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GPI Anchor Biosynthesis Report: NP_004846.1 (PIG-B family, Homo sapiens)



Sequence Analysis
Name From To Source/E Description
Cluster 27 53 SAPS Positive charge cluster
TM 61 81 toppred2=0.971 Putative
TM 170 190 toppred2=1.146  
TM 224 244 toppred2=1.234  
TM 256 276 toppred2=1.598  
TM 315 335 toppred2=1.393  
TM 338 358 toppred2=1.580  
LCR 341 351 SEG 12 2.2 2.5  
TM 361 381 toppred2=1.663  
TM 387 407 toppred2=1.726  
LCR 388 401 SEG 12 2.2 2.5  
TM 428 448 toppred2=1.090  
Cluster 487 507 SAPS Negative charge cluster


Sequence Information
Protein NP_004846.1
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|4758918|gb|NP_004846.1|NP_004846 phosphatidylinositol glycan, class B [Homo sapiens].
    Protein Sequence 
    MRRPLSKCGM EPGGGDASLT LHGLQNRSHG KIKLRKRKST LYFNTQEKSA RRRGDLLGEN
IYLLLFTIAL RILNCFLVQT SFVPDEYWQS LEVSHHMVFN YGYLTWEWTE RLRSYTYPLI
FASIYKILHL LGKDSVQLLI WIPRLAQALL SAVADVRLYS LMKQLENQEV ARWVFFCQLC
SWFTWYCCTR TLTNTMETVL TIIALFYYPL EGSKSMNSVK YSSLVALAFI IRPTAVILWT
PLLFRHFCQE PRKLDLILHH FLPVGFVTLS LSLMIDRIFF GQWTLVQFNF LKFNVLQNWG
TFYGSHPWHW YFSQGFPVIL GTHLPFFIHG CYLAPKRYRI LLVTVLWTLL VYSMLSHKEF
RFIYPVLPFC MVFCGYSLTH LKTWKKPALS FLFLSNLFLA LYTGLVHQRG TLDVMSHIQK
VCYNNPNKSS ASIFIMMPCH STPYYSHVHC PLPMRFLQCP PDLTGKSHYL DEADVFYLNP
LNWLHREFHD DASLPTHLIT FSILEEEISA FLISSNYKRT AVFFHTHLPE GRIGSHIYVY
ERKLKGKFNM KMKF


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 24th January 2003