Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1031943037-019052-32290 Query= cSEF_310-450 (141 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,044,513 sequences; 330,426,180 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Results of PSI-Blast iteration 2 Skip to the first new sequence Taxonomy reports
RID: 1031943037-019052-32290
Query= cSEF_310-450 (141 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,044,513 sequences; 330,426,180 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs
Taxonomy reports
Legend: - means that the alignment score was below the threshold on the previous iteration - means that the alignment was checked on the previous iteration Hit list size Sequences with E-value BETTER than threshold Score E Sequences producing significant alignments: (bits) Value gi|20872095|ref|XP_127630.1| (XM_127630) similar expression to F... 237 2e-62 gi|20799328|gb|AAM28441.1|AF459444_1 (AF459444) transmembrane pr... 237 3e-62 gi|18845019|gb|AAL79530.1|AF424804_1 (AF424804) similar expressi... 235 8e-62 gi|21667506|gb|AAM74078.1|AF494209_1 (AF494209) interleukin 17 r... 235 1e-61 gi|21667504|gb|AAM74077.1|AF494208_1 (AF494208) interleukin 17 r... 221 1e-57 gi|21779863|gb|AAM77571.1|AF458067_1 (AF458067) IL-17RD [Homo sa... 221 1e-57 gi|14726669|ref|XP_045300.1| (XM_045300) similar to peptidyl-Pro... 220 2e-57 gi|21667510|gb|AAM74080.1|AF494211_1 (AF494211) interleukin 17 r... 220 3e-57 gi|11360138|pir||T42695 hypothetical protein DKFZp434N1928.1 - h... 220 3e-57 gi|18623501|gb|AAL76112.1|AF364103_1 (AF364103) Sef [Danio rerio] 211 1e-54 gi|18765887|gb|AAL78817.1|AF401232_1 (AF401232) FGF signaling an... 210 2e-54 gi|9246433|gb|AAF86051.1|AF208110_1 (AF208110) IL-17 receptor ho... 169 3e-42 gi|21263748|sp|Q9NRM6|I17S_HUMAN Interleukin-17B receptor precur... 169 4e-42 gi|2826476|gb|AAB99730.1| (U58917) IL-17 receptor [Homo sapiens] 158 9e-39 gi|21361425|ref|NP_055154.2| (NM_014339) interleukin 17 receptor... 158 1e-38 gi|20872223|ref|XP_127670.1| (XM_127670) similar to IL-17 recept... 144 2e-34 gi|6680411|ref|NP_032385.1| (NM_008359) interleukin 17 receptor ... 141 2e-33 gi|8923817|ref|NP_061195.1| (NM_018725) IL-17B receptor [Homo sa... 136 3e-32 gi|17543896|ref|NP_502736.1| (NM_070335) Y64G10A.6.p [Caenorhabd... 41 0.002 Sequences with E-value WORSE than threshold gi|21751615|dbj|BAC04001.1| (AK092907) unnamed protein product [... 37 0.029 gi|21779857|gb|AAM77569.1|AF458065_1 (AF458065) IL-17RC [Homo sa... 37 0.033 gi|18148891|dbj|BAB83481.1| (AB063171) ORF22 [Staphylococcus hom... 34 0.35 gi|9625624|ref|NP_039875.1| (NC_001345) nuclear antigen EBNA1 [H... 30 5.6 gi|1942763|pdb|1VHI|A Chain A, Epstein Barr Virus Nuclear Antige... 30 6.2 gi|710376|gb|AAA67277.1| (U21195) nuclear antigen EBNA-1 [Human ... 29 6.3 gi|710394|gb|AAA67286.1| (U21204) nuclear antigen EBNA-1 [Human ... 29 6.3 gi|15903447|ref|NP_358997.1| (NC_003098) Conserved hypothetical ... 29 6.6 gi|4139575|pdb|1B3T|A Chain A, Ebna-1 Nuclear ProteinDNA COMPLEX... 29 7.0 gi|16078188|ref|NP_389005.1| (NC_000964) carbamoyl-phosphate tra... 29 7.7 gi|417097|sp|P32073|GUAA_DICDI GMP synthase [glutamine-hydrolyzi... 29 8.0 gi|20830926|ref|XP_132775.1| (XM_132775) hypothetical protein XP... 29 9.7 gi|20071315|gb|AAH26737.1| (BC026737) Unknown (protein for MGC:3... 29 9.9 Alignments
Legend:
- means that the alignment score was below the threshold on the previous iteration
- means that the alignment was checked on the previous iteration
gi|20872095|ref|XP_127630.1| (XM_127630) similar expression to F... 237 2e-62 gi|20799328|gb|AAM28441.1|AF459444_1 (AF459444) transmembrane pr... 237 3e-62 gi|18845019|gb|AAL79530.1|AF424804_1 (AF424804) similar expressi... 235 8e-62 gi|21667506|gb|AAM74078.1|AF494209_1 (AF494209) interleukin 17 r... 235 1e-61 gi|21667504|gb|AAM74077.1|AF494208_1 (AF494208) interleukin 17 r... 221 1e-57 gi|21779863|gb|AAM77571.1|AF458067_1 (AF458067) IL-17RD [Homo sa... 221 1e-57 gi|14726669|ref|XP_045300.1| (XM_045300) similar to peptidyl-Pro... 220 2e-57 gi|21667510|gb|AAM74080.1|AF494211_1 (AF494211) interleukin 17 r... 220 3e-57 gi|11360138|pir||T42695 hypothetical protein DKFZp434N1928.1 - h... 220 3e-57 gi|18623501|gb|AAL76112.1|AF364103_1 (AF364103) Sef [Danio rerio] 211 1e-54 gi|18765887|gb|AAL78817.1|AF401232_1 (AF401232) FGF signaling an... 210 2e-54 gi|9246433|gb|AAF86051.1|AF208110_1 (AF208110) IL-17 receptor ho... 169 3e-42 gi|21263748|sp|Q9NRM6|I17S_HUMAN Interleukin-17B receptor precur... 169 4e-42 gi|2826476|gb|AAB99730.1| (U58917) IL-17 receptor [Homo sapiens] 158 9e-39 gi|21361425|ref|NP_055154.2| (NM_014339) interleukin 17 receptor... 158 1e-38 gi|20872223|ref|XP_127670.1| (XM_127670) similar to IL-17 recept... 144 2e-34 gi|6680411|ref|NP_032385.1| (NM_008359) interleukin 17 receptor ... 141 2e-33 gi|8923817|ref|NP_061195.1| (NM_018725) IL-17B receptor [Homo sa... 136 3e-32 gi|17543896|ref|NP_502736.1| (NM_070335) Y64G10A.6.p [Caenorhabd... 41 0.002
gi|21751615|dbj|BAC04001.1| (AK092907) unnamed protein product [... 37 0.029 gi|21779857|gb|AAM77569.1|AF458065_1 (AF458065) IL-17RC [Homo sa... 37 0.033 gi|18148891|dbj|BAB83481.1| (AB063171) ORF22 [Staphylococcus hom... 34 0.35 gi|9625624|ref|NP_039875.1| (NC_001345) nuclear antigen EBNA1 [H... 30 5.6 gi|1942763|pdb|1VHI|A Chain A, Epstein Barr Virus Nuclear Antige... 30 6.2 gi|710376|gb|AAA67277.1| (U21195) nuclear antigen EBNA-1 [Human ... 29 6.3 gi|710394|gb|AAA67286.1| (U21204) nuclear antigen EBNA-1 [Human ... 29 6.3 gi|15903447|ref|NP_358997.1| (NC_003098) Conserved hypothetical ... 29 6.6 gi|4139575|pdb|1B3T|A Chain A, Ebna-1 Nuclear ProteinDNA COMPLEX... 29 7.0 gi|16078188|ref|NP_389005.1| (NC_000964) carbamoyl-phosphate tra... 29 7.7 gi|417097|sp|P32073|GUAA_DICDI GMP synthase [glutamine-hydrolyzi... 29 8.0 gi|20830926|ref|XP_132775.1| (XM_132775) hypothetical protein XP... 29 9.7 gi|20071315|gb|AAH26737.1| (BC026737) Unknown (protein for MGC:3... 29 9.9
>gi|20872095|ref|XP_127630.1| (XM_127630) similar expression to Fgf genes [Mus musculus] Length = 710 Score = 237 bits (604), Expect = 2e-62 Identities = 101/142 (71%), Positives = 124/142 (87%), Gaps = 1/142 (0%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 LRP+PKVF+CYS+KD Q H+NV+QCFAYFLQDFCGCEVALDLWED +C+E Q+EW I+K Sbjct: 324 LRPQPKVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWAIQK 383 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSN-D 119 I+ESQFII+VCSKGMKYFV+KKN++H+G ++ +GE FL AV +AEKLRQAKQ+S+ Sbjct: 384 IHESQFIIVVCSKGMKYFVDKKNFRHKGGSRGEAQGEFFLVAVAAIAEKLRQAKQSSSAA 443 Query: 120 LCKFIAVYFDYSCEGDIPGTLD 141 L KFIAVYFDYSCEGD+P +LD Sbjct: 444 LRKFIAVYFDYSCEGDVPCSLD 465
>gi|20799328|gb|AAM28441.1|AF459444_1 (AF459444) transmembrane protein [Mus musculus] gi|21667508|gb|AAM74079.1|AF494210_1 (AF494210) interleukin 17 receptor-like protein long form [Mus musculus] Length = 738 Score = 237 bits (604), Expect = 3e-62 Identities = 101/142 (71%), Positives = 124/142 (87%), Gaps = 1/142 (0%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 LRP+PKVF+CYS+KD Q H+NV+QCFAYFLQDFCGCEVALDLWED +C+E Q+EW I+K Sbjct: 352 LRPQPKVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWAIQK 411 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSN-D 119 I+ESQFII+VCSKGMKYFV+KKN++H+G ++ +GE FL AV +AEKLRQAKQ+S+ Sbjct: 412 IHESQFIIVVCSKGMKYFVDKKNFRHKGGSRGEAQGEFFLVAVAAIAEKLRQAKQSSSAA 471 Query: 120 LCKFIAVYFDYSCEGDIPGTLD 141 L KFIAVYFDYSCEGD+P +LD Sbjct: 472 LRKFIAVYFDYSCEGDVPCSLD 493
>gi|18845019|gb|AAL79530.1|AF424804_1 (AF424804) similar expression to FGF protein [Mus musculus] Length = 582 Score = 235 bits (599), Expect = 8e-62 Identities = 101/142 (71%), Positives = 124/142 (87%), Gaps = 1/142 (0%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 LRP+PKVF+CYS+KD Q H+NV+QCFAYFLQDFCGCEVALDLWED +C+E Q+EW I+K Sbjct: 196 LRPQPKVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWAIQK 255 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSN-D 119 I+ESQFII+VCSKGMKYFV+KKN++H+G ++ +GE FL AV +AEKLRQAKQ+S+ Sbjct: 256 IHESQFIIVVCSKGMKYFVDKKNFRHKGGSRGEAQGEFFLVAVAAIAEKLRQAKQSSSAA 315 Query: 120 LCKFIAVYFDYSCEGDIPGTLD 141 L KFIAVYFDYSCEGD+P +LD Sbjct: 316 LRKFIAVYFDYSCEGDVPCSLD 337
>gi|21667506|gb|AAM74078.1|AF494209_1 (AF494209) interleukin 17 receptor-like protein short form [Mus musculus] Length = 594 Score = 235 bits (599), Expect = 1e-61 Identities = 101/142 (71%), Positives = 124/142 (87%), Gaps = 1/142 (0%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 LRP+PKVF+CYS+KD Q H+NV+QCFAYFLQDFCGCEVALDLWED +C+E Q+EW I+K Sbjct: 208 LRPQPKVFLCYSNKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWAIQK 267 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSN-D 119 I+ESQFII+VCSKGMKYFV+KKN++H+G ++ +GE FL AV +AEKLRQAKQ+S+ Sbjct: 268 IHESQFIIVVCSKGMKYFVDKKNFRHKGGSRGEAQGEFFLVAVAAIAEKLRQAKQSSSAA 327 Query: 120 LCKFIAVYFDYSCEGDIPGTLD 141 L KFIAVYFDYSCEGD+P +LD Sbjct: 328 LRKFIAVYFDYSCEGDVPCSLD 349
>gi|21667504|gb|AAM74077.1|AF494208_1 (AF494208) interleukin 17 receptor-like protein long form [Homo sapiens] Length = 739 Score = 221 bits (563), Expect = 1e-57 Identities = 108/142 (76%), Positives = 127/142 (89%), Gaps = 1/142 (0%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 LRPRPKVF+CYSSKD Q H+NV+QCFAYFLQDFCGCEVALDLWED +C+E Q+EW+I+K Sbjct: 352 LRPRPKVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWVIQK 411 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSN-D 119 I+ESQFII+VCSKGMKYFV+KKN+KH+G + +GKGELFL AV +AEKLRQAKQ+S+ Sbjct: 412 IHESQFIIVVCSKGMKYFVDKKNYKHKGGGRGSGKGELFLVAVSAIAEKLRQAKQSSSAA 471 Query: 120 LCKFIAVYFDYSCEGDIPGTLD 141 L KFIAVYFDYSCEGD+PG LD Sbjct: 472 LSKFIAVYFDYSCEGDVPGILD 493
>gi|21779863|gb|AAM77571.1|AF458067_1 (AF458067) IL-17RD [Homo sapiens] Length = 739 Score = 221 bits (563), Expect = 1e-57 Identities = 108/142 (76%), Positives = 127/142 (89%), Gaps = 1/142 (0%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 LRPRPKVF+CYSSKD Q H+NV+QCFAYFLQDFCGCEVALDLWED +C+E Q+EW+I+K Sbjct: 352 LRPRPKVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWVIQK 411 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSN-D 119 I+ESQFII+VCSKGMKYFV+KKN+KH+G + +GKGELFL AV +AEKLRQAKQ+S+ Sbjct: 412 IHESQFIIVVCSKGMKYFVDKKNYKHKGGGRGSGKGELFLVAVSAIAEKLRQAKQSSSAA 471 Query: 120 LCKFIAVYFDYSCEGDIPGTLD 141 L KFIAVYFDYSCEGD+PG LD Sbjct: 472 LSKFIAVYFDYSCEGDVPGILD 493
>gi|14726669|ref|XP_045300.1| (XM_045300) similar to peptidyl-Pro cis trans isomerase [Homo sapiens] Length = 526 Score = 220 bits (561), Expect = 2e-57 Identities = 108/142 (76%), Positives = 127/142 (89%), Gaps = 1/142 (0%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 LRPRPKVF+CYSSKD Q H+NV+QCFAYFLQDFCGCEVALDLWED +C+E Q+EW+I+K Sbjct: 139 LRPRPKVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWVIQK 198 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSN-D 119 I+ESQFII+VCSKGMKYFV+KKN+KH+G + +GKGELFL AV +AEKLRQAKQ+S+ Sbjct: 199 IHESQFIIVVCSKGMKYFVDKKNYKHKGGGRGSGKGELFLVAVSAIAEKLRQAKQSSSAA 258 Query: 120 LCKFIAVYFDYSCEGDIPGTLD 141 L KFIAVYFDYSCEGD+PG LD Sbjct: 259 LSKFIAVYFDYSCEGDVPGILD 280
>gi|21667510|gb|AAM74080.1|AF494211_1 (AF494211) interleukin 17 receptor-like protein short form [Homo sapiens] gi|21739454|emb|CAD38769.1| (AL833913) hypothetical protein [Homo sapiens] Length = 595 Score = 220 bits (560), Expect = 3e-57 Identities = 108/142 (76%), Positives = 127/142 (89%), Gaps = 1/142 (0%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 LRPRPKVF+CYSSKD Q H+NV+QCFAYFLQDFCGCEVALDLWED +C+E Q+EW+I+K Sbjct: 208 LRPRPKVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWVIQK 267 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSN-D 119 I+ESQFII+VCSKGMKYFV+KKN+KH+G + +GKGELFL AV +AEKLRQAKQ+S+ Sbjct: 268 IHESQFIIVVCSKGMKYFVDKKNYKHKGGGRGSGKGELFLVAVSAIAEKLRQAKQSSSAA 327 Query: 120 LCKFIAVYFDYSCEGDIPGTLD 141 L KFIAVYFDYSCEGD+PG LD Sbjct: 328 LSKFIAVYFDYSCEGDVPGILD 349
>gi|11360138|pir||T42695 hypothetical protein DKFZp434N1928.1 - human (fragment) gi|6453552|emb|CAB61408.1| (AL133097) hypothetical protein [Homo sapiens] Length = 564 Score = 220 bits (560), Expect = 3e-57 Identities = 108/142 (76%), Positives = 127/142 (89%), Gaps = 1/142 (0%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 LRPRPKVF+CYSSKD Q H+NV+QCFAYFLQDFCGCEVALDLWED +C+E Q+EW+I+K Sbjct: 177 LRPRPKVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWVIQK 236 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSN-D 119 I+ESQFII+VCSKGMKYFV+KKN+KH+G + +GKGELFL AV +AEKLRQAKQ+S+ Sbjct: 237 IHESQFIIVVCSKGMKYFVDKKNYKHKGGGRGSGKGELFLVAVSAIAEKLRQAKQSSSAA 296 Query: 120 LCKFIAVYFDYSCEGDIPGTLD 141 L KFIAVYFDYSCEGD+PG LD Sbjct: 297 LSKFIAVYFDYSCEGDVPGILD 318
>gi|18623501|gb|AAL76112.1|AF364103_1 (AF364103) Sef [Danio rerio] Length = 745 Score = 211 bits (537), Expect = 1e-54 Identities = 79/149 (53%), Positives = 109/149 (73%), Gaps = 11/149 (7%) Query: 3 PRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKKIN 62 PRPK+FICYSS+D KH+ VIQ FA+FLQDFCGCEV+LDLWE L+ICKE Q WL ++I+ Sbjct: 353 PRPKIFICYSSRDGAKHLAVIQSFAFFLQDFCGCEVSLDLWEHLEICKEGQMSWLSRRID 412 Query: 63 ESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKG-----------ELFLFAVFTVAEKLR 111 E+ FII VCSKG+K+FVEK++ K + +K+ + +LF+ A ++EKL+ Sbjct: 413 EAHFIITVCSKGLKHFVEKRHRKGKATSKEKNREPSASDSSSSSRDLFIVASAIISEKLK 472 Query: 112 QAKQNSNDLCKFIAVYFDYSCEGDIPGTL 140 + Q S+DL +F++VYFDYS E D+P +L Sbjct: 473 EVHQKSSDLSRFMSVYFDYSHETDVPTSL 501
>gi|18765887|gb|AAL78817.1|AF401232_1 (AF401232) FGF signaling antagonist Sef [Danio rerio] Length = 745 Score = 210 bits (535), Expect = 2e-54 Identities = 79/149 (53%), Positives = 109/149 (73%), Gaps = 11/149 (7%) Query: 3 PRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKKIN 62 PRPK+FICYSS+D KH+ VIQ FA+FLQDFCGCEV+LDLWE L+ICKE Q WL ++I+ Sbjct: 353 PRPKIFICYSSRDGAKHLAVIQSFAFFLQDFCGCEVSLDLWEHLEICKEGQMSWLSRRID 412 Query: 63 ESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKG-----------ELFLFAVFTVAEKLR 111 E+ FII VCSKG+K+FVEK++ K + +K+ + +LF+ A ++EKL+ Sbjct: 413 EAHFIITVCSKGLKHFVEKRHRKGKATSKEKNREPSASDSSSSSRDLFIVASAIISEKLK 472 Query: 112 QAKQNSNDLCKFIAVYFDYSCEGDIPGTL 140 + Q S+DL +F++VYFDYS E D+P +L Sbjct: 473 EVHQKSSDLSRFMSVYFDYSHETDVPTSL 501
>gi|9246433|gb|AAF86051.1|AF208110_1 (AF208110) IL-17 receptor homolog precursor [Homo sapiens] Length = 502 Score = 169 bits (430), Expect = 3e-42 Identities = 35/128 (27%), Positives = 54/128 (41%), Gaps = 7/128 (5%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 L P KV + Y S+ C H I F FLQ+ C EV L+ W+ KI + +WL + Sbjct: 328 LLPPIKVLVVYPSEICFHH--TICYFTEFLQNHCRSEVILEKWQKKKIAEMGPVQWLATQ 385 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSNDL 120 + ++ + S + + K G + + +LF A LR L Sbjct: 386 KKAADKVVFLLSNDVNSVCDGTCGKSEGSPSENSQ-DLFPLAFNLFCSDLRSQIH----L 440 Query: 121 CKFIAVYF 128 K++ VYF Sbjct: 441 HKYVVVYF 448
>gi|21263748|sp|Q9NRM6|I17S_HUMAN Interleukin-17B receptor precursor (IL-17B receptor) (IL-17 receptor homolog 1) (IL-17Rh1) (IL17Rh1) (Cytokine receptor CRL4) gi|12654319|gb|AAH00980.1|AAH00980 (BC000980) Unknown (protein for MGC:5245) [Homo sapiens] gi|13649477|gb|AAK37428.1|AF250309_1 (AF250309) putative cytokine receptor CRL4 precusor [Homo sapiens] Length = 502 Score = 169 bits (430), Expect = 4e-42 Identities = 35/128 (27%), Positives = 54/128 (41%), Gaps = 7/128 (5%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 L P KV + Y S+ C H I F FLQ+ C EV L+ W+ KI + +WL + Sbjct: 328 LLPPIKVLVVYPSEICFHH--TICYFTEFLQNHCRSEVILEKWQKKKIAEMGPVQWLATQ 385 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSNDL 120 + ++ + S + + K G + + +LF A LR L Sbjct: 386 KKAADKVVFLLSNDVNSVCDGTCGKSEGSPSENSQ-DLFPLAFNLFCSDLRSQIH----L 440 Query: 121 CKFIAVYF 128 K++ VYF Sbjct: 441 HKYVVVYF 448
>gi|2826476|gb|AAB99730.1| (U58917) IL-17 receptor [Homo sapiens] Length = 866 Score = 158 bits (401), Expect = 9e-39 Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 25/151 (16%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 L+PR KV+I YS+ D +++V+ FA FL CG EVALDL E+ I + W+ ++ Sbjct: 375 LKPR-KVWIIYSA-DHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVMTWVGRQ 432 Query: 61 INE----SQFIIIVCSKGMKYFVEKKNWK---HRG----VTKDTGK--GELFLFAVFTVA 107 E + II++CS+G + W+ RG + D GK G+LF A+ + Sbjct: 433 KQEMVESNSKIIVLCSRGT-----RAKWQALLGRGAPVRLRCDHGKPVGDLFTAAMNMIL 487 Query: 108 EKLRQAKQNSNDLCKFIAVYF-DYSCEGDIP 137 ++ ++ YF + SC+GD+P Sbjct: 488 PDFKRPAC----FGTYVVCYFSEVSCDGDVP 514
>gi|21361425|ref|NP_055154.2| (NM_014339) interleukin 17 receptor [Homo sapiens] gi|20454982|sp|Q96F46|I17R_HUMAN Interleukin-17 receptor precursor (IL-17 receptor) gi|15079611|gb|AAH11624.1|AAH11624 (BC011624) Similar to interleukin 17 receptor [Homo sapiens] Length = 866 Score = 158 bits (400), Expect = 1e-38 Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 25/151 (16%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 L+PR KV+I YS+ D +++V+ FA FL CG EVALDL E+ I + W+ ++ Sbjct: 375 LKPR-KVWIIYSA-DHPLYVDVVLKFAQFLLTACGTEVALDLLEEQAISEAGVMTWVGRQ 432 Query: 61 INE----SQFIIIVCSKGMKYFVEKKNWK---HRG----VTKDTGK--GELFLFAVFTVA 107 E + II++CS+G + W+ RG + D GK G+LF A+ + Sbjct: 433 KQEMVESNSKIIVLCSRGT-----RAKWQALLGRGAPVRLRCDHGKPVGDLFTAAMNMIL 487 Query: 108 EKLRQAKQNSNDLCKFIAVYF-DYSCEGDIP 137 ++ ++ YF + SC+GD+P Sbjct: 488 PDFKRPAC----FGTYVVCYFSEVSCDGDVP 514
>gi|20872223|ref|XP_127670.1| (XM_127670) similar to IL-17 receptor homolog precursor [Mus musculus] gi|21263743|sp|Q9JIP3|I17S_MOUSE Interleukin-17B receptor precursor (IL-17B receptor) (IL-17 receptor homolog 1) (IL-17Rh1) (IL17Rh1) (IL-17ER) gi|9246429|gb|AAF86049.1|AF208108_1 (AF208108) IL-17 receptor homolog precursor [Mus musculus] gi|20071645|gb|AAH26546.1| (BC026546) interleukin 17B receptor [Mus musculus] Length = 499 Score = 144 bits (363), Expect = 2e-34 Identities = 29/127 (22%), Positives = 52/127 (40%), Gaps = 7/127 (5%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 L P KV + Y S+ C H + F FLQ++C EV L+ W+ KI + +WL + Sbjct: 325 LLPLIKVLVVYPSEICFHH--TVCRFTDFLQNYCRSEVILEKWQKKKIAEMGPVQWLTTQ 382 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGKGELFLFAVFTVAEKLRQAKQNSNDL 120 + ++ + + + + G ++ + +LF A L Sbjct: 383 KQAADKVVFLLPSDVPTLCDSACGHNEGSARENSQ-DLFPLAFNLFCSDFSSQTH----L 437 Query: 121 CKFIAVY 127 K++ VY Sbjct: 438 HKYLVVY 444
>gi|6680411|ref|NP_032385.1| (NM_008359) interleukin 17 receptor [Mus musculus] gi|20454961|sp|Q60943|I17R_MOUSE Interleukin-17 receptor precursor (IL-17 receptor) gi|1161343|gb|AAC52357.1| (U31993) interleukin 17 receptor [Mus musculus] Length = 864 Score = 141 bits (355), Expect = 2e-33 Identities = 47/152 (30%), Positives = 70/152 (45%), Gaps = 26/152 (17%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 LRPR KV+I YS+ D ++ V+ FA FL CG EVALDL E+ I + W+ ++ Sbjct: 377 LRPR-KVWIVYSA-DHPLYVEVVLKFAQFLITACGTEVALDLLEEQVISEVGVMTWVSRQ 434 Query: 61 INE----SQFIIIVCSKGMKYFVEKKNWK--------HRGVTKDTGK--GELFLFAVFTV 106 E + III+CS+G + WK + D K G+LF A+ + Sbjct: 435 KQEMVESNSKIIILCSRGTQ-----AKWKAILGWAEPAVQLRCDHWKPAGDLFTAAMNMI 489 Query: 107 AEKLRQAKQNSNDLCKFIAVYFDYSC-EGDIP 137 ++ ++ YF C E D+P Sbjct: 490 LPDFKRPAC----FGTYVVCYFSGICSERDVP 517
>gi|8923817|ref|NP_061195.1| (NM_018725) IL-17B receptor [Homo sapiens] gi|8705222|gb|AAF78776.1|AF212365_1 (AF212365) IL-17B receptor [Homo sapiens] Length = 426 Score = 136 bits (344), Expect = 3e-32 Identities = 25/95 (26%), Positives = 41/95 (42%), Gaps = 2/95 (2%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 L P KV + Y S+ C H I F FLQ+ C EV L+ W+ KI + +WL + Sbjct: 328 LLPPIKVLVVYPSEICFHH--TICYFTEFLQNHCRSEVILEKWQKKKIAEMGPVQWLATQ 385 Query: 61 INESQFIIIVCSKGMKYFVEKKNWKHRGVTKDTGK 95 + ++ + S + + K G + + Sbjct: 386 KKAADKVVFLLSNDVNSVCDGTCGKSEGSPSENSQ 420
>gi|17543896|ref|NP_502736.1| (NM_070335) Y64G10A.6.p [Caenorhabditis elegans] gi|7510358|pir||T27282 hypothetical protein Y64G10A.e - Caenorhabditis elegans gi|5824840|emb|CAB54470.1| (AL110498) predicted using Genefinder~cDNA EST yk270d3.3 comes from this gene~cDNA EST yk270d3.5 comes from this gene [Caenorhabditis elegans] Length = 846 Score = 41.3 bits (96), Expect = 0.002 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Query: 1 LRPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKK 60 L+ V I YS D +H + FA L+D V LD+W++ I +E++ E++ Sbjct: 473 LKQSISVLIVYS-HDSAQHEAAVLAFAELLRDVFNLNVHLDVWDEDDI-EENRAEYINSS 530 Query: 61 INESQFIIIVCSKG 74 I + +II+ S G Sbjct: 531 IVRANKVIIINSIG 544
>gi|21751615|dbj|BAC04001.1| (AK092907) unnamed protein product [Homo sapiens] Length = 791 Score = 37.5 bits (86), Expect = 0.029 Identities = 15/96 (15%), Positives = 30/96 (30%), Gaps = 8/96 (8%) Query: 38 VALDLWEDLKICKESQKEWLIKKI----NESQFIIIVCSKGMKYFVEKKNWKHRGVTKDT 93 VA+DLW ++ + W + E ++++ S G + Sbjct: 615 VAVDLWSRRELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAVALCSEWLQDGVSGPGAH 674 Query: 94 GKGELFLFAVFTVAEKLRQAKQNSNDLCKFIAVYFD 129 G + F ++ V Q ++ FD Sbjct: 675 GPHDAFRASLSCVLPDFLQ----GRAPGSYVGACFD 706
>gi|21779857|gb|AAM77569.1|AF458065_1 (AF458065) IL-17RC [Homo sapiens] Length = 720 Score = 37.1 bits (85), Expect = 0.033 Identities = 15/96 (15%), Positives = 30/96 (30%), Gaps = 8/96 (8%) Query: 38 VALDLWEDLKICKESQKEWLIKKI----NESQFIIIVCSKGMKYFVEKKNWKHRGVTKDT 93 VA+DLW ++ + W + E ++++ S G + Sbjct: 544 VAVDLWSRRELSAQGPVAWFHAQRRQTLQEGGVVVLLFSPGAVALCSEWLQDGVSGPGAH 603 Query: 94 GKGELFLFAVFTVAEKLRQAKQNSNDLCKFIAVYFD 129 G + F ++ V Q ++ FD Sbjct: 604 GPHDAFRASLSCVLPDFLQ----GRAPGSYVGACFD 635
>gi|18148891|dbj|BAB83481.1| (AB063171) ORF22 [Staphylococcus hominis] Length = 306 Score = 33.6 bits (76), Expect = 0.35 Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Query: 6 KVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQKEWLIKKINESQ 65 K+FI Y+ + + + A L+D+ EV+ D W+ K + ++ + I +S Sbjct: 3 KIFISYAWDEIED--EKVIKLAEMLEDYKEFEVSFDKWDINKGQEVPL--FMERGIQQSD 58 Query: 66 FIIIVCSKGMKYFVEKKNW 84 F++I+CS+ K +K+ Sbjct: 59 FVLIICSERYKVNADKRRG 77
>gi|9625624|ref|NP_039875.1| (NC_001345) nuclear antigen EBNA1 [Human herpesvirus 4] gi|119110|sp|P03211|EBN1_EBV EBNA-1 NUCLEAR PROTEIN gi|73987|pir||QQBE31 nuclear antigen EBNA1 - human herpesvirus 4 gi|1334880|emb|CAA24816.1| (V01555) BKRF1 encodes EBNA-1 protein, latent cycle gene. [Human herpesvirus 4] Length = 641 Score = 29.8 bits (66), Expect = 5.6 Identities = 10/38 (26%), Positives = 16/38 (41%) Query: 16 CQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQ 53 +++ F FLQ EV D +DL + K + Sbjct: 552 GPLRESIVCYFMVFLQTHIFAEVLKDAIKDLVMTKPAP 589
>gi|1942763|pdb|1VHI|A Chain A, Epstein Barr Virus Nuclear Antigen-1 Dna-Binding Domain, Residues 470 - 607 gi|1942764|pdb|1VHI|B Chain B, Epstein Barr Virus Nuclear Antigen-1 Dna-Binding Domain, Residues 470 - 607 Length = 142 Score = 29.8 bits (66), Expect = 6.2 Identities = 10/38 (26%), Positives = 16/38 (41%) Query: 16 CQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQ 53 +++ F FLQ EV D +DL + K + Sbjct: 87 GPLRESIVCYFMVFLQTHIFAEVLKDAIKDLVMTKPAP 124
>gi|710376|gb|AAA67277.1| (U21195) nuclear antigen EBNA-1 [Human herpesvirus 4] Length = 203 Score = 29.4 bits (65), Expect = 6.3 Identities = 10/38 (26%), Positives = 16/38 (41%) Query: 16 CQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQ 53 +++ F FLQ EV D +DL + K + Sbjct: 114 GPLRESIVCYFMVFLQTHIFAEVLKDAIKDLVMTKPAP 151
>gi|710394|gb|AAA67286.1| (U21204) nuclear antigen EBNA-1 [Human herpesvirus 4] Length = 203 Score = 29.4 bits (65), Expect = 6.3 Identities = 10/38 (26%), Positives = 16/38 (41%) Query: 16 CQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQ 53 +++ F FLQ EV D +DL + K + Sbjct: 114 GPLRESIVCYFMVFLQTHIFAEVLKDAIKDLVMTKPAP 151
>gi|15903447|ref|NP_358997.1| (NC_003098) Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|15459056|gb|AAL00208.1| (AE008510) Conserved hypothetical protein [Streptococcus pneumoniae R6] Length = 502 Score = 29.4 bits (65), Expect = 6.6 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 5/50 (10%) Query: 2 RPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKE 51 RP KV I S+ D + F L +C D+W++LK E Sbjct: 407 RPPIKVLII-SNFDH----AISLTFVDMLSYYCNNRFTFDIWDELKTSPE 451
>gi|4139575|pdb|1B3T|A Chain A, Ebna-1 Nuclear ProteinDNA COMPLEX gi|4139576|pdb|1B3T|B Chain B, Ebna-1 Nuclear ProteinDNA COMPLEX Length = 147 Score = 29.4 bits (65), Expect = 7.0 Identities = 10/38 (26%), Positives = 16/38 (41%) Query: 16 CQKHINVIQCFAYFLQDFCGCEVALDLWEDLKICKESQ 53 +++ F FLQ EV D +DL + K + Sbjct: 92 GPLRESIVCYFMVFLQTHIFAEVLKDAIKDLVMTKPAP 129
>gi|16078188|ref|NP_389005.1| (NC_000964) carbamoyl-phosphate transferase-arginine (subunit A) [Bacillus subtilis] gi|543930|sp|P36838|CARX_BACSU Carbamoyl-phosphate synthase, arginine-specific, small chain (Carbamoyl-phosphate synthetase glutamine chain) gi|2126902|pir||I40376 carbamoylphosphate synthetase chain A (carA) - Bacillus subtilis gi|408118|emb|CAA81547.1| (Z26919) carbamoylphosphate synthetase subunit A [Bacillus subtilis] gi|2633460|emb|CAB12964.1| (Z99109) carbamoyl-phosphate transferase-arginine (subunit A) [Bacillus subtilis] gi|2633477|emb|CAB12980.1| (Z99110) carbamoyl-phosphate transferase-arginine (subunit A) [Bacillus subtilis] Length = 353 Score = 29.4 bits (65), Expect = 7.7 Identities = 7/30 (23%), Positives = 13/30 (43%) Query: 2 RPRPKVFICYSSKDCQKHINVIQCFAYFLQ 31 +P+ K + Y + D H + +LQ Sbjct: 71 KPQVKAAVVYEACDHFSHYEAVYSLKEYLQ 100
>gi|417097|sp|P32073|GUAA_DICDI GMP synthase [glutamine-hydrolyzing] (Glutamine amidotransferase) (GMP synthetase) gi|84114|pir||A41164 GMP synthase (glutamine-hydrolyzing) (EC 6.3.5.2) - slime mold (Dictyostelium discoideum) gi|167807|gb|AAA33213.1| (M64282) GMP synthetase [Dictyostelium discoideum] Length = 718 Score = 29.4 bits (65), Expect = 8.0 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 9/56 (16%) Query: 26 FAYFLQDFCGCEV--ALDLWEDLKICKESQKEWLIKKINESQFIIIVCSKGMKYFV 79 F+ FL D CGC LD E I IK I ++ ++++ S G+ V Sbjct: 234 FSNFLIDICGCSANYTLDDREQQAIT-------YIKSIVSNKKVLVLVSGGVDSTV 282
>gi|20830926|ref|XP_132775.1| (XM_132775) hypothetical protein XP_132775 [Mus musculus] Length = 311 Score = 29.0 bits (64), Expect = 9.7 Identities = 15/58 (25%), Positives = 27/58 (45%), Gaps = 4/58 (6%) Query: 2 RPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGC--EVALDLWEDLKICKESQKEWL 57 R RP V + +++ D + ++ A L+ G +V +DLWE + + WL Sbjct: 120 RTRP-VLLLHAA-DSEAQRRLVGALAELLRTALGGGRDVIVDLWEGTHVARIGPLPWL 175
>gi|20071315|gb|AAH26737.1| (BC026737) Unknown (protein for MGC:30952) [Mus musculus] Length = 311 Score = 29.0 bits (64), Expect = 9.9 Identities = 15/58 (25%), Positives = 27/58 (45%), Gaps = 4/58 (6%) Query: 2 RPRPKVFICYSSKDCQKHINVIQCFAYFLQDFCGC--EVALDLWEDLKICKESQKEWL 57 R RP V + +++ D + ++ A L+ G +V +DLWE + + WL Sbjct: 120 RTRP-VLLLHAA-DSEAQRRLVGALAELLRTALGGGRDVIVDLWEGTHVARIGPLPWL 175
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Sep 4, 2002 12:20 AM Number of letters in database: 330,426,180 Number of sequences in database: 1,044,513 Lambda K H 0.318 0.160 0.471 Gapped Lambda K H 0.267 0.0491 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 123,009,448 Number of Sequences: 1044513 Number of extensions: 5667214 Number of successful extensions: 15469 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 27 Number of HSP's that attempted gapping in prelim test: 15388 Number of HSP's gapped (non-prelim): 67 length of query: 141 length of database: 330,426,180 effective HSP length: 117 effective length of query: 24 effective length of database: 208,218,159 effective search space: 4997235816 effective search space used: 4997235816 T: 11 A: 40 X1: 15 ( 6.9 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.0 bits) S2: 64 (29.0 bits)