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GPI Anchor Biosynthesis Report: orf6.7880.prot (PIG-M family, Candida albicans)



Sequence Analysis
Name From To Source/E Description
TM 5 25 toppred2=1.498  
LCR 16 22 SEG 12 2.2 2.5  
DXD motif 35 37 DID within the ER lumen
TM 82 102 toppred2=1.096  
LCR 96 113 SEG 12 2.2 2.5  
TM 133 153 toppred2=1.265  
TM 156 176 toppred2=1.084  
LCR 171 186 SEG 12 2.2 2.5  
TM 208 228 toppred2=1.410  
TM 273 293 toppred2=1.576  
TM 313 333 toppred2=1.448  
TM 341 361 toppred2=1.671  
TM 375 395 toppred2=1.420  


Sequence Information
Protein orf6.7880.prot
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: ftp://cycle.stanford.edu/pub/projects/candida/
    Protein Sequence 
    MSQLKYLITF SILLRFGFFF FGLYQDEYMP VKYTDIDYLV FNDASKFVYQ GLSPYLRETY
RYTPILAILL IPDNFGKYWY HFGKLLFMVS DVITGLIILK LLSKQQQLSE KKKMILSSIW
LLNPMVITIS TRGSAESVLT VMIMLSLYYL LDKDNVILSA IWLGLSIHFK IYPIIYLPSI
LYYLSSQETP FLASVPGINL VNAKNLKYII ITLTTLAVVN YLMFLKYGWE FIDNSYLYHV
TRLDHRHNFS VYNMVLYYKS ALLEDSNGFD IEKIAFVPQL LLSAVIIPLI FAKEDLISSL
FIQTFVFVAF NKVITSQYFI WFLIFLPHFL SKTKLLTTDK ITGISCLLLW IISQATWLYF
AYKLEFLGEN TFDNGLMYSS VFFFLSNCWC TMKFIQSL


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003