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GPI Anchor Biosynthesis Report: NP_079439.1 (SMP3 family, Homo sapiens)



Sequence Analysis
Name From To Source/E Description
LCR 5 14 SEG 12 2.2 2.5  
TM 5 25 toppred2=1.307  
TM 90 110 toppred2=1.319  
TM 156 176 toppred2=1.193  
TM 181 201 toppred2=1.607  
TM 227 247 toppred2=1.107  
TM 257 277 toppred2=1.588  
TM 315 335 toppred2=1.089  
LCR 329 347 SEG 12 2.2 2.5  
LCR 352 381 SEG 12 2.2 2.5  
TM 367 387 toppred2=1.742  
LCR 392 402 SEG 12 2.2 2.5  
TM 412 432 toppred2=1.458  
LCR 468 481 SEG 12 2.2 2.5  


Sequence Information
Protein NP_079439.1
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|13376765|gb|NP_079439.1|NP_079439 hypothetical protein FLJ12768 [Homo sapiens].
    Protein Sequence 
    MQICGSSVAS VAAGTSFQVL GPVCWQQLDL KMAVRVLWGG LSLLRVLWCL LPQTGYVHPD
EFFQSPEVMA EDILGVQAAR PWEFYPSSSC RSVLFPLLIS GSTFWLLRLW EELGPWPGLV
SGYALLVGPR LLLTALSFAL DGAVYHLAPP MGADRWNALA LLSGSYVTLV FYTRTFSNTI
EGLLFTWLLV LVSSHVTWGP TRKEPAPGPR WRSWLLGGIV AAGFFNRPTF LAFAVVPLYL
WGTRGATNPG LKSLTREALV LLPGATLTAA VFVATDSWYF SSPATSRNLV LTPVNFLHYN
LNPQNLARHG THARLTHLAV NGFLLFGVLH AQALQAAWQQ LQVGLQASAQ MGLLRALGAR
SLLSSPRSYL LLLYFMPLAL LSAFSHQEAR FLIPLLVPLV LLCSPQTQPV PWKGTVVLFN
ALGALLFGCL HQGGLVPGLE YLEQVVHAPV LPSTPTHYTL LFTHTYMPPR HLLHLPGLGA
PVEVVDMGGT EDWALCQTLK SFTRQPACQV AGGPWLCRLF VVTPGTTRRA VEKCSFPFKN
ETLLFPHLTL EDPPALSSLL SGAWRDHLSL HIVELGEET


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003