IMP GPI Biosynthesis Report IMP-Bioinformatics
GPI Biosynthesis Main Page  
GPI Site Motif   GPI Site Prediction   Home Page B.E.  

GPI Anchor Biosynthesis Report: NP_191276.1 (PIG-Q family, Arabidopsis thaliana)



Sequence Analysis
Name From To Source/E Description
TM 19 39 toppred2=1.165  
Cluster 45 105 SAPS Mixed charge cluster
TM 137 157 toppred2=1.411  
LCR 165 176 SEG 12 2.2 2.5  
LCR 211 221 SEG 12 2.2 2.5  
LCR 252 274 SEG 12 2.2 2.5  
TM 259 279 toppred2=1.856  
TM 329 349 toppred2=1.080  
LCR 337 348 SEG 12 2.2 2.5  
TM 401 421 toppred2=2.067  
TM 424 444 toppred2=1.646  
TYR_PHOSPHO_SITE 484 492 PROSITE Pattern PS00007 RQRMDSYGY
LCR 502 531 SEG 12 2.2 2.5  
TM 505 525 toppred2=2.073  
TM 528 548 toppred2=1.128  
Cluster 567 596 SAPS Negative charge cluster


Sequence Information
Protein NP_191276.1
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|15230234|gb|NP_191276.1|NP_191276 putative protein [Arabidopsis thaliana].
    Protein Sequence 
    MKRKCRIWLP KQLASTDDLS HSLLFGWFVC HSSSCLDVVV SFISDESSLS NAGSKLQDVL
RETNEKMPST LRDKAAFTLL GRYDISRNAN GNVSKIIRDK DMSRKAGAYV RPCKYSGLSC
GCHKSIELWN SIQVLDCIIY TGMGILYLNA MSTYVIVYDT PVFGSHHFSL SFSNSSPQTK
APLKKPKWVD DLHNRKPLNE METVILSLNC AAAAKIAYKK ISTQLETSSQ NFSISYLISS
LTWRLLATIL GSLSSLYYSL AQFFYLLSSF LIFSWVHIAS RRVLKNTWIN FRIRSCQILY
WPIFLEEIDM MSISCVKHAE EAALQRHSTW SAMAVDLVLG NLIGLGLLFN TESVCSFVFD
FAKEFTNGIL RSGSVWLMGV PAGFKLNTEL AGVLGMVSLN VIQIWSTLWV FMASFIFCLI
RVIAILGITF GATVSAAFVI DVITFATLHI MALHWAITLV YSHQIQALAA LWRLFRGRKL
NPLRQRMDSY GYTVKQHVVG SLLFTPLLLL LPTTSVFYIF FTITSTTINS ICMLIEFAIS
VIHATPYAEV MIWLVRRKRF PCGVWFEMEH CGEHILKSND AFEDSKSLLE EHGTPEKNSL
MVSNLRSNFL TLGQILLPHY KTIFSGISAS SLTTSARGVL SGKRMPSKLG LDLPPPRPWL
HMPLRQYWML CHNSISSCGK


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003