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GPI Anchor Biosynthesis Report: CAB89880.1 (from pos. 405, PIG-M family, Schizosaccharomyces pombe)



Sequence Analysis
Name From To Source/E Description
TM 21 41 toppred2=1.315  
LCR 24 46 SEG 12 2.2 2.  
DXD motif 62 64 DID within the ER lumen
TM 89 109 toppred2=1.228  
TM 136 156 toppred2=1.302  
TM 188 208 toppred2=1.222  
TM 230 250 toppred2=1.845  
TM 289 309 toppred2=1.850  
TM 330 350 toppred2=1.539  
TM 357 377 toppred2=1.750  
TM 382 402 toppred2=1.960  


Sequence Information
Protein CAB89880.1
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|7688325|gb|CAB89880.1|CAB89880 hypothetical transmembrane protein [Schizosaccharomyces pombe].
    Protein Sequence 
    MKLLSKYNSR ENMITKLRES SLYLLYAPTD AFLLLLLGLL MRLVLLNYGI WHDRRSALKF 
TDIDYFVFSD ASKYVSIGMS PYMRDTYRYT PMLAILLLPT QYGFPSWGKY LFSISDLIAG
WLMIKLLSRR ISYKRSLIYS SFWILNPFVA IISTRGNCEA ILGILSIALL YLIEKKSVWL
ASLILGFSVH FKIYPFMYGI AFLVYFSKPK KGSTFMEKFL SLLSINQLKI VVGSLFMFTI
CNLLMYYLYG SPFLEHTYLY HFGRTDHRHN FSLHHLNLYY ESSFGAKASS LFAFLPQLSL 
CMLIPLVFGK KNLPGTLFAQ TFAFVTFNKV CTSQYFMWYL VFLPLVLPNS KLLSKKGLIC
LSLWIIGQLL WLISAYNLEM LGKSVFIPLW LSGLLFFFFN VYELKIILDS L


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003