP_779874.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1] Length = 861 Score = 214 bits (544), Expect = 7e-54 Identities = 34/272 (12%), Positives = 83/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 248 GAKFRGEFEERLKGVLNDLAKNEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ P++E+ ++ + V+ Sbjct: 308 LHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKEKYALHHGVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME K +++ LE + Sbjct: 366 TDPAIVAAATLSNRYITDRQLPDKAID--LMD--EAASRIRMEIDSKPEELDRLERRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + + +M + + DEA ++ + + L A + ++ + + Sbjct: 422 LKIQREMLKKEKDEASKQRLVDLERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQ 481 Query: 445 ELKAQENSQC--DFDPMKMRMESEIRGLLKGM 474 E +Q D+ M + L K + Sbjct: 482 AKLDLEAAQRRQDYAKMSEIQYGVLPALEKQL 513 >gi|66870845|gb|EAL98209.1| AAA ATPase, central region:Clp, N terminal [Arthrobacter sp. FB24] Length = 889 Score = 213 bits (543), Expect = 7e-54 Identities = 37/273 (13%), Positives = 78/273 (28%), Gaps = 21/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + ++ +D + + ++ + Sbjct: 248 GAKYRGEFEERLKAVLEEIKSSEGQIVTFIDELHTVVGAGASGDSSMDAGNMLKPMLARG 307 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + +LI ++ + FQ+ PS+E+ G ++ E V Sbjct: 308 ELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIG--ILRGLKERYEAHHKVS 365 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R + A D L D A + L+ME +I++L V Sbjct: 366 IADSALVAAATLSNRYISGRQLPDKAID--LVD--EAASRLRMEIDSAPEEIDQLRRQVD 421 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 E + D A E +++ + L+ + + + Sbjct: 422 RLTMEELALANEKDAASVERLAALRADMADKKEALSALNARWEAEKAGLNHVGDLKARID 481 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 E A E Q + D + E+ L + + Sbjct: 482 ELRSAAEKYQREGDLAAASRILYGELPALEREL 514 >gi|12722113|gb|AAK03788.1| ClpB [Pasteurella multocida subsp. multocida str. Pm70] Length = 855 Score = 213 bits (543), Expect = 8e-54 Identities = 39/272 (14%), Positives = 79/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 247 GAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGE 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ P++E+ ++ EI VQ Sbjct: 307 LHCVGATTLDEYRQYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKERYEIHHHVQI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME K ++ LE + Sbjct: 365 TDPAIVAAATLSHRYVSDRQLPDKAID--LID--EAASSIRMEIDSKPQPLDRLERRIIQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E Q + D+A R+ + + LS + + L Sbjct: 421 LKLEQQALQKEDDDASRKRLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDS 480 Query: 445 ELKAQENSQC--DFDPMKMRMESEIRGLLKGM 474 E ++ DF M I L K + Sbjct: 481 AKTQMEQARRASDFAKMSELQYGVIPALEKQL 512 >gi|15023863|gb|AAK78935.1| ATPase with chaperone activity, two ATP-binding domains [Clostridium acetobutylicum ATCC 824] Length = 865 Score = 213 bits (543), Expect = 8e-54 Identities = 39/273 (14%), Positives = 85/273 (31%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 252 GAKYRGEFEERLKAVLKEVERSEGKIILFIDEIHTIVGAGKTEGAMDAGNIIKPMLARGE 311 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D P++++ ++ EI V+ Sbjct: 312 LHCIGATTFDEYRKYIEKDKALERRFQKVQIDEPTVDD--AISILRGLKERFEIHHGVRI 369 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R A D L D+A A ++ME +++ L+ + Sbjct: 370 HDNAIVAAAKLSDRYITGRFLPDKAID--LIDEAGA--MVRMEIDSMPTELDMLKRKIFQ 425 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFE 444 + E + ++D+ RE T+KY K + +E + L E Sbjct: 426 MEIEKEALSKESDKFSRERLESIQKELSDLKDKDKAMTAKYDKEKAQIQGIKELKTKLDE 485 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 E ++ ++D E+ L +E Sbjct: 486 IRGQIEKAEREYDLNKAAELKYGEVPKLEHEIE 518 >gi|26987361|ref|NP_742786.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas putida KT2440] Length = 854 Score = 213 bits (542), Expect = 9e-54 Identities = 33/274 (12%), Positives = 81/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ + PS E+ ++ E+ V Sbjct: 308 LHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIA--ILRGLKERYEVHHKVAI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A+ R + A D L D A + ++ME K ++ L+ + Sbjct: 366 TDGAIIAAAKLSHRYITDRQLPDKAID--LID--EAASRIRMEIDSKPEVLDRLDRRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + E+ + + DEA ++ + + + +Q + + Sbjct: 422 LKVESQALKKEEDEAAKKRLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQ 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + E ++ D M I L + ++M Sbjct: 482 SRQELEAARRKGDLNRMAELQYGVIPDLERSLQM 515 >gi|58039904|ref|YP_191868.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Gluconobacter oxydans 621H] Length = 866 Score = 213 bits (542), Expect = 1e-53 Identities = 31/272 (11%), Positives = 74/272 (27%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + Sbjct: 249 GAKYRGEFEERLKAVLKEIETAEGEIILFIDEMHTLVGAGRSDGAMDASNLIKPELARGT 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ PS+ + ++ E+ V+ Sbjct: 309 LHCVGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTI--SILRGIKEKYELHHGVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D A + L+M+ K ++EL+ + Sbjct: 367 TDNAIVAAATLSNRYITDRFLPDKAID--LID--EAASRLRMQIDSKPEALDELDRRIIQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLFE 444 + E + + + D A ++ +++ + ++ ++ L Sbjct: 423 LKIEREAIRKEDDTASKDRLVALEAELADLEEQSDAMGAEWHAEKDRVNAIQKLKEQLDT 482 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGM 474 E +Q + M I L + Sbjct: 483 ARSDVEVAQRQGNLGKASELMYGLIPNLEAQI 514 >gi|68180177|ref|ZP_00553160.1| AAA ATPase, central region:Clp, N terminal [Jannaschia sp. CCS1] Length = 871 Score = 213 bits (542), Expect = 1e-53 Identities = 36/274 (13%), Positives = 84/274 (30%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKAVLTEIADAAGEIILFIDEMHTLVGAGKADGAMDAANLIKPALARGE 307 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ + P++++ ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRKYVEKDAALARRFQPLVVEEPTVDDT--VSILRGIKEKYELHHGVRI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + + R A D L D A + L+ME K +++ L+ + Sbjct: 366 SDSALVAASNLSHRYITDRFLPDKAID--LMD--EAASRLRMEVDSKPEELDALDRQILQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFE 444 Q EA+ + ++D A ++ T+K+ R R ++ L Sbjct: 422 MQIEAEALKQESDTASKDRLETLEKDLGDLQQQSAEMTAKWQAERDKLESARGLKERLDH 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 + ++ + D K I L K +E+ Sbjct: 482 ARAELDQAKRNGDLGKAGELSYGVIPQLEKELEV 515 >gi|75429872|ref|ZP_00732490.1| ATPases with chaperone activity, ATP-binding subunit [Actinobacillus succinogenes 130Z] Length = 636 Score = 213 bits (542), Expect = 1e-53 Identities = 33/273 (12%), Positives = 79/273 (28%), Gaps = 22/273 (8%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + ++I +D + + + + + + Sbjct: 28 GAKYRGEFEERLKAVLKELAQEEGSVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGE 87 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ PS+E+ ++ E+ V+ Sbjct: 88 LHCVGATTLDEYRQYIEKDAALERRFQKVFVGEPSVEDTIA--ILRGLQERYELHHHVEI 145 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++ME K +++LE + Sbjct: 146 TDPAIVAAATLSHRYISDRQLPDKAID--LID--EAASSIRMEIDSKPLPLDKLERRIIQ 201 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQY 441 + E + + DEA R+ + + + + Sbjct: 202 LKLEQQALKKEDDEASRKRLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELEN 261 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 +++ + D + M I L K + Sbjct: 262 ARTQMEQARRAG-DLNKMSELQYGTIPALEKQL 293 >gi|71281252|ref|YP_270571.1| ATP-dependent chaperone protein ClpB [Colwellia psychrerythraea 34H] Length = 861 Score = 212 bits (541), Expect = 1e-53 Identities = 32/274 (11%), Positives = 79/274 (28%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + Sbjct: 248 GAKYRGEFEERLKAVLNELSKEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGD 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ + PS+E+ ++ E+ V Sbjct: 308 LHCVGATTLDEYRKYIEKDAALERRFQKVLVEEPSVEDTIA--ILRGLKERYELHHSVNI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++++ K ++ LE + Sbjct: 366 TDPAIVAAATLSHRYISDRQLPDKAID--LID--EAASSIRLQMDSKPEDLDRLERRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFE 444 + E + DEA + + + + A ++ L + Sbjct: 422 LKLEQRALEKDEDEATIKRLAIISQQISEKQKKYDELDEVWTTEKAALYGAHTIKEELEQ 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 E ++ D M ++ L K +++ Sbjct: 482 ARIELEAARRTGDLNRMSELQYGKLPELEKQLDL 515 >gi|42544975|gb|EAA67818.1| conserved hypothetical protein [Gibberella zeae PH-1] Length = 776 Score = 212 bits (541), Expect = 1e-53 Identities = 38/272 (13%), Positives = 84/272 (30%), Gaps = 19/272 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 150 GAKFRGDFEERLKKVLTEVEQAEGEVILFIDELHTLLGLGKAEGSIDASNLLKPALARGE 209 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ PS+E+ ++ E+ V+ T Sbjct: 210 LQCCGATTLNEYRQIEKDVALARRFQPIIVSEPSVEDTI--SILRGIKDKYEVHHGVRIT 267 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + LK++ + K I L+ + Sbjct: 268 DGALVAAATLSNRYITDRFLPDKAID--LMD--EAASHLKLQHESKPEDIMRLDHKIMTI 323 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFEEL 446 Q E + + ++D A +E +++ K R E+ ++ Q ++ Sbjct: 324 QIELESLRKESDVASKERREKLENDLKKLNEEISGLNARWEKERAEIESVKKIQEDLDKA 383 Query: 447 K-AQENSQCDFD--PMKMRMESEIRGLLKGME 475 K A E +Q + + I L + + Sbjct: 384 KFALEQAQREGNFGRASELRFGVIPDLEQKLP 415 >gi|56679839|gb|AAV96505.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Silicibacter pomeroyi DSS-3] Length = 872 Score = 212 bits (540), Expect = 2e-53 Identities = 34/273 (12%), Positives = 82/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKAVLTEVTEAAGEIILFIDEMHTLVGAGKSDGAMDAANLIKPALARGE 307 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ + P++E+ ++ E+ V Sbjct: 308 LHCIGATTLDEYRKYVEKDAALARRFQPVLVEEPTVEDTI--SILRGIKEKYELHHGVDI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A + L+ME K +++L+ + Sbjct: 366 SDSALVAAATLSHRYITDRFLPDKAID--LMD--EAASRLRMEVDSKPEALDQLDRQILQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYL--KLRLSEAEERRQYLFE 444 Q E + + + D A ++ T+++ + +++ A+ ++ L Sbjct: 422 LQIEEEALKKENDAASQDRLATLQKDLAELQEKSAEMTAQWQASRDKMNAAQSVKEQLER 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E ++ + + + I L K E Sbjct: 482 ARAELEIAKREGNLARAGELSYGIIPELEKQRE 514 Score = 38.0 bits (87), Expect = 0.53 Identities = 22/194 (11%), Positives = 52/194 (26%), Gaps = 21/194 (10%) Query: 216 NHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 + + + +LD + E+A K+ + + + L+ Sbjct: 389 KAIDLMDEAASRLRM---EVDSKPEALDQLDRQILQLQIEEEALKKENDAASQDRLATLQ 445 Query: 276 SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVA 335 L + + + +Q S + + Q + + Sbjct: 446 KDLAELQEKSAEMTAQWQ------ASRDKMNAAQSVKEQLERARAELEIAKREGNLARAG 499 Query: 336 EEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESI------VRLKQA 389 E + + + E +A T LK E + QI + ++ + Sbjct: 500 ELSYGIIPELEKQRE------EAEAGEDTGLKAEEVVRPEQIAAVVERWTGIPTSKMLEG 553 Query: 390 EADMFQLKADEARR 403 E + DE + Sbjct: 554 EREKLLRMEDELHK 567 >gi|56460289|ref|YP_155570.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones [Idiomarina loihiensis L2TR] Length = 857 Score = 212 bits (540), Expect = 2e-53 Identities = 31/274 (11%), Positives = 81/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 248 GAKFRGEFEERLKAVLTELSKEEGRIILFIDEMHTMVGAGKADGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ + P++E+ ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVLVEEPNVEDTIA--ILRGLKERYELHHSVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++M+ K ++ LE + Sbjct: 366 TDPAIVAAASLSHRYISDRKLPDKAID--LID--EAASSIRMQIDSKPEDLDRLERRIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E Q + D+A ++ + K + + + L + Sbjct: 422 LKLERQALQKEKDDASKKRLEILHDELDEQERKYEELEEVWNTEKAAVQGTQHIKAQLEQ 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + ++ D M I L + +++ Sbjct: 482 ARTDMDIARRAGDLNRMSELQYGRIPELERQLDL 515 >gi|18145090|dbj|BAB81134.1| clpB protein [Clostridium perfringens str. 13] Length = 866 Score = 212 bits (540), Expect = 2e-53 Identities = 35/273 (12%), Positives = 84/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + I + ++ + + Sbjct: 253 GAKYRGEFEERLKAVLKEVQSSEGKILLFIDEIHTIVGAGKTDGAMDAGNLIKPMLARGE 312 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ + P++E ++ EI ++ Sbjct: 313 LHCIGATTFDEYRQYIEKDKALERRFQPVIVEEPTVEET--VSILRGLKERFEIHHGIRI 370 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R + A D L D+A A ++ E +++ + + + Sbjct: 371 HDSAIVAAAKLSHRYIQDRYLPDKAID--LIDEAGA--MIRSEIDSLPTELDIIRRKILM 426 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + + D+A +E T KY K + +S + + L E Sbjct: 427 LETEKEALSKENDDASKERLVALEKELAELQDKNDEMTIKYEKEKSHISAVRDLKAELDE 486 Query: 445 ELKAQENSQCDFDPMK--MRMESEIRGLLKGME 475 E + ++D K +I L + ++ Sbjct: 487 ARGLAEKYEREYDLNKVAELKYGKIPELERKIK 519 >gi|69954129|ref|ZP_00640937.1| AAA ATPase, central region:Clp, N terminal [Shewanella frigidimarina NCIMB 400] Length = 865 Score = 212 bits (539), Expect = 2e-53 Identities = 36/274 (13%), Positives = 80/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + Sbjct: 256 GAKYRGEFEERLKAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGD 315 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 316 LHCVGATTLDEYRQYIEKDAALERRFQKVIVDEPSVEDTIA--ILRGLKERYELHHHVEI 373 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++M+ K ++ LE Sbjct: 374 TDPAIVAAATMSHRYISDRKLPDKAID--LID--EAASSIRMQIDSKPEVLDRLERRAIQ 429 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + E ++DEA R+ + + + A + + L + Sbjct: 430 LKLEEQALSKESDEASRKRLEFLQHELRDVESKAAEMNEIWHTEKAALAGTQHIKADLEQ 489 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 E ++ D M I L K +++ Sbjct: 490 ARMDLEVARRAGDLTRMSELQYGRIPELEKQLDL 523 >gi|67985293|gb|EAM73247.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Kineococcus radiotolerans SRS30216] Length = 878 Score = 212 bits (539), Expect = 2e-53 Identities = 35/272 (12%), Positives = 76/272 (27%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D ++ +D + + ++ + + Sbjct: 248 GAKYRGEFEERLKAVLQEIQDSDGQVVTFIDELHTVVGAGAGEGAMDAGNMLKPMLARGQ 307 Query: 276 S---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + ++ + FQ+ PS+ + G ++ E V Sbjct: 308 LRLVGATTLDEYRERIEKDPALERRFQQVFVGEPSVPDTIG--ILRGLRERYEAHHKVAI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R + A D L D A + L+ME +I+EL V Sbjct: 366 SDAALVAAATLSDRYISGRQLPDKAID--LVD--EAASRLRMEIDSSPVEIDELRRAVDR 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFE 444 + E + D A R T+++ + + + + + E Sbjct: 422 MRMEELALSKEEDAASRNRLETLRAQLADKQEQLTALTARWEQEKAGLNRVGDLKHQVDE 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGM 474 E Q + D + I L + Sbjct: 482 LRSQAERLQREGDLGRASEILYGRIPALEAEL 513 >gi|33519653|ref|NP_878485.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone system with DnaK, DnaJ, and GrpE [Candidatus Blochmannia floridanus] Length = 872 Score = 212 bits (539), Expect = 2e-53 Identities = 34/271 (12%), Positives = 80/271 (29%), Gaps = 19/271 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + I +D + + + + + + Sbjct: 251 GTKYRGEFEERFKKVLYAVSKDNNTILFIDELHVMVGAGKTDGSMDASNMIKPKLARGEL 310 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ+ P++EN ++ E+ V T Sbjct: 311 HCVGATTLDEYSRYIEKDAALERRFQKIFIIEPNIENTIA--ILRGLKERYELHHNVHIT 368 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R + A D L D A + ++++ K ++ L+ + Sbjct: 369 DPAIVAAATLSNRYISDRQLPDKAID--LID--EAASSIRIQIDSKPEDLDRLDRRIIQL 424 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFEE 445 + E + ++DE ++ S++ + R S + + L + Sbjct: 425 KLECQALKKESDELSKKRLEILSMELSQKEQEYSVLESEWKRERSSLFDIQNIKSDLEKA 484 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + S+ D +M I L K + Sbjct: 485 KTILDQSRRIGDLAQMSELQYGRIPELEKKL 515 >gi|69945234|ref|ZP_00636365.1| AAA ATPase, central region:Clp, N terminal [Shewanella denitrificans OS-217] Length = 862 Score = 211 bits (538), Expect = 3e-53 Identities = 33/274 (12%), Positives = 79/274 (28%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + Sbjct: 248 GAKYRGEFEERLKAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGD 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ + PS+E+ ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVLVNEPSVEDTIA--ILRGLKERYELHHHVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++M+ K ++ LE Sbjct: 366 TDPAIVAAASMSHRYISDRKLPDKAID--LID--EAASSIRMQIDSKPEVLDRLERRAIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + E + D+A R+ + + + A + + L + Sbjct: 422 LKLEEQALSKETDDASRKRLEHLQLELKDVSAKASELNEIWHTEKAALAGTQHIKADLEQ 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + ++ D M I L K +++ Sbjct: 482 ARMDLDVARRAGDLTRMSELQYGRIPELEKQLDL 515 >gi|28629052|gb|AAO49455.1| heat shock protein 78 [Leptosphaeria maculans] Length = 807 Score = 211 bits (538), Expect = 3e-53 Identities = 39/272 (14%), Positives = 89/272 (32%), Gaps = 19/272 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + + +I +D + + + + + + Sbjct: 186 GAKFRGDFEERLKSVLKEVEEAKKGVILFVDELHTLLGLGKAEGSIDASNLLKPALSRGE 245 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 +L ++ + FQ P++++ ++ E+ V+ T Sbjct: 246 LQLCGATTLSEYRQIEKDAALARRFQPIQVGEPTVQDTI--SILRGIKERYEVHHGVRIT 303 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + L+++++ K I+EL+ + Sbjct: 304 DNALVAAASYSNRYITDRFLPDKAID--LVD--EAASALRLQQESKPDAIQELDRQIMTI 359 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 Q E + + + D A +E T K+ K R L E + ++ L + Sbjct: 360 QIELESLRKETDIASKERRQRLEESLKQKQEEAKGLTEKWEKERAELEEIKNAQENLEKA 419 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E ++ + + K S I L++ + Sbjct: 420 RLELEQARREGNFAKAGELQYSRIPELIEKLP 451 >gi|46202513|ref|ZP_00053096.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Magnetospirillum magnetotacticum MS-1] Length = 698 Score = 211 bits (537), Expect = 3e-53 Identities = 32/273 (11%), Positives = 76/273 (27%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + + + + Sbjct: 250 GAKFRGEFEERLKAVLTEVTAANGEVVLFIDEMHTLIGAGAAEGSMDASNLLKPALARGE 309 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ P +E+ ++ E+ V+ Sbjct: 310 LHCIGATTLNEYRKHVEKDAALARRFQPVFVTEPGVEDT--VSILRGLKEKYELHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A + L+M+ K ++EL+ + Sbjct: 368 ADGALVSAATLSNRYITDRFLPDKAID--LVD--EAASRLRMQIDSKPEALDELDRRIVQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFE 444 + E + + ++D R+ + ++ + A+ + ++ L E Sbjct: 424 LKIEREALKKESDAGSRDRLGKIEVELTQLERESFDMSERWRAEKSQLADSTKVKEQLEE 483 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 N++ + I L K +E Sbjct: 484 ARIELANAERAANWGRAGELKFGVIPELEKRIE 516 >gi|73667261|ref|YP_303277.1| AAA ATPase, central region:Clp, N terminal [Ehrlichia canis str. Jake] Length = 857 Score = 211 bits (537), Expect = 4e-53 Identities = 36/273 (13%), Positives = 80/273 (29%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + A+I +D + + + + + Sbjct: 250 GTKYRGEFEERLKAVINEIVASNGAVILFIDELHTLVGAGATDGAMDASNLLKPALARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ P++ + ++ EI ++ Sbjct: 310 IHCIGATTLDEYRQHIEKDAALARRFQPVFISEPTVNDTI--SILRGLKEKYEIHHGIRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + R A D L D A + ++E K I+EL+ + Sbjct: 368 MDSAIIAASTLSNRYITDRFLPDKAID--LID--EAASRARIEIDSKPEVIDELDRKIIQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLFE 444 + EA + + + E+ ++ SK+ ++ + +E + L Sbjct: 424 LKIEAGVLEKENTESSKQRLVKLNEELDKLNIQAAELNSKWQAEKIKILKMQECAEKLDN 483 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E +Q + K M I L K ++ Sbjct: 484 ARSDLEKAQRSGNLAKAGELMYGIIPELEKELK 516 >gi|67907151|ref|ZP_00505556.1| AAA ATPase, central region:Clp, N terminal [Polaromonas sp. JS666] Length = 866 Score = 210 bits (536), Expect = 4e-53 Identities = 35/275 (12%), Positives = 79/275 (28%), Gaps = 22/275 (8%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D I +D + + + + + + Sbjct: 246 GAKFRGEFEERLKTVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 305 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E ++ E+ VQ Sbjct: 306 LHCVGATTLDEYRKYIEKDAALERRFQKILVDEPTVEATIA--ILRGLQEKYEVHHGVQI 363 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A +K+E K ++ L+ + Sbjct: 364 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAAAKIKIEMDSKPEVMDRLDRRLIQ 419 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-----EAEERRQY 441 Q E + + + DEA ++ + + + E Sbjct: 420 LQIEREAVRREKDEASQKRFGLIEVEIAKLQKEISDLDEIWQAEKAQALGSKDVMEEIDR 479 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + +++ DF+ + ++ L K ++ Sbjct: 480 IRFQIEEFTRKG-DFNKVAELQYGKLPELEKRLKA 513 >gi|71547803|ref|ZP_00668357.1| AAA ATPase, central region:Clp, N terminal [Syntrophobacter fumaroxidans MPOB] Length = 873 Score = 210 bits (536), Expect = 5e-53 Identities = 33/274 (12%), Positives = 83/274 (30%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + ++ +D + I + ++ + + Sbjct: 253 GAKYRGEFEERLKAVLQEIKESEGGILLFIDELHTIVGAGKAEGSMDAGNMLKPMLARGE 312 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ D P++E+ ++ E+ V+ Sbjct: 313 LHCIGATTLDEYRKYIEKDAALERRFQPVLVDQPTVEDTI--SILRGLKERYEVHHGVKI 370 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D+ACA ++ E + +++E+ V Sbjct: 371 QDSALVAAAVLSGRYITDRFLPDKAID--LVDEACA--MIRTEIDSRPEELDEVMRRVMQ 426 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQY 441 + E + + D+A +E ++++ + E + Sbjct: 427 LEIEEVALKKEKDKASQERLEALRKEIGELRARTDAMSAQWEAEKQAIKKVQAIREEIEK 486 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + +++ E Q D + + L K ++ Sbjct: 487 VRRDIEVAER-QFDLQKVAELKHGLMPDLEKKLK 519 >gi|32423740|gb|AAP81264.1| ClpB [Pseudomonas aeruginosa] Length = 854 Score = 210 bits (536), Expect = 5e-53 Identities = 35/274 (12%), Positives = 82/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 248 GAKFRGEFEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D PS E+ ++ E+ V Sbjct: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIA--ILRGLKERYEVHHGVSI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A+ R + A D L D A + ++ME K +++ L+ + Sbjct: 366 TDGAIIAAAKLSHRYITDRQLPDKAID--LID--EAASRIRMEIDSKPEELDRLDRRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + E + + + DEA R+ + + + +Q + + Sbjct: 422 LKIEREALKKEDDEATRKRLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQ 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 + E ++ D M I L + ++M Sbjct: 482 AKQEMEAARRKGDLESMARIQYQTIPDLERSLQM 515 >gi|74019149|ref|ZP_00689767.1| AAA ATPase, central region:Clp, N terminal [Burkholderia ambifaria AMMD] Length = 865 Score = 210 bits (535), Expect = 6e-53 Identities = 33/274 (12%), Positives = 81/274 (29%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D PS+E ++ E+ V Sbjct: 308 LHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVDI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A + +KME K ++++L+ + Sbjct: 366 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAASKIKMEIDSKPEEMDKLDRRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQY 441 + E + + + DEA ++ + + ++ +E + Sbjct: 422 LKIEREAVKKEQDEASQKRLQLIEEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEK 481 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + ++ + + + ++ L ++ Sbjct: 482 VRADIVRLQREGK-LEKVAELQYGKLPQLESQLK 514 >gi|66802530|ref|XP_635137.1| hypothetical protein DDB0183816 [Dictyostelium discoideum] Length = 886 Score = 210 bits (535), Expect = 7e-53 Identities = 39/274 (14%), Positives = 86/274 (31%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + + ++ + + Sbjct: 248 GAKYRGDFEERLKAVLKEVKDSNGGIILFIDEIHLVLGAGKTDGAMDAANLLKPMLARGE 307 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + FQ+ + P++ + ++ E V+ Sbjct: 308 LRCIGATTLDEYRQYVEKDPAFERRFQQVFVNEPTVNDTI--SILRGLKERYETHHGVRI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + V A+ R A D L D+ACA + +++ + I+ LE Sbjct: 366 TDNALVVAAQLSHRYITNRFLPDKAID--LVDEACA--NTRVQLNSQPEAIDNLERRRLQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLFE 444 + E+ + + D+A ++ +KY K R + E R+ L + Sbjct: 422 LEVESAALEKEEDDASKQRLKAVQEELNQIKDELQPLEAKYQKERSRVDKIRELRKKLED 481 Query: 445 ELKAQENSQCDFDPMKMRMES--EIRGLLKGMEM 476 +++ +D I L K +E+ Sbjct: 482 IKVKLSDAERRYDTSAAADYRYFVIPDLEKQIEV 515 >gi|42524440|ref|NP_969820.1| ATPase with chaperone activity, two ATP-binding domains [Bdellovibrio bacteriovorus HD100] Length = 855 Score = 210 bits (535), Expect = 7e-53 Identities = 28/274 (10%), Positives = 81/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + +I +D + + + + + + Sbjct: 244 GAKYRGEFEDRLKAVIKEVTSSDGQIILFIDELHTLVGAGKTEGAMDAGQLLKPALARGE 303 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ + PS+E+ ++ E+ ++ Sbjct: 304 LRCIGATTLDEYRKYIEKDAALERRFQTVMVEEPSVED--AITILRGLKEKYEVHHGIRI 361 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + + R A D L D A + L +E + +++++E + Sbjct: 362 TDAALVSAVKLSHRYITNRFLPDKAID--LID--EAASKLGIETRSVPEEVDKIERELMQ 417 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + + + DE+ RE ++ + + ++ + + + Sbjct: 418 LRIEKEALKKEKDESARERLAVIDKEITELNAKNQLLREQWEFEKGGIEGIKKLKADIED 477 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGMEM 476 A ++ + D ++ K ++ Sbjct: 478 LKVAVAKAEREGDLGKAAELKYGKLPEAEKKLKA 511 >gi|68171311|ref|ZP_00544710.1| AAA ATPase, central region:Clp, N terminal [Ehrlichia chaffeensis str. Sapulpa] Length = 857 Score = 210 bits (535), Expect = 7e-53 Identities = 34/273 (12%), Positives = 80/273 (29%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + A+I +D + + + + + Sbjct: 250 GTKYRGEFEERLKYVINEIVASNGAVILFIDELHTLVGAGATDGAMDASNLLKPALARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ ++ + ++ E+ ++ Sbjct: 310 IHCIGATTLDEYRQHIEKDAALARRFQPVFVSESTVNDTI--SILRGLKEKYEVHHGIRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + R A D L D A + +++E K I+EL+ + Sbjct: 368 MDSAIIAASTLSNRYITDRFLPDKAID--LID--EAASRVRIEIDSKPEVIDELDRKIIQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLFE 444 + EA + + + E+ ++ SK+ ++ + +E + L Sbjct: 424 LKIEAGVLEKENTESSKQRLAQLSEELNKLSIQATELNSKWQAEKMKILKMQECVEKLDN 483 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E +Q + K M I L K ++ Sbjct: 484 ARNDLEKAQRSGNLAKAGELMYGIIPELEKELK 516 >gi|67676700|ref|ZP_00473446.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chromohalobacter salexigens DSM 3043] Length = 860 Score = 210 bits (534), Expect = 8e-53 Identities = 34/276 (12%), Positives = 82/276 (29%), Gaps = 21/276 (7%) Query: 217 HTSELFGFVKDVFQHC-APNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKAVLGELAKEEGRVILFVDELHTMVGAGKAEGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P+ E+ ++ E+ V Sbjct: 308 LHCVGATTLDEYRQHIEKDAALERRFQKVLVDEPNEEDTVA--ILRGLKERYEVHHGVDI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A+ R + A D L D A + ++ME +++ L+ + Sbjct: 366 TDGAIIAAAKLSTRYITDRQLPDKAID--LID--EAASRIRMELDSMPEEMDRLDRRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + + + DEA ++ + + + A + + L + Sbjct: 422 LKMEREALKKETDEATKKRLDSLEAQIESLEREYADLEEVWKAEKASIQGAAQFKAELEQ 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGM-EMT 477 E ++ D M I L K + E + Sbjct: 482 ARIDLEAARRQGDLGRMSELQYGVIPKLEKQIAEAS 517 >gi|58584441|ref|YP_198014.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 853 Score = 210 bits (534), Expect = 9e-53 Identities = 38/272 (13%), Positives = 82/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + +I +D + + + + + + Sbjct: 250 GTKFRGEFEERLKAVINELAKAEGKIILFIDELHTLVGAGATSGAMDASNLLKPALARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ P+ + ++ E+ ++ Sbjct: 310 IRCIGATTLDEYREHIEKDPALARRFQPVFISQPTETDT--VSILRGLKERYEVHHGIRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D A + +++E K I+ELE + Sbjct: 368 TDGAIIAAAMLSNRYITDRFLPDKAID--LID--EAASRVRIEMDSKPEIIDELERKIVQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E+++ + + DE ++ SK+ K +++ +E + L Sbjct: 424 LKIESEVLKKERDENSKQRLKKINEEIENLNSKFTDLNSKWQMEKNKIARIQETAEKLDN 483 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 K E +Q K M I L + Sbjct: 484 ARKELELAQRSGKLEKAGELMYGVIPHLENEL 515 >gi|8575704|gb|AAF78058.1| ClpB protease [secondary endosymbiont of Glycaspis brimblecombei] Length = 857 Score = 209 bits (533), Expect = 1e-52 Identities = 37/274 (13%), Positives = 82/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQH-CAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKDVLNDLAKQEGSVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ P++E+ ++ E+ VQ Sbjct: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVYVAEPTVEDTIA--ILRGLKERYELHHHVQI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D+A A L+M+ K ++ LE V Sbjct: 366 TDPAIVAAASLSNRYISDRMLPDKAID--LIDEAGA--SLRMQMDSKPEALDRLERRVTQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFE 444 + E + ++D+A ++ ++ + + + L Sbjct: 422 LKLEQQALKKESDDASKKRLKMLEEELTEKEREYSELEEEWKAEKAELTGTQHIKAELEN 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 + E ++ D KM +I L K +E Sbjct: 482 ARISMEQARRSGDLAKMSELQYGKIPELEKQLEA 515 >gi|34497399|ref|NP_901614.1| ATP-dependent Clp protease subunit; heat-shock protein [Chromobacterium violaceum ATCC 12472] Length = 859 Score = 209 bits (533), Expect = 1e-52 Identities = 33/274 (12%), Positives = 77/274 (28%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D + +D + + + + + + Sbjct: 248 GAKYRGEFEERLKAVLNDLSKDDGQTLIFIDEIHTLVGAGKADGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ PS+E+ ++ EI V Sbjct: 308 LHCIGATTLDEYRKYIEKDAALERRFQKVLVGEPSVEDTIA--ILRGLQEKYEIHHGVDI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A + +KME K +++L+ + Sbjct: 366 TDPAIVAAAELSQRYITDRFLPDKAID--LID--EAASRIKMELDSKPEAMDKLDRRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQY 441 + E + ++DEA ++ + + +E Sbjct: 422 LKIEREAVNKESDEASQKRLKLIEDEIAELSREYADLEEIWKAEKAAQQGSQSIKEEIDR 481 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 L +++ + + ++ L ++ Sbjct: 482 LKVDMEELKRKGDW-QKLAELQYGKLPQLEARLK 514 >gi|38492939|pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb Length = 854 Score = 209 bits (533), Expect = 1e-52 Identities = 38/273 (13%), Positives = 82/273 (30%), Gaps = 19/273 (6%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 240 GAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALARGE 299 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 +LI ++ + FQ D P++E ++ E+ V+ + Sbjct: 300 LRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETI--SILRGLKEKYEVHHGVRIS 357 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R + R A D L D A L+M + +I+ LE Sbjct: 358 DSAIIAAATLSHRYITERRLPDKAID--LID--EAAARLRMALESAPEEIDALERKKLQL 413 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 + E + + + D +E +++ + R L + E + L E Sbjct: 414 EIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEV 473 Query: 446 LKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + E ++ +D E+ L +E Sbjct: 474 RREIELAERQYDLNRAAELRYGELPKLEAEVEA 506 >gi|11561806|gb|AAC83688.2| 101 kDa heat shock protein; HSP101 [Nicotiana tabacum] Length = 909 Score = 209 bits (532), Expect = 1e-52 Identities = 36/272 (13%), Positives = 83/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + ++ + + Sbjct: 250 GAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQ 309 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + FQ+ PS+ + ++ E V+ Sbjct: 310 LRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTI--SILRGLKERYEGHHGVKI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + V A+ R A D L D+ACA +++++ + +I+ LE Sbjct: 368 QDRALVVAAQLSSRYITGRHLPDKAID--LVDEACA--NVRVQLDSQPEEIDNLERKRIQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + D+A + +Y K R+ E +Q E Sbjct: 424 LEVELHALEKEKDKASKARLIEVRKELDDLRDKLQPLMMRYKKEKERIDELRRLKQKRDE 483 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + A + ++ +D + I+ + + Sbjct: 484 LIYALQEAERRYDLARAADLRYGAIQEVETAI 515 >gi|56419334|ref|YP_146652.1| ATP-dependent Clp protease ATP-binding subunit [Geobacillus kaustophilus HTA426] Length = 862 Score = 209 bits (532), Expect = 1e-52 Identities = 39/273 (14%), Positives = 83/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I ++ + + Sbjct: 249 GAKFRGEFEERLRAVLNEIKKSEGRIILFIDELHTIVGAGRAEGAIDAGNMLKPMLARGE 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ P++E+ ++ E+ V+ Sbjct: 309 LRCIGATTLDEYRQYIEKDPALERRFQQVLVQEPTVEDTI--SILRGLKERYEVHHGVKI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + A R A D L D+ACA ++ E + +++E+ V Sbjct: 367 HDRALVAAAVLSDRYISDRFLPDKAID--LVDEACA--TIRTEMESMPSELDEVMRRVMQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + DEA RE +++ K + L R+ L Sbjct: 423 LEIEEAALSKETDEASRERLAALQKELADLREKANAMKAQWQKEKEALDRVRRLREALER 482 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 + E ++ ++D I L K ++ Sbjct: 483 AKRELEEAENEYDLNKAAELRHGRIPQLEKQLK 515 >gi|9651530|gb|AAF91178.1| ClpB [Phaseolus lunatus] Length = 977 Score = 209 bits (532), Expect = 1e-52 Identities = 35/274 (12%), Positives = 82/274 (29%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + ++ + + Sbjct: 336 GAKYRGDFEERLKAVLKEVTASNGQIILFIDEIHTVVGAGATSGAMDAGNLLKPMLGRGE 395 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ PS+E+ ++ E+ V+ Sbjct: 396 LRCIGATTLNEYRKYIEKDPALERRFQQVFCSQPSVEDTI--SILRGLRERYELHHGVKI 453 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R + A D L D A LKME K +++E++ + Sbjct: 454 SDSALVSAAVLADRYITERFLPDKAID--LVD--EAAAKLKMEITSKPTELDEIDRAILK 509 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E + D+A +E ++ + + +E Sbjct: 510 LEMEKLSLKNDTDKASKERLSKLENDLSLLKQKQKELAEQWDNEKVFMTRIRSIKEEIDR 569 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + E++A E D + + L + +E Sbjct: 570 VNLEMEAAERDY-DLNRAAELKYGTLMSLQRQLE 602 >gi|24427167|emb|CAD55328.1| ATP-dependent protease ATP-binding subunit [Streptomyces coelicolor A3(2)] Length = 865 Score = 209 bits (532), Expect = 1e-52 Identities = 42/273 (15%), Positives = 82/273 (30%), Gaps = 21/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + A D ++ +D + + ++ + Sbjct: 249 GAKYRGEFEERLKTVLAEIKDSDGQVVTFIDELHTVVGAGAGGDSAMDAGNMLKPMLARG 308 Query: 275 KS---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + + ++ + FQ+ P++E+ ++ E VQ Sbjct: 309 ELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDSIA--ILRGLKGRYEAHHKVQ 366 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R A D L D A + L+ME +I+EL+ V Sbjct: 367 IADSALVAAASLSDRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPVEIDELQRSVD 422 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLF 443 + E + D A E T+++ K + S E ++ L Sbjct: 423 RLKMEELAIGKETDAASLERLERLRRDLADKEEELRGLTARWEKEKQSLNRVGELKEKLD 482 Query: 444 EELKAQENSQCDF--DPMKMRMESEIRGLLKGM 474 E E +Q D D + EI L + + Sbjct: 483 ELRGQAERAQRDGDFDTASKLLYGEIPDLERDL 515 >gi|537446|gb|AAA67927.1| AtHSP101 Length = 911 Score = 209 bits (532), Expect = 1e-52 Identities = 39/278 (14%), Positives = 86/278 (30%), Gaps = 23/278 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + + ++ + + Sbjct: 249 GAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAGKTEGSMDAANLFKPMLARGQ 308 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + FQ+ PS+ + ++ E V+ Sbjct: 309 LRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTI--SILRGLKEKYEGHHGVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + A+ R A D L D+ACA +++++ + +I+ LE Sbjct: 367 QDRALINAAQLSARYITGRHLPDKAID--LVDEACA--NVRVQLDSQPEEIDNLERKRMQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + D+A + T KY K R+ E +Q E Sbjct: 423 LEIELHALEREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQKREE 482 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLK---GMEMT 477 + + + ++ +D + I+ + +E T Sbjct: 483 LMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGT 520 >gi|68002317|ref|ZP_00534948.1| AAA ATPase, central region:Clp, N terminal [Geobacter metallireducens GS-15] Length = 864 Score = 209 bits (532), Expect = 2e-52 Identities = 34/273 (12%), Positives = 78/273 (28%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + Sbjct: 250 GAKYRGEFEERLKAVIKEVAKSEGKVILFIDELHTLVGAGAAEGAMDASNMLKPALARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ + PS+E+ ++ E ++ Sbjct: 310 LHCIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIA--ILRGLKEKYETYHGIRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A + L++E +I+E+E + Sbjct: 368 KDSAIIAAATLSDRYITDRFLPDKAID--LID--EAASRLRIEIDSMPTEIDEVERKIIQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + D E + + + + + E +Q L E Sbjct: 424 LEIEKQALLREQDPHALERLQKLTDELNGLQAQAAELKAHWRQEKEIIKGLSELKQQLEE 483 Query: 445 ELKAQENSQCDFDPMK--MRMESEIRGLLKGME 475 + + ++ + + + EI + K ME Sbjct: 484 RKEQAKKAEREGNLARTAEIRYGEIPAIEKEME 516 Score = 38.7 bits (89), Expect = 0.35 Identities = 16/139 (11%), Positives = 49/139 (35%), Gaps = 2/139 (1%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 K DE +L+ ++ + + + + + +L + + + Sbjct: 390 DKAIDLIDEAASRLRIEIDSMPTEIDEVERKIIQLEIEKQALLREQDPHALERLQKLTDE 449 Query: 321 AEVVQDTARKMEVVAEEKMRMFKKARSVLDACD--RELEDKACAVTDLKMERQKKKPQIE 378 +Q A +++ ++ + K + + +E KA +L + + +I Sbjct: 450 LNGLQAQAAELKAHWRQEKEIIKGLSELKQQLEERKEQAKKAEREGNLARTAEIRYGEIP 509 Query: 379 ELESIVRLKQAEADMFQLK 397 +E + K+ + + Q + Sbjct: 510 AIEKEMEEKKQQLEALQKE 528 >gi|530207|gb|AAA66338.1| heat shock protein Length = 911 Score = 208 bits (531), Expect = 2e-52 Identities = 37/278 (13%), Positives = 85/278 (30%), Gaps = 23/278 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + ++ + + Sbjct: 250 GAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQ 309 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + FQ+ PS+ + ++ E V+ Sbjct: 310 LRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVVDTI--SILRGLKERYEGHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + + A+ R A D L D+ACA +++++ + +I+ LE Sbjct: 368 QDRALVMAAQLSNRYITGRHLPDKAID--LVDEACA--NVRVQLDSQPEEIDNLERKRMQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + D+A + KY K R+ E ++ E Sbjct: 424 LEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMKYRKEKERVDEIRRLKKKREE 483 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLK---GMEMT 477 L A + ++ +D + I+ + +E + Sbjct: 484 LLFALQEAERRYDLARAADLRYGAIQEVETAIQQLEGS 521 >gi|52209532|emb|CAH35485.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243] Length = 876 Score = 208 bits (531), Expect = 2e-52 Identities = 33/274 (12%), Positives = 81/274 (29%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D I +D + + + + + + Sbjct: 259 GAKYRGEFEERLKAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGE 318 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D PS+E ++ E+ V+ Sbjct: 319 LHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVEI 376 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A + +KME K ++++L+ + Sbjct: 377 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAASRIKMEIDSKPEEMDKLDRRLIQ 432 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQY 441 + E + + + DEA ++ + + ++ +E Sbjct: 433 LKIEREAVKKEPDEASQKRLALIEEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDK 492 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + ++ + + + ++ L ++ Sbjct: 493 VRADIARLQREGK-LEKVAELQYGKLPQLEARLK 525 >gi|21204024|dbj|BAB94722.1| clpB [Staphylococcus aureus subsp. aureus MW2] Length = 869 Score = 208 bits (531), Expect = 2e-52 Identities = 38/272 (13%), Positives = 88/272 (32%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + ++ + + Sbjct: 247 GAKYRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGE 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + + FQ+ P +E+ ++ E+ V+ Sbjct: 307 LHCIGATTLNEYREYIEKDSALERRFQKVAVSEPDVEDTI--SILRGLKERYEVYHGVRI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + AE R A D L D+ACA ++ E +++++ V Sbjct: 365 QDRALVAAAELSDRYITDRFLPDKAID--LVDQACA--TIRTEMGSNPTELDQVNRRVMQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSK--YLKLRLSEAEERRQYLFE 444 + E + ++D A ++ S+ K +++ +E+R L E Sbjct: 421 LEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLDE 480 Query: 445 ELKAQENSQ--CDFDPMKMRMESEIRGLLKGM 474 +A E++Q + + I L K + Sbjct: 481 SRQALEDAQTNNNLEKAAELQYGTIPQLEKEL 512 >gi|46580283|ref|YP_011091.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] Length = 865 Score = 208 bits (530), Expect = 2e-52 Identities = 32/273 (11%), Positives = 78/273 (28%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 253 GAKYRGEFEERLKAVLKEVEKSEGRIIMFIDELHTIVGAGKTDGAMDASNLLKPMLARGE 312 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ D P++E+ ++ E+ V+ Sbjct: 313 LHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPTIED--AISILRGLKERFEVHHGVRI 370 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + R + A D L D A ++ E ++E + Sbjct: 371 SDSAIVEAVTLSHRYITDRQLPDKAID--LID--EAAALIRTEIDSLPADLDEANRKIMQ 426 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + + + D A RE S++ + + + ++ + Sbjct: 427 LEIEREALRRETDVASRERLERLENELADLRAEQTALLSQWEREKGSIDHVRSIKEDIER 486 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGME 475 A E ++ +D S + L + +E Sbjct: 487 TRHAIEEAERAYDLNRAAELKYSRLLELERQLE 519 >gi|28378553|ref|NP_785445.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Lactobacillus plantarum WCFS1] Length = 867 Score = 208 bits (530), Expect = 3e-52 Identities = 33/274 (12%), Positives = 86/274 (31%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 250 GAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNIVGAGKTEGSMDAGNLLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 LI ++ + FQ+ PS+E+ ++ EI V+ Sbjct: 310 LHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSVEDTI--SILRGLKERFEIHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R A D L D+A A ++++E +++++ + Sbjct: 368 HDNALVAAAKLSDRYITDRYLPDKALD--LVDEASA--EIRVEMNSNPTELDQVNRQLMR 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + + D+A + + ++ + L +++ L + Sbjct: 424 LEVEEAALKKETDDASVKRLADVQKELASAKEKQRTLSERWDSEKKSLQALSDKKSALDK 483 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 EN++ ++D + I L + ++ Sbjct: 484 AKHDLENAENNYDLEQAAKLQHGTIPKLEQELKA 517 >gi|70732609|ref|YP_262372.1| ClpB protein PA4542 [Pseudomonas fluorescens Pf-5] Length = 854 Score = 208 bits (530), Expect = 3e-52 Identities = 35/274 (12%), Positives = 80/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D PS E+ ++ E+ V Sbjct: 308 LHCVGATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDTIA--ILRGLKERYEVHHKVAI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A+ R + A D L D A + ++ME K ++ LE + Sbjct: 366 TDGAIIAAAKLSHRYITDRQLPDKAID--LID--EAASRIRMEIDSKPEVLDRLERRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + E+ + + DEA + + + + +Q + + Sbjct: 422 LKVESQALKKEDDEAAIKRLEKLQEEIVRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQ 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + E ++ D M I L + ++M Sbjct: 482 SRQELEAARRKGDLNRMAELQYGVIPDLERSLQM 515 >gi|32422771|ref|XP_331829.1| hypothetical protein [Neurospora crassa] Length = 810 Score = 208 bits (529), Expect = 3e-52 Identities = 35/272 (12%), Positives = 81/272 (29%), Gaps = 19/272 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + + +I +D + + + + + + Sbjct: 175 GAKFRGDFEERLKKVLGEVQEANGEVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGE 234 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ P++E+ ++ E+ V+ T Sbjct: 235 LQCCGATTMTEYRQIEKDVALARRFQPIIVSEPTVEDTI--SILRGIKEKYEVHHGVRIT 292 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + L+++++ K I+ L+ + Sbjct: 293 DGALVAAATYSNRYITDRFLPDKAID--LMD--EAASSLRLQQESKPDDIQRLDQKIMTI 348 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFEE 445 Q E + + + D A E T ++LK + ++ + L Sbjct: 349 QIELESLRKEKDVASVERREKLEADLKKYQDEVAVLTERWLKEKAEIDSIKQTQAELDRA 408 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E +Q + + I L K + Sbjct: 409 RIELEQAQRTGNFARASELRFGVIPNLEKKLP 440 >gi|48783814|ref|ZP_00280195.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Burkholderia fungorum LB400] Length = 865 Score = 208 bits (529), Expect = 3e-52 Identities = 33/274 (12%), Positives = 80/274 (29%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E ++ E+ V Sbjct: 308 LHCVGATTLDEYRKYIEKDAALERRFQKVLVDEPTVEATIA--ILRGLQEKYELHHGVDI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A + +KME K +++ L+ + Sbjct: 366 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAASKIKMEIDSKPEEMDRLDRRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL-----SEAEERRQY 441 + E + + + DEA ++ + + ++ +E + Sbjct: 422 LKIEREAVKKEKDEASQKRLQLIEEEIERLNREYSDLDEIWTAEKAAVQGSAQLKEEIEK 481 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 E+ + + + ++ GL ++ Sbjct: 482 TRAEITRLQREGK-LEKVAELQYGKLPGLEAQLK 514 >gi|66782797|gb|EAL83760.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Deinococcus geothermalis DSM 11300] Length = 861 Score = 207 bits (528), Expect = 4e-52 Identities = 37/270 (13%), Positives = 77/270 (28%), Gaps = 19/270 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + + + + Sbjct: 249 GAKFRGEFEERLKAVIEEVVQSAGEVILFVDELHTIVGAGKTEGSPDAGNMLKPALARGE 308 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 +I ++ + FQ D PS+E+ ++ + V T Sbjct: 309 LHMIGATTLSEYREIEKDPALERRFQPVFVDEPSVEDTI--SILRGIKEKYQAHHNVNLT 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R + A D L D A L+M + +I++LE Sbjct: 367 DPALVAAAQLSHRYITDRQLPDKAID--LID--EAAARLRMALESSPERIDQLERRKLQL 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEE 445 + E + + + D + S++ R E+R L + Sbjct: 423 EIEREALKKEKDVDSQNRLLDIEDQLKAITDELAEVRSRWEAERQEVQALREKRDQLDQV 482 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKG 473 E ++ ++D K + L K Sbjct: 483 RTEIEKARREYDLGKAAQLEYGTLPQLEKD 512 >gi|24375079|ref|NP_719122.1| clpB protein [Shewanella oneidensis MR-1] Length = 857 Score = 207 bits (528), Expect = 4e-52 Identities = 36/274 (13%), Positives = 79/274 (28%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + Sbjct: 248 GAKYRGEFEERLKAVLNELAQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGD 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIA--ILRGLKERYELHHHVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A + ++M+ K ++ LE Sbjct: 366 TDPAIVAAATMSHRYVSDRKLPDKAID--LID--EAASSIRMQMDSKPESLDRLERRAIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + E + DEA R + + + + A + + L + Sbjct: 422 LKLEEQALAKENDEASRRRLDHLQEELRDVEAKASELSEIWRTEKAALAGTQHIKADLEQ 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 E ++ D M I L K +++ Sbjct: 482 ARLDLEVARRAGDLTRMSELQYGRIPELEKQLDL 515 >gi|15075632|emb|CAC47187.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Sinorhizobium meliloti] Length = 868 Score = 207 bits (528), Expect = 4e-52 Identities = 34/272 (12%), Positives = 83/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 249 GAKFRGEFEERLKAVLNEVRSEGGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGE 308 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ + P++E+ ++ E V+ Sbjct: 309 LHCVGATTLDEYRKHVEKDAALARRFQPVMVEEPTVEDTI--SILRGLKEKYEQHHKVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A + L+M+ K +++EL+ V Sbjct: 367 SDSALVAAAALSNRYITDRFLPDKAID--LMD--EAASRLRMQVDSKPEELDELDRRVIQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + + D + ++ T+++ K +L +A + ++ L E Sbjct: 423 LKIEREALKKETDVSSKDRLAKLELDLSSLEEEAAALTARWQAEKQKLGQAADLKKQLDE 482 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + +Q + + I L K + Sbjct: 483 ARNELQIAQRKGEFQRAGELAYGVIPNLEKEL 514 >gi|3360502|gb|AAC62621.1| heat shock protein [Plectonema boryanum] Length = 883 Score = 207 bits (528), Expect = 4e-52 Identities = 36/275 (13%), Positives = 87/275 (31%), Gaps = 20/275 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + ++ + + Sbjct: 261 GAKYRGEFEERLKAVLKEVTDSRGNIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGE 320 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 321 LRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTI--SILRGLKERYEVHHGVKI 378 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A LKME K +++E++ V Sbjct: 379 SDSALVAAATLSTRYISDRFLPSKAID--LVD--EAAAKLKMEITSKPEELDEVDRKVLQ 434 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E Q + D R+ +++ + +++ ++ ++ + Sbjct: 435 LEMERLSLQKENDAGSRDRLERLERELADFKEDQSKLNAQWQAEKSVITDLQKLKEEIDR 494 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEMT 477 + ++ D+D ++ L + +E T Sbjct: 495 VNLEIQQAERDYDLNRAAELKYGKLNELNRKVEET 529 >gi|51473305|ref|YP_067062.1| ATP-binding ClpB chaperone [Rickettsia typhi str. Wilmington] Length = 858 Score = 207 bits (528), Expect = 4e-52 Identities = 36/274 (13%), Positives = 90/274 (32%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F K + + + +I +D + + + ++ + + Sbjct: 249 GAQYRGEFEKRLKSVLSEIKESSGEIILFIDELHLLVGTGKVEGAMDASNLLKPMLARGE 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ PS+E+ ++ E+ V+ Sbjct: 309 LHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTI--SILRGIKEKYELHHAVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D+AC + +K+E K +++EL+ + Sbjct: 367 SDSAIVAAATLSNRYITDRYLPDKAID--LIDEAC--SRMKIELSSKPEELDELDRRIIQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYL--KLRLSEAEERRQYLFE 444 + E + + DE ++ +K+ K +L +A++ ++ L + Sbjct: 423 IKIELAALKKENDEHSKKKITSLTEELKQLDSKSYDMNTKWQAAKSKLQQAQKLKEELEQ 482 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 + ++ D + K I ++ ++ Sbjct: 483 ARIDLDRAERDANLAKASELKYGIIPEIMNKLQA 516 >gi|54035876|sp|Q8YM56|CLPB2_ANASP Chaperone clpB 2 Length = 872 Score = 207 bits (528), Expect = 5e-52 Identities = 38/276 (13%), Positives = 84/276 (30%), Gaps = 22/276 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + ++ + + Sbjct: 250 GAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 310 LRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTI--SILRGLKERYEVHHGVKI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A LKME K +++E++ + Sbjct: 368 SDSSLVAAATLSSRYISDRFLPDKAID--LVD--EAAARLKMEITSKPEELDEIDRKILQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQY 441 + E Q ++D A RE +++ +L +E Sbjct: 424 LEMEKLSLQKESDAASRERLERLEKELADLKEEQRTLNTQWQSEKDVINKLQSVKEEIDK 483 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 + E++ E + D + + L + +E T Sbjct: 484 VNLEIQQAERNY-DLNRAAELKYGNLTDLHRRLEAT 518 >gi|42453220|ref|ZP_00153127.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rickettsia rickettsii] Length = 857 Score = 207 bits (527), Expect = 5e-52 Identities = 34/272 (12%), Positives = 87/272 (31%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + + +I +D + + + ++ + + Sbjct: 249 GAKYRGEFEERLKAVLSEIKESSGEIILFIDELHLLVGTGKTDGVMDASNLLKPMLARGE 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ P++E+ ++ E+ V+ Sbjct: 309 LHCIGATTLDEYRKYIEKDAALARRFQPVYVSEPTVEDTI--SILRGIKEKYELHHAVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D+AC + +K+E K +++EL+ + Sbjct: 367 SDSAIVAAATLSNRYITDRYLPDKAID--LIDEAC--SRMKIELSSKPEELDELDRRIIQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL--RLSEAEERRQYLFE 444 + E + + DE ++ +K+ +L + ++ ++ L Sbjct: 423 IKIELAALKKENDEHSKKKIEHLTKALEKLESKSYDMGAKWQAEKSKLQQTQKLKEELDR 482 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 E ++ D + K I ++K + Sbjct: 483 SRNELERAERDANLAKASELKYGIIPEIMKKI 514 >gi|22295113|dbj|BAC08941.1| ClpB protein [Thermosynechococcus elongatus BP-1] Length = 871 Score = 207 bits (527), Expect = 5e-52 Identities = 38/273 (13%), Positives = 83/273 (30%), Gaps = 22/273 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + ++ + + Sbjct: 249 GAKYRGEFEERLKAVLKEVTDSNGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGE 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D PS+E+ ++ EI V+ Sbjct: 309 LRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTI--SILRGLKERYEIHHGVKI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A LKME K +++E++ + Sbjct: 367 SDTALVAAATLSARYISDRFLPDKAID--LVD--EAAAKLKMEITSKPEELDEIDRKILQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E Q + A R+ +++ + L +E + Sbjct: 423 LEMERLSLQKETSAASRDRLEKLERELADLKEEQSRLNAQWQAEKEVIDRLQSIKEEIEK 482 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 + E++ E + D + ++ L K + Sbjct: 483 VNIEIQQAERNY-DLNRAAELKYGKLTELHKKL 514 >gi|57866505|ref|YP_188155.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Staphylococcus epidermidis RP62A] Length = 869 Score = 207 bits (527), Expect = 6e-52 Identities = 36/272 (13%), Positives = 86/272 (31%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + ++ + + Sbjct: 247 GAKYRGEFEERLKAVLKEVKESEGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGE 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + + FQ+ P +E+ ++ E+ V+ Sbjct: 307 LHCIGATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTI--SILRGLKERYEVYHGVRI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + AE R A D L D+ACA ++ E +++++ V Sbjct: 365 QDRALVAAAELSDRYITDRFLPDKAID--LVDQACA--TIRTEMGSNPTELDQVNRRVMQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSK--YLKLRLSEAEERRQYLFE 444 + E + ++D + S+ K ++++ +E+R L Sbjct: 421 LEIEESALKNESDNPSKHRLEELQEELSNEKEKQSSLKSRVEQEKEKIAKVQEKRAELDS 480 Query: 445 ELKAQENSQCDF--DPMKMRMESEIRGLLKGM 474 +A E++Q + + I L K + Sbjct: 481 SRQALEDAQTEGNLEKAAELQYGTIPQLEKEL 512 >gi|16331048|ref|NP_441776.1| ClpB protein [Synechocystis sp. PCC 6803] Length = 872 Score = 207 bits (527), Expect = 6e-52 Identities = 35/274 (12%), Positives = 81/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + ++ + Sbjct: 250 GAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGA 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQE D P++ + ++ E+ V+ Sbjct: 310 LRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTI--SILRGLKERYEVHHGVKI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A LKME K +++E++ + Sbjct: 368 ADSALVAAAMLSNRYISDRFLPDKAID--LVD--EAAAKLKMEITSKPEELDEVDRKILQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E Q + D A +E ++ + + + ++ + + Sbjct: 424 LEMERLSLQRENDSASKERLEKLEKELADFKEEQSKLNGQWQSEKTVIDQIRTVKETIDQ 483 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGMEM 476 + +Q D+D ++ L + +E Sbjct: 484 VNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEA 517 >gi|73541668|ref|YP_296188.1| AAA ATPase, central region:Clp, N terminal [Ralstonia eutropha JMP134] Length = 862 Score = 207 bits (526), Expect = 6e-52 Identities = 37/275 (13%), Positives = 78/275 (28%), Gaps = 22/275 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D I +D + + + + + + Sbjct: 247 GAKYRGEFEERLKAVLNDVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGE 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D PS+E ++ E+ V+ Sbjct: 307 LHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIA--ILRGLQEKYELHHGVEI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A +KME K +++LE Sbjct: 365 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAAARIKMEIDSKPEAMDKLERRTIQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-----EERRQY 441 + E + + + DEA + + + + +E + Sbjct: 421 LKIEREAVKKETDEASLKRLDLIEQEITRLEKEYADLDEIWKAEKGAAQGTAALKEEIEK 480 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + E+ + D + ++ GL ++ Sbjct: 481 VKLEIAKLQREGK-LDKVAELQYGKLPGLEGKLKA 514 >gi|69927725|ref|ZP_00624886.1| AAA ATPase, central region:Clp, N terminal [Nitrobacter hamburgensis X14] Length = 878 Score = 207 bits (526), Expect = 6e-52 Identities = 36/273 (13%), Positives = 77/273 (28%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + + + + + Sbjct: 250 GAKYRGEFEERLKAVLQEVTSAAGGIVLFIDEMHTLIGAGKADGAMDASNLLKPALARGE 309 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ P++E+ ++ E V+ Sbjct: 310 LHCVGATTLDEYRKHVEKDAALARRFQPIFVSEPTVEDTI--SILRGLKDKYEQHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A LKM+ K +++ L+ + Sbjct: 368 ADAALVAAATLSHRYITDRFLPDKAID--LVD--EAAARLKMQVDSKPEELDSLDREIVR 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + + D R TS++ K +LS+A + L + Sbjct: 424 LRIEQEALKKENDAGSRMRLENLEKELVDLEKQSADLTSRWNAEKGKLSDAARLKSELDQ 483 Query: 445 ELKAQENSQC--DFDPMKMRMESEIRGLLKGME 475 N+Q ++ I L K +E Sbjct: 484 ARIELANAQRRGEYQKAGELAYGRIPELEKRLE 516 >gi|54035919|sp|Q9Z6E4|CLPB_STRAL Chaperone clpB Length = 857 Score = 207 bits (526), Expect = 7e-52 Identities = 41/272 (15%), Positives = 82/272 (30%), Gaps = 21/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + + ++ +D + + ++ + + Sbjct: 249 GAKYRGEFEERLKTVLSEIKESDGQIVTFIDELHTVVGAGAADSAMDAGNMLKPMLARGE 308 Query: 276 S---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + ++ + FQ+ PS+E+ ++ E VQ Sbjct: 309 LRMVGATTLDEYRERIEKDPALERRFQQVLVAEPSVEDSIA--ILRGLKGRYEAHHKVQI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A + L+ME +I+EL+ V Sbjct: 367 ADSALVAAATLSDRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPLEIDELQRSVDR 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFE 444 + E + D A R+ + + K + S E ++ L E Sbjct: 423 LKMEELALDRETDPASRQRLEKLRRDLADRERSCAAHRP-WEKEKQSLNRVGELKERLDE 481 Query: 445 ELKAQENSQC--DFDPMKMRMESEIRGLLKGM 474 E +Q DFD + EI L + + Sbjct: 482 LRGQAERAQQHGDFDTASKLLYGEIPTLERDL 513 >gi|68195152|gb|EAN09610.1| AAA ATPase, central region:Clp, N terminal [Enterococcus faecium DO] Length = 869 Score = 207 bits (526), Expect = 8e-52 Identities = 30/273 (10%), Positives = 82/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + I + ++ + + Sbjct: 250 GAKFRGEFEERLKAVLKEVKKSDGRILLFIDEIHNIVGAGKTEGSMDAGNLLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 LI ++ + FQ+ P++E+ ++ EI V Sbjct: 310 LHLIGATTLDEYRQYMEKDKALERRFQKVLVKEPTVEDTI--SILRGLKERFEIHHGVNI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D+A A +++E +++++ + Sbjct: 368 HDNALVAAATLSDRYITDRFLPDKAID--LIDEASA--TIRVEMNSMPTELDQVTRRLMQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFE 444 + E + ++D+A ++ ++ + +R + + Sbjct: 424 LEIEEAALKKESDDASKKRLKNLQEELAELREEANAMKMQWETEKEEVNSVSAKRAEIDK 483 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E+++ ++D + I L K ++ Sbjct: 484 AKHELEDAENNYDLERAAVLRHGTIPQLEKELK 516 >gi|50916753|ref|XP_468773.1| putative heat shock protein [Oryza sativa (japonica cultivar-group)] Length = 978 Score = 206 bits (525), Expect = 1e-51 Identities = 37/276 (13%), Positives = 80/276 (28%), Gaps = 22/276 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + D I +D + + ++ + + Sbjct: 331 GAKYRGEFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGE 390 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 391 LRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTI--SILRGLRERYELHHGVRI 448 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D + LKME K ++E++ V Sbjct: 449 SDSALVAAALLSDRYISGRFLPDKAID--LVD--ESAAKLKMEITSKPTALDEIDRAVIK 504 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQY 441 + E D+A R+ T ++ + ++ +E Sbjct: 505 LEMERLSLTNDTDKASRDRLSRIEAELSLLKEKQKDLTEQWEREKSVMTKIQSIKEEIDR 564 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 + E++ E D + + L + ++ T Sbjct: 565 VNVEIQQAEREY-DLNRAAELKYGSLNALQRQLQTT 599 >gi|71675495|ref|ZP_00673240.1| AAA ATPase, central region:Clp, N terminal [Trichodesmium erythraeum IMS101] Length = 870 Score = 206 bits (525), Expect = 1e-51 Identities = 38/274 (13%), Positives = 84/274 (30%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + ++ + + Sbjct: 250 GAKFRGEFEERLKAVLKEVTDSEGKIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 310 LRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVED--AISILRGLKERYEVHHGVKI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A LKME K +++E++ + Sbjct: 368 SDSSLVAAATLSTRYISDRFLPDKAID--LVD--EAAAKLKMEITSKPEELDEIDRKILQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E Q ++D A +E +++ + + +E Sbjct: 424 LEMEKLSLQKESDTASKERLGRLEKDLANLKEGQRALNAQWESEKGIISTIQTVKEEIDK 483 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + E++ E + D + + L K +E Sbjct: 484 VNIEIQQAERNY-DLNRAAELKYGRLINLQKQVE 516 >gi|68054833|ref|ZP_00538983.1| AAA ATPase, central region:Clp, N terminal:DNA-directed DNA polymerase B [Exiguobacterium sp. 255-15] Length = 857 Score = 206 bits (524), Expect = 1e-51 Identities = 33/274 (12%), Positives = 83/274 (30%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + ++ +D + I + ++ + + Sbjct: 247 GAKYRGEFEERLQAVLNEVKEAEGQILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGE 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ P +E+ ++ EI V+ Sbjct: 307 LHCIGATTLDEYRKYIEKDPALERRFQQVLVAEPDVEDTI--SILRGLKERFEIHHGVRI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D+ACA ++ + + +++ L V Sbjct: 365 HDNALVAAAILSDRYITDRFMPDKAID--LVDEACA--MIRTDMESMPAELDSLVRRVMQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFE 444 + E + + DEA R+ +++ + + ++ R L + Sbjct: 421 LEIEEAALKKETDEASRKRLETLQQELSSVREDESALRTRWEREKDSSQNVQQLRADLEK 480 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 A + ++ +D +I L +++ Sbjct: 481 AKLALQEAEGRYDLNTASEIKYGQIPALENQLKV 514 >gi|74022612|ref|ZP_00693193.1| AAA ATPase, central region:Clp, N terminal [Rhodoferax ferrireducens DSM 15236] Length = 870 Score = 206 bits (524), Expect = 1e-51 Identities = 36/274 (13%), Positives = 80/274 (29%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCA-PNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D I +D + + + + + + Sbjct: 246 GAKFRGEFEERLKNVLKDLAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 305 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ+ P++E+ ++ A E VQ Sbjct: 306 LHCVGATTLDEYRKYVEKDAALERRFQKILVGEPTVEDTIA--ILRGLQAKYETHHGVQI 363 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A + +K+E K +++L+ + Sbjct: 364 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAASKIKIELDSKPEVMDKLDRRLIQ 419 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-----EAEERRQY 441 Q E + + + DEA ++ + + E + Sbjct: 420 LQIEREAVRREKDEASQKRFGLIEEEIVRLQKEIADLDEIWKAEKAQAQGSKAIMEEIEK 479 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + +++ DF+ ++ GL K ++ Sbjct: 480 VRFQIEELTRKG-DFNRAGELQYGKLPGLEKQLK 512 >gi|68528191|gb|EAN51157.1| AAA ATPase, central region:Clp, N terminal [Ralstonia metallidurans CH34] Length = 862 Score = 206 bits (524), Expect = 1e-51 Identities = 36/275 (13%), Positives = 78/275 (28%), Gaps = 22/275 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D I +D + + + + + + Sbjct: 247 GAKYRGEFEERLKAVLNDVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGE 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D PS+E ++ E+ V+ Sbjct: 307 LHCIGATTLNEYRKYIEKDAALERRFQKVLVDEPSVEATIA--ILRGLQEKYELHHKVEI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A +KME K +++LE Sbjct: 365 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAAARIKMEIDSKPEAMDKLERRTIQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E + + + DEA R+ + + + +E + Sbjct: 421 LKIEREAVKKETDEASRKRLELIEQEIIRLEKEYADLDEIWRAEKGAAQGAAALKEEIEK 480 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + ++ + D + ++ L ++ Sbjct: 481 IKLDITRLQREGK-LDKVAELQYGKLPELEGKLQA 514 >gi|58417961|emb|CAI27165.1| ClpB protein [Ehrlichia ruminantium str. Welgevonden] Length = 863 Score = 205 bits (523), Expect = 2e-51 Identities = 36/273 (13%), Positives = 83/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + ++I +D + + + + + Sbjct: 254 GTKYRGEFEERLKAVVNEIVSSNGSIILFIDELHTLVGAGATDGAMDASNLLKPALARGE 313 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ P+ ++ ++ E + Sbjct: 314 IHCIGATTLDEYRKHIEKDVALARRFQTIFISEPTCDDTI--SMLRGLKERYEGHHGIDI 371 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + R A D L D A + +ME K I++L+ + Sbjct: 372 PDRSIIAAVALSQRYITDRYLPDKAID--LID--EAASRARMEIDSKPEVIDKLDRKIMQ 427 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + ++DE+ ++ +SK+ K+++S+ + ++ L Sbjct: 428 LKIEIGVLEKESDESSKQRLMKLKDELEKLNVQSAELSSKWQAEKMKMSKMKACKEKLDI 487 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E +Q D K M I + K ++ Sbjct: 488 ARSDLERAQRSGDLAKAGELMYGVIPEIEKELK 520 >gi|66805423|ref|XP_636444.1| hypothetical protein DDB0188234 [Dictyostelium discoideum] Length = 795 Score = 205 bits (523), Expect = 2e-51 Identities = 34/273 (12%), Positives = 77/273 (28%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + G + + Sbjct: 183 GAKFRGDFEERMKSILKDVAHFKGEVILFIDELHTLVGAGAVEGGMDASNMLKPQLARGD 242 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ PS+E+ ++ E+ V+ Sbjct: 243 LHCVGATTTAEYRKYIEKDPALARRFQSVLVQEPSVEDSIA--ILRGLKERYEVHHGVRI 300 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + R A D L D A + L+++++ +IE L + + Sbjct: 301 TDSALVAAVVNSQRYITDRFLPDKAID--LID--EAASRLRLQQESLPEEIENLNRQIIV 356 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFE 444 + E + + + D+ +E T + K + + + + L Sbjct: 357 SKIELEALKKEKDQVSKERREKLEKELKEKDKQYNKLTEVWKKEKEQLSIRKTAVEKLDR 416 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 + +Q D + S I L K + Sbjct: 417 AKIELQQAQRKGDLARAGELAYSIIPQLEKQIP 449 >gi|48763004|ref|ZP_00267561.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rhodospirillum rubrum] Length = 870 Score = 205 bits (522), Expect = 2e-51 Identities = 29/272 (10%), Positives = 70/272 (25%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + Sbjct: 248 GAKFRGEFEERLKAMLTEVSAAEGEIILFIDEMHTLIGAGAGEGAMDASNLLKPALARGD 307 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ P + + ++ E+ V+ Sbjct: 308 LHCVGATTLNEYRKHVEKDAALARRFQPVFVSEPGVADTI--SILRGIKEKYELHHGVRI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A + L+ME K ++EL+ + Sbjct: 366 ADNALVAAATLSNRYITDRFLPDKAID--LMD--EAASRLRMEVDSKPEALDELDRRIIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + E + + + D A T + + + A ++ L + Sbjct: 422 LKIEREALRKEKDIASEARLSDLEKELADLESQSATLTEDWKREKEGLAGSTRIKEQLEQ 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + ++ + + I L + + Sbjct: 482 ARGDLDIAKRQANWARAGELEYGVIPDLERRL 513 >gi|67517989|ref|XP_658767.1| hypothetical protein AN1163.2 [Aspergillus nidulans FGSC A4] Length = 800 Score = 205 bits (521), Expect = 3e-51 Identities = 37/272 (13%), Positives = 78/272 (28%), Gaps = 19/272 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 172 GAKFRGDFEERLKSVLKEVEEAQGGVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGE 231 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ PS+ ++ E+ V+ T Sbjct: 232 LQCCGATTLNEYRLIEKDVALARRFQPIQVGEPSVAATI--SILRGIKDKYEVHHGVRIT 289 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + L+++++ K I EL+ + Sbjct: 290 DGALVAAATYSNRYITDRFLPDKAID--LVD--EAASALRLQQESKPDIIRELDRDITTI 345 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 Q E + + + D + RE T + K + +R E Sbjct: 346 QIELESLRKETDISSRERREKLEEDLKAKREESRKLTEIWEKEKAEIESLKRTKEELERT 405 Query: 448 --AQENSQCDFDPMKM--RMESEIRGLLKGME 475 E +Q + + K S+I L + Sbjct: 406 RFELEQAQREGNFAKAGELRYSKIPSLEAKLP 437 >gi|68989120|dbj|BAE06227.1| heat shock protein [Lycopersicon esculentum] Length = 980 Score = 204 bits (520), Expect = 3e-51 Identities = 36/276 (13%), Positives = 78/276 (28%), Gaps = 22/276 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + +I +D + + ++ + + Sbjct: 331 GAKYRGEFEDRLKAVLKEVTESEGQIILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGE 390 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 391 LRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDT--VSILRGLRERYELHHGVRI 448 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A LKME K ++E+ V Sbjct: 449 SDTALVDAAILSDRYISGRFLPDKAID--LVD--EAAAKLKMEITSKPTALDEINRAVLK 504 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E D+A ++ T ++ + L +E Sbjct: 505 LEMERLSLTNDTDKASKDRLNRLETELSLLKERQAELTEQWEHEKSVMTRLQSIKEEIDR 564 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 + E++ E D + + L + +E + Sbjct: 565 VNLEIQQAEREY-DLNRAAELKYGSLNTLQRQLEAS 599 >gi|28210275|ref|NP_781219.1| clpB protein [Clostridium tetani E88] Length = 865 Score = 204 bits (520), Expect = 3e-51 Identities = 39/273 (14%), Positives = 82/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 252 GAKFRGEFEERLKAVLKEVENSQGKIILFIDEIHNIVGAGKTEGSMDAGNLIKPMLARGE 311 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ D P++E+ +I EI ++ Sbjct: 312 LNCIGATTFDEYRKYIEKDKALERRFQPVIIDEPTVEDTI--SIIRGLKERFEIHHGIRI 369 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R A D L D+A A ++ E +++ ++ + Sbjct: 370 HDSAIVAAAKLSQRYITDRYLPDKAID--LIDEAGA--MIRTEIDSLPTELDSIKRKIFQ 425 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFE 444 + E + + D +E T+KY K + R +Q L E Sbjct: 426 MEIEKEALAKEKDSRSKERLEDLEKELSNLKEKDKEMTAKYEKEKEQIINMRNLKQKLDE 485 Query: 445 ELKAQENSQCDFDPMK--MRMESEIRGLLKGME 475 E ++ ++D K I G+ +E Sbjct: 486 VKGQLEKAEREYDLNKVAELKYGIIPGIKSQIE 518 >gi|399265|sp|P17422|CLPB_BACNO Chaperone clpB Length = 860 Score = 204 bits (520), Expect = 4e-51 Identities = 38/273 (13%), Positives = 80/273 (29%), Gaps = 22/273 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + +I +D + + + + + Sbjct: 252 GTKYRGEFEERLKAVLDEITKADGQIILFIDEIHTMVGAGKSEGSLDAGNMLKPALARGD 311 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D PS+E+ ++ E+ + Sbjct: 312 LHCIGATTLDEYRQYMEKDAALERRFQKVIVDEPSVEDTIA--ILRNLQERYEVHHGINI 369 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A+ R + A D L D A ++ME K +++++ + Sbjct: 370 TDPALVAAAQLSHRYISGRKLPDKAID--LMD--EAAAQIRMELDSKPEVMDKIDRRLIQ 425 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 Q E + + D A + +L + +E +E+ Sbjct: 426 LQIERMALEKETDAASKRRLSDLEAEIAAQEKEYADLEEIWLAEKAGNAGAAEIKEQLDK 485 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 L EL+A + + DF I K + Sbjct: 486 LRVELEAAKR-RGDFARASEIQYGLIPAKEKQL 517 >gi|39944910|ref|XP_361992.1| hypothetical protein MG04437.4 [Magnaporthe grisea 70-15] Length = 786 Score = 204 bits (520), Expect = 4e-51 Identities = 35/272 (12%), Positives = 78/272 (28%), Gaps = 19/272 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 160 GAKFRGDFEERLKKVLTEVEQANGQVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGE 219 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ + P++E+ ++ E+ V+ T Sbjct: 220 LQCCGATTLNEYRLIEKDVALARRFQPILVNEPTVEDTI--SILRGIKDKYEVHHGVRIT 277 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + L+++++ K I L+ + Sbjct: 278 DGALVAAAAYSNRYITDRFLPDKAID--LMD--EAASSLRLQQESKPEDIMRLDQKIMTI 333 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLFEE 445 Q E + + + D A RE K+ K R ++ + L Sbjct: 334 QIELESLRKEKDVASRERREKLESDLKKLQDEVKELNDKWDKERSEIDAIKQTQAELDRA 393 Query: 446 LKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 E +Q + + I L + Sbjct: 394 RIELEVAQREGNFGRASELRFGVIPSLEAKLP 425 >gi|31872394|gb|AAP59445.1| ClpB-like protein [Meiothermus ruber] Length = 854 Score = 204 bits (519), Expect = 5e-51 Identities = 36/270 (13%), Positives = 76/270 (28%), Gaps = 19/270 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 240 GAKYRGEFEERLKAVIQETVQSAGQIILFIDEIHTVVGAGKAEGAVDAGNMLKPALARGE 299 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 LI ++ + FQ D PSLE ++ E+ V+ + Sbjct: 300 LHLIGATTLDEYREIEKDPALERRFQPVFVDEPSLEET--VSILRGIKEKYEVHHGVRIS 357 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R + A D L D A L+M + I+ L Sbjct: 358 DPALIAAAQLSHRYIADRKLPDKAID--LVD--EAAARLRMALESSPESIDALNRRKLQL 413 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 + E + + + D + +++ R + + +Q L E Sbjct: 414 EIEREALKKETDAESKFRLGELEKEIADLEEEIRKQQAEWEAEREIMQKLRAAQQRLDEV 473 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKG 473 E ++ +D K E+ L + Sbjct: 474 RTQIEQAERAYDLNKAAPLRYGELPKLEQE 503 >gi|39982528|gb|AAR33988.1| ClpB protein [Geobacter sulfurreducens PCA] Length = 865 Score = 203 bits (518), Expect = 6e-51 Identities = 32/273 (11%), Positives = 76/273 (27%), Gaps = 21/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + Sbjct: 250 GAKYRGEFEERLKAVIREVAKSEGKVILFIDELHTLVGAGAAEGAMDASNMLKPALARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ + PS+E+ ++ E ++ Sbjct: 310 LHCIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIA--ILRGLKEKYENYHGIRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A + L++E +I+E+E + Sbjct: 368 KDSAIIAAATLSDRYITDRFLPDKAID--LID--EAASRLRIEIDSMPTEIDEVERRIIQ 423 Query: 387 KQAEADMFQLK-ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 + E + D E + + + + RQ L Sbjct: 424 LEIEKQALLRESQDPHSLERLKKLADELEELKAKSAELKGHWQREKDIIGRVSSLRQRLE 483 Query: 444 EELKAQENSQCDFDPMK--MRMESEIRGLLKGM 474 E+ + + ++ + + + EI + K + Sbjct: 484 EKREEAKKAEREGNLARTAEIRYGEIPAIEKEI 516 >gi|71543204|ref|ZP_00664602.1| AAA ATPase, central region:Clp, N terminal [Syntrophomonas wolfei str. Goettingen] Length = 862 Score = 203 bits (518), Expect = 7e-51 Identities = 33/274 (12%), Positives = 82/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + ++ + + Sbjct: 247 GAKYRGEFEERLKAVLKEVEDSAGQVILFIDELHTVVGAGAAEGAMDASNLLKPMLARGE 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ + PS+E+ ++ E+ V+ Sbjct: 307 LRAIGATTISEYRKHIEKDAALERRFQPIMVNPPSVEDTI--SILRGLKERYEVHHGVRI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A L+ E +++E+ + Sbjct: 365 QDSALVAAAVLSDRYISDRFLPDKAID--LMD--EAAARLRTEIDSMPAELDEITRRIMQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + EA + DEA RE +++ + +S + ++ + + Sbjct: 421 LEIEAAALGKEKDEASRERLEDLLKELQDLKSEAEVMQAQWQAEKEAISRVGQLKRDIED 480 Query: 445 ELKAQENSQCDFDPMK--MRMESEIRGLLKGMEM 476 E ++ ++D + + L + ++ Sbjct: 481 CRYEMEKAEREYDLNRIAELKYGRLNELERKLKA 514 >gi|885934|gb|AAB09631.1| ClpB Length = 883 Score = 203 bits (517), Expect = 8e-51 Identities = 34/273 (12%), Positives = 89/273 (32%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALI-KELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D E +I +D + + ++ + + Sbjct: 259 GAKFRGEFEERLTAVLKEVTDSEGIIILFIDEMHTVVGAGAVQGSMDAGNLLKTMLARGE 318 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 319 LRCIGATTLGKYRQYIEKDAALERRFQQVFVDQPTVEDTI--SILRGLKERYEVHHGVRI 376 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D + LKME K +++E++ + Sbjct: 377 SDNALVAAAVLSTRYISDRFLPDKAID--LVD--ESAARLKMEITSKPEELDEIDRKILQ 432 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E Q ++D A +E +S++ + +++ + ++ + + Sbjct: 433 LEMERLSLQKESDLASQERLQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSVKEEIDQ 492 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 + ++ D+D ++ L + + Sbjct: 493 VNLLIQQAERDYDLNKAAELKYGKLTELQRKLN 525 >gi|15828345|ref|NP_302608.1| heat shock protein [Mycobacterium leprae TN] Length = 848 Score = 203 bits (516), Expect = 1e-50 Identities = 44/275 (16%), Positives = 87/275 (31%), Gaps = 21/275 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + +I +D + I ++ + Sbjct: 248 GAKYRGEFEQRLKVVLDDIKFSAGQIITFIDELHTIVGAGATGESAMDAGNMIKPMLARG 307 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + +L+ ++ + FQ+ PS+E+ G ++ E+ V+ Sbjct: 308 ELRLVGATTLDEYRRYIEKDAALERRFQQIFVGEPSVEDTVG--ILRGLKDRYEVHHGVR 365 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R A D L D A + L+ME + +I+E+E +VR Sbjct: 366 ITDSALVAAAALSDRYITARFLPDKAID--LVD--EAASRLRMEIDSRPVEIDEVERLVR 421 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 + E + DEA +E T+++ + + E ++ L Sbjct: 422 RFEIEEMALVNEEDEASKERLETLRAELADQKERLAELTARWQNEKNAIDVVRELKEQLE 481 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E ++ D D K I + K +E Sbjct: 482 TLRGESERAERDGDLAKAAELRYGRIPEVEKKLEA 516 >gi|49240131|emb|CAF26578.1| ATP-dependent clp protease, ATP-binding subunit clpB [Bartonella quintana str. Toulouse] Length = 879 Score = 203 bits (516), Expect = 1e-50 Identities = 35/272 (12%), Positives = 78/272 (28%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + A + +I +D + + + + + + Sbjct: 249 GAKYRGEFEERLKAVLAEVQAENGQIILFIDELHNLVGAGKSDGPMDASNLLKPALARGE 308 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ P+L++ ++ E V+ Sbjct: 309 LHCVGATTLDEYRKYVEKDAALARRFQPVFVPEPTLDDTI--SILRGIKEKYEQHHKVRL 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A L+M+ K +++ ++ + Sbjct: 367 ADSALIAAARLSNRYITDRFLPDKAID--LID--EAAARLRMQVDSKPEELDAIDRRILQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + + +E T+ + K +L A + ++ L E Sbjct: 423 LKIEREALKTDVEPTAKERLKIVQDELNTLEQKSTEMTTAWQAEKQKLGHAADLKKQLDE 482 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 A +Q + K S I L K + Sbjct: 483 ARNALAIAQRNGQFQKAGELAYSVIPELEKQL 514 >gi|66850118|gb|EAL90445.1| ATP-dependent Clp protease, putative [Aspergillus fumigatus Af293] Length = 797 Score = 202 bits (515), Expect = 1e-50 Identities = 36/272 (13%), Positives = 78/272 (28%), Gaps = 19/272 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + + + + + Sbjct: 169 GAKFRGDFEERLKSVLKEVEDAQGGVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGE 228 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ PS+ ++ E+ V+ T Sbjct: 229 LQCCGATTLNEYRLIEKDVALARRFQPIQVGEPSVAATI--SILRGIKNKYEVHHGVRIT 286 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + L+++++ K I EL+ + Sbjct: 287 DAALVAAATYSNRYITDRFLPDKAID--LVD--EAASALRLQQESKPDVIRELDRQITTI 342 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFEE 445 Q E + + + D + RE T + K + + ++ L Sbjct: 343 QIELESLRKETDISSRERREKLQEDLKAKQEESAKLTEVWEKEKAEIESLKRTKEELERA 402 Query: 446 LKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 + +Q + + K S I L + Sbjct: 403 RFELDRAQREGNFAKAGELRYSTIPSLEAKLP 434 >gi|52698325|ref|ZP_00339733.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rickettsia akari str. Hartford] Length = 858 Score = 202 bits (515), Expect = 1e-50 Identities = 37/272 (13%), Positives = 89/272 (32%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + D +I +D + + + ++ + + Sbjct: 249 GAKYRGEFEERLKAVLSEIKDSSGEIILFIDELHLLVGTGKTDGAMDASNLLKPMLARGE 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ P++E+ ++ E+ V+ Sbjct: 309 LHCIGATTLDEYRKYIEKDAALARRFQPVYVSEPTVEDTI--SILRGIKEKYELHHAVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D+AC + +K+E K +++EL+ + Sbjct: 367 SDSAIVSAATLSNRYITDRYLPDKAID--LIDEAC--SRMKIELSSKPEELDELDRRIIQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + DE ++ +K+ K +L +A++ ++ L Sbjct: 423 IKIELAALKKENDEHSKKKITHLTEELEKLESKSYDMNAKWHAEKSKLQQAQKLKEELER 482 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 E ++ D + K I ++K + Sbjct: 483 ARINLERAERDSNLAKASELKYGIIPEIMKKI 514 >gi|49476075|ref|YP_034116.1| ATP-dependent clp protease, ATP-binding subunit clpB [Bartonella henselae str. Houston-1] Length = 859 Score = 202 bits (515), Expect = 1e-50 Identities = 38/272 (13%), Positives = 78/272 (28%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + A + +I +D + + + + + + Sbjct: 249 GAKYRGEFEERLKAVLAEVQAENGQIILFIDELHNLVGAGKSDGPMDASNLLKPALARGE 308 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ P+LE+ ++ E V+ Sbjct: 309 LHCVGATTLDEYRKYVEKDAALARRFQPVFVPEPTLEDTI--SILRGIKEKYEQHHKVRL 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A L+M+ K +++ L+ + Sbjct: 367 ADSALIAAARLSNRYITDRFLPDKAID--LID--EAAARLRMQVDSKPEELDALDRRILQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + + +E T+ + K +L A + ++ L E Sbjct: 423 LKIEREALKTDVEPTAKERLKTVQAELETLEQQSREMTTAWQAEKQKLGHAADLKKQLEE 482 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 A +Q D K S I L K + Sbjct: 483 ARNALAIAQRDGQFQKAGELAYSVIPQLEKQL 514 >gi|23123825|ref|ZP_00105864.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc punctiforme PCC 73102] Length = 872 Score = 202 bits (513), Expect = 2e-50 Identities = 36/274 (13%), Positives = 80/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + ++ + + Sbjct: 250 GAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D PS+E+ ++ E V+ Sbjct: 310 LRCIGATTLDEYRKHIEKDAALERRFQQVYVDQPSVEDSI--SILRGLRERYENHHGVKI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A LKME K +++E++ + Sbjct: 368 SDSALVAAAVLSSRYISDRFLPDKAID--LVD--EAAARLKMEITSKPEELDEIDRKILQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL 446 + E Q ++D A RE +++ + + + E Sbjct: 424 LEMEKLSLQKESDAASRERLERLEKEIADLKEEQRTLNTQWQSEKDIIDKIQSVKKEIER 483 Query: 447 KAQE--NSQCDFDP--MKMRMESEIRGLLKGMEM 476 E ++ D+D + L + +E Sbjct: 484 VNLEIQQAERDYDLNRAAELKYGNLTSLHRQLEA 517 >gi|50876799|emb|CAG36639.1| probable heat shock protein ClpB [Desulfotalea psychrophila LSv54] Length = 868 Score = 202 bits (513), Expect = 2e-50 Identities = 29/272 (10%), Positives = 72/272 (26%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + +I +D + I + + + Sbjct: 250 GAKYRGEFEDRLKAVLKEVEKQAGNIILFIDELHTIVGAGASEGSMDASNMLKPALARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ PS+E+ ++ EI V+ Sbjct: 310 LHCVGATTLNEYKKYIEKDTALERRFQPVLVQEPSVEDTVA--ILRGIKEKYEIHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R A D L D A + L++E +I++L+ Sbjct: 368 QDAATVAAVTLSNRYIADRFLPDKAID--LID--EAASQLRIEIDSMPTEIDQLQRKCMK 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + + D A ++ + ++ ++ + Sbjct: 424 LEIEQEALKKEKDSASISRLQESKKQLADLSDELKGLMGQWNIERETIAGISSIKEEIDA 483 Query: 445 ELKAQENSQCDFDPMK--MRMESEIRGLLKGM 474 ++ ++ D K ++ GL + + Sbjct: 484 AQAEEQLAERAGDLQKVAQIRYQKLPGLGEKL 515 >gi|62426046|ref|ZP_00381176.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Brevibacterium linens BL2] Length = 868 Score = 202 bits (513), Expect = 3e-50 Identities = 36/275 (13%), Positives = 76/275 (27%), Gaps = 21/275 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + +I +D + + ++ + Sbjct: 250 GAKYRGEFEERFKAVLEEIKNADGQIITFIDELHTVVGAGATGDSAMDAGNMLKPMLARG 309 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + +L+ ++ + FQ+ P++E+ ++ E V Sbjct: 310 ELRLVGATTLDEYRENIEKDPALERRFQQVYVGEPNVEDTVA--ILRGLKERYEAHHKVS 367 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R + A D L D A + L+ME +I+EL V Sbjct: 368 INDGALIAAATMSNRYITGRQLPDKAID--LVD--EAASRLRMEIDSAPVEIDELRRAVD 423 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLF 443 + E + D A E + + R + + L Sbjct: 424 RLKMEDMALSKETDTASIERLGALRADLADREEELHGLEATWESQRAGLNRVGDLKTKLD 483 Query: 444 EELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + + +Q D D + EI + K +++ Sbjct: 484 DLRSQADKAQRDTDLETASRLLYGEIPAVQKEIDI 518 >gi|9755800|emb|CAC01744.1| clpB heat shock protein-like [Arabidopsis thaliana] Length = 968 Score = 201 bits (512), Expect = 3e-50 Identities = 40/274 (14%), Positives = 78/274 (28%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + D +I +D + + ++ + + Sbjct: 324 GAKYRGEFEDRLKAVLKEVTDSEGQIILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGE 383 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 384 LRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTI--SILRGLRERYELHHGVRI 441 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A LKME K ++EL+ V Sbjct: 442 SDSALVEAAILSDRYISGRFLPDKAID--LVD--EAAAKLKMEITSKPTALDELDRSVIK 497 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQY 441 + E D+A RE T ++ RL +E Sbjct: 498 LEMERLSLTNDTDKASRERLNRIETELVLLKEKQAELTEQWEHERSVMSRLQSIKEEIDR 557 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + E++ E D + + L + + Sbjct: 558 VNLEIQQAEREY-DLNRAAELKYGSLNSLQRQLN 590 >gi|33639012|emb|CAE08018.1| endopeptidase Clp ATP-binding chain B [Synechococcus sp. WH 8102] Length = 875 Score = 201 bits (512), Expect = 3e-50 Identities = 32/273 (11%), Positives = 81/273 (29%), Gaps = 22/273 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + ++ + + Sbjct: 262 GAKYRGEFEERLKAVLKEVTTSDGQIVLFIDEIHTVVGAGASGGAMDASNLLKPMLARGE 321 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D P++ + ++ E+ V+ Sbjct: 322 LRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVPDTI--SILRGLKERYEVHHGVRI 379 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D + LKME K QI+E++ + Sbjct: 380 ADSALVAAAMLSSRYITDRFLPDKAID--LVD--ESAARLKMEITSKPEQIDEIDRKILQ 435 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E ++D A +E +++ + LS +E + Sbjct: 436 LEMEKLSLGRESDSASQERLQRIERELAELGEQQSSLNAQWQSEKGAIDQLSALKEEIER 495 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 + +++ + + D + + L + + Sbjct: 496 VQLQVEQAKRNY-DLNKAAELEYGTLATLQRQL 527 >gi|22957954|ref|ZP_00005638.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rhodobacter sphaeroides 2.4.1] Length = 870 Score = 201 bits (511), Expect = 4e-50 Identities = 35/273 (12%), Positives = 81/273 (29%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 247 GAKYRGEFEERLKAVLNEVTSAAGEIILFIDEMHTLVGAGKSEGAMDAANLIKPALARGE 306 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ + P++E+ ++ E+ V+ Sbjct: 307 LHCIGATTLDEYRKHVEKDAALARRFQPLMVEEPTVEDTI--SILRGIKEKYELHHGVKI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A + L+ME K +++ L+ + Sbjct: 365 ADAALVAAATLSHRYITDRFLPDKAID--LVD--EAASRLRMEVDSKPEELDALDRQILQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL--RLSEAEERRQYLFE 444 Q EA+ + + D A ++ T+++ +L A + ++ L Sbjct: 421 AQIEAEALKKEDDAASKDRLAKLEKELSGMTERAAEMTAQWQAERDKLEAARDLKEQLDR 480 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E + + + + I + K +E Sbjct: 481 ARAELEQVKREGNLARAGELSYGVIPQIEKKLE 513 Score = 43.0 bits (100), Expect = 0.017 Identities = 21/180 (11%), Positives = 56/180 (31%), Gaps = 16/180 (8%) Query: 239 EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD 298 + I +D R D++ ++L ++++ + + + Sbjct: 387 DKAIDLVDEAASRLRMEVDSKPEELDALDRQILQAQIEAEALKKEDDAASKDRLAKLEK- 445 Query: 299 SPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVL--------- 349 S + A A + E +D +++ E ++ ++ Sbjct: 446 ELSGMTERAAEMTAQWQAERDKLEAARDLKEQLDRARAELEQVKREGNLARAGELSYGVI 505 Query: 350 DACDRELEDKACAVTDLKMERQKKKPQIEELESI------VRLKQAEADMFQLKADEARR 403 +++LE+ DL + + QI E+ ++ + E + +E R Sbjct: 506 PQIEKKLEEAEAREGDLLVSEAVRPEQIAEVVERWTGIPTSKMLEGEREKLLKMEEELGR 565 >gi|33634638|emb|CAE20624.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB [Prochlorococcus marinus str. MIT 9313] Length = 865 Score = 201 bits (511), Expect = 4e-50 Identities = 33/273 (12%), Positives = 83/273 (30%), Gaps = 22/273 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + ++ + + Sbjct: 249 GAKYRGEFEERLKAVLKEVTASEGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGE 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D P++++ ++ E+ V+ Sbjct: 309 LRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVQDTI--SILRGLKERYEVHHGVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D + LKME K +I+E++ + Sbjct: 367 ADNALVAAAVLSSRYIADRFLPDKAID--LMD--ESAARLKMEITSKPEEIDEIDRKIVQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E ++D +E +++ + + LS +E + Sbjct: 423 LEMEKLSLGRESDSVSKERLEKLERELAELAEQQSALNAQWQQEKGAIDDLSSLKEEIER 482 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 + +++ + S D + + GL K + Sbjct: 483 VQLQVEQAKRSY-DLNKAAELEYGTLAGLQKQL 514 >gi|46908440|ref|YP_014829.1| clpB protein [Listeria monocytogenes str. 4b F2365] Length = 866 Score = 201 bits (511), Expect = 4e-50 Identities = 34/268 (12%), Positives = 78/268 (29%), Gaps = 20/268 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + I + ++ + + Sbjct: 250 GAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAMDAGNMLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ P++E+ ++ EI V Sbjct: 310 LHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDT--VSILRGLKERFEIHHGVNI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D+ACA +++E +++E+ V Sbjct: 368 HDNALVAAASLSNRYITDRFLPDKAID--LVDEACA--TIRVEIDSMPSELDEVTRKVMQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + + D A SK+ + +S+ E R+ + Sbjct: 424 LEIEEAALKEEKDPASERRLEILQRELADYKEEANQMKSKWESEKNEISKIREVREQIDH 483 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGL 470 E ++ ++D +I + Sbjct: 484 LRHELEEAENNYDLNKAAELRHGKIPAV 511 >gi|71550106|ref|ZP_00670254.1| AAA ATPase, central region:Clp, N terminal [Nitrosomonas eutropha C71] Length = 863 Score = 200 bits (510), Expect = 5e-50 Identities = 35/272 (12%), Positives = 79/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D I +D + + + + + + Sbjct: 248 GAKYRGEFEERLKTVLKELAQDEGRTIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGE 307 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ+ D P +E ++ E+ V+ Sbjct: 308 LHCVGATTLDEYRKYVEKDAALERRFQKVLVDEPGVEATIA--ILRGLQEKYELHHGVEI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A ++ME+ K +++L+ + Sbjct: 366 TDPAIVAAAELSHRYITDRFLPDKAID--LID--EAAARIRMEQDSKPEVMDKLDRRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFE 444 + E + + + DEA ++ + +E ++ L + Sbjct: 422 LKIEREAVKKEKDEASKKRLALLEEEIEKLEREYADLDEILKAEKSRAKGSQEIKEELEK 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + +E ++ D K + I L + Sbjct: 482 LRREEEAARRKGDLQKASELLYGRIPQLETQL 513 >gi|66854676|ref|ZP_00398756.1| AAA ATPase, central region:Clp, N terminal [Anaeromyxobacter dehalogenans 2CP-C] Length = 927 Score = 200 bits (510), Expect = 6e-50 Identities = 37/273 (13%), Positives = 76/273 (27%), Gaps = 22/273 (8%) Query: 219 SELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS- 276 F + + +I +D + I + + + Sbjct: 305 KFRGEFEERLKAVLKEVTGSEGQIILFIDEMHTIVGAGAAEGAMDAGNMLKPALARGELH 364 Query: 277 --------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTA 328 + ++ + FQ PSL + ++ E+ V+ Sbjct: 365 AVGATTVNEYRKHIEKDPALERRFQPVFVGEPSLTDTI--SILRGLKDRYELHHKVRIQD 422 Query: 329 RKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQ 388 + A R A D L D A + L++E +++E+ + + Sbjct: 423 AALVEAARLSSRYITDRFLPDKAID--LVD--EAASRLRIEIDSMPTEVDEVRRRIGQLE 478 Query: 389 AEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLF 443 E + + DEA R ++ + LS+A + + L Sbjct: 479 IERQGLRKEQDEASRARLAAVEKELAARNEEFTALKGRWDAEKAVIQELSQARQELEALK 538 Query: 444 EELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 E A E Q DF + L + ++ Sbjct: 539 VEQAAAER-QADFQKAAEIKFGRLPELTRRVKA 570 >gi|24214579|ref|NP_712060.1| ATPase with chaperone activity, two ATP-binding domains [Leptospira interrogans serovar Lai str. 56601] Length = 860 Score = 200 bits (509), Expect = 6e-50 Identities = 29/274 (10%), Positives = 79/274 (28%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + +I +D + + ++ + + Sbjct: 250 GAKYRGEFEDRLKALLDEVKSSDGEVILFIDEIHTLVGAGATEGALDASNMLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ PS+E ++ E+ ++ Sbjct: 310 LRCIGATTLKEYQKYIEKDAALERRFQPVYVKEPSVEET--VTILRGLKGRYELHHGIRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A + +++E +++ ++ Sbjct: 368 LDSALIAAATLSNRYISDRFLPDKAVD--LID--EASSKMRIEIDSMPEELDRANKRIQS 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E + + + D A +E +++ + L + +E + Sbjct: 424 LKIEREALKKEQDTASKERLKTLERDLSEQEQNFQTLKARWDLEKSKIGRLKQIKEEIEK 483 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 L+A+ + + + + ++ L K +E Sbjct: 484 YKN-LEAEAERRGEINRVAEIRYGKLVDLQKELE 516 Score = 39.1 bits (90), Expect = 0.28 Identities = 27/229 (11%), Positives = 59/229 (25%), Gaps = 38/229 (16%) Query: 214 ACNHTSELFGFVKDVFQHCAPNWDFE---ALIKELDFVRKIFRGSED----ARGKKLFWK 266 C + L + K + + A F+ ++ I RG + G ++ Sbjct: 311 RCIGATTLKEYQKYIEKDAALERRFQPVYVKEPSVEETVTILRGLKGRYELHHGIRILDS 370 Query: 267 ADELIEKLKSKLID--------------------------PLDACNFILMFFQECDSDS- 299 A L ++ I P + Sbjct: 371 ALIAAATLSNRYISDRFLPDKAVDLIDEASSKMRIEIDSMPEELDRANKRIQSLKIEREA 430 Query: 300 -PSLENGEGGFLIAPQDACNEIAEVVQDTARK---MEVVAEEKMRMFKKARSVLDACDRE 355 ++ + + E T + +E +++ K+ + E Sbjct: 431 LKKEQDTASKERLKTLERDLSEQEQNFQTLKARWDLEKSKIGRLKQIKEEIEKYKNLEAE 490 Query: 356 LEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADEARRE 404 E + ++ K +ELES + + +L +E E Sbjct: 491 AERRGEINRVAEIRYGKLVDLQKELESANEELKKQESASRLLKEEVSEE 539 >gi|70726976|ref|YP_253890.1| hypothetical protein SH1975 [Staphylococcus haemolyticus JCSC1435] Length = 869 Score = 200 bits (509), Expect = 6e-50 Identities = 35/267 (13%), Positives = 83/267 (31%), Gaps = 20/267 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + ++ + + Sbjct: 247 GAKFRGEFEERLKAVLKEVKESDGRIILFIDEIHMLVGAGKTDGAMDAGNMLKPMLARGE 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + + FQ+ P +E+ ++ E+ V+ Sbjct: 307 LHCIGATTLNEYREYIEKDSALERRFQKVGVSEPDVEDTI--SILRGLKERYEVYHGVRI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + AE R A D L D+ACA ++ E +++++ V Sbjct: 365 QDRALVAAAELSDRYITDRFLPDKAID--LVDQACA--TIRTEMGSNPTELDQVNRRVMQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSK--YLKLRLSEAEERRQYLFE 444 + E + ++D A + S+ K +++ +E+R L Sbjct: 421 LEIEESALKNESDNASKHRLEELQEELSNEKEKQASLQSRVEQEKEKIANVQEKRAELDR 480 Query: 445 ELKAQENSQCDF--DPMKMRMESEIRG 469 +A E++Q + + I Sbjct: 481 SRQALEDAQTEGNLEKAAELQYGTIPQ 507 >gi|71837201|ref|ZP_00676967.1| AAA ATPase, central region:Clp, N terminal [Pelobacter propionicus DSM 2379] Length = 873 Score = 200 bits (509), Expect = 7e-50 Identities = 37/278 (13%), Positives = 85/278 (30%), Gaps = 23/278 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + I + ++ + + Sbjct: 253 GAKYRGEFEERLKAVLNEVKEGEGRIILFIDELHTIVGAGKAEGAMDAGNMLKPMLARGE 312 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ + P++E+ ++ E+ ++ Sbjct: 313 LHCIGATTLDEYRQHIEKDAALERRFQPVLVEQPTVEDT--VSILRGLRERFEVHHGIKI 370 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R + A D L D+ACA L+ E +++ + V Sbjct: 371 QDSALVAAATLSNRYITERFLPDKAID--LVDEACA--MLRTEIDSLPSELDTINRRVMQ 426 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + + D A +E ++Y + + + R+ + + Sbjct: 427 LEIEEVALKKEKDRASQERLKALRRELADDRERANAMRAQYETEKCAIQRIQGLREQIEK 486 Query: 445 ELKAQENSQCD--FDPMKMRMESEIRGLLKGM---EMT 477 E ++ D + SE+ GL K + E T Sbjct: 487 TRHDIEQAERDSNLELASKLKYSEMPGLEKALHNEEAT 524 >gi|67934490|ref|ZP_00527533.1| AAA ATPase, central region:Clp, N terminal [Solibacter usitatus Ellin6076] Length = 883 Score = 200 bits (509), Expect = 7e-50 Identities = 30/274 (10%), Positives = 74/274 (27%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + D +I +D + + + + + Sbjct: 250 GTKFRGEFEDRLKAVVKEIIDSNGEIICFIDELHTLVGAGSAEGAIDAANLLKPALARGE 309 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ PS+++ ++ EI V+ Sbjct: 310 LRCIGATTLNEYKKHVEKDAALARRFQTVMVGEPSVDDTIA--ILRGLKEKFEIHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D+A + L+++ +I+ LE + Sbjct: 368 KDSAILAAAVLSQRYIADRFLPDKAID--LIDEAGSA--LRLQIGSMPIEIDNLERRISH 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + D A + ++ + + + ++ Sbjct: 424 LEIERQALSKERDHASHDRLRHVENELESLRGEAAGLKERWSREKGAIDRVRTLKEQQDS 483 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGMEM 476 + +E + D ++ + K ++ Sbjct: 484 LRQEEEKASRAGDWEKAAQLRYGQLSQIEKDIQA 517 >gi|23128455|ref|ZP_00110302.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc punctiforme PCC 73102] Length = 880 Score = 200 bits (509), Expect = 7e-50 Identities = 36/275 (13%), Positives = 89/275 (32%), Gaps = 24/275 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + ++ +D + + ++ + + Sbjct: 258 GAKYRGEFEERLKAVLKEIQEAQGQIVLFIDEIHTVVGAGATQGSMDASNLLKPMLARGE 317 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 318 LRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTI--SILRGLKERYELHHGVKI 375 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A LKME K +++E++ + Sbjct: 376 SDSALVAAATLSARYISDRFLPDKAID--LVD--EAAAKLKMEITSKPEELDEIDRKILQ 431 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL 446 + E Q + D A RE +++ + + +R + + +E+ Sbjct: 432 LEMERLSLQKETDSASRERLERLERELAELKERQDALNAQWQAEK--QIIDRIRQIRQEI 489 Query: 447 K----AQENSQCDFDP--MKMRMESEIRGLLKGME 475 + + ++ D+D S++ L + ++ Sbjct: 490 ERVNVEIQQAERDYDLNRAAELKYSKLTELQRQLK 524 >gi|19713201|gb|AAL94040.1| ClpB protein [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 864 Score = 200 bits (508), Expect = 9e-50 Identities = 33/272 (12%), Positives = 85/272 (31%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + I + ++ + + Sbjct: 253 GAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGSLDAGNMLKPMLARGE 312 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 ++I ++ + FQ + P++++ ++ E V+ Sbjct: 313 LRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNVDDTI--SILRGLKDKFETYHGVRI 370 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R + A D L D A ++ E ++++L Sbjct: 371 TDTAIVEAATLSQRYISDRKLPDKAID--LID--EAAAMIRTEIDSMPEELDQLTRKALQ 426 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + + D+A +E TSK+ + +S+ + ++ + Sbjct: 427 LEIEIKALEKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKIKNIKREIEN 486 Query: 445 ELKAQENSQCDFDPMK--MRMESEIRGLLKGM 474 E ++ ++D K ++ L K + Sbjct: 487 VKLEMEKAEREYDLTKLSELKYGKLATLEKEL 518 >gi|11561808|gb|AAC83689.2| 101 kDa heat shock protein; HSP101 [Triticum aestivum] Length = 918 Score = 199 bits (506), Expect = 1e-49 Identities = 36/272 (13%), Positives = 83/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + ++ + + Sbjct: 252 GAKYRGEFEERLKAVLKEVEEADGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQ 311 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + FQ+ PS+ + ++ E V+ Sbjct: 312 LRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTI--SILRGLKEKYEGHHGVRI 369 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + V A+ R A D L D+ACA +++++ + +I+ LE Sbjct: 370 QDRAIVVAAQLSARYIMGRHLPDKAID--LVDEACA--NVRVQLDSQPEEIDNLERKRIQ 425 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + D+A + T KY K R+ E + +Q E Sbjct: 426 LEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQRREE 485 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + ++ D ++ ++ + + Sbjct: 486 LQFTLQEAERRMDLARVADLKYGALQEIDAAI 517 >gi|73663109|ref|YP_301890.1| putative ATPase subunit of an ATP-dependent protease [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 869 Score = 198 bits (505), Expect = 2e-49 Identities = 35/266 (13%), Positives = 89/266 (33%), Gaps = 20/266 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + + ++ + + Sbjct: 247 GAKYRGEFEERLKAVLKEVKDSDGRIILFIDEIHILVGAGKTEGAMDAGNMLKPMLARGE 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + + FQ+ + P +E+ ++ E+ V+ Sbjct: 307 LHCIGATTLNEYREYIEKDSALERRFQKVNVSEPDVEDTI--SILRGLKERYEVYHGVRI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + AE R A D L D+ACA ++ E +++++ V Sbjct: 365 QDKALVAAAELSDRYITDRFLPDKAID--LVDQACA--TIRTEMGSNPTELDQVNRRVMQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL--RLSEAEERRQYLFE 444 + E + ++D A ++ S+ + ++++ +E+R L E Sbjct: 421 LEIEESALKNESDNASKQRLQELQQELSNEKEKQNAIQSRVEEEKGKIAKLQEKRTELDE 480 Query: 445 ELKAQENSQCDF--DPMKMRMESEIR 468 KA E+++ ++ + +I Sbjct: 481 SRKALEDAENNYNLEKAAELQHGKIP 506 >gi|29608171|dbj|BAC72226.1| putative ATP-dependent Clp protease [Streptomyces avermitilis MA-4680] Length = 870 Score = 198 bits (504), Expect = 3e-49 Identities = 45/273 (16%), Positives = 83/273 (30%), Gaps = 21/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + A D +I +D + + ++ + Sbjct: 249 GAKYRGEFEERLKTVLAEIKDSDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARG 308 Query: 275 KS---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + + ++ + FQ+ PS+E+ ++ E VQ Sbjct: 309 ELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPSVEDTIA--ILRGLKGRYEAHHKVQ 366 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R A D L D A + L+ME +I+EL+ V Sbjct: 367 IADSALVAAAALSDRYITSRFLPDKAID--LVD--EAASRLRMEIDSSPVEIDELQRQVD 422 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLF 443 + E + D A RE T+++ K + S E ++ L Sbjct: 423 RLKMEELAIGKETDAASRERLEKLRRDLADKEEELRGLTARWEKEKQSLNRVGELKEKLD 482 Query: 444 EELKAQENSQCDF--DPMKMRMESEIRGLLKGM 474 E E +Q D D + EI L + + Sbjct: 483 ELRGQAERAQRDGDFDTASKLLYGEIPALERDL 515 >gi|48870729|ref|ZP_00323448.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pediococcus pentosaceus ATCC 25745] Length = 863 Score = 198 bits (504), Expect = 3e-49 Identities = 35/273 (12%), Positives = 83/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 250 GAKYRGDFEERLKAVLKEVSKSDGQIILFIDEIHTIVGAGKTEGSMDAGNLLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 LI ++ + FQ PS+E+ ++ EI V+ Sbjct: 310 LHLIGATTLDEYRENIEKDKALERRFQRVLVKEPSIEDTI--SILRGLKERFEIHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R A D L D+A A +K+E ++++++ + Sbjct: 368 HDNALVAAAKLSSRYITDRYLPDKAID--LIDEASAK--IKVEMNSNPTELDQVKRQLMR 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 Q E + ++D + S++ K + + +++ L + Sbjct: 424 LQVEERALKNESDAESVKRLKDLQKELSETKEEKVKLESRWSAQKEEIKKISDKKNELDK 483 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGME 475 + ++ +D + I L K +E Sbjct: 484 AKHDLQEAESSYDLDQAAILQHGTIPALEKELE 516 >gi|54027376|ref|YP_121618.1| putative Clp protease ATP-binding subunit [Nocardia farcinica IFM 10152] Length = 853 Score = 198 bits (503), Expect = 3e-49 Identities = 38/273 (13%), Positives = 80/273 (29%), Gaps = 21/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + +I +D + I ++ + Sbjct: 248 GAKYRGEFEERLKAVLEDIKNSAGQIITFIDELHTIVGAGATGESAMDAGNMIKPMLARG 307 Query: 275 KS---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + ++ + FQ+ PS+E+ G ++ E+ V+ Sbjct: 308 ELRLVGATTLEEYRQHIEKDAALERRFQQVLVGEPSVEDTVG--ILRGIKERYEVHHGVR 365 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R A D L D + + L+ME + +I+E+E VR Sbjct: 366 ITDSALVAAAALSDRYITSRFLPDKAID--LVD--ESASRLRMEIDSRPVEIDEVERAVR 421 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 + E + DEA + +++ + + + ++ L Sbjct: 422 RLEIEEVALSKETDEASKLRLEKLRQELADDREKLNQLMTRWQNEKSAIDQVRTLKEQLE 481 Query: 444 EELKAQENSQCDFD--PMKMRMESEIRGLLKGM 474 E ++ D D I L K + Sbjct: 482 ALRGESERAERDGDLGKAAELRYGRIPSLEKQL 514 Score = 37.2 bits (85), Expect = 0.99 Identities = 25/184 (13%), Positives = 55/184 (29%), Gaps = 41/184 (22%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSL-ENGEGGFLIAPQDACNE 319 K DE +L+ ++ + + + + + +L + + + + E Sbjct: 389 DKAIDLVDESASRLRMEIDSRPVEIDEVERAVRRLEIEEVALSKETDEASKLRLEKLRQE 448 Query: 320 IAE--------------------VVQDTARKMEVVAEEKMRMFKKARS------------ 347 +A+ V+ ++E + E R + Sbjct: 449 LADDREKLNQLMTRWQNEKSAIDQVRTLKEQLEALRGESERAERDGDLGKAAELRYGRIP 508 Query: 348 VLDACDRELEDKACAVTD--LKMERQKKKPQIEELES------IVRLKQAEADMFQLKAD 399 L+ E E + A D + ++ + I E+ S + RL + E D Sbjct: 509 SLEKQLAEAEKASGAAADGEVMLKEEVGPDDIAEVVSSWTGIPVGRLLEGETQKLLRMED 568 Query: 400 EARR 403 E R Sbjct: 569 ELGR 572 >gi|67923982|ref|ZP_00517435.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Crocosphaera watsonii WH 8501] Length = 872 Score = 197 bits (502), Expect = 4e-49 Identities = 35/280 (12%), Positives = 86/280 (30%), Gaps = 27/280 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + ++ + + Sbjct: 250 GAKYRGEFEERLKAVLKEVTDSQGNIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQE D P++ + ++ E+ V+ Sbjct: 310 LRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVVDTI--SILRGLKERYEVHHGVKI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D + LKME K +++E + + Sbjct: 368 ADTALVAAAMLSNRYISDRFLPDKAID--LVD--ESAAKLKMEITSKPEELDEADRKILQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E Q + D A RE +++ + + + + ++ + + Sbjct: 424 LEMERLSLQKEVDIASRERLQRLEKELANLKEEQSQLNAQWQAEKEVIDQIRQLKETMDQ 483 Query: 445 ELKAQENSQCDFDPMKM---------RMESEIRGLLKGME 475 + ++ D+D K ++ +++ L +E Sbjct: 484 VNLEIQQAERDYDLNKAAELRYGKLTDLQGQVKELESKIE 523 >gi|17979454|gb|AAL50064.1| At2g25140/F13D4.100 [Arabidopsis thaliana] Length = 964 Score = 197 bits (501), Expect = 6e-49 Identities = 36/274 (13%), Positives = 81/274 (29%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + I +D + + ++ + + Sbjct: 329 GAKFRGDFEERLKAVMKEVSASNGQTILFIDEIHTVVGAGAMDGAMDASNLLKPMLGRGE 388 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ PS+E+ ++ E+ V Sbjct: 389 LRCIGATTLTEYRKYIEKDPALERRFQQVLCVQPSVEDTI--SILRGLRERYELHHGVTI 446 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R + A D L D+A A LKME K +++ ++ V Sbjct: 447 SDSALVSAAVLADRYITERFLPDKAID--LVDEAGAK--LKMEITSKPTELDGIDRAVIK 502 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQY 441 + E + D+A +E ++ K ++ +E Sbjct: 503 LEMEKLSLKNDTDKASKERLQKIENDLSTLKQKQKELNVQWEKEKSLMTKIRSFKEEIDR 562 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + E+++ E D + + L + +E Sbjct: 563 VNLEIESAEREY-DLNRAAELKYGTLLSLQRQLE 595 >gi|7380324|emb|CAB84911.1| ClpB protein [Neisseria meningitidis Z2491] Length = 859 Score = 197 bits (501), Expect = 6e-49 Identities = 34/271 (12%), Positives = 79/271 (29%), Gaps = 20/271 (7%) Query: 217 HTSELFGFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D + +D + + + + + + Sbjct: 248 GAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ PS+E+ ++ EI + Sbjct: 308 LHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIA--ILRGLQERYEIHHGIDI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + AE R A D L D A + +KME++ K +++++ + Sbjct: 366 TDPAIVAAAELSDRYITDRFLPDKAID--LID--EAASRVKMEKETKPEAMDKIDRRLIQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFE 444 + E + + D+A ++ + + A ++ + E Sbjct: 422 LRMEKAHVEKEKDDASKKRLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDE 481 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKG 473 E ++ D M ++ L K Sbjct: 482 VKIKIEQAKRQGDLALASKLMYEDLEHLEKQ 512 >gi|68178655|ref|ZP_00551766.1| IMP dehydrogenase/GMP reductase:AAA ATPase, central region:Clp, N terminal [Desulfuromonas acetoxidans DSM 684] Length = 866 Score = 197 bits (500), Expect = 7e-49 Identities = 30/272 (11%), Positives = 79/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + I + ++ + + Sbjct: 252 GAKYRGEFEERLKAVLNEIRSSDGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGE 311 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ P++E+ ++ E+ V+ Sbjct: 312 LHCIGATTLDEYRSHIEKDAALERRFQPVMVTQPTVEDSI--SILRGLKERFEVHHGVKI 369 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R + A D L D+ACA ++ E ++ V Sbjct: 370 QDQALVAAATLSQRYISERFLPDKAID--LVDEACA--MVRTEIDSMPAAMDTAARRVMQ 425 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E + D A +E + +++ + L + ++ R+ + + Sbjct: 426 LEIEEAALVKEKDAASKERLKALQEELAEQKHIVDSFRAQWDVEKAGLQKIQQLREQIEQ 485 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGM 474 ++ D+D + L + + Sbjct: 486 ANLQLAAAERDYDLNTAAEIRHGRLPQLEQQL 517 >gi|6013196|gb|AAF01280.1| heat shock protein 101 [Triticum aestivum] Length = 913 Score = 197 bits (500), Expect = 7e-49 Identities = 34/272 (12%), Positives = 81/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + ++ + + Sbjct: 251 GAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQ 310 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + FQ+ PS+ + ++ E V+ Sbjct: 311 LRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDT--VSILRGLKEKYEGHHGVRI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + + A+ R A D L D+ACA +++++ + +I+ LE Sbjct: 369 QDRALVIAAQLSSRYIMGRHLPDKAID--LVDEACA--NVRVQLDSQPEEIDNLERKRIQ 424 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + D+A + KY K R+ E +Q E Sbjct: 425 LEVELHALEKEKDKASKARLVDVRKELDDLRDKLQPLQMKYRKEKERIDEIRSLKQRREE 484 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 + ++ D ++ ++ + + Sbjct: 485 LQFTLQEAERRMDLARVADLRYGALQEVDAAI 516 >gi|22535406|emb|CAC87117.1| heat shock protein 101 [Oryza sativa (japonica cultivar-group)] Length = 912 Score = 196 bits (499), Expect = 1e-48 Identities = 32/268 (11%), Positives = 77/268 (28%), Gaps = 20/268 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + ++ + + Sbjct: 251 GAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQ 310 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + FQ+ PS+ + ++ E V+ Sbjct: 311 LRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDTI--SILRGLKEKYEGHHGVRI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + V A+ R A D A +++++ + +I+ LE Sbjct: 369 QDRALVVAAQLSARYIMGRHLPDKAID----LVGEARANVRVQLDSQPEEIDNLERKRIQ 424 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + E + + D+A + T KY K R+ E + +Q E Sbjct: 425 LEVEHHALEKEKDKASKARLVEVKKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQRREE 484 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGL 470 + ++ D ++ ++ + Sbjct: 485 LQFTLQEAERRMDLARVADLKYGALQEI 512 >gi|6320464|ref|NP_010544.1| Oligomeric mitochondrial matrix chaperone that cooperates with Ssc1p in mitochondrial thermotolerance after heat shock; prevents the aggregation of misfolded matrix proteins; component of the mitochondrial proteolysis system; Hsp78p [Saccharomyces cerevisiae] Length = 811 Score = 196 bits (499), Expect = 1e-48 Identities = 39/274 (14%), Positives = 82/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D V + + + + Sbjct: 185 GAKYRGEFEERLKKVLEEIDKANGKVIVFIDEVHMLLGLGKTDGSMDASNILKPKLARG- 243 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ + PS+ + ++ E+ V+ T Sbjct: 244 LRCISATTLDEFKIIEKDPALSRRFQPILLNEPSVSDTI--SILRGLKERYEVHHGVRIT 301 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D+ACA L+++ + K +I++L+ + Sbjct: 302 DTALVSAAVLSNRYITDRFLPDKAID--LVDEACA--VLRLQHESKPDEIQKLDRAIMKI 357 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 Q E + + + D E T + R + + + L + Sbjct: 358 QIELESLKKETDPVSVERREALEKDLEMKNDELNRLTKIWDAERAEIESIKNAKANLEQA 417 Query: 446 LKAQENSQCDFD--PMKMRMESEIRGLLKGMEMT 477 E Q + D S I L K + ++ Sbjct: 418 RIELEKCQREGDYTKASELRYSRIPDLEKKVALS 451 >gi|50955821|ref|YP_063109.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 734 Score = 196 bits (498), Expect = 1e-48 Identities = 37/269 (13%), Positives = 77/269 (28%), Gaps = 20/269 (7%) Query: 220 ELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKL 278 F + + +I +D + + ++ + + +L Sbjct: 125 YRGQFEERLKAVLKEIDAAEGRIITFVDELHILMGAGGGEGSVAASNMLKPMLARGELRL 184 Query: 279 IDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTAR 329 I ++ + FQ+ PS+E+ ++ E V Sbjct: 185 IGATTLDEYREFIEKDAALERRFQQVYVGEPSVEDTVA--ILRGLKGRYEAHHGVTIEDS 242 Query: 330 KMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQA 389 + A R + A D L D A + LKME +I+ L+ V + Sbjct: 243 ALVAAASLSNRYITARQLPDKAID--LID--EAASRLKMEIDSAPVEIDTLQRQVERIKL 298 Query: 390 EADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELK 447 E + + D A +E ++ + + E R L E Sbjct: 299 EEFALKKEKDAASKERLEQLRQRLGEQQRELTELQERWWSEKAALTRVGELRSQLDEAKT 358 Query: 448 AQENSQCD--FDPMKMRMESEIRGLLKGM 474 A++ + D + I + + + Sbjct: 359 ARDLALRDGRYQEASRIEYETIPNIEREL 387 >gi|67931988|ref|ZP_00525140.1| AAA ATPase, central region:Clp, N terminal [Solibacter usitatus Ellin6076] Length = 869 Score = 196 bits (498), Expect = 1e-48 Identities = 31/272 (11%), Positives = 75/272 (27%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + + ++ + + Sbjct: 243 GAKYRGEFEERLKAVLKEVLDAAGEIILFIDELHTVVGAGKTEGSMDAGNLLKPMLARGE 302 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ D PS+E+ ++ E+ V+ Sbjct: 303 LHCIGATTLDEYRKYIEKDAALARRFQPVMVDQPSVEDTI--SILRGLKERYEVHHGVRI 360 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D + L+ E +++E + Sbjct: 361 KDAALVAAAVLSDRYITDRFLPDKAID--LVD--ESAARLRTEIDSMPVELDETRRRIMQ 416 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL 446 + E + + + D+A +E +++ + R E Sbjct: 417 LEIEREALRKEKDKASKERLTKLEKELADLKAESDELMARWQAEKDEVQRLRTLREQVEQ 476 Query: 447 KAQE--NSQCDFDP--MKMRMESEIRGLLKGM 474 E ++ +D ++ L + + Sbjct: 477 TKLEIGQAERQYDLNRAAELKYGKLAQLERQL 508 >gi|42527829|ref|NP_972927.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Treponema denticola ATCC 35405] Length = 859 Score = 195 bits (496), Expect = 2e-48 Identities = 32/274 (11%), Positives = 78/274 (28%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + Sbjct: 248 GAKFRGEFEERLKAVISEVQKSEGRVILFIDELHTLVGAGASEGSMDASNLLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ P++E+ ++ E+ V+ Sbjct: 308 LRAIGATTLNEYRKYIEKDAALERRFQQVYCPEPTVEDTIA--ILRGLQEKYEVHHGVRI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A + LKME + + +++++E + Sbjct: 366 RDEALIAAAVLSNRYITNRFLPDKAID--LVD--EAASRLKMEIESQPVELDQVERKILQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFE 444 E + D A +E +++ + E R ++ L + Sbjct: 422 LNIEKVSIGKENDTASKERLLKLEEELAELSSKRNAMQAQWQNEKARINESRKYKEELEQ 481 Query: 445 ELKAQENSQCDF--DPMKMRMESEIRGLLKGMEM 476 + + + +I L K + Sbjct: 482 LRIEETKYSREGNLNKAAELKYGKIPELEKKIAA 515 >gi|29376856|ref|NP_816010.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Enterococcus faecalis V583] Length = 868 Score = 195 bits (496), Expect = 2e-48 Identities = 29/267 (10%), Positives = 78/267 (29%), Gaps = 20/267 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 250 GAKFRGEFEERLKAVLKEVKKSDGKIILFIDEIHNIVGAGKTEGSMDAGNLLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 LI ++ + FQ+ P++E+ ++ EI V Sbjct: 310 LHLIGATTLDEYRQYMEKDKALERRFQKVLVKEPTVEDTI--SILRGLKERFEIHHGVNI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D+A A +++E +++++ + Sbjct: 368 HDNALVAAATLSDRYITDRFLPDKAID--LVDEASA--TIRVEMNSMPTELDQVTRRLMQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLFE 444 + E + ++D+A ++ ++ + +R + + Sbjct: 424 LEIEEAALKKESDDASKKRLANLQEELADLREEANSMKMQWETEKEEVNAVSNKRAEIDK 483 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRG 469 E+++ ++D + I Sbjct: 484 AKHELEDAENNYDLERAAVLRHGTIPQ 510 >gi|29610907|dbj|BAC74952.1| putative ATP-dependent Clp protease [Streptomyces avermitilis MA-4680] Length = 879 Score = 195 bits (496), Expect = 2e-48 Identities = 35/274 (12%), Positives = 82/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + ++ +D + + ++ + + Sbjct: 253 GAKYRGEFEERLKAVLSEVKAAEGRILLFVDELHTVVGAGAAEGAMDAGNMLKPMLARGE 312 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 +I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 313 LHMIGATTLDEYRKHIEKDAALERRFQQVLVDEPSVEDTI--SILRGLRERLEVFHGVKI 370 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D+ACA L+ E +++E+ V Sbjct: 371 QDTALVSAATLSHRYITDRFLPDKAID--LVDEACA--RLRTEIDSMPAELDEITRRVTR 426 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 + E ++D A + +++ R + +E RQ L + Sbjct: 427 LEIEEAALSKESDPASKTRLEELRRELADLRGEADAKHAQWEAERQAIRRVQELRQELEQ 486 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 E ++ +D ++ L + + Sbjct: 487 VRHEAEEAERAYDLNRAAELRYGRLQDLERRLAA 520 >gi|44983280|gb|AAS52462.1| AEL223Cp [Ashbya gossypii ATCC 10895] Length = 803 Score = 195 bits (495), Expect = 2e-48 Identities = 38/271 (14%), Positives = 80/271 (29%), Gaps = 20/271 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D V + + + K Sbjct: 173 GAKYRGEFEERLKSVLDEIDKSEGQVIVFIDEVHMLLGLGKTDGSMDASNILKPRLAKG- 231 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D PS+ + ++ E+ V+ T Sbjct: 232 MRCISATTFDEFKIIEKDPALTRRFQPVILDEPSVSDTI--SILRGLKERYEVHHGVRIT 289 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D+ACA L+++ + K I+ ++ + Sbjct: 290 DTAIVSAAVLSNRYINDRFLPDKAID--LVDEACA--VLRLQHESKPDSIQAIDRAIMTM 345 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 + E + + + D E T + K + + + + L + Sbjct: 346 EIELESLRKEEDPVSLERADALKKSLKEKNDELEKLTKVWDKEKKEIEAIKSAKATLEQA 405 Query: 446 LKAQENSQCDFD--PMKMRMESEIRGLLKGM 474 E +Q + D ++I L K + Sbjct: 406 KIDLEIAQREGDYGKASELRYAKIPQLEKTI 436 >gi|71363823|ref|ZP_00654425.1| AAA ATPase, central region:Clp, N terminal [Psychrobacter cryohalolentis K5] Length = 865 Score = 195 bits (495), Expect = 3e-48 Identities = 30/272 (11%), Positives = 79/272 (29%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQH-CAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 245 GAKFRGEFEERLKAVLSDLSKQEGNVILFIDELHTLVGAGKADGAMDAGNMLKPALARGE 304 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ E+ V Sbjct: 305 LHCVGATTLDEYRKYIEKDAALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHGVDI 362 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R + A D L D A + L+ME K + +L+S + Sbjct: 363 QDSAIIAAARMSHRYITDRKLPDKAID--LID--EAASRLRMEMDSKPESLGKLDSRLIQ 418 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFE 444 + + ++ + + D + + + +++ + L + Sbjct: 419 LKMQREVLKNEEDAGAQAERKVLDAQIEELEKEYADLNEIWQAEKALVKGSQQLKDELDK 478 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGM 474 A + + + D M I L + + Sbjct: 479 ARIAYDKASREGDYEIMSKLQYETIPQLERRI 510 >gi|3560150|emb|CAA20737.1| SPBC4F6.17c [Schizosaccharomyces pombe] Length = 803 Score = 195 bits (495), Expect = 3e-48 Identities = 33/271 (12%), Positives = 82/271 (30%), Gaps = 20/271 (7%) Query: 216 NHTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL 274 + F + + + +I +D + + + + + Sbjct: 180 SGAKFRGDFEERLKSVLSDLEGAEGKVILFVDEMHLLLGFGKAEGSIDASNLLKPALARG 239 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 K ++ + FQ + PS+ + ++ E+ V+ Sbjct: 240 KLHCCGATTLEEYRKYIEKDAALARRFQAVMVNEPSVADTI--SILRGLKERYEVHHGVR 297 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R A D L D+AC + L+++++ K ++ L+ + Sbjct: 298 ITDDALVTAATYSARYITDRFLPDKAID--LVDEAC--SSLRLQQESKPDELRRLDRQIM 353 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 Q E + + + D E ++ + + R L ++ + L Sbjct: 354 TIQIELESLRKETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELE 413 Query: 444 EELKAQENSQCDFD--PMKMRMESEIRGLLK 472 + E +Q + + + I L + Sbjct: 414 QARIELERTQREGNYARASELQYAIIPELER 444 >gi|65303851|emb|CAI76228.1| ClpB protein, putative [Theileria annulata] Length = 1150 Score = 194 bits (494), Expect = 4e-48 Identities = 29/284 (10%), Positives = 75/284 (26%), Gaps = 34/284 (11%) Query: 220 ELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKL 278 F + + + ++ +D + + E ++ + + + Sbjct: 397 YRGEFEERLKEILNEIENSQGEIVMFIDEIHTLVGAGESQGSLDAGNILKPMLARGELRC 456 Query: 279 ID---------PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTAR 329 I ++ + FQ D P++E ++ E+ V+ Sbjct: 457 IGATTLQEYRQKIEKDKALERRFQPIYIDEPNIEETI--NILRGLKERYEVHHGVRILDS 514 Query: 330 KMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQA 389 + R A D L D A LK++ K Q++ +E + + Sbjct: 515 TLIQAVLLSNRYITDRYLPDKAID--LID--EAAAKLKIQLSSKPLQLDIIERKLLQLEM 570 Query: 390 EADMF-----------QLKADEAR---REAEXXXXXXXXXXXXXXXXYTSKYLKLRL--S 433 E + + + + + +LK + Sbjct: 571 EKISIINDNDNIGILSKNEKENLKPNDKLRLQNIDNLVNELTKQKDELNEMWLKEKSLVD 630 Query: 434 EAEERRQYLFEELKAQENSQCDFDP--MKMRMESEIRGLLKGME 475 ++ + + ++ DFD + L ++ Sbjct: 631 NIRNIKERIDIVKIEIDKAERDFDLNHAAELRFETLPDLENQLK 674 >gi|68246595|gb|EAN28691.1| AAA ATPase, central region:Clp, N terminal [Magnetococcus sp. MC-1] Length = 903 Score = 194 bits (493), Expect = 5e-48 Identities = 36/272 (13%), Positives = 74/272 (27%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + I + + + Sbjct: 292 GAKYRGEFEERLKAVIKEVQEAQGKIILFIDEMHTIVGAGQSEGAMDAGNLLKPALARGD 351 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ PS+E ++ E+ V+ Sbjct: 352 LHCVGATTLDEYRKHVEKDPALERRFQPVQVREPSVEATI--SILRGIKDKYELHHGVRI 409 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D A ++ME K ++ L+ + Sbjct: 410 TDAAIVAAATLAHRYISDRFLPDKAID--LVD--EAAARIRMEITSKPQVLDSLDRQILQ 465 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFE 444 Q E + D A RE T ++ + RL+ + ++ L Sbjct: 466 LQIEQSALSKEKDSASRERLTKLEAELADLKENAHAMTIRWEQERLNIKQVGILKETLES 525 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKGM 474 E ++ + K + L + + Sbjct: 526 TRLQLEQAERSGNLEKAGELRYGTLPKLEQEL 557 >gi|33240532|ref|NP_875474.1| ATPase with chaperone activity ATP-binding subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 864 Score = 193 bits (491), Expect = 8e-48 Identities = 31/274 (11%), Positives = 84/274 (30%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + ++ + + Sbjct: 249 GAKYRGEFEERLKAVLKEVTSSQGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGE 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ PS+E+ ++ E+ V+ Sbjct: 309 LRCIGATTINEHRQHIEKDPALERRFQQVLISEPSIEDTI--SILRGLKEKYEVHHGVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R + A D L D + + LKME K +++E++ + Sbjct: 367 SDSALVAAAVLSNRYISERYLPDKAID--LID--ESASKLKMEITSKPEELDEIDRKIIQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 Q E + +++ A +E ++ + + LS +E + Sbjct: 423 LQMEKLSLKRESNLASQEKLNAIDNGLNELKSKQSSLNKQWQEEKESINTLSFLKEEIEK 482 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + +++ + D + + L ++ Sbjct: 483 VQLQIEQAKRDY-DLNRAAELEYGTLNSLQNKLK 515 >gi|70800165|gb|AAZ10006.1| serine peptidase, putative [Leishmania major strain Friedlin] Length = 817 Score = 193 bits (491), Expect = 8e-48 Identities = 37/274 (13%), Positives = 78/274 (28%), Gaps = 21/274 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 F + + +I +D + + + + Sbjct: 189 GAKFRGEFEERLKGVLKDTIESHGKVILFIDELHTLVGAGSSGDGSMDAANLLKPSLARG 248 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + I ++ + FQ P++E ++ E Sbjct: 249 ELHCIGATTLDEYRQHIEKDAALARRFQSVLVTEPTVEETI--SILRGIKEKYEAHHGCL 306 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R + R A D L D A + L+++++ K ++ +E + Sbjct: 307 IKDEALVYAAVNSHRYLSERRLPDKAID--LID--EAASRLRLQQESKPEALDLIERELI 362 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLF 443 + EA+ + DE +E ++ K + ++R + L Sbjct: 363 RLKIEAEAVKKDKDEVGKEKLENLYEQISQKQKEYDALEERWKKEKNLFQTIKQRTEELD 422 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E + D K S+I LLK +E Sbjct: 423 VLRHHLEQAMNSGDFAKAGEIQHSQIPNLLKQIE 456 >gi|33861137|ref|NP_892698.1| ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 860 Score = 192 bits (488), Expect = 2e-47 Identities = 37/276 (13%), Positives = 83/276 (30%), Gaps = 24/276 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + ++ + + Sbjct: 246 GAKYRGEFEERIKNVLKKVKSSEGKIILFIDEIHTVVGAGATGGSLDASNLLKPMLARGE 305 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ ++PS+++ ++ E+ V+ Sbjct: 306 LRCIGATTINEHKQNIEKDPALERRFQKIKINAPSVDDTI--SILRGLREKYEVHHSVRI 363 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R A D L D A + L M K +I+E++ V Sbjct: 364 SDNALVAAASLSERYINDRFLPDKAID--LID--EAASRLNMIITSKPEEIDEIDRKVLQ 419 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL 446 + E Q ++D E ++ K + E + L EE+ Sbjct: 420 LEMENLSLQRESDNFSLERLKRINNELHDLKIRQSELNHQWQKEK--EEIDEISNLKEEI 477 Query: 447 K----AQENSQCDFD--PMKMRMESEIRGLLKGMEM 476 + E ++ FD + L K +++ Sbjct: 478 ESTQLKIEQAKRSFDLNKAAELEFGTLISLQKKLKI 513 >gi|70799667|gb|AAZ09583.1| Serine peptidase, putative [Leishmania major strain Friedlin] Length = 867 Score = 192 bits (488), Expect = 2e-47 Identities = 42/272 (15%), Positives = 83/272 (30%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + L+ + + Sbjct: 247 GAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKPLLARGE 306 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + F PS+E E ++ E VQ Sbjct: 307 LRTIGATTLEEYRQYVEKDAAFERRFMPVQVHEPSVE--ECTSILRGLKDRYEQHHGVQI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + + V A+ R A D L D+ACA ++++ + +I+ LE R Sbjct: 365 TDKAVVVAAQLAGRYITNRFLPDKAID--LIDEACA--NVRVTLSSRPAEIDALERKKRQ 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL--RLSEAEERRQYLFE 444 + E Q D + +E +KY + R+ E + + L E Sbjct: 421 LEIEERALQRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDE 480 Query: 445 ELKAQENSQ--CDFDPMKMRMESEIRGLLKGM 474 + E ++ D + + I L + Sbjct: 481 KKVKLERAERMRDMETAADLKYNVIPILQDRI 512 >gi|33945097|ref|XP_340696.1| heat shock protein 100 [Trypanosoma brucei] Length = 870 Score = 191 bits (486), Expect = 3e-47 Identities = 43/268 (16%), Positives = 82/268 (30%), Gaps = 20/268 (7%) Query: 221 LFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 F + + + +I +D + + + ++ + + + I Sbjct: 251 RGEFEERLKSVLNEVKESSNGVILFIDEIHLVLGAGKSGGSMDAANLLKPMLARGELRTI 310 Query: 280 DPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + F PS+E ++ E VQ T Sbjct: 311 GATTLEEYRTYVEKDAAFERRFMPVYVTEPSVEECI--SILRGLKDRYEAHHGVQITDNA 368 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + V A+ R A D L D+ACA +++++ + I+ LE R + E Sbjct: 369 VVVAAQLANRYITNRFMPDKAID--LIDEACA--NVRVQLSSRPEAIDILERKKRQLEIE 424 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEELKA 448 A + + A RE SKY + R+ E +E + L E+ Sbjct: 425 AKALERDKEAASRERLKLVKADIQRVEEELQPLVSKYNDERQRIDELQEMQSRLDEKKNK 484 Query: 449 QENSQCDF--DPMKMRMESEIRGLLKGM 474 E + D D + I + + Sbjct: 485 LERAVRDGKMDLAADLQYNVIPLIQDRI 512 >gi|53712497|ref|YP_098489.1| endopeptidase Clp ATP-binding chain B [Bacteroides fragilis YCH46] Length = 862 Score = 190 bits (482), Expect = 8e-47 Identities = 34/276 (12%), Positives = 74/276 (26%), Gaps = 25/276 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 246 GAKYKGEFEERLKSVVNEVKKSEGNIILFIDEIHTLVGAGKGEGAMDAANILKPALARGE 305 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ D P +N ++ E V+ Sbjct: 306 LRSIGATTLDEYQKYFEKDKALERRFQIVQVDEP--DNLSTISILRGLKERYENHHHVRI 363 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + E R A D L D A L+ME ++E+ ++ Sbjct: 364 KDDAIIAAVELSSRYITDRFLPDKAID--LMD--EAAAKLRMEVDSVPEGLDEISRKIKQ 419 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E + + + DE Y +K+ + + + + + Sbjct: 420 LEIEREAIKRENDE---PKLQTIGKELAELKEQEKSYKAKWQSEKSLMDIIQQNKVEIEN 476 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 L E E + +++ L K +E T Sbjct: 477 LKFEADKAEREGNYG-KVAEIRYGKLQELHKEIEDT 511 >gi|33944507|ref|XP_340401.1| mitochondrial heat shock protein 78, putative [Trypanosoma brucei] Length = 812 Score = 190 bits (482), Expect = 9e-47 Identities = 32/275 (11%), Positives = 77/275 (28%), Gaps = 21/275 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 F + + +I +D + + + + Sbjct: 183 GAKFRGEFEERLKGVLKDTIESQGKVILFIDELHTLVGAGASGDGSMDAANLLKPSLARG 242 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + ++ + FQ P++E ++ E Sbjct: 243 ELHCVGATTLDEYKRHIEKDAALARRFQSVLVTEPTVEETI--SVLRGIKEKYEAHHGCL 300 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R + R A D L D A + L+++++ K Q++ + + Sbjct: 301 IKDEALVYAAVNSHRYLSERRLPDKAID--LID--EAASRLRLQQESKPEQLDSVGRELV 356 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLF 443 + EA+ + DE + ++ K + ++R + L Sbjct: 357 RLKIEAEAVKKDKDELGKAKLTQLYNRIEERQKEYDALEERWKKEKAMFDRIKKRTEDLD 416 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E ++ + D K + I L K ++ Sbjct: 417 VLRHHYEQARTEGDFAKASEILHGRIPALKKEIDA 451 >gi|50309407|ref|XP_454711.1| unnamed protein product [Kluyveromyces lactis] Length = 825 Score = 190 bits (482), Expect = 9e-47 Identities = 35/270 (12%), Positives = 77/270 (28%), Gaps = 20/270 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D V + + + + Sbjct: 197 GAKYRGEFEERLKNVLDEIDKSNGKIIVFIDEVHMLLGLGKTDGSMDASNILKPRLARG- 255 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ + PS+ + ++ E+ V+ T Sbjct: 256 LRCISATTLDEFKIIEKDPALTRRFQPIILNEPSVHDTI--SILRGLKEKYEVHHGVRIT 313 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D+ACA L+++ + K I+ ++ V Sbjct: 314 DSALVSAAVLSNRYINDRFLPDKAID--LVDEACA--VLRLQHESKPDSIQAIDRAVMTM 369 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE--AEERRQYLFEE 445 Q E + + + D E T + + + ++ L + Sbjct: 370 QIELESLKKETDPVSVERREELEKDLEVKKKELERLTEIWETEKSELDSIKTAKEDLDKL 429 Query: 446 LKAQENSQCDFD--PMKMRMESEIRGLLKG 473 + Q + D ++I L + Sbjct: 430 RTELDICQREGDYAKASELRYAKIPELERK 459 >gi|71661302|ref|XP_817674.1| ATP-dependent Clp protease subunit, heat shock protein 78, putative [Trypanosoma cruzi] Length = 802 Score = 189 bits (480), Expect = 1e-46 Identities = 33/275 (12%), Positives = 77/275 (28%), Gaps = 21/275 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 F + + +I +D + + + + Sbjct: 173 GAKYRGEFEERLKGVLKDTIEAQGKIILFIDELHTLVGAGASGDGSMDAANLLKPSLARG 232 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + ++ + FQ P++E ++ E Sbjct: 233 ELHCVGATTLDEYRRHIEKDAALARRFQSVLVTEPTVEETI--SVLRGIKEKYEAHHGCL 290 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R R A D L D A + L+++++ K Q++ +E + Sbjct: 291 IKDEALVYAAVNSHRYLSDRRLPDKAID--LID--EAASRLRLQQESKPEQLDSVERELV 346 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLF 443 + E + + DE + +++ K + ++R + L Sbjct: 347 RLKIEVEAVKKDKDELGKAKLEHLYARIAERQDEYDALEARWKKEKAMFERIKQRTEDLD 406 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E ++ + D K + I L K +E Sbjct: 407 VLRHQYEQARTEGDFAKASEILHGRIPTLKKEIEA 441 >gi|67940377|ref|ZP_00532807.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chlorobium phaeobacteroides BS1] Length = 863 Score = 188 bits (479), Expect = 2e-46 Identities = 30/274 (10%), Positives = 73/274 (26%), Gaps = 23/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + + + + + Sbjct: 246 GAKYKGEFEERLKSVVKEVIDSDGEIILFIDEIHTLVGAGKSEGAMDAANILKPALARGE 305 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ + P + ++ E V+ Sbjct: 306 LRAIGATTLKEYQKFFEKDKALERRFQIVMVNEP--DTLSAVSILRGLKERYESHHKVRI 363 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + E R A D L D A + LK+E ++E +E VR Sbjct: 364 KDEAIVAAVELSQRYITDRFLPDKAID--LID--EAASKLKLEINSLPEELEIVERRVRQ 419 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL 446 + E + + + D + +++ + + + + E Sbjct: 420 LEIEREAIKREHD---QLKLDVISQELANLNEIRTDLRARWQAEKDLVDKIQMKKADIET 476 Query: 447 KAQ--ENSQCDFD--PMKMRMESEIRGLLKGMEM 476 E ++ + D + +++ E Sbjct: 477 LKLDAERAEREGDYGRVAEIRYGKLQQAEADTEA 510 >gi|67921632|ref|ZP_00515150.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Crocosphaera watsonii WH 8501] Length = 887 Score = 187 bits (476), Expect = 4e-46 Identities = 39/282 (13%), Positives = 84/282 (29%), Gaps = 28/282 (9%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + +I +D + + ++ + Sbjct: 250 GAKLRGQFEERLQAVMREVTNSDGHIILFIDELHNVVGTGSREGSSMDAGNLLKPMLARG 309 Query: 275 KSKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + I + + FQ+ PS+++ ++ E+ V+ Sbjct: 310 ELRCIGATTLDEYRKHVEKDPALERRFQQVYVKQPSVDDTI--SILRGLKERYEVHHGVK 367 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R A D L D A LKME K ++E+++ + Sbjct: 368 ITDSALVAAATLSNRYITDRFLPDKAID--LVD--EAAAKLKMEITSKPVELEDVDRRLM 423 Query: 386 LKQAEADMFQLKA-------DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAE 436 Q E + + D++ +E S++ + L E Sbjct: 424 QLQMEKLSLEGEEERGMLVVDKSSKERLEKIQQEIKELEQIHEKLGSQWQSEKQMLEEIN 483 Query: 437 ERRQYLFEELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 ++ + E ++ D+D K E+ GL + +E Sbjct: 484 SLKEQEEQLRHQIEQAERDYDLNKAAQLKYGELEGLQRQLEA 525 Score = 48.0 bits (113), Expect = 5e-04 Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 9/154 (5%) Query: 261 KKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEI 320 K DE KLK ++ + + + SLE E ++ + E Sbjct: 391 DKAIDLVDEAAAKLKMEITSKPVELEDVDRRLMQLQMEKLSLEGEEERGMLVVDKSSKER 450 Query: 321 AEVVQDTARKMEVVAEE------KMRMFKKARSVLDACDRELEDKACAVTD---LKMERQ 371 E +Q +++E + E+ + + + L + +L + L Q Sbjct: 451 LEKIQQEIKELEQIHEKLGSQWQSEKQMLEEINSLKEQEEQLRHQIEQAERDYDLNKAAQ 510 Query: 372 KKKPQIEELESIVRLKQAEADMFQLKADEARREA 405 K ++E L+ + K+ + Q + + RE Sbjct: 511 LKYGELEGLQRQLEAKETQLIDIQAQGETLLREQ 544 >gi|68209799|ref|ZP_00561666.1| AAA ATPase, central region:Clp, N terminal [Methanococcoides burtonii DSM 6242] Length = 869 Score = 187 bits (476), Expect = 4e-46 Identities = 34/274 (12%), Positives = 78/274 (28%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + I ++ + + Sbjct: 250 GAKFRGEFEERLKAVLKEVADSEGQIILFIDELHTIVGAGATEGAMDAGNLLKPMLARGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + F D P +EN ++ E+ V+ Sbjct: 310 LHCIGATTLDEYRKYIEKDAALERRFLPVLVDQPDVENTI--SILRGLKEKYEVHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A R A D L D A ++ K +++E + + Sbjct: 368 KDTALVAAAVLSNRYISDRFLPDKAID--LVD--EAAAKVRTAIDSKPSELDEADRKILQ 423 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA-----EERRQY 441 + E + + + D +E +K+ + + A +++ + Sbjct: 424 LEIEREALKKEKDAVSKERVADLEKELADIRAESDAMRAKWQSEKDTIANLGSLKQQIED 483 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 + +L+ ENS DF+ + L + Sbjct: 484 IKIQLELAENSG-DFELASKLKYGSLTPLEHQYK 516 >gi|17131414|dbj|BAB74021.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120] Length = 880 Score = 187 bits (476), Expect = 5e-46 Identities = 34/277 (12%), Positives = 76/277 (27%), Gaps = 23/277 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKL 274 F + ++ +D + + ++ + Sbjct: 250 GAKYRGEFEDRLKAVLREVTESNGNIVLFIDELHTVVGTGSNQQGAMDAGNLLKPMLARG 309 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + I ++ + FQ+ D PS+EN ++ E+ V+ Sbjct: 310 ELRCIGATTLDEFRKFIEKDAALERRFQQVYVDQPSVENTI--SILRGLKERYEVHHNVK 367 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + + A R A D L D A LKME K +E ++ + Sbjct: 368 ISDSALVAAATLSARYIADRFLPDKAID--LVD--EAAAQLKMEITSKPADLEAIDRRLM 423 Query: 386 LKQAEADMFQLKADEAR--REAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQY 441 + E + A +E +++ + L ++ Sbjct: 424 QLEMEKLSLAGEEKVAAPTKERLQRIELEITNLTEKQQDLNNQWQGEKQVLEAISLLKKE 483 Query: 442 LFEELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E ++ +D K ++ G+ + E Sbjct: 484 EDALRVQIEQAERAYDLNKAAQLKYGKLEGVQRDREA 520 >gi|4481954|emb|CAB38512.1| SPBC16D10.08c [Schizosaccharomyces pombe] Length = 905 Score = 187 bits (476), Expect = 5e-46 Identities = 43/274 (15%), Positives = 84/274 (30%), Gaps = 21/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 + F + + + E +I +D + + G ++ + Sbjct: 251 GSKFRGEFEERIKSVLKEVEESETPIILFVDEMHLLMGAGSGGEGGMDAANLLKPMLARG 310 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 K I ++ FQ PS+E+ ++ E+ V Sbjct: 311 KLHCIGATTLAEYKKYIEKDAAFERRFQIILVKEPSIEDTI--SILRGLKEKYEVHHGVT 368 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + R + A R R A D L D A +++ R+ + ++ LE +R Sbjct: 369 ISDRALVTAAHLASRYLTSRRLPDSAID--LVD--EAAAAVRVTRESQPEVLDNLERKLR 424 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLF 443 + E + + DEA +E KY + E ++ ++ L Sbjct: 425 QLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLD 484 Query: 444 EELKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 E E+++ D I L K +E Sbjct: 485 ELKAKAEDAERRNDFTLAADLKYYGIPDLQKRIE 518 >gi|50294636|ref|XP_449729.1| unnamed protein product [Candida glabrata] Length = 787 Score = 187 bits (475), Expect = 5e-46 Identities = 35/274 (12%), Positives = 86/274 (31%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D V + + + + Sbjct: 162 GAKYRGEFEERLKKVLEDIDKADGKVIVFIDEVHMLLGLGKTDGSMDASNILKPKLARG- 220 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ + PS+++ ++ E+ V+ T Sbjct: 221 LRCISATTIDEFKIIEKDPALTRRFQPILLNEPSVQDTI--SILRGLKERYEVHHGVRIT 278 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D+ACA L+++ + K +I+ L+ + Sbjct: 279 DTALVSAAVLSNRYINDRFLPDKAID--LVDEACA--VLRLQHESKPDEIQRLDRAIMKI 334 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEE 445 Q E + + + D E + T + + + + + + L + Sbjct: 335 QIELESLKKETDPVSIERKEDLEKELERKNEELQRLTKIWEEEKAEIESIKNSKADLEKA 394 Query: 446 LKAQENSQCDFD--PMKMRMESEIRGLLKGMEMT 477 + Q + D ++I L + ++++ Sbjct: 395 RIELDRCQREGDYAKASELRYAKIPALEEKVKLS 428 >gi|6967978|emb|CAB75146.1| ATP-dependent CLP protease ATP-binding subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 857 Score = 187 bits (474), Expect = 8e-46 Identities = 34/273 (12%), Positives = 78/273 (28%), Gaps = 19/273 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + E +I +D + I + + + Sbjct: 249 GAKYRGEFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILKPALARGEL 308 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I + + FQ + PS+ ++ EI V Sbjct: 309 HTIGATTLKEYRKYFEKDAALQRRFQPVNVGEPSVNEALA--MLRGIKEKLEIHHNVTIN 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D A +LKM+ + + + ++ + Sbjct: 367 DSALVAAAKLSKRYIADRFLPDKAID--LID--EAAAELKMQIESEPSSLRKVRKDIETL 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL----SEAEERRQYLF 443 + E + +++ DE ++ S++ + A+++ L Sbjct: 423 EVENEALKMENDEKNQKRLDEIAKELANLKEKQNALNSQFENEKSVFDGISAKKKEIDLL 482 Query: 444 EELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + + ++ +F +I L K +E+ Sbjct: 483 KNEASLAKARGEFQKAAELEYGKIPSLEKEVEI 515 >gi|29341916|gb|AAO79702.1| endopeptidase Clp ATP-binding chain B [Bacteroides thetaiotaomicron VPI-5482] Length = 862 Score = 187 bits (474), Expect = 8e-46 Identities = 32/276 (11%), Positives = 77/276 (27%), Gaps = 25/276 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 246 GAKYKGEFEERLKSVVNEVKKSEGDIILFIDEIHTLVGAGKGEGAMDAANILKPALARGE 305 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ D P + ++ E V+ Sbjct: 306 LRSIGATTLDEYQKYFEKDKALERRFQIVQVDEPDTLSTI--SILRGLKERYENHHHVRI 363 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + E R A D L D A L+ME +++E+ ++ Sbjct: 364 KDDAIIAAVELSSRYITDRFLPDKAID--LMD--EAAAKLRMEVDSVPEELDEISRKIKQ 419 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQY 441 + E + + + D + + +K+ ++ + + + Sbjct: 420 LEIEREAIKREND---KPKLEIIGKELAELKEVEKSFKAKWQSEKTLMDKIQQNKVEIEN 476 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 L E + E D+ + +++ L K +E T Sbjct: 477 LKFEAEKAEREG-DYGKVAEIRYGKLQALDKEIEDT 511 >gi|15639065|ref|NP_218511.1| ATP-dependent Clp protease subunit B (clpB) [Treponema pallidum subsp. pallidum str. Nichols] Length = 878 Score = 186 bits (473), Expect = 1e-45 Identities = 34/272 (12%), Positives = 76/272 (27%), Gaps = 20/272 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + Sbjct: 248 GAKFRGEFEERLKAVIEAVQKSDGGVILFIDELHTLVGAGASEGSMDASNLLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ P++E+ ++ E+ V+ Sbjct: 308 LRSIGATTLNEYRKYIEKDAALERRFQQVYCVQPTVEDTIA--ILRGLQEKYEVHHGVRI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + R A D L D A + LKME + + +++++E + Sbjct: 366 KDEALVAATVLSDRYITNRFLPDKAID--LVD--EAASRLKMEIESQPVELDQVERKILQ 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL 446 E ++D A +E ++ + E RR E Sbjct: 422 LNIEKASLLKESDPASKERLEKLEKELAGFLERRAAMQVQWQNEKGRIEESRRYKEELER 481 Query: 447 KAQENS----QCDFDPMKMRMESEIRGLLKGM 474 E + + D + +I L K + Sbjct: 482 LRIEETMFSREGDLNKAAELRYGKIPELEKKI 513 >gi|72381856|ref|YP_291211.1| ATPase [Prochlorococcus marinus str. NATL2A] Length = 863 Score = 186 bits (473), Expect = 1e-45 Identities = 35/275 (12%), Positives = 86/275 (31%), Gaps = 24/275 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + ++ + + Sbjct: 249 GAKFRGEFEERLKSVLKNVTDSEGKIILFIDEIHTVVGAGASGGAMDASNLLKPMLARGE 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ+ PS+++ ++ E+ V+ Sbjct: 309 LRCIGATTINEHRENFEKDPALERRFQQILVKQPSVQDTI--SILRGLKERYEVHHGVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A R + A D L D + + LKME K +I+E++ + Sbjct: 367 SDNALIAAAILSDRYIPERFLPDKAID--LID--ESASRLKMEITSKPEEIDEIDRKIIQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL 446 + E + ++D + +E K+ + + E+ E L EE+ Sbjct: 423 LEMEKLSLEGESDTSSKERLELITSELALLTKNQIEVNKKWKREK--ESIEEISTLKEEI 480 Query: 447 K----AQENSQCDFDP--MKMRMESEIRGLLKGME 475 + E ++ ++D + + ++ Sbjct: 481 EKVQLEIEKAKRNYDLNRAAELEYGTLVNYQQNLK 515 >gi|16331154|ref|NP_441882.1| ClpB protein [Synechocystis sp. PCC 6803] Length = 898 Score = 186 bits (472), Expect = 1e-45 Identities = 40/282 (14%), Positives = 85/282 (30%), Gaps = 29/282 (10%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGS--EDARGKKLFWKADELIEK 273 F + + +I +D V + E + ++ + Sbjct: 250 GAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAGNLLKPMLAR 309 Query: 274 LKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + + I ++ + FQ+ PS+++ ++ E+ V Sbjct: 310 GELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTI--SILRGLKEKYEVHHGV 367 Query: 325 QDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV 384 + T + A R + A D L D A LKME K ++E+++ + Sbjct: 368 KITDSALVAAATLSHRYIQDRFLPDKAID--LVD--EAAARLKMEITSKPVELEDIDRRL 423 Query: 385 RLKQAEADMFQLK-------ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEA 435 Q E + + AD++ +E + ++L + L E Sbjct: 424 MQLQMEKLSLEGEEKRPGLGADKSSKERLEKIQQEITELEGQQQELSGQWLSEKQMLEEI 483 Query: 436 EERRQYLFEELKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 ++ E E ++ D E+ L +E Sbjct: 484 NTLKEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIE 525 >gi|54035913|sp|Q9PKS5|CLPB_CHLMU Chaperone clpB Length = 867 Score = 185 bits (471), Expect = 2e-45 Identities = 40/274 (14%), Positives = 80/274 (29%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + A I +D V + + + Sbjct: 247 GAKYRGEFEERLKSVLKGVEASEGACILFIDEVHTLVGAGATDGAMDAANLLKPALARGT 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ PSLE+ F++ EI V+ Sbjct: 307 LHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLED--AVFILRGLREKYEIFHGVRI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + R A D L D A + ++M+ I+E E + Sbjct: 365 TEGALNAAVVLSYRYITDRFLPDKAID--LID--EAASLIRMQIGSLPLPIDEKERELSA 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEE 445 + + + + A +E ++ + + A + ++ E Sbjct: 421 LIVKQEAIKREQAPAYQEEANEMQKAIDRVKEELAALRLRWDEEKGLIAGLKEKKNSLEN 480 Query: 446 LK-AQENSQC--DFDPMKMRMESEIRGLLKGMEM 476 LK A+E ++ D++ + S I L K + + Sbjct: 481 LKFAEEEAERTADYNRVAELRYSLIPSLEKEIRL 514 >gi|57898943|emb|CAI44947.1| putative HSP100 protein [Phycomyces blakesleeanus] Length = 901 Score = 185 bits (470), Expect = 2e-45 Identities = 39/274 (14%), Positives = 83/274 (30%), Gaps = 20/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + E +I +D + + + ++ + + Sbjct: 248 GAKYRGEFEERLKAVLKEVKESEEGIILFIDEIHTVLGAGKGEGSMDAANLLKPMLARGE 307 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ FQ+ D PS+ ++ E V+ T Sbjct: 308 LRCIGATTLTEYKVIEKDPAFERRFQKVDVGEPSVAATI--SILRGLKERYESYHGVKIT 365 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + V A+ R A D L D+A A + +++ K +I+ LE Sbjct: 366 DSALVVAAQLSDRYITTRFLPDKAID--LIDEAGA--NTRVQLDSKPEEIDVLERKHFQL 421 Query: 388 QAEADMFQLKA-DEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 + EA + ++ +E +Y K RL E + +Q L E Sbjct: 422 EIEAMALGKEKNNKDSQERLKVVKEEMAKIQEELKPLKLRYDMDKGRLDEIRDLKQKLDE 481 Query: 445 ELKAQENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + ++ +D I + + + Sbjct: 482 LKRKAVEARNRYDLDSAADIEYYAIPDVEQRINA 515 >gi|48855282|ref|ZP_00309441.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Cytophaga hutchinsonii] Length = 871 Score = 185 bits (469), Expect = 3e-45 Identities = 32/273 (11%), Positives = 81/273 (29%), Gaps = 25/273 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D ++ +D + + + + + Sbjct: 246 GAKYKGEFEERLKSVIKEVIDSDGEIVLFIDEIHTLIGAGGGEGAMDAANLLKPALARGE 305 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ D P+ ++ ++ E+ ++ Sbjct: 306 LHAIGATTLKEYQKYIEKDKALERRFQAVIVDEPNTQD--AISILRGIKEKYEVHHGIRI 363 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + E R A D L D+A A L++E +++E+ + Sbjct: 364 QDDAIIAAVELSQRYISDRYLPDKAID--LMDEASAK--LRIELDSMPQELDEILRRIMQ 419 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQY 441 + E + + + + +E E +K+ + + L +A+E Sbjct: 420 LEIEREAIRRENN---KEKETILSRELAELNEQKSQIMAKWQEEKRVIDGLKQAKEDIDR 476 Query: 442 LFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 E + E + D+ + +I+ K + Sbjct: 477 YKMEAEQAERNG-DYGKVAEIRYGKIQESEKQL 508 >gi|47568371|ref|ZP_00239072.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Bacillus cereus G9241] Length = 866 Score = 185 bits (469), Expect = 3e-45 Identities = 30/274 (10%), Positives = 79/274 (28%), Gaps = 22/274 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + I + ++ + + Sbjct: 251 GAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGE 310 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ ++ P++E+ ++ EI V Sbjct: 311 LHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTI--SILRGLKERFEIYHGVNI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + + R + D L D+ACA ++ E +++E+ + Sbjct: 369 HDRAIVAASVLSDRYISDRFLPDKSID--LVDEACA--TIRTEIDSMPTELDEVTRRIMQ 424 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL 446 + E + D +E +K+ K + + + R Sbjct: 425 LEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEK-EDIHKVRDLREHLE 483 Query: 447 KAQENSQC-----DFDPMKMRMESEIRGLLKGME 475 + + + D + +I + K ++ Sbjct: 484 RLRRELEEAEGNYDLNKAAELRHGKIPAIEKELK 517 >gi|22296180|dbj|BAC10004.1| endopeptidase Clp ATP-binding chain B [Thermosynechococcus elongatus BP-1] Length = 887 Score = 185 bits (469), Expect = 3e-45 Identities = 38/284 (13%), Positives = 81/284 (28%), Gaps = 29/284 (10%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKL 274 F + ++ +D + + ++ + Sbjct: 249 GAKFRGDFEDRLKAVLHEVTHSEGQIVLFIDELHTVVGAGANQNSSMDASNLLKPMLARG 308 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + I ++ + FQ+ PS+E+ ++ EI V+ Sbjct: 309 ELRCIGATTLDEYRKYIEKDAALERRFQQVYIGQPSVEDTI--SILRGLKDRYEIHHNVK 366 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R A D L D A LKME K ++E LE +R Sbjct: 367 ITDSALVAAAMLSDRYISDRYLPDKAID--LVD--EAAAKLKMEITTKPAELEALERRLR 422 Query: 386 LKQAEADMFQLKAD--------EARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEA 435 + E + + +A R+ +++ + L Sbjct: 423 QLEMERLSLKQEESLPLSQAPLQATRDRLQRIEAEIAQLQPRQQAMQARWQAEKELLERI 482 Query: 436 EERRQYLFEELKAQENSQCDFDPMKM--RMESEIRGLLKGMEMT 477 ++ + E ++ D++ K + L + +E T Sbjct: 483 NSLKEEEDQVKLQIEQAERDYNLNKAAQLKYGRLETLQRELEAT 526 >gi|7435720|pir||D71409 probable endopeptidase Clp ATP-binding chain - Arabidopsis thaliana Length = 831 Score = 183 bits (465), Expect = 1e-44 Identities = 36/273 (13%), Positives = 84/273 (30%), Gaps = 21/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T+ F + + + ++ +D + + + ++ + + Sbjct: 214 GTTLRGQFEERLKSVLKAVEEAQGKVVLFIDEIHMALGACKASGSTDAAKLLKPMLARGQ 273 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + FQ+ PS+ + ++ E V+ Sbjct: 274 LRFIGATTLEEYRTHVEKDAAFERRFQQVFVAEPSVPDTI--SILRGLKEKYEGHHGVRI 331 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 R + + A+ R R A D L D++CA +K + + +I+ LE V Sbjct: 332 QDRALVLSAQLSERYITGRRLPDKAID--LVDESCA--HVKAQLDIQPEEIDSLERKVMQ 387 Query: 387 KQAEADMFQLKADE-ARREAEXXXXXXXXXXXXXXXXYT--SKYLKLRLSEAEERRQYLF 443 + E + + D+ A T K K ++E +Q Sbjct: 388 LEIEIHALEKEKDDKASEARLSEVRKELDDLRDKLEPLTIKYKKEKKIINETRRLKQNRD 447 Query: 444 EELKAQENSQCDFD--PMKMRMESEIRGLLKGM 474 + + A + ++ D + I+ + + Sbjct: 448 DLMIALQEAERQHDVPKAAVLKYGAIQEVESAI 480 >gi|49655876|emb|CAG88481.1| unnamed protein product [Debaryomyces hansenii CBS767] Length = 801 Score = 183 bits (464), Expect = 1e-44 Identities = 32/273 (11%), Positives = 83/273 (30%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + Q +I +D + + + + + K Sbjct: 179 GAKYRGDFEGKLKQILKEVEEKQGKVILFIDELHILMGLGKAEGSIDASNLLKPALARGK 238 Query: 276 S---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + F + P++++ ++ E+ V+ Sbjct: 239 LSLCGATTIEEYRKYVEKDAALARRFSAVTVNEPTVQDTI--SILRGLKERYEVHHGVRI 296 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D+AC + L+++ + K I +L+ + Sbjct: 297 TDGALVTSALYSSRYITDRFLPDKAID--LVDEAC--STLRLQHESKPDAIAQLDRQIMT 352 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 Q E + + + D+ + + +T K+ + + + + + L + Sbjct: 353 IQIELESLRKEDDQLSLDRKTKLEEELNVKSAELKDFTEKWESEKKLIDDVKNAKTDLEQ 412 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 E Q + + + I L + ++ Sbjct: 413 AKFDLEQCQREGNYGKASELQYATIPKLEEQLK 445 >gi|23128140|ref|ZP_00109994.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc punctiforme PCC 73102] Length = 879 Score = 182 bits (463), Expect = 2e-44 Identities = 34/277 (12%), Positives = 77/277 (27%), Gaps = 23/277 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKL 274 F + + D ++ +D + + ++ + Sbjct: 250 GAKLRGEFEERLKAVLKEVMDSNGQIVLFIDELHTVVGTGSSQQGAMDAGNLLKPMLARG 309 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + I ++ + FQ+ D PS+EN ++ E+ V+ Sbjct: 310 ELRCIGATTLDEFRKHIEKDAALERRFQQVFVDQPSVENTI--SILRGLKERYEVHHNVK 367 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + + A R A D L D A LKME K ++E ++ + Sbjct: 368 ISDSALVAAATLSARYISDRFLPDKAID--LVD--EAAAQLKMEITSKPAELETIDRRLM 423 Query: 386 LKQAEADMFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQY 441 + E + +E + ++ + L ++ Sbjct: 424 QLEMEKLSLAGEEKGTPQTKERLERIEQEIANLTEKQQIFNEQWQGEKQILEAISALKKE 483 Query: 442 LFEELKAQENSQCDFDPMKM--RMESEIRGLLKGMEM 476 E ++ +D K ++ G+ E Sbjct: 484 EDALRVQIEQAERAYDLNKAAQLKYGKLEGVQHEREA 520 >gi|34540850|ref|NP_905329.1| clpB protein [Porphyromonas gingivalis W83] Length = 863 Score = 182 bits (462), Expect = 2e-44 Identities = 27/273 (9%), Positives = 75/273 (27%), Gaps = 23/273 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 246 GAKYKGEFEERLKAVVNEVTGAEGEIILFIDEIHTLVGAGKSEGAMDAANILKPALARGE 305 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ D P + ++ E V+ Sbjct: 306 LRAIGATTLDEYRKYFEKDKALERRFQMVMVDEP--DELSSISILRGLKEKYENHHKVRI 363 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + R + A D L D A L+ME +++E+ ++ Sbjct: 364 KDDAIIAAVKLSHRYITERFLPDKAID--LMD--EAAARLRMEVDSLPEELDEISRRIKQ 419 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLFE 444 + E + + + DE E +++ + + ++ + + E Sbjct: 420 LEIEREAIKRENDE---EKVQFLDREIAELKEKEASEKAQWQNEKDRINQIQQLKIDIEE 476 Query: 445 ELKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 + ++ + D + I+ ++ Sbjct: 477 LKFQADRAEREGDYGRVAEIRYGLIKQKETEID 509 >gi|15425870|gb|AAK97626.1| heat shock protein 78 [Candida albicans] Length = 812 Score = 181 bits (460), Expect = 3e-44 Identities = 30/277 (10%), Positives = 81/277 (29%), Gaps = 21/277 (7%) Query: 216 NHTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL 274 + F + + +I +D + + + + Sbjct: 174 SGAKYRGDFESKLKSILKEVEEKNGKVILFIDEFHLLMGLGKAEGSIDASNLLKPALARG 233 Query: 275 KS---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 K + ++ + F + P+ E+ ++ E+ V+ Sbjct: 234 KLSMCGATTIEEYRKYVEKDAALARRFSPVTVNEPTGEDTI--SILRGLKERYEVHHGVR 291 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R A D L D A + L+++ + + I L+ + Sbjct: 292 IMDSALVTAALYSNRYITDRFLPDKAID--LVD--EASSTLRLQHESRPDAIATLDRQIM 347 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS-EAEERRQYLFE 444 + E + + + D+ + + T ++ + + +A + + E Sbjct: 348 TIEIELESLRKEEDQLSIDRKHKLEKELEVKKSELKELTDQWESEKRAIDAVKNAKSELE 407 Query: 445 ELK-AQENSQCDFDPMKM--RMESEIRGLLKGM-EMT 477 + K E + + D + + I L + E++ Sbjct: 408 KAKYELEQATREGDYARASRIQYASIPELQDKIQELS 444 >gi|68350763|gb|EAN31526.1| ClpB protein, putative [Theileria parva] Length = 985 Score = 180 bits (458), Expect = 5e-44 Identities = 30/285 (10%), Positives = 73/285 (25%), Gaps = 35/285 (12%) Query: 220 ELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKL 278 F + + + + ++ +D + + E ++ + + + Sbjct: 353 YRGEFEERLKEILSEIENSQGEIVMFIDEIHTLVGAGESQGSLDAGNILKPMLARGELRC 412 Query: 279 ID---------PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTAR 329 I ++ + FQ D P++E ++ E+ V+ Sbjct: 413 IGATTLQEYRQKIEKDKALERRFQPIYIDEPNIEETI--NILRGLKERYEVHHGVRILDS 470 Query: 330 KMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQA 389 + R A D L D A LK++ K Q++ +E + + Sbjct: 471 TLIQAVLLSNRYITDRYLPDKAID--LID--EAAAKLKIQLSSKPLQLDIIERKLLQLEM 526 Query: 390 EADMFQLKADEAR---------------REAEXXXXXXXXXXXXXXXXYTSKYLKLRL-- 432 E D + +LK + Sbjct: 527 EKISILNDNDNIGILSKNEKNDTLKPNDKLRLENIDKLVNELTKQKDELNEMWLKEKSLV 586 Query: 433 SEAEERRQYLFEELKAQENSQCDFDP--MKMRMESEIRGLLKGME 475 ++ + + ++ DFD + L ++ Sbjct: 587 DNIRNIKERIDIVKIEIDKAERDFDLNHAAELRFETLPDLENQLK 631 >gi|29570852|gb|AAO73810.2| heat shock protein CLPA [Paracoccidioides brasiliensis] Length = 926 Score = 180 bits (457), Expect = 6e-44 Identities = 35/274 (12%), Positives = 76/274 (27%), Gaps = 21/274 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 + F + + + E ++ +D + + G ++ + Sbjct: 269 GSKYRGEFEERMKGVLKEIEESKETIVLFVDEIHLLMGAGSSGEGGMDAANLLKPMLARG 328 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + I ++ FQ+ P++ ++ E+ V Sbjct: 329 QLHCIGATTLGEYRKYIEKDQAFERRFQQVLVKEPTVGETI--SILRGLKERYEVHHGVN 386 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R R A D L D A +++ R+ + ++ LE R Sbjct: 387 ILDGAIVSAANLASRYLTARRLPDSAVD--LID--EAAAAVRVTRESQPEALDTLERRAR 442 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLF 443 Q E + D A + KY K R + ++ + L Sbjct: 443 QLQIEIHALAREKDAASKARLEAAKQEAANVNEELRPLREKYESEKQRSKDIQDAKIKLD 502 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 ++ + D + I + K +E Sbjct: 503 LLKVKRDEATRSGDTQTASDLIYYAIPDVEKRIE 536 Score = 39.1 bits (90), Expect = 0.24 Identities = 19/147 (12%), Positives = 44/147 (29%), Gaps = 6/147 (4%) Query: 255 SEDARGKKLFWKADELIEKLKSKLIDPLDACNFILMFFQECDSD-SPSLENGEGGFLIAP 313 + DE ++ +A + + ++ + + Sbjct: 404 TARRLPDSAVDLIDEAAAAVRVTRESQPEALDTLERRARQLQIEIHALAREKDAASKARL 463 Query: 314 QDACNEIA---EVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMER 370 + A E A E ++ K E + + + A+ LD + D+A D + Sbjct: 464 EAAKQEAANVNEELRPLREKYESEKQRS-KDIQDAKIKLDLLKVK-RDEATRSGDTQTAS 521 Query: 371 QKKKPQIEELESIVRLKQAEADMFQLK 397 I ++E + +AE + Sbjct: 522 DLIYYAIPDVEKRIEQLEAERARQDAE 548 >gi|57505126|ref|ZP_00371071.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter coli RM2228] Length = 857 Score = 180 bits (456), Expect = 1e-43 Identities = 34/271 (12%), Positives = 72/271 (26%), Gaps = 21/271 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + E +I +D + I + + + Sbjct: 249 GAKYRGEFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILKPALARGEL 308 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I + + FQ + PS+ ++ EI V Sbjct: 309 HTIGATTLKEYRKYFEKDAALQRRFQPVNVGEPSVNEALA--MLRGIKEKLEIHHNVTIN 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D A +LKM+ + + + + + Sbjct: 367 DSALVAAAKLSKRYIADRFLPDKAID--LID--EAAAELKMQIESEPSSLRKARKDIETL 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYL 442 + E + +++ DE ++ S++ + +S ++ L Sbjct: 423 EVENEALKMENDEKNQKRLDEIAKELANLKEKQSALNSQFENEKAVFDSISAKKKEIDSL 482 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 E +N +F +I K Sbjct: 483 KNEAVFAKNKG-EFQKAAELEYGKIPECEKE 512 >gi|57505852|ref|ZP_00371777.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Campylobacter upsaliensis RM3195] Length = 857 Score = 180 bits (456), Expect = 1e-43 Identities = 35/271 (12%), Positives = 75/271 (27%), Gaps = 21/271 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + +I +D + I + + + Sbjct: 249 GAKYRGEFEDRLKSVVDEVIKSKNVILFIDEIHTIVGAGASEGSMDAANILKPALARGEL 308 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I + + FQ + PS+ ++ EI V T Sbjct: 309 HTIGATTLKEYRKYFEKDAALQRRFQPVSVNEPSINEALA--MLRGIKEKLEIHHNVSIT 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D A +LKM+ + + + ++ + Sbjct: 367 DSALVAAAKLSKRYINDRFLPDKAID--LID--EAAAELKMQIESEPSSLRKVRKELETL 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYL 442 + E + +++ +EA + +++ + +S ++ L Sbjct: 423 EVEKEALKMEQNEANEKRLEEIAKELANLKEEQNALNAQFENEKSVFDSISVKKKEIDTL 482 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 E +N DF +I L K Sbjct: 483 KNEANLAKNKG-DFQKAAELEYGQIPSLEKE 512 >gi|32261656|gb|AAP76706.1| ATP-dependent CLP protease ClpA [Helicobacter hepaticus ATCC 51449] Length = 859 Score = 178 bits (453), Expect = 2e-43 Identities = 30/271 (11%), Positives = 72/271 (26%), Gaps = 21/271 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + +I +D + I + + + Sbjct: 248 GAKYRGEFEERLKNVVDEVKKAGNIILFIDEIHTIVGAGASEGSMDAANILKPALARGEL 307 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I + + FQ + + PS+ E ++ E V T Sbjct: 308 HTIGATTLKEYRKYFEKDAALTRRFQPINVNEPSIN--EALQILRGIKPNLEAHHNVNIT 365 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D A +LKM+ + + ++ +++ + Sbjct: 366 DAALVAAAKLSSRYITDRFLPDKAID--LID--EAAAELKMQIESEPLELSKIKKHIANL 421 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYL 442 + E ++ K+ + + ++ + L Sbjct: 422 EVEKQALNMEKTNVNEARVLEIDKELENLREEKMSLEGKFEQEKSVFTRIATIKAELDSL 481 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 E + + S D++ +I + Sbjct: 482 KRESELAKRSG-DYNKAAEIDYGKIPDIQAQ 511 >gi|57241181|ref|ZP_00369128.1| clpB protein VC0711 [Campylobacter lari RM2100] Length = 857 Score = 178 bits (451), Expect = 4e-43 Identities = 34/271 (12%), Positives = 74/271 (27%), Gaps = 21/271 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + +I +D + I + + + + Sbjct: 249 GAKYRGEFEDRLKAVVNEVIKHKNIILFIDEIHTIVGAGANEGSMDAANILKPALARGEL 308 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I + + FQ + PS+ ++ EI V Sbjct: 309 HTIGATTLKEYRKYFEKDAALQRRFQPVNVAEPSVNEALA--MLRGIKEKLEIHHNVTIN 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D A +LKM+ + + + ++ + Sbjct: 367 DSALVAAAKLSKRYIANRFLPDKAID--LID--EAAAELKMQIESEPNSLRKVRKQIESL 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYL 442 + E + +++ +EA + +K+ + +S ++ L Sbjct: 423 EVENEALKMEENEANEKRLEEIKKELANLKEEQIKLNAKFENEKAVFNGISAKKKEIDTL 482 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 E +N DF +I K Sbjct: 483 KNEAILAKNKG-DFQKAAEIEYGKILECEKE 512 >gi|68175940|ref|ZP_00549169.1| AAA ATPase, central region:Clp, N terminal [Frankia sp. CcI3] Length = 880 Score = 177 bits (450), Expect = 4e-43 Identities = 33/276 (11%), Positives = 77/276 (27%), Gaps = 20/276 (7%) Query: 213 IACNHTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELI 271 T+ F + + A ++ +D + + L+ Sbjct: 253 ALAAGTAHRGAFEERLKAVMAQVTASEGRILLFVDELHAVLGAGAAEGKTDAGNVLKPLL 312 Query: 272 EKLKSKLID---------PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAE 322 + LI +++ FQ + PS+ + ++ EI Sbjct: 313 IRGDLHLIGTTTLEEYRRQIESDPAFARRFQTVIINEPSVADTI--SILRGLRGRLEIFH 370 Query: 323 VVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELES 382 V+ + A R A D L D+A A L+ + ++E+ Sbjct: 371 GVRIADAALVSAAVLSHRYISDRFLPDKAID--LVDEAGA--MLRTDIDSMPTGLDEITR 426 Query: 383 IVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQ 440 V + E ++D A +++ R + R+ Sbjct: 427 RVVRLEIEEAALAQESDPASIARLDQLRGELADVRAAANTMRARWEAERQAIRRVRGLRE 486 Query: 441 YLFEELKAQENSQCDFDP--MKMRMESEIRGLLKGM 474 + + + E+++ D + + L + + Sbjct: 487 EIEQARRRAEDAERAHDLGTAAELRHTRLPELDRRL 522 >gi|32446255|emb|CAD76084.1| ClpB protein [Rhodopirellula baltica SH 1] Length = 899 Score = 177 bits (449), Expect = 7e-43 Identities = 31/276 (11%), Positives = 74/276 (26%), Gaps = 24/276 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + + + Sbjct: 267 GAKFRGDFEERLKSVLREVKDSDGKVILFIDELHLVVGAGNAEGSADAANLLKPELARGA 326 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ P++E+ ++ E V+ Sbjct: 327 LRCIGATTLDEYRQHIEKDAALERRFQPVFVGEPNVEDTVA--ILRGLKPRYESHHGVRI 384 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A R A D L D A + L ME++ I+ L+ +R Sbjct: 385 TDSALVAAANLSDRYIADRFLPDKAID--LID--EAASRLAMEKESVPEPIDRLQRRLRQ 440 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--------SEAEER 438 + + + + + ++ ++ + ++ Sbjct: 441 LELVHRQLVDEQEASAVDKRVEVEEEMESAKAELASLKEQWETEKMGLDDVQSVRQEVDQ 500 Query: 439 RQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 Q+ F +L A + SE+ + + Sbjct: 501 LQHRFAQLDADAKEKQLRGESPEDAYSEMLQVQSRL 536 >gi|28493713|ref|NP_787874.1| ATP-dependent protase ATP-binding subunit [Tropheryma whipplei str. Twist] Length = 705 Score = 177 bits (448), Expect = 7e-43 Identities = 35/271 (12%), Positives = 79/271 (29%), Gaps = 20/271 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 S F K V + +I +D V + L+ + + Sbjct: 101 GASYRGEFEKRVKNLLEEIQKSKVII-FIDEVHTLMSAGAAEGAIAAGNMLKPLLARGEL 159 Query: 277 KLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 +LI + + FQ+ P+LE+ ++ E V + Sbjct: 160 RLIGATTLDEYREHLEKDPALERRFQQVFVGEPNLEDCIA--IMRGLKERYEAHHKVSIS 217 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + E R + A D A + L+ME ++++L V Sbjct: 218 DTALVTAVELSSRYITGRQLPDKAID----LLDEAASSLRMEIDSSPVELDQLRREVDRL 273 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFEE 445 + E + + D + + + + RL++ ++ + Sbjct: 274 RLEELALKSENDPTSEQRLRSITNQLSGKQEMLNTLQASWNSERARLNQIGALKEQIDIA 333 Query: 446 LKAQENSQCDFDP--MKMRMESEIRGLLKGM 474 ++ + +Q + + + I L K + Sbjct: 334 KQSADIAQREGRLEDASRLLYATIPQLQKNL 364 >gi|34482740|emb|CAE09740.1| CLP PROTEASE ATP-BINDING SUBUNIT [Wolinella succinogenes] Length = 857 Score = 177 bits (448), Expect = 9e-43 Identities = 28/271 (10%), Positives = 72/271 (26%), Gaps = 20/271 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + +I +D + I + + + Sbjct: 248 GAKYRGEFEDRLKKVVEEVKKAGNVILFIDEIHTIVGAGASEGSMDAANILKPALARGEL 307 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I + + FQ + P++ E ++ E V Sbjct: 308 HTIGATTLKEYRKYFEKDAALQRRFQPIFLNEPTIN--EALQILRGIKERLEAHHNVTIY 365 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D A +LKM+ + + ++ ++ ++ Sbjct: 366 DSALVAAAKLSSRYITDRYLPDKAID--LID--EAAAELKMQIESEPTELSLIKRQIQRL 421 Query: 388 QAEADMFQLKADEA-RREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFE 444 + E + ++ + +++ + +E + E Sbjct: 422 EVEKEALLMEKESTHSEARIKEIQAELENAKERQRTLLAQFENEKAVFNEIASIKAKADE 481 Query: 445 ELKAQENSQC--DFDPMKMRMESEIRGLLKG 473 + E ++ D++ +I L Sbjct: 482 LRRESELAKRSGDYNKAAEIDYGKIPELENR 512 >gi|23494372|dbj|BAC19339.1| putative endopeptidase Clp ATP-binding chain C [Corynebacterium efficiens YS-314] Length = 927 Score = 176 bits (447), Expect = 1e-42 Identities = 31/267 (11%), Positives = 73/267 (27%), Gaps = 46/267 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + + + + Sbjct: 276 GSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGEL 335 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+E ++ E V T Sbjct: 336 QTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVE--LSIEILKGLRDRYEAHHRVSIT 393 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D+A A ++++R + E++ + Sbjct: 394 DGALVAAAQLSDRYINDRFLPDKAVD--LIDEAGA--RMRIKRMTAPESLREVDERIAD- 448 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + + A + + + ++ + L EE Sbjct: 449 ------VRREKEAAIDAQDF----------------------EKAAGLRDKERKLGEERA 480 Query: 448 AQENSQCDFDPMK--MRMESEIRGLLK 472 +E D + E +I +L Sbjct: 481 EKEKQWRSGDLEEIAEVGEEQIAEVLA 507 >gi|57222826|gb|AAW40870.1| heat shock protein, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 898 Score = 176 bits (446), Expect = 1e-42 Identities = 38/281 (13%), Positives = 87/281 (30%), Gaps = 30/281 (10%) Query: 217 HTSELFGFVKDVFQHCAPNWDFE----ALIKELDFVRKIFRGSEDARGKKLFWKADELIE 272 + + V + +I +D + I G + + G ++ Sbjct: 256 GAKYKGEYEERVKAVLSEVEKSGDEGTQIILFIDEIHLIMAGKDSSGGMDAANLLKPMLA 315 Query: 273 KLKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV 323 + K K+I ++ + F + D PS+ + ++ E Sbjct: 316 RGKLKVIGATTLNEYREYIEKDSAFERRFAQVIVDEPSVPDTVA--IMRGIREKYETHHG 373 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESI 383 V+ + + A+ + R A D A + +K+ R+ + I+ELE Sbjct: 374 VRIMDSALVLAAQLAKQYLTARRLPDSAID----LLDEAASAVKVARETRPEAIDELERK 429 Query: 384 VRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQY 441 + E + + DEA +E +Y + + E R+ Sbjct: 430 KLGLEVEIHALEREKDEASKERLEVAKKAIADLEDKLGPLKREYENDKHLGDQIHELRRK 489 Query: 442 LFEELKAQENSQCDFDPMKM---------RMESEIRGLLKG 473 + E + ++ +D + E +++ L + Sbjct: 490 IDELRTKADEAERRYDLATAADIRYHSIPQREQKLQELEQK 530 >gi|399212|sp|P31541|CLAA_LYCES ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4A, chloroplast precursor Length = 926 Score = 175 bits (445), Expect = 2e-42 Identities = 35/269 (13%), Positives = 82/269 (30%), Gaps = 43/269 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + +I +D V + + + + Sbjct: 344 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGEL 403 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS++ ++ EI + T Sbjct: 404 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETI--QILKGLRERYEIHHKLHYT 461 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E A+ + A D L D A + +++ + + ELE +R Sbjct: 462 DEAIEAAAKLSHQYISDRFLPDKAID--LID--EAGSRVRLRHAQLPEEARELEKELRQI 517 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEE 445 + +EA R + K +LR E + + L ++ Sbjct: 518 -------TKEKNEAVRGQDF-----------------EKAGELRDREMDLKAQISALIDK 553 Query: 446 LKAQENSQCDFDPMK--MRMESEIRGLLK 472 K + ++ + + E++I+ ++ Sbjct: 554 NKEKSKAESEAGDAAGPIVTEADIQHIVS 582 >gi|7189542|gb|AAF38444.1| ATP-dependent Clp protease, subunit B [Chlamydophila pneumoniae AR39] Length = 872 Score = 175 bits (445), Expect = 2e-42 Identities = 34/273 (12%), Positives = 78/273 (28%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + I +D V + + + Sbjct: 253 GAKYRGEFEERLKSVLKDVESGDGEHIIFIDEVHTLVGAGATDGAMDAANLLKPALARGT 312 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ PSLE+ F++ EI V+ Sbjct: 313 LHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLED--AVFILRGLREKYEIFHGVRI 370 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + R A D L D A + ++M+ I+E E + Sbjct: 371 TEGALNAAVLLSYRYIPDRFLPDKAID--LID--EAASLIRMQIGSLPLPIDEKERELAA 426 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEE 445 + + + + + +E + + + + + ++ E Sbjct: 427 LIVKQEAIKREQSPSYQEEADAMQKSIDALREELASLRLGWDEEKKLISGLKEKKNSLES 486 Query: 446 LK-AQENSQC--DFDPMKMRMESEIRGLLKGME 475 +K ++E ++ D++ + S I L + ++ Sbjct: 487 MKFSEEEAERVADYNRVAELRYSLIPQLEEEIK 519 >gi|29840383|ref|NP_829489.1| ATP-dependent Clp protease, subunit B [Chlamydophila caviae GPIC] Length = 864 Score = 175 bits (444), Expect = 2e-42 Identities = 34/268 (12%), Positives = 75/268 (27%), Gaps = 20/268 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + I +D V + + + Sbjct: 247 GAKYRGEFEERLKSVLKDVESVDGESILFIDEVHTLVGAGATDGAMDAANLLKPALARGT 306 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ PSLE+ F++ EI V+ Sbjct: 307 LHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLED--AVFILRGLREKYEIFHGVRI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + R A D L D A + ++M+ I+E E + Sbjct: 365 TEGALNAAVLLSYRYIPDRFLPDKAID--LID--EAASLIRMQIGSLPLPIDEKERELAA 420 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEE 445 + + + + + +E ++ + + + ++ E Sbjct: 421 LIVKQEAIKREKAPSYQEEAAAMQQSIEQLKEELAALRLRWDEEKKLITGLKEKKNSLEN 480 Query: 446 LK-AQENSQC--DFDPMKMRMESEIRGL 470 +K ++E ++ D++ + S I L Sbjct: 481 MKFSEEEAERVADYNRVAELRYSLIPAL 508 >gi|50555844|ref|XP_505330.1| hypothetical protein [Yarrowia lipolytica] Length = 782 Score = 175 bits (443), Expect = 3e-42 Identities = 34/274 (12%), Positives = 83/274 (30%), Gaps = 20/274 (7%) Query: 216 NHTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKL 274 + F + + +I +D + + + + + Sbjct: 168 SGAKYRGEFEERLKGILEEIDKAEGEVILFVDELHLLLGLGKGEGSVDASNLLKPALSRG 227 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 K + ++ + FQ + PS+E+ ++ E+ V+ Sbjct: 228 KLQCCGATTIDEYRKYIEKDAALARRFQSVMVNEPSVED--AISILRGLKERYEVHHGVR 285 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R A D L D+AC+ L+++ + K +++ELE Sbjct: 286 LTDAALVTAAVYSNRYISDRFLPDKAID--LVDEACSA--LRLQHESKPDELQELERQTV 341 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLF 443 + E + + + D E T + + + + +E ++ L Sbjct: 342 TLEIELESLREEEDPLSVERRKKVEEKLEFKKGEIERLTKVWEDEKRAIDQIKETQKTLD 401 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 + ++ D +I L + ++ Sbjct: 402 GARTDLDTARRTGDFAAASKIQYQDIPELERILK 435 >gi|56750897|ref|YP_171598.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Synechococcus elongatus PCC 6301] Length = 895 Score = 174 bits (442), Expect = 4e-42 Identities = 36/279 (12%), Positives = 81/279 (29%), Gaps = 26/279 (9%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARG--KKLFWKADELIEK 273 F + + ++ +D + + +G ++ + Sbjct: 252 GAKYRGEFEERLRAVLHEVTHSDGQMVLFIDELHTVVGAGAGQQGSAMDAGNLLKPMLAR 311 Query: 274 LKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + + I ++ + FQ+ PS+E+ ++ E V Sbjct: 312 GELRCIGATTTDEYRRTIEKDPALERRFQQVYVSQPSVEDTIA--ILRGLKERYEGHHGV 369 Query: 325 QDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV 384 + T + A+ R A D L D+A A LKME K ++E+LE + Sbjct: 370 KITDGALMAAAKLSHRYISDRFLPDKAID--LIDEASA--QLKMEITSKPSELEDLERRL 425 Query: 385 RLKQAEADMFQLKADEARRE--AEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-----E 437 + E + +A ++ + + E E Sbjct: 426 LQLEMEQLSLSGENGQASVHSDRLQQIQTELQTLQEQQARLNQQWQQEKQLLEELGRLQE 485 Query: 438 RRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + L +++ E D + ++ L + + Sbjct: 486 EEETLRQQVNQAEREH-DLNKGAELKFGQLEALQQQRQA 523 >gi|68479564|ref|XP_716146.1| hypothetical protein CaO19_13747 [Candida albicans SC5314] Length = 899 Score = 173 bits (440), Expect = 6e-42 Identities = 35/275 (12%), Positives = 80/275 (29%), Gaps = 26/275 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + ++ + Sbjct: 252 GAKYKGEFEERLKGVLNEIEKSKEFIILFIDEIHMLMGDGKS----DAANLLKPMLARGA 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + FQ+ D + +++ ++ EI V+ Sbjct: 308 LHCIGATTFAEYRKFISKDGAFERRFQKIDVPAATVQETVA--ILRGIQPKYEIHHGVRI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R A D L D++ A + + R K +++ LE + L Sbjct: 366 LDSALVTAAQLASRYLTYRALPDSAVD--LVDESAAA--VAVARDSKPEELDTLERQLHL 421 Query: 387 KQAEADMFQLKADE--ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYL 442 E + + D A +E +Y + R S + ++ L Sbjct: 422 VDVEINALERDKDADSASKERLNLAKKKKAELEEKIGPLNERYRQERASHEQLTAAKRKL 481 Query: 443 FEELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E ++++ +D I + K +E Sbjct: 482 DELEIKAQDAERRYDTATAADLRYFAIPDIQKQIE 516 >gi|66850531|gb|EAL90858.1| ATP-dependent Clp protease, putative [Aspergillus fumigatus Af293] Length = 997 Score = 173 bits (439), Expect = 9e-42 Identities = 36/279 (12%), Positives = 80/279 (28%), Gaps = 26/279 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 + F + + + + ++ +D + + G ++ + Sbjct: 339 GSKYRGEFEERMKGVLKEIEESKDTIVLFVDEIHLLMGAGSSGEGGMDAANLLKPMLARG 398 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + I ++ FQ+ P++ ++ E+ V Sbjct: 399 QLHCIGATTLGEYRKYIEKDQAFERRFQQVLVKEPTVSETI--SILRGLKEKYEVHHGVN 456 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + AE R R A D L D A +++ R+ + ++ LE +R Sbjct: 457 ILDGAIVAAAELAARYLTARRLPDSAVD--LID--EAAAAVRVTRESEPEALDNLERRLR 512 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQ 440 Q E + + D+A + KY + + +A+ + Sbjct: 513 QLQIEIHALEREKDDASKARLEAAKQEAANVTEELRPLREKYESEKQRSKAIQDAKIKLD 572 Query: 441 YLFEELKAQENSQCDFDPMKMRMESEIRG---LLKGMEM 476 L + E S D I L++ +E Sbjct: 573 SLKVKRDEAERSG-DTQTAADLEYYAIPETKALIERLEA 610 >gi|46400003|emb|CAF23452.1| probable endopeptidase Clp ATP-binding chain [Parachlamydia sp. UWE25] Length = 868 Score = 173 bits (439), Expect = 1e-41 Identities = 32/273 (11%), Positives = 79/273 (28%), Gaps = 20/273 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + +I +D V + + + Sbjct: 248 GTKYRGEFEERLKGILQDIEKSEGQIILFIDEVHTLIGAGATDGAMDAANLLKPALARGI 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ + P++E+ ++ EI V Sbjct: 308 LHCIGATTLNEYQKYIEKDAALERRFQLVLVNEPTIEDSIA--ILRGLRERYEIYHGVHI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + R R A D L D + + ++M+ + I+ E + Sbjct: 366 TESAIHAAVLLSSRYITDRRLPDKAID--LID--ESASLIRMQLGSRPLPIDNKERELAG 421 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFE 444 E + + ++ + ++ + + + +E++ L + Sbjct: 422 LIVEQEAMKRESTPLAKNEVEKLEGRIAQIKEELKILREQWDQEKKIIESLKEKKDKLEK 481 Query: 445 ELKAQENSQC--DFDPMKMRMESEIRGLLKGME 475 +E ++ D++ + + I L K +E Sbjct: 482 LRFEEEAAERKADYNRVAELRYNLIPQLQKEIE 514 >gi|71401304|ref|XP_803323.1| ATP-dependent Clp protease subunit, heat shock protein 100 (HSP100), putative [Trypanosoma cruzi] Length = 603 Score = 173 bits (438), Expect = 1e-41 Identities = 37/273 (13%), Positives = 83/273 (30%), Gaps = 21/273 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + ++ + + Sbjct: 247 GAKYRGEFEERLKSVLNEVRESPTPIILFIDEMHVVLGAGKSEGAMDAANLLKPMLARGE 306 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + F PS++ ++ E VQ Sbjct: 307 LRTIGATTLEEYRKYVEKDAAFERRFMPVYVTEPSVDECI--SILRGLKERYETHHGVQI 364 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + V + R A D L D+ACA +++++ + +I++LE R Sbjct: 365 TDNAVVVAVQLADRYITGRFMPDKAID--LIDEACA--NVRVQLSSRPEEIDQLERKKRQ 420 Query: 387 KQAEADMFQLKADE-ARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLF 443 + EA + E + +E ++Y + R+ E E + L Sbjct: 421 LEIEAKALERDKKEKSSQERLRIVKGDIQRVEELLQPLLARYNEERQRVDELHEMQTRLD 480 Query: 444 EELKAQENSQ--CDFDPMKMRMESEIRGLLKGM 474 E+ E ++ D + + I + + Sbjct: 481 EKKTKLERAERMRDMELAADLKYNAIPVIQDRI 513 >gi|7576225|emb|CAB87915.1| AtClpC [Arabidopsis thaliana] Length = 952 Score = 172 bits (437), Expect = 1e-41 Identities = 33/266 (12%), Positives = 78/266 (29%), Gaps = 38/266 (14%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + +I +D V + + + + Sbjct: 365 GTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGEL 424 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P++E E ++ EI ++ T Sbjct: 425 QCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVE--EAIQILQGLRERYEIHHKLRYT 482 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ + A D L D A + +++ + + ELE +R Sbjct: 483 DEALVAAAQLSHQYISDRFLPDKAID--LID--EAGSRVRLRHAQLPEEARELEKQLRQI 538 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + +EA R + + + R E + + K Sbjct: 539 -------TKEKNEAVRSQD---------------FEMAGSHRDREIELKAEIANVLSRGK 576 Query: 448 AQENSQCDFDP-MKMRMESEIRGLLK 472 ++ + + ES+I+ ++ Sbjct: 577 EVAKAENEAEEGGPTVTESDIQHIVA 602 >gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana] Length = 929 Score = 172 bits (435), Expect = 2e-41 Identities = 36/268 (13%), Positives = 81/268 (30%), Gaps = 42/268 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + +I +D V + + + + Sbjct: 344 GTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGEL 403 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+++ ++ EI ++ T Sbjct: 404 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETI--QILKGLRERYEIHHKLRYT 461 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ + A D L D A + +++ + + ELE +R Sbjct: 462 DESLVAAAQLSYQYISDRFLPDKAID--LID--EAGSRVRLRHAQVPEEARELEKELRQI 517 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ--YLFEE 445 + +EA R + K LR E E R + + + Sbjct: 518 -------TKEKNEAVRGQDF-----------------EKAGTLRDREIELRAEVSAIQAK 553 Query: 446 LKAQENSQCD-FDPMKMRMESEIRGLLK 472 K ++ + + M ES+I+ ++ Sbjct: 554 GKEMSKAESETGEEGPMVTESDIQHIVS 581 >gi|50365236|ref|YP_053661.1| ATPase subunit of ATP-dependant protease [Mesoplasma florum L1] Length = 711 Score = 171 bits (434), Expect = 4e-41 Identities = 33/272 (12%), Positives = 77/272 (28%), Gaps = 24/272 (8%) Query: 220 ELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARG--KKLFWKADELIEKLKS 276 L + V +I +D + I + G + + + + Sbjct: 103 YLGDYESRVKAIVNEIKKSEGEIILFIDELHLIVGAGKTGNGGGMDVSNLLKPALARGEL 162 Query: 277 ---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + + ++ + + FQ + P+++ ++ E V+ Sbjct: 163 KAIGATTLKEYREYIEKDSALERRFQRVMVEEPTVDQTI--SILRGLKERFETYHGVRIH 220 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + +K E +++++ V Sbjct: 221 DNAIVSAANLSNRYIADRFLPDKAID--LID--EASSTIKTELASVPTELDQVNRKVMQL 276 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER-----RQYL 442 + E + D+ +E S++ K + + + L Sbjct: 277 EIEKSALSKEKDDKSKERLAEAVKELEKTKIEQDKLASEWNKQKSQLEKINSFKTTIENL 336 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 EL+ +N + S + L K + Sbjct: 337 KNELEISQNEGN-YKRAGEIQYSLLPSLEKQL 367 >gi|39977113|ref|XP_369944.1| hypothetical protein MG06459.4 [Magnaporthe grisea 70-15] Length = 926 Score = 171 bits (434), Expect = 4e-41 Identities = 37/277 (13%), Positives = 77/277 (27%), Gaps = 24/277 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALI-KELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 + F + + + + +I +D + + G ++ + Sbjct: 266 GSKYRGEFEERMKGVLKEIEEAKEMIVLFVDEIHLLMGAGSSGEGGMDAANLLKPMLARG 325 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + I ++ FQ+ P++ ++ E+ V Sbjct: 326 QLHCIGATTLAEYRKYIEKDAAFERRFQQVLVKEPTINETI--SILRGLKEKYEVHHGVT 383 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R R A D L D A +++ R+ + I+ LE +R Sbjct: 384 IADSALVASANLAARYLTTRRMPDSAVD--LID--EAAAAVRVARESQPEIIDSLERKLR 439 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLF 443 + E + DEA + KY R + +E + L Sbjct: 440 QLKIEIHALSREKDEASKGRLALAKQEAQNVEEELRPLREKYESERKRGKDIQEAKMKLD 499 Query: 444 EELKAQENSQCDFDPMKM--RMESEIRGLL---KGME 475 + E++ D + I K +E Sbjct: 500 QLKVKMEDASRMGDHARAADLQYYAIPEQENVIKQLE 536 >gi|67517159|ref|XP_658462.1| hypothetical protein AN0858.2 [Aspergillus nidulans FGSC A4] Length = 927 Score = 171 bits (434), Expect = 4e-41 Identities = 37/276 (13%), Positives = 76/276 (27%), Gaps = 22/276 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 + F + + + E ++ +D + + G ++ + Sbjct: 266 GSKYRGEFEERLKGVLKEIEESKETIVLFVDEIHLLMGAGASGEGGMDAANLLKPMLARG 325 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV-V 324 + I ++ FQ+ P++ ++ E+ V Sbjct: 326 QLHCIGATTLGEYRKYIEKDAAFERRFQQVLVKEPTVSETI--SILRGLKEKYEVHHGSV 383 Query: 325 QDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV 384 + + A R R A D L D+A A + E + ++ LE Sbjct: 384 RILDAAIVTAATLAARYLTARRLPDSAVD--LIDEAAAAVRVARE--SEPEALDNLERKH 439 Query: 385 RLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYL 442 R Q E + + DEA + KY + ++ + L Sbjct: 440 RQLQIEIHALKREKDEASKARLQAAEQEAANVIEELRPMRQKYESEKQRNKAIQDAKTKL 499 Query: 443 FEELKAQENSQCDFD--PMKMRMESEIRGLLKGMEM 476 QE ++ D I + +EM Sbjct: 500 DNLKNKQEEAERSGDTETAADLKYYAIPETQQHIEM 535 >gi|50923949|ref|XP_472335.1| OSJNBa0039C07.4 [Oryza sativa (japonica cultivar-group)] Length = 888 Score = 171 bits (433), Expect = 4e-41 Identities = 32/268 (11%), Positives = 83/268 (30%), Gaps = 42/268 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + +I +D V + + + + Sbjct: 308 GTKYRGEFEERLKKLMEEIKQNDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGEL 367 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+++ ++ E+ ++ T Sbjct: 368 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETI--QILRGLRERYELHHKLRYT 425 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ + A D L D A + +++ + + +EL+ +R Sbjct: 426 DDSLIAAAQLSYQYISDRFLPDKAID--LID--EAGSRVRLRHAQLPDEAKELDKELRQ- 480 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQ--YLFEE 445 +EA R + K +LR E E + Q + ++ Sbjct: 481 ------VTKDKNEAVRGQDF-----------------EKAGELRDREMELKAQITAIIDK 517 Query: 446 LKAQENSQCD-FDPMKMRMESEIRGLLK 472 K ++ + + + E++I+ ++ Sbjct: 518 SKEMVKAETESGEVGPLVTEADIQHIVS 545 >gi|67919330|ref|ZP_00512911.1| AAA ATPase, central region:Clp, N terminal [Chlorobium limicola DSM 245] Length = 441 Score = 170 bits (432), Expect = 6e-41 Identities = 26/193 (13%), Positives = 57/193 (29%), Gaps = 16/193 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + Sbjct: 251 GAKFRGEFEERLKAVVKEVQSADGEIILFIDEIHLLVGAGSAEGSMDAANILKPALARGE 310 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ D PS+E+ ++ EI V+ Sbjct: 311 LRCIGATTLDEYRKHIEKDAALERRFQTVLVDQPSVEDT--VSILRGLKEKYEIHHGVRI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + AE R A D L D A + L++E +++ L +R Sbjct: 369 KDAALVAAAELSNRYISDRFLPDKAID--LID--EASSRLRLEIDSSPEELDRLNREIRR 424 Query: 387 KQAEADMFQLKAD 399 + E + + + + Sbjct: 425 LEIEREALKRELE 437 >gi|23480353|gb|EAA16934.1| ClpB protein [Plasmodium yoelii yoelii] Length = 1048 Score = 170 bits (432), Expect = 6e-41 Identities = 31/307 (10%), Positives = 75/307 (24%), Gaps = 54/307 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKL 274 F + + D ++ +D + + L+ + Sbjct: 399 GAKYRGDFEERLKSILKEIQDSEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPLLARG 458 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + I ++ + FQ+ D PS++ ++ E+ V+ Sbjct: 459 ELRCIGATTVSEYRQFIEKDKALERRFQQILVDQPSVDETI--SILRGLKERYEVHHGVR 516 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R A D L D A ++LK++ K Q++ +E + Sbjct: 517 ILDSALVQAAILSDRYISYRFLPDKAID--LID--EAASNLKIQLSSKPIQLDNIEKQLI 572 Query: 386 LKQAEADM---------------------------------FQLKADEARREAEXXXXXX 412 + E + + E Sbjct: 573 QLEMEKISILGDKQTASLINKSSSGNDDNNVSTDYTQSQNFIKKRISEKEINRLKTIDHI 632 Query: 413 XXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFEELKAQENSQCDFDP--MKMRMESEIR 468 + ++ ++ + E ++ FD + Sbjct: 633 MNELRKEQKNILESWTSEKMYVDNIRAIKERIDVVKIEIEKAERYFDLNRAAELRFETLP 692 Query: 469 GLLKGME 475 L K ++ Sbjct: 693 DLEKQLK 699 >gi|68262963|emb|CAI36451.1| ATP-dependent Clp protease [Corynebacterium jeikeium K411] Length = 885 Score = 170 bits (432), Expect = 6e-41 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 46/265 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + + + + Sbjct: 269 GSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASILKPKLARGEL 328 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+E ++ E V T Sbjct: 329 QTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVELT--VEILKGLRDRYEAHHRVSIT 386 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ A+ R A D L D+A A ++++R I++++ + Sbjct: 387 DGALKAAAQLADRYINDRFLPDKAVD--LIDEAGA--RMRIKRMTAPKAIQDIDDKIAE- 441 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + K + A + + K LR E + L EE Sbjct: 442 ------VRRKKEAAIDDQDF-----------------EKAAALRDDE-----RKLGEERA 473 Query: 448 AQENSQC--DFDPMKMRMESEIRGL 470 +E + + D + E +I + Sbjct: 474 EKEKAWRAGELDEVAEVGEEQIAEV 498 >gi|461753|sp|P35100|CLPA_PEA ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplast precursor Length = 922 Score = 169 bits (429), Expect = 1e-40 Identities = 31/266 (11%), Positives = 82/266 (30%), Gaps = 38/266 (14%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + +I +D V + + + + Sbjct: 342 GTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGAIDAANILKPALARGEL 401 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+++ ++ EI ++ T Sbjct: 402 QCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETI--QILKGLRERYEIHHKLRYT 459 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ + A D L D A + ++++ + + +EL+ VR Sbjct: 460 DEALIAAAQLSYQYISDRFLPDKAID--LVD--EAGSRVRLQHAQLPEEAKELDKEVRKI 515 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + +E R + + L+ + + + + L E+ K Sbjct: 516 -------VKEKEEYVRNQD---------------FEKAGELRDKEMDLKAQISALIEKGK 553 Query: 448 AQENSQCD-FDPMKMRMESEIRGLLK 472 ++ + D + E +I+ ++ Sbjct: 554 EMSKAETETADEGPIVTEVDIQHIVS 579 >gi|42561142|ref|NP_975593.1| ATP dependant protease ClpB [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 713 Score = 169 bits (429), Expect = 1e-40 Identities = 33/272 (12%), Positives = 78/272 (28%), Gaps = 24/272 (8%) Query: 220 ELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSED--ARGKKLFWKADELIEKLKS 276 + + V +I +D + I G + + + + Sbjct: 103 YMGDYESRVKAVVNEIQKSNGEIILFIDELHLIVGAGRTGNNSGMDVSNLLKPALARGEL 162 Query: 277 ---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ P+++ ++ E V+ Sbjct: 163 KAIGSTTLNEYRQYIEKDAALERRFQRVLVSEPTIDQTI--SILRGLKDRFETYHGVRIH 220 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + + R A D L D+ACA ++ E +++++ V Sbjct: 221 DNALVSAVKLSSRYITDRYLPDKAID--LVDEACA--SIRTELASVPIELDQVNRKVMQL 276 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAEERRQYL 442 + E + + D+ +E K+ K R++ + + L Sbjct: 277 EIETSALEKEKDDKSKERWQEAKKELDSLKIEQASLNEKWEKEKEELSRINSVKSSIESL 336 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 +EL+ +N + S + L K + Sbjct: 337 KQELETAQNDGN-YKRAGEIQYSLLPSLEKSL 367 >gi|27467205|ref|NP_763842.1| endopeptidase [Staphylococcus epidermidis ATCC 12228] Length = 817 Score = 169 bits (429), Expect = 1e-40 Identities = 37/273 (13%), Positives = 80/273 (29%), Gaps = 45/273 (16%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 250 GTKYRGEFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGEL 309 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D P++E+ ++ E + + Sbjct: 310 QCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTI--EILKGLRDRYEAHHRINIS 367 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E A+ R A D L D A + ++++ ++E+E Sbjct: 368 DEALEAAAKLSDRYVSDRFLPDKAID--LID--EASSKVRLKSHTTPSNLKEIE------ 417 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 E D + + D A E LR +++ +QY + Sbjct: 418 -QEIDKVKNEKDAAVHAQEF-----------------ENAANLRDKQSKLEKQYEDAK-N 458 Query: 448 AQENSQCDFDPMKMRMESEIRGL---LKGMEMT 477 +N+Q D E I + G+ +T Sbjct: 459 EWKNAQGGLDTA--LSEENIAEVIAGWTGIPLT 489 >gi|4105131|gb|AAD02267.1| ClpC protease [Spinacia oleracea] Length = 891 Score = 169 bits (428), Expect = 1e-40 Identities = 37/268 (13%), Positives = 81/268 (30%), Gaps = 42/268 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + +I +D V + + + Sbjct: 341 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDRANILKPRFRRGEL 400 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+++ ++ EI ++ T Sbjct: 401 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETI--QILKGLRERYEIHHKLRYT 458 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ + A D L D+A + +++LES + Sbjct: 459 DEALVAAAQLSYQYISDRFLPDKAID--LIDEAGSRV--------LPSSLKKLESWL-QH 507 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEE 445 + E + +EA R + K +LR E + + L E+ Sbjct: 508 EKELRQLTKEKNEAVRGQDF-----------------EKAGELRDREMDLKAQISALVEK 550 Query: 446 LKAQENSQCD-FDPMKMRMESEIRGLLK 472 K ++ + D M ES+I+ ++ Sbjct: 551 KKEMSKAETEAGDVGPMVTESDIQHIVS 578 >gi|67935560|ref|ZP_00528580.1| AAA ATPase, central region:Clp, N terminal [Chlorobium phaeobacteroides DSM 266] Length = 452 Score = 169 bits (428), Expect = 2e-40 Identities = 26/194 (13%), Positives = 57/194 (29%), Gaps = 16/194 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + Sbjct: 261 GAKFRGEFEERLKAVVKEVQSAAGEIILFIDEIHLLVGAGSAEGSMDAANILKPALARGE 320 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ D PS+E+ ++ EI V+ Sbjct: 321 LRCIGATTLDEYRKHIEKDAALERRFQTVLVDQPSVEDT--VSILRGLKEKYEIHHGVRI 378 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + AE R A D L D A + L++E +++ L +R Sbjct: 379 KDAALVAAAELSDRYIADRFLPDKAID--LID--EASSRLRLEIDSSPEELDRLNREIRR 434 Query: 387 KQAEADMFQLKADE 400 + E + + + + Sbjct: 435 LEIEREALKREIEA 448 >gi|71149796|ref|ZP_00648718.1| AAA ATPase, central region:Clp, N terminal [Thiomicrospira denitrificans ATCC 33889] Length = 858 Score = 168 bits (427), Expect = 2e-40 Identities = 31/271 (11%), Positives = 70/271 (25%), Gaps = 21/271 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + +I +D + I + + + Sbjct: 249 GAKYRGEFEDRLKAVIDEVKKSGNVILFIDEIHTIVGAGASEGSMDAANILKPALARGEL 308 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I + + F + D PS+ ++ E V T Sbjct: 309 HTIGATTLKEYRKYFEKDMALQRRFLPINLDEPSVNQTL--QILRGIKERLETHHNVTIT 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D A +LKM+ + + ++ + + Sbjct: 367 DSALVAAAKLSDRYIADRFLPDKAID--LID--EAAAELKMQIETEPNVLKSAKIKISEL 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKL---RLSEAEERRQYL 442 E + +++ + + +++ K ++S + + Sbjct: 423 SVEQEALKMEDSPSNTKRLEEIKKELADEQERVRTLQAQFSNEKEVFGKISSIKNEIEAK 482 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKG 473 E S +F+ EI L+ Sbjct: 483 KREAHIA-KSTSEFNRAAEIEYGEIPALITQ 512 >gi|54022379|ref|YP_116621.1| putative Clp protease [Nocardia farcinica IFM 10152] Length = 851 Score = 168 bits (427), Expect = 2e-40 Identities = 33/265 (12%), Positives = 73/265 (27%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + + + + Sbjct: 255 GSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGEL 314 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P++E+ ++ E V T Sbjct: 315 QTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTI--NILKGLRDRYEAHHRVSIT 372 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D+A A +++ R P + E + + Sbjct: 373 DGALVAAATLADRYINDRFLPDKAID--LIDEAGA--RMRIRRMTAPPDLREFDDKIAD- 427 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + + A + RL + E++ E + Sbjct: 428 ------ARREKESAIDAQDF-------------------EKAARLRDKEKQLVAKRAERE 462 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 Q S D D + + +I +L Sbjct: 463 KQWRSG-DLDVVAEVDDEQIAEVLA 486 >gi|67465519|ref|XP_648944.1| AAA family ATPase, putative [Entamoeba histolytica HM-1:IMSS] Length = 866 Score = 168 bits (427), Expect = 2e-40 Identities = 40/277 (14%), Positives = 76/277 (27%), Gaps = 25/277 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 F + + + + +I +D + + ++ + Sbjct: 246 GAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANILKPMLSRG 305 Query: 275 KSKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + I + FQ+ PS+E+ +++ E + Sbjct: 306 ELRCIGATTLEEYRKYVEKDPAFERRFQQVYVSEPSVEDTL--YILRGIREKYENHYGLT 363 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R A D L D+ACA L ++ + +I+ LE Sbjct: 364 ITDSALVSAATLSKRYINGRFLPDKAID--LVDEACA--TLFTQKNSQPEEIDRLERRET 419 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--------SEAEE 437 E + + E E + K KLR+ SE + Sbjct: 420 QINVEKIALEREVKETDEEHKKVIEERLKEIEKEMSENKEKLTKLRINYEKEKGGSEEMK 479 Query: 438 RRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 E +K + S D + I K M Sbjct: 480 ELATKIESMKHKAESTKDLEVAADLKYYAIPEAEKRM 516 >gi|21203645|dbj|BAB94345.1| endopeptidase [Staphylococcus aureus subsp. aureus MW2] Length = 818 Score = 168 bits (427), Expect = 2e-40 Identities = 35/273 (12%), Positives = 77/273 (28%), Gaps = 45/273 (16%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 250 GTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGEL 309 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D PS+ + ++ E + + Sbjct: 310 QCIGATTLDEYRKNIEKDAALERRFQPVQVDEPSVVDTVA--ILKGLRDRYEAHHRINIS 367 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D L D A + ++++ ++E+E Sbjct: 368 DEAIEAAVKLSNRYVSDRFLPDKAID--LID--EASSKVRLKSHTTPNNLKEIE------ 417 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 E + + + D A E LR + + +QY E Sbjct: 418 -QEIEKVKNEKDAAVHAQEF-----------------ENAANLRDKQTKLEKQY-EEAKN 458 Query: 448 AQENSQCDFDPMKMRMESEIRGL---LKGMEMT 477 +N+Q E +I + G+ +T Sbjct: 459 EWKNAQNGMSTS--LSEEDIAEVIAGWTGIPLT 489 >gi|41326857|emb|CAF20701.1| PROBABLE ATP-DEPENDENT PROTEASE (HEAT SHOCK PROTEIN) [Corynebacterium glutamicum ATCC 13032] Length = 925 Score = 168 bits (426), Expect = 3e-40 Identities = 30/267 (11%), Positives = 72/267 (26%), Gaps = 46/267 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + + + + Sbjct: 277 GSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGEL 336 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS++ ++ E V T Sbjct: 337 QTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDLT--VEILKGLRDRYEAHHRVSIT 394 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D+A A ++++R + E++ + Sbjct: 395 DGALTAAAQLADRYINDRFLPDKAVD--LIDEAGA--RMRIKRMTAPSSLREVDERIAD- 449 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + + A + + + ++ + L EE Sbjct: 450 ------VRREKEAAIDAQDF----------------------EKAAGLRDKERKLGEERS 481 Query: 448 AQENSQCDFDPM--KMRMESEIRGLLK 472 +E D E +I +L Sbjct: 482 EKEKQWRSGDLEDIAEVGEEQIAEVLA 508 >gi|21675087|ref|NP_663152.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Chlorobium tepidum TLS] Length = 442 Score = 168 bits (426), Expect = 3e-40 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 16/194 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + +I +D + + + + + Sbjct: 251 GTKFRGEFEERLKALVKEVQASDGEVILFIDELHLLVGAGSAEGSMDAANILKPALARGE 310 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ D PS+E+ ++ EI V+ Sbjct: 311 LRCIGATTLDEYRKHIEKDAALERRFQTVIVDQPSVEDT--VSILRGLKEKYEIHHGVRI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + AE R A D L D+AC + L++E + +++ + +R Sbjct: 369 KDAALVAAAELSNRYIADRFLPDKAID--LIDEAC--SRLRLEIDSEPEELDRINRELRR 424 Query: 387 KQAEADMFQLKADE 400 + E + + + + Sbjct: 425 LEIEREALKRELEA 438 >gi|71482382|ref|ZP_00662075.1| AAA ATPase, central region:Clp, N terminal [Prosthecochloris vibrioformis DSM 265] Length = 442 Score = 168 bits (425), Expect = 4e-40 Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 16/196 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + D +I +D + + + + + Sbjct: 251 GAKFRGEFEDRLKAVVREVQDSNGEVILFIDELHLLVGAGSAEGSMDAANILKPALARGE 310 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ D PS+E+ ++ EI V+ Sbjct: 311 LRCIGATTLDEYRKHIEKDAALERRFQTVVVDQPSVEDT--VSILRGLKEKYEIHHGVRI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + AE R A D L D A + L++E +++ L +R Sbjct: 369 KDSAIVAAAELSNRYIADRFLPDKAID--LID--EASSRLRLEIDSSPEELDRLNREIRR 424 Query: 387 KQAEADMFQLKADEAR 402 + E + + + D Sbjct: 425 LEIEREALKRELDPGS 440 >gi|67463114|ref|XP_648214.1| HSP101-related protein [Entamoeba histolytica HM-1:IMSS] Length = 842 Score = 168 bits (425), Expect = 4e-40 Identities = 40/277 (14%), Positives = 76/277 (27%), Gaps = 25/277 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 F + + + + +I +D + + ++ + Sbjct: 246 GAQYRGQFEERLKAVIKEVKESKIPIILFIDEIHTVLGAGATGEGAMDAANILKPMLSRG 305 Query: 275 KSKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + I + FQ+ PS+E+ +++ E + Sbjct: 306 ELRCIGATTLEEYRKYVEKDPAFERRFQQVYVSEPSVEDTL--YILRGIREKYENHYGLT 363 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + A R A D L D+ACA L ++ + +I+ LE Sbjct: 364 ITDSALVSAATLSKRYINGRFLPDKAID--LVDEACA--TLFTQKNSQPEEIDRLERRET 419 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--------SEAEE 437 E + + E E + K KLR+ SE + Sbjct: 420 QINVEKIALEREVKETDEEHKKVIEERLKEIEKEMSENKEKLTKLRINYEKEKGGSEEMK 479 Query: 438 RRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 E +K + S D + I K M Sbjct: 480 ELATKIESMKHKAESTKDLEVAADLKYYAIPEAEKRM 516 >gi|57228420|gb|AAW44877.1| chaperone, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 834 Score = 167 bits (424), Expect = 5e-40 Identities = 34/268 (12%), Positives = 79/268 (29%), Gaps = 19/268 (7%) Query: 221 LFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS--- 276 F + +I +D + + + + + Sbjct: 165 RGEFESRFKSLLKDIEEEEGNVIVFIDELHTLLNLGKAEGSLDAGNMIKPALARGLQLVG 224 Query: 277 -----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 + ++ + FQ + PS+E+ ++ + E+ VQ + Sbjct: 225 ATTLDEYRKSIEKDAALQRRFQPIMINEPSVESTI--SILRGLKSRFEVHFGVQIADSAL 282 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 A R A D L D+A + LK+ ++ + ++E+L+ + E Sbjct: 283 VTAAVYSDRYISDRFLPDKAID--LVDEASSA--LKLAQESRPTELEKLDRETVTLEIER 338 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFEELKAQ 449 + + + D + + R AE + ++ + + Sbjct: 339 ESLKNEEDPFSVSRMEKVEKELEEKKQEQRRLADLWAQERERVAEIKGIKEQIEQANVDL 398 Query: 450 ENSQC--DFDPMKMRMESEIRGLLKGME 475 EN+Q +F+ S I L + Sbjct: 399 ENAQRNGEFEKASKLRFSTIPQLQAKLP 426 >gi|62998570|gb|AAF01451.2| HSP100 [Pleurotus sajor-caju] Length = 902 Score = 167 bits (423), Expect = 7e-40 Identities = 34/279 (12%), Positives = 74/279 (26%), Gaps = 27/279 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEA-----LIKELDFVRKIF-RGSEDARGKKLFWKADEL 270 + + + +I D + I + G L Sbjct: 266 GAKYKGEYEERIKAVLNEVEKASEDGGPGVILFADELHLIMAGRGAEGGGMDAANLFKPL 325 Query: 271 IEKLKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIA 321 + + K + I ++ + F + + PS+ ++ E+ Sbjct: 326 LARGKLRCIGATTLAEYRKYIETDAALERRFAQVLVNEPSVLETI--SILRGIREKYEVH 383 Query: 322 EVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELE 381 V+ + A R R A D L D+ACA +++ R+ + I++L+ Sbjct: 384 HGVRILDGALIQAATLAHRYLTSRRLPDAAID--LVDEACA--SVRVNRETEPEAIDKLQ 439 Query: 382 SIVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEE---- 437 + E + + D A +E + + ++ Sbjct: 440 RKRLELEIEIHALEREKDAASKERLQAAKKAISDVDEELQPLQAAFQAEKMRGDNSTFCG 499 Query: 438 -RRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 R LK D + + +E Sbjct: 500 GRWTNSRRRLKRLSE-DRDITTASDLKFYAVPEVQARIE 537 >gi|15827032|ref|NP_301295.1| putative ATP-dependent Clp protease [Mycobacterium leprae TN] Length = 848 Score = 167 bits (422), Expect = 8e-40 Identities = 35/264 (13%), Positives = 73/264 (27%), Gaps = 42/264 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + + + + Sbjct: 258 GSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGEL 317 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P++E+ ++ E V T Sbjct: 318 QTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTI--EILKGLRDRYEAHHRVSIT 375 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 M A R A D L D+A A +++ R P + E + + Sbjct: 376 DSAMVAAATLADRYINDRFLPDKAID--LIDEAGA--RMRIRRMTAPPDLREFDEKIAE- 430 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + + A + K LR E++ E + Sbjct: 431 ------ARREKESAIDAQDF-----------------EKAASLRDR--EKQLVAQRAERE 465 Query: 448 AQENSQCDFDPMKMRMESEIRGLL 471 Q S D D + + +I +L Sbjct: 466 KQWRSG-DLDVIAEVDDEQIAEVL 488 >gi|50955646|ref|YP_062934.1| ATP-dependent Clp protease, ATP-binding subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 839 Score = 167 bits (422), Expect = 8e-40 Identities = 35/268 (13%), Positives = 70/268 (26%), Gaps = 46/268 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + L+ + + Sbjct: 255 GSRYRGDFEERLKKVTKEIRTRGDIITFIDEIHTLVGAGAAEGAIDAASILKPLLARGEL 314 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I + + FQ + PSL + ++ E V T Sbjct: 315 QTIGATTLDEYRKHFEKDAALERRFQPIQVNEPSLPHTI--NILKGLRDRYEAHHKVSIT 372 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R + A D L D+A A L++ P++ + + + + Sbjct: 373 DGAIVSAANLADRYIQDRFLPDKAID--LIDEAGA--RLRLSILSAPPELRKFDDKIAVV 428 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 +++ + D K LR E + L E Sbjct: 429 RSQKEAAIEDQD------------------------FEKAASLRDEE-----KNLLGERL 459 Query: 448 AQENSQCDFDPM--KMRMESEIRGLLKG 473 E D E I +L Sbjct: 460 RLEKQWRSGDVKTTAEVDEGLIAEVLAQ 487 >gi|68553506|ref|ZP_00592879.1| AAA ATPase, central region:Clp, N terminal [Prosthecochloris aestuarii DSM 271] Length = 439 Score = 166 bits (421), Expect = 9e-40 Identities = 26/191 (13%), Positives = 56/191 (29%), Gaps = 16/191 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + D +I +D + + + + + Sbjct: 251 GAKFRGEFEDRLKAVVKEVQDANGEVILFIDELHLLVGAGSAEGAVDAANILKPALARGE 310 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ D PS+E+ ++ EI V+ Sbjct: 311 LRCIGATTLDEYRKYIEKDAALERRFQTVIVDQPSVEDTI--SILRGLKEKYEIHHGVRV 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + AE R A D L D A + L++E +++ + +R Sbjct: 369 KDSAIVAAAELSNRYISDRFLPDKAID--LID--EASSRLRLEIDSDPEELDRVNREIRR 424 Query: 387 KQAEADMFQLK 397 + E + + + Sbjct: 425 LEIEREALKRE 435 >gi|71024695|ref|XP_762577.1| hypothetical protein UM06430.1 [Ustilago maydis 521] Length = 918 Score = 166 bits (421), Expect = 1e-39 Identities = 35/277 (12%), Positives = 82/277 (29%), Gaps = 24/277 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEA----LIKELDFVRKIF-RGSEDARGKKLFWKADELI 271 + + V A A I +D + + G ++ Sbjct: 260 GAKYRGEYEERVKSVLADIEKMTADGTPCILFIDEMHLLMAGQGSSGGGMDAANLLKPML 319 Query: 272 EKLKSKLID---------PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAE 322 + K ++I ++ + FQ + P++E+ ++ E+ Sbjct: 320 ARGKLRVIGCTTANEYRQYIEKDAALERRFQSILVNEPTVEDCIA--ILRGIRDKYEVHH 377 Query: 323 VVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELES 382 V+ + A+ R R A D L D+ACA D+++ R+ ++++LE Sbjct: 378 GVRILDSAIVSAAQLAKRYLTDRRLPDSAID--LVDEACA--DVRVSRETVPEEVDKLER 433 Query: 383 IVRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS--KYLKLRLSEAEERRQ 440 + + D +++ + + K + E R+ Sbjct: 434 KRLQLEIAVHALSREKDAQSKQSLEETKKQIQAIDDELAPIKAAFEAQKAKGEEINTVRR 493 Query: 441 YLFEELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 + E ++ +D + L + Sbjct: 494 KMEEVRAKIAEAERRYDLATASDLKFYALPDLEAKLN 530 >gi|20808693|ref|NP_623864.1| ATPases with chaperone activity, ATP-binding subunit [Thermoanaerobacter tengcongensis MB4] Length = 816 Score = 166 bits (420), Expect = 1e-39 Identities = 39/265 (14%), Positives = 78/265 (29%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + +I +D + + + + + Sbjct: 252 GTKYRGEFEDRLKTVINEVIKAGNVILFVDEMHTLIGAGAAEGAIDASNILKPALARGEI 311 Query: 277 KLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 ++I + + FQ + P++E ++ E V+ T Sbjct: 312 QVIGATTLDEYRKYVERDPALERRFQPIMVEEPTVEETI--EILKGLRDKYEAHHRVKIT 369 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E A+ R A D L D A + ++++ P+I+ELE + Sbjct: 370 DEALEAAAKLSHRYITDRFLPDKAID--LID--EAASRVRLKTVTAPPEIKELEDKINDL 425 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + +EA R E ++ + E++ + EELK Sbjct: 426 I-------KEKEEAIRTQEY-------------------EKAAKIRDEEQKLREQLEELK 459 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 A+ Q K EI ++ Sbjct: 460 AKWQ-QNSLSEEKSVGPEEIAQVVS 483 >gi|38234547|ref|NP_940314.1| ATP-dependent Clp protease ATP-binding subunit [Corynebacterium diphtheriae NCTC 13129] Length = 883 Score = 164 bits (416), Expect = 4e-39 Identities = 30/266 (11%), Positives = 71/266 (26%), Gaps = 46/266 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + + + + Sbjct: 276 GSRYRGDFEERLKKVLKEINQRGDIILFIDEIHTLVGAGAAEGAIDAASLLKPKLARGEL 335 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS++ ++ E V T Sbjct: 336 QTIGATTLDEYRKHIEKDAALERRFQPVQVPEPSVDMTI--EILKGLRDRYEAHHRVSIT 393 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D+A A ++++R I +++ + Sbjct: 394 DGALAAAAQLSDRYINDRFLPDKAVD--LIDEAGA--RMRIKRMTAPESIRKVDDQIAE- 448 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + + A + + + + + L EE Sbjct: 449 ------VRREKEAAIDAQDF----------------------EKAAGLRDTERKLGEERA 480 Query: 448 AQENSQCDFDPM--KMRMESEIRGLL 471 +E D E +I +L Sbjct: 481 EKEKQWRSGDLEDIAEVGEEQIAEVL 506 >gi|70727483|ref|YP_254399.1| endopeptidas Clp ATP-binding chain C [Staphylococcus haemolyticus JCSC1435] Length = 824 Score = 164 bits (416), Expect = 4e-39 Identities = 33/271 (12%), Positives = 75/271 (27%), Gaps = 41/271 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 250 GTKYRGEFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGEL 309 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D P++E+ ++ E + + Sbjct: 310 QCIGATTLDEYRKNIEKDAALERRFQPIQVDEPTVEDTIA--ILKGLRDRYEAHHRINIS 367 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E A+ A D L D A + ++++ ++E+E Sbjct: 368 DEALEAAAKLSDCYVSDRFLPDKAID--LID--EASSKVRLKSHTTPNNLKEIE------ 417 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 E + + + D A E LR + + +QY + + Sbjct: 418 -QEIEKVKNEKDAAVHAQEF-----------------ENAANLRDKQTKLEKQYEDAKNE 459 Query: 448 -AQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 K + I G G+ +T Sbjct: 460 WKTTQGDQSTSLSKEDIGEVIAG-WTGIPLT 489 >gi|73663540|ref|YP_302321.1| putative stress response-related Clp ATPase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 820 Score = 164 bits (416), Expect = 4e-39 Identities = 35/273 (12%), Positives = 78/273 (28%), Gaps = 45/273 (16%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 250 GTKYRGEFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGEL 309 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D P++E+ ++ E + + Sbjct: 310 QCIGATTLDEYRKNIEKDAALERRFQPVQVDEPTVEDTI--EILKGLRDRYEAHHRINIS 367 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D A + ++++ P ++E+E + Sbjct: 368 DEALVSAAKLSHRYVSDRFLPDKAID--LID--EASSKVRLKSHTTPPNLKEIEQQIEQ- 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + D A E LR + + +QY EE Sbjct: 423 ------VKNEKDAAVHAQEF-----------------ENAANLRDKQTKLEKQY--EEAN 457 Query: 448 AQENSQCDFDPMKMRMESEIRGL---LKGMEMT 477 + + D E +I + G+ +T Sbjct: 458 TNWKNTQNGDNTS-LSEEDIGEVIAGWTGIPLT 489 >gi|71367651|ref|ZP_00658171.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Nocardioides sp. JS614] Length = 861 Score = 164 bits (416), Expect = 4e-39 Identities = 31/265 (11%), Positives = 69/265 (26%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + ++ +D + + ++ + + Sbjct: 258 GSRYRGDFEERLKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGEL 317 Query: 277 KLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I + + FQ PS+ + ++ E V T Sbjct: 318 QTIGATTLDEYRKYLEKDAALERRFQPIQVAEPSIAHTI--EMLKGLRDRYEAHHRVTIT 375 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + L++ R + E + + Sbjct: 376 DEALVSAATLADRYISDRFLPDKAID--LID--EAGSRLRIRRMTAPADLREYDDKIGE- 430 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + + A + RL + E++ E + Sbjct: 431 ------VRQRKEAAIDGQDF-------------------EAAARLRDEEKQLILKKSERE 465 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 Q + D D + E I +L Sbjct: 466 KQWRAG-DMDEVAEVDEELIAEVLA 489 >gi|67914654|gb|EAM63991.1| AAA ATPase, central region:Clp, N terminal [Chlorobium phaeobacteroides BS1] Length = 439 Score = 164 bits (415), Expect = 5e-39 Identities = 26/191 (13%), Positives = 58/191 (30%), Gaps = 16/191 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + D +I +D + + + + + Sbjct: 251 GAKFRGEFEDRLKAVVKEVQDANGEVILFIDEMHLLVGAGSAEGAVDAANILKPALARGE 310 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ D PS+E+ ++ EI V+ Sbjct: 311 LRCIGATTLDEYRKHIEKDAALERRFQTVIVDQPSVEDT--VSILRGLKEKYEIHHGVRI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + AE R + A D L D A + L++E +++++ +R Sbjct: 369 LDSAIIAAAELSDRYISERFLPDKAID--LID--EASSRLRLEMDSDPEELDKVNREIRR 424 Query: 387 KQAEADMFQLK 397 + E + + + Sbjct: 425 LEIEREALKRE 435 >gi|72163275|ref|YP_290932.1| ATPase [Thermobifida fusca YX] Length = 830 Score = 164 bits (415), Expect = 5e-39 Identities = 31/265 (11%), Positives = 72/265 (27%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + ++ + + Sbjct: 254 GSRYRGDFEERLRKVLKEIRSRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGEL 313 Query: 277 KLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I + + FQ + P++ + ++ E V T Sbjct: 314 QTIGATTLDEYRKYLEKDAALERRFQPIQVEEPTISHTI--EILKGLRDRYEAHHRVSIT 371 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D A + +++ R P + E + + Sbjct: 372 DGALVAAAQLADRYISDRYLPDKAID--LID--EAGSRMRIRRMTAPPDLREFDEKIAK- 426 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + A + + LR E+R Q + + Sbjct: 427 ------VRRDKEAAIDAQDF-----------------ERAAALRDE--EKRLQAQRAQKE 461 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 + + D D + E I +L Sbjct: 462 KEWKAG-DMDTVAEVNEELIAEVLA 485 >gi|23612849|ref|NP_704388.1| hypothetical protein [Plasmodium falciparum 3D7] Length = 1070 Score = 164 bits (415), Expect = 6e-39 Identities = 34/327 (10%), Positives = 81/327 (24%), Gaps = 74/327 (22%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKL 274 F + + D ++ +D + + ++ + Sbjct: 401 GAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARG 460 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + I ++ + FQ+ + PS++ ++ E+ V+ Sbjct: 461 ELRCIGATTVSEYRQFIEKDKALERRFQQILVEQPSVDETI--SILRGLKERYEVHHGVR 518 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + A R A D L D A ++LK++ K Q+E +E + Sbjct: 519 ILDSALVQAAVLSDRYISYRFLPDKAID--LID--EAASNLKIQLSSKPIQLENIEKQLI 574 Query: 386 LKQAEADMFQLKADE-----------------------------ARREAEXXXXXXXXXX 416 + E + E E Sbjct: 575 QLEMEKISILGDKQKNLFNYSSVANTHNNNNNSSISSNNSSSYGNAEETEATVDYTKSPN 634 Query: 417 XXXXXXYTSKYLKLR-----LSEAEERRQYLFEEL---------------------KAQE 450 + +L+ +SE + ++ + + E Sbjct: 635 FLKKRINEKEIDRLKMIDRIMSELRKEQRKILDSWSTEKSYVDNIRAIKERIDVVKIEIE 694 Query: 451 NSQCDFDP--MKMRMESEIRGLLKGME 475 ++ FD + L K ++ Sbjct: 695 KAERYFDLNRAAELRFETLPDLEKQLK 721 >gi|23336357|ref|ZP_00121578.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Bifidobacterium longum DJO10A] Length = 869 Score = 163 bits (414), Expect = 8e-39 Identities = 33/250 (13%), Positives = 79/250 (31%), Gaps = 44/250 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + ++ +D + I ++ + + Sbjct: 262 GSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGEL 321 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P++ ++ + E V T Sbjct: 322 QTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETI--EILKGLRSRYENHHHVTIT 379 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ AE R + A D L D+A A L+++R P+++EL+ + Sbjct: 380 DGALQSAAELSSRYIQDRNLPDKAID--LIDEAGA--RLRIKRLTAPPELKELDEKIAKI 435 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 A DEA + + + +E ++++ L + K Sbjct: 436 AA-------DKDEAIKGQDF----------------------EKAAELRDKQEKLEADRK 466 Query: 448 AQENSQCDFD 457 +E+S + + Sbjct: 467 QKEDSWREGE 476 >gi|71071100|ref|XP_768118.1| heat shock protein [Giardia lamblia ATCC 50803] Length = 882 Score = 163 bits (413), Expect = 8e-39 Identities = 26/278 (9%), Positives = 72/278 (25%), Gaps = 25/278 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + I +D + + + + + Sbjct: 248 GAQYRGQFEERLKAILDELKKSEGNSILFIDEIHTLIGAGGSKGTSDAANLLKPALARGE 307 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + F E P++E+ ++ + ++ Sbjct: 308 IRCIGATTTEEYRNHIASDRAFERRFAEVFVAEPNVEDTI--SILRGLSGRYQSHHQIRI 365 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + A+ R D ++ A +++ + Q++ L Sbjct: 366 TDGALVAAAQLANRYV--RAMGRHNPDAAIDLLDEAGASVRVTLDSQPAQLDALNRKKLR 423 Query: 387 KQAEADMFQLK-----ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-----RLSEAE 436 Q E + + + AD + + +Y + ++S + Sbjct: 424 LQIEEEALRRESEARNADSSISKRLADIIKEISNIDMQIKPLEEQYNRERSSIDKISNIK 483 Query: 437 ERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 R L ++L+ ++ + I L + Sbjct: 484 ARITALEDKLEVY-TTRGEVSKAADLQYGAIPELRDEL 520 >gi|44985843|gb|AAS54454.1| AGL036Cp [Ashbya gossypii ATCC 10895] Length = 904 Score = 163 bits (413), Expect = 9e-39 Identities = 44/274 (16%), Positives = 82/274 (29%), Gaps = 26/274 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALI-KELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + + LI +D + + +D + + + Sbjct: 254 GAKYKGDFEERLKGVLKEIEESKTLIVLFIDEIHMLMGNGKD----DAANIMKPALSRGQ 309 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K+I + FQ+ D P++ ++ EI V+ Sbjct: 310 LKVIGATTNNEYRAIVEKDGAFERRFQKIDVAEPTVRQTIA--ILRGLQGKYEIHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R R A D L D ACA + + R K +++ E ++L Sbjct: 368 LDSALVSAAQLAKRYLPYRRLPDSAID--LVDIACAG--VAVARDSKPEELDSKERELQL 423 Query: 387 KQAEADMFQLKA--DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY-LF 443 Q E + D +E +Y + R S E + Sbjct: 424 IQVEINALDRDKDSDPTTKERLMQAKQKEASLMEELEPLRQRYEEERRSHEELTKAKAKL 483 Query: 444 EELK--AQENSQC-DFDPMKMRMESEIRGLLKGM 474 EEL+ A + + D+ I L K + Sbjct: 484 EELENKALDAERRHDYGTAADIRYFAIPDLRKRI 517 >gi|50841767|ref|YP_054994.1| putative Clp-family ATP-binding protease [Propionibacterium acnes KPA171202] Length = 844 Score = 163 bits (413), Expect = 9e-39 Identities = 35/267 (13%), Positives = 73/267 (27%), Gaps = 46/267 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + + +I +D + + ++ + + Sbjct: 257 GSRYRGDFEERMKKVLKEIKNRGDIILFIDEIHTLVGAGAAEGAIDAASMLKPMLARGEL 316 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D PS+ ++ E + T Sbjct: 317 QTIGATTLDEYRKYIEKDAALERRFQPIQVDEPSIP--LAIEILKGLRDRYEAHHKITIT 374 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R + A D L D+A A +++ R P + E + + Sbjct: 375 DEAITSAANLASRYIQDRFLPDKAID--LIDEAGARMNIR--RMTAPPDLREFDERIARV 430 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + E + D + LR E + L E + Sbjct: 431 RVEKEAAIDAQD------------------------FERAAGLRDDE-----KKLLAERE 461 Query: 448 AQENSQCDFDPM--KMRMESEIRGLLK 472 A+E D + EI +L Sbjct: 462 AKEEEWKQGDESVPAVVGPDEIAEVLS 488 >gi|75760630|ref|ZP_00740659.1| Negative regulator of genetic competence clpC/mecB [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 811 Score = 163 bits (413), Expect = 1e-38 Identities = 36/273 (13%), Positives = 74/273 (27%), Gaps = 45/273 (16%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 251 GTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGEL 310 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D PSLE ++ E V T Sbjct: 311 QCIGATTLDEYRKYIEKDAALERRFQPIHVDEPSLEESI--QILKGLRDRYEAHHRVSIT 368 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ + R A D L D A + +++ P ++ELE Sbjct: 369 DDAIDAAVKLSDRYITDRFLPDKAID--LID--EAASKVRLRSYTTPPNLKELE------ 418 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + + + D A + E L + E+R + E+ K Sbjct: 419 -VKLEEIRKEKDAAVQSQEF-------------------EKAASLRDMEQRLREKLEDTK 458 Query: 448 AQENSQCDFDPMKMRMESEIRGL---LKGMEMT 477 Q Q +I + + ++ Sbjct: 459 RQWKEQQ-GKENSEVTVEDIANVVSTWTRIPVS 490 >gi|37521633|ref|NP_925010.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC 7421] Length = 819 Score = 163 bits (412), Expect = 1e-38 Identities = 31/261 (11%), Positives = 72/261 (27%), Gaps = 41/261 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + ++ +D V + + + + Sbjct: 249 GTKYRGEFEERLKKIMDEIRAAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 308 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+++ ++ E ++ T Sbjct: 309 QCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETI--EILRGLRERYEQHHKLKIT 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D A + +++ + P +EL+ +R Sbjct: 367 DEALIAAAQLSDRYISDRYLPDKAID--LVD--EAGSRVRLLSSQLPPAAKELDKELRQI 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + D+A R + + +LR E E + + Sbjct: 423 L-------KEKDDAVRGQDY-----------------ERAGELRDREME--IKSQIRSIA 456 Query: 448 AQENSQCDFDPMKMRMESEIR 468 S+ + E +I Sbjct: 457 QARKSETANEESPNVTEEDIA 477 >gi|68268640|ref|ZP_00574909.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Moorella thermoacetica ATCC 39073] Length = 840 Score = 162 bits (411), Expect = 1e-38 Identities = 24/201 (11%), Positives = 59/201 (29%), Gaps = 17/201 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 281 GTKYRGEFEERFKKVMDEVRAAGNVILFIDELHTLIGAGAAEGAIDAANILKPALARGEL 340 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ + P++E ++ E V+ T Sbjct: 341 QTIGATTIDEYRKHIERDAALERRFQAVMVEEPTVEETIA--ILKGLRDRYEAHHRVKIT 398 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E A R A D L D A + ++++ +++LE+ + Sbjct: 399 DEALEAAARLSDRYITDRYLPDKAID--LVD--EAGSRVRLKVYTAPDDVKKLEARLEEL 454 Query: 388 QAEADMF--QLKADEARREAE 406 + E + ++A + Sbjct: 455 EKEKAAAVNAQEFEKAATLRD 475 >gi|17132093|dbj|BAB74698.1| endopeptidase Clp ATP-binding chain [Nostoc sp. PCC 7120] Length = 839 Score = 162 bits (411), Expect = 2e-38 Identities = 32/265 (12%), Positives = 74/265 (27%), Gaps = 40/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 265 GTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 324 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS++ ++ E ++ + Sbjct: 325 QCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETI--EILYGLRDRYEQHHKLKIS 382 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D A + +++ + P +EL+ +R Sbjct: 383 DEALVAAAKLSDRYISDRYLPDKAID--LVD--EAGSRVRLMNSQLPPAAKELDKELRQI 438 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + D+A R + + +LR E E + + Sbjct: 439 L-------KEKDDAVRSQDFD-----------------RAGELRDREMEIKAEIRAIAQS 474 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 S + + E +I ++ Sbjct: 475 KTNASGTEGQE-PVVTEEDIAHIVA 498 >gi|16331384|ref|NP_442112.1| ATP-dependent Clp protease regulatory subunit [Synechocystis sp. PCC 6803] Length = 821 Score = 162 bits (411), Expect = 2e-38 Identities = 34/265 (12%), Positives = 77/265 (29%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 250 GTKYRGEFEERLKKIMDEIRQAGNIILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 309 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+E ++ E ++ Sbjct: 310 QCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETI--EILYGLRERYEQHHKLKIL 367 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E A+ R A D L D A + +++ + P +EL+ +R Sbjct: 368 DEALEAAAKLSDRYISDRFLPDKAID--LID--EAGSRVRLINSQLPPAAKELDKELRQI 423 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + D+A R + + +L+ E E ++Q + Sbjct: 424 L-------KEKDDAVRNQDF-----------------EQAGELKDREDEIKKQIR--AIA 457 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 + + ++ D EI ++ Sbjct: 458 SSKKAEGDNGE-PEVTSEEIAHIVA 481 >gi|12045215|ref|NP_073026.1| ATP-dependent Clp protease, ATPase subunit (clpB) [Mycoplasma genitalium G-37] Length = 714 Score = 162 bits (411), Expect = 2e-38 Identities = 34/273 (12%), Positives = 83/273 (30%), Gaps = 26/273 (9%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGS--EDARGKKLFWKADELIEKLKSKLI 279 F K + + +I +D + +I + + ++ + + K+I Sbjct: 108 EFEKRINTILKQVKESNGRIILFIDEIHQIVGLGRNSSSGAMDIANILKPMLARGEIKVI 167 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ+ + PS + E ++ E+ + Sbjct: 168 GATTLKEYREYIEKDGALERRFQKILINEPS--SQEALTIMRGLKTRWELFHNITIFDSA 225 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + E R + A D L D A +K E + I+ L+ + + E Sbjct: 226 LVAAVEMSTRYINERNLPDKAID--LID--EAAAKIKTEMSSEPVAIDSLKREIINLETE 281 Query: 391 ADMFQLKADEARRE----AEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFE 444 + + ++ +++ K + + ++ + E Sbjct: 282 YAALKQDKENDNKQSKKEYLEKLKKQLDALKQKRDSLINEWKKEKADFENINKLKKEIEE 341 Query: 445 ELKAQENSQCD--FDPMKMRMESEIRGLLKGME 475 E Q + ++ + S+I L K +E Sbjct: 342 FQTKLETYQSEGNYESASKILYSDIPRLKKELE 374 >gi|44889002|sp|P31540|HSP98_NEUCR Heat shock protein HSP98 Length = 927 Score = 162 bits (411), Expect = 2e-38 Identities = 40/277 (14%), Positives = 74/277 (26%), Gaps = 24/277 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 + F + + E +I +D + + G ++ + Sbjct: 266 GSKYRGEFEERMKGVLKEISESKEMIILFIDEIHLLMGAGASGEGGMDAANLLKPMLARG 325 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + I ++ FQ+ PS+ ++ E+ V Sbjct: 326 QLHCIGATTLAEYRKYIEKDAAFERRFQQVIVKEPSVSETI--SILRGLKEKYEVHHGVT 383 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + + A R R A D L D+A A + E + I+ LE +R Sbjct: 384 ISDAAIVAAANLAARYLTSRRLPDSAID--LIDEAAAAVRVARE--SQPEIIDSLERKLR 439 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLS--EAEERRQYLF 443 + E + DEA + KY + + +E R L Sbjct: 440 QLKIEIHALSREKDEASKARLEQAKKDAENVEEELRPLREKYEQEKQRAKALQEARMKLE 499 Query: 444 EELKAQENSQCDFD--PMKMRMESEIRGLL---KGME 475 + E + D I K +E Sbjct: 500 SLRQKAEEASRMGDHSRAADLQYYAIPEQEAVIKRLE 536 >gi|49655166|emb|CAG87721.1| unnamed protein product [Debaryomyces hansenii CBS767] Length = 900 Score = 162 bits (410), Expect = 2e-38 Identities = 36/275 (13%), Positives = 78/275 (28%), Gaps = 26/275 (9%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + E +I +D + + + ++ + Sbjct: 253 GAKYKGEFEERIKGVLNDIEKSNEMIILFIDEIHMLMGDGKS----DAANLLKPMLARGS 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + FQ+ D + ++ ++ EI V+ Sbjct: 309 LHCIGATTFTEYRKFIAKDGAFERRFQKIDVPASTVPETVA--ILRGLQPRYEIHHGVRI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R A D L D + + R K +++ LE + L Sbjct: 367 LDSALVTAAQLASRYLTYRSLPDSAVD--LID--ETAATVAVARDSKPEELDTLERQLHL 422 Query: 387 KQAEADMFQL--KADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYL 442 + E + + +AD ++ ++ + R E ++ L Sbjct: 423 IEVEINALERDVEADADSKDRLEVAKRKKAELEEQLGPLRERFNQERAGHEELIAAKRKL 482 Query: 443 FE-ELKAQENSQC-DFDPMKMRMESEIRGLLKGME 475 E E+KA + + D I + K +E Sbjct: 483 DELEIKALDAERRHDTATAADLRYFAIPDVAKQIE 517 >gi|399213|sp|P31542|CLAB_LYCES ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplast precursor Length = 923 Score = 162 bits (410), Expect = 2e-38 Identities = 34/268 (12%), Positives = 83/268 (30%), Gaps = 42/268 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + +I +D V + + + + Sbjct: 342 GTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGEL 401 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+++ ++ EI ++ T Sbjct: 402 QCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETI--QILKGLRERYEIHHKLRYT 459 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ + A D L D A + +++ + + +ELE +R Sbjct: 460 DEDLVAAAQLSYQYISDRFLPDKAID--LID--EAGSRVRLRHAQLPEEAKELEKELRQI 515 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEA--EERRQYLFEE 445 + +EA R + K +LR E + + L ++ Sbjct: 516 -------TKEKNEAVRGQDF-----------------EKAGELRDREMDLKAQITALIDK 551 Query: 446 LKAQENSQCD-FDPMKMRMESEIRGLLK 472 K ++ + D + E++I+ ++ Sbjct: 552 NKEVSKAESEAADTGPLVTEADIQHIVS 579 >gi|66870181|gb|EAL97546.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Arthrobacter sp. FB24] Length = 830 Score = 162 bits (410), Expect = 2e-38 Identities = 35/267 (13%), Positives = 70/267 (26%), Gaps = 46/267 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + ++ + + Sbjct: 257 GSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGEL 316 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+ + ++ E V T Sbjct: 317 QTIGATTLDEYRKHIEKDAALERRFQPIQVKEPSVAH--AIEILKGLRDRYEAHHRVTIT 374 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D+A A L++ R P+++ ++ + Sbjct: 375 DGALASAANLSERYISDRFLPDKAID--LIDEAGA--RLRIRRMTAPPELKAMDERIAEL 430 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + E + D LR E Q L E Sbjct: 431 KMEKESAIDAQD------------------------FEGAASLRDKE-----QKLIAERA 461 Query: 448 AQENSQCDF--DPMKMRMESEIRGLLK 472 +E D + E I +L Sbjct: 462 EKERHWKTGGMDDISEVDEDLIAEVLA 488 >gi|62734176|gb|AAX96285.1| Clp amino terminal domain, putative [Oryza sativa (japonica cultivar-group)] Length = 932 Score = 160 bits (406), Expect = 5e-38 Identities = 27/209 (12%), Positives = 58/209 (27%), Gaps = 27/209 (12%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I LD V + + + + Sbjct: 351 GTKYRGEFEERLKKLMDEVKQNGEIILFLDEVHTLVGAGAAEGAIDAANILKPALARGEL 410 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+++ G ++ EI VQ T Sbjct: 411 QCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVDETIG--ILKGLRERYEIHHKVQYT 468 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQ----------- 376 + A + A D L D A + +++ + + Sbjct: 469 DESLIAAARLSYQYISDRFLPDKAID--LVD--EAGSLVRLRNAQLPDEAKELEKKLKKI 524 Query: 377 IEELESIVRLKQAEAD-MFQLKADEARRE 404 + E +R + E + + E + E Sbjct: 525 MAEKSEAIRSQDFEKAGALRGEEVELKSE 553 >gi|13357952|ref|NP_078226.1| ATP-dependent serine proteinase - heat shock protein [Ureaplasma parvum serovar 3 str. ATCC 700970] Length = 704 Score = 160 bits (406), Expect = 5e-38 Identities = 30/270 (11%), Positives = 81/270 (30%), Gaps = 25/270 (9%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLKSKLID 280 F + + +I +D + +I + + ++ + + KLI Sbjct: 105 QFEERINSILKEVKKADGNIILFIDEIHQIVGMGRNQGSNMDVANILKPMMARGEIKLIG 164 Query: 281 P---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + F + + P+++ ++ E ++ + Sbjct: 165 ATTLDEYRLYIEKDQALERRFTKVLVNKPTIQETLT--IMRGLKPRWEAFHGIKIHDNAL 222 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 R A D L D A +K + + ++E++ ++ Q E Sbjct: 223 IAAVNLSERYINDRNLPDKAID--LID--EAAAKIKTQINSQPIYLDEIKRDLQHLQTEK 278 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE- 450 + + DE + YLK + + + L ++++ + Sbjct: 279 AALEPEKDEKSIKRLNEILEKIKLKQDEFNNLNDLYLKEKKQI--DDLKNLRQKIERIQH 336 Query: 451 -----NSQCDFDPMKMRMESEIRGLLKGME 475 S+ ++ + S++ K E Sbjct: 337 DIEFYQSEGKYEKASRLLYSDLPLFEKQRE 366 >gi|2493732|sp|P71404|CLPB_HELPY Chaperone clpB Length = 856 Score = 160 bits (406), Expect = 6e-38 Identities = 31/272 (11%), Positives = 74/272 (27%), Gaps = 19/272 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + + +I +D + I G + + + Sbjct: 246 GAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGASEGGMDAANILKPALARGEL 305 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I + + FQ + PS+ E ++ E + Sbjct: 306 HTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSIN--EALQILRGLKETLETHHNITIN 363 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D+ LKM+ + + ++ ++ ++ Sbjct: 364 DSALIASAKLSSRYITDRFLPDKAID--LIDEG--AAQLKMQMESEPAKLSSVKRSIQRL 419 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFEE 445 + E +++ E+ + +++ + E + + Sbjct: 420 EMEKQALEMEKKESNAKRMQEILKELSDLKEEKIQLEAQFENEKEVFKEISRLKMEMESL 479 Query: 446 LKAQENSQC--DFDPMKMRMESEIRGLLKGME 475 K E + D+ S+I K E Sbjct: 480 KKEAERFKRNGDYQQAGEIEYSKIPENKKKEE 511 >gi|62734225|gb|AAX96334.1| Clp amino terminal domain, putative [Oryza sativa (japonica cultivar-group)] Length = 959 Score = 160 bits (406), Expect = 7e-38 Identities = 27/209 (12%), Positives = 58/209 (27%), Gaps = 27/209 (12%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I LD V + + + + Sbjct: 378 GTKYRGEFEERLKKLMDEVKQNGEIILFLDEVHTLVGAGAAEGAIDAANILKPALARGEL 437 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+++ G ++ EI VQ T Sbjct: 438 QCIGATTIDEYRKHIEKDPALERRFQPVKVPEPTVDETIG--ILKGLRERYEIHHKVQYT 495 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQ----------- 376 + A + A D L D A + +++ + + Sbjct: 496 DESLIAAARLSYQYISDRFLPDKAID--LVD--EAGSLVRLRNAQLPDEAKELEKKLKKI 551 Query: 377 IEELESIVRLKQAEAD-MFQLKADEARRE 404 + E +R + E + + E + E Sbjct: 552 MAEKSEAIRSQDFEKAGALRGEEVELKSE 580 >gi|33632641|emb|CAE07453.1| endopeptidase Clp ATP-binding chain C [Synechococcus sp. WH 8102] Length = 846 Score = 160 bits (405), Expect = 8e-38 Identities = 33/273 (12%), Positives = 77/273 (28%), Gaps = 40/273 (14%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 253 GTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 312 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ + PS+++ ++ E ++ T Sbjct: 313 QCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIDDTI--EILRGLRERYEQHHRLKIT 370 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + +++ K P+ +E++ Sbjct: 371 DDALVAAATLGDRYISDRFLPDKAID--LID--EAGSRVRLLNSKLPPEAKEVDK----- 421 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 E Q + ++A R+ + K ++LR + + Sbjct: 422 --ELRGVQKQKEDAVRDQD----------FTKAGELREKEVELRDQIRSLLQANRTDATA 469 Query: 448 AQEN--------SQCDFDPMKMRMESEIRGLLK 472 E + + M E +I ++ Sbjct: 470 VAEASADQSDAPAAESAESSPMVNEEDIAQIVA 502 >gi|50311735|ref|XP_455896.1| unnamed protein product [Kluyveromyces lactis] Length = 899 Score = 160 bits (405), Expect = 8e-38 Identities = 39/275 (14%), Positives = 79/275 (28%), Gaps = 23/275 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + + +I +D + + D + + Sbjct: 254 GAKYKGDFEERLKGVLKEIEESKTLIILFIDEIHMLMGQGVDD-SANAANILKPALSRGG 312 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K+I + FQ+ D P+ ++ EI V+ Sbjct: 313 LKVIGATTTNEYRSLVEKDGAFERRFQKIDVPEPTTRQTVA--ILRGLQPKYEIHHGVRI 370 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R R A D L D +CA + + R K +++ E + L Sbjct: 371 LDSALVSAAQLAKRYLPYRRLPDSAID--LVDISCAG--VAVARDSKPEELDNKERELHL 426 Query: 387 KQAEADMFQL--KADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYL 442 Q E + + D +E +Y + S + R ++ L Sbjct: 427 LQVEIKALERDEETDPTTKERLQQARQKEASLIEELEPMRQRYQQEVDSHEQLRQAKKKL 486 Query: 443 FEELKAQENSQCDFDPMKM--RMESEIRGLLKGME 475 E +++ +D I + K +E Sbjct: 487 DELENKCMDAERRYDNATAADLKYFAIPDIKKRIE 521 >gi|68551190|ref|ZP_00590613.1| AAA ATPase, central region:Clp, N terminal [Pelodictyon phaeoclathratiforme BU-1] Length = 441 Score = 160 bits (405), Expect = 8e-38 Identities = 25/197 (12%), Positives = 58/197 (29%), Gaps = 16/197 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + Sbjct: 251 GAKFRGEFEERLKAVVREVQSAEGEVILFIDELHLLVGAGSAEGSMDAANILKPALARGE 310 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ D PS+E+ ++ EI V+ Sbjct: 311 LRCIGATTLDEYRKHIEKDAALERRFQTVVVDQPSVEDT--VSILRGLKEKYEIHHGVRI 368 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + AE R A D L D A + L++E +++ + +R Sbjct: 369 KDAAIVAAAELSNRYIADRFLPDKAID--LID--EASSRLRLEIDSSPEELDRINREIRR 424 Query: 387 KQAEADMFQLKADEARR 403 + E + + + + + Sbjct: 425 LEIEREALRREIEAGGQ 441 >gi|1673983|gb|AAB95959.1| ATP-dependent protease binding subunit ClpB [Mycoplasma pneumoniae M129] Length = 715 Score = 160 bits (405), Expect = 9e-38 Identities = 36/280 (12%), Positives = 84/280 (30%), Gaps = 28/280 (10%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGS--EDARGKKLFWKADELIEK 273 T F K V + +I +D + +I + + ++ + Sbjct: 102 GTQYQGEFEKRVNGILKQVKESNGKIILFIDEIHQIVGLGRNSSSGAMDIANILKPMLAR 161 Query: 274 LKSKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + K+I + + FQ+ PS E ++ E+ + Sbjct: 162 GEIKVIGATTLKEYREYVEKDGALERRFQKILVSEPS--QQEALTIMRGLKTRWELFHNL 219 Query: 325 QDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV 384 + E R A D L D+A A +K E + I+ L+ + Sbjct: 220 TIFDSALVAAVEMSARYIPDRNLPDKAID--LIDEASAK--IKTEMASEPVVIDTLKREI 275 Query: 385 RLKQAEADMFQLKADEA----RREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEA 435 + E + + A ++ T+++ K + +++ Sbjct: 276 INLETEYAALKQDKENADNKKKQGHLDNLKQQLDELKKKRDSLTAEWKKEKTNFESINKL 335 Query: 436 EERRQYLFEELKAQENSQCDFDPMKMRMESEIRGLLKGME 475 ++ + L L+ + ++ + +I L +E Sbjct: 336 KKEIEDLQTRLELYQTEGN-YEAASKILYYDIPKLKNQLE 374 >gi|28572245|ref|NP_789025.1| putative Clp-family ATP-binding protease/regulator [Tropheryma whipplei TW08/27] Length = 840 Score = 160 bits (404), Expect = 9e-38 Identities = 31/267 (11%), Positives = 73/267 (27%), Gaps = 46/267 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + L+ + + Sbjct: 258 GSRYRGDFEERLKKVTKEIRSRGDIIVFIDEIHSLVGAGSAEGAIDAATILKPLLARGEL 317 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + + FQ + PS+ ++ E V+ T Sbjct: 318 QTIGATTLDEYRKNIEKDSALERRFQPVNVSEPSIPMCI--QILKGLRDRYEAHHKVKIT 375 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + R A D L D+A A L++ Q+ +E + Sbjct: 376 DEAIYAAVTLSSRYINDRFLPDKAID--LIDEAGA--RLRLSVLSNPSQLRAVEKKIL-- 429 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + D+A + + ++ E + + + L EL+ Sbjct: 430 -----AVVARKDKAVEKQDFD----------------------KVGELKRKEKALRAELR 462 Query: 448 AQENSQCDFDPMKM--RMESEIRGLLK 472 + + + E I +L Sbjct: 463 KIKRDYENGNIASAGTVDEGLIAEVLA 489 >gi|51894268|ref|YP_076959.1| class III stress response-related ATPase [Symbiobacterium thermophilum IAM 14863] Length = 833 Score = 160 bits (404), Expect = 1e-37 Identities = 29/233 (12%), Positives = 68/233 (29%), Gaps = 29/233 (12%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + + +I +D + I + + + Sbjct: 258 GSKYRGEFEERLKKVLEEIRNAGNVILFIDELHTIIGAGAAEGAIDASNILKPALARGEL 317 Query: 277 KLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I + + FQ + PS E+ ++ E V+ T Sbjct: 318 QAIGATTIDEYRKYVEKDAALERRFQPVMVEEPSPED--AIQILKGLRDRYEAHHRVEIT 375 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR-- 385 +E R A D L D A + +++ P ++ELE + Sbjct: 376 DAAIEAAVRLSDRYVTDRFLPDKAVD--LID--EAASRVRLSTFVAPPNLKELEDKLEEV 431 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER 438 K+ EA + + ++A R + + + + +++ Sbjct: 432 RKEKEAAVQGQEFEKAARLRD------------KETKLKEELERQKNEWQQKK 472 >gi|22294028|dbj|BAC07860.1| ATP-dependent Clp protease regulatory subunit [Thermosynechococcus elongatus BP-1] Length = 824 Score = 159 bits (403), Expect = 1e-37 Identities = 32/242 (13%), Positives = 72/242 (29%), Gaps = 37/242 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 249 GTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 308 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+E ++ E ++ + Sbjct: 309 QCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETI--EILYGLRERYEKHHKLKIS 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E A+ R A D L D A + +++ + P +EL+ +R Sbjct: 367 DEALEAAAKLSDRYISDRYLPDKAID--LID--EAGSRVRLINSQLPPAAKELDRELRQ- 421 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + D+A R + L+ R E + + + + ++ K Sbjct: 422 ------VLKEKDDAVRAQ---------------NFDKAGELRDREMELKAQIRAIAQQKK 460 Query: 448 AQ 449 A+ Sbjct: 461 AE 462 >gi|52001792|gb|AAU21734.1| class III stress response-related ATPase [Bacillus licheniformis ATCC 14580] Length = 810 Score = 159 bits (403), Expect = 1e-37 Identities = 40/255 (15%), Positives = 75/255 (29%), Gaps = 34/255 (13%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 250 GTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGEL 309 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D PS E ++ E V T Sbjct: 310 QCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSPEESI--QILKGLRDRYEAHHRVSIT 367 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D L D A + +++ P ++ELE + Sbjct: 368 DEAIEAAVKLSDRYISDRFLPDKAID--LID--EAGSKVRLRSFTTPPNLKELEQKL--- 420 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 D + + D A + E + + RL E E + ++E + Sbjct: 421 ----DEVRKEKDAAVQSQEFEKAASL------------RDTEQRLREQVEETKKTWKEKQ 464 Query: 448 AQENSQCDFDPMKMR 462 QENS+ D + M Sbjct: 465 GQENSEVTVDDIAMV 479 >gi|71675077|ref|ZP_00672823.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Trichodesmium erythraeum IMS101] Length = 825 Score = 159 bits (402), Expect = 2e-37 Identities = 36/265 (13%), Positives = 76/265 (28%), Gaps = 40/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 249 GTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 308 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS++ ++ E ++ Sbjct: 309 QCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDETI--EILYGLRERYEQHHKLKIL 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E A+ R A D L D A + +++ + P +EL+ Sbjct: 367 DTALEAAAKLSDRYISDRYLPDKAID--LID--EAGSRVRLINSQLPPAAKELDK----- 417 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 E + DEA R + + L+ R E + + L + K Sbjct: 418 --ELRSILKEKDEAVRSQDFD---------------KAGELRDREMEIKSEIRSLAQNKK 460 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 ++ D M E +I ++ Sbjct: 461 LDSTNE---DDSPMVTEEDIAHIVA 482 >gi|56418613|ref|YP_145931.1| ATP-dependent Clp protease ATPase subunit [Geobacillus kaustophilus HTA426] Length = 810 Score = 159 bits (402), Expect = 2e-37 Identities = 30/267 (11%), Positives = 71/267 (26%), Gaps = 23/267 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 250 GTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPALARGEL 309 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D P++E E ++ E V + Sbjct: 310 QCIGATTLDEYRKYIEKDAALERRFQPIYVDEPTVE--ESIQILKGLRDRYEAHHRVSIS 367 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + + R A D L D+AC + +++ P+++ELE + Sbjct: 368 DEAIVQAVKLSDRYITDRFLPDKAID--LIDEAC--SKVRLRSFTAPPKLKELEQKLEEV 423 Query: 388 QAEADMF--QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 + E D + ++A + T + K + + Sbjct: 424 RKEKDAAVQSQEFEKAASLRD------MEQRLREELEETKRAWKEKQGQENLEVTVEDIA 477 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLK 472 + + + L + Sbjct: 478 AVVSSWTGIPVSKLAETETERLLKLEE 504 >gi|23097548|ref|NP_691014.1| ATP-dependent Clp protease [Oceanobacillus iheyensis HTE831] Length = 809 Score = 158 bits (401), Expect = 2e-37 Identities = 38/265 (14%), Positives = 71/265 (26%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 253 GTKYRGEFEDRLKKVMEEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGEL 312 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D P+LE ++ E V T Sbjct: 313 QCIGATTLDEYRKYIEKDAALERRFQPIQVDEPTLEETI--QILNGLRDRYEAHHRVTIT 370 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E A R A D L D A + +++ P ++ELE + Sbjct: 371 DEAIEAAASLSDRYITDRFLPDKAID--LID--EAGSKVRLRSYTVPPNLKELEQKL--- 423 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 D + + D A + E K LR SE R + E Sbjct: 424 ----DEVRKEKDAAVQSQEF-----------------EKAASLRDSEQRFREEL---ETT 459 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 + + +I ++ Sbjct: 460 KNQWKEKQGQTDSEVTMEDIAAVVS 484 >gi|67677719|ref|ZP_00474444.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chromohalobacter salexigens DSM 3043] Length = 889 Score = 158 bits (401), Expect = 2e-37 Identities = 32/262 (12%), Positives = 63/262 (24%), Gaps = 17/262 (6%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI-- 279 F + +I +D + A + + + + I Sbjct: 288 EFENRLKNVIEETRRSLHPIILFIDEAHTLIGSGGQAGQGDAANLLKPALARGELRTIAA 347 Query: 280 -------DPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + FQ + P+ ++ + + V + Sbjct: 348 TTWAEFKKYFEKDAALARRFQVVKVEEPA--EPVAINMLRGLNERMQDHHKVTILDDAIV 405 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A A + + + + +E+ V +E Sbjct: 406 QAVRLSHRYITGRQLPDKAVSV----LDTACARVALAQSSQPAALEDAYRRVDNLNSEIA 461 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENS 452 + Q + E AE + R E R + L E +A E Sbjct: 462 VLQREQREGSDHAETLAALDEQLTATQGEIDDLRARWEREQEIVTRLKALEAEREAIEAG 521 Query: 453 QCDFD-PMKMRMESEIRGLLKG 473 Q D R E+R L Sbjct: 522 QQSGDVDALSRQIGEVRRELAE 543 >gi|67985140|gb|EAM73105.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Kineococcus radiotolerans SRS30216] Length = 840 Score = 158 bits (401), Expect = 3e-37 Identities = 30/265 (11%), Positives = 68/265 (25%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + ++ +D + + ++ + + Sbjct: 257 GSRYRGDFEERLKKVLKEIRTRGDIVLFIDEIHTLVGAGAAEGAIDAASILKPMLARGEL 316 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + + ++ + FQ PSL + ++ E V T Sbjct: 317 QTVGATTLDEFKKYIEKDPALERRFQPIQVPEPSLPH--AIEILKGLRDRYEAHHRVTIT 374 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D+A A L++ R P + E + + Sbjct: 375 DGALVAAATMADRYINDRYLPDKAID--LIDEAGA--RLRIRRMTAPPDLREFDERIAD- 429 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + + A + L + E+ + Sbjct: 430 ------VRREKESAIDAQDF-------------------EKAASLRDKEKTVTAQRATRE 464 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 + S D + E I +L Sbjct: 465 KEWRSG-GLDIVAEVDEELIAEVLA 488 >gi|33640781|emb|CAE21236.1| ClpC [Prochlorococcus marinus str. MIT 9313] Length = 859 Score = 158 bits (400), Expect = 3e-37 Identities = 33/259 (12%), Positives = 71/259 (27%), Gaps = 44/259 (16%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 251 GTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 310 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+ ++ E ++ T Sbjct: 311 QCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIAETI--EILQGLRERYEQHHRLKIT 368 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ A R A D L D A + +++ K P +E++ Sbjct: 369 DEALDAAANLGDRYISDRFLPDKAID--LID--EAGSRVRLLNSKLPPAAKEVDK----- 419 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 E Q + ++A R+ + + E E+ L E+++ Sbjct: 420 --ELRKVQKEKEDAVRDQDF----------------------AKAGELREKEVELREKIR 455 Query: 448 AQENSQCDFDPMKMRMESE 466 S E+E Sbjct: 456 TLLQSSRQGSEESPPAEAE 474 >gi|33861644|ref|NP_893205.1| ClpC [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 842 Score = 158 bits (400), Expect = 3e-37 Identities = 31/241 (12%), Positives = 69/241 (28%), Gaps = 37/241 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 251 GTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 310 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+ + ++ E ++ T Sbjct: 311 QCIGATTLDEYRKHIERDAALERRFQPVMVGEPSIADTI--EILKGLRERYEQHHRLKIT 368 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E A R A D L D A + +++ K P+ ++++ Sbjct: 369 DNALEAAAHLGDRYISDRFLPDKAID--LID--EAGSRVRLINSKLPPEAKQIDK----- 419 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 E Q + +E+ R+ + L+ + E + + L E K Sbjct: 420 --ELRQVQKQKEESVRDQ---------------NFDQAGVLREKEIELSAKIKELLENKK 462 Query: 448 A 448 Sbjct: 463 E 463 >gi|39982304|gb|AAR33765.1| clpB protein, putative [Geobacter sulfurreducens PCA] Length = 875 Score = 158 bits (400), Expect = 3e-37 Identities = 32/262 (12%), Positives = 67/262 (25%), Gaps = 20/262 (7%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + +I +D + A G + + + Sbjct: 272 EFESRLKSVIEEVKGASRPVILFIDEAHTLIGAGNQAGGGDAANLLKPALARGELRTIAA 331 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ D PS+E ++ E A V + Sbjct: 332 TTWSEYKKYFEKDAALARRFQPVKLDEPSVE--TAVLILRGLKDTYEAAHGVTIRDDAVR 389 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R + A D A +K+ K ++EE E ++ + E Sbjct: 390 AAAELSSRYLSGRQLPDKAVD----LLDTAAARVKLLLTGKPGRVEEAERRIQALEREEA 445 Query: 393 MFQLKADEARRE---AEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ 449 + + R E T+++ + R A E + + Sbjct: 446 ALRRDRLQGRPEDEGRLAVLKEELALLREELAAVTARWHRER-ELAGAVVALRNEAAEGR 504 Query: 450 ENSQCDFDPMKMRMESEIRGLL 471 + +++ + Sbjct: 505 DAGGDAVGLKMAEPAAKLAEVQ 526 >gi|31544696|ref|NP_853274.1| Clp [Mycoplasma gallisepticum R] Length = 717 Score = 158 bits (399), Expect = 3e-37 Identities = 34/311 (10%), Positives = 89/311 (28%), Gaps = 29/311 (9%) Query: 187 AIREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFG-FVKDVFQHCAPNW-DFEALIKE 244 I G + + + ++ G F + + + +I Sbjct: 70 EGFARKIVNGDVPDNLKDVEVVELSLSSLIAGTQFQGSFEERLNKILKEVKNSSGKVILF 129 Query: 245 LDFVRKIFRGSE--DARGKKLFWKADELIEKLKSKLIDP---------LDACNFILMFFQ 293 +D + ++ + ++ + + K+I ++ + Q Sbjct: 130 IDEIHQLVGMGKNSSNSAMDAANILKPMMARGEIKVIGATTIDEYRKYIEKDGALERRMQ 189 Query: 294 ECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACD 353 + D P+ + E ++ E V+ + E R A D Sbjct: 190 KILVDEPTKQ--EALTIMRGLRERWEAFHKVRIFDDALVAAVEMSARYISDRYLPDKAID 247 Query: 354 RELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQLKADE----ARREAEXXX 409 L D A +K P+++ ++ + E + + E R Sbjct: 248 --LID--EAAAKIKTLIHSLPPELDNIKQKIIHLSTELAALEREKKENHSNVRLGRIEQL 303 Query: 410 XXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEELKAQENSQCDFDPMKMRME 464 T K+ + + +++ +E L E++ + ++ ++ + Sbjct: 304 KKEIKDFTNKQNELTVKWTQQKTIYECINKLKEEVTNLTAEIERLQ-AKGEYTQASKLLY 362 Query: 465 SEIRGLLKGME 475 EI + +E Sbjct: 363 LEIPKRQEEIE 373 >gi|56419503|ref|YP_146821.1| ATP-dependent Clp protease [Geobacillus kaustophilus HTA426] Length = 645 Score = 158 bits (399), Expect = 4e-37 Identities = 29/275 (10%), Positives = 78/275 (28%), Gaps = 53/275 (19%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + + A + + +I +D + + + + + +++ Sbjct: 178 RGQFEERMKRLIAELQERKNIILFIDEIHLLVGAGAAEGSMDAGNILKPALARGELQVVG 237 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P++E ++ E V+ T +E Sbjct: 238 ATTLKEYRQIEKDAALERRFQPVIVHEPTVEEAIA--ILKGIQPKYEQFHHVRYTDEAIE 295 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A D L D+A + +L++ ++L+ + E + Sbjct: 296 ACVKLSHRYIQDRFLPDKAID--LLDEAGSKANLRLG----PTDEKQLQERLIQIAKEKE 349 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL---------- 442 + + KLR E + +Q Sbjct: 350 QAAKEEN------------------------YELAAKLRAEELKLEKQLEQGVTQERPTV 385 Query: 443 ---FEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 E E + ++ + +++ L + + Sbjct: 386 DVADIEQIIAEKTGIPVGKLQADEKEKMKHLEENL 420 >gi|50288205|ref|XP_446531.1| unnamed protein product [Candida glabrata] Length = 908 Score = 157 bits (398), Expect = 4e-37 Identities = 36/271 (13%), Positives = 81/271 (29%), Gaps = 18/271 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALI-KELDFVRKIFRGSEDARGKKL-----FWKADEL 270 F + + + + LI +D + + +D L + Sbjct: 254 GAKYKGDFEERLKGVLKEVEESKTLIVLFIDEIHMLMGNGKDDAANILKPALSRGHLKVI 313 Query: 271 IEKLKSKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ ++ FQ+ D P++ ++ EI V+ Sbjct: 314 GATTNNEYRSIVEKDGAFERRFQKIDVQEPTIRQTVA--ILRGLQPKYEIHHGVRILDSA 371 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + ++ R R A D L D +CA + + R K +++ E ++L Q E Sbjct: 372 LVTASQLAKRYLPYRRLPDSAID--LVDISCAG--VAVARDSKPEELDSKERQLQLLQVE 427 Query: 391 ADMFQLKADE--ARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFEEL 446 + D ++ +Y + R E + ++ L E Sbjct: 428 IKALERDKDADCTTKDRLKQAKKREASLIEELEPLRQRYNEERKGHEELTKLKKKLDELE 487 Query: 447 KAQENSQCDFDPMKM--RMESEIRGLLKGME 475 +++ +D I + K ++ Sbjct: 488 NKALDAERRYDTATAADLRYFAIPDIKKKID 518 >gi|67874974|ref|ZP_00504525.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Clostridium thermocellum ATCC 27405] Length = 818 Score = 157 bits (397), Expect = 6e-37 Identities = 30/248 (12%), Positives = 67/248 (27%), Gaps = 41/248 (16%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + + +I +D + I + + + Sbjct: 251 GAKYRGEFEERLKKALDEIRRAGNVILFIDEMHTIIGAGAAEGAIDASNILKPSLARGEI 310 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 ++I ++ + FQ P+ E E ++ E V+ T Sbjct: 311 QVIGATTIDEYRKHIEKDAALERRFQPILVGEPTKE--EAIEILRGLRDKYEAHHSVKIT 368 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + R A D L D A + ++++ P ++ LE V Sbjct: 369 DEALVAAVNMSDRYITDRFLPDKAID--LID--EAASRVRLKSFTAPPDLKHLEEKV--- 421 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + + ++A E R+ + E+R + E+ K Sbjct: 422 ----ERLRKEKEDAIVCQEF-------------------EKAARIRDEEQRLKNELEKAK 458 Query: 448 AQENSQCD 455 + Sbjct: 459 DSWRQKNQ 466 >gi|68056364|ref|ZP_00540488.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Exiguobacterium sp. 255-15] Length = 815 Score = 156 bits (396), Expect = 9e-37 Identities = 31/265 (11%), Positives = 74/265 (27%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 250 GTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGEL 309 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+ + E ++ E V T Sbjct: 310 QCIGATTLDEYRKYIEKDAALERRFQPIQVAEPTTD--EATQILFGLRDRYEAHHRVTIT 367 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ R A D L D A + +++ P ++E+E+ + Sbjct: 368 DEAIQEAVTLSDRYISDRFLPDKAID--LID--EAASKVRLRSYTAPPNLKEVEAKL--- 420 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + DEA + E L + E++ + E LK Sbjct: 421 ----EGIRKDKDEAVQSQEF-------------------EKAASLRDTEQKLRDELERLK 457 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 + ++ + + +I ++ Sbjct: 458 EEWQNKQ-GNEKLEVTKDDIAQVVA 481 >gi|33240557|ref|NP_875499.1| ATPase with chaperone activity ATP-binding subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 856 Score = 156 bits (396), Expect = 9e-37 Identities = 27/199 (13%), Positives = 60/199 (30%), Gaps = 22/199 (11%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 251 GTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 310 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+E+ ++ E ++ T Sbjct: 311 QCIGATTLDEYRKHIERDAALERRFQPVMIGEPSIEDTI--EILKGLRERYEQHHRLKIT 368 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + +++ K P+ ++++ Sbjct: 369 DEALNAAANLGDRYISDRFLPDKAID--LID--EAGSRVRLLNSKLPPEAKQVDK----- 419 Query: 388 QAEADMFQLKADEARREAE 406 E Q + +EA R+ + Sbjct: 420 --ELRKVQKEKEEAVRDQD 436 >gi|72382499|ref|YP_291854.1| ATPase [Prochlorococcus marinus str. NATL2A] Length = 855 Score = 156 bits (395), Expect = 1e-36 Identities = 30/241 (12%), Positives = 71/241 (29%), Gaps = 37/241 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 251 GTKYRGEFEERLKKIMEEIKSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 310 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+++ ++ E ++ T Sbjct: 311 QCIGATTLDEYRKHIERDAALERRFQPVMIGEPSIKDTI--EILKGLRERYEQHHRLKIT 368 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ A R A D L D A + +++ K P+ +E++ Sbjct: 369 DEALDAAANLGDRYISDRFLPDKAID--LID--EAGSRVRLLNSKLPPEAKEVDK----- 419 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 E Q +EA R+ + L+ + E ++ + L + ++ Sbjct: 420 --ELRKIQKSKEEAVRDQNFT---------------QAGELREKEVELRDKIRNLLQNIR 462 Query: 448 A 448 Sbjct: 463 Q 463 >gi|71677561|ref|ZP_00675297.1| AAA ATPase, central region:Clp, N terminal [Trichodesmium erythraeum IMS101] Length = 905 Score = 156 bits (395), Expect = 1e-36 Identities = 35/290 (12%), Positives = 78/290 (26%), Gaps = 36/290 (12%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGK---KLFWKADELIE 272 F + + ++ +D + + ++ Sbjct: 266 GAKFRGEFEERLRSVLREVTHSDGQIVLFIDELHTVVGAGSGGGNSSGVDAGNLLKPMLA 325 Query: 273 KLKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEV 323 + + + I ++ + FQ+ + PS+E+ ++ E Sbjct: 326 RGELRCIGATTIDEYRKHIEKDAALERRFQKVEVGQPSVEDTI--SILRGLKDRYETHHG 383 Query: 324 VQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESI 383 V+ T + A R A D L D A LKME K ++E ++ Sbjct: 384 VKITDAALVAAATLSNRYISDRFLPDKAID--LVD--EAAAQLKMEITSKPVELEAIDRR 439 Query: 384 VRLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTS-KYLKLRLSEA------E 436 + + E + + +E LK + + E Sbjct: 440 IMQLEMEKLSIEGELSGTNKEKNSEAILSTKVSPALERITNEINSLKQKQEKFSSQWSGE 499 Query: 437 ERRQYLFEELKAQ--------ENSQCDFDP--MKMRMESEIRGLLKGMEM 476 + LKA+ E ++ +D ++ + + E Sbjct: 500 KELLNSINSLKAEEDKIKVQIEQAERAYDLNTAAQLKYGQLETVHRDREA 549 >gi|46400786|emb|CAF24235.1| probable endopeptidase ATP-binding chain clpC [Parachlamydia sp. UWE25] Length = 847 Score = 155 bits (393), Expect = 2e-36 Identities = 37/279 (13%), Positives = 83/279 (29%), Gaps = 42/279 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + ++ +D + I + + + Sbjct: 275 GTKYRGQFEERIKAVMDEIKKNGNVLLFIDELHTIVGAGAAEGAIDASNILKPALSRGEL 334 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ PS+++ ++ E V T Sbjct: 335 QCIGATTIDEYRKHIEKDAALERRFQKILVAPPSVDDTI--EILYGLKPEYEKHHKVIFT 392 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR-- 385 + + A R A D L D+A A L++ + I + ES + Sbjct: 393 NQAIRAAAVLSDRYIHGRFLPDKAID--LIDEAGAK--LRISMMNQPQDISKYESEIEAT 448 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 E + + + ++A + + K L+ +L + + EE Sbjct: 449 RLAKEESIGKQEYEKAAKLRD-----------------KEKTLREQLQQIRAEWEINKEE 491 Query: 446 LKAQEN--------SQCDFDPMKMRMESEIRGLLKGMEM 476 + ++ P+ E E++ +LK E+ Sbjct: 492 HEVIVEDEDVANVIARQTGIPLNRLTEGELQKVLKMEEI 530 >gi|10172715|dbj|BAB03822.1| class III stress response-related ATPase [Bacillus halodurans C-125] Length = 813 Score = 155 bits (392), Expect = 2e-36 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 252 GTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGEL 311 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ + PSL+ E ++ E V T Sbjct: 312 QCIGATTLDEYRKYIEKDAALERRFQPIQVNEPSLD--ESIQILKGLRDRYEAHHRVTIT 369 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R + A D L D A + +++ P ++ELE + Sbjct: 370 DEAIEEAVKLSDRYIQDRFLPDKAID--LID--EAASKVRLRSYTAPPNLKELEQKL--- 422 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + + D A + E L ++E+R + +++K Sbjct: 423 ----EETRKEKDAAVQSQEF-------------------EKAASLRDSEQRIREELDQMK 459 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 Q + +I ++ Sbjct: 460 NDWK-QKQGQENTQVVVDDIAQVVA 483 >gi|23126880|ref|ZP_00108763.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Nostoc punctiforme PCC 73102] Length = 836 Score = 155 bits (392), Expect = 3e-36 Identities = 26/192 (13%), Positives = 52/192 (27%), Gaps = 16/192 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + G + + + Sbjct: 269 GTRFRGDFEERIKKVVEEVRTVGNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGEL 328 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+E ++ E V Sbjct: 329 QCIGATTLDEYRKHIERDAALERRFQPIMVGEPSVEET--VQILYGLRGAYEQHHKVTIL 386 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + AE R A D L D+A + L+ + +EL+ + Sbjct: 387 DSALVAAAELSDRYISDRFLPDKAID--LIDEAGSRVRLRNSQSS---PNKELKRELAGV 441 Query: 388 QAEADMFQLKAD 399 E + D Sbjct: 442 TKEKEAAVRVQD 453 >gi|62515994|ref|ZP_00387365.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 688 Score = 155 bits (392), Expect = 3e-36 Identities = 36/270 (13%), Positives = 91/270 (33%), Gaps = 38/270 (14%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + Q +I +D + +I G + + + +L+ Sbjct: 140 RGQFEQRMQQLVKELQSQPDIILFIDEIHEIVGVGNSEGGMDAGNIIKPALARGELQLVG 199 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + + FQ + PS++ ++ E V+ T +E Sbjct: 200 ATTIKEFREIEKDSALARRFQPVEVKEPSIDETI--KILKGIQKRYEDYHHVKYTDNAIE 257 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A D L D+A + +L + K+ E +++ +LKQ D Sbjct: 258 AAVKLSARYIQDRFLPDKAID--LLDEAGSRMNLTIPYIDKEKIQERIDAAEKLKQ---D 312 Query: 393 MFQLK-ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-----QYLFEEL 446 + + ++A + KY KL+ + + + +++ Sbjct: 313 ALKNEDYEKAAYYRD----------------QIEKYEKLKDQNVDPDKAPTITAKVMDKI 356 Query: 447 KAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 ++ + D ++ + E ++ L ++ Sbjct: 357 VEEKTNIPVGD-IQAQEEKQLANLASDLKA 385 >gi|62423737|ref|ZP_00378894.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Brevibacterium linens BL2] Length = 850 Score = 155 bits (391), Expect = 3e-36 Identities = 36/265 (13%), Positives = 72/265 (27%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + ++ + + Sbjct: 254 GSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGEL 313 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PSL + ++ E V T Sbjct: 314 QTIGATTLDEYRKHIEKDAALERRFQPIQVPEPSLAHSI--EILKGLRDKYEAHHKVTIT 371 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + R A D L D+A A L++ R +I +LE + Sbjct: 372 EGALSAAVNMSDRYVNDRYLPDKAID--LIDEAGAK--LRISRLSVPQEIRDLEEKIL-- 425 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + +A ++ E R SE + + Q E+ + Sbjct: 426 ---EARHRKEAAIDAQDFEL-------------------AASERDSEMKLQ-QDKDEQTE 462 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 A S D + I +L Sbjct: 463 AWRKSGK--DTSAVVDAELIAEVLA 485 >gi|29606248|dbj|BAC70311.1| putative ATP-dependent Clp protease [Streptomyces avermitilis MA-4680] Length = 842 Score = 155 bits (391), Expect = 3e-36 Identities = 29/265 (10%), Positives = 68/265 (25%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + ++ + + Sbjct: 255 GSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGEL 314 Query: 277 KLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I + + FQ PSL + ++ E V T Sbjct: 315 QTIGATTLDEYKKYLEKDAALERRFQPIQVAEPSLPHTI--EILKGLRDRYEAHHRVSIT 372 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + +++ R P + E + + Sbjct: 373 DEALVQAATLADRYVSDRFLPDKAID--LID--EAGSRMRIRRMTAPPDLREFDEKIAGV 428 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 ++ ++ E L + E++ + + Sbjct: 429 -----RHDKESAIDSQDFE---------------------KAASLRDKEKQLLAAKAKRE 462 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 + + D D + I +L Sbjct: 463 KEWKTG-DMDVVAEVDGELIAEVLA 486 >gi|28212201|ref|NP_783145.1| negative regulator of genetic competence mecB/clpC [Clostridium tetani E88] Length = 811 Score = 155 bits (391), Expect = 4e-36 Identities = 36/266 (13%), Positives = 76/266 (28%), Gaps = 42/266 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + +I +D + I + + + Sbjct: 253 GAKYRGEFEDRLKKVMEEIRKSGNVILFIDEIHTIIGAGAAEGAIDASNILKPALARGEI 312 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + + FQ P+ E E ++ E T Sbjct: 313 QCIGATTIDEYRKHIEKDSALERRFQPITVGEPTKE--EAILILRGLRDKYEAHHRANIT 370 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E R + A D L D A + +++E ++ELE + Sbjct: 371 DEAIEAAVNLSDRYITERYLPDKAID--LMD--EAASKVRIENMIAPTDMKELEENL--- 423 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + ++A R + K +LR E+ +Y E LK Sbjct: 424 ----EKVTKEKEDAIRVQDF-----------------EKAAQLRDH--EKDLKYRLENLK 460 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKG 473 + +Q + E++I ++ Sbjct: 461 SDWKTQKQVATLT-VDETQIAAVVSK 485 >gi|6466400|gb|AAF12982.1| unknown; Clp protease ATP binding subunit [Cyanidium caldarium] Length = 854 Score = 154 bits (390), Expect = 4e-36 Identities = 29/234 (12%), Positives = 66/234 (28%), Gaps = 26/234 (11%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + +I +D V + + + + Sbjct: 280 GTKYRGEFEERLKKIMDEIRMADNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 339 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ + P++E ++ E ++ + Sbjct: 340 QCIGATTLEEYRKHIEKDAALERRFQPVMVEEPTVEETI--EILRGLRDRYEAHHRLKIS 397 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ + A D L D A + +++ K P E L+ +R Sbjct: 398 DSAIVAAAKLSDQYIADRFLPDKAID--LVD--EASSRVRLMNYKLPPSAEYLDEELRHI 453 Query: 388 QAEADMFQL--KADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR 439 Q + +EA + E + +K + EE Sbjct: 454 QKIKNELIRSGDFEEASQFRE---------REIEVKVQMAALMKAKKEAIEEEL 498 >gi|15026259|gb|AAK81126.1| ATPases with chaperone activity clpC, two ATP-binding domain [Clostridium acetobutylicum ATCC 824] Length = 813 Score = 154 bits (389), Expect = 6e-36 Identities = 32/250 (12%), Positives = 71/250 (28%), Gaps = 41/250 (16%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + + +I +D + I + + + Sbjct: 254 GSKYRGEFEERLKKVMTEIKAAKNVILFIDEIHTIVGAGGAEGAIDASNILKPSLARGEI 313 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D PS E E ++ E V+ T Sbjct: 314 QCIGATTTEEYRRYIEKDAALERRFQPVDVGEPSKE--EAVQILEGLRDKYEAHHGVKIT 371 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E R + A D L D A ++++ P ++ + Sbjct: 372 DDAIEAAVNLSTRYIQDRFLPDKAID--LID--EAAAKVRIQNLTAPPDLKN-------Q 420 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + E + + +A R + +L + E++ + EE K Sbjct: 421 EEELEKTTREKSDAIRLQDF-------------------EKAAKLRDKEKKLRIAIEEFK 461 Query: 448 AQENSQCDFD 457 + D + Sbjct: 462 KNWKNTSDNE 471 >AAA_CLPB_204-398_PF00004.17 Length = 195 Score = 153 bits (388), Expect = 7e-36 Identities = 17/147 (11%), Positives = 40/147 (27%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLKEVTDSRGNIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 108 LRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTI--SILRGLKERYEVHHGVKI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 SDSALVAAATLSTRYISDRFLPSKAID 192 >AAA_Q5NML2_204-398_PF00004.17 Length = 195 Score = 153 bits (388), Expect = 7e-36 Identities = 15/147 (10%), Positives = 34/147 (23%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKGVLDEVKQSDGQIILFIDEMHTLIGAGKSDGAMDAGNLLKPALARGE 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ P++E+ ++ E V+ Sbjct: 108 LHCIGATTLAEYQKYVEKDPALQRRFQPVYVGEPTVEDTI--SILRGLKEKYEAHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R A D Sbjct: 166 TDAALVSAATLSNRYITNRFLPDKAID 192 >gi|73749097|ref|YP_308336.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Dehalococcoides sp. CBDB1] Length = 812 Score = 153 bits (388), Expect = 7e-36 Identities = 28/253 (11%), Positives = 73/253 (28%), Gaps = 37/253 (14%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 + F + + +I +D + + + + + Sbjct: 249 GSKFRGEFEERLKAVMDEVRQSAGEIILFIDEIHTVVGAGAAEGAIDASNMLKPALSRGE 308 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ + P++E ++ E ++ Sbjct: 309 LQTIGATTLDDYRKYIEKDTALERRFQPVYVEEPTVEQTI--EILKGIRPKYETHHKLKI 366 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + +E R + + A D L D A + L+++ + P++++LE+ R Sbjct: 367 SDAALEAAVRLSSRYITERQLPDKAID--LID--EAASKLRLDSESAPPEVKKLENEFRQ 422 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEEL 446 E + D ++ ++ E+ E L Sbjct: 423 AGIEEEAASQLQD---------------------YEKAAELKAEKIRLEEKFNTAREEWL 461 Query: 447 KAQENSQCDFDPM 459 K ++ ++ D Sbjct: 462 KQEKIAEEVTDKQ 474 >gi|68209073|ref|ZP_00561139.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Desulfitobacterium hafniense DCB-2] Length = 826 Score = 153 bits (388), Expect = 8e-36 Identities = 23/201 (11%), Positives = 59/201 (29%), Gaps = 17/201 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + + + + Sbjct: 258 GSKYRGEFEERLKKVMEEIRVDGRIIVFIDELHTLIGAGAAEGAIDAANILKPALARGEL 317 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P++E ++ E Q T Sbjct: 318 QCIGATTLDEYRKYIEKDPALERRFQPITVGEPTVEQ--AVQILLGLRDRYEAHHRTQIT 375 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D L D A + +++ P ++ LE + Sbjct: 376 DEAVEAAVKMSDRYISDRFLPDKAID--LMD--EAASRVRLAAFTAPPDLKSLEEKIEAL 431 Query: 388 QAEADM--FQLKADEARREAE 406 ++E + + ++A + + Sbjct: 432 KSEKEAAVLGQEFEKAAKFRD 452 >gi|71675746|ref|ZP_00673490.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Trichodesmium erythraeum IMS101] Length = 825 Score = 153 bits (388), Expect = 8e-36 Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 17/201 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 250 GTRFRGEFEERLKKIMDEIRANGNIILVIDEIHTVVGAGAIEGSMDAANILKPALARGEL 309 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+E ++ + E + + Sbjct: 310 QCIGATTLDEYRKHIERDAALERRFQPVKVGEPSVEQTI--EILYGVRSAYEQHHRLTIS 367 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL- 386 + A+ R A D L D+A + +K PQ+ EL + Sbjct: 368 DEALRAAAQLSDRYISDRFLPDKAID--LIDEAGSRVRVKNSMVS--PQLRELRRELSRV 423 Query: 387 -KQAEADMFQLKADEARREAE 406 K E + Q ++A + + Sbjct: 424 IKDKEETVRQQDFEKASQLRD 444 >gi|62512777|ref|ZP_00384381.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Lactobacillus casei ATCC 334] Length = 724 Score = 153 bits (387), Expect = 9e-36 Identities = 30/265 (11%), Positives = 77/265 (29%), Gaps = 28/265 (10%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + Q + +I +D + +I G + + + +L+ Sbjct: 177 RGQFEQRMQQLIDELKKNKNIILFIDEIHEIVGAGNAEGGMDAGNVLKPALARGELQLVG 236 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + + Q + P++E ++ + V+ T +E Sbjct: 237 ATTSNEYRQIEKDSALARRLQPVLVEEPTVEETI--KILKGLQPRYQDFHHVKYTDAAIE 294 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R + A D L D++ + +L + + +++ + KQA Sbjct: 295 AAATLSNRYIQDRFLPDKAID--LLDESGSRKNLTIATVDPETIKTKIDDAEKQKQAALK 352 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFEELKAQE 450 + R+ K E +E Sbjct: 353 QEDYEKAAFYRDQ--------------VTKLEDMAKKQSNLPENEIPTVTEKDMEQIVEE 398 Query: 451 NSQCDFDPMKMRMESEIRGLLKGME 475 + +K + +++++ L +E Sbjct: 399 KTNIPVGELKAQEQAQLKNLAGDLE 423 >gi|15487810|gb|AAL00952.1| chaperone ATP-dependent protease [Lactobacillus sakei] Length = 709 Score = 153 bits (387), Expect = 9e-36 Identities = 28/266 (10%), Positives = 63/266 (23%), Gaps = 42/266 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 259 GTKYRGEFEDRLKKIIEEIHEDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGEL 318 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 +LI ++ + F D P+ E+ ++ E + + Sbjct: 319 QLIGATTLDEYQKYIEKDAALERRFATVTVDEPTPED--AEQILRGLRPRYEEHHGITIS 376 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + R A D L D+A A L QK + Sbjct: 377 DEALHEAVVLANRYITNRFLPDKAID--LMDEAAAKVRLDAVNQKSP---------IDRL 425 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + E + + A + + E E + + + Sbjct: 426 ETELQSLAKEKEVAVGAQDF-------------------EKAAAIHEKEIIAKAKMAKRQ 466 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKG 473 A E + +I ++ Sbjct: 467 AAEQ-ENGVRTDIQVQPEDIAQVVAQ 491 >gi|68562872|ref|ZP_00602103.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Rubrobacter xylanophilus DSM 9941] Length = 886 Score = 153 bits (386), Expect = 1e-35 Identities = 30/200 (15%), Positives = 59/200 (29%), Gaps = 16/200 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + + + + LI +D + + + + + Sbjct: 326 GTKYRGEFEERLKKVIDEIREHSDELIIFIDELHTVVGAGAAEGAMDASNMLKPALARGE 385 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 +I ++ + FQ PS+E ++ E V+ Sbjct: 386 LHVIGATTIDEYRKNIEKDAALERRFQPVLVSEPSVEET--VEILTGLKDRYEAHHGVKI 443 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + AE R A D L D+ A +K+ + K E+E ++ Sbjct: 444 SEEAIVAAAELSDRYITDRFLPDKAID--LMDQ--AAARVKLRSRTKPEDAREIEEEIKK 499 Query: 387 KQAEADMFQLKADEARREAE 406 Q E D D R + Sbjct: 500 LQREKDRAVSAEDYRRAQEL 519 >gi|1314297|gb|AAC44446.1| ClpC ATPase Length = 825 Score = 152 bits (385), Expect = 2e-35 Identities = 23/201 (11%), Positives = 57/201 (28%), Gaps = 17/201 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 249 GTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPPLARGEL 308 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D P++E E ++ E V T Sbjct: 309 QCIGATTLDEYRKYIEKDRALERRFQPIKVDEPTVE--ESIQILHGLRDRYEAHHRVAIT 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E R A D + + ++++ ++E+E+ + Sbjct: 367 DEALEAAVRLSDRYISDRFLPDKAIDV----IDESGSKVRLKSFTTPKNVKEMENNLSDL 422 Query: 388 QAEADMFQ--LKADEARREAE 406 + E D + ++A + Sbjct: 423 KKEKDAAVQGQEFEKAASLRD 443 >gi|68195609|gb|EAN10049.1| UvrB/UvrC protein:AAA ATPase, central region [Enterococcus faecium DO] Length = 744 Score = 152 bits (384), Expect = 2e-35 Identities = 31/271 (11%), Positives = 83/271 (30%), Gaps = 39/271 (14%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGS-EDARGKKLFWKADELIEKLKSKLI 279 F + + + E +I +D V +I + + + +++ Sbjct: 194 RGQFEERMQKLIEEIRQAENVILFIDEVHEIVGAGSAGDGNMDAGNILKPALARGELQMV 253 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q D P++E ++ E V+ T + Sbjct: 254 GATTLNEYRIIEKDAALERRMQPVRVDEPTVEETI--SILKGLQKRYEDYHHVKYTDEAI 311 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 E A R + A D L D+ + +L ++ K +E ++ + + Sbjct: 312 EAAATLSNRYVQDRFLPDKAID--LLDETGSKKNLTIQIVDPKT----IEKKLQEAEEQK 365 Query: 392 DMFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR----QYLFEE 445 + + D +A + +K K++ + E E Sbjct: 366 VLASREEDFEKAAYYRD----------------QINKLQKMKERQLTEEETPVITEKDME 409 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 ++ + +K + +++++ L ++ Sbjct: 410 KIVEQRTGIPVGELKEKEQTQLKNLADDLKA 440 >gi|50589882|ref|ZP_00331357.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Streptococcus suis 89/1591] Length = 666 Score = 152 bits (384), Expect = 2e-35 Identities = 35/269 (13%), Positives = 83/269 (30%), Gaps = 35/269 (13%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGS-EDARGKKLFWKADELIEKLKSKLI 279 F + + + + +I +D + +I + + + +L+ Sbjct: 215 RGQFEERMQKLMEEIRNRREIILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGEMQLV 274 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q + PS+E ++ + V+ + + Sbjct: 275 GATTLNEYRIIEKDAALERRMQPVKVEEPSVEETIT--ILKGIQNKYQDYHHVKYSDAAI 332 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 E A R + A D L D+A + +L + +I++ RL AE Sbjct: 333 EAAAVLSNRYIQDRFLPDKAID--LLDEAGSKMNLTLNFID-PKEIDQ-----RLIDAEN 384 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER----RQYLFEELK 447 Q DE +A +KY +++ + E E Sbjct: 385 RKAQATRDEDYEKA------------AYFRDQIAKYKEMQKATISEEDIPLITEKEIEAI 432 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGMEM 476 ++ + +K + +S++ L ++ Sbjct: 433 VEQKTNIPVGDLKEKEQSQLVNLASDLKA 461 >gi|19748664|gb|AAL98096.1| putative ATP-dependent protease [Streptococcus pyogenes MGAS8232] Length = 760 Score = 152 bits (384), Expect = 2e-35 Identities = 37/269 (13%), Positives = 86/269 (31%), Gaps = 35/269 (13%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGS-EDARGKKLFWKADELIEKLKSKLI 279 F + + + + + +I +D + +I + + + +L+ Sbjct: 211 RGQFEERMQKLMEEIRNRKDVILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLV 270 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q D PS+E ++ E V+ + + Sbjct: 271 GATTLNEYRIIEKDAALERRMQPVKVDEPSVEETIT--ILKGIQPKYEDYHHVKYSPAAI 328 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 E A R + A D L D+A + +L + +I++ RL +AE Sbjct: 329 EAAAHLSNRYIQDRFLPDKAID--LLDEAGSKMNLTLNFVD-PKEIDK-----RLIEAEN 380 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER----RQYLFEELK 447 Q DE A +KY +++ + +E+ E Sbjct: 381 LKAQATRDEDYERA------------AYFRDQITKYKEMQAQKVDEQDIPIITEKTIEAI 428 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGMEM 476 ++ + +K + +S++ L ++ Sbjct: 429 VEQKTNIPVGDLKEKEQSQLVNLANDLKA 457 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 152 bits (384), Expect = 2e-35 Identities = 17/147 (11%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 + F + + +I +D + I ++ + + Sbjct: 48 GSKYRGEFEERLKSVLNEIKNADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 +LI ++ + FQ+ PS+E+ ++ E V Sbjct: 108 LRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTIA--ILRGLKQRYEAHHKVTI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A R + A D Sbjct: 166 GDDALVAAATLSNRYISGRQLPDKAID 192 >gi|68560433|ref|ZP_00599746.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Rubrobacter xylanophilus DSM 9941] Length = 887 Score = 152 bits (384), Expect = 2e-35 Identities = 28/272 (10%), Positives = 67/272 (24%), Gaps = 30/272 (11%) Query: 217 HTSELFGFVKDVFQHCAPNWDFE-ALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + Q E +I +D + I + + + Sbjct: 327 GTRFRGDFEERMKQLLNELQREEKNIILFIDELHTIVGAGGAEGAVTASNMLKPALARGE 386 Query: 276 S---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ + P+++ ++ E V+ Sbjct: 387 LQVVGATTLDEYRKHVEKDPALERRFQPVLVEEPTVDETIA--ILFGLRDRYEAHHRVRI 444 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + A+ R A D A ++++ ++ +E + Sbjct: 445 SDEAIIAAAQLSERYITDRFLPDKAID----LLDEAAAEVRLRSTVPPVDLKRIEEEIAS 500 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL----SEAEERRQYL 442 + + + D E + R E + Sbjct: 501 LENQKEDAVRAED---YERAAQYKQRIEQLKLELREKQEGWAGNREANAPEVRREDIARI 557 Query: 443 FEELK-------AQENSQCDFDPMKMRMESEI 467 EE QE ++ + + E I Sbjct: 558 LEEWTGIPATNIVQEEAERLLNLEAVLHERVI 589 >AAA_Q75GT3_284-478_PF00004.17 Length = 195 Score = 152 bits (384), Expect = 2e-35 Identities = 17/147 (11%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + D I +D + + ++ + + Sbjct: 48 GAKYRGEFEDRLKAVLKEVTDSDGQTILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 108 LRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPSVEDTI--SILRGLRERYELHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 SDSALVAAALLSDRYISGRFLPDKAID 192 >gi|62513420|ref|ZP_00384970.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Lactobacillus casei ATCC 334] Length = 835 Score = 151 bits (383), Expect = 2e-35 Identities = 29/201 (14%), Positives = 54/201 (26%), Gaps = 15/201 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 261 GTKYRGEFEDRLKKIIDEIYKDGNVILFIDELHTLIGAGGAEGAIDASNILKPALARGEL 320 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 +LI ++ + F D P+ E E ++ E V T Sbjct: 321 QLIGATTLDEYQKYIEKDAALERRFATIQVDEPTEE--EAEQILKGLRPRYEAHHGVTIT 378 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQI--EELESIVR 385 + R A D L D++ A L + K +EL +V Sbjct: 379 DEALHQAVVLSSRYITTRFLPDKAID--LVDESAAKVRLDKANVETKADKLQDELAKLVA 436 Query: 386 LKQAEADMFQLKADEARREAE 406 K+ D + R E Sbjct: 437 DKEDAIDHQDFETAANIRTQE 457 >gi|46135092|ref|ZP_00162367.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Anabaena variabilis ATCC 29413] Length = 831 Score = 151 bits (383), Expect = 3e-35 Identities = 25/199 (12%), Positives = 58/199 (29%), Gaps = 14/199 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + G + + + Sbjct: 267 GTRFRGDFEERIKKIVEEVRSAGNIILVIDEIHTLVGAGGTEGGLDAANILKPALARGEL 326 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+ ++ E V + Sbjct: 327 QCIGATTLDEYRQHIERDAALERRFQPIMVGEPSVAETI--DILYGLRGAYEQHHKVHIS 384 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ R A D L D+A + L+ + +++ + + Sbjct: 385 DEAVVAAAQLADRYISDRFLPDKAID--LIDEAGSRVRLRNSQISPNKELKRQLTDITKS 442 Query: 388 QAEADMFQLKADEARREAE 406 + EA Q D+A + + Sbjct: 443 KNEAVRVQ-DFDKAAKLRD 460 >gi|24379042|ref|NP_720997.1| ATP-dependent protease ClpE [Streptococcus mutans UA159] Length = 753 Score = 151 bits (383), Expect = 3e-35 Identities = 36/268 (13%), Positives = 85/268 (31%), Gaps = 35/268 (13%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGS-EDARGKKLFWKADELIEKLKSKLI 279 F + + + + +I +D + +I + + + +L+ Sbjct: 205 RGQFEERMQKLMEEIRQRQDVILFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLV 264 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q D PS+ ++ E V+ T + Sbjct: 265 GATTLNEYRIIEKDAALERRMQPVKVDEPSVAETIT--ILKGIQPKYEDYHHVKYTDEAI 322 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 E A R + A D L D+A + +L + +I+ RL +AE Sbjct: 323 EAAANLSNRYIQDRFLPDKAID--LLDEAGSKMNLTLNFVD-PKEIDH-----RLIEAEN 374 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER----RQYLFEELK 447 Q DE +A +KY +++ ++ ++ E+ Sbjct: 375 LKAQATRDEDYEKA------------AYFRDQIAKYKEMQSAKLDKENTPVITEKNIEVI 422 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGME 475 ++ + +K + +S++ L ++ Sbjct: 423 VEQKTNIPVGELKEKEQSQLIHLADDLK 450 >gi|67920889|ref|ZP_00514408.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Crocosphaera watsonii WH 8501] Length = 823 Score = 151 bits (383), Expect = 3e-35 Identities = 24/192 (12%), Positives = 55/192 (28%), Gaps = 15/192 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 250 GTKYRGEFEERLKKIMDEIRQAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 309 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS++ ++ E ++ Sbjct: 310 QCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDET--VEILFGLRERYEQHHKLKIL 367 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ A+ R A D L D A + +++ + P +EL+ +R Sbjct: 368 DEALDAAAKLSDRYISDRYLPDKAID--LID--EAGSRVRLINSQLPPAAKELDKELRTI 423 Query: 388 QAEADMFQLKAD 399 + D D Sbjct: 424 LKQKDDAVRSQD 435 >gi|56961903|ref|YP_173625.1| ATP-dependent Clp protease ATP-binding subunit ClpC [Bacillus clausii KSM-K16] Length = 818 Score = 151 bits (383), Expect = 3e-35 Identities = 32/270 (11%), Positives = 76/270 (28%), Gaps = 24/270 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 256 GTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGEL 315 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D P+++ E ++ E V T Sbjct: 316 QCIGATTLDEYRKYIEKDAALERRFQPIQVDEPTID--ESIQILYGLRDRYEAHHRVTIT 373 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D L D A + +++ P ++ELE+ + Sbjct: 374 DEAVEEAVKLSDRYISDRFLPDKAID--LID--EAASKVRLRSYTAPPNLKELEAKLEET 429 Query: 388 QAEADM--FQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 + E D + ++A + +++ K + E E + Sbjct: 430 RKEKDASVQSQEFEKAASLRD-----TEQRLREELEEMKNEWKKKQGQENTEVLVEDIAQ 484 Query: 446 LKAQENSQCDFDPMKMRMES--EIRGLLKG 473 + + + E ++ +L Sbjct: 485 VVSSWTGIPVSKLAEEETERLLKMEEILHE 514 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 151 bits (382), Expect = 3e-35 Identities = 16/147 (10%), Positives = 33/147 (22%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVLQEVTGSEGTFILFIDEMHTLIGAGKGDGAMDASNLLKPALARGE 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ PS+E+ ++ E V+ Sbjct: 108 LHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTI--SILRGLKDKYEQHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R A D Sbjct: 166 TDSALVASATLSNRYITDRFLPDKAID 192 >gi|30409234|dbj|BAC76183.1| ATP-dependent clp protease ATP-binding subunit [Cyanidioschyzon merolae] Length = 821 Score = 151 bits (382), Expect = 3e-35 Identities = 28/203 (13%), Positives = 63/203 (31%), Gaps = 17/203 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + +I +D V + + + + Sbjct: 249 GTKYRGEFEERLKKVMDEIREVGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 308 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+++ ++ E V+ + Sbjct: 309 QCIGATTLEEYRKHIEKDAALERRFQPVMVGEPTVDETI--EILKGLRDRYEEHHRVRIS 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKP-QIEELESIVRL 386 +E A+ + A D L D+A + L + K ++++ V Sbjct: 367 DAALEAAAKLSSQYIADRYLPDKAID--LIDEAGSRVRLMYYKLPKVTLELDKELREVMR 424 Query: 387 KQAE---ADMFQLKADEARREAE 406 + E D F++ A+ RE E Sbjct: 425 LKDEMIREDHFEIAAELRDREKE 447 >AAA_CLPB1_202-396_PF00004.17 Length = 195 Score = 151 bits (381), Expect = 5e-35 Identities = 13/147 (8%), Positives = 37/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLKEVTTSDGQIVLFIDEIHTVVGAGASGGAMDASNLLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D P++ + ++ E+ V+ Sbjct: 108 LRCIGATTLDEHRQHIEKDPALERRFQQVLVDQPTVPDTI--SILRGLKERYEVHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 ADSALVAAAMLSSRYITDRFLPDKAID 192 >gi|50554163|ref|XP_504490.1| hypothetical protein [Yarrowia lipolytica] Length = 887 Score = 151 bits (381), Expect = 5e-35 Identities = 32/264 (12%), Positives = 70/264 (26%), Gaps = 18/264 (6%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDA-----RGKKLFWKADELIEKLKS 276 F + + D + +I +D + + + + + Sbjct: 259 DFEERIKGVLKEIEDSKDMIILFIDEIHMLMGDGKGDAANLLKPMLARGSLHCIGATTNE 318 Query: 277 KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAE 336 + ++ FQ+ D P++ ++ E+ V+ + A+ Sbjct: 319 EYRKHVEKDAAFERRFQKIDVREPTIRETVA--ILRGIQNKYELHHGVRILDSALVSAAQ 376 Query: 337 EKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEADMFQL 396 R + A D L D A + + R + ++ LE + L E + Sbjct: 377 LASRYLTYRKLPDSAVD--LVD--EAAAAVAVARDSRPEHLDSLERELDLLMIEVKALER 432 Query: 397 K--ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE----ERRQYLFEELKAQE 450 AD+ +E + + R E + + E Sbjct: 433 DQHADQGTKERLDAAKHRVADIEEELGPLRETFERERAGHVELNNLKHKVDELETKALDA 492 Query: 451 NSQCDFDPMKMRMESEIRGLLKGM 474 + D I L K + Sbjct: 493 ERRRDTSTAADLRYFAIPDLKKRI 516 >gi|32307598|gb|AAP79204.1| ClpB protease [Bigelowiella natans] Length = 256 Score = 150 bits (380), Expect = 6e-35 Identities = 25/197 (12%), Positives = 59/197 (29%), Gaps = 16/197 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGS-EDARGKKLFWKADELIEKLK 275 F + + + +I +D + I G ++ + + Sbjct: 47 GAKYRGEFEERLKAVINEVKEDGTIILFIDEIHTIVGAGKAGDSGMDAGNLLKPMLARGE 106 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ + P+ E ++ E+ V+ Sbjct: 107 LRCIGATTVDEYRQYMEKDAALERRFQQVMVEEPTPEETI--SILRGLCEKYELFHKVRI 164 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + R A D L D A + ++ + K ++EE+E + Sbjct: 165 SDDSLIEAVRLSDRYIADRFLPDKAID--LVD--EAASKVQSQATSKPIELEEVERTLLR 220 Query: 387 KQAEADMFQLKADEARR 403 + E + A+ R Sbjct: 221 YEMELLSLKRPANSEIR 237 >AAA_CLPB2_203-397_PF00004.17 Length = 195 Score = 150 bits (379), Expect = 8e-35 Identities = 15/147 (10%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + ++ + + Sbjct: 48 GAKFRGEFEERLKAVLKEVTESGGNIVLFIDEIHTVVGAGATQGAMDAGNLLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 108 LRCIGATTLDEYRKYIEKDAALERRFQQVYVDQPSVEDTI--SILRGLKERYEVHHGVKI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 SDSSLVAAATLSSRYISDRFLPDKAID 192 >AAA_CLPB1_203-397_PF00004.17 Length = 195 Score = 150 bits (379), Expect = 9e-35 Identities = 17/147 (11%), Positives = 41/147 (27%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALI-KELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D E +I +D + + ++ + + Sbjct: 48 GAKFRGEFEERLTAVLKEVTDSEGIIILFIDEMHTVVGAGAVQGSMDAGNLLKTMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 108 LRCIGATTLGKYRQYIEKDAALERRFQQVFVDQPTVEDTI--SILRGLKERYEVHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 SDNALVAAAVLSTRYISDRFLPDKAID 192 >gi|68172787|ref|ZP_00546068.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Frankia sp. CcI3] Length = 834 Score = 150 bits (378), Expect = 9e-35 Identities = 31/265 (11%), Positives = 69/265 (26%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + ++ + + Sbjct: 255 GSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGEL 314 Query: 277 KLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I + + FQ PS+ + ++ E V T Sbjct: 315 QTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSVAHTI--EILKGLRDRYEAHHRVSIT 372 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D A + +++ R P + E + + Sbjct: 373 DAALVAAASLADRYISDRFLPDKAID--LID--EAGSRMRIRRMTAPPDLREFDERI--- 425 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + A + K LR E + + + Sbjct: 426 ----AAVRRDKESAIDAQDF-----------------EKAASLRDKEKTLLSEK--AKRE 462 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 + + D D + + EI +L Sbjct: 463 KEWKAG-DMDVVAEVGDEEIAEVLA 486 >AAA_Q9LF37_277-471_PF00004.17 Length = 195 Score = 150 bits (378), Expect = 9e-35 Identities = 16/147 (10%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + D +I +D + + ++ + + Sbjct: 48 GAKYRGEFEDRLKAVLKEVTDSEGQIILFIDEIHTVVGAGATNGAMDAGNLLKPMLGRGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 108 LRCIGATTLDEYRKYIEKDPALERRFQQVYVDQPTVEDTI--SILRGLRERYELHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 SDSALVEAAILSDRYISGRFLPDKAID 192 >gi|26553830|ref|NP_757764.1| ATP-dependent protease binding subunit [Mycoplasma penetrans HF-2] Length = 705 Score = 150 bits (378), Expect = 9e-35 Identities = 30/270 (11%), Positives = 75/270 (27%), Gaps = 24/270 (8%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSED--ARGKKLFWKADELIEKLK---- 275 F K + A+I +D + ++ + G ++ + + Sbjct: 107 EFEKRLNALIKEAKQNNGAVILFIDEIHQLMGMGKAGNNSGMDAANILKPIMARGEIKII 166 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ ++ + FQ+ + P+ E E ++ EI V+ Sbjct: 167 GATTSNEYRQYIEKDGALERRFQKILVEEPTPE--EALTIMRGLKEKWEIYHKVRIQDNA 224 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + + R A D L D A +K E + + + + E Sbjct: 225 LVASVKLSERYISDKYLPDKAID--LID--EAAAKIKTEAHTSPSE--PINKKIFYLETE 278 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK--- 447 + ++E ++ + + + + E Sbjct: 279 KIALSKEEGTNQKERINEIEIELEKLKQERDLVEKEWKEQKEQQVALNKIKKEIEKNNWD 338 Query: 448 -AQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + +Q ++ + S + L K +E Sbjct: 339 VERYQNQGEYTEASKILYSVLPELKKKLEA 368 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 150 bits (378), Expect = 1e-34 Identities = 13/147 (8%), Positives = 32/147 (21%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVLNEVTAAEGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGE 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ P++E+ ++ E V+ Sbjct: 108 LHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDT--VSILRGLKDKYEQHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + R A D Sbjct: 166 ADSALVAAVTLSNRYITDRFLPDKAID 192 >AAA_Q6ALY6_203-397_PF00004.17 Length = 195 Score = 150 bits (378), Expect = 1e-34 Identities = 15/147 (10%), Positives = 31/147 (21%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + +I +D + I + + + Sbjct: 48 GAKYRGEFEDRLKAVLKEVEKQAGNIILFIDELHTIVGAGASEGSMDASNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ PS+E+ ++ EI V+ Sbjct: 108 LHCVGATTLNEYKKYIEKDTALERRFQPVLVQEPSVEDTVA--ILRGIKEKYEIHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 R A D Sbjct: 166 QDAATVAAVTLSNRYIADRFLPDKAID 192 >AAA_Q5NE82_201-395_PF00004.17 Length = 195 Score = 150 bits (378), Expect = 1e-34 Identities = 16/147 (10%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKFRGDFEERLKSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGE 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K + + + FQ+ D P++E+ ++ E+ V Sbjct: 108 LKCVGATTLDEYREYVEKDPALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHGVNI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R + A D Sbjct: 166 TDSAIVSAATLSHRYITDRQLPDKAID 192 >gi|62526947|ref|ZP_00388255.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Streptococcus thermophilus LMD-9] Length = 752 Score = 150 bits (378), Expect = 1e-34 Identities = 33/269 (12%), Positives = 84/269 (31%), Gaps = 35/269 (13%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKLKSKLI 279 F + + + + +I +D + +I + + + +L+ Sbjct: 199 RGQFEERMQKLMEEIRQRQDVILFIDEIHEIVGAGNTGDGNMDAGNILKPALARGELQLV 258 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q D P++E ++ + V+ T + Sbjct: 259 GATTLNEYRIIEKDAALERRMQPVKVDEPTVEETIT--ILRGIQPKYQDYHHVKYTDEAI 316 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 AE R + A D L D++ + +L + +++ RL +AE Sbjct: 317 TAAAELSNRYIQDRFLPDKAID--LLDESGSKMNLTLNFID-PKDLDK-----RLIEAEN 368 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER----RQYLFEELK 447 Q DE +A +KY +++ +++ E Sbjct: 369 LKAQATRDEDFEKA------------AYFRDQIAKYKEMQQQTIKDQDMPIITEKHIEAI 416 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGMEM 476 ++ + +K + +S++ L ++ Sbjct: 417 VEQKTNIPIGDLKEKEQSQLLNLADDLKA 445 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 150 bits (378), Expect = 1e-34 Identities = 14/147 (9%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLKEVTSSQGQIVLFIDEIHTVVGAGATGGAMDASNLLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ PS+E+ ++ E+ V+ Sbjct: 108 LRCIGATTINEHRQHIEKDPALERRFQQVLISEPSIEDTI--SILRGLKEKYEVHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R + A D Sbjct: 166 SDSALVAAAVLSNRYISERYLPDKAID 192 >gi|47459200|ref|YP_016062.1| ATP-dependent Clp protease, ATPase subunit [Mycoplasma mobile 163K] Length = 711 Score = 149 bits (377), Expect = 1e-34 Identities = 27/271 (9%), Positives = 84/271 (30%), Gaps = 24/271 (8%) Query: 223 GFVKDVFQ-HCAPNWDFEALIKELDFVRKIFRGSE--DARGKKLFWKADELIEKLK---- 275 F + + + I +D + + + + + + Sbjct: 107 QFEERIKSLMDKIEKNQGKYIIFIDEIHLLIGTGKNSSNSTMDAANIFKPALARGQMQLV 166 Query: 276 -----SKLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 + +++ + + Q+ P++E+ ++ E V+ + + Sbjct: 167 GATTIEEYRKYIESDSALERRMQKVKVAEPNIEDTIT--ILRGIKGRFETFHNVKISDKA 224 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAE 390 + A R A D L D A + +K E + ++E+++ + + E Sbjct: 225 LIAAANLSARYISDRFLPDKAID--LVD--EAASTIKTEINSQPEELEKIQQKIITFETE 280 Query: 391 ADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLR-----LSEAEERRQYLFEE 445 + + + K++ + L++ + + + L E Sbjct: 281 KAALKSENTIQSNLRVEELNNELKKLNSEHKILSEKWISEKNVVIELNDKKRKIESLKHE 340 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + +N ++ M S++ + K +++ Sbjct: 341 VSKLQNEG-LYEKASKIMYSDLPKIEKELKI 370 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 149 bits (377), Expect = 1e-34 Identities = 15/147 (10%), Positives = 36/147 (24%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++ +D + I + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLQEVKQSDGQILLFIDEIHTIVGAGKTDGAMDAGNMLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ P++E+ ++ EI V Sbjct: 108 LHCIGATTLDEYRQYIEKDAALERRFQKVLVPEPTVEDT--VSILRGLKERFEIHHGVNI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 HDNALVAAASLSNRYITDRFLPDKAID 192 >AAA_Q5H380_238-432_PF00004.17 Length = 195 Score = 149 bits (377), Expect = 1e-34 Identities = 14/147 (9%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQH-CAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 48 GAKFRGEFEERLKAVLSDLSKTEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ P++E+ ++ + V+ Sbjct: 108 LHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKERYAVHHGVEI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R + A D Sbjct: 166 TDPAIVAAATLSNRYITDRQLPDKAID 192 >gi|28378034|ref|NP_784926.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Lactobacillus plantarum WCFS1] Length = 739 Score = 149 bits (377), Expect = 1e-34 Identities = 35/274 (12%), Positives = 87/274 (31%), Gaps = 41/274 (14%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + Q +I +D + +I G + + +L+ Sbjct: 198 RGQFEQRMQQLMKEVQSNPNIILFIDEIHEIMGAGNAEGGMDAGNVLKPALARGDFQLVG 257 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ + PS+E ++ E V+ + Sbjct: 258 ATTLNEYRDIEKDAALARRFQPVTVNEPSVEESI--KILEGIQKKYEDYHHVKYDQDAIV 315 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A D L D+A + +L ++ K E+++ + KQ D Sbjct: 316 AAVKLSNRYIQDRFLPDKAID--LLDEAGSRKNLTLKTVDPKTIQEKIDEAEKQKQ---D 370 Query: 393 MFQLK-ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--------RQYLF 443 + + ++A + +K K + E+ ++ Sbjct: 371 ALKKEDYEKAAYYRD----------------QVAKLEKAKPDESSDQPNNDTATVTVKDM 414 Query: 444 EELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 E++ ++ S D + +++++ L ++ T Sbjct: 415 EQIVEEKTSIPVGDLQ-AKEQAQMKTLAPDLKST 447 >AAA_CLPB_193-386_PF00004.17 Length = 194 Score = 149 bits (376), Expect = 2e-34 Identities = 18/146 (12%), Positives = 39/146 (26%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + + + + Sbjct: 48 GAKFRGEFEERLKGVIDEVVKSAGEIILFVDEIHTIVGAGKTEGSPDAGNMLKPALARGE 107 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 LI ++ + FQ D PS+E+ ++ ++ V+ T Sbjct: 108 LHLIGATTLDEYREIEKDAALERRFQPVFVDEPSVEDTI--SILRGIKERYQVHHNVEIT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + A R + A D Sbjct: 166 DPALVAAATLSNRYITDRQLPDKAID 191 >gi|68512803|gb|EAN36605.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Rubrobacter xylanophilus DSM 9941] Length = 834 Score = 149 bits (376), Expect = 2e-34 Identities = 33/265 (12%), Positives = 78/265 (29%), Gaps = 40/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + D +I +D + + + + + Sbjct: 257 GSKYRGEFEERLKKIMKEIIDHGDIILFIDEIHNLVGAGAAEGAIDAASILKPALARGEI 316 Query: 277 KLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 ++I + + FQ P++E E ++ E ++ T Sbjct: 317 QVIGATTIDEYRKYVEKDKALERRFQTIQVGEPTVEETEL--ILKGLRERYEEHHKIEIT 374 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + + R A D L D A + +K++ + P +E++ Sbjct: 375 DEALRAASRLGDRYISDRFLPDKAID--LVD--EAASKMKIKTMSQPPYYKEIDD----- 425 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 E + + + A E + +LR SE + + E + Sbjct: 426 --ELAEVRRRKEAAIDSQEY-----------------EEAARLRDSEKKLALRKRELERQ 466 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 +E + + E+EI ++ Sbjct: 467 WREGKGEEQRRVS-IGENEIAEIVS 490 >gi|22536667|ref|NP_687518.1| ATP-dependent Clp protease, ATP-binding subunit [Streptococcus agalactiae 2603V/R] Length = 753 Score = 149 bits (376), Expect = 2e-34 Identities = 36/268 (13%), Positives = 84/268 (31%), Gaps = 35/268 (13%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGS-EDARGKKLFWKADELIEKLKSKLI 279 F + + + + +I +D + +I + + + +L+ Sbjct: 208 RGQFEERMQKLMEEIRQRQDVILFIDEIHEIVGAGTAGEGSMDAGNILKPALARGELQLV 267 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q D PS+E ++ E V+ + Sbjct: 268 GATTLNEYRIIEKDAALERRMQPVKVDEPSVEETIT--ILKGIQKKYEDYHHVKYNNDAI 325 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 E A R + A D L D+A + +L + +I++ RL +AE Sbjct: 326 EAAAVLSNRYIQDRFLPDKAID--LLDEAGSKMNLTLNFVD-PKEIDQ-----RLIEAEN 377 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER----RQYLFEELK 447 Q +E A +KY +++ + +++ E Sbjct: 378 LKAQATREEDYERA------------AYFRDQIAKYKEMQQQKVDDQDTPIITEKTIEHI 425 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGME 475 +E + +K + +S++ L ++ Sbjct: 426 IEEKTNIPVGDLKEKEQSQLINLADDLK 453 >gi|18146107|dbj|BAB82147.1| ClpC adenosine triphosphatase [Clostridium perfringens str. 13] Length = 814 Score = 148 bits (375), Expect = 2e-34 Identities = 33/273 (12%), Positives = 75/273 (27%), Gaps = 23/273 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + + D + +I +D + I + + + Sbjct: 256 GAKYRGEFEERLKKVLNEVKDSDDIILFIDEMHNIVGAGGAEGAIDASNILKPALARGEI 315 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + + FQ PS E+ ++ E+ V+ T Sbjct: 316 QCIGATTTDEYRKNIEKDSALERRFQPVVVKEPSKED--SVLILKGLREKYEVHHNVKLT 373 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E R A D L D A +++E P++ + E ++ Sbjct: 374 DEAIEAAVNLSSRYITDRFLPDKAID--LID--EAAAKVRIESMIVPPRLFKQEELIANL 429 Query: 388 QAEADMFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKY------LKLRLSEAEERR 439 + E + D A + + Y K +++ + Sbjct: 430 KVEKEEAIKLQDFELAAKLRDEELMLQEELERDKELWREENYNKIYEVNKEHIAKVVSKW 489 Query: 440 QYLFEELKAQENSQCDFDPMKMRMESEIRGLLK 472 + E ++ S + + I L Sbjct: 490 TQIPVERLTEKESSRLLKLEEKLSKRVIGQLEA 522 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 148 bits (375), Expect = 2e-34 Identities = 14/147 (9%), Positives = 34/147 (23%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + +I +D + + ++ + + Sbjct: 48 GAKYRGEFEDRLKALLDEVKSSDGEVILFIDEIHTLVGAGATEGALDASNMLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ PS+E ++ E+ ++ Sbjct: 108 LRCIGATTLKEYQKYIEKDAALERRFQPVYVKEPSVEET--VTILRGLKGRYELHHGIRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 LDSALIAAATLSNRYISDRFLPDKAVD 192 >gi|29840119|ref|NP_829225.1| ATP-dependent Clp protease, ATP-binding subunit [Chlamydophila caviae GPIC] Length = 846 Score = 148 bits (375), Expect = 3e-34 Identities = 39/278 (14%), Positives = 78/278 (28%), Gaps = 39/278 (14%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + ++ +D + I + + + Sbjct: 273 GTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASNILKPALARGEI 332 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ PS++ ++ E V T Sbjct: 333 QCIGATTIDEYRKHIEKDAALERRFQKIIVQPPSVDETI--EILRGLKKKYEEHHNVAIT 390 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ A + A D A +++ + ++ +LE+ Sbjct: 391 EEALKAAATLSDQYVHGRFLPDKAID----LLDEAGARVRVNTMDQPTELMKLEA----- 441 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQY------ 441 + E + +E E K L+ RLS ++ + Sbjct: 442 EIETTKLAKEQAIGTQEYEKAAGLRD----------EEKKLRERLSNMKQEWENHKEEHQ 491 Query: 442 --LFEELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 + EE AQ S P E+E LLK +E T Sbjct: 492 IPVDEEAVAQVVSLQTGIPSARLTEAESEKLLK-LEDT 528 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 148 bits (375), Expect = 3e-34 Identities = 13/147 (8%), Positives = 36/147 (24%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + ++I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVLGEVTAAEGSIILFIDEMHTLVGAGKGDGAMDASNLLKPALARGE 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ P++E+ ++ E+ V+ Sbjct: 108 LHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDT--VSILRGLKEKYEVHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 SDSAIVAAATLSNRYIADRFLPDKAID 192 >gi|33236295|gb|AAP98384.1| class III stress response-related ATPase [Chlamydophila pneumoniae TW-183] Length = 845 Score = 148 bits (375), Expect = 3e-34 Identities = 34/273 (12%), Positives = 73/273 (26%), Gaps = 29/273 (10%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + ++ +D + I + + + Sbjct: 274 GTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASNILKPALARGEI 333 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ PS++ ++ E V T Sbjct: 334 QCIGATTIDEYRKHIEKDAALERRFQKIVVHPPSVDETI--EILRGLKKKYEEHHNVFIT 391 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ A + A D A +++ + + +LE+ Sbjct: 392 EEALKAAATLSDQYVHGRFLPDKAID----LLDEAGARVRVNTMGQPTDLMKLEA----- 442 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL---FE 444 + E + +E E + ++ + ++ E Sbjct: 443 EIENTKLAKEQAIGTQEYE-----KAAGLRDEEKKLRERLQSMKQEWENHKEEHQVPVDE 497 Query: 445 ELKAQENSQCDFDPMKMRMESEIRGLLKGMEMT 477 E AQ S P E+E LLK +E T Sbjct: 498 EAVAQVVSLQTGIPSARLTEAESEKLLK-LEDT 529 >gi|24213091|ref|NP_710572.1| ATPase (clpc) [Leptospira interrogans serovar Lai str. 56601] Length = 846 Score = 148 bits (375), Expect = 3e-34 Identities = 25/268 (9%), Positives = 76/268 (28%), Gaps = 19/268 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 260 GTKYRGEFEERLKKIMKEITSSTNIIIFIDELHTLIGAGAAEGAVDAANILKPALARGEL 319 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + + FQ PS+++ ++ E V+ + Sbjct: 320 QCIGATTSAEYRKYIEKDSALERRFQVVKVAEPSVDD--AIQILQGLKKAYETHHKVRYS 377 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + +E + R A D + D+A A L + I++LE ++ Sbjct: 378 DKALEQSVKLSHRYINDRYLPDKAID--IIDEAGAKARLANC--ARPQTIKDLEEEIKSL 433 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 ++ + A+ + + + ++ + + Sbjct: 434 ASKKEELVR----AQEYEKAAGVRDEVNRKKQAMEEKLRSWQEKMEDFAVNIEEDDILSV 489 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGME 475 + + M+ ++ L + ++ Sbjct: 490 ISLWTGIPLEKMEESESDKLLRLEEELK 517 >gi|18203438|sp|Q9S5Z2|CLPE_LACLC ATP-dependent Clp protease ATP-binding subunit clpE Length = 748 Score = 148 bits (374), Expect = 3e-34 Identities = 33/271 (12%), Positives = 83/271 (30%), Gaps = 39/271 (14%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGS-EDARGKKLFWKADELIEKLKSKLI 279 F + + + +I +D + +I + + + +L+ Sbjct: 198 RGQFEERMQKLMDEIRKRNDVIMFIDEIHEIVGAGSAGDGNMDAGNILKPALARGELQLV 257 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q D PS++ ++ A E V+ T + Sbjct: 258 GATTLNEYRIIEKDAALERRMQPVKVDEPSVDETIT--ILRGIQARYEDYHHVKYTDEAI 315 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 E A R + A D L D++ + +L + K E++ + +++ Sbjct: 316 EAAAHLSNRYIQDRFLPDKAID--LLDESGSKKNLTL----KFVDPEDINRRIADAESKK 369 Query: 392 DMFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER----RQYLFEE 445 + D +A + SK +L+ E + E Sbjct: 370 NEATKAEDFEKAAHFRD----------------QISKLRELQKQEVTDEDMPVITEKDIE 413 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 ++ +Q +K + ++++ L ++ Sbjct: 414 QIVEQKTQIPVGDLKEKEQTQLINLADDLKA 444 >AAA_CLPB_193-386_PF00004.17 Length = 194 Score = 148 bits (374), Expect = 3e-34 Identities = 18/146 (12%), Positives = 39/146 (26%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVIQETVQSAGQIILFIDEIHTVVGAGKAEGAVDAGNMLKPALARGE 107 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 LI ++ + FQ D PSLE ++ E+ V+ + Sbjct: 108 LHLIGATTLDEYREIEKDPALERRFQPVFVDEPSLEET--VSILRGIKEKYEVHHGVRIS 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + A+ R + A D Sbjct: 166 DPALIAAAQLSHRYIADRKLPDKAID 191 >gi|29375303|ref|NP_814457.1| ATP-dependent Clp protease, ATP-binding subunit ClpE [Enterococcus faecalis V583] Length = 750 Score = 148 bits (374), Expect = 3e-34 Identities = 27/269 (10%), Positives = 82/269 (30%), Gaps = 35/269 (13%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKLKSKLI 279 F + + + + E +I +D V +I + + + +L+ Sbjct: 199 RGQFEERMQKLIEEITEAENVILFIDEVHEIVGAGAAGDGNMDAGNILKPALARGELQLV 258 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q D P++ ++ E V+ T + Sbjct: 259 GATTLNEYRIIEKDAALERRMQPVQVDEPTVAETIT--ILHGLQKRYEDYHHVKYTDEAI 316 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 A R + A D L D++ + +L ++ I++ + ++ +A Sbjct: 317 NAAANLSNRYIQDRFLPDKAID--LLDESGSKMNLTIQLVD-PKTIDKKLAEAEQQKQQA 373 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR----QYLFEELK 447 + ++A + +K ++ + + E Sbjct: 374 SAEE-DFEKAAYYRD----------------QINKLQAMKEKQISDEETPVITEKDIEAI 416 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGMEM 476 ++ + +K + +++++ L ++ Sbjct: 417 VEQKTGIPVGDLKEKEQTQLKNLAVDLKA 445 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 148 bits (373), Expect = 4e-34 Identities = 17/147 (11%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D PS+E+ ++ EI V Sbjct: 108 LHCVGATTLDEYRQYIEKDAALERRFQKVFVDEPSVEDTIA--ILRGLKERYEIHHHVDI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R + A D Sbjct: 166 TDPAIVAAATLSHRYISDRQLPDKAID 192 >gi|76163351|gb|EAO57534.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chloroflexus aurantiacus J-10-fl] Length = 833 Score = 148 bits (373), Expect = 4e-34 Identities = 31/265 (11%), Positives = 74/265 (27%), Gaps = 45/265 (16%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + I +D I + + + Sbjct: 261 GTKYRGQFEERLKRVIDEIKES-RCILFIDEFHTIIGAGGAEGTLDAANILKPALSRGEL 319 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D PS+E+ ++ + E +Q + Sbjct: 320 QTIGATTLDEYRKYIERDAALERRFQPVMVDEPSIEDTI--QILRGIKSRYEDFHQLQIS 377 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R + A D L D A + ++M R P++ + + Sbjct: 378 DEAIRAAAVLSARYVPDRQLPDKAID--LID--EAASRVRMYRSATPPRLRDALRGL--- 430 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL--RLSEAEERRQYLFEE 445 + + + + A + + + ++ R+ E E + Sbjct: 431 ----EALRKEREAALEDQQ----------FELANDLREREERMLSRIQEIEAELGTRSD- 475 Query: 446 LKAQENSQCDFDPMKMRMESEIRGL 470 E + + E +I + Sbjct: 476 ----ERYERPY-----VTEEDIAEV 491 >AAA_CLPB1_203-399_PF00004.17 Length = 197 Score = 148 bits (373), Expect = 4e-34 Identities = 17/149 (11%), Positives = 41/149 (27%), Gaps = 14/149 (9%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGS--EDARGKKLFWKADELIEK 273 F + + +I +D V + E + ++ + Sbjct: 48 GAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAGNLLKPMLAR 107 Query: 274 LKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + + I ++ + FQ+ PS+++ ++ E+ V Sbjct: 108 GELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTI--SILRGLKEKYEVHHGV 165 Query: 325 QDTARKMEVVAEEKMRMFKKARSVLDACD 353 + T + A R + A D Sbjct: 166 KITDSALVAAATLSHRYIQDRFLPDKAID 194 >gi|48871265|ref|ZP_00323981.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pediococcus pentosaceus ATCC 25745] Length = 821 Score = 148 bits (373), Expect = 4e-34 Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 15/201 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 255 GTKYRGEFEDRLKKVIEEIRNDGQVIVFIDELHTLIGAGGAEGAIDASNILKPALARGEL 314 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++A + F + + D P+ E ++ E V+ + Sbjct: 315 QTIGATTLTEYQKYIEADAALERRFAKVEVDEPT--EAEAVQILRGIRPKYEEHHQVKIS 372 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKM--ERQKKKPQIEELESIVR 385 ++ R A D L D+A A + ++ KK + LE + Sbjct: 373 DDAIQQAVTLSSRYIADRFLPDKAID--LIDEAAAKIRIDASEKQVKKVTDEDRLEKLRT 430 Query: 386 LKQAEADMFQLKADEARREAE 406 K+ D + R+ E Sbjct: 431 AKEEAIDNQDFEKAADIRKKE 451 >gi|53763100|ref|ZP_00163644.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Synechococcus elongatus PCC 7942] Length = 839 Score = 148 bits (373), Expect = 4e-34 Identities = 35/265 (13%), Positives = 74/265 (27%), Gaps = 39/265 (14%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 264 GTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 323 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+++ ++ E ++ Sbjct: 324 QCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDDTI--EILRGLRERYEQHHKLKIA 381 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E A+ R A D L D A + +++ + P +EL+ Sbjct: 382 DEALEAAAKLADRYISDRFLPDKAID--LID--EAGSRVRLMNSQLPPAAKELDK----- 432 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 E D+A R + K +LR E E + Q Sbjct: 433 --ELRQVLKDKDDAVRSQDFD-----------------KAGELRDREMEIKTQIRSIAQS 473 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 + + D + E +I ++ Sbjct: 474 KKADGTSSTDDSPIVTEEDIAHIVA 498 >AAA_Q5X4G2_201-395_PF00004.17 Length = 195 Score = 148 bits (373), Expect = 4e-34 Identities = 17/147 (11%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKGVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 108 LHCIGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVEI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R + A D Sbjct: 166 TDPALVAAAMLSHRYISDRQLPDKAID 192 >gi|23003239|ref|ZP_00046906.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Lactobacillus gasseri] Length = 722 Score = 148 bits (373), Expect = 4e-34 Identities = 35/269 (13%), Positives = 88/269 (32%), Gaps = 38/269 (14%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + Q + +I +D + ++ G + + +LI Sbjct: 189 RGQFEQRMQQLIKELEQNDNIILFIDEIHELVGTGNAEGGMDAGNIIKPALARGDFQLIG 248 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + + FQ + P+ E ++ E V T ++ Sbjct: 249 ATTIKEYRNIEKDSALARRFQPVEVKEPTTEET--VKILQGIRKRYEDYHHVHYTDEAIQ 306 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A D L D+A + +L + + E L++ LKQ + Sbjct: 307 AAVALSSRYIQDRFLPDKAID--LLDEAGSRMNLTIPYVDSEKIKERLDAAENLKQ---E 361 Query: 393 MFQLK-ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-----ERRQYLFEEL 446 + + ++A + KY KL+ + + + + + ++ Sbjct: 362 ALKNEDYEKAAYYRD----------------QIEKYEKLKDQKVDPDQTPKITEKIMNKI 405 Query: 447 KAQENSQCDFDPMKMRMESEIRGLLKGME 475 ++ + D K + E++++ L ++ Sbjct: 406 VEEKTNIPVGDLQK-QEETQLKNLSTDLK 433 >gi|67660471|ref|ZP_00457817.1| AAA ATPase, central region:AAA ATPase, central region [Burkholderia cenocepacia AU 1054] Length = 711 Score = 148 bits (373), Expect = 5e-34 Identities = 31/263 (11%), Positives = 61/263 (23%), Gaps = 21/263 (7%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + +I +D I A + + + Sbjct: 105 EFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAA 164 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + PS ++ E V+ + Sbjct: 165 TTWSEYKKYFEKDAALARRFQVVKVEEPS--EPLAAAMLRGMSGLMEKHFNVRILDDAIT 222 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A A + + I++ + + AE Sbjct: 223 EAVRLSHRYISGRQLPDKAISV----LDTACAKVALAHSATPAAIDDTKKRIERIDAEIA 278 Query: 393 MFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKA 448 + +A A E +Y R+ AE E R L Sbjct: 279 SLEREAAGGAAHDERLGELRGARDTALEQLAKDEERYEAERVIVAEITELRDALDRARGP 338 Query: 449 QENSQ-CDFDPMKMRMESEIRGL 470 E+ Q D + ++ + L Sbjct: 339 SEDGQPVDVQATREKLAERVAAL 361 >AAA_Q5E7D5_201-395_PF00004.17 Length = 195 Score = 147 bits (372), Expect = 5e-34 Identities = 17/147 (11%), Positives = 41/147 (27%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + ++I +D V + + + + + Sbjct: 48 GAKFRGEFEERLKAVLNELAKEEGSVILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ EI V+ Sbjct: 108 LHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTVA--ILRGLKERYEIHHHVEI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R + A D Sbjct: 166 TDPAIVAAASLSHRYISDRQLPDKAID 192 >gi|22255857|gb|AAM94782.1| CalR4 [Micromonospora echinospora] Length = 797 Score = 147 bits (372), Expect = 5e-34 Identities = 31/264 (11%), Positives = 72/264 (27%), Gaps = 42/264 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + ++ + + Sbjct: 217 GSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGEL 276 Query: 277 KLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I + + FQ PSL + ++ E V T Sbjct: 277 QTIGATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHTI--EILKGLRDRYEAHHRVSIT 334 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D+A A +++ R P + + + + Sbjct: 335 DAALVAAATLADRYISDRFLPDKAID--LIDEAGA--RMRIRRMTAPPDLRDFDERIAQ- 389 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + A + + +LR E + Q + + Sbjct: 390 ------VRRDKESAIDAQDF-----------------ERAAQLRDKEKQLLGQK--AQRE 424 Query: 448 AQENSQCDFDPMKMRMESEIRGLL 471 + + D D + + +I +L Sbjct: 425 KEWKAG-DLDVVSEVDDEQIAEVL 447 >gi|67545689|ref|ZP_00423609.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Burkholderia vietnamiensis G4] Length = 890 Score = 147 bits (372), Expect = 5e-34 Identities = 28/245 (11%), Positives = 57/245 (23%), Gaps = 20/245 (8%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + +I +D I A + + + Sbjct: 284 EFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAA 343 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + PS ++ E V+ + Sbjct: 344 TTWSEYKKYFEKDAALARRFQVVKVEEPS--EPLAAAMLRGMSGLMEKHFNVRILDDAIT 401 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A A + + I++ + + AE Sbjct: 402 EAVRLSHRYISGRQLPDKAISV----LDTACAKVALAHSATPAAIDDTKKRIERIDAEIA 457 Query: 393 MFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELKA 448 + +A + E ++Y R AE E R+ L A Sbjct: 458 SLEREAAGGASHDERLGELRGARDTALAQLSDDEARYEAERAIVAEITELRETLDRARHA 517 Query: 449 QENSQ 453 E+ + Sbjct: 518 SEDGE 522 >gi|16803037|ref|NP_464522.1| ATP-dependent protease [Listeria monocytogenes EGD-e] Length = 724 Score = 147 bits (372), Expect = 5e-34 Identities = 31/267 (11%), Positives = 79/267 (29%), Gaps = 37/267 (13%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + Q + + I +D V I + + ++I Sbjct: 184 RGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQMIG 243 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ PS + ++ E V + + Sbjct: 244 ATTLKEYRTIEKDAALERRFQPVTVSEPSTKETLT--ILNGLKPKYEDFHEVVYSPEALT 301 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA- 391 E R + A D L D+ + +L +E+ + + V + E Sbjct: 302 AAVELSARYIQDRHLPDKAID--LMDEVGSKYNLSIEKLDENT----VSERVARLEDEKN 355 Query: 392 DMFQLK-ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR---QYLFEELK 447 Q++ ++A + + ++ + + S + R Q + Sbjct: 356 QALQMEDYEKAAKVRD----------------EITRLEENKTSNSFSERPVIQASDIQAI 399 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGM 474 +E + ++ +S+++ L + + Sbjct: 400 IEEKTGIPVGRLQEDEQSKMKNLERNL 426 >AAA_Q5LND5_201-395_PF00004.17 Length = 195 Score = 147 bits (372), Expect = 5e-34 Identities = 14/147 (9%), Positives = 35/147 (23%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVLTEVTEAAGEIILFIDEMHTLVGAGKSDGAMDAANLIKPALARGE 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I + + FQ + P++E+ ++ E+ V Sbjct: 108 LHCIGATTLDEYRKYVEKDAALARRFQPVLVEEPTVEDTI--SILRGIKEKYELHHGVDI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 SDSALVAAATLSHRYITDRFLPDKAID 192 >gi|14194530|sp|Q9PKA8|CLPC_CHLMU Probable ATP-dependent Clp protease ATP-binding subunit Length = 870 Score = 147 bits (372), Expect = 5e-34 Identities = 25/242 (10%), Positives = 67/242 (27%), Gaps = 34/242 (14%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + ++ +D + I + + + Sbjct: 293 GTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASHILKPALARGEI 352 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ PS++ ++ E V T Sbjct: 353 QCIGATTLDEYRKHIEKDAALERRFQKIVVQPPSVDET--VEILRGLKKKYEEHHNVFIT 410 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ + A D A +++ + ++ LE+ + Sbjct: 411 DEALVAAAKLSDQYVHGRFLPDKAID----LLDEAGARVRVNTMGQPSELLRLEAEIEST 466 Query: 388 QAEADMF--QLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 + + + ++A + K L+ +LS +++ + EE Sbjct: 467 KQAKEQAIGTQEYEKAASLRD-----------------EEKKLREKLSNMKQQWESNKEE 509 Query: 446 LK 447 + Sbjct: 510 HQ 511 >AAA_Q9LLI0_289-483_PF00004.17 Length = 195 Score = 147 bits (372), Expect = 6e-34 Identities = 15/147 (10%), Positives = 40/147 (27%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + ++ + + Sbjct: 48 GAKYRGDFEERLKAVLKEVTASNGQIILFIDEIHTVVGAGATSGAMDAGNLLKPMLGRGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ PS+E+ ++ E+ V+ Sbjct: 108 LRCIGATTLNEYRKYIEKDPALERRFQQVFCSQPSVEDTI--SILRGLRERYELHHGVKI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R + A D Sbjct: 166 SDSALVSAAVLADRYITERFLPDKAID 192 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 147 bits (371), Expect = 6e-34 Identities = 14/147 (9%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 48 GAKFRGEFEERLKGVLNDLAKNEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ P++E+ ++ + V+ Sbjct: 108 LHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKEKYALHHGVEI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R + A D Sbjct: 166 TDPAIVAAATLSNRYITDRQLPDKAID 192 >gi|67158353|ref|ZP_00419344.1| AAA ATPase, central region:Clp, N terminal [Azotobacter vinelandii AvOP] Length = 842 Score = 147 bits (371), Expect = 7e-34 Identities = 29/271 (10%), Positives = 69/271 (25%), Gaps = 24/271 (8%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + E +I +D + G + + + Sbjct: 264 EFEQRLKGVIDGVRNAERPVILFIDEAHTLIGAGGAEGGSDAANLLKPALARGELRTLAA 323 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + P + ++ A E V ++ Sbjct: 324 TTWLEYKKYFEKDPALARRFQLVQVEEP--DEATAVEMLRGVAAKLEQHHGVLVLDAAIQ 381 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A A + + + P +E L + + E D Sbjct: 382 DAVKLSHRYISGRQLPDKAISV----LDTACARVALGQHDVPPPLESLRHRQQALKEELD 437 Query: 393 MFQLKADEA--RREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE 450 + + RE ++ + R + E L + Sbjct: 438 RLRREQTTGLDHRERITALEHEAAGNTVAIRELEGRWQEER-EAVRALLEARRELLALSD 496 Query: 451 NSQCDFDPMKMR-----MESEIRGLLKGMEM 476 N+ ++ + +E+ L G+E Sbjct: 497 NADASNSDEELDGRIDHLAAELLRLEAGLEA 527 >AAA_CLPB_200-394_PF00004.17 Length = 195 Score = 147 bits (371), Expect = 7e-34 Identities = 16/147 (10%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ P++E+ ++ EI VQ Sbjct: 108 LHCVGATTLDEYRQYIEKDAALERRFQKVFVGEPTVEDTIA--ILRGLKERYEIHHHVQI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R + A D Sbjct: 166 TDPAIVAAATLSHRYVSDRQLPDKAID 192 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 147 bits (371), Expect = 7e-34 Identities = 16/147 (10%), Positives = 35/147 (23%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + + + Sbjct: 48 GAKFRGDFEERLKSVLREVKDSDGKVILFIDELHLVVGAGNAEGSADAANLLKPELARGA 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ P++E+ ++ E V+ Sbjct: 108 LRCIGATTLDEYRQHIEKDAALERRFQPVFVGEPNVEDTVA--ILRGLKPRYESHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R A D Sbjct: 166 TDSALVAAANLSDRYIADRFLPDKAID 192 >AAA_CLPB2_203-397_PF00004.17 Length = 195 Score = 147 bits (371), Expect = 7e-34 Identities = 16/147 (10%), Positives = 37/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +I +D + + ++ + Sbjct: 48 GAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGA 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQE D P++ + ++ E+ V+ Sbjct: 108 LRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTI--SILRGLKERYEVHHGVKI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 ADSALVAAAMLSNRYISDRFLPDKAID 192 >gi|52003130|gb|AAU23072.1| ATP-dependent Clp protease-like (class III stress gene) ClpE [Bacillus licheniformis ATCC 14580] Length = 698 Score = 147 bits (371), Expect = 7e-34 Identities = 30/266 (11%), Positives = 78/266 (29%), Gaps = 35/266 (13%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + Q + + I +D + + + + + ++I Sbjct: 163 RGQFEERMKQLMKELKERKNAILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIG 222 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P++E ++ E V T ++ Sbjct: 223 ATTLKEYRQIEKDAALERRFQPIMVHEPTIEQAAA--ILNGLKEKYEAYHDVTYTDEAIK 280 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A D L D+A + +LK++ + + L+ I K A Sbjct: 281 ACVILSSRYIQDRHLPDKAID--LLDEAGSKANLKIDTVSGEQASQRLQEIEAEK---AK 335 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR----QYLFEELKA 448 Q + E + + L ++ EE + + + Sbjct: 336 ALQEENYELAAKLRD----------------EEEALHKKMESHEEEKRATVEAEDIQAII 379 Query: 449 QENSQCDFDPMKMRMESEIRGLLKGM 474 ++ + ++ + +++ L + Sbjct: 380 EQKTGIPVGKLQHDDQKKMKELEAHL 405 >gi|15458317|gb|AAK99529.1| ATP dependent protease [Streptococcus pneumoniae R6] Length = 752 Score = 146 bits (370), Expect = 8e-34 Identities = 27/200 (13%), Positives = 61/200 (30%), Gaps = 20/200 (10%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGS-EDARGKKLFWKADELIEKLKSKLI 279 F + + + E +I +D + +I + + + +L+ Sbjct: 204 RGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSASDGNMDAGNILKPALARGELQLV 263 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q D P+++ ++ E VQ T + Sbjct: 264 GATTLNEYRIIEKDAALERRMQPVKVDEPTVDETIT--ILKGIQKKYEDYHHVQYTDAAI 321 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME------RQKKKPQIEELESIVR 385 E A R + A D L D+A + +L + ++ + E L+S Sbjct: 322 EAAATLSNRYIQDRFLPDKAID--LLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKSQAT 379 Query: 386 LKQA-EADMFQLKADEARRE 404 ++ E + +E Sbjct: 380 REEDFEKAAYFRDQIAKYKE 399 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 146 bits (370), Expect = 8e-34 Identities = 16/147 (10%), Positives = 37/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ PS+E+ ++ E+ VQ Sbjct: 108 LHCVGATTLDEYRQYIEKDAALERRFQKVYVAEPSVEDTIA--ILRGLKERYELHHHVQI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R A D Sbjct: 166 TDPAIVAAATLSHRYISDRMLPDKAID 192 >gi|48869834|ref|ZP_00322573.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pediococcus pentosaceus ATCC 25745] Length = 739 Score = 146 bits (370), Expect = 8e-34 Identities = 26/193 (13%), Positives = 58/193 (30%), Gaps = 12/193 (6%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + Q + ++ +D + +I G + + +L+ Sbjct: 201 RGQFEQRMQQLMKEVQANKDMVVFIDEIHEIVGAGNAEGGMDAGNVLKPALARGDFQLVG 260 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + Q D PS E E ++ E V T +E Sbjct: 261 ATTLKEFRDIEKDAALARRLQPVQVDEPSEE--EAIKILKGIQKKYEDYHHVHYTDDAIE 318 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A D L D+A + +L + + ++++ K+A Sbjct: 319 AAVKLSKRYIQDRFLPDKAID--LLDEAGSKKNLTINIADPETIQKKIDEAEAQKKAALQ 376 Query: 393 MFQLKADEARREA 405 + R+ Sbjct: 377 SEDYEKAAYYRDQ 389 >gi|48854713|ref|ZP_00308874.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Cytophaga hutchinsonii] Length = 848 Score = 146 bits (370), Expect = 8e-34 Identities = 27/237 (11%), Positives = 59/237 (24%), Gaps = 29/237 (12%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + I + + + Sbjct: 275 GTKYRGQFEERMKAVMNELEKSPEVILFIDEIHTIVGAGGASGSLDASNMFKPALARGDI 334 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D+ + E ++ E V + Sbjct: 335 QCIGATTLDEYRQYIEKDGALARRFQIVMVDATTPEET--VQILNNIKEKYEDHHNVIYS 392 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D A + + I +LE + Sbjct: 393 PEALEACVKLSDRYISDRFLPDKAIDV----LDEAGARVHINNIHVPADILKLEEQIENI 448 Query: 388 QAEADMFQL--KADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL 442 + E + K +EA + + + +L EE ++ Sbjct: 449 KKEKNKVVKSQKYEEAAQLRD------------SEKKLIEQLDNAKLRWEEETKKKR 493 >AAA_Q5L1U6_202-396_PF00004.17 Length = 195 Score = 146 bits (369), Expect = 1e-33 Identities = 16/147 (10%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I ++ + + Sbjct: 48 GAKFRGEFEERLRAVLNEIKKSEGRIILFIDELHTIVGAGRAEGAIDAGNMLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ P++E+ ++ E+ V+ Sbjct: 108 LRCIGATTLDEYRQYIEKDPALERRFQQVLVQEPTVEDTI--SILRGLKERYEVHHGVKI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 R + A R A D Sbjct: 166 HDRALVAAAVLSDRYISDRFLPDKAID 192 >AAA_CLPB_202-401_PF00004.17 Length = 200 Score = 146 bits (369), Expect = 1e-33 Identities = 21/157 (13%), Positives = 45/157 (28%), Gaps = 14/157 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + L+ + + Sbjct: 48 GAKYRGEFEERLKAVLNEIKSAEGQIITFIDELHTVVGAGASEGSMDASNMLKPLLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 +LI ++ + FQ+ PS+E+ ++ E V+ Sbjct: 108 LRLIGATTLDEYREHIEKDPALERRFQQVYVGEPSVEDTVA--ILRGLRERYEAHHKVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAV 363 T + A+ R + A D L D+A + Sbjct: 166 TDSALVAAAQLSHRYITGRQLPDKAID--LVDEAASR 200 >AAA_Q5FQY4_202-396_PF00004.17 Length = 195 Score = 146 bits (369), Expect = 1e-33 Identities = 14/147 (9%), Positives = 33/147 (22%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + Sbjct: 48 GAKYRGEFEERLKAVLKEIETAEGEIILFIDEMHTLVGAGRSDGAMDASNLIKPELARGT 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ PS+ + ++ E+ V+ Sbjct: 108 LHCVGATTLDEYRKYIEKDAALARRFQPVFVGEPSVADTI--SILRGIKEKYELHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R A D Sbjct: 166 TDNAIVAAATLSNRYITDRFLPDKAID 192 >gi|67935993|ref|ZP_00529008.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Chlorobium phaeobacteroides DSM 266] Length = 854 Score = 146 bits (369), Expect = 1e-33 Identities = 27/240 (11%), Positives = 66/240 (27%), Gaps = 34/240 (14%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + I + + + + Sbjct: 270 GTKYRGQFEERMKALMNELERSRDVILFIDELHTIIGAGGASGSLDASNIFKPALARGEL 329 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ + +++ ++ + E+ V+ + Sbjct: 330 QCIGATTLDEYRQYIEKDGALDRRFQKIMVEPATVDETIL--ILNNIKSKYEVHHHVRYS 387 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D A + + +I ELE + Sbjct: 388 EDAIEKAVKLSERYITDRFLPDKAIDV----MDEAGARVHLSNIHVPDEILELEKSIEAI 443 Query: 388 QAEADMFQLKA--DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 + E + +EA + + K+L L A++ + E Sbjct: 444 KTEKNQVVKMQNFEEAAKLRD-----------------KEKHLLESLDHAKQEWEDRAAE 486 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 146 bits (369), Expect = 1e-33 Identities = 15/147 (10%), Positives = 40/147 (27%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 108 LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTVA--ILRGLKERYELHHHVEI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R + A D Sbjct: 166 TDPAIVAAASLSHRYISDRQLPDKAID 192 >AAA_Q5PA28_202-396_PF00004.17 Length = 195 Score = 146 bits (369), Expect = 1e-33 Identities = 14/147 (9%), Positives = 36/147 (24%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQ-HCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + +I +D + + ++ + + Sbjct: 48 GTKYRGEFEERLKAVITKIVASNGKIILFIDELHMLVGAGATGGSMDASNILKPVLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ P+ + ++ E+ ++ Sbjct: 108 IRCIGATTLDEYREHIEKDPALARRFQPVFVAEPTTGDTI--SILRGLKEKYELHHGIRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R A D Sbjct: 166 TDSAIVAAATLSNRYITDRFLPDKAID 192 >gi|5921798|sp|O78410|CLPC_GUITH ATP-dependent Clp protease ATP-binding subunit clpA homolog Length = 819 Score = 146 bits (369), Expect = 1e-33 Identities = 32/266 (12%), Positives = 72/266 (27%), Gaps = 42/266 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 249 GTKYRGEFEERLKKIIDEIRVANNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEM 308 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + + FQ PS+E ++ E + + Sbjct: 309 QCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETI--EILYGLRDRYEKHHKLVIS 366 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A+ + A D L D A + +++ + P EL+ Sbjct: 367 DEALSAAAKFADQYIADRFLPDKAID--LID--EAGSRVRLMNSQLPPAARELDK----- 417 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 E + DEA R + +LR E E + + Sbjct: 418 --ELREILKQKDEAVRSQDF-----------------ETAGQLRDREME--IKAQIAAIA 456 Query: 448 AQENSQCDF-DPMKMRMESEIRGLLK 472 + + + + E +I ++ Sbjct: 457 HSKKGDEENTKEVSVVTEEDIAQIVA 482 >gi|62734338|gb|AAX96447.1| ATPase, AAA family, putative [Oryza sativa (japonica cultivar-group)] Length = 918 Score = 146 bits (369), Expect = 1e-33 Identities = 26/194 (13%), Positives = 54/194 (27%), Gaps = 20/194 (10%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T + + +I LD V + + + + Sbjct: 353 GTKYRGELEERLKNILEEIKQNGEIILFLDEVHTLVTAGSAEGAIDAANIFKPALARGEL 412 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ +++ G ++ + VQ T Sbjct: 413 QCIGATTINEYRKHIEKDAALERRFQPVKIPESTVDETVG--ILKGLRERYQGHHKVQYT 470 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + AE + + A D L D+A ++ L+ Q K V Sbjct: 471 DEALVAAAELSHKHIRDRFLPDKAID--LMDEAGSIVRLRNA-QCKPS------KKVNDL 521 Query: 388 QAEADMFQLKADEA 401 +AE + ++A Sbjct: 522 EAELKKTLKEKNDA 535 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 146 bits (368), Expect = 1e-33 Identities = 14/147 (9%), Positives = 36/147 (24%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGAMDASNLLKPALARGE 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ D P++E+ ++ E V+ Sbjct: 108 LHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTI--SILRGLKEKYEQHHKVRV 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 SDSALVAAAMLSNRYITDRFLPDKAID 192 >gi|67984753|gb|EAM72758.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Kineococcus radiotolerans SRS30216] Length = 851 Score = 146 bits (368), Expect = 2e-33 Identities = 37/265 (13%), Positives = 73/265 (27%), Gaps = 42/265 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + ++ + + Sbjct: 272 GSRYRGDFEERLRKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGEL 331 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+L + ++ E V T Sbjct: 332 QTIGATTLDEFRKHIEKDPALERRFQPIQVPEPTLAH--AIEILKGLRDRYEAHHRVSIT 389 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R A D L D+A A L++ R P + E + + Sbjct: 390 DAALVAAATLADRYVNDRYLPDKAID--LIDEAGA--RLRIRRMTAPPDLREFDERIAD- 444 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + + A + K LR +E + Q E + Sbjct: 445 ------VRREKESAIDAQDF-----------------EKAASLRDNEKKLLAQK--GERE 479 Query: 448 AQENSQCDFDPMKMRMESEIRGLLK 472 Q S D D + E I +L Sbjct: 480 KQWKSG-DMDVIAEVDEELIAEVLA 503 >gi|37521111|ref|NP_924488.1| endopeptidase Clp ATP-binding chain [Gloeobacter violaceus PCC 7421] Length = 778 Score = 146 bits (368), Expect = 2e-33 Identities = 23/177 (12%), Positives = 54/177 (30%), Gaps = 14/177 (7%) Query: 221 LFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 F + + ++ +D + + G + + + + I Sbjct: 262 RGEFEERLKGVMQEVIASKGQIVLFIDELHTLVGAGASEGGMDAANLLKPALARGELQCI 321 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ PS++ ++ E ++ T Sbjct: 322 GATTLDEYRKHIERDAALERRFQPVTVGEPSVDEAIA--ILQGLKVRYEEHHKLRYTDAA 379 Query: 331 MEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E R A D L D+A ++ +K+ R + P I + E+I ++ Sbjct: 380 LEAAVRLSDRYIADRFLPDKAID--LIDEAGSMIRVKLARGAELPAIVDSEAIAQVL 434 >AAA_CLPB_206-400_PF00004.17 Length = 195 Score = 145 bits (367), Expect = 2e-33 Identities = 15/147 (10%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLKEVEKSEGRIIMFIDELHTIVGAGKTDGAMDASNLLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ D P++E+ ++ E+ V+ Sbjct: 108 LHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPTIED--AISILRGLKERFEVHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + R + A D Sbjct: 166 SDSAIVEAVTLSHRYITDRQLPDKAID 192 >AAA_Q5GTA2_203-397_PF00004.17 Length = 195 Score = 145 bits (367), Expect = 2e-33 Identities = 14/147 (9%), Positives = 36/147 (24%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + +I +D + + + + + + Sbjct: 48 GTKFRGEFEERLKAVINELAKAEGKIILFIDELHTLVGAGATSGAMDASNLLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ P+ + ++ E+ ++ Sbjct: 108 IRCIGATTLDEYREHIEKDPALARRFQPVFISQPTETDT--VSILRGLKERYEVHHGIRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R A D Sbjct: 166 TDGAIIAAAMLSNRYITDRFLPDKAID 192 >AAA_CLPB_197-391_PF00004.17 Length = 195 Score = 145 bits (367), Expect = 2e-33 Identities = 14/147 (9%), Positives = 37/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + +I +D + + + + + + Sbjct: 48 GAKYRGEFEDRLKAVIKEVTSSDGQIILFIDELHTLVGAGKTEGAMDAGQLLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ + PS+E+ ++ E+ ++ Sbjct: 108 LRCIGATTLDEYRKYIEKDAALERRFQTVMVEEPSVED--AITILRGLKEKYEVHHGIRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + + R A D Sbjct: 166 TDAALVSAVKLSHRYITNRFLPDKAID 192 >gi|14495033|emb|CAC42150.1| putative chaperone [Streptomyces coelicolor A3(2)] Length = 837 Score = 145 bits (366), Expect = 2e-33 Identities = 24/197 (12%), Positives = 52/197 (26%), Gaps = 17/197 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + + +I +D + + + + Sbjct: 281 GAQYRGQFEERLKKVIEDVQQARGDIILFIDELHTVVGAGASGESSMDAGNMLKPALARG 340 Query: 275 KS---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + ++ + FQ PS+E ++ E V+ Sbjct: 341 ELHVVGATTIDEYRKYVEKDAALERRFQPVMVPEPSVEET--VQILEGLRDAYEAHHQVR 398 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + AE R A D + D+A A L+ + ++ E + Sbjct: 399 FADGALTAAAELSDRYVSDRFLPDKAID--VMDQAGARVRLR--SASRSTEVVGREDRIA 454 Query: 386 LKQAEADMFQLKADEAR 402 + E + D AR Sbjct: 455 KLRREQEQAVAAEDYAR 471 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 145 bits (366), Expect = 2e-33 Identities = 16/147 (10%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKFRGEFEERLKAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D PS E+ ++ E+ V Sbjct: 108 LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIA--ILRGLKERYEVHHGVSI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A+ R + A D Sbjct: 166 TDGAIIAAAKLSHRYITDRQLPDKAID 192 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 145 bits (366), Expect = 2e-33 Identities = 18/147 (12%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNIVGAGKTEGSMDAGNLLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 LI ++ + FQ+ PS+E+ ++ EI V+ Sbjct: 108 LHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSVEDTI--SILRGLKERFEIHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A+ R A D Sbjct: 166 HDNALVAAAKLSDRYITDRYLPDKALD 192 >gi|48864977|ref|ZP_00318845.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Oenococcus oeni PSU-1] Length = 726 Score = 145 bits (366), Expect = 3e-33 Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 14/194 (7%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + Q + +I +D + +I G + + + +LI Sbjct: 163 RGQFEARMQQLMKEVESRDEVILFIDEIHEIMGAGNAEGGMDAGNILKPALARGEFQLIG 222 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQE + PS E ++ E V+ +E Sbjct: 223 ATTLKEYRNIEKDGAVSRRFQEVMVEEPSR--IEAVEILKGLRPKYEDFHHVKYPDDVLE 280 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A D L D+A + +L +E + +++ + +KQ + Sbjct: 281 TAVDLSDRYIPERFLPDKAID--LIDEAGSRKNLHLEFVSSEEIQQKINNAEAMKQQAIE 338 Query: 393 MFQLKADEARREAE 406 + ++A + Sbjct: 339 --KEDYEKASYWRD 350 >gi|67921848|ref|ZP_00515365.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Crocosphaera watsonii WH 8501] Length = 789 Score = 145 bits (366), Expect = 3e-33 Identities = 24/176 (13%), Positives = 49/176 (27%), Gaps = 13/176 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 255 GTRFRGDFEERLKSIVKQVKESGNIILVIDEIHTLVGAGTMGGVMDAGNLFKPALARGEL 314 Query: 277 KL---------IDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ PS+E ++ E V+ + Sbjct: 315 QCLGTTTLDEYRQHIEKDAALERRFQPVMVGEPSVEETI--EILQGLCKEYEAHHQVKFS 372 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESI 383 + +E A R A D L D+A + L+ Q K E E+ Sbjct: 373 PKALEAAANLGDRYISDRFLPDKAID--LIDEAGSRIHLRHSLQTKMQPSFEAENE 426 >gi|32444984|emb|CAD74986.1| negative regulator of genetic competence ClpC/MecB [Rhodopirellula baltica SH 1] Length = 859 Score = 145 bits (366), Expect = 3e-33 Identities = 35/267 (13%), Positives = 75/267 (28%), Gaps = 42/267 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + I +D + + + + + Sbjct: 269 GTKYRGQFEERIKAVMTEVRRVKNTILFIDELHTLVGAGGAEGAIDAANVLKPALARGEI 328 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ N + FQE P+ + E ++ E VQ T Sbjct: 329 QCIGATTLDEYRKYIEKDNALARRFQEIMV-EPTGK-TETIEILKGLRERYEEHHRVQFT 386 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + E R A D + D+A A L+ + P ++E++ V Sbjct: 387 DDAVVAAVEMSERYITARCLPDKAID--VIDEAGARVRLRT--MTRPPDLKEIDEQV--- 439 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + ++A + K LR + R++ E++ Sbjct: 440 ----ETLNKDKEDAVANQDF-----------------EKAANLRDQAEKLRKKK--EQIT 476 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGM 474 + + + E I ++ M Sbjct: 477 QEWR-EKSQQTDGVVDEEIIAEVVSKM 502 >AAA_Q8X1A0_131-325_PF00004.17 Length = 195 Score = 145 bits (366), Expect = 3e-33 Identities = 15/147 (10%), Positives = 40/147 (27%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCA-PNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 108 LRCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIA--ILRGLKERYEVHHGVKI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A+ R + A D Sbjct: 166 LDSAIIAAAKMSHRYITDRQLPDKAID 192 >AAA_CLPB_201-394_PF00004.17 Length = 194 Score = 145 bits (365), Expect = 3e-33 Identities = 17/146 (11%), Positives = 34/146 (23%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + +I +D + I + + + Sbjct: 48 GAKYRGEFEERLKNVVDEVKKAGNIILFIDEIHTIVGAGASEGSMDAANILKPALARGEL 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I + + FQ + + PS+ E ++ E V T Sbjct: 108 HTIGATTLKEYRKYFEKDAALTRRFQPINVNEPSIN--EALQILRGIKPNLEAHHNVNIT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + A+ R A D Sbjct: 166 DAALVAAAKLSSRYITDRFLPDKAID 191 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 145 bits (365), Expect = 3e-33 Identities = 17/147 (11%), Positives = 37/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVF-QHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D + +D + + + + + + Sbjct: 48 GAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ PS+E+ ++ EI + Sbjct: 108 LHCIGATTLDEYRQYIEKDAALERRFQKVLVGEPSVEDTIA--ILRGLQERYEIHHGIDI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + AE R A D Sbjct: 166 TDPAIVAAAELSDRYITDRFLPDKAID 192 >gi|23025097|ref|ZP_00064272.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 826 Score = 145 bits (365), Expect = 3e-33 Identities = 34/268 (12%), Positives = 77/268 (28%), Gaps = 41/268 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + ++ +I +D + + + + + Sbjct: 256 GTKYRGEFEDRLKKIIEEIYNDGEVILFIDELHTLIGAGGAEGAIDASNILKPALARGEL 315 Query: 277 ---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + +++ + F D P+ ++ ++ + E VQ Sbjct: 316 QTLGATTFDEYQKYVESDAALERRFASVTVDEPTQDDAIA--ILKGIRSHFEKHHQVQID 373 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D L D+A A ++++ K I + + Sbjct: 374 DAAIEAAVKLSARYISDRFLPDKAID--LMDEAGAK--VRIDATGKATPISKAKVRFAEV 429 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 QAE + D K +LR E + +++ E K Sbjct: 430 QAEKEAAITSLD------------------------FEKAAQLRTEEMKLKQKLAKSEAK 465 Query: 448 AQENSQCDFDP--MKMRMESEIRGLLKG 473 +N+Q + E +I ++ Sbjct: 466 DTQNNQKENAERYSLHVTEEDIAEVISQ 493 >gi|58336963|ref|YP_193548.1| ATP-dependent Clp protease, ATP-binding subunit [Lactobacillus acidophilus NCFM] Length = 728 Score = 145 bits (365), Expect = 4e-33 Identities = 34/269 (12%), Positives = 90/269 (33%), Gaps = 38/269 (14%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + Q + +I +D + +I G + + + +L+ Sbjct: 190 RGQFEQRMEQLIRELQQNDDIILFIDEIHEIVGAGNAEGGMDAGNIIKPALARGELQLVG 249 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + + FQ + PS++ ++ E VQ + +E Sbjct: 250 ATTIKEYRDIEKDSALARRFQPVEVKEPSIDETI--RILKGIQQRYEDYHHVQYSDDSIE 307 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A D L D+A + +L + K E + + +LK+ + Sbjct: 308 SAVKLSARYIQDRFLPDKAID--LLDEAGSRMNLTIPYIDKGKMQERINAAEQLKE---E 362 Query: 393 MFQLK-ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR-----QYLFEEL 446 + + ++A + KY K++ + + + + ++ Sbjct: 363 SLKNEDYEKAAYYRD----------------QIEKYEKMKDQKVDPDKSPIITDKIMNKI 406 Query: 447 KAQENSQCDFDPMKMRMESEIRGLLKGME 475 ++ D K + E++++ L ++ Sbjct: 407 VEEKTGIPVGDIQK-QEENQLQNLASDLK 434 >gi|68549442|ref|ZP_00588906.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Pelodictyon phaeoclathratiforme BU-1] Length = 846 Score = 144 bits (364), Expect = 4e-33 Identities = 25/201 (12%), Positives = 57/201 (28%), Gaps = 17/201 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + I + + + + Sbjct: 270 GTKYRGQFEERMKALMNELERSRDVILFIDELHTIVGAGGASGSLDASNIFKPALARGEL 329 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ + S++ ++ + E+ V + Sbjct: 330 QCIGATTLDEYRQFIEKDGALDRRFQKIMVEPTSVDETI--QILNNIKSKYEVHHHVNYS 387 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D A + + +I ELE + Sbjct: 388 GDSIEKAVKLSERYITDRFLPDKAIDV----MDEAGARVHLSNIHVPAEILELEKSIEEI 443 Query: 388 QAEADMFQLKA--DEARREAE 406 +AE + +EA R + Sbjct: 444 KAEKNQVVKMQNFEEAARLRD 464 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 144 bits (364), Expect = 5e-33 Identities = 18/147 (12%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLNEVKKADGQIILFIDELHTIVGAGKTEGSMDAGNLLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 LI ++ + FQ+ P++E+ ++ C EI V Sbjct: 108 LHLIGATTLDEYRKYMETDKALERRFQKVLVTEPTVEDTI--SILRGLKECFEIHHGVTI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 HDNALVAAATLSNRYITDRFLPDKAID 192 >gi|67640681|ref|ZP_00439479.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Burkholderia mallei GB8 horse 4] Length = 897 Score = 144 bits (364), Expect = 5e-33 Identities = 31/268 (11%), Positives = 61/268 (22%), Gaps = 25/268 (9%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + +I +D I A + + + Sbjct: 291 EFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAA 350 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + PS ++ A E V+ + Sbjct: 351 TTWSEYKKYFEKDAALARRFQVVKIEEPS--EPLAAAMLRGMAALMERHFNVRVLDDAIT 408 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A A + + I++ + + AE Sbjct: 409 EAVRLSHRYISGRQLPDKAISV----LDTACAKVALAHSSTPAAIDDAKKRIERIDAEIA 464 Query: 393 MFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE 450 + +A A ++Y + R E L EL A Sbjct: 465 ALEREAASGAAHDARLAELREARDADLKALAEDAARYEEERALVTE--IGALRAELDAAR 522 Query: 451 NSQCDF-----DPMKMRMESEIRGLLKG 473 S D D + ++ + L Sbjct: 523 ESSADGKPVDVDATRAKLAERVDALRAR 550 >gi|15606774|ref|NP_214154.1| ATPase subunit of ATP-dependent protease [Aquifex aeolicus VF5] Length = 1006 Score = 144 bits (363), Expect = 5e-33 Identities = 29/255 (11%), Positives = 74/255 (29%), Gaps = 16/255 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + + + + Sbjct: 382 GSKYRGEFEERLKALLDEVKEKGNVILFIDEIHTVVGAGAAEGAVDAANIMKPALARGEI 441 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 ++I ++ + FQ D P+ E ++ E V+ + Sbjct: 442 RVIGATTVDEYRKYIEKDPALERRFQPVFVDEPTEEQTI--EILKGLRPRLEQFHKVKIS 499 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R R A D A K++ P+I+E+E ++ Sbjct: 500 DEAIEAAVKLTKRYVTFRRLPDKAID----ALDQAAARKKLKVIGTPPEIQEIERKIKAL 555 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + LK D + +++E +++ + L E++K Sbjct: 556 EEQIIEANLKGDYEKEAQLKIEKAKLEKEKQELLGKVGGVEA-KIAELKKKIEELDEKIK 614 Query: 448 AQENSQCDFDPMKMR 462 +++ Sbjct: 615 EAAEKGDYEKEAELK 629 >gi|54307876|ref|YP_128896.1| putative ATPase with chaperone activity [Photobacterium profundum SS9] Length = 914 Score = 144 bits (363), Expect = 5e-33 Identities = 30/260 (11%), Positives = 70/260 (26%), Gaps = 27/260 (10%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + +I +D + A + + + Sbjct: 322 EFENRLKSVVSEVKNSPVPIIIFIDEAHAMVGSGGQAGQSDAANILKPALARGELRTIAA 381 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + PS ++ E V T + ++ Sbjct: 382 TTWAEYKKYFEKDAALARRFQVVKVEEPS--EDLAVVMLRGLLPVMEAHHQVTITDQALQ 439 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A L D ACA + M + +IE L + +AE Sbjct: 440 AAVRLSHRYISGRQLPDKAVG--LLDTACA--RVAMSQATAPAKIEALNKYQQQLEAEII 495 Query: 393 MFQLKADEA--RREAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELKA 448 + + +E Y + + + ++ A+ + E ++ Sbjct: 496 QLEKEQKTGGDHQERLHNLQCELDTTATDLQAYQALWQQECVLINRAKALSTAVLESIE- 554 Query: 449 QENSQCDFDPMKMRMESEIR 468 D +E +++ Sbjct: 555 ------PIDEQAELIEIKLQ 568 >AAA_CLPB_203-397_PF00004.17 Length = 195 Score = 144 bits (363), Expect = 5e-33 Identities = 14/147 (9%), Positives = 35/147 (23%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + Sbjct: 48 GAKYRGEFEERLKAVIREVAKSEGKVILFIDELHTLVGAGAAEGAMDASNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ + PS+E+ ++ E ++ Sbjct: 108 LHCIGATTLNEYRKYIEKDAALERRFQQVYTGEPSVEDTIA--ILRGLKEKYENYHGIRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 KDSAIIAAATLSDRYITDRFLPDKAID 192 >gi|23480959|gb|EAA17380.1| clpB protein [Plasmodium yoelii yoelii] Length = 909 Score = 144 bits (363), Expect = 6e-33 Identities = 39/269 (14%), Positives = 82/269 (30%), Gaps = 18/269 (6%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 TS F + +I +D + + + G ++ K + Sbjct: 280 GTSYRGEFENRMKNIIKELKNKKNKIILFVDEIHLLLGAGKAEGGVDAANLLKPVLSKGE 339 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 KLI +++C+ F++ + PS+E ++ + E + Sbjct: 340 IKLIGATTVTEYRKYIESCSAFERRFEKVIVEPPSVE--TAIKILRSLKSKYEKFYGINI 397 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + + + + K A D L +KAC+ L+++ K I+ E + Sbjct: 398 TDKALVAAVKVSDKFIKDRFLPDKAID--LLNKACSF--LQVQLSGKPRVIDLTERYIER 453 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKY--LKLRLSEAEERRQYLFE 444 E + D+ ++ Y +Y RL +E + L E Sbjct: 454 LAYEISTLERDVDKVSKKKYSSLVEEFELKKEELKKYYEEYVTTGERLKRKKEVEKKLNE 513 Query: 445 ELKAQENSQCDFDPMKMRMESEIRGLLKG 473 +N ++ + K Sbjct: 514 LKDIAQNYINAGQEPPTELQESLNEAQKQ 542 >AAA_Q5NYD0_201-395_PF00004.17 Length = 195 Score = 144 bits (363), Expect = 6e-33 Identities = 18/147 (12%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVLKEIAQEEGRIIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ+ D PS+E+ ++ E+ V Sbjct: 108 LHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVESTIA--ILRGLQEKYELHHGVDI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + AE R A D Sbjct: 166 TDPAIVAAAELSHRYITDRFLPDKAID 192 >AAA_Q68XR2_202-396_PF00004.17 Length = 195 Score = 143 bits (362), Expect = 7e-33 Identities = 16/147 (10%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F K + + + +I +D + + + ++ + + Sbjct: 48 GAQYRGEFEKRLKSVLSEIKESSGEIILFIDELHLLVGTGKVEGAMDASNLLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ PS+E+ ++ E+ V+ Sbjct: 108 LHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTI--SILRGIKEKYELHHAVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 SDSAIVAAATLSNRYITDRYLPDKAID 192 >AAA_Q6G134_202-396_PF00004.17 Length = 195 Score = 143 bits (362), Expect = 7e-33 Identities = 14/147 (9%), Positives = 35/147 (23%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + A + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVLAEVQAENGQIILFIDELHNLVGAGKSDGPMDASNLLKPALARGE 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ P+L++ ++ E V+ Sbjct: 108 LHCVGATTLDEYRKYVEKDAALARRFQPVFVPEPTLDDTI--SILRGIKEKYEQHHKVRL 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 ADSALIAAARLSNRYITDRFLPDKAID 192 >AAA_Q5QTU7_201-395_PF00004.17 Length = 195 Score = 143 bits (362), Expect = 7e-33 Identities = 14/147 (9%), Positives = 40/147 (27%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 48 GAKFRGEFEERLKAVLTELSKEEGRIILFIDEMHTMVGAGKADGAMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ + P++E+ ++ E+ V+ Sbjct: 108 LHCVGATTLDEYRQYIEKDAALERRFQKVLVEEPNVEDTIA--ILRGLKERYELHHSVEI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R + A D Sbjct: 166 TDPAIVAAASLSHRYISDRKLPDKAID 192 >gi|4980695|gb|AAD35290.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga maritima MSB8] Length = 820 Score = 143 bits (362), Expect = 7e-33 Identities = 28/198 (14%), Positives = 57/198 (28%), Gaps = 17/198 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F K + + + +I +D + I + + + Sbjct: 253 GTKYRGEFEKRMKKLLQIVTKDKNIILFIDEIHTIVGAGSAEGAIDAANILKPALARGEI 312 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I ++ + FQ+ P+ E ++ E V T Sbjct: 313 SCIGATTPDEYRRYIEKDAALERRFQKIYVKEPTEEETL--EILKGLKRKYEAHHKVIYT 370 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEE--LESIVR 385 + +E R A D + D+A A LK+ P++++ LE Sbjct: 371 DKALEAAVYLSKRYITDHYLPDKAID--VIDEAGARARLKVFV--LPPELKDMKLELERI 426 Query: 386 LKQAEADMFQLKADEARR 403 E + ++A + Sbjct: 427 RSDKELAVLNQDYEKAAQ 444 >AAA_CLPB_199-393_PF00004.17 Length = 195 Score = 143 bits (362), Expect = 8e-33 Identities = 14/147 (9%), Positives = 40/147 (27%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + ++ + + Sbjct: 48 GAKYRGEFEERIKNVLKKVKSSEGKIILFIDEIHTVVGAGATGGSLDASNLLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ ++PS+++ ++ E+ V+ Sbjct: 108 LRCIGATTINEHKQNIEKDPALERRFQKIKINAPSVDDTI--SILRGLREKYEVHHSVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 SDNALVAAASLSERYINDRFLPDKAID 192 >AAA_Q7NIW8_202-395_PF00004.17 Length = 194 Score = 143 bits (362), Expect = 8e-33 Identities = 14/146 (9%), Positives = 37/146 (25%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + ++ +D V + + + + Sbjct: 48 GTKYRGEFEERLKKIMDEIRAAGNVVLVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+++ ++ E ++ T Sbjct: 108 QCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDETI--EILRGLRERYEQHHKLKIT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + A+ R A D Sbjct: 166 DEALIAAAQLSDRYISDRYLPDKAID 191 >AAA_CLPB_202-396_PF00004.17 Length = 195 Score = 143 bits (362), Expect = 8e-33 Identities = 14/147 (9%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + + +I +D + + + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLSEIKESSGEIILFIDELHLLVGTGKTDGAMDASNLLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ P++E+ ++ E+ V+ Sbjct: 108 LHCIGATTLDEYRKYIEKDAALARRFQPVYVSEPTVEDTI--SILRGIKEKYELHHAVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 SDSAIVAAATLSNRYITDRYLPDKAID 192 >gi|28869739|ref|NP_792358.1| clpB protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 867 Score = 143 bits (362), Expect = 8e-33 Identities = 36/269 (13%), Positives = 73/269 (27%), Gaps = 23/269 (8%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + I +D + +A G + + + Sbjct: 259 EFERRLKGVIDEVKSSPGSFILFIDEAHTLIGAGANAGGSDAANILKPALARGELRTIAA 318 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ P++E ++ E + V + Sbjct: 319 TTWAEYRQYFEKDPALARRFQPVRVLEPTVEQ--AVTILRGLAPLYEQSHGVYLRDDAVV 376 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R + A D L D ACA +++ ++E L S + +Q + Sbjct: 377 AAARLSARYISGRQLPDKAID--LLDTACA--RVQISLVAVPERLEHLRSEMVQQQRHLE 432 Query: 393 MFQLKADEA---RREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFEELKA 448 Q AD + +L R + + K Sbjct: 433 AVQRDADAGLSVDDKVLSTLASSVSRIRKEAIVLEDAWLDQRKTARRVLDLRQQLAHRKI 492 Query: 449 QENSQCDFD---PMKMRMESEIRGLLKGM 474 Q+N+ D +ESE+ + + Sbjct: 493 QQNALTTLDSDCQATQALESELAQAQQTI 521 >gi|16078434|ref|NP_389253.1| ATP-dependent Clp protease-like (class III stress gene) [Bacillus subtilis subsp. subtilis str. 168] Length = 699 Score = 143 bits (361), Expect = 9e-33 Identities = 26/263 (9%), Positives = 72/263 (27%), Gaps = 29/263 (11%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + Q + + +I +D + + + + + ++I Sbjct: 165 RGQFEERMKQLITELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIG 224 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ PS+E ++ E V + ++ Sbjct: 225 ATTLKEYRQIEKDAALERRFQPVMVQEPSIEQ--AILILQGIKDKYEAYHGVTFSDEAIK 282 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA- 391 R + A D L D+A + +L ++ E+ + +AE Sbjct: 283 ACVTLSSRYIQDRHLPDKAID--LLDEAGSKANLLIDELND----EDAAERLTAIEAEKT 336 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQEN 451 + + E + + E E++ Sbjct: 337 KALEEENYELAAKLRDEELALEKKLNSSSAHTAVTVEAEHIQEIVEQK------------ 384 Query: 452 SQCDFDPMKMRMESEIRGLLKGM 474 + ++ +++++ L + Sbjct: 385 TGIPVGKLQADEQTKMKELEAKL 407 >gi|22125435|ref|NP_668858.1| putative Clp ATPase [Yersinia pestis KIM] Length = 916 Score = 143 bits (361), Expect = 1e-32 Identities = 32/274 (11%), Positives = 74/274 (27%), Gaps = 29/274 (10%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + E +I +D V + +A + + + + I Sbjct: 309 EFEARLKSVLDEAIAAEKPVILFIDEVHTLIGAGGNAGTGDAANLLKPALARGQLRTIGA 368 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D P + ++ E V ++ Sbjct: 369 TTWSEFKRHIEKDPALTRRFQVLQVDEP--DENTAISMLRGLIPALEKHHGVWIMDEALQ 426 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A L D ACA + + + + +++ L Q E Sbjct: 427 AAVRLSHRYIPARQLPDKAIS--LLDTACA--RIAVAQFSQPIELQHLTFQSETAQTELV 482 Query: 393 MFQL-----KADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSE-----AEERRQYL 442 + KA +AR E ++ R L Sbjct: 483 SLEKARHFGKAQDARTEQL---KTSIAEHGEAADKLDQRWQAERELVSAITTIRTALYDL 539 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGMEM 476 + + E + + +++E+++ + + + Sbjct: 540 VSQPEPDEEKRRAYQAQLVQLEAQLSQVRTSLPL 573 >AAA_CLPB_205-399_PF00004.17 Length = 195 Score = 143 bits (361), Expect = 1e-32 Identities = 17/147 (11%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + I + ++ + + Sbjct: 48 GAKFRGEFEERLKAVLKEVENSQGKIILFIDEIHNIVGAGKTEGSMDAGNLIKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 I ++ + FQ D P++E+ +I EI ++ Sbjct: 108 LNCIGATTFDEYRKYIEKDKALERRFQPVIIDEPTVEDTI--SIIRGLKERFEIHHGIRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A+ R A D Sbjct: 166 HDSAIVAAAKLSQRYITDRYLPDKAID 192 >AAA_CLPB_204-397_PF00004.17 Length = 194 Score = 143 bits (361), Expect = 1e-32 Identities = 16/146 (10%), Positives = 37/146 (25%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + I +D + + + + + + Sbjct: 48 GTKYRGEFEERFKKVLYAVSKDNNTILFIDELHVMVGAGKTDGSMDASNMIKPKLARGEL 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ+ P++EN ++ E+ V T Sbjct: 108 HCVGATTLDEYSRYIEKDAALERRFQKIFIIEPNIENTIA--ILRGLKERYELHHNVHIT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + A R + A D Sbjct: 166 DPAIVAAATLSNRYISDRQLPDKAID 191 >AAA_Q9KGG2_205-398_PF00004.17 Length = 194 Score = 143 bits (361), Expect = 1e-32 Identities = 18/146 (12%), Positives = 38/146 (26%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 48 GTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNILKPSLARGEL 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ + PSL+ E ++ E V T Sbjct: 108 QCIGATTLDEYRKYIEKDAALERRFQPIQVNEPSLD--ESIQILKGLRDRYEAHHRVTIT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 +E + R + A D Sbjct: 166 DEAIEEAVKLSDRYIQDRFLPDKAID 191 >gi|73539083|ref|YP_299450.1| AAA ATPase, central region:Clp, N terminal:Phosphopantetheine attachment site [Ralstonia eutropha JMP134] Length = 913 Score = 143 bits (360), Expect = 1e-32 Identities = 27/252 (10%), Positives = 60/252 (23%), Gaps = 40/252 (15%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + ++ +D + +A G + + + Sbjct: 308 EFEQRLKNVIEAVQQSSTPILLFIDEAHTLIGAGNNAGGADAANLLKPALARGELRTIAA 367 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ D P ++ ++ V T + Sbjct: 368 TTWSEYKQYFERDAALERRFQMVKVDEP--DDEGACLMVRGLKERYAQHHGVHITDAAVA 425 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A D A ++M ++ I E+ + E Sbjct: 426 AAVRLSRRYLTGRQLPDKAVD----LLDTAAARVRMSQEATPVAISACEAERAALEVERT 481 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENS 452 + T RL+ +ER L + + E S Sbjct: 482 ALRQDQ-----------------------GATGTSDAERLAAIDERLASLDAQHEELERS 518 Query: 453 QCDF-DPMKMRM 463 + D + + Sbjct: 519 FAEQKDSAQALL 530 >gi|76165587|gb|EAO59719.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chloroflexus aurantiacus J-10-fl] Length = 826 Score = 143 bits (360), Expect = 1e-32 Identities = 22/193 (11%), Positives = 53/193 (27%), Gaps = 16/193 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 + F + + +I +D + + + + + Sbjct: 252 GSKFRGEFEERLKAVMDEVRNAKGRIILFIDELHTVVGAGAATGSIDASNMLKPALSRGE 311 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 ++I + + F + P E ++ E + Sbjct: 312 IQVIGATTIDEYRKHVEKDAALERRFSPVFVEEPDPETT--VEMLRGLRKRYEEHHQLTI 369 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + + + R A D L D+A A L+++ P+++ E + Sbjct: 370 SDEALRAAVQLSSRYINDRFLPDKAID--LIDEASAK--LRIDIFSMPPELKAKEEELTR 425 Query: 387 KQAEADMFQLKAD 399 QAE + + D Sbjct: 426 LQAEEEEAGARRD 438 >gi|28377823|ref|NP_784715.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Lactobacillus plantarum WCFS1] Length = 837 Score = 143 bits (360), Expect = 1e-32 Identities = 19/203 (9%), Positives = 57/203 (28%), Gaps = 19/203 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + ++ +I +D + + + + + Sbjct: 259 GTKYRGEFEDRLKKVIDEIYNDGHVILFIDELHTLIGAGGAEGAIDASNILKPALARGEL 318 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I +++ + F + P+ E ++ E V T Sbjct: 319 QTIGATTLNEYQKYIESDAALERRFATVMVNEPT--EDEAVEILDGLRPRYEEHHRVTIT 376 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ + R A D L D A +++++ + ++ + + + Sbjct: 377 DEAVDQAVKLSSRYISDRFLPDKAID--LMD--EAAAKVRIDQMDQPTKLSKNQDKLAQL 432 Query: 388 ----QAEADMFQLKADEARREAE 406 + + + R+ E Sbjct: 433 REDKETAIEAQDFEQAADIRKQE 455 >gi|53713701|ref|YP_099693.1| ATP-dependent Clp protease [Bacteroides fragilis YCH46] Length = 844 Score = 143 bits (360), Expect = 1e-32 Identities = 30/267 (11%), Positives = 70/267 (26%), Gaps = 42/267 (15%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + I A + + + Sbjct: 280 GTKYRGQFEERIRSILNELQKNPNVILFIDEIHTIVGAGSAAGSMDAANMLKPALARGEI 339 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ + +++ ++ E V T Sbjct: 340 QCIGATTLDEYRKNIEKDGALERRFQKVMVEPTTVDETL--QILRNIKDKYEDHHNVNYT 397 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D A + + + +IE+ E ++ Sbjct: 398 DAALEACVKLTDRYITDRNFPDKAID----ALDEAGSRVHLTNVSVPKEIEDQEKLI--- 450 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + + +EA + L + E+ + +K Sbjct: 451 ----EEAKNNKNEAVKSQNF-------------------ELAASFRDKEKELAVQLDVMK 487 Query: 448 AQENSQCDFDPMKMRMESEIRGLLKGM 474 + D + E EI ++ M Sbjct: 488 KDWE-ERLKDNRETVDEEEIANVVSMM 513 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 142 bits (359), Expect = 2e-32 Identities = 15/147 (10%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ + PS E+ ++ E+ V Sbjct: 108 LHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIA--ILRGLKERYEVHHKVAI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A+ R + A D Sbjct: 166 TDGAIIAAAKLSHRYITDRQLPDKAID 192 >gi|21673032|ref|NP_661097.1| ATP-dependent Clp protease, ATP-binding subunit ClpC [Chlorobium tepidum TLS] Length = 854 Score = 142 bits (359), Expect = 2e-32 Identities = 25/201 (12%), Positives = 55/201 (27%), Gaps = 17/201 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + I + + + + Sbjct: 272 GTKYRGQFEERMKALMNELERSRDVILFIDELHTIIGAGGASGSLDASNIFKPALARGEL 331 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ + S+E ++ E V + Sbjct: 332 QCIGATTLDEYRQYIEKDGALDRRFQKIMVEPTSVEETI--QILNNIKNKYEAHHHVHYS 389 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D A + + +I ELE + Sbjct: 390 EDAIEKAVKLSERYITDRFLPDKAIDV----MDEAGARVHLSNIHVPQEILELEKSIEEI 445 Query: 388 QAEADMFQLKA--DEARREAE 406 ++E + +EA R + Sbjct: 446 KSEKNKVVKMQNFEEAARLRD 466 >gi|67918278|ref|ZP_00511878.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Chlorobium limicola DSM 245] Length = 849 Score = 142 bits (359), Expect = 2e-32 Identities = 29/240 (12%), Positives = 65/240 (27%), Gaps = 34/240 (14%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + I + + + + Sbjct: 270 GTKYRGQFEERMKALMNELERSRDVILFIDELHTIVGAGGASGSLDASNIFKPALARGEL 329 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ + S++ ++ + E VQ + Sbjct: 330 QCIGATTLDEYRQYIEKDGALDRRFQKIMVEPASVDETI--QILNNIKSKYESHHHVQYS 387 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D A + + +I +LE + Sbjct: 388 EDAIEKAVKLSERYITDRFLPDKAIDV----MDEAGARVHLSNIHVPVEILDLEKSIEEI 443 Query: 388 QAEADMFQLKA--DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 +AE + +EA + K+L L A++ + E Sbjct: 444 KAEKNQVVKMQNFEEAATLRD-----------------KEKHLLEALDHAKQEWEERASE 486 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 142 bits (359), Expect = 2e-32 Identities = 14/147 (9%), Positives = 37/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + Sbjct: 48 GAKFRGEFEERLKAVISEVQKSEGRVILFIDELHTLVGAGASEGSMDASNLLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ P++E+ ++ E+ V+ Sbjct: 108 LRAIGATTLNEYRKYIEKDAALERRFQQVYCPEPTVEDTIA--ILRGLQEKYEVHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 RDEALIAAAVLSNRYITNRFLPDKAID 192 >gi|71736516|ref|YP_272439.1| ATP-dependent Clp protease ATP-binding subunit [Pseudomonas syringae pv. phaseolicola 1448A] Length = 867 Score = 142 bits (359), Expect = 2e-32 Identities = 25/258 (9%), Positives = 64/258 (24%), Gaps = 24/258 (9%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + +I +D + A + + + Sbjct: 276 EFENRLKSVIEETKRSLHPIILFIDEAHTLIGSGGQAGQNDAANLLKPALARGELRTIAA 335 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + P + + ++ A + V + Sbjct: 336 TTWAEYKKYFEKDAALARRFQVVKVEEP--DEDKAIHMLRGLLAKMQEHHKVTVMDEALV 393 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A A + + + + +E+ + + AE Sbjct: 394 QAVRLSNRYITGRQLPDKAVSV----LDTACARVALGQSAQPGALEDCKRHIDNLNAEIT 449 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENS 452 + + + + A + + L + +R L E+L A Sbjct: 450 VLEQETAKGSDHARRLTALHEELK-------AEQETRESLEQQWKRELELVEKLGALSVP 502 Query: 453 QCDFDPMKMRMESEIRGL 470 + D P ++ + L Sbjct: 503 E-DGAPDAEQIAAVRAEL 519 >AAA_CLPB2_204-398_PF00004.17 Length = 195 Score = 142 bits (358), Expect = 2e-32 Identities = 19/147 (12%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + +I +D + + + + + Sbjct: 48 GTKFRGEFEERLKALVKEVQASDGEVILFIDELHLLVGAGSAEGSMDAANILKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ D PS+E+ ++ EI V+ Sbjct: 108 LRCIGATTLDEYRKHIEKDAALERRFQTVIVDQPSVEDT--VSILRGLKEKYEIHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + AE R A D Sbjct: 166 KDAALVAAAELSNRYIADRFLPDKAID 192 >AAA_CLPB_202-397_PF00004.17 Length = 196 Score = 142 bits (358), Expect = 2e-32 Identities = 18/148 (12%), Positives = 40/148 (27%), Gaps = 13/148 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + ++ +D + I L+ + Sbjct: 48 GAKYRGEFEERLKAVLDEIKGANGEIVTFIDELHTIVGAGASGESAMDAGNMIKPLLARG 107 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + +L+ ++ + FQ+ PS+E+ G ++ E+ V+ Sbjct: 108 ELRLVGATTLNEYRKYIEKDTALERRFQQVYVGEPSVEDTVG--ILRGLKERYEVHHGVR 165 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACD 353 + AE R A D Sbjct: 166 IQDSALVAAAELSHRYITSRFLPDKAID 193 >AAA_Q97EC4_207-400_PF00004.17 Length = 194 Score = 142 bits (358), Expect = 2e-32 Identities = 19/146 (13%), Positives = 39/146 (26%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + + +I +D + I + + + Sbjct: 48 GSKYRGEFEERLKKVMTEIKAAKNVILFIDEIHTIVGAGGAEGAIDASNILKPSLARGEI 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ D PS E E ++ E V+ T Sbjct: 108 QCIGATTTEEYRRYIEKDAALERRFQPVDVGEPSKE--EAVQILEGLRDKYEAHHGVKIT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 +E R + A D Sbjct: 166 DDAIEAAVNLSTRYIQDRFLPDKAID 191 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 142 bits (358), Expect = 2e-32 Identities = 17/147 (11%), Positives = 36/147 (24%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKAVLKELAQDEGRTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + FQ+ D P +E ++ E+ V+ Sbjct: 108 LHCVGATTLDEYRKYVEKDAALERRFQKVLVDEPGVEATIA--ILRGLQEKYELHHGVEI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + AE R A D Sbjct: 166 TDPAIVAAAELSHRYITDRFLPDKAID 192 >AAA_O77222_210-405_PF00004.17 Length = 196 Score = 142 bits (358), Expect = 2e-32 Identities = 14/148 (9%), Positives = 38/148 (25%), Gaps = 13/148 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKL 274 F + + D ++ +D + + ++ + Sbjct: 48 GAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLARG 107 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + I ++ + FQ+ + PS++ ++ E+ V+ Sbjct: 108 ELRCIGATTVSEYRQFIEKDKALERRFQQILVEQPSVDETI--SILRGLKERYEVHHGVR 165 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 ILDSALVQAAVLSDRYISYRFLPDKAID 193 >gi|34499124|ref|NP_903339.1| ATP-dependent Clp protease, ATP-binding subunit [Chromobacterium violaceum ATCC 12472] Length = 760 Score = 141 bits (357), Expect = 3e-32 Identities = 33/182 (18%), Positives = 54/182 (29%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F + + D I +D + + + G + Sbjct: 261 GTKYRGDFEQRLKAVIKQLTDDTNAILFIDEIHTLIGAGAASGGTLDASNLLKPALSNGS 320 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + N + FQ+ D P++E ++ + E V+ Sbjct: 321 LRCIGATTYNEYRGIFEKDNALSRRFQKIDVTEPTVEQT--VEILKGLKSRFEAHHGVKY 378 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD-LKMERQKKKPQIEELESIVR 385 T + AE R A D + D+A A L RQKK E+E IV Sbjct: 379 TQSALSTAAELSARYINDRHLPDKAID--VIDEAGAAQKILPKSRQKKVINKSEIEEIVA 436 Query: 386 LK 387 Sbjct: 437 KI 438 >gi|48733621|ref|ZP_00267364.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pseudomonas fluorescens PfO-1] Length = 846 Score = 141 bits (357), Expect = 3e-32 Identities = 29/271 (10%), Positives = 70/271 (25%), Gaps = 24/271 (8%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + +I +D + G + + + Sbjct: 268 EFEQRLKGVIDTVRSADKPIILFIDEAHTLIGAGGTEGGSDAANLLKPALARGELRTLAA 327 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + P + ++ A E VQ + Sbjct: 328 TTWMEYKKYFEKDPALARRFQLVQVEEP--DEITAVEMLRGVAAKLEQHHGVQVLDAAIH 385 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A A + + + P +E L + + E + Sbjct: 386 EAVKLSHRYISGRQLPDKAISV----LDTACARVALGQHDVPPPLESLRHRQQSLKEEVE 441 Query: 393 MFQLKADEA--RREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE 450 + + RE +++ + R+ E E L E Sbjct: 442 RLRREQATGLDHRERITLLESESKTNVQAIRELETRWSEERV-AVRELLDTRRELLALSE 500 Query: 451 NSQCDFDPMKMR-----MESEIRGLLKGMEM 476 ++ D + + +E+ L G++ Sbjct: 501 SADSDKPDEAIDSRIDHLAAELLRLEAGLDA 531 >gi|74317255|ref|YP_314995.1| ATP-dependent Clp protease, ATP-binding subunit [Thiobacillus denitrificans ATCC 25259] Length = 750 Score = 141 bits (357), Expect = 3e-32 Identities = 27/185 (14%), Positives = 57/185 (30%), Gaps = 18/185 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F + + D I +D + + + G + + Sbjct: 255 GTKYRGDFEQRLKGVLKQLADNPKAILFIDEIHTLIGAGAASGGTLDASNLLKPALSSGQ 314 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + + FQ+ D PS+ ++ + E V+ Sbjct: 315 LRCIGATTYTEYRGIFEKDHALSRRFQKVDVPEPSVNETVA--ILRGLKSRFEDHHGVKY 372 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKK----KPQIEELES 382 TA + A+ R A D + D+A A + + +++ +IEE+ S Sbjct: 373 TAAALSTAAQLAARYINDRHLPDKAID--VIDEAGAAQRILPKSKQRRVITPREIEEIIS 430 Query: 383 IVRLK 387 + Sbjct: 431 KIARI 435 >AAA_CLPB2_206-400_PF00004.17 Length = 195 Score = 141 bits (357), Expect = 3e-32 Identities = 15/147 (10%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + ++ +D + + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLSEVKAAEGRILLFVDELHTVVGAGAAEGAMDAGNMLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 +I ++ + FQ+ D PS+E+ ++ E+ V+ Sbjct: 108 LHMIGATTLDEYRKHIEKDAALERRFQQVLVDEPSVEDTI--SILRGLRERLEVFHGVKI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 QDTALVSAATLSHRYITDRFLPDKAID 192 >gi|28897788|ref|NP_797393.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Vibrio parahaemolyticus RIMD 2210633] Length = 756 Score = 141 bits (357), Expect = 3e-32 Identities = 32/182 (17%), Positives = 59/182 (32%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F K E I +D + I + G+ L+ K Sbjct: 259 GTKYRGDFEKRFKSILKQLEKEEDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGK 318 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ+ D PSL++ ++ E V+ Sbjct: 319 LRCIGSTTYQEYSNIFEKERALSRRFQKIDVVEPSLDDT--TKILMGLKPKYEAHHEVRY 376 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK-MERQKKKPQIEELESIVR 385 T + + E + + A D + D+A A + L R+KK + ++E++V Sbjct: 377 TNKALRAAVELSAKYINERHLPDKAID--VIDEAGARSRLAPASRRKKTVGVADIEAMVA 434 Query: 386 LK 387 Sbjct: 435 KM 436 >gi|34499420|ref|NP_903635.1| probable ClpA/B-type chaperone [Chromobacterium violaceum ATCC 12472] Length = 875 Score = 141 bits (357), Expect = 3e-32 Identities = 37/269 (13%), Positives = 73/269 (27%), Gaps = 38/269 (14%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + Q +I +D + A + + + Sbjct: 278 EFENRLRQVIDEVKASPVPIILFIDEAHTLIGAGGAAGQNDAANLLKPALARGELRTIAA 337 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + P+ E ++ V+ + Sbjct: 338 TTWAEYKKYFEKDAALARRFQVVKVEEPAPE--IAVQMVRGLTDAMAKHHKVEILNEAVA 395 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A A + + R K IE++ ++ E Sbjct: 396 AAVQLSSRYIAGRQLPDKAISV----LDTACARVALSRAGKPGPIEDVTVLIDNIDRETA 451 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLK--LRLSEAEERRQYLFEELKAQE 450 + + A R AE +K + L +A E +Q L EE+ + Sbjct: 452 ALEREEGHAERIAELQA-------------QRAKLEQDLAALHQAWEAQQKLIEEIDELK 498 Query: 451 NSQCDFDPMKMR-------MESEIRGLLK 472 ++ + P K R E+R L K Sbjct: 499 AAKDEAKPAKGRKLSPLQAKRKELRELQK 527 >AAA_CLPB_201-394_PF00004.17 Length = 194 Score = 141 bits (356), Expect = 4e-32 Identities = 15/146 (10%), Positives = 32/146 (21%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + +I +D + I + + + Sbjct: 48 GAKYRGEFEDRLKKVVEEVKKAGNVILFIDEIHTIVGAGASEGSMDAANILKPALARGEL 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I + + FQ + P++ E ++ E V Sbjct: 108 HTIGATTLKEYRKYFEKDAALQRRFQPIFLNEPTIN--EALQILRGIKERLEAHHNVTIY 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + A+ R A D Sbjct: 166 DSALVAAAKLSSRYITDRYLPDKAID 191 >AAA_Q5BE67_125-318_PF00004.17 Length = 194 Score = 141 bits (356), Expect = 4e-32 Identities = 14/146 (9%), Positives = 35/146 (23%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 48 GAKFRGDFEERLKSVLKEVEEAQGGVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGE 107 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ PS+ ++ E+ V+ T Sbjct: 108 LQCCGATTLNEYRLIEKDVALARRFQPIQVGEPSVAATI--SILRGIKDKYEVHHGVRIT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 DGALVAAATYSNRYITDRFLPDKAID 191 >AAA_CLPB1_203-398_PF00004.17 Length = 196 Score = 141 bits (356), Expect = 4e-32 Identities = 16/148 (10%), Positives = 38/148 (25%), Gaps = 13/148 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKL 274 F + ++ +D + + ++ + Sbjct: 48 GAKYRGEFEDRLKAVLREVTESNGNIVLFIDELHTVVGTGSNQQGAMDAGNLLKPMLARG 107 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + I ++ + FQ+ D PS+EN ++ E+ V+ Sbjct: 108 ELRCIGATTLDEFRKFIEKDAALERRFQQVYVDQPSVENTI--SILRGLKERYEVHHNVK 165 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACD 353 + + A R A D Sbjct: 166 ISDSALVAAATLSARYIADRFLPDKAID 193 >gi|75675887|ref|YP_318308.1| AAA ATPase [Nitrobacter winogradskyi Nb-255] Length = 801 Score = 141 bits (356), Expect = 4e-32 Identities = 31/235 (13%), Positives = 68/235 (28%), Gaps = 16/235 (6%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + Q + +D + + + G + Sbjct: 265 GTRYRGDFEERLKQVLKELEAHPNAVLFIDEIHTVIGAGATSGGAMDASNLLKPALASGT 324 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + ++ FQ+ D + PS+E+ ++ E ++ Sbjct: 325 IRCMGSTTYKEYRQHFEKDRALVRRFQKIDVNEPSVEDAIA--ILKGLKPYFEDYHKLKY 382 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 T +E + R + A D + D++ A L E ++KK I+E+E+ + Sbjct: 383 TNDAIEAAVQLSSRYIHDRKLPDKAID--VIDESGAAQMLVTENKRKKTIGIKEIETTIA 440 Query: 386 LK-QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERR 439 + E + E T+ R E + Sbjct: 441 AMARIPPKSMSKDDAEVLKHLEQTLKRVVFGQDRAIEALTASIKLARAGLREPEK 495 >AAA_Q7U7P3_206-399_PF00004.17 Length = 194 Score = 141 bits (355), Expect = 4e-32 Identities = 16/146 (10%), Positives = 38/146 (26%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D V + + + + Sbjct: 48 GTKYRGEFEERLKKIMEEIKAAGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ + PS+++ ++ E ++ T Sbjct: 108 QCIGATTLDEYRKHIERDAALERRFQPVNVGEPSIDDTI--EILRGLRERYEQHHRLKIT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 DDALVAAATLGDRYISDRFLPDKAID 191 >gi|68003568|ref|ZP_00536114.1| AAA ATPase, central region:Clp, N terminal [Geobacter metallireducens GS-15] Length = 878 Score = 141 bits (355), Expect = 5e-32 Identities = 35/261 (13%), Positives = 65/261 (24%), Gaps = 24/261 (9%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + +I +D I G + + + Sbjct: 272 EFENRLKSVIEEVKGSPRPIILFIDEAHTIIGAGGQTGGGDAANLLKPALARGELRTIAA 331 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ D P +E ++ E A V + Sbjct: 332 TTWSEYKKYFEKDAALARRFQPVKLDEPDVE--TAVLILRGLKEKYEAAHGVTIRDDGIR 389 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R + A D A +K+ K +EE E ++ + E Sbjct: 390 AAAELSSRYLSGRQLPDKAVD----LLDTAAARVKLLLTGKPGAVEEKERRIQALEREEA 445 Query: 393 MFQLKADEAR---REAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE--ERRQYLFEELK 447 R E T+++ + + AE R+ L E + Sbjct: 446 AMARDQLHGRPVDDERLDLLKAELLTLREELAAVTARWHREQELAAEVMALRKELSTEAE 505 Query: 448 AQENSQ---CDFDPMKMRMES 465 E+ + R+ Sbjct: 506 ENEDRRGLKRQVTEATARLAE 526 >gi|67155734|ref|ZP_00417361.1| AAA ATPase, central region:Clp, N terminal:Protein of unknown function DUF104 [Azotobacter vinelandii AvOP] Length = 756 Score = 141 bits (355), Expect = 5e-32 Identities = 32/182 (17%), Positives = 56/182 (30%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F K I +D + I + G L+ + Sbjct: 260 GTKYRGDFEKRFKALLNELRKKPHAILFIDEIHTIIGAGAASGGVMDASNLLKPLLSSGE 319 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ+ D PS+E+ G ++ E ++ Sbjct: 320 IRCIGSTTFQEFRGIFEKDRALARRFQKVDVIEPSVEDTVG--ILRGLKPRFEQHHGIEY 377 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 + + AE R A D + D+A A L+ E R+ K + ++E IV Sbjct: 378 SDEALRAAAELSFRYINDRHMPDKAID--VIDEAGAFQRLQPEDRRAKLIDVAQVEDIVA 435 Query: 386 LK 387 Sbjct: 436 KI 437 >gi|511145|emb|CAA51655.1| hemolysin [Brachyspira hyodysenteriae] Length = 828 Score = 141 bits (355), Expect = 5e-32 Identities = 23/201 (11%), Positives = 60/201 (29%), Gaps = 17/201 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 259 GTKYRGEFEERIKNIVLEIKKASNIIIFIDELHTLIGAGGAEGALDAANMLKPALSRGEI 318 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ ++ FQ + + PS+E+ ++ E V+ T Sbjct: 319 QCIGATTINEYKKYIEKDGALVRRFQPINVEEPSIEDTI--EILNGIKGKYEEHHKVKYT 376 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + A R + A D L D+A + ++ + + ++LE + Sbjct: 377 DEAINAAAVLSKRYIFERHLPDKAID--LIDEAGSRA--RLLNMTRPQEFKDLEKKIEEL 432 Query: 388 QAEADMFQLKA--DEARREAE 406 + ++A + + Sbjct: 433 NQQKKRVVESQNFEDAAKIRD 453 >gi|75187548|ref|ZP_00700815.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Escherichia coli E24377A] Length = 881 Score = 141 bits (355), Expect = 5e-32 Identities = 29/244 (11%), Positives = 63/244 (25%), Gaps = 21/244 (8%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + E ++ +D I A G + + + Sbjct: 291 EFEQRLKNVIDAVQKSPEPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAA 350 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ D P ++ ++ A V ++ Sbjct: 351 TTWSEYKQYFERDAALERRFQMVKVDEP--DDDTACLMLRGLKARYAQHHGVHMLDSAIQ 408 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A D L D A A ++M + +L + + E + Sbjct: 409 TAVRLSRRYLTGRQLPDKAVD--LLDTAGA--RVRMSLDTLPEPLTQLHARLAALDIERE 464 Query: 393 MFQLK---ADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFEELK 447 + EA E ++Y + + + RQ + + Sbjct: 465 AIEQDSVFYPEASPERLAELIDLRDELQAEAGHLETQYQQEKRLAQQIMTLRQEGTDSTE 524 Query: 448 AQEN 451 Q+ Sbjct: 525 LQQQ 528 >gi|69951133|ref|ZP_00638900.1| AAA ATPase, central region:Clp, N terminal [Shewanella frigidimarina NCIMB 400] Length = 868 Score = 140 bits (354), Expect = 6e-32 Identities = 29/265 (10%), Positives = 70/265 (26%), Gaps = 44/265 (16%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D + A + + + + I Sbjct: 276 EFENRLKALIKEVKQSVKPIILFIDEAHTMIGSGGQAGQNDAANLLKPALARGELRTIAA 335 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + FQ + PS E ++ E + + + + Sbjct: 336 TTWAEYKKFFEKDAALTRRFQVVKIEEPSPEQAIA--MMRGLLPVMEGHHKILVSDQALC 393 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A L D ACA + M + +E L+ ++ + Sbjct: 394 AAVNLSHRYITGRQLPDKAVS--LLDTACA--RVAMSQASTPGMVESLQRQIQQLDTQIS 449 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENS 452 + + K ++E ++ + L +EL Sbjct: 450 ILTREQKTGSDH------------------------KKSITELTKKHKLLSKELAPLTTQ 485 Query: 453 QCDFDPMKMRMESEIRGLLKGMEMT 477 D ++ +I L+ ++ + Sbjct: 486 WQD----ELVTVQKIAELVGQIQAS 506 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 140 bits (354), Expect = 6e-32 Identities = 15/147 (10%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + + + + Sbjct: 48 GAKFRGEFEERLKAVLKDIAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ + PS E+ ++ E+ V+ Sbjct: 108 LHCVGATTLDEYRKYIEKDAALERRFQKVLVEEPSTEDAIA--ILRGLKERYEVHHGVEI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R A D Sbjct: 166 TDPAIIAAATLSQRYITDRNLPDKAID 192 >gi|27361601|gb|AAO10508.1| ATP-dependent Clp protease [Vibrio vulnificus CMCP6] Length = 548 Score = 140 bits (354), Expect = 6e-32 Identities = 31/182 (17%), Positives = 60/182 (32%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F K + I +D + I + G+ L+ K Sbjct: 224 GTKYRGDFEKRFKTILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSGGK 283 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ+ D PSL++ ++ + E V+ Sbjct: 284 LRCIGSTTYQEYSNIFEKERALSRRFQKIDVVEPSLDDT--TKILMGLKSKYEAHHDVRY 341 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK-MERQKKKPQIEELESIVR 385 T + + E + + A D + D+A A + L R+KK + ++E++V Sbjct: 342 TNKALRAAVELSAKYINERHLPDKAID--VIDEAGARSRLTPASRRKKTVGVADIEAMVA 399 Query: 386 LK 387 Sbjct: 400 KM 401 >AAA_Q96TW3_202-394_PF00004.17 Length = 193 Score = 140 bits (354), Expect = 7e-32 Identities = 18/146 (12%), Positives = 40/146 (27%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + E +I +D + + + ++ + + Sbjct: 47 GAKYRGEFEERLKAVLKEVKESEEGIILFIDEIHTVLGAGKGEGSMDAANLLKPMLARGE 106 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ FQ+ D PS+ ++ E V+ T Sbjct: 107 LRCIGATTLTEYKVIEKDPAFERRFQKVDVGEPSVAATI--SILRGLKERYESYHGVKIT 164 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + V A+ R A D Sbjct: 165 DSALVVAAQLSDRYITTRFLPDKAID 190 >gi|33641129|emb|CAE22259.1| putative ATP-dependent Clp protease, Hsp 100, ATP-binding subunit ClpB [Prochlorococcus marinus str. MIT 9313] Length = 928 Score = 140 bits (354), Expect = 7e-32 Identities = 38/271 (14%), Positives = 74/271 (27%), Gaps = 26/271 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + D +A ++ +D + + S D + + Sbjct: 307 GAKFRGQFEERLRSVLKEVSDPDAGVVLFIDELHTVV--SSDRSSADAGSLLKPALARGD 364 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ+ PSLE ++ E+ V Sbjct: 365 LRCIGATTPENYRRTVEKDQALNRRFQQVLIKEPSLE--LSVEILRGLKERYELHHGVTI 422 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + R A D L D A LKM+ K +EE E+ +R Sbjct: 423 TDGAVTAANRLADRYISDRCLPDKAID--LID--EAAAQLKMDVTSKPQVVEEAEAELRR 478 Query: 387 KQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEER--RQYLFE 444 + + + R + + ++ R AE R Q + Sbjct: 479 VELALLAAEQAPEVERVQLQ----AARIAAASQLTELQERWQIERDHLAELRDLLQQDED 534 Query: 445 ELKAQENSQCDFDPMKM--RMESEIRGLLKG 473 A ++ D ++ + + Sbjct: 535 LRNAIAEAERLGDLEAAARLQYDQLHRVQQR 565 >gi|69938169|ref|ZP_00632702.1| AAA ATPase, central region:Clp, N terminal [Paracoccus denitrificans PD1222] Length = 915 Score = 140 bits (353), Expect = 7e-32 Identities = 30/245 (12%), Positives = 67/245 (27%), Gaps = 20/245 (8%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F K + +++I +D + A + + + Sbjct: 287 EFEKRLKSVIDEVQASVKSVILFIDEAHTLIGAGGAAGTGDAANLLKPALARGELRTVAA 346 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ + PS ++ E V+ + Sbjct: 347 TTWAEYKQHIEKDPALTRRFQVVKVEEPS--EAAAVEMLRGVAGVLEKHHRVEILDEAIG 404 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A L D ACA + + + ++E+LE ++ + EA Sbjct: 405 AAVSLSHRYIPARQLPDKAIS--LLDTACA--RVAVSQHATPAELEDLERRLQALEIEAG 460 Query: 393 MFQLKADEARR--EAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFEELKA 448 + +A E + ++ + S+ R L E A Sbjct: 461 IIAREAAIGIDTTERQAANDAARTATEAERAAALERWEAEKALVSDILTLRAELRGEGMA 520 Query: 449 QENSQ 453 + + Sbjct: 521 LDETG 525 >AAA_Q25646_211-406_PF00004.17 Length = 196 Score = 140 bits (353), Expect = 8e-32 Identities = 15/141 (10%), Positives = 38/141 (26%), Gaps = 13/141 (9%) Query: 224 FVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKLKSKLIDP 281 F + + D ++ +D + + L+ + + + I Sbjct: 55 FEERLKSILKEIQDQKGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPLLARGELRCIGA 114 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ+ +PS++ ++ E+ V+ + Sbjct: 115 TTVSEYRQFIEKDKALERRFQQILVVNPSVDETI--SILRGLKERYEVHHGVRILDSALV 172 Query: 333 VVAEEKMRMFKKARSVLDACD 353 A R A D Sbjct: 173 QAAILSDRYISYRFLPDKAID 193 >gi|67916618|ref|ZP_00510321.1| AAA ATPase, central region [Clostridium thermocellum ATCC 27405] Length = 803 Score = 140 bits (353), Expect = 9e-32 Identities = 33/274 (12%), Positives = 72/274 (26%), Gaps = 37/274 (13%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + +I +D + I E + K + Sbjct: 232 GTQFRGQFENRMKGIIEECKALGNIILVIDEIHNIMGAGEAEGAMNAANILKPALAKGEI 291 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 ++I ++ + + FQ D PS+E ++ E V+ + Sbjct: 292 QVIGATTLDEYRKHIEKDSALERRFQPVLVDEPSVEETI--EILRGIKDYYESYHRVKIS 349 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + R A D + D+A + ++K V L Sbjct: 350 DEVIRAAVILSERYITDRFLPDKAID--VLDEAGSRANIKN---------------VVLL 392 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + E + + + + E E + KL E ++ EL Sbjct: 393 EYE--ALKEELKKVQEEKENAVSADSIEDYQKAADLKVRECKLLQQIKELEQKSKDMELT 450 Query: 448 AQENS-------QCDFDPMKMRMESEIRGLLKGM 474 + + + + ++ L + + Sbjct: 451 VDDIAYVIESWTKIPVQRLTEIEAEKLLNLEERL 484 >gi|37680506|ref|NP_935115.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Vibrio vulnificus YJ016] Length = 781 Score = 140 bits (352), Expect = 1e-31 Identities = 31/182 (17%), Positives = 60/182 (32%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F K + I +D + I + G+ L+ K Sbjct: 284 GTKYRGDFEKRFKTILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSGGK 343 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ+ D PSL++ ++ + E V+ Sbjct: 344 LRCIGSTTYQEYSNIFEKERALSRRFQKIDVVEPSLDDT--TKILMGLKSKYEAHHDVRY 401 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK-MERQKKKPQIEELESIVR 385 T + + E + + A D + D+A A + L R+KK + ++E++V Sbjct: 402 TNKALRAAVELSAKYINERHLPDKAID--VIDEAGARSRLTPASRRKKTVGVADIEAMVA 459 Query: 386 LK 387 Sbjct: 460 KM 461 >gi|66855575|ref|ZP_00399649.1| AAA ATPase, central region:Clp, N terminal [Anaeromyxobacter dehalogenans 2CP-C] Length = 760 Score = 140 bits (352), Expect = 1e-31 Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + A I +D + I + + Sbjct: 257 GTKFRGEFEQRLKGVIAGVKKTPHAILFIDEIHTIVGAGATTGSSMDASNLLKPALASGE 316 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + + FQ+ + PS+E+ ++ E V+ Sbjct: 317 LRCIGSTTFHDYKQTFERDHALARRFQKIEVHEPSVEDT--VKILRGLKKVYEEHHGVEY 374 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 T R + AE + + A D + D+A A ++ E R+ ++ ++E +V Sbjct: 375 TPRALRAAAELSAKHINDRQLPDKAID--VLDEAGARDRMRPEARRHRRITGRDVERVVA 432 Query: 386 LK 387 Sbjct: 433 KI 434 >AAA_CLPB_201-395_PF00004.17 Length = 195 Score = 140 bits (352), Expect = 1e-31 Identities = 13/147 (8%), Positives = 35/147 (23%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + Sbjct: 48 GAKFRGEFEERLKAVIEAVQKSDGGVILFIDELHTLVGAGASEGSMDASNLLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ P++E+ ++ E+ V+ Sbjct: 108 LRSIGATTLNEYRKYIEKDAALERRFQQVYCVQPTVEDTIA--ILRGLQEKYEVHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + R A D Sbjct: 166 KDEALVAATVLSDRYITNRFLPDKAID 192 >gi|48860810|ref|ZP_00314719.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Microbulbifer degradans 2-40] Length = 761 Score = 140 bits (352), Expect = 1e-31 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F K A E I +D + I + G L+ Sbjct: 265 GTKYRGDFEKRFKGLLADLKKREGAILFIDEIHTIIGAGAASGGVMDASNLLKPLLTSGD 324 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I D + FQ+ D + PS+++ ++ E ++ Sbjct: 325 LRCIGSTTFQEYRGIFDKDRALSRRFQKIDVNEPSVDDT--YKILKGLKTRFEKHHNLKY 382 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 T ++ AE + A D + D+A A L+ E ++KK+ + ++E IV Sbjct: 383 TDTALKAAAELAGKYISDRFMPDKAID--VIDEAGAFQQLQPESKRKKQIGVRDIEEIVA 440 Query: 386 LK 387 Sbjct: 441 KI 442 >AAA_Q7SDI0_128-321_PF00004.17 Length = 194 Score = 140 bits (352), Expect = 1e-31 Identities = 14/146 (9%), Positives = 38/146 (26%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + + +I +D + + + + + + Sbjct: 48 GAKFRGDFEERLKKVLGEVQEANGEVILFIDELHTLLGLGKAEGSIDASNLLKPALSRGE 107 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + ++ + FQ P++E+ ++ E+ V+ T Sbjct: 108 LQCCGATTMTEYRQIEKDVALARRFQPIIVSEPTVEDTI--SILRGIKEKYEVHHGVRIT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 DGALVAAATYSNRYITDRFLPDKAID 191 >gi|17431220|emb|CAD17900.1| PUTATIVE CLPA/B-TYPE CHAPERONE PROTEIN [Ralstonia solanacearum] Length = 905 Score = 139 bits (351), Expect = 1e-31 Identities = 26/237 (10%), Positives = 52/237 (21%), Gaps = 20/237 (8%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + +I +D I A + + + Sbjct: 283 EFENRLKNVIDEVKKSPKPIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAA 342 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ D PS ++ E V+ + Sbjct: 343 TTWSEYKKYFEKDAALARRFQVVKVDEPS--EPLAAAMLRGMAPLMERHFGVRVLDEAIT 400 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A A + + + IE+ + ++ E Sbjct: 401 EAVRLSHRYISGRQLPDKAVSV----LDTACAKVALGQSATPGAIEDDQKLLERLLGEIA 456 Query: 393 MFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 Q + A T + + R R Q L E + Sbjct: 457 ALQREQSAGAAHDARLEALQAKRAELEQRIAQNTERLARERA--LVARIQALREARE 511 >gi|68529788|gb|EAN52750.1| AAA ATPase, central region:Clp, N terminal [Ralstonia metallidurans CH34] Length = 893 Score = 139 bits (351), Expect = 1e-31 Identities = 28/256 (10%), Positives = 62/256 (24%), Gaps = 21/256 (8%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + ++ +D + A G + + + Sbjct: 282 EFEQRLKNVIEAVQQSPTPILLFIDEAHTLIGAGNTAGGADAANLLKPALARGELRTIAA 341 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ D P ++ ++ V T + Sbjct: 342 TTWSEYKQYFERDAALERRFQMVKVDEP--DDENACLMLRGLKDRYAQHHNVHITDAAVA 399 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A D L D A ++M ++ + I LE+ E Sbjct: 400 AAVRLSRRYLTGRQLPDKAVD--LID--TAAARVRMSQEARPVAICTLEAERAALGVEYL 455 Query: 393 MFQLKA---DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ 449 Q E +R + + A ++ L + +A Sbjct: 456 ALQQDQGATGEDKRNRLSAIETRLRELAIELGQLEFELAAQKD--AADKLMVLRAQWQAA 513 Query: 450 ENSQCDFDPMKMRMES 465 ++ D + Sbjct: 514 TDASERHDLASSIQAA 529 >AAA_Q6RYQ7_204-398_PF00004.17 Length = 195 Score = 139 bits (350), Expect = 2e-31 Identities = 16/147 (10%), Positives = 37/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQ 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + FQ+ PS+ + ++ E V+ Sbjct: 108 LRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDT--VSILRGLKEKYEGHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 R + V A+ R A D Sbjct: 166 QDRALVVAAQLSARYIMGRHLPDKAID 192 >gi|32042508|ref|ZP_00140091.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pseudomonas aeruginosa UCBPP-PA14] Length = 849 Score = 139 bits (350), Expect = 2e-31 Identities = 22/242 (9%), Positives = 55/242 (22%), Gaps = 19/242 (7%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + +I +D + G + + + Sbjct: 271 EFEQRLKGVIDAVRNSAQPIILFIDEAHTLIGAGGAEGGSDAANLLKPALARGELRTLAA 330 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + P + ++ E VQ + Sbjct: 331 TTWLEYKKYFEKDPALTRRFQLVQVEEP--DEATAVEMLRGVAGKLEQHHGVQIMDAAIV 388 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A A + + + P +E L + + E Sbjct: 389 DAVKLSHRYISGRQLPDKAISV----LDTACARVALGQHDVPPPLESLRHREQALEEELQ 444 Query: 393 MFQLKADEARRE--AEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE 450 + + +++ + R E E L E Sbjct: 445 RLRREQATGLDHSARITALESESGDNRRTIRELETRWDEER-EAVRELLDTRRELLALSE 503 Query: 451 NS 452 ++ Sbjct: 504 SA 505 >AAA_CLPB_199-393_PF00004.17 Length = 195 Score = 139 bits (350), Expect = 2e-31 Identities = 15/147 (10%), Positives = 41/147 (27%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + I + ++ + + Sbjct: 48 GAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGSLDAGNMLKPMLARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 ++I ++ + FQ + P++++ ++ E V+ Sbjct: 108 LRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNVDDTI--SILRGLKDKFETYHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R + A D Sbjct: 166 TDTAIVEAATLSQRYISDRKLPDKAID 192 >gi|68194693|gb|EAN09176.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Enterococcus faecium DO] Length = 830 Score = 139 bits (350), Expect = 2e-31 Identities = 31/249 (12%), Positives = 70/249 (28%), Gaps = 41/249 (16%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + ++ +I +D + + + + + Sbjct: 264 GTKYRGEFEDRMKKVIDEIYNDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGEL 323 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + + F D P+ E E ++ E V+ T Sbjct: 324 QTIGATTLDEYQKYIEKDSALERRFARIQVDEPTPE--EAEVILQGLRTRYEEHHGVEIT 381 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + +R + A D L D++ A L Q + L + Sbjct: 382 DEAVRAAVNLSVRYITSRQLPDKAID--LIDESAAKVRL--------DQTDHLTKS-TVI 430 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + E D + + A ++ + +LR E+ + +++ Sbjct: 431 KLEIDELVQEKEAAIQKQDF-----------------ENAAQLRRQ--EKALRKKLQKVS 471 Query: 448 AQENSQCDF 456 A E Q Sbjct: 472 AIEAKQEQG 480 >gi|23024482|ref|ZP_00063692.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 684 Score = 139 bits (350), Expect = 2e-31 Identities = 30/186 (16%), Positives = 59/186 (31%), Gaps = 12/186 (6%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + + + +I +D + +I G + + + +LI Sbjct: 138 RGQFEARMRELMKEVTNSDDVILFIDEIHEIMGAGNAEGGMDAGNILKPALARGEFQLIG 197 Query: 281 --------PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ I FQ + PS E ++ E V + ++ Sbjct: 198 ATTLNEYRKIEKDGAIARRFQPVQVEEPSKEETIT--ILEGISERYEKYHYVTFSDSALQ 255 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 E R + A D L D+A + +L M+ K +E+ +LKQ D Sbjct: 256 AAVELSDRYIPERFLPDKAID--LLDEAGSRKNLTMKVADPKTIQVNIEAADKLKQEAID 313 Query: 393 MFQLKA 398 + Sbjct: 314 KEDFEK 319 >AAA_Q8XHP1_209-402_PF00004.17 Length = 194 Score = 138 bits (349), Expect = 2e-31 Identities = 18/146 (12%), Positives = 39/146 (26%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + + + D + +I +D + I + + + Sbjct: 48 GAKYRGEFEERLKKVLNEVKDSDDIILFIDEMHNIVGAGGAEGAIDASNILKPALARGEI 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + + FQ PS E+ ++ E+ V+ T Sbjct: 108 QCIGATTTDEYRKNIEKDSALERRFQPVVVKEPSKED--SVLILKGLREKYEVHHNVKLT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 +E R A D Sbjct: 166 DEAIEAAVNLSSRYITDRFLPDKAID 191 >gi|56459783|ref|YP_155064.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones [Idiomarina loihiensis L2TR] Length = 756 Score = 138 bits (349), Expect = 2e-31 Identities = 30/202 (14%), Positives = 65/202 (32%), Gaps = 16/202 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F K + E I +D + I + G L+ + Sbjct: 258 GTKYRGDFEKRFKMLLKELQEKEHAILFIDEIHTIIGAGAASGGVLDASNLIKPLLSSGQ 317 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K I + ++ FQ+ D PS+E+ ++ E ++ Sbjct: 318 LKCIGSTTYNEFKNVFEKDRALVRRFQKVDVVEPSVEDT--TKILMGLKERYESHHGIRY 375 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACA-VTDLKMERQKKKPQIEELESIVR 385 T ++ AE + + A D + D+A A L +++K + ++E+I+ Sbjct: 376 TQPAIKAAAELSAKYINERHLPDKAID--VMDEAGASQRLLPPSKRRKTVGVSDIETIIA 433 Query: 386 LK-QAEADMFQLKADEARREAE 406 + + ++ + Sbjct: 434 KIARIPEQSVSRSDQDLLKQLD 455 >AAA_Q85G08_202-395_PF00004.17 Length = 194 Score = 138 bits (349), Expect = 2e-31 Identities = 15/146 (10%), Positives = 39/146 (26%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + +I +D V + + + + Sbjct: 48 GTKYRGEFEERLKKVMDEIREVGNVILVIDEVHTLIGAGAAEGAIDAANILKPALARGEL 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+++ ++ E V+ + Sbjct: 108 QCIGATTLEEYRKHIEKDAALERRFQPVMVGEPTVDETI--EILKGLRDRYEEHHRVRIS 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 +E A+ + A D Sbjct: 166 DAALEAAAKLSSQYIADRYLPDKAID 191 >gi|9837310|gb|AAG00524.1| Clp protease-associated protein ClpB [Yersinia enterocolitica] Length = 890 Score = 138 bits (349), Expect = 3e-31 Identities = 24/221 (10%), Positives = 55/221 (24%), Gaps = 18/221 (8%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + +I +D V + +A + + + + I Sbjct: 283 EFEARLKNVLDEAMASPTPVILFIDEVHTLVGAGGNAGTGDAANLLKPALARGQLRTIGA 342 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ D P + ++ E V ++ Sbjct: 343 TTWSEFKRHIEKDPALTRRFQVLQVDEP--DEDTAISMLRGLTPALEKHHGVWIMDEALQ 400 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A L D ACA + + + + ++++L Q E Sbjct: 401 AAVRLSHRYIPARQLPDKAIS--LLDTACA--RVAVAQFSQPAELQQLTFQSETAQTELS 456 Query: 393 MFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKYLKLR 431 + + + E ++ R Sbjct: 457 SLEKAQHFGKGQDERTALLEATIAQHSAAANKLEQRWQAER 497 >AAA_CLPB_199-393_PF00004.17 Length = 195 Score = 138 bits (349), Expect = 3e-31 Identities = 14/147 (9%), Positives = 32/147 (21%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKYKGEFEERLKSVVNEVKKSEGDIILFIDEIHTLVGAGKGEGAMDAANILKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ D P + ++ E V+ Sbjct: 108 LRSIGATTLDEYQKYFEKDKALERRFQIVQVDEPDTLSTI--SILRGLKERYENHHHVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + E R A D Sbjct: 166 KDDAIIAAVELSSRYITDRFLPDKAID 192 >gi|29338203|gb|AAO76005.1| ATP-dependent Clp protease [Bacteroides thetaiotaomicron VPI-5482] Length = 841 Score = 138 bits (349), Expect = 3e-31 Identities = 30/238 (12%), Positives = 63/238 (26%), Gaps = 30/238 (12%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + I A + + + Sbjct: 280 GTKYRGQFEERIRSILNELQRNPNVILFIDEIHTIVGAGSAAGSMDAANMLKPALARGEI 339 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ + + ++ E V T Sbjct: 340 QCIGATTLDEYRKNIEKDGALERRFQKVMVEPTTAAETL--QILRNIKDKYEDHHNVNYT 397 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D A + + + +IEE E ++ Sbjct: 398 DEALEACVKLTDRYITDRNFPDKAID----ALDEAGSRVHLTNVNVPKEIEEQEKLI--- 450 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 + + K +EA + K L L+L E + + +E Sbjct: 451 ----EEAKSKKNEAVKSQ--------NFELAASFRDKEKELTLQLDEMKREWENSLKE 496 >AAA_CLPB2_202-397_PF00004.17 Length = 196 Score = 138 bits (349), Expect = 3e-31 Identities = 16/148 (10%), Positives = 37/148 (25%), Gaps = 13/148 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSE-DARGKKLFWKADELIEKL 274 F + ++ +D + + ++ + Sbjct: 48 GAKFRGDFEDRLKAVLHEVTHSEGQIVLFIDELHTVVGAGANQNSSMDASNLLKPMLARG 107 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + I ++ + FQ+ PS+E+ ++ EI V+ Sbjct: 108 ELRCIGATTLDEYRKYIEKDAALERRFQQVYIGQPSVEDTI--SILRGLKDRYEIHHNVK 165 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACD 353 T + A R A D Sbjct: 166 ITDSALVAAAMLSDRYISDRYLPDKAID 193 >gi|71482365|ref|ZP_00662059.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Prosthecochloris vibrioformis DSM 265] Length = 892 Score = 138 bits (349), Expect = 3e-31 Identities = 30/240 (12%), Positives = 64/240 (26%), Gaps = 34/240 (14%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + I + + + + Sbjct: 313 GTKYRGQFEERMKALMNELEKCRDVILFIDELHTIIGAGGASGSLDASNIFKPALARGEL 372 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ + S++ ++ + E V+ + Sbjct: 373 QCIGATTLDEYRQYIEKDGALDRRFQKIMVEPTSVDETI--QILNNIKSKYESHHHVRYS 430 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D A + + I ELE V Sbjct: 431 EDSIEKAVKLAERYITDRFLPDKAIDV----MDEAGARVHLSNIHVPKAILELEKSVEEV 486 Query: 388 QAEADMFQLKA--DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 +AE + +EA + + K L L A++ + E Sbjct: 487 KAEKNQVVKMQNFEEAAKLRD-----------------KEKNLLEALEHAKQEWEDEAAE 529 >AAA_Q6AC89_75-269_PF00004.17 Length = 195 Score = 138 bits (348), Expect = 3e-31 Identities = 16/144 (11%), Positives = 37/144 (25%), Gaps = 12/144 (8%) Query: 220 ELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKL 278 F + + +I +D + + ++ + + +L Sbjct: 51 YRGQFEERLKAVLKEIDAAEGRIITFVDELHILMGAGGGEGSVAASNMLKPMLARGELRL 110 Query: 279 IDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTAR 329 I ++ + FQ+ PS+E+ ++ E V Sbjct: 111 IGATTLDEYREFIEKDAALERRFQQVYVGEPSVEDTVA--ILRGLKGRYEAHHGVTIEDS 168 Query: 330 KMEVVAEEKMRMFKKARSVLDACD 353 + A R + A D Sbjct: 169 ALVAAASLSNRYITARQLPDKAID 192 >AAA_O69287_202-395_PF00004.17 Length = 194 Score = 138 bits (348), Expect = 3e-31 Identities = 17/146 (11%), Positives = 32/146 (21%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 F + E +I +D + I + + + Sbjct: 48 GAKYRGEFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILKPALARGEL 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I + + FQ + PS+ ++ EI V Sbjct: 108 HTIGATTLKEYRKYFEKDAALQRRFQPVNVGEPSVNEALA--MLRGIKEKLEIHHNVTIN 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + A+ R A D Sbjct: 166 DSALVAAAKLSKRYITDRFLPDKAID 191 >gi|68178595|ref|ZP_00551709.1| IMP dehydrogenase/GMP reductase:AAA ATPase, central region:Clp, N terminal [Desulfuromonas acetoxidans DSM 684] Length = 754 Score = 138 bits (348), Expect = 3e-31 Identities = 31/230 (13%), Positives = 66/230 (28%), Gaps = 19/230 (8%) Query: 188 IREGLIKMGHSAKGASGMTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDF 247 + E +M T F + + + E I +D Sbjct: 232 LFEEDSAPAILKDSQIYSLDMG---ALLAGTKYRGDFEERLKAVLNELTEQEQPILFIDE 288 Query: 248 VRKIFRGSEDARG-KKLFWKADELIEKLKSKLIDP---------LDACNFILMFFQECDS 297 + I + G ++ + I + + FQ+ D Sbjct: 289 IHTIIGAGSTSGGSMDASNILKPMLASGDIRCIGATTYDEYKTLFEKDRALSRRFQKIDV 348 Query: 298 DSPSLENGEGGFLIAPQDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELE 357 PS++ ++ + E ++ + ++ AE R A D L Sbjct: 349 HEPSVDETVA--ILQGLRSHYEQFHNIRYSDEVLQAAAELSNRYLTHRHLPDKAID--LI 404 Query: 358 DKACAVTDLKMERQKKKPQIEELESIVRLK-QAEADMFQLKADEARREAE 406 D+ A + R ++ Q++++E+IV Q + + E Sbjct: 405 DEIGARLRTQGSR-RQTIQVKDIETIVAEMAQIPTRSVSRDDRKQLKHLE 453 >AAA_Q9WY41_206-399_PF00004.17 Length = 194 Score = 138 bits (348), Expect = 3e-31 Identities = 18/146 (12%), Positives = 36/146 (24%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F K + + + +I +D + I + + + Sbjct: 48 GTKYRGEFEKRMKKLLQIVTKDKNIILFIDEIHTIVGAGSAEGAIDAANILKPALARGEI 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 I ++ + FQ+ P+ E ++ E V T Sbjct: 108 SCIGATTPDEYRRYIEKDAALERRFQKIYVKEPTEEETL--EILKGLKRKYEAHHKVIYT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + +E R A D Sbjct: 166 DKALEAAVYLSKRYITDHYLPDKAID 191 >gi|4981954|gb|AAD36462.1| ATP-dependent Clp protease, ATPase subunit [Thermotoga maritima MSB8] Length = 791 Score = 138 bits (348), Expect = 3e-31 Identities = 35/256 (13%), Positives = 72/256 (28%), Gaps = 31/256 (12%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 T F + + + +I +D V + + + Sbjct: 250 GTRFRGDFEERLKRLLDELKRKKGEVILFIDEVHTVVGAGAAEGALDAANIMKPELTTGE 309 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 ++I ++ + FQ + P++E ++ E V+ Sbjct: 310 IQIIGATTVEEYRKYIEKDRALERRFQPVMVEEPTVEQTI--EILKGLRKVFEEHHHVKI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQK-----KKPQIEELE 381 T +E A+ R A D L D+A A L+ + +I+ LE Sbjct: 368 TDDALEAAAKLSARYITNRFLPDKAVD--LIDEAAAYVRLESSYPSEELLKLEEEIKNLE 425 Query: 382 SIV------------RLKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLK 429 + + E + + +E R++ E + Sbjct: 426 DKINDAVVKGEYEEAAKLKVELQKLKNEYEEKRKKQEKVEPVVDENVVAKIVEQWTGIPV 485 Query: 430 LRLSEAEERRQYLFEE 445 R+ E+E + EE Sbjct: 486 SRIMESEREKLLKLEE 501 >gi|69936536|ref|ZP_00631320.1| AAA ATPase, central region:Clp, N terminal [Paracoccus denitrificans PD1222] Length = 772 Score = 138 bits (348), Expect = 3e-31 Identities = 24/185 (12%), Positives = 57/185 (30%), Gaps = 18/185 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + D I +D + + + G + K Sbjct: 265 GTRYRGDFEERLKAVVKELEDHPDAILFIDEIHTVIGAGATSGGAMDASNLLKPALAGGK 324 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + + FQ+ D + P++ + ++ E ++ Sbjct: 325 LRCMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPTVPDTI--KILMGLKPSFEKHHDLRY 382 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKK----KPQIEELES 382 T +++ E R + A D + D+A A L E +++ +IE + + Sbjct: 383 TNDAIKMAVELSARYIHDRKLPDKAID--VIDEAGAAQHLVAESKRRKTIGPKEIEAVVA 440 Query: 383 IVRLK 387 + Sbjct: 441 KIARI 445 >gi|32043647|ref|ZP_00140909.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pseudomonas aeruginosa UCBPP-PA14] Length = 932 Score = 138 bits (348), Expect = 3e-31 Identities = 38/272 (13%), Positives = 76/272 (27%), Gaps = 49/272 (18%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKL--FWKADELIEK 273 F + + Q +I +D V I + L + + Sbjct: 331 GAKYRGEFEERLKQVMDELQAAQSEIILFIDEVHTIVGAGQGGGEGGLDVANVLKPAMAR 390 Query: 274 LKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + LI ++ + FQ P++E ++ E V Sbjct: 391 GEMNLIGATTLNEYQKYIEKDAALERRFQPVFVPEPTVEQTI--SILRGLRDKLEGHHKV 448 Query: 325 QDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV 384 AE R A D L D+ A +++ + +I+ELE+ + Sbjct: 449 TIRDEAFVAAAELSDRYIGNRFLPDKAID--LIDQ--AAARVRIASTSRPAEIQELEAEL 504 Query: 385 RLKQAEAD--MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL 442 + E D + DEA K + R+ E +E + + Sbjct: 505 AQLKREQDYAASRKWYDEA------------------------KVFEKRIQERKEHLEQI 540 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 E + + + +I ++ + Sbjct: 541 TERWQQTQ-----GSKTEEVRVEDIAEIISKL 567 >gi|9655617|gb|AAF94303.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Vibrio cholerae O1 biovar eltor str. N16961] Length = 756 Score = 138 bits (348), Expect = 4e-31 Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F K + I +D + I + G+ L+ K Sbjct: 259 GTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGK 318 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ+ D PSL++ ++ E V+ Sbjct: 319 LRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDT--TKILMGLKTKYEAHHDVRY 376 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLK-MERQKKKPQIEELESIVR 385 T + + E + + A D + D+A A L R+KK + E+ES+V Sbjct: 377 TNKALRAAVELSAKYINERHLPDKAID--VIDEAGARARLMPASRRKKTVGVAEIESMVA 434 Query: 386 LK 387 Sbjct: 435 KM 436 >gi|55247316|gb|EAA02030.2| ENSANGP00000013686 [Anopheles gambiae str. PEST] Length = 537 Score = 138 bits (347), Expect = 4e-31 Identities = 24/201 (11%), Positives = 55/201 (27%), Gaps = 17/201 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + I + + + Sbjct: 15 GTKYRGQFEERMKAIMSELEKNRDVILFIDELHTIVGAGSSTGSLDASNMFKPALARGEI 74 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ + ++E ++ E V T Sbjct: 75 QCIGATTLDEYRQYIEKDGALERRFQKVMVEPTTIEESI--QILNQIKDKYEEYHNVTYT 132 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 ++ R A D A + + ++ K +I E E + Sbjct: 133 DDAIKACVNLTARYITDRFLPDKAID----ALDEAGSRVYIKNMKVPTEIIEYEKAIEEV 188 Query: 388 QAEADMFQLKAD--EARREAE 406 + + D EAR+ + Sbjct: 189 KEQKQKAVKAQDYLEARKLKD 209 >gi|45436048|gb|AAS61604.1| putative ATPase subunit of ATP-dependent protease [Yersinia pestis biovar Medievalis str. 91001] Length = 880 Score = 138 bits (347), Expect = 4e-31 Identities = 21/223 (9%), Positives = 49/223 (21%), Gaps = 19/223 (8%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + ++ +D I A G + + + Sbjct: 290 EFEQRLKNVIEAVQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAA 349 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ D P ++ ++ V + Sbjct: 350 TTWSEYKQYFERDAALERRFQMVKVDEP--DDDTACLMLRGLKERYATHHGVHILDAAIT 407 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A D L D A A ++M + E+ + + E Sbjct: 408 AAVTLSRRFLTGRQLPDKAVD--LLDTAGA--RVRMSIDTLPTALMEINAELAALAMEQQ 463 Query: 393 MFQLKADEA---RREAEXXXXXXXXXXXXXXXXYTSKYLKLRL 432 + +Y + + Sbjct: 464 AIEQDLLLLPNVSSTRLPEIEQRRAALAVGQHTLEQQYKEEKR 506 >gi|51597920|ref|YP_072111.1| Clp ATPase [Yersinia pseudotuberculosis IP 32953] Length = 867 Score = 138 bits (347), Expect = 4e-31 Identities = 29/262 (11%), Positives = 66/262 (25%), Gaps = 21/262 (8%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F K A +I +D + G + + + + Sbjct: 273 EFEKRFKGIMAEIAQSTTPIILFIDEAHTLIGAGNQQGGLDISNLLKPALARGELKTIAA 332 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ PS + E ++ E A V ++ Sbjct: 333 TTWSEYKKYFEKDAALSRRFQLVKVSEPSAQ--EATIIMRGLRTVYEQAHGVLIDDEALQ 390 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 A R + A D A + + Q+ L++ + + E + Sbjct: 391 AAAVLSDRYISGRQLPDKAIDV----LDTAAARVAINLTSAPRQVSALKNELYHQGMEIE 446 Query: 393 MFQLKADE-ARR--EAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQYLFEELK 447 M + + R E + + K + + + R L + + Sbjct: 447 MLEREQRLSLSRPDERLSVLQQQRIEIEQQLIALNTGWEKQQHLVQQIIALRAVLLAQEE 506 Query: 448 AQENSQCDFDPMKMRMESEIRG 469 + + Q ++ Sbjct: 507 SATDEQVVNLTALSDELERLQQ 528 >gi|39936210|ref|NP_948486.1| endopeptidase Clp: ATP-binding chain A [Rhodopseudomonas palustris CGA009] Length = 794 Score = 138 bits (347), Expect = 4e-31 Identities = 29/202 (14%), Positives = 63/202 (31%), Gaps = 16/202 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + Q I +D + + + G + Sbjct: 264 GTRYRGDFEERLKQVLKELEAHPNAILFIDEIHTVIGAGATSGGAMDASNLLKPALASGT 323 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + ++ FQ+ D + P++E+ ++ E ++ Sbjct: 324 IRCMGSTTYKEYRQHFEKDRALVRRFQKIDVNEPTVEDAIA--ILKGLKPYFEDYHKLKY 381 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 T +E + R + A D + D++ A L E ++KK I+E+E+ V Sbjct: 382 TNEAIESAVQLSSRYIHDRKLPDKAID--VIDESGAAQMLLSENKRKKTIGIKEIEATVA 439 Query: 386 LK-QAEADMFQLKADEARREAE 406 + E + E Sbjct: 440 TMARIPPKSVSKDDAEVLKHLE 461 >gi|66870923|gb|EAL98287.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Arthrobacter sp. FB24] Length = 857 Score = 138 bits (347), Expect = 4e-31 Identities = 35/268 (13%), Positives = 75/268 (27%), Gaps = 47/268 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLF-WKADELIEKL 274 T F + + + I +D + + G + + Sbjct: 292 GTRYRGDFEERLTKAMDEVTANPGQFILFIDELHTVIGAGGAGEGGMDAGNILKPRLARG 351 Query: 275 KSKLIDPL--------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ P++E+ +++ E V+ Sbjct: 352 ELHVVGATTFNEYRKVEKDPAFERRFQPVQVGEPAVED--AVQILSGLRERYEEHHGVRY 409 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 T + E R A D L D+A A LK+ ++ + E +V L Sbjct: 410 TDEAVRAAVELSARYVTDRFLPDKAID--LMDQAGARLSLKLGSRQDAAALR--ERLVAL 465 Query: 387 KQAEADMFQLKA-DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 ++++ + + A R + EA ++ L Sbjct: 466 EESKTAAIAAEDFEAASRLRD---------------------------EANALKEKLDGG 498 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLKG 473 +QE + E+EI ++ Sbjct: 499 AASQE---GPGSESAVVGEAEIAEIISR 523 >AAA_CLPB_202-397_PF00004.17 Length = 196 Score = 138 bits (347), Expect = 4e-31 Identities = 15/148 (10%), Positives = 38/148 (25%), Gaps = 13/148 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKL 274 F + + A D ++ +D + + ++ + Sbjct: 48 GAKYRGEFEERLKTVLAEIKDSDGQVVTFIDELHTVVGAGAGGDSAMDAGNMLKPMLARG 107 Query: 275 KS---------KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + + + ++ + FQ+ P++E+ ++ E VQ Sbjct: 108 ELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDSIA--ILRGLKGRYEAHHKVQ 165 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 IADSALVAAASLSDRYITSRFLPDKAID 193 >gi|46192559|ref|ZP_00006423.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rhodobacter sphaeroides 2.4.1] Length = 739 Score = 138 bits (347), Expect = 5e-31 Identities = 30/202 (14%), Positives = 62/202 (30%), Gaps = 16/202 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + D I +D + + + G ++ K Sbjct: 233 GTRYRGDFEERLKAVVKEMEDHPDAILFIDEIHTVIGAGATSGGAMDASNLLKPALQGGK 292 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + + FQ+ D + PS+E+ ++ E ++ Sbjct: 293 LRCMGSTTYKEYRQHFEKDRALSRRFQKIDVNEPSVEDT--VKILMGLKPYFEEHHDLRY 350 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD-LKMERQKKKPQIEELESIVR 385 T + E R + A D + D+A A L +++K E+E++V Sbjct: 351 TQDAIRTAVELSARYIHDRKLPDKAID--VIDEAGAAQHLLADSKRRKTIGPREIEAVVA 408 Query: 386 LK-QAEADMFQLKADEARREAE 406 + E R+ E Sbjct: 409 KIARIPPKSVSKDDAEVLRDLE 430 >gi|48864938|ref|ZP_00318807.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Oenococcus oeni PSU-1] Length = 823 Score = 138 bits (347), Expect = 5e-31 Identities = 21/185 (11%), Positives = 52/185 (28%), Gaps = 15/185 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 256 GTKYRGEFEDRLKKIINEIHQDGQVILFIDELHTLIGAGGAEGALDASNLLKPALARGEL 315 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I +++ + F D PS E+ ++ E V + Sbjct: 316 QTIGATTFDEYQKYIESDQALERRFASVTIDEPSQED--SVEILKGLRPRYEEHHRVNIS 373 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + + R A D L D A ++++ + + + +LE + Sbjct: 374 DEAINAAVKLSSRYIADRFLPDKAID--LMD--EAAAKVRIDTVQPEDKKVDLERQLNGL 429 Query: 388 QAEAD 392 + + D Sbjct: 430 RDQLD 434 >gi|71550791|ref|ZP_00670876.1| AAA ATPase, central region:Clp, N terminal [Nitrosomonas eutropha C71] Length = 756 Score = 137 bits (346), Expect = 5e-31 Identities = 29/180 (16%), Positives = 54/180 (30%), Gaps = 15/180 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F + + D I +D + + + G + + Sbjct: 255 GTKYRGDFEQRLKAVLKQLTDNPKAILFIDEIHTLIGAGAASGGTLDASNLLKPALSSGQ 314 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K I + + + FQ+ D P + ++ + E V+ Sbjct: 315 LKCIGATTYNEYRGIFEKDHALSRRFQKIDISEPDISET--VEILRGLKSRYEKHHNVRY 372 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD-LKMERQKKKPQIEELESIVR 385 T + AE R A D + D+A A L RQ+K +E+E ++ Sbjct: 373 TEVALTAAAELSARFINDRHLPDKAID--VIDEAGAAQRVLPKSRQRKIIGKQEIEHVIA 430 >gi|67638450|ref|ZP_00437386.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Burkholderia mallei 10399] Length = 1048 Score = 137 bits (346), Expect = 5e-31 Identities = 26/188 (13%), Positives = 56/188 (29%), Gaps = 16/188 (8%) Query: 223 GFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + A ++ +D + A + + + Sbjct: 276 EFEQRLKRVIAEIRASQTPVVLFIDEAHTLIGAGGAAGASDAANLLKPALARGELRTIAA 335 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ DSP + ++ + A V + Sbjct: 336 TTWSEYKKYFEKDAALARRFQPVKLDSPDV--ATSVMILRGLKERYQDAHGVTIRDDALV 393 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R + A D L D ACA ++ +Q K +E+ + ++ + E Sbjct: 394 AAAELSARYITGRQLPDKAID--LLDTACARVKVR--QQTKPAALEDAQRAIQALERERR 449 Query: 393 MFQLKADE 400 + + E Sbjct: 450 ALRDELAE 457 >AAA_Q7XYJ0_3-191_PF00004.17 Length = 189 Score = 137 bits (346), Expect = 5e-31 Identities = 15/147 (10%), Positives = 38/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGS-EDARGKKLFWKADELIEKLK 275 F + + + +I +D + I G ++ + + Sbjct: 45 GAKYRGEFEERLKAVINEVKEDGTIILFIDEIHTIVGAGKAGDSGMDAGNLLKPMLARGE 104 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I ++ + FQ+ + P+ E ++ E+ V+ Sbjct: 105 LRCIGATTVDEYRQYMEKDAALERRFQQVMVEEPTPEETI--SILRGLCEKYELFHKVRI 162 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + R A D Sbjct: 163 SDDSLIEAVRLSDRYIADRFLPDKAID 189 >gi|56679738|gb|AAV96404.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Silicibacter pomeroyi DSS-3] Length = 775 Score = 137 bits (346), Expect = 5e-31 Identities = 28/182 (15%), Positives = 62/182 (34%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + D + +D + + + G ++ K Sbjct: 268 GTRYRGDFEERLKAVVNELEDHPDAVLFIDEIHTVIGAGATSGGAMDASNLLKPALQGGK 327 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + + FQ+ D + P++E+ ++ E V+ Sbjct: 328 LRTMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPTVED--SVKILKGLKPYFEEHHEVRY 385 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 TA ++ E R + A D + D+A A L E +++K ++E+E++V Sbjct: 386 TADAIKSAVELSARYINDRKLPDKAID--VIDEAGAAQHLVAESKRRKTIGVKEIEAVVA 443 Query: 386 LK 387 Sbjct: 444 KI 445 >gi|67914429|gb|EAM63773.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chlorobium phaeobacteroides BS1] Length = 853 Score = 137 bits (346), Expect = 6e-31 Identities = 25/237 (10%), Positives = 60/237 (25%), Gaps = 34/237 (14%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + I + + + + Sbjct: 269 GTKYRGQFEERMKALMNELERSRDVILFIDELHTIVGAGGASGSLDASNIFKPALARGEL 328 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ + +++ ++ + E V Sbjct: 329 QCIGATTLDEYRQYIEKDGALDRRFQKIMVEPTNVDETI--QILNNIKSKYEAHHHVYYD 386 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 + ++ R A D A + + I +LE V Sbjct: 387 SDAIDKAVRLSERYITDRFLPDKAIDV----MDEAGARVHLSNIHVPKNILDLEQSVEEI 442 Query: 388 QAEADMFQLKA--DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL 442 + E + +EA + K L L +A++ + Sbjct: 443 KTEKNRVVKMQNFEEAAMLRD-----------------KEKTLLESLEQAKQEWEAR 482 >AAA_Q7NKD6_211-405_PF00004.17 Length = 195 Score = 137 bits (346), Expect = 6e-31 Identities = 14/143 (9%), Positives = 35/143 (24%), Gaps = 12/143 (8%) Query: 221 LFGFVKDVFQHCAP-NWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLI 279 F + + ++ +D + + G + + + + I Sbjct: 52 RGEFEERLKGVMQEVIASKGQIVLFIDELHTLVGAGASEGGMDAANLLKPALARGELQCI 111 Query: 280 DP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARK 330 ++ + FQ PS++ ++ E ++ T Sbjct: 112 GATTLDEYRKHIERDAALERRFQPVTVGEPSVDEAIA--ILQGLKVRYEEHHKLRYTDAA 169 Query: 331 MEVVAEEKMRMFKKARSVLDACD 353 +E R A D Sbjct: 170 LEAAVRLSDRYIADRFLPDKAID 192 >gi|228154|prf||1717391A protein Hsp104 Length = 908 Score = 137 bits (345), Expect = 6e-31 Identities = 37/276 (13%), Positives = 78/276 (28%), Gaps = 28/276 (10%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALI-KELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + LI +D + + +D + + + Sbjct: 254 GAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKD----DAANILKPALSRGQ 309 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K+I + FQ+ + PS+ ++ EI V+ Sbjct: 310 LKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVA--ILRGLQPKYEIHHGVRI 367 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRL 386 + A+ R R A D L D +CA + + R K +++ E + Sbjct: 368 LDSALVTAAQLAKRYLPYRRLPDSALD--LVDISCAG--VAVARDSKPEELDSKEQSI-A 422 Query: 387 KQAEADMFQLKADEAR---REAEXXXXXXXXXXXXXXXXYTSKYLKLR--LSEAEERRQY 441 + D + E R + +Y + + E + ++ Sbjct: 423 IDSSRDKSSRERVECRLHTKRKLKLARQKEASLQEELEPLRQRYNEEKHGHEELTQAKKK 482 Query: 442 LFEELKAQENSQCDFD--PMKMRMESEIRGLLKGME 475 L E ++ +D I + K +E Sbjct: 483 LDELENKALVAERRYDTRTAADLRYFAIPDIKKQIE 518 >AAA_Q92D24_133-325_PF00004.17 Length = 193 Score = 137 bits (345), Expect = 6e-31 Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 10/141 (7%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + Q + + I +D V I + + ++I Sbjct: 52 RGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQMIG 111 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ + PS E ++ + E V + ++ Sbjct: 112 ATTLKEYRTIEKDAALERRFQPVTVNEPSNEETLT--ILNGLKSKYEDFHEVVYSPEALK 169 Query: 333 VVAEEKMRMFKKARSVLDACD 353 E R + A D Sbjct: 170 AAVELSSRYIQDRHLPDKAID 190 >gi|16126707|ref|NP_421271.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Caulobacter crescentus CB15] Length = 776 Score = 137 bits (345), Expect = 7e-31 Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 16/202 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + Q + + +D + + + G + Sbjct: 268 GTRYRGDFEERLKQVVKELENHPNAVLFIDEIHTVIGAGATSGGAMDASNLLKPALASGT 327 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + ++ FQ+ D + P++E+ ++ E ++ Sbjct: 328 LRCMGSTTYKEFRQHFEKDRALVRRFQKIDVNEPTVEDTI--KILKGLKTYYEDFHKLKY 385 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 TA ++V E + + A D + D+A A L E R+KK ++E+ES+V Sbjct: 386 TADALKVAVELSAKYITDRKLPDKAID--VIDEAGASQMLLPESRRKKTIGVKEIESVVA 443 Query: 386 LK-QAEADMFQLKADEARREAE 406 + EA +E E Sbjct: 444 KIARIPPKSVSKSDTEALKELE 465 >gi|46580013|ref|YP_010821.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough] Length = 776 Score = 137 bits (345), Expect = 7e-31 Identities = 26/182 (14%), Positives = 51/182 (28%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + I +D + I + G ++ Sbjct: 253 GTKYRGDFEARLKAVISELSRQPDAILFIDEIHTIVGAGATSGGSMDASNILKPVLASGA 312 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ+ D P+ E E ++ E V+ Sbjct: 313 IRCIGSTTHEEYRNHFEKDRALSRRFQKIDIGEPTQE--ECVEILKGLKEHYEEHHAVRY 370 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKM-ERQKKKPQIEELESIVR 385 T + E R A D + D+A A L+ + ++++E +V Sbjct: 371 TLPALRAAVELSARYVNDRLLPDKAID--VIDEAGAAMRLRAGFKPGASVSVQDVERVVA 428 Query: 386 LK 387 Sbjct: 429 RM 430 >AAA_Q8F906_213-406_PF00004.17 Length = 194 Score = 137 bits (345), Expect = 8e-31 Identities = 15/146 (10%), Positives = 40/146 (27%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 48 GTKYRGEFEERLKKIMKEITSSTNIIIFIDELHTLIGAGAAEGAVDAANILKPALARGEL 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + + FQ PS+++ ++ E V+ + Sbjct: 108 QCIGATTSAEYRKYIEKDSALERRFQVVKVAEPSVDD--AIQILQGLKKAYETHHKVRYS 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + +E + R A D Sbjct: 166 DKALEQSVKLSHRYINDRYLPDKAID 191 >gi|73748009|ref|YP_307248.1| ATP-dependent Clp protease, ATP-binding subunit [Dehalococcoides sp. CBDB1] Length = 824 Score = 137 bits (345), Expect = 8e-31 Identities = 29/267 (10%), Positives = 74/267 (27%), Gaps = 46/267 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + +I +D + + + + Sbjct: 252 GTKYRGEFEERLKKVIEEIKNAGNIILFIDEFHTMVGAGAAEGAVDAANILKPSLARGEV 311 Query: 277 KLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 ++I + + FQ + P++E+ ++ E + + Sbjct: 312 QVIGATTLDDFRKYVERDAALERRFQPVLVEEPAIEDTL--SILRGIKERYEEHHKLIIS 369 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR-- 385 + A R A D L D A + ++++++ K ++E+++I Sbjct: 370 DEAIIAAANMAARYIPDRFLPDKAID--LVD--EAASRVRIKKRTKPVSLKEMKAIEDSY 425 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE 445 + EA + + D A E + E+ Sbjct: 426 RRDKEAALATQQYDYASELRE-------------------------RELQIAEKIRRMED 460 Query: 446 LKAQENSQCDFDPMKMRMESEIRGLLK 472 E + + E +I ++ Sbjct: 461 EWQTEQAMDK----PVVGEEDIAQVVS 483 >gi|53804153|ref|YP_114227.1| ATP-dependent Clp protease, ATP-binding subunit ClpA [Methylococcus capsulatus str. Bath] Length = 756 Score = 136 bits (344), Expect = 8e-31 Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 18/185 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F K + A I +D + I + G ++ + Sbjct: 258 GTKYRGDFEKRLKSLLAQLKKEPNAILFIDEIHTIIGAGSASGGVMDASNLIKPVLASGE 317 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ+ D PS+E ++ E V+ Sbjct: 318 LRCIGSTTYQEYRGIFEKDRALARRFQKIDIPEPSVEET--YQILKGLKTRFEQHHDVKY 375 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKP----QIEELES 382 + + E R A D + D+A A L ++KK IE++ S Sbjct: 376 SLAALRTAVELSDRYINDRHLPDKAID--VIDEAGANQRLLPPSRRKKTIGTVDIEDIVS 433 Query: 383 IVRLK 387 + Sbjct: 434 KIARI 438 >gi|69933402|ref|ZP_00628604.1| AAA ATPase, central region:Clp, N terminal [Paracoccus denitrificans PD1222] Length = 953 Score = 136 bits (344), Expect = 9e-31 Identities = 33/271 (12%), Positives = 68/271 (25%), Gaps = 47/271 (17%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGK--KLFWKADELIEK 273 + F + V Q + L+ +D V I + + + + Sbjct: 339 GSKYRGEFEERVKQLMDEITARKDELVLFIDEVHTIVGAGQGGGEGGLDIANTFKPAMAR 398 Query: 274 LKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + LI ++ + FQ PS++ ++ E V Sbjct: 399 GEMNLIGATTLAEYQKYIEKDAALEHRFQPVLVPEPSVDQTI--NILRGLRDSMEAHHKV 456 Query: 325 QDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV 384 + AE R A D L D+ A + + + ++E E+ + Sbjct: 457 TILDEALVAAAELSDRYISGRFLPDKAID--LIDQ--AAARVHLSTTSRPADLQEAEAEI 512 Query: 385 RLKQAEAD-MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLF 443 + E K + +E E R+ Sbjct: 513 AGLRREQAYATSRKNFDKAKEFEARIG---------------------------EREKDL 545 Query: 444 EELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 EE + +I ++ + Sbjct: 546 EERTDAWKA-RVGSSSAEVQVGDIADIVSKL 575 >gi|71893457|ref|YP_278903.1| ATP-dependent protease binding protein [Mycoplasma hyopneumoniae J] Length = 727 Score = 136 bits (344), Expect = 9e-31 Identities = 36/273 (13%), Positives = 80/273 (29%), Gaps = 28/273 (10%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKL 274 S F K + + +I +D + + ++ + Sbjct: 130 GASFKGEFEKRIKAILQEIEQNSDQVIIFIDEIHLLIGTGSSGTDSMDFANILKPIMARG 189 Query: 275 KSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + KLI ++ + Q+ + PS+ + ++ E V+ Sbjct: 190 QIKLIGATTNSEYRLYIEKDGALERRMQKVEILEPSVIDTI--NILRGIKERLENFHQVK 247 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 + + R A D L D A LK+E + ++E+ + + Sbjct: 248 IKDSALVFATKAANRYIFDRFLPDKAID--LVD--EAAASLKVEINYQPEKLEKAKRELI 303 Query: 386 LKQAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAE-ERRQYLFE 444 + E Q + + + ++ + + S +E E Sbjct: 304 YLKMEEINSQKQDNSELKSK-------IENLENEVKKLQDQWDQSKKSASEIASLSQELE 356 Query: 445 ELKAQEN---SQCDFDPMKMRMESEIRGLLKGM 474 +LK Q+N Q D+ +I + K + Sbjct: 357 KLKYQQNYLMEQGDYQKAAEIKYGKIPKISKKL 389 >AAA_Q9XEI1_205-399_PF00004.17 Length = 195 Score = 136 bits (344), Expect = 9e-31 Identities = 16/147 (10%), Positives = 37/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQ 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + FQ+ PS+ + ++ E V+ Sbjct: 108 LRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTI--SILRGLKEKYEGHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 R + V A+ R A D Sbjct: 166 QDRAIVVAAQLSARYIMGRHLPDKAID 192 >gi|52858081|ref|ZP_00046852.2| COG0542: ATPases with chaperone activity, ATP-binding subunit [Lactobacillus gasseri] Length = 6623 Score = 136 bits (344), Expect = 9e-31 Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 17/191 (8%) Query: 224 FVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK---KLFWKADELIEKLKSKLID 280 F + + + + +I +D + I + + ++I Sbjct: 149 FEEKLKKIIDKAKGDKNVILFIDELHNIVGAGSTDSENNSGDAANILKPALASGEIRVIG 208 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P++E+ ++ E V+ ++ Sbjct: 209 ATTTSEYQQIEKDPALARRFQPVQVPEPTIED--AVQILKGLAPRYEKYHNVKYDPEALK 266 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + AE R A D L D+A A L M+ QK + I+ + K+AEA Sbjct: 267 LAAELSNRYINDRHLPDKAID--LMDEAGAKKSLGMD-QKDETSIKNKIHALEGKKAEA- 322 Query: 393 MFQLKADEARR 403 K DEA + Sbjct: 323 AKNEKYDEAAK 333 >gi|32043234|ref|ZP_00140496.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pseudomonas aeruginosa UCBPP-PA14] Length = 902 Score = 136 bits (344), Expect = 9e-31 Identities = 29/276 (10%), Positives = 71/276 (25%), Gaps = 28/276 (10%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + Q E +I +D + A + + Sbjct: 285 EFEQRLRQVIEDVQSSEKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAA 344 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + ++ + FQ D PS + ++ + E VQ +E Sbjct: 345 TTWAEYKKHIEKDPALTRRFQVVQVDEPS--EHKAILMMRGVASTMEKHHQVQILDEALE 402 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + + L D ACA T + + ++++ + + E Sbjct: 403 AAVRLSHRYIPARQLPDKSVS--LLDTACARTAISL--HAVPAEVDDSRRRIEALETELA 458 Query: 393 MFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQ- 449 + + ++ A E + ++ + + E A+ Sbjct: 459 IIRRESAIGVATAERQRNAETLLAEERERLAALEQRWAEEKRLVDELLETRARLRAAAEA 518 Query: 450 ---------ENSQCDFDPMKMRMESEIRGLLKGMEM 476 E + + + + + L + Sbjct: 519 VDAGGAPLGEGEARLDEEQRQALHARLAELQAQLSA 554 >AAA_Q7NRW0_214-408_PF00004.17 Length = 195 Score = 136 bits (344), Expect = 1e-30 Identities = 21/147 (14%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F + + D I +D + + + G + Sbjct: 48 GTKYRGDFEQRLKAVIKQLTDDTNAILFIDEIHTLIGAGAASGGTLDASNLLKPALSNGS 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + N + FQ+ D P++E ++ + E V+ Sbjct: 108 LRCIGATTYNEYRGIFEKDNALSRRFQKIDVTEPTVEQT--VEILKGLKSRFEAHHGVKY 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + AE R A D Sbjct: 166 TQSALSTAAELSARYINDRHLPDKAID 192 >gi|51209900|ref|YP_063564.1| Clp protease ATP binding subunit [Gracilaria tenuistipitata var. liui] Length = 823 Score = 136 bits (344), Expect = 1e-30 Identities = 25/203 (12%), Positives = 57/203 (28%), Gaps = 19/203 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + ++ +D V + + + + Sbjct: 252 GTKYRGEFEERLKRIMDEIKSANNIVLVIDEVHTLIGAGAAEGAIDAANLLKPALARGEL 311 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ PS+E ++ E ++ + Sbjct: 312 QCIGATTLEEYRKHIEKDAALERRFQPVLVGEPSVEETI--EILFGLRDRYEKHHQLKMS 369 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR-- 385 + A+ + A D L D A + +++ + P EL+ +R Sbjct: 370 DEALAAAAKYANQYISDRFLPDKAID--LID--EAGSRVRLLNSQLPPAARELDKELRSV 425 Query: 386 --LKQAEADMFQLKADEARREAE 406 K + + E R E Sbjct: 426 LKTKDEAIRAQKYEKAEQYRTRE 448 >AAA_Q9SPH4_204-398_PF00004.17 Length = 195 Score = 136 bits (343), Expect = 1e-30 Identities = 15/147 (10%), Positives = 37/147 (25%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + ++ + + Sbjct: 48 GAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLFKPMLARGQ 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + FQ+ PS+ + ++ E V+ Sbjct: 108 LRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVPDT--VSILRGLKEKYEGHHGVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 R + + A+ R A D Sbjct: 166 QDRALVIAAQLSSRYIMGRHLPDKAID 192 >gi|67930508|ref|ZP_00523680.1| AAA ATPase, central region:Clp, N terminal [Solibacter usitatus Ellin6076] Length = 890 Score = 136 bits (343), Expect = 1e-30 Identities = 22/242 (9%), Positives = 54/242 (22%), Gaps = 23/242 (9%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + +I +D + A + + + Sbjct: 279 EFENRLKSLVEEVKSSPTPIILFIDEAHTMIGAGGTAGQNDAANILKPALARGELRTIAA 338 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + P+ + ++ E V+ + Sbjct: 339 TTWSEYKKYFEKDPALARRFQVVKVEEPT--EAKCQVMLRGLVPVLEKHHNVRILDEGLV 396 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A A L + + P IE+ + + Sbjct: 397 AAVKFSHRYLADRQLPDKAVSV----LDTACARLSLGQNATPPAIEDAIRQIDDCTVQTR 452 Query: 393 MFQLKADEARREAE--XXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQE 450 + + ++ AE ++ K R + E E Sbjct: 453 ILERESALGADHAEGLAALAKQKAAEEGRLADLQQRWQKERD-----LVGKIREVRGKLE 507 Query: 451 NS 452 + Sbjct: 508 TA 509 >gi|68213583|ref|ZP_00565414.1| AAA ATPase, central region:Clp, N terminal [Methylobacillus flagellatus KT] Length = 763 Score = 136 bits (343), Expect = 1e-30 Identities = 32/181 (17%), Positives = 55/181 (30%), Gaps = 15/181 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F + + D I +D + + + G + Sbjct: 256 GTKYRGDFEQRLKAVMKKLADQPGAILFIDEIHTLIGAGAASGGTLDASNLLKPALSNGS 315 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K I + + + FQ+ D PS+ ++ + E V+ Sbjct: 316 LKCIGATTYQEFRGIFEKDHALSRRFQKVDVVEPSVSET--VEILKGLKSRFEKHHSVKY 373 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD-LKMERQKKKPQIEELESIVR 385 TA + AE R A D + D+A A L +QKK +E+E I+ Sbjct: 374 TASALNTAAELSARYINDRHLPDKAID--VIDEAGAAQRILPKSKQKKVIGNKEIEDIIA 431 Query: 386 L 386 Sbjct: 432 K 432 >gi|73542437|ref|YP_296957.1| AAA ATPase, central region:Clp, N terminal [Ralstonia eutropha JMP134] Length = 765 Score = 136 bits (343), Expect = 1e-30 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F + + D I +D + + + G + + Sbjct: 257 GTKYRGDFEQRLKGVLKSLKDNPNAILFIDEIHTLIGAGAASGGTLDASNLLKPALSSGQ 316 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K I + + FQ+ D PS++ ++ + E V+ Sbjct: 317 LKCIGATTFTEYRGIFEKDAALSRRFQKIDVVEPSVDQT--VQILRGLKSRFEEHHGVKY 374 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 + + AE R A D + D+A A + + +QKK E+E IV Sbjct: 375 ASSALTAAAELSARFITDRHLPDKAID--VIDEAGAAQRILPKSKQKKTIGKSEIEDIVS 432 Query: 386 LK 387 Sbjct: 433 RI 434 >gi|68552573|ref|ZP_00591961.1| UvrB/UvrC protein:AAA ATPase, central region:Clp, N terminal [Prosthecochloris aestuarii DSM 271] Length = 906 Score = 136 bits (343), Expect = 1e-30 Identities = 23/201 (11%), Positives = 53/201 (26%), Gaps = 17/201 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + I + + + + Sbjct: 326 GTKYRGQFEERMKALMNELERSRDVILFIDELHTIIGAGGASGSLDASNIFKPALARGEL 385 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ+ + S++ ++ + E V Sbjct: 386 QCIGATTLDEYRQYIEKDGALDRRFQKIMVEPTSVDETI--QILHNIKSKYESHHHVHFD 443 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E + R A D A + + I +LE + Sbjct: 444 DNAIEKAVKLAERYITDRYLPDKAIDV----MDEAGARVHLSNIHVPQNILDLEKAIEEV 499 Query: 388 QAEADMFQLKA--DEARREAE 406 +AE + +EA + Sbjct: 500 KAEKNKVVRMQNFEEAAMLRD 520 >AAA_CLPB_199-393_PF00004.17 Length = 195 Score = 136 bits (342), Expect = 1e-30 Identities = 13/147 (8%), Positives = 33/147 (22%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNW-DFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + +I +D + + + + + + Sbjct: 48 GAKYKGEFEERLKAVVNEVTGAEGEIILFIDEIHTLVGAGKSEGAMDAANILKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ D P + ++ E V+ Sbjct: 108 LRAIGATTLDEYRKYFEKDKALERRFQMVMVDEP--DELSSISILRGLKEKYENHHKVRI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 + + R + A D Sbjct: 166 KDDAIIAAVKLSHRYITERFLPDKAID 192 >gi|23009988|ref|ZP_00050835.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Magnetospirillum magnetotacticum MS-1] Length = 445 Score = 136 bits (342), Expect = 1e-30 Identities = 25/182 (13%), Positives = 57/182 (31%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + Q I +D + + + G + Sbjct: 116 GTRYRGDFEERLKQVMKEIEAHPNAIMFIDEIHTVIGAGATSGGAMDASNLLKPALASGA 175 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + ++ FQ+ D + PS+ + ++ E ++ Sbjct: 176 LRCIGSTTYKEYRQYFEKDRALVRRFQKIDVNEPSIPDTI--EILKGLKPYFEEFHKLKY 233 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKP-QIEELESIVR 385 T ++ E R + A D + D+ A L E ++K+ ++E+E+ + Sbjct: 234 TTDAVKAAVELSARYINDRKLPDKAID--VIDETGASQMLVPEARRKRTIGVKEIETTIA 291 Query: 386 LK 387 Sbjct: 292 TM 293 >gi|27380264|ref|NP_771793.1| ClpA-like protein [Bradyrhizobium japonicum USDA 110] Length = 802 Score = 136 bits (342), Expect = 1e-30 Identities = 28/202 (13%), Positives = 64/202 (31%), Gaps = 16/202 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + Q I +D + + + G + Sbjct: 264 GTRYRGDFEERLKQVLKELEAHPNAILFIDEIHTVIGAGATSGGAMDASNLLKPALASGT 323 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + ++ FQ+ D + P++E+ ++ E ++ Sbjct: 324 IRCMGSTTYKEYRQHFEKDRALVRRFQKIDINEPTVEDAIA--ILKGLKPYFEDYHRLKY 381 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 T +E + R + A D + D++ A L E ++KK I+E+E+ + Sbjct: 382 TNEAIEAAVQLSSRYIHDRKLPDKAID--VIDESGAAQMLVAENKRKKTIGIKEIETTIA 439 Query: 386 -LKQAEADMFQLKADEARREAE 406 + + E + E Sbjct: 440 SMARIPPKSVSKDDAEVLKHLE 461 >gi|56414609|ref|YP_151684.1| ClpB-like protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] Length = 887 Score = 136 bits (342), Expect = 1e-30 Identities = 23/253 (9%), Positives = 57/253 (22%), Gaps = 27/253 (10%) Query: 223 GFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + +I +D V + + + + + I Sbjct: 287 EFESRLKGLLEEAGRSPQPVILFVDEVHTLVGAGGASGTGDAANLLKPALARGTLRTIGA 346 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P E ++ E V + Sbjct: 347 TTWSEYKRHIEKDPALTRRFQVLQIAEP--EEIPAMEMVRGLVDTLEKHHNVLILDEAVR 404 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 + R + A A + + ++ L ++ + E Sbjct: 405 AAVQLSHRYIPARQLPDKAIS----LLDTAAARVALTLHTPPASVQFLRQQLKAAEMERS 460 Query: 393 MFQLKAD--EARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEE----- 445 + Q + E S++ + L ++ E Sbjct: 461 LLQKQEKMGIQSDERRDALTARIFSLNDELTASESRWQRE-LELVHTLQELRLVEPDADD 519 Query: 446 ---LKAQENSQCD 455 L+ E + + Sbjct: 520 KTTLQQAETALRE 532 >AAA_Q873Z4_139-332_PF00004.17 Length = 194 Score = 136 bits (342), Expect = 2e-30 Identities = 14/146 (9%), Positives = 39/146 (26%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + + +I +D + + + + + + Sbjct: 48 GAKFRGDFEERLKSVLKEVEEAKKGVILFVDELHTLLGLGKAEGSIDASNLLKPALSRGE 107 Query: 276 SKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 +L ++ + FQ P++++ ++ E+ V+ T Sbjct: 108 LQLCGATTLSEYRQIEKDAALARRFQPIQVGEPTVQDTI--SILRGIKERYEVHHGVRIT 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + A R A D Sbjct: 166 DNALVAAASYSNRYITDRFLPDKAID 191 >gi|68540122|ref|ZP_00579887.1| AAA ATPase, central region:Clp, N terminal [Sphingopyxis alaskensis RB2256] Length = 779 Score = 136 bits (342), Expect = 2e-30 Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + Q I +D + + + G + Sbjct: 263 GTRYRGDFEERLKQVVTELEGLPHAILFIDEIHTVIGAGATSGGAMDASNLLKPALSGGV 322 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + +L FQ+ D P+LE+ ++A + E V+ Sbjct: 323 IRCIGSTTYKEFRNHFEKDRALLRRFQKIDVVEPTLEDT--KKILAGLRSAFEAHHQVRY 380 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDL-KMERQKKKPQIEELESIVR 385 T + + R + A D + D+ A+ L ++KK E+E+++ Sbjct: 381 TPDAINAAVDLSARYINDRKLPDKAID--VIDEVGAMQMLVAPSKRKKTITAREIEAVIA 438 Query: 386 LK 387 Sbjct: 439 TM 440 >AAA_Q65KI8_112-304_PF00004.17 Length = 193 Score = 135 bits (341), Expect = 2e-30 Identities = 15/141 (10%), Positives = 37/141 (26%), Gaps = 10/141 (7%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + Q + + I +D + + + + + ++I Sbjct: 52 RGQFEERMKQLMKELKERKNAILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIG 111 Query: 281 P--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ P++E ++ E V T ++ Sbjct: 112 ATTLKEYRQIEKDAALERRFQPIMVHEPTIEQAAA--ILNGLKEKYEAYHDVTYTDEAIK 169 Query: 333 VVAEEKMRMFKKARSVLDACD 353 R + A D Sbjct: 170 ACVILSSRYIQDRHLPDKAID 190 >gi|22127238|ref|NP_670661.1| putative protease [Yersinia pestis KIM] Length = 882 Score = 135 bits (341), Expect = 2e-30 Identities = 20/223 (8%), Positives = 48/223 (21%), Gaps = 19/223 (8%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + + ++ +D I A G + + + Sbjct: 290 EFEQRLKNVIEAVQQSPSPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAA 349 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ D P ++ ++ V + Sbjct: 350 TTWSEYKQYFERDAALERRFQMVKVDEP--DDDTACLMLRGLKERYATHHGVHILDAAIT 407 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A D L D A A ++M + + + + E Sbjct: 408 AAVTLSRRFLTGRQLPDKAVD--LLDTAGA--RVRMSIDTLPTALMAINAELAALAMEQQ 463 Query: 393 MFQLKADEA---RREAEXXXXXXXXXXXXXXXXYTSKYLKLRL 432 + +Y + + Sbjct: 464 AIEQDLLLLPNVSSTRLPEIEQRRAALAVGQHTLEQQYKEEKR 506 >AAA_Q93CX3_212-405_PF00004.17 Length = 194 Score = 135 bits (341), Expect = 2e-30 Identities = 14/146 (9%), Positives = 35/146 (23%), Gaps = 11/146 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + +I +D + + + + + Sbjct: 48 GTKYRGEFEDRLKKIIEEIHEDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGEL 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 +LI ++ + F D P+ E+ ++ E + + Sbjct: 108 QLIGATTLDEYQKYIEKDAALERRFATVTVDEPTPED--AEQILRGLRPRYEEHHGITIS 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACD 353 + R A D Sbjct: 166 DEALHEAVVLANRYITNRFLPDKAID 191 >gi|47574776|ref|ZP_00244811.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rubrivivax gelatinosus PM1] Length = 768 Score = 135 bits (341), Expect = 2e-30 Identities = 24/185 (12%), Positives = 57/185 (30%), Gaps = 18/185 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F + + + + +D + + + G + + Sbjct: 262 GTKYRGDFEQRLKGVLKALKEQPHAVLFIDEIHTLIGAGAASGGTLDASNLLKPALGSGQ 321 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K I + + FQ+ D PS+E ++ + E V+ Sbjct: 322 LKCIGATTFTEYRGIFEKDAALSRRFQKVDVVEPSVEQTI--EILKGLKSRFEEHHSVKY 379 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKK----KPQIEELES 382 ++ AE + A D + D+A A + + ++K + ++EE+ + Sbjct: 380 ALGALQAAAELSAKFINDRHLPDKAID--VIDEAGAAQRILPKSKQKKTINRAEVEEIVA 437 Query: 383 IVRLK 387 + Sbjct: 438 KIARI 442 >gi|32041712|ref|ZP_00139295.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Pseudomonas aeruginosa UCBPP-PA14] Length = 877 Score = 135 bits (341), Expect = 2e-30 Identities = 30/270 (11%), Positives = 66/270 (24%), Gaps = 24/270 (8%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + + I +D + A G + + + Sbjct: 261 EFERRLKGVIDEVKAAPRPTILFIDEAHTLIGAGGQAGGSDAANLLKPALARGELRTIAA 320 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ PS+ E ++ E + + + Sbjct: 321 TTWAEYKKYFEKDPALARRFQPVQLHEPSV--AEAVTILRGLARVYEESHGIYLRDDAVV 378 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R + A D A +++ +E L + + + Sbjct: 379 AAAELSARYLAGRQLPDKAVDV----LDTACARVRISLAAAPESLERLRGELAEGERQRQ 434 Query: 393 MFQLKA--------DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFE 444 + A D + E + L RL ++ E Sbjct: 435 ALRRDAEAGLPIDHDALQALEERLAQAESERHVQEDQWSRQRELAERLLALRQQLARARE 494 Query: 445 ELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 + ++ S+ D + + L K + Sbjct: 495 ANREEQGSEADAEAFPADEHGGVEALEKAL 524 >gi|14583098|gb|AAK69758.1| CDPK adapter protein 1 [Mesembryanthemum crystallinum] Length = 479 Score = 135 bits (340), Expect = 2e-30 Identities = 60/329 (18%), Positives = 121/329 (36%), Gaps = 43/329 (13%) Query: 107 HPNISLSQSSLIE------IFLYKRCR--NIACQNLLPAD------DCDCDICSNKKGFC 152 H ++ +S + E + C+ N C +LL + CD+C ++ FC Sbjct: 141 HGSVRISSEEVAEQSPSGPLTGTAVCKAGNRFCSSLLEEEISPSAAAQSCDVCCSEPSFC 200 Query: 153 NLCMCVICSK-FDFASNTCRWIGCD-------VCSHWCHTDCAIREGLIKMGHSAKGASG 204 C C++C D A +I C+ +C H H +CA+R M + G+ G Sbjct: 201 RDCSCILCCNTIDLAYGGYSFIRCEAIVHDDVICGHAAHINCALRS---YMAGTVGGSVG 257 Query: 205 MTEMLFHCIACNHTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLF 264 + ++C C+ ++L V + + C + + K L+ + RGS+ ++L Sbjct: 258 -LDTEYYCRRCDTRTDLTKHVTKLLKTCESIESRDDIEKMLNVASCLLRGSQKKGSERLL 316 Query: 265 WKADELIEKLK--SKLIDPLDACNFILMF---------FQECDSDSPSLENGEGGFLIAP 313 + ++KLK S L D ++ + + D D +L + Sbjct: 317 NHIESALQKLKGGSDLQDVWKLEVDVMSLPTGQLDYTNYVQVDIDENNLSHQNEC----- 371 Query: 314 QDACNEIAEVVQDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKK 373 EI +V+ + R EV + + L + ++++ + +T + Sbjct: 372 LKLEVEIDQVLHELRRSQEVEYRLAQERLRAQKDHLSSLYQQMDKEKSELTRYPPSTNRN 431 Query: 374 KPQIEELESIVRLKQAEADMFQLKADEAR 402 + + Q E + A+ Sbjct: 432 -ALLSSVIVKEEYIQCELSKLKNMEKVAK 459 >AAA_Q7MJ41_237-431_PF00004.17 Length = 195 Score = 135 bits (340), Expect = 3e-30 Identities = 22/147 (14%), Positives = 42/147 (28%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F K + I +D + I + G+ L+ K Sbjct: 48 GTKYRGDFEKRFKTILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSGGK 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ+ D PSL++ ++ + E V+ Sbjct: 108 LRCIGSTTYQEYSNIFEKERALSRRFQKIDVVEPSLDDT--TKILMGLKSKYEAHHDVRY 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + + E + + A D Sbjct: 166 TNKALRAAVELSAKYINERHLPDKAID 192 >AAA_O00828_200-394_PF00004.17 Length = 195 Score = 135 bits (340), Expect = 3e-30 Identities = 19/147 (12%), Positives = 39/147 (26%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + +I +D + + + L+ + + Sbjct: 48 GAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKSDGAMDAANLLKPLLARGE 107 Query: 276 SKLIDPL---------DACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + F + PS+E E ++ E VQ Sbjct: 108 LRTIGATTLEEYRQYVEKDAAFERRFMPVQVNEPSVE--ECTSILRGLKDRYEQHHGVQI 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T + + V A+ R A D Sbjct: 166 TDKAVVVAAQLAGRYITNRFLPDKAID 192 >gi|75815463|ref|ZP_00745971.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Vibrio cholerae V52] Length = 869 Score = 135 bits (340), Expect = 3e-30 Identities = 34/244 (13%), Positives = 67/244 (27%), Gaps = 21/244 (8%) Query: 223 GFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F K + + +I +D + G + + + Sbjct: 272 EFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEGGSDAANLLKPALARGELSTVAA 331 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ D P+++ ++ ++ E A V T ++ Sbjct: 332 TTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQ--AVDILRGLNSVYEKAHNVLITDDALK 389 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R + A D A + + ++ LE++ +Q E D Sbjct: 390 AAAELSARYISGRQLPDKAIDV----LDTACARIAINMTTPPKRLALLETLCHQRQLEID 445 Query: 393 MFQLKA---DEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRL--SEAEERRQYLFEELK 447 M + E E T + + + R L E + Sbjct: 446 MLERAQFLGQEVDSERLDVLRNQELADEAEKAALTQSWQQQKSLVESIIALRAELMELSQ 505 Query: 448 AQEN 451 AQE Sbjct: 506 AQEQ 509 >AAA_CLPB_201-381_PF00004.17 Length = 181 Score = 135 bits (339), Expect = 3e-30 Identities = 13/136 (9%), Positives = 38/136 (27%), Gaps = 12/136 (8%) Query: 217 HTSELFGFVKDVFQHCAPN-WDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLK 275 F + + + ++I +D + + + + + + Sbjct: 48 GAKYRGEFEERLKSVLNELSQEEGSVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGE 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + ++ + FQ+ D P++E+ ++ E+ V+ Sbjct: 108 LHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIA--ILRGLKERYELHHHVEI 165 Query: 327 TARKMEVVAEEKMRMF 342 T + A R Sbjct: 166 TDPAIVAAARLSHRYV 181 >gi|19069667|emb|CAD26052.1| HSP 101 RELATED PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 851 Score = 135 bits (339), Expect = 3e-30 Identities = 32/272 (11%), Positives = 68/272 (25%), Gaps = 23/272 (8%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLID 280 F + + +I +D + + + + K I Sbjct: 240 RGDFEERLKTLVKEAETTPGVILFIDEIHIVLGAGKTDGAMDAANMLKPGLAAGTIKCIG 299 Query: 281 P---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ F + + PS+E+ ++ E V+ + Sbjct: 300 ATTHDEYRKYIENDPAFERRFVQVVVNEPSIEDSIT--MLRGLKGRLEAYHGVKIADSAI 357 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 + R A D L D ACA + +E + +I +S Sbjct: 358 VYAVNSSKKYISNRRLPDVAID--LLDTACASVMIALE--SEPQEILNQKSKAWGLDIAK 413 Query: 392 DMFQ----LKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELK 447 + K DE + YL+ + E ++ E Sbjct: 414 TSLEFDLSQKKDEQTLKKLKEVVEELEKVKASLQPMEEAYLRDKKHIIEAKKLKKKLEDT 473 Query: 448 AQENSQCDFDPMKMRME----SEIRGLLKGME 475 +Q + D + I + ++ Sbjct: 474 KLRLAQAERDRNTYVAYDLKTNVIPVIESELK 505 >gi|23098336|ref|NP_691802.1| ATP-dependent Clp proteinase [Oceanobacillus iheyensis HTE831] Length = 712 Score = 135 bits (339), Expect = 3e-30 Identities = 32/263 (12%), Positives = 79/263 (30%), Gaps = 27/263 (10%) Query: 221 LFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGS-EDARGKKLFWKADELIEKLKSKLI 279 F + + + + +I +D + I ++ + + + ++I Sbjct: 177 RGQFEERMKKLVEELQSRKDVILFIDEIHLIVGAGTAESSQMDVGNLLKPALARGDLQII 236 Query: 280 DP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKM 331 ++ + Q + PS E+ ++ E V+ + + Sbjct: 237 GATTLKEYRQIEKDAALERRLQPIMVNEPSFED--AVTILEGIKERYEKFHEVRYSEDVI 294 Query: 332 EVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEA 391 R + A D L D+ + +L ++ ++L+ I++ KQ A Sbjct: 295 RAFVNLSSRYIQDRHLPDKAID--LMDEVGSRLNLSNAQKDSATLQQQLDEIIKKKQEAA 352 Query: 392 DMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQEN 451 D+ + R E + K+ E EL +E Sbjct: 353 DIEDYEKAANLRYQE--------------IQLQKQLDKVEEGEKVLDVDISDIELIVEEK 398 Query: 452 SQCDFDPMKMRMESEIRGLLKGM 474 + M+ + +++ L + Sbjct: 399 TGIPVTKMQKDEQEKMKNLSDQL 421 >gi|67931722|ref|ZP_00524879.1| AAA ATPase, central region:Clp, N terminal [Solibacter usitatus Ellin6076] Length = 823 Score = 135 bits (339), Expect = 3e-30 Identities = 25/208 (12%), Positives = 57/208 (27%), Gaps = 24/208 (11%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + + + I +D + + + + + Sbjct: 244 GTKYRGQFEERLKTIMKELMENQNAIIFIDELHTLVGAGSAEGSLDAANILKPALSRGEI 303 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 + I ++ + FQ P+ + ++ E V T Sbjct: 304 QCIGATTPAEFRKSIEKDRSLERRFQAVKVPPPNESD--AIKILFGIKDRYEKFHAVAYT 361 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR-- 385 +E R A D L D+A A L+ + + +++ ++ Sbjct: 362 DDAIEAAVYTSSRYIPDRYLPDKAID--LIDEAGARVKLR--QTTLPADLADIQKRIKFI 417 Query: 386 --LKQAEADMFQLKA-----DEARREAE 406 + + + DE R+E E Sbjct: 418 VHRMENAIANHEFEKARFYSDEERKERE 445 >gi|67675617|ref|ZP_00472373.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal [Chromohalobacter salexigens DSM 3043] Length = 753 Score = 135 bits (339), Expect = 3e-30 Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 15/180 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F K + A I +D + + + G L+ + Sbjct: 259 GTKYRGDFEKRLKGLLAELRKQPNAILFIDEIHTVIGAGAASGGVMDASNLLKPLLSSGE 318 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + FQ+ D P++++ ++ E ++ Sbjct: 319 LRCIGSTTFQEFRGIFEKDRALARRFQKVDVPEPTVDDTI--RILKGLRGRFEEHHALKY 376 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACA-VTDLKMERQKKKPQIEELESIVR 385 T +E A R A D + D+A A L E + ++++E++V Sbjct: 377 TDTALESAARLADRYINDRYLPDKAID--VIDEAGAHQRLLPPEMRVSTIDVDQVEAVVA 434 >gi|23473480|ref|ZP_00128776.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Desulfovibrio desulfuricans G20] Length = 949 Score = 135 bits (339), Expect = 4e-30 Identities = 35/272 (12%), Positives = 79/272 (29%), Gaps = 26/272 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKL--FWKADELIEK 273 F + V + + + LI +D V I + L ++ + Sbjct: 352 GAKYRGEFEERVQKVLKEVTEHQDELILFIDEVHAIVGAGQGGGEGGLDVANVFKPMMAR 411 Query: 274 LKSKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVV 324 + LI ++ + FQ P++ ++ E V Sbjct: 412 GELNLIGATTLNEYQKYIEKDAALERRFQPVMVPEPTVAQTMM--ILRGLRDTFEAHHKV 469 Query: 325 QDTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV 384 T + AE R A D A +K+ + ++ELES + Sbjct: 470 SITEDAIIAAAELSDRYITARFLPDKAID----LLDQAAARVKLSATARPVAVQELESEL 525 Query: 385 RLKQAEAD--MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL 442 + E D + + D+A ++ + R S + E + Sbjct: 526 HQLRREQDYVASRKQYDKAAE-----LGKRIEAKETELKKLVEEWERERASGSAEVKAEH 580 Query: 443 FEELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 ++ + + + + + ++ L + + Sbjct: 581 VAQIVS-RLTGIPVNELTVEEREKLLHLEQRL 611 >gi|50084542|ref|YP_046052.1| ATP-binding protease component [Acinetobacter sp. ADP1] Length = 758 Score = 135 bits (339), Expect = 4e-30 Identities = 29/178 (16%), Positives = 50/178 (28%), Gaps = 14/178 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F K + Q I +D + I + Sbjct: 256 GTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTMDASNLIKPALANGT 315 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + + + FQ+ D + PS+ E ++ E V+ Sbjct: 316 LRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSI--TETIEILRGLKTKFEDFHHVEY 373 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIV 384 + + E + A D + D+A A LK E+ E +E IV Sbjct: 374 DDKALVAAVELSSKFINDRFLPDKAID--VIDEAGAQRRLKAEKDGSLITTENIEDIV 429 >gi|10174798|dbj|BAB05898.1| ATP-dependent proteinase [Bacillus halodurans C-125] Length = 711 Score = 134 bits (338), Expect = 4e-30 Identities = 29/270 (10%), Positives = 73/270 (27%), Gaps = 35/270 (12%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSED-ARGKKLFWKADELIEKLK 275 TS F + + Q + +I +D + + + + + Sbjct: 174 GTSYRGQFEEKMEQLVRELEARDDVILFIDEIHMVVGAGATSEGSMDAGNILKPALARGQ 233 Query: 276 SKLID--------PLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 ++I ++ + FQ P+LE ++ E V Sbjct: 234 LQIIGATTLNEYRKIEKDPALERRFQPITVKEPTLEA--AVEILKGVRPIYEAYHHVSYP 291 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E R + A D L D+ + L ++EL+ + Sbjct: 292 DDVLEACVRLSDRYIQDRFLPDKAID--LMDEIGSALTL----TSGPTTLDELKERLAEI 345 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL---FE 444 E + D R L +++E + + Sbjct: 346 TKEKQQATAQEDYERAAKLRD---------------EENLLHKQMNENRAEKTEVTVADI 390 Query: 445 ELKAQENSQCDFDPMKMRMESEIRGLLKGM 474 + ++ + ++ +++++ L + Sbjct: 391 QGLIEKRTGIPVRKLQKAEQTKMKDLHNRL 420 >AAA_Q5R0C4_211-405_PF00004.17 Length = 195 Score = 134 bits (337), Expect = 5e-30 Identities = 23/147 (15%), Positives = 43/147 (29%), Gaps = 12/147 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F K + E I +D + I + G L+ + Sbjct: 48 GTKYRGDFEKRFKMLLKELQEKEHAILFIDEIHTIIGAGAASGGVLDASNLIKPLLSSGQ 107 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K I + ++ FQ+ D PS+E+ ++ E ++ Sbjct: 108 LKCIGSTTYNEFKNVFEKDRALVRRFQKVDVVEPSVEDT--TKILMGLKERYESHHGIRY 165 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACD 353 T ++ AE + + A D Sbjct: 166 TQPAIKAAAELSAKYINERHLPDKAID 192 >gi|48850364|ref|ZP_00304606.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Novosphingobium aromaticivorans DSM 12444] Length = 792 Score = 134 bits (337), Expect = 5e-30 Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + Q + I +D + + + G + Sbjct: 268 GTRYRGDFEERLKQVVSELEKMPHAILFIDEIHTVIGAGATSGGAMDASNLLKPALSGGT 327 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + +L FQ+ D + P++E+ ++ E V+ Sbjct: 328 IRCIGSTTYKEFRNHFEKDRALLRRFQKIDVNEPTVEDTI--KILKGLRTAFEEHHKVKY 385 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDL-KMERQKKKPQIEELESIVR 385 T ++ E R + A D + D+ A+ L ++KK E+E ++ Sbjct: 386 TPDAIKTAVELSARYINDRKLPDKAID--VIDEVGAMQMLVPPSKRKKTITAREIEQVIA 443 Query: 386 LK 387 Sbjct: 444 TM 445 >gi|71149858|ref|ZP_00648780.1| AAA ATPase, central region:Clp, N terminal [Thiomicrospira denitrificans ATCC 33889] Length = 725 Score = 134 bits (337), Expect = 6e-30 Identities = 24/171 (14%), Positives = 47/171 (27%), Gaps = 13/171 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F K + I +D + + + + + + Sbjct: 240 GTKYRGDFEKRLKGIMDELKGIPNAILFIDEIHTLIGAGSTSGSMDAANQLKPALASGEL 299 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 K + + + F + D + PSLE ++ + E V T Sbjct: 300 KCMGATTFAEYRNGFEKDKALSRRFSKIDINEPSLE--TSYKILKGLKSKYEAHHNVTYT 357 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIE 378 ++ E R A D L D+ A LK +++ + Sbjct: 358 DNALKSAVELSKRYITDKFLPDKAID--LIDECAASFHLKKVKRRVVSSTD 406 >gi|30249695|ref|NP_841765.1| ClpA, ATP dependent protease, chaperonin [Nitrosomonas europaea ATCC 19718] Length = 756 Score = 134 bits (337), Expect = 6e-30 Identities = 29/180 (16%), Positives = 54/180 (30%), Gaps = 15/180 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F + + D I +D + + + G + + Sbjct: 255 GTKYRGDFEQRLKVVLKQLTDNPKAILFIDEIHTLIGAGAASGGTLDASNLLKPALSSGR 314 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K I + + + FQ+ D P + ++ + E V+ Sbjct: 315 LKCIGATTYNEYRGVFEKDHALSRRFQKIDVSEPDIGET--VEILRGLKSRYEKHHNVKY 372 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTD-LKMERQKKKPQIEELESIVR 385 T + AE R A D + D+A A L RQ+K +E+E ++ Sbjct: 373 TEVALTAAAELSARFINDRHLPDKAID--VIDEAGAAQRILPKSRQRKIIGRQEIEQVIA 430 >gi|48764527|ref|ZP_00269079.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Rhodospirillum rubrum] Length = 779 Score = 134 bits (337), Expect = 6e-30 Identities = 26/182 (14%), Positives = 59/182 (32%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + +E + +D + + + G + + Sbjct: 263 GTRYRGDFEERLKAVVGELEAYEGAVLFIDEIHTVIGAGATSGGSMDASNLLKPALAQGL 322 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + + + ++ FQ+ D + PS+E+ ++ + E V+ Sbjct: 323 LRCVGSTTYKEFRNHFEKDRALVRRFQKIDVNEPSVEDT--VKILRGIKSYYEDHHKVRY 380 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 T + E + + A D + D+ A L E R++K + ++E IV Sbjct: 381 TNDAVRAAVELSNKYINDRKLPDKAID--VIDEVGAARMLLPESRRRKTVTVRDIEEIVA 438 Query: 386 LK 387 Sbjct: 439 KI 440 >AAA_CLPB_335-528_PF00004.17 Length = 194 Score = 134 bits (337), Expect = 6e-30 Identities = 16/147 (10%), Positives = 39/147 (26%), Gaps = 11/147 (7%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 + F + + + +I +D + + + + + Sbjct: 48 GSKYRGEFEERLKALLDEVKEKGNVILFIDEIHTVVGAGAAEGAVDAANIMKPALARGEI 107 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 ++I ++ + FQ D P+ E ++ E V+ + Sbjct: 108 RVIGATTVDEYRKYIEKDPALERRFQPVFVDEPTEEQTI--EILKGLRPRLEQFHKVKIS 165 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDR 354 +E + R R A D Sbjct: 166 DEAIEAAVKLTKRYVTFRRLPDKAIDA 192 >gi|3218360|emb|CAA19619.1| clp protease ATP binding subunit [Streptomyces coelicolor A3(2)] Length = 842 Score = 134 bits (337), Expect = 6e-30 Identities = 26/203 (12%), Positives = 57/203 (28%), Gaps = 19/203 (9%) Query: 217 HTSELFGFVKDVFQHCAPNWDF-EALIKELDFVRKIFRGSEDARG--KKLFWKADELIEK 273 T F + + + LI +D + + + + Sbjct: 277 GTRYRGDFEERMNNIVGEIRAHSDELIIFIDELHTVVGAGGGGESGSMDAGNILKPALAR 336 Query: 274 LKSKLIDP--------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQ 325 + ++ ++ + FQ P+ + ++ E V+ Sbjct: 337 GELHIVGATTLEEYRRIEKDAALARRFQPILVPEPTTAD--AIEILRGLRDRYEAHHQVR 394 Query: 326 DTARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVR 385 T + E R R A D L D+A A L+ + K + LE V Sbjct: 395 YTDEALVAAVEMSDRYLTDRRLPDKAID--LIDQAGARVRLRA--RTKGTDVRALEREVD 450 Query: 386 LK--QAEADMFQLKADEARREAE 406 + + + ++A + + Sbjct: 451 QLVRDKDQAVADEQYEQATQLRD 473 >gi|71908708|ref|YP_286295.1| AAA ATPase, central region:Clp, N terminal [Dechloromonas aromatica RCB] Length = 753 Score = 134 bits (337), Expect = 6e-30 Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGK-KLFWKADELIEKLK 275 T F + + D I +D + + + G + + Sbjct: 255 GTKYRGDFEQRLKGVLKALQDNPNAILFIDEIHTLIGAGSASGGTLDASNLLKPALSSGQ 314 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 K I + + + FQ+ D + PS+ ++ A E ++ Sbjct: 315 LKCIGATTYTEFRGIFEKDSALSRRFQKIDVNEPSVAET--VEILKGLKARFEAHHGIKY 372 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 +A + AE R A D + D+A A + + +QKK ++E IV Sbjct: 373 SATAISSAAELSARYITDRHLPDKAID--VIDEAGAAQRILPKSKQKKVINKTDIEEIVA 430 Query: 386 LK 387 Sbjct: 431 KI 432 >gi|42518421|ref|NP_964351.1| ATP-dependent clp protease ATP-binding subunit clpA-like protein [Lactobacillus johnsonii NCC 533] Length = 822 Score = 134 bits (337), Expect = 6e-30 Identities = 22/210 (10%), Positives = 59/210 (28%), Gaps = 24/210 (11%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + ++I +D + + + + Sbjct: 258 GTKYRGEFEDRMKKILKEIQQDGSVILFVDEMHTLIGAGGAEGAIDASNILKPSLARGDI 317 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 ++I ++ + FQ+ PS E ++ E V+ Sbjct: 318 QMIGATTFDEYQKYIEKDQALARRFQQVKIGEPSKEET--VDILKGLRPKYEKFHNVKIE 375 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIE---ELESIV 384 + E R A D L D+A A ++ + + ++ ++ Sbjct: 376 DEAINDAVEFSTRYIANRFLPDKAID--LIDEASAAVKIQAIGKSDPRLTKLDTQINDVI 433 Query: 385 RLKQAEAD--------MFQLKADEARREAE 406 K+ A+ + + ++ ++ + Sbjct: 434 HQKEQAAENQNFVQAAKLRDEENKLTQDRD 463 >gi|59711606|ref|YP_204382.1| ATP-dependent protease subunit [Vibrio fischeri ES114] Length = 860 Score = 134 bits (337), Expect = 6e-30 Identities = 39/255 (15%), Positives = 76/255 (29%), Gaps = 38/255 (14%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKSKLIDP 281 F + + + +I +D + A + + + + I Sbjct: 262 EFERRLNLVITAVQESPTPIILFIDEAHTLIGAGGQAGSNDAANLLKPALARGELRTIGA 321 Query: 282 ---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 ++ + FQ + P++ + ++ E + V + Sbjct: 322 TTWSEYKKYIEKDPALARRFQPVKVNEPNV--TQAITILRGLAERYEESHGVYVRDDAII 379 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 AE R + A D L D ACA +K+ + K +E L I+ + Q E D Sbjct: 380 AAAELSARYISGRQLPDKAID--LLDTACA--RVKINLKAKPESLERLLHIIAITQRELD 435 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYLFEELKAQENS 452 E T LK +LS+ + L +E + Q+ Sbjct: 436 CVLRDQQAGINIEEN----------------TITLLKEKLSQTHLDAEQLEQEWQTQK-- 477 Query: 453 QCDFDPMKMRMESEI 467 + + + S I Sbjct: 478 ----ELAEALLTSRI 488 >gi|61099680|ref|ZP_00375141.1| ATPases [Erythrobacter litoralis HTCC2594] Length = 792 Score = 134 bits (337), Expect = 6e-30 Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + Q + I +D + + + G + Sbjct: 265 GTRYRGDFEERLKQVVSELEKMPEAILFIDEIHTVIGAGATSGGAMDASNLLKPALSGGT 324 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + +L FQ+ D + P++E+ ++ + E V+ Sbjct: 325 IRCIGSTTYKEFRNHFEKDRALLRRFQKIDVNEPTIEDT--VKILKGLKSAFEDHHKVKY 382 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDL-KMERQKKKPQIEELESIVR 385 T ++ E R + A D + D+ A+ L R+KKK +E+E ++ Sbjct: 383 TLDALKTAVELSARYINDRKLPDKAID--VVDEVGAMQMLVPPSRRKKKITAKEIEQVIA 440 Query: 386 LK 387 Sbjct: 441 TM 442 >gi|13470854|ref|NP_102423.1| endopeptidase Clp ATP-binding chain A [Mesorhizobium loti MAFF303099] Length = 822 Score = 134 bits (337), Expect = 6e-30 Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 15/182 (8%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARG-KKLFWKADELIEKLK 275 T F + + Q D+ + +D + + + G + Sbjct: 271 GTRYRGDFEERLKQVVKELEDYPGAVLFIDEIHTVIGAGATSGGAMDASNLLKPALSSGA 330 Query: 276 SKLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQD 326 + I + ++ FQ+ D + P++E+ ++ E V+ Sbjct: 331 IRCIGSTTYKEFRQFFEKDRALVRRFQKIDVNEPTIED--AIEIMKGLKPYFEEFHKVRY 388 Query: 327 TARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKME-RQKKKPQIEELESIVR 385 T+ ++ E R + A D + D+ A L E ++KK I+E+E+ + Sbjct: 389 TSEAIKASVELSARYINDRKLPDKAID--VIDETGASQMLVPEAKRKKTIGIKEIEATIA 446 Query: 386 LK 387 Sbjct: 447 TM 448 >gi|15606509|ref|NP_213889.1| ATP-dependent Clp protease [Aquifex aeolicus VF5] Length = 810 Score = 134 bits (337), Expect = 7e-30 Identities = 29/235 (12%), Positives = 70/235 (29%), Gaps = 25/235 (10%) Query: 217 HTSELFGFVKDVFQHCAPNWDFEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS 276 T F + + +I +D + + + + + Sbjct: 243 GTKYRGQFEERLKNILKELEKANNVILFIDELHTLVGAGSAEGSIDASNMLKPALARGEI 302 Query: 277 KLIDP---------LDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDT 327 ++I ++ + FQ + PS E+ ++ E V+ T Sbjct: 303 QVIGATTVDEYRKYIEKDGALERRFQPVYVEQPSPEDTI--QILYGLKPKFEEFHKVEYT 360 Query: 328 ARKMEVVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLK 387 +E E ++ A D + D+A A+ LK + + + E + K Sbjct: 361 PEAIEKAVELSVKYITDRNLPDKAID--VMDEAGALVKLKATQLPPELKEIEEKIKELEK 418 Query: 388 QAEADMFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKLRLSEAEERRQYL 442 + E + + ++A + + +K+ ++ EE + Sbjct: 419 EKEKAVKEQDYEKAAKIRD------------EELRLRAKFETMKAKWKEEMEKNR 461 >gi|58583098|ref|YP_202114.1| ClpB [Xanthomonas oryzae pv. oryzae KACC10331] Length = 909 Score = 134 bits (337), Expect = 7e-30 Identities = 24/236 (10%), Positives = 51/236 (21%), Gaps = 17/236 (7%) Query: 223 GFVKDVFQHCAPNWDFEA-LIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + +I +D + A + + + Sbjct: 290 EFENRLKNVIDEVKKSPHPIILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELRTIAA 349 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + PS ++ E ++ + Sbjct: 350 TTWSEYKKYFEKDAALARRFQVVKVEEPS--ETLAAAMLRGMVPLMEKHFGIRVMDEAVT 407 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A A + + + IE+ + AE Sbjct: 408 EAVRLSHRYISGRQLPDKAVSV----LDTACAKVALGQSATPAIIEDTRKHLDRLAAELA 463 Query: 393 MFQLKADEARREAEXXXXXXXXXXXXXXXXYTSKYLKL-RLSEAEERRQYLFEELK 447 + R + +L R E ER L +L+ Sbjct: 464 ALNRETSGGARHHDARVAELLQAQESARKVLADNQTRLVRERELAERIVALRAQLE 519 >gi|26989814|ref|NP_745239.1| chaperone-associated ATPase, putative [Pseudomonas putida KT2440] Length = 878 Score = 133 bits (336), Expect = 8e-30 Identities = 21/195 (10%), Positives = 46/195 (23%), Gaps = 20/195 (10%) Query: 223 GFVKDVFQHCAPNWD-FEALIKELDFVRKIFRGSEDARGKKLFWKADELIEKLKS----- 276 F + +I +D + A + + + Sbjct: 289 EFENRLKAVIEEVKRSLHPIILFIDEAHTLIGSGGQAGQNDAANLLKPALARGELRTIAA 348 Query: 277 ----KLIDPLDACNFILMFFQECDSDSPSLENGEGGFLIAPQDACNEIAEVVQDTARKME 332 + + + FQ + P + + ++ V + Sbjct: 349 TTWAEYKKYFEKDAALARRFQVVKVEEP--DEDKAIHMLRGLLGKMREHHKVAVMDEALV 406 Query: 333 VVAEEKMRMFKKARSVLDACDRELEDKACAVTDLKMERQKKKPQIEELESIVRLKQAEAD 392 R + A A + + + +E+ + QAE D Sbjct: 407 QAVRLSNRYITGRQLPDKAVSV----LDTACARIALAQSSLPGALEDCRRQIDNLQAEID 462 Query: 393 MFQLKA----DEARR 403 + +A D ARR Sbjct: 463 VLGHEAGKGHDHARR 477 Database: nr95_Pfam18 Posted date: Oct 20, 2005 3:49 PM Number of letters in database: 830,037,145 Number of sequences in database: 2,959,546 Lambda K H 0.314 0.149 0.402 Lambda K H 0.267 0.0456 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,924,714,190 Number of Sequences: 2959546 Number of extensions: 188649534 Number of successful extensions: 2137224 Number of sequences better than 1.0: 600 Number of HSP's better than 1.0 without gapping: 13251 Number of HSP's successfully gapped in prelim test: 36684 Number of HSP's that attempted gapping in prelim test: 1301024 Number of HSP's gapped (non-prelim): 290186 length of query: 477 length of database: 830,037,145 effective HSP length: 130 effective length of query: 347 effective length of database: 445,296,165 effective search space: 154517769255 effective search space used: 154517769255 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 85 (37.2 bits)