IMP GPI Biosynthesis Report IMP-Bioinformatics
GPI Biosynthesis Main Page  
GPI Site Motif   GPI Site Prediction   Home Page B.E.  

GPI Anchor Biosynthesis Report: NP_013189.1 (GAA1 family, Saccharomyces cerevisiae)



Sequence Analysis
Name From To Source/E Description
TM 1 24 44 toppred2=2.335  
Cluster 204 236 SAPS Negative charge cluster
TM 2 353 373 toppred2=1.687  
TM 3 391 411 toppred2=2.183  
TM 4 416 436 toppred2=2.059  
TM 5 465 485 toppred2=2.062  
LCR 528 540 SEG 12 2.2 2.5  
TM 6 536 556 toppred2=1.827  
TM 7 578 598 toppred2=2.172  


Sequence Information
Protein NP_013189.1
Analysis
  • BlastP against nr

  • Output Created by a Suite of Single Sequence Analysis Techniques
    • Protein Description
    SEQ.SOURCE: gi|6323117|gb|NP_013189.1|NP_013189 Possible component of GPI:protein transamidase; Gaa1p [Saccharomyces cerevisiae].
    Protein Sequence 
    MALLEKLHRR IVDMGLVPRI IALLPVISML CALFGFISIA ILPMDGQYRR TYISENALMP
SQAYSYFRES EWNILRGYRS QIKEMVNMTS MERNNLMGSW LQEFGTKTAI YENEQYGETL
YGVMHAPRGD GTEAMVLAVP WFNSDDEFNI GGAALGVSLA RFFSRWPVWS KNIIVVFSEN
PRAALRSWVE AYHTSLDLTG GSIEAAVVLD YSSTEDFFEY VEISYDGLNG ELPNLDLVNI
AISITEHEGM KVSLHGLPSD QLTNNNFWSR LKILCLGIRD WALSGVKKPH GNEAFSGWRI
QSVTLKAHGN SGHDITTFGR IPEAMFRSIN NLLEKFHQSF FFYLLLAPRQ FVSISSYLPS
AVALSIAFAI SSLNAFINNA YANISLFSEY NLVALLVWFV SLVISFVVSQ AFLLIPSSGL
LMTISMASCF LPLILSRKIH ISEPLSYRLK NVAFLYFSLV STSLLMINFA MALLIGTLAF
PMTFVKTIVE SSSEHEVTTQ SSNPIKTEPK DEIELVENHM DTTPATPQQQ KQKLKNLVLL
ILTNPFISIT LFGLFFDDEF HGFDIINKLV SAWLDLKCWS WFVLCIGWLP CWLLILASSF
ESKSVVVRSK EKQS


    Author: Birgit.Eisenhaber@nt.imp.univie.ac.at on internet.
    Last modified: 28th January 2003