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GPI Anchor Biosynthesis Report: XP_235447.1 (GAA1 family, Rattus norvegicus)



Sequence Analysis
name from to source/E description
LCR 8 20 SEG 12 2.2 2.5  
TM 1 22 42 toppred2=1.996  
Cluster 61 133 SAPS Mixed charge cluster
LCR 68 81 SEG 12 2.2 2.5  
LCR 236 251 SEG 12 2.2 2.5  
LCR 291 306 SEG 12 2.2 2.5  
TM 2 379 399 toppred2=1.911  
TM 3 463 483 toppred2=1.774  
LCR 508 520 SEG 12 2.2 2.5  
TM 4 511 531 toppred2=1.615  
TM 5 560 580 toppred2=1.854  
TM 6 594 614 toppred2=1.919  
TM 7 645 665 toppred2=1.946  


Sequence Information
protein XP_235447.1
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|27662166|gb|XP_235447.1|LOC300046 similar to GPI anchor attachment protein 1 [Mus musculus] [Rattus norvegicus].
    Protein Sequence 
    MGLLSDPVRR RALARIVLRL NTPLCVLSYV AGIAWFLALA FPPLTQRTYM SENAMGSTMV
EEQFVGGDRA RNFARDFAAH RKKPGALPVA WLERAMRSVG LEVYTQSFSR KLPFPDETHE
RYVLREMGVP GRKMVSGTNV YGILRAPRAA STESLVLTVP CGPDTTNSQA VGLLLALAAH
FRGQIYWAKD IIFLVTEHDL LGTEAWLEAY HDINVTGIQS SPLQGRAGAI QAAVALELSS
DVVTSLDVTV EGLNGQLPNL DLLNLFQTFC QKGGLLCTLQ GKLQPQDWTS LEGPLQGLQT
LLLMVLRQAS GRPHGPHGLF LRYGVEALTL RGINSFRQYK YDLVAVGKAL EGMFRKLNHL
LERLHQSFFF YLLPALSRFV SIGLYMPATG FLLLVLGLKI SSTLVLDTHL WPNSDPFNCK
LHEAGVNPEE AGKAPGPGSP PLATQVTSYS TALRMGSQRP QQCFLWSTLS SVSLASLMAP
LLISQAMGLA LYFLPVLGQH VAAQHFPVAE AEAVVLTLLA IYVAGLALPH NTHRVVSSQV
PDRGWMALKL VALIYLALQL GCIALLNFSL GFLLAATMVP AAALTKPHGP RTLYAALLVV
TSPAVTLFGS LFLWRELQEV PLSLAEGWQL FLTALAQGVL EHYTYGALLF PILALGLYPC
WLLFWNVLFW K


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 28th January 2003