Promoter predictions
Name: 
First three lines of sequence:
CGCTGGGAGAGCTGCAGAGCCGCGGGCAGAGAAGGAGGCCGCGGCCGAGCCCGGCAGCCCGATACCCCCCATCCG
AGCGACCCCCTTTGGGGCAGGCGGAGAAGGTGGCATAGGCGACCAGGAGGGTTCGCCCACCTGGGACACGCACCC
ACAGTCACCTCCAAAGGACCCCCCCTCCCCAAGTCTCTAGGAGCTGCTCCTTCATCACTGGAGTCGCCCCTACCT


nsite  Wed Feb 28 17:24:51 GMT 2001
 Program  *** N S I T E *** Shahmuradov, Solovyev
           (http://genomic.sanger.ac.uk)

 File with SITEs:     nsite.dat                                                                       
 File with SEQUENCEs: /tmp/gf.seq.17699                                                               
 Search PARAMETRS: Expected. Number -  0.0500000  Siginicance Level -  0.9500000  Print Status - Yes

 Note: AC - Accession no. in TRANSFAC   or  NSITE DB
       DE - Description (gene or gene product)
       RE - Gene region (e.g. promoter,enhancer or unknown)
       BF - Binding factor(s)
       OS - Organism species

 ***************************************************************************
>CGG WEB SERVER PAST Sequence                                         
 Nucleotide Frequencies:  A -  0.16   G -  0.33   T -  0.10   C -  0.41 ... Length =    406

         10        20        30        40        50        60
 cgctgggagagctgcagagccgcgggcagagaaggaggccgcggccgagcccggcagccc
 gcgaccctctcgacgtctcggcgcccgtctcttcctccggcgccggctcgggccgtcggg
         70        80        90       100       110       120
 gataccccccatccgagcgaccccctttggggcaggcggagaaggtggcataggcgacca
 ctatggggggtaggctcgctgggggaaaccccgtccgcctcttccaccgtatccgctggt
        130       140       150       160       170       180
 ggagggttcgcccacctgggacacgcacccacagtcacctccaaaggaccccccctcccc
 cctcccaagcgggtggaccctgtgcgtgggtgtcagtggaggtttcctgggggggagggg
        190       200       210       220       230       240
 aagtctctaggagctgctccttcatcactggagtcgcccctacctctctgcccccagccc
 ttcagagatcctcgacgaggaagtagtgacctcagcggggatggagagacgggggtcggg
        250       260       270       280       290       300
 gagagccccaggcggggacccccggatcggacgtccccaagcctccgggcacctggctca
 ctctcggggtccgcccctgggggcctagcctgcaggggttcggaggcccgtggaccgagt
        310       320       330       340       350       360
 gcaggaggcccccggctcggggcagggcagggccggcggcggcgagccggagcccgcccc
 cgtcctccgggggccgagccccgtcccgtcccggccgccgccgctcggcctcgggcgggg
        370       380       390       400
 ctgcccgggccccgccgagccctcggagcccacccatggggcacct
 gacgggcccggggcggctcgggagcctcgggtgggtaccccgtgga
 ===========================================================================
    33. [  2] T: AC: R00048  / DE: actin (cardiac)                               
 RE: unknown                            / OS: clawed frog, Xenopus laevis        
 BF:  CArG box-binding protein ..  SRF ..                                        

         10
 ccctatttgg
---------- Sites in  1st chain ----------
 Max mismatch :  2
 Exp.Number:    0.048 Conf.Interval:   0 Found:   1
 begin:   81 end:   90 mismatch:   2 exp.num.:   0.046, site:CCCccTTTGG
 ===========================================================================
   220. [  1] T: AC: R00287  / DE: DNA polymerase beta                           
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  Sp1 ..                                                                     

         10        20
 gccccgccccgccccgccc
---------- Sites in  2nd chain ----------
 Max mismatch :  4
 Exp.Number:    0.039 Conf.Interval:   0 Found:   1
 begin:  333 end:  315 mismatch:   4 exp.num.:   0.034, site:GCCCtGCCCtGCCCCGagC
 ===========================================================================
   359. [  1] T: AC: R00479  / DE: c-fos                                         
 RE: unknown                            / OS: mouse, Mus musculus                
 BF:  CRE-BP1 ..  CREB ..                                                        

         10        20
 ccagtgacgtagg
---------- Sites in  2nd chain ----------
 Max mismatch :  3
 Exp.Number:    0.005 Conf.Interval:   0 Found:   1
 begin:  211 end:  199 mismatch:   2 exp.num.:   0.005, site:CCAGTGAtGaAGG
 ===========================================================================
   429. [  1] T: AC: R00560  / DE: gamma-globin                                  
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  CACCC-binding factor ..                                                    

         10        20
 ctccacccatggg
---------- Sites in  1st chain ----------
 Max mismatch :  2
 Exp.Number:    0.015 Conf.Interval:   0 Found:   1
 begin:  388 end:  400 mismatch:   2 exp.num.:   0.014, site:gcCCACCCATGGG
 ===========================================================================
   471. [  1] T: AC: R00621  / DE: growth hormone                                
 RE: unknown                            / OS: rat, Rattus norvegicus             
 BF:  T3R ..                                                                     

         10        20
 ggagccttggggtc
---------- Sites in  2nd chain ----------
 Max mismatch :  3
 Exp.Number:    0.009 Conf.Interval:   0 Found:   1
 begin:  286 end:  273 mismatch:   2 exp.num.:   0.009, site:GGAGgCTTGGGGaC
 ===========================================================================
   678. [  1] T: AC: R00959  / DE: c-jun                                         
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  AP-2alphaB ..  AP-2alphaA ..                                               

         10        20
 cccgccgccggcc
---------- Sites in  2nd chain ----------
 Max mismatch :  3
 Exp.Number:    0.013 Conf.Interval:   0 Found:   1
 begin:  343 end:  331 mismatch:   1 exp.num.:   0.013, site:gCCGCCGCCGGCC
 ===========================================================================
   798. [  1] T: AC: R01163  / DE: MBP (myelin basic protein)                    
 RE: unknown                            / OS: mouse, Mus musculus                
 BF:  M1 ..  M1 ..                                                               

         10        20
 cccagctgacccag
---------- Sites in  2nd chain ----------
 Max mismatch :  3
 Exp.Number:    0.028 Conf.Interval:   0 Found:   1
 begin:  306 end:  293 mismatch:   3 exp.num.:   0.026, site:tCCtGCTGAgCCAG
 ===========================================================================
   868. [  1] T: AC: R01259  / DE: proenkephalin                                 
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  AP-4 ..                                                                    

         10        20
 tgcgtcagctgcag
---------- Sites in  1st chain ----------
 Max mismatch :  3
 Exp.Number:    0.020 Conf.Interval:   0 Found:   1
 begin:    4 end:   17 mismatch:   3 exp.num.:   0.019, site:TGgGagAGCTGCAG
 ===========================================================================
   959. [  1] T: AC: R01423  / DE: T cell receptor alpha locus                   
 RE: unknown                            / OS: mouse, Mus musculus                
 BF:  NFalpha2 ..                                                                

         10        20
 actgcagtgccg
---------- Sites in  1st chain ----------
 Max mismatch :  2
 Exp.Number:    0.027 Conf.Interval:   0 Found:   1
 begin:   11 end:   22 mismatch:   2 exp.num.:   0.026, site:gCTGCAGaGCCG
 ===========================================================================
   971. [  1] T: AC: R01438  / DE: Tg (thyroglobulin)                            
 RE: unknown                            / OS: rat, Rattus norvegicus             
 BF: unknown                                                                     

         10
 actcaagt
---------- Sites in  2nd chain ----------
 Max mismatch :  1
 Exp.Number:    0.019 Conf.Interval:   0 Found:   1
 begin:  214 end:  207 mismatch:   1 exp.num.:   0.018, site:ACTCcAGT
 ===========================================================================
  1037. [  2] T: AC: R01537  / DE: uPA (urokinase-type plasminogen activato      
 RE: unknown                            / OS: domestic pig, Sus scrofa           
 BF: unknown                                                                     

         10
 tgagaaagag
---------- Sites in  1st chain ----------
 Max mismatch :  2
 Exp.Number:    0.044 Conf.Interval:   0 Found:   1
 begin:   28 end:   37 mismatch:   2 exp.num.:   0.042, site:aGAGAAgGAG
 ===========================================================================
  1041. [  1] T: AC: R01548  / DE: uteroglobin                                   
 RE: unknown                            / OS: rabbit, Oryctolagus cuniculus      
 BF:  PR ..                                                                      

         10
 agtccttt
---------- Sites in  2nd chain ----------
 Max mismatch :  1
 Exp.Number:    0.044 Conf.Interval:   0 Found:   1
 begin:  170 end:  163 mismatch:   1 exp.num.:   0.043, site:gGTCCTTT
 ===========================================================================
  1049. [  1] T: AC: R01563  / DE: vasopressin                                   
 RE: unknown                            / OS: rat, Rattus norvegicus             
 BF:  AP-2 ..                                                                    

         10
 tccccaggtc
---------- Sites in  1st chain ----------
 Max mismatch :  1
 Exp.Number:    0.028 Conf.Interval:   0 Found:   1
 begin:  176 end:  185 mismatch:   1 exp.num.:   0.027, site:TCCCCAaGTC
 ===========================================================================
  1114. [  1] T: AC: R01648  / DE: RadLV                                         
 RE: unknown                            / OS: RadLV (BL/VL3 Kaplan radiation leuk
 BF:  Rad-1 ..                                                                   

         10
 gcacctg
---------- Sites in  1st chain ----------
 Max mismatch :  0
 Exp.Number:    0.047 Conf.Interval:   0 Found:   1
 begin:  289 end:  295 mismatch:   0 exp.num.:   0.047, site:GCACCTG
 ===========================================================================
  1175. [  1] T: AC: R01730  / DE: TGF-beta1 (transforming growth factor-be      
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  AP-1 ..                                                                    

         10
 tgagactt
---------- Sites in  2nd chain ----------
 Max mismatch :  1
 Exp.Number:    0.035 Conf.Interval:   0 Found:   1
 begin:  188 end:  181 mismatch:   1 exp.num.:   0.035, site:aGAGACTT
 ===========================================================================
  1196. [  1] T: AC: R01756  / DE: alpha-actin (cardiac)                         
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  Sp1 ..                                                                     

         10        20
 gcccctcccca
---------- Sites in  1st chain ----------
 Max mismatch :  1
 Exp.Number:    0.049 Conf.Interval:   0 Found:   1
 begin:  171 end:  181 mismatch:   1 exp.num.:   0.047, site:cCCCCTCCCCA
 ===========================================================================
  1374. [  1] T: AC: R02003  / DE: E1A                                           
 RE: unknown                            / OS: adenovirus type 5                  
 BF: unknown                                                                     

         10
 tctcaggtg
---------- Sites in  2nd chain ----------
 Max mismatch :  2
 Exp.Number:    0.043 Conf.Interval:   0 Found:   1
 begin:  141 end:  133 mismatch:   1 exp.num.:   0.041, site:TCcCAGGTG
 ===========================================================================
  1414. [  1] T: AC: R02063  / DE: eve (even-skipped)                            
 RE: unknown                            / OS: fruit fly, Drosophila melanogaster 
 BF:  GAGA factor ..                                                             

         10        20
 taactctcagcacc
---------- Sites in  1st chain ----------
 Max mismatch :  3
 Exp.Number:    0.010 Conf.Interval:   0 Found:   1
 begin:  221 end:  234 mismatch:   3 exp.num.:   0.010, site:TAcCTCTCtGCcCC
 ===========================================================================
  1455. [  2] T: AC: R02113  / DE: artificial sequence                           
 RE: unknown                            / OS: empty                              
 BF:  Sp1 ..                                                                     

         10
 ggggcmgggc
---------- Sites in  1st chain ----------
 Max mismatch :  0
 Exp.Number:    0.016 Conf.Interval:   0 Found:   1
 begin:  319 end:  328 mismatch:   0 exp.num.:   0.016, site:GGGGCAGGGC
 ===========================================================================
  1538. [  3] T: AC: R02259  / DE: consensus                                     
 RE: unknown                            / OS: empty                              
 BF:  USF ..  USF ..  USF ..  USF ..  USF ..  USF ..  USF ..                     

         10        20
 grvcacvtgrc
---------- Sites in  1st chain ----------
 Max mismatch :  0
 Exp.Number:    0.009 Conf.Interval:   0 Found:   1
 begin:  287 end:  297 mismatch:   0 exp.num.:   0.009, site:GGGCACCTGGC
 ===========================================================================
  1548. [  1] T: AC: R02271  / DE: Kr (Krueppel)                                 
 RE: unknown                            / OS: fruit fly, Drosophila melanogaster 
 BF:  GAGA factor ..                                                             

         10        20
 aatctctctacc
---------- Sites in  1st chain ----------
 Max mismatch :  3
 Exp.Number:    0.044 Conf.Interval:   0 Found:   1
 begin:  221 end:  232 mismatch:   3 exp.num.:   0.041, site:tAcCTCTCTgCC
 ===========================================================================
  1586. [  2] T: AC: R02322  / DE: TOP1                                          
 RE: unknown                            / OS: yeast, Saccharomyces cerevisiae    
 BF:  repressor of CAR1 expression ..                                            

         10        20
 skctagccgccgacgmc
---------- Sites in  2nd chain ----------
 Max mismatch :  4
 Exp.Number:    0.016 Conf.Interval:   0 Found:   1
 begin:  348 end:  332 mismatch:   3 exp.num.:   0.015, site:GGCTcGCCGCCGcCGgC
 ===========================================================================
  1590. [  1] T: AC: R02327  / DE: ILV2                                          
 RE: unknown                            / OS: yeast, Saccharomyces cerevisiae    
 BF:  repressor of CAR1 expression ..                                            

         10        20
 gcctagccgccggagcc
---------- Sites in  1st chain ----------
 Max mismatch :  3
 Exp.Number:    0.011 Conf.Interval:   0 Found:   1
 begin:  374 end:  390 mismatch:   3 exp.num.:   0.010, site:GCCgAGCCctCGGAGCC
 ===========================================================================
  1668. [  1] T: AC: R02417  / DE: PYK1 (pyruvate kinase)                        
 RE: unknown                            / OS: yeast, Saccharomyces cerevisiae    
 BF:  BAF1 ..  RAP1 ..                                                           

         10        20
 atctctcgcaacg
---------- Sites in  2nd chain ----------
 Max mismatch :  3
 Exp.Number:    0.022 Conf.Interval:   0 Found:   1
 begin:   13 end:    1 mismatch:   3 exp.num.:   0.021, site:AgCTCTCcCAgCG
 ===========================================================================
  1674. [  1] T: AC: R02424  / DE: CRE-BP1                                       
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  Sp1 ..                                                                     

         10        20
 gcaaactccgcctcccccaa
---------- Sites in  2nd chain ----------
 Max mismatch :  5
 Exp.Number:    0.001 Conf.Interval:   0 Found:   1
 begin:  106 end:   87 mismatch:   5 exp.num.:   0.001, site:aCcttCTCCGCCTgCCCCAA
 ===========================================================================
  1675. [  1] T: AC: R02425  / DE: CRE-BP1                                       
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  AP-2alphaA ..  AP-2alphaB ..                                               

         10        20        30
 ccccgcctcaggctcccgggg
---------- Sites in  2nd chain ----------
 Max mismatch :  5
 Exp.Number:    0.017 Conf.Interval:   0 Found:   1
 begin:  257 end:  237 mismatch:   4 exp.num.:   0.002, site:CCCCGCCTggGGCTCtCGGGc
 ===========================================================================
  1722. [  1] T: AC: R02476  / DE: Sh (Shrunken)                                 
 RE: unknown                            / OS: maize, Zea mays                    
 BF:  Zmhox1a ..                                                                 

         10        20
 taggagcagct
---------- Sites in  1st chain ----------
 Max mismatch :  2
 Exp.Number:    0.029 Conf.Interval:   0 Found:   1
 begin:  188 end:  198 mismatch:   1 exp.num.:   0.001, site:TAGGAGCtGCT
---------- Sites in  2nd chain ----------
 Max mismatch :  2
 Exp.Number:    0.030 Conf.Interval:   0 Found:   1
 begin:  202 end:  192 mismatch:   1 exp.num.:   0.001, site:aAGGAGCAGCT
 ===========================================================================
  1776. [  1] T: AC: R02565  / DE: CPSI (carbamyl phosphate synthetase I))       
 RE: 3'-UTR                             / OS: human, Homo sapiens                
 BF: unknown                                                                     

         10        20
 cattcatctctc
---------- Sites in  1st chain ----------
 Max mismatch :  3
 Exp.Number:    0.032 Conf.Interval:   0 Found:   1
 begin:  199 end:  210 mismatch:   3 exp.num.:   0.030, site:CcTTCATCaCTg
 ===========================================================================
  1778. [  1] T: AC: R02568  / DE: alpha1(I) collagen                            
 RE: 3'-UTR                             / OS: human, Homo sapiens                
 BF: unknown                                                                     

         10
 tctccca
---------- Sites in  2nd chain ----------
 Max mismatch :  1
 Exp.Number:    0.012 Conf.Interval:   0 Found:   1
 begin:   10 end:    4 mismatch:   0 exp.num.:   0.012, site:TCTCCCA
 ===========================================================================
  1784. [  1] T: AC: R02581  / DE: lysozyme                                      
 RE: unknown                            / OS: chick, Gallus gallus               
 BF: unknown                                                                     

         10        20
 gaatgaggaact
---------- Sites in  2nd chain ----------
 Max mismatch :  3
 Exp.Number:    0.027 Conf.Interval:   0 Found:   1
 begin:  203 end:  192 mismatch:   3 exp.num.:   0.025, site:GAAgGAGcAgCT
 ===========================================================================
  1969. [  1] T: AC: R02827  / DE: gamma-globin (Agamma-globin)                  
 RE: unknown                            / OS: human, Homo sapiens                
 BF: unknown                                                                     

         10        20
 ggggaggtggggac
---------- Sites in  2nd chain ----------
 Max mismatch :  3
 Exp.Number:    0.020 Conf.Interval:   0 Found:   1
 begin:  180 end:  167 mismatch:   2 exp.num.:   0.019, site:GGGGAGGgGGGGtC
 ===========================================================================
  1994. [  1] T: AC: R02858  / DE: TPI (triosephosphate isomerase)               
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  Sp1 ..                                                                     

         10        20
 agggcgggcgg
---------- Sites in  1st chain ----------
 Max mismatch :  1
 Exp.Number:    0.039 Conf.Interval:   0 Found:   1
 begin:  329 end:  339 mismatch:   1 exp.num.:   0.037, site:AGGGCcGGCGG
 ===========================================================================
  2093. [  1] T: AC: R02983  / DE: histone H4 (early gene, EH4)                  
 RE: unknown                            / OS: sea urchin, Strongylocentrotus purp
 BF:  UHF-1 ..                                                                   

         10        20
 agggggcgcactc
---------- Sites in  2nd chain ----------
 Max mismatch :  3
 Exp.Number:    0.026 Conf.Interval:   0 Found:   1
 begin:  362 end:  350 mismatch:   2 exp.num.:   0.024, site:AGGGGGCGggCTC
 ===========================================================================
  2199. [  1] T: AC: R03109  / DE: alpha-actin (cardiac)                         
 RE: unknown                            / OS: chick, Gallus gallus               
 BF:  E12 ..  MyoD ..  myogenin ..                                               

         10        20
 cacctgccttagatgg
---------- Sites in  1st chain ----------
 Max mismatch :  4
 Exp.Number:    0.010 Conf.Interval:   0 Found:   1
 begin:  290 end:  305 mismatch:   4 exp.num.:   0.010, site:CACCTGgCTcAGcaGG
 ===========================================================================
  2206. [  1] T: AC: R03117  / DE: epsilon-globin                                
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  epsilonF1 ..                                                               

         10        20
 catccatcactgc
---------- Sites in  1st chain ----------
 Max mismatch :  3
 Exp.Number:    0.046 Conf.Interval:   0 Found:   1
 begin:  199 end:  211 mismatch:   3 exp.num.:   0.043, site:CcTtCATCACTGg
---------- Sites in  2nd chain ----------
 Max mismatch :  3
 Exp.Number:    0.018 Conf.Interval:   0 Found:   1
 begin:   38 end:   26 mismatch:   3 exp.num.:   0.017, site:CcTCCtTCtCTGC
 ===========================================================================
  2212. [  1] T: AC: R03123  / DE: vitellogenin II                               
 RE: unknown                            / OS: chick, Gallus gallus               
 BF:  Sp1 ..                                                                     

         10
 aggagtgtt
---------- Sites in  1st chain ----------
 Max mismatch :  1
 Exp.Number:    0.005 Conf.Interval:   0 Found:   1
 begin:  120 end:  128 mismatch:   1 exp.num.:   0.005, site:AGGAGgGTT
 ===========================================================================
  2267. [  1] T: AC: R03194  / DE: transferrin                                   
 RE: unknown                            / OS: human, Homo sapiens                
 BF: unknown                                                                     

         10        20
 tcctcccccaaaaggg
---------- Sites in  2nd chain ----------
 Max mismatch :  4
 Exp.Number:    0.012 Conf.Interval:   0 Found:   1
 begin:   97 end:   82 mismatch:   3 exp.num.:   0.001, site:gCCTgCCCCAAAgGGG
 ===========================================================================
  2271. [  1] T: AC: R03198  / DE: metallothionein IG (MT-IG)                    
 RE: unknown                            / OS: human, Homo sapiens                
 BF: unknown                                                                     

         10        20
 cgggctgggtgca
---------- Sites in  2nd chain ----------
 Max mismatch :  3
 Exp.Number:    0.043 Conf.Interval:   0 Found:   1
 begin:  241 end:  229 mismatch:   1 exp.num.:   0.003, site:CGGGCTGGGgGCA
 ===========================================================================
  2360. [  1] T: AC: R03303  / DE: GPIIb (platelet glycoprotein IIb)             
 RE: unknown                            / OS: human, Homo sapiens                
 BF: unknown                                                                     

         10        20
 ggtcctagaaggag
---------- Sites in  1st chain ----------
 Max mismatch :  3
 Exp.Number:    0.011 Conf.Interval:   0 Found:   1
 begin:   24 end:   37 mismatch:   3 exp.num.:   0.011, site:GGgCagAGAAGGAG
 ===========================================================================
  2436. [  1] T: AC: R03399  / DE: sry-beta genomic target pBZ93b                
 RE: unknown                            / OS: fruit fly, Drosophila melanogaster 
 BF:  Sry-beta ..                                                                

         10        20
 ccagtgatgagcg
---------- Sites in  2nd chain ----------
 Max mismatch :  3
 Exp.Number:    0.005 Conf.Interval:   0 Found:   1
 begin:  211 end:  199 mismatch:   2 exp.num.:   0.005, site:CCAGTGATGAagG
 ===========================================================================
  2518. [  1] T: AC: R03504  / DE: TdT (terminal deoxynucleotidyltransferas      
 RE: unknown                            / OS: mouse, Mus musculus                
 BF:  LyF-1 ..                                                                   

         10
 ttcagcagg
---------- Sites in  1st chain ----------
 Max mismatch :  1
 Exp.Number:    0.023 Conf.Interval:   0 Found:   1
 begin:  297 end:  305 mismatch:   1 exp.num.:   0.022, site:cTCAGCAGG
 ===========================================================================
  2680. [  1] T: AC: R03696  / DE: IL-2 (interleukin-2)                          
 RE: unknown                            / OS: mouse, Mus musculus                
 BF:  TCF-2 ..  AP-3 (2) ..  TCF-1 ..                                            

         10
 gggctaaccc
---------- Sites in  2nd chain ----------
 Max mismatch :  2
 Exp.Number:    0.018 Conf.Interval:   0 Found:   1
 begin:  133 end:  124 mismatch:   1 exp.num.:   0.018, site:GGGCgAACCC
 ===========================================================================
  2752. [  1] T: AC: R03787  / DE: TIP1                                          
 RE: unknown                            / OS: yeast, Saccharomyces cerevisiae    
 BF: unknown                                                                     

         10        20
 gtttccattcatccgagcga
---------- Sites in  1st chain ----------
 Max mismatch :  5
 Exp.Number:    0.000 Conf.Interval:   0 Found:   1
 begin:   61 end:   80 mismatch:   5 exp.num.:   0.000, site:GaTaCCcccCATCCGAGCGA
 ===========================================================================
  2777. [  1] T: AC: R03820  / DE: CHA1 (catabolic L-serine (L-threonine) d      
 RE: unknown                            / OS: yeast, Saccharomyces cerevisiae    
 BF:  BAF1 ..                                                                    

         10        20
 aatcaccgcgaacgga
---------- Sites in  1st chain ----------
 Max mismatch :  4
 Exp.Number:    0.024 Conf.Interval:   0 Found:   1
 begin:  153 end:  168 mismatch:   4 exp.num.:   0.022, site:AgTCACCtCcAAaGGA
 ===========================================================================
  2876. [  1] T: AC: R03929  / DE: RAR-gamma2 (retinoic acid receptor gamma      
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  RAR-gamma ..  RAR-beta ..  RXR-alpha ..  RAR-alpha1 ..                     

         10        20
 gggtcaggaggaggtga
---------- Sites in  2nd chain ----------
 Max mismatch :  4
 Exp.Number:    0.016 Conf.Interval:   0 Found:   1
 begin:  171 end:  155 mismatch:   4 exp.num.:   0.014, site:GGGTCctttGGAGGTGA
 ===========================================================================
  2899. [  1] T: AC: R03960  / DE: EGF receptor                                  
 RE: unknown                            / OS: human, Homo sapiens                
 BF:  T3R-beta ..  RXR-alpha ..                                                  

         10        20
 gtccccgcctc
---------- Sites in  2nd chain ----------
 Max mismatch :  2
 Exp.Number:    0.021 Conf.Interval:   0 Found:   1
 begin:  259 end:  249 mismatch:   1 exp.num.:   0.021, site:GTCCCCGCCTg
 ===========================================================================
  3192. [  1] T: AC: R04326  / DE: HNF-3beta                                     
 RE: unknown                            / OS: mouse, Mus musculus                
 BF:  UF2-H3beta ..                                                              

         10        20
 agtaaccttgaa
---------- Sites in  1st chain ----------
 Max mismatch :  3
 Exp.Number:    0.020 Conf.Interval:   0 Found:   1
 begin:  153 end:  164 mismatch:   3 exp.num.:   0.019, site:AGTcACCTccAA
 ===========================================================================
  3529. [  1] N: ARGRI (ARG80), S.cer., NAR (1993), 21(24),5537-5546             
                                                                                 
                                                                                 

         10
 cctctaaagg
---------- Sites in  1st chain ----------
 Max mismatch :  1
 Exp.Number:    0.005 Conf.Interval:   0 Found:   1
 begin:  158 end:  167 mismatch:   1 exp.num.:   0.005, site:CCTCcAAAGG
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