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GPI Anchor Biosynthesis Report: orf6.4571.prot (GAA1 family, Candida albicans)



Sequence Analysis
Name From To Source/E Description
LCR 3 13 SEG 12 2.2 2.5  
Cluster 3 33 SAPS Positive charge cluster
TM 1 44 64 toppred2=1.571  
LCR 47 62 SEG 12 2.2 2.5  
Cluster 88 115 SAPS Mixed charge cluster
LCR 378 397 SEG 12 2.2 2.5  
TM 2 379 399 toppred2=1.734  
TM 3 403 423 toppred2=1.518  
LCR 446 468 SEG 12 2.2 2.5  
TM 4 448 468 toppred2=2.303  
TM 5 471 491 toppred2=1.948  
TM 6 496 516 toppred2=1.652  
TM 7 535 555 toppred2=2.238  


Sequence Information
Protein orf6.4571.prot
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: ftp://cycle.stanford.edu/pub/projects/candida/
    Protein Sequence 
    MVKKKKKSTK KKKFLNNSFF MALAETVIRK VKKLGLVPKA IAILPRLSLL VAALSVLWLV
TLPQDGNYRN VYISENALMP AQANSYFRES EWNIVRGYRE EIGKMEEWSV ADRNEVIASW
LVDSGLQISY HENGFANNTL YAIMHAPRGE NTEAMALVVP WTNSDNEYNE GAMSLAVALA
RYFTKMSIWS KNIIFVFPET GHRPLRSWVE AYHTVLDDTA GSIEAAIIME YGKNGDYFEY
YDMFYEGLNG QLPNLDLLNT ANVMTYHEQI PCAMQGMSDR VINYSTRLQT LFRGILKLTL
VGLTDEVHGC EAFSGWQIQA FTIKVRGTEG KDVTQFGRIV DSTFRSVNNL LEKFHQSFFF
YLMLSPKHFV SIGTYLPSAI LLAVSYALSS VSAVVVAGFD FRKLYFVVVV EIACAILAFV
PVNQVMLVAI SAVVLLPRQA IFSKQAAFSL ISIALLAVAL LITALLIVHF ALAFSIGILA
LPLTFVPTLM KNKSRLTAFC LAVSNPFFVI FVAGKVLGHP ELFDRLVTAW SDIQCWTWFI
VVLGWFPAWV IITLSYCGYK PVKEKSE


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 28th January 2003