RID: 1063991456-26023-3186338.BLASTQ3 Query= NP_173030 (117 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,524,159 sequences; 490,690,828 total letters Results of PSI-Blast iteration 7 Skip to the first new sequence
Query= NP_173030 (117 letters)
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,524,159 sequences; 490,690,828 total letters
Legend: - means that the alignment score was below the threshold on the previous iteration - means that the alignment was checked on the previous iteration Hit list size Sequences with E-value BETTER than threshold Related Structures Score E Sequences producing significant alignments: (bits) Value gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thal... 150 6e-36 gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhab... 144 2e-34 gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhab... 144 3e-34 gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhab... 144 3e-34 gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabd... 141 2e-33 gi|17554044|ref|NP_499201.1| CREB-binding protein like family me... 141 3e-33 gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana >... 134 3e-31 gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p... 131 2e-30 gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 130 4e-30 gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p... 128 2e-29 gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubi... 128 3e-29 gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-termi... 127 3e-29 gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] ... 127 3e-29 gi|631119|pir||S39162 transcription coactivator CREB-binding pro... 127 3e-29 gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] 127 3e-29 gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] >... 124 2e-28 gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p... 124 3e-28 gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein >gi|481698|p... 124 3e-28 gi|737920|prf||1923401A protein CBP 124 4e-28 gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [... 124 4e-28 gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-bindin... 123 8e-28 gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] 121 2e-27 gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia califor... 119 8e-27 gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica ... 119 8e-27 gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thal... 116 5e-26 gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 114 3e-25 gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japon... 109 9e-24 gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambi... 108 1e-23 gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly ... 106 9e-23 gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Bin... 106 1e-22 gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melan... 104 2e-22 gi|17552402|ref|NP_497144.1| CREB-binding protein like family me... 103 5e-22 gi|17552400|ref|NP_497145.1| CREB-binding protein like family me... 100 4e-21 gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [... 100 4e-21 gi|17508323|ref|NP_493339.1| CREB-binding protein like family me... 93 9e-19 gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic... 86 9e-17 gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabdi... 86 1e-16 gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabid... 84 6e-16 gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonic... 83 7e-16 gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related ... 83 1e-15 gi|7493813|pir||T18235 transcription activator GAL11 homolog - y... 82 2e-15 gi|28279616|gb|AAH45472.1| Similar to PC2 (positive cofactor 2, ... 80 7e-15 gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis t... 78 3e-14 gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cunicu... 76 1e-13 gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thal... 71 4e-12 gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonic... 51 5e-06 gi|21748618|dbj|BAC03446.1| FLJ00386 protein [Homo sapiens] 50 5e-06 gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arab... 50 6e-06 gi|21312134|ref|NP_056973.2| positive cofactor 2, glutamine/Q-ri... 50 7e-06 gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine-rich-associat... 50 7e-06 gi|27734440|sp|Q96RN5|PCAP_HUMAN Positive cofactor 2 glutamine/Q... 50 9e-06 gi|32451779|gb|AAH54779.1| Pcqap protein [Mus musculus] 49 1e-05 gi|25518480|pir||D86302 hypothetical protein F17F16.9 - Arabidop... 48 2e-05 gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] 46 8e-05 gi|20177999|sp|Q924H2|PCAP_MOUSE Positive cofactor 2 glutamine/Q... 45 2e-04 gi|15809028|ref|NP_291087.1| positive cofactor 2, glutamine/Q-ri... 44 3e-04 gi|18394390|ref|NP_564004.1| expressed protein [Arabidopsis thal... 41 0.004 gi|28374176|gb|AAH46263.1| Similar to PC2 (positive cofactor 2, ... 41 0.004 Sequences with E-value WORSE than threshold gi|28871928|ref|NP_794547.1| lipoprotein, putative [Pseudomonas ... 38 0.025 gi|15230072|ref|NP_189057.1| expressed protein [Arabidopsis thal... 38 0.027 gi|23470798|ref|ZP_00126130.1| hypothetical protein [Pseudomonas... 38 0.028 gi|21956190|gb|AAM83255.1|AF378334_1 ARC105 [Xenopus laevis] 38 0.034 gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thal... 37 0.074 gi|19920468|ref|NP_608528.1| CG4184-PA [Drosophila melanogaster]... 36 0.13 gi|20891927|ref|XP_147188.1| positive cofactor 2, multiprotein c... 35 0.20 gi|7506661|pir||T16726 hypothetical protein R12B2.5 - Caenorhabd... 35 0.21 gi|34499307|ref|NP_903522.1| hypothetical protein CV3852 [Chromo... 33 0.85 Alignments
Legend:
- means that the alignment score was below the threshold on the previous iteration
- means that the alignment was checked on the previous iteration
gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thal... 150 6e-36 gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhab... 144 2e-34 gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhab... 144 3e-34 gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhab... 144 3e-34 gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabd... 141 2e-33 gi|17554044|ref|NP_499201.1| CREB-binding protein like family me... 141 3e-33 gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana >... 134 3e-31 gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p... 131 2e-30 gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] 130 4e-30 gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p... 128 2e-29 gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubi... 128 3e-29 gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-termi... 127 3e-29 gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] ... 127 3e-29 gi|631119|pir||S39162 transcription coactivator CREB-binding pro... 127 3e-29 gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] 127 3e-29 gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] >... 124 2e-28 gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p... 124 3e-28 gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein >gi|481698|p... 124 3e-28 gi|737920|prf||1923401A protein CBP 124 4e-28 gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [... 124 4e-28 gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-bindin... 123 8e-28 gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] 121 2e-27 gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia califor... 119 8e-27 gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica ... 119 8e-27 gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thal... 116 5e-26 gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] 114 3e-25 gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japon... 109 9e-24 gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambi... 108 1e-23 gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly ... 106 9e-23 gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Bin... 106 1e-22 gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melan... 104 2e-22 gi|17552402|ref|NP_497144.1| CREB-binding protein like family me... 103 5e-22 gi|17552400|ref|NP_497145.1| CREB-binding protein like family me... 100 4e-21 gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [... 100 4e-21 gi|17508323|ref|NP_493339.1| CREB-binding protein like family me... 93 9e-19 gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic... 86 9e-17 gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabdi... 86 1e-16 gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabid... 84 6e-16 gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonic... 83 7e-16 gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related ... 83 1e-15 gi|7493813|pir||T18235 transcription activator GAL11 homolog - y... 82 2e-15 gi|28279616|gb|AAH45472.1| Similar to PC2 (positive cofactor 2, ... 80 7e-15 gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis t... 78 3e-14 gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cunicu... 76 1e-13 gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thal... 71 4e-12 gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonic... 51 5e-06 gi|21748618|dbj|BAC03446.1| FLJ00386 protein [Homo sapiens] 50 5e-06 gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arab... 50 6e-06 gi|21312134|ref|NP_056973.2| positive cofactor 2, glutamine/Q-ri... 50 7e-06 gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine-rich-associat... 50 7e-06 gi|27734440|sp|Q96RN5|PCAP_HUMAN Positive cofactor 2 glutamine/Q... 50 9e-06 gi|32451779|gb|AAH54779.1| Pcqap protein [Mus musculus] 49 1e-05 gi|25518480|pir||D86302 hypothetical protein F17F16.9 - Arabidop... 48 2e-05 gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] 46 8e-05 gi|20177999|sp|Q924H2|PCAP_MOUSE Positive cofactor 2 glutamine/Q... 45 2e-04 gi|15809028|ref|NP_291087.1| positive cofactor 2, glutamine/Q-ri... 44 3e-04 gi|18394390|ref|NP_564004.1| expressed protein [Arabidopsis thal... 41 0.004 gi|28374176|gb|AAH46263.1| Similar to PC2 (positive cofactor 2, ... 41 0.004
gi|28871928|ref|NP_794547.1| lipoprotein, putative [Pseudomonas ... 38 0.025 gi|15230072|ref|NP_189057.1| expressed protein [Arabidopsis thal... 38 0.027 gi|23470798|ref|ZP_00126130.1| hypothetical protein [Pseudomonas... 38 0.028 gi|21956190|gb|AAM83255.1|AF378334_1 ARC105 [Xenopus laevis] 38 0.034 gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thal... 37 0.074 gi|19920468|ref|NP_608528.1| CG4184-PA [Drosophila melanogaster]... 36 0.13 gi|20891927|ref|XP_147188.1| positive cofactor 2, multiprotein c... 35 0.20 gi|7506661|pir||T16726 hypothetical protein R12B2.5 - Caenorhabd... 35 0.21 gi|34499307|ref|NP_903522.1| hypothetical protein CV3852 [Chromo... 33 0.85
>gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thaliana] Length = 1335 Score = 150 bits (379), Expect = 6e-36 Identities = 117/117 (100%), Positives = 117/117 (100%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT Sbjct: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117
>gi|2133462|pir||S60123 hypothetical protein R10E11.1 - Caenorhabditis elegans Length = 2027 Score = 144 bits (365), Expect = 2e-34 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 8/120 (6%) Query: 4 NNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIA 61 N P+LP + T +W Q+ D R +V K+++ + + +L A Sbjct: 580 NGEIPNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYA 639 Query: 62 ARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS------AAIPAANNGTSIDSI 115 + E+++F A ++ +Y ++ K+ ++ + Q S A A ++ + Sbjct: 640 RKVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQ 699
>gi|17552710|ref|NP_499160.1| CBP/p300 homolog (cbp-1) [Caenorhabditis elegans] gi|20455476|sp|P34545|CBP1_CAEEL Protein cbp-1 gi|25299632|pir||G88564 protein R10E11.1 [imported] - Caenorhabditis elegans gi|17645979|emb|CAD18875.1| C. elegans CBP-1 protein (corresponding sequence R10E11.1b) [Caenorhabditis elegans] Length = 2056 Score = 144 bits (365), Expect = 3e-34 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 8/120 (6%) Query: 4 NNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIA 61 N P+LP + T +W Q+ D R +V K+++ + + +L A Sbjct: 580 NGEIPNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYA 639 Query: 62 ARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS------AAIPAANNGTSIDSI 115 + E+++F A ++ +Y ++ K+ ++ + Q S A A ++ + Sbjct: 640 RKVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQ 699
>gi|17552708|ref|NP_499161.1| CBP/p300 homolog (cbp-1) [Caenorhabditis elegans] gi|14530537|emb|CAA82353.2| C. elegans CBP-1 protein (corresponding sequence R10E11.1a) [Caenorhabditis elegans] Length = 2045 Score = 144 bits (365), Expect = 3e-34 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 8/120 (6%) Query: 4 NNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIA 61 N P+LP + T +W Q+ D R +V K+++ + + +L A Sbjct: 569 NGEIPNLPPPDMPDCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYA 628 Query: 62 ARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS------AAIPAANNGTSIDSI 115 + E+++F A ++ +Y ++ K+ ++ + Q S A A ++ + Sbjct: 629 RKVEKEMFESANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQ 688
>gi|482238|pir||S41033 hypothetical protein K03H1.10 - Caenorhabditis elegans (fragment) Length = 316 Score = 141 bits (357), Expect = 2e-33 Identities = 22/110 (20%), Positives = 47/110 (42%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAA 62 N +LP + T +W Q+ D R IV K+++ + + +L A Sbjct: 144 TNGNISNLPPPNVPVRTKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYAR 203 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 + E+++F A+++ +Y ++ K+ ++ + Q S AA + Sbjct: 204 KVEKEVFETAIDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDE 253
>gi|17554044|ref|NP_499201.1| CREB-binding protein like family member (36.7 kD) (3L15) [Caenorhabditis elegans] gi|25395947|pir||D88569 protein K03H1.10 [imported] - Caenorhabditis elegans gi|3877003|emb|CAA82940.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans] gi|3878179|emb|CAA82665.1| Hypothetical protein K03H1.10 [Caenorhabditis elegans] Length = 322 Score = 141 bits (356), Expect = 3e-33 Identities = 22/110 (20%), Positives = 47/110 (42%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAA 62 N +LP + T +W Q+ D R IV K+++ + + +L A Sbjct: 150 TNGNISNLPPPNVPVRTKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYAR 209 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 + E+++F A+++ +Y ++ K+ ++ + Q S AA + Sbjct: 210 KVEKEVFETAIDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDE 259
>gi|25511635|pir||B86292 F7H2.12 protein - Arabidopsis thaliana gi|8927657|gb|AAF82148.1|AC034256_12 EST gb|N38213 comes from this gene. [Arabidopsis thaliana] Length = 1366 Score = 134 bits (339), Expect = 3e-31 Identities = 117/148 (79%), Positives = 117/148 (79%), Gaps = 31/148 (20%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI Sbjct: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 Query: 61 AARFEEKIFSGALNQ-------------------------------TDYLRKISMKMLTM 89 AARFEEKIFSGALNQ TDYLRKISMKMLTM Sbjct: 61 AARFEEKIFSGALNQRFVRQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTM 120 Query: 90 ETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ETKSQNAAGSSAAIPAANNGTSIDSIPT Sbjct: 121 ETKSQNAAGSSAAIPAANNGTSIDSIPT 148
>gi|27666550|ref|XP_235770.1| similar to E1A-associated protein p300 [Rattus norvegicus] Length = 1605 Score = 131 bits (332), Expect = 2e-30 Identities = 19/129 (14%), Positives = 46/129 (35%), Gaps = 18/129 (13%) Query: 1 MDNNNWR------PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M+ N P+ W + D R +V+K+++ + P P + Sbjct: 173 MNENASVASLGPLPTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 229 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPA 105 + L A + E ++ A N+ +Y ++ K+ ++ + + + +P+ Sbjct: 230 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPS 289 Query: 106 ANNGTSIDS 114 A + Sbjct: 290 APGMVPVPM 298
>gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata] Length = 1405 Score = 130 bits (329), Expect = 4e-30 Identities = 75/117 (64%), Positives = 95/117 (81%), Gaps = 3/117 (2%) Query: 1 MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 MD NNWRP+ P GE +DTGDWRTQL PDSRQ+IVNKIM+TLK+HLPFSG +G+NEL++I Sbjct: 16 MDTNNWRPTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKI 75 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI-DSIP 116 A RFEEKI++ A +Q+DYLRKIS+KML+ME+KSQNA +S + + N G+S P Sbjct: 76 AGRFEEKIYTAASSQSDYLRKISLKMLSMESKSQNAMPNS--LQSNNPGSSNRPPDP 130
>gi|27663074|ref|XP_235502.1| similar to E1A-associated protein p300 [Rattus norvegicus] Length = 2156 Score = 128 bits (323), Expect = 2e-29 Identities = 19/129 (14%), Positives = 46/129 (35%), Gaps = 18/129 (13%) Query: 1 MDNNNWR------PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M+ N P+ W + D R +V+K+++ + P P + Sbjct: 173 MNENASVASLGPLPTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 229 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPA 105 + L A + E ++ A N+ +Y ++ K+ ++ + + + +P+ Sbjct: 230 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPS 289 Query: 106 ANNGTSIDS 114 A + Sbjct: 290 APGMVPVPM 298
>gi|27881767|gb|AAH44677.1| Similar to CREB binding protein (Rubinstein-Taybi syndrome) [Xenopus laevis] Length = 1047 Score = 128 bits (322), Expect = 3e-29 Identities = 18/124 (14%), Positives = 44/124 (35%), Gaps = 12/124 (9%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----L 57 N+ P+ W + D R +V+K+++ + P P + + L Sbjct: 562 NHGTMPTAAPPSSTGVRKAWHEHVTQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENL 618 Query: 58 RRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIP---AANNGTSIDS 114 A + E ++ A ++ +Y ++ K+ ++ + + S ++ Sbjct: 619 VAYARKVEGDMYESANSRDEYYHFLAEKIYKIQKELEEKRRSRLQKQGIMSSQAPLQAPG 678 Query: 115 -IPT 117 PT Sbjct: 679 AQPT 682
>gi|547239|gb|AAB31182.1| p300=transcription coactivator {N-terminal} [mice, Peptide Partial, 688 aa] Length = 688 Score = 127 bits (321), Expect = 3e-29 Identities = 17/116 (14%), Positives = 42/116 (36%), Gaps = 12/116 (10%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAA 62 P+ W + D R +V+K+++ + P P + + L A Sbjct: 558 PTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAR 614 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPAANNGTSIDS 114 + E ++ A N+ +Y ++ K+ ++ + + + +P A + Sbjct: 615 KVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAPGMGPVPM 670
>gi|4758056|ref|NP_004371.1| CREB binding protein [Homo sapiens] gi|3023440|sp|Q92793|CBP_HUMAN CREB-binding protein gi|2443859|gb|AAC51770.1| CREB-binding protein Length = 2442 Score = 127 bits (321), Expect = 3e-29 Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 15/122 (12%) Query: 6 WRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 P+ W + D R +V+K+++ + P P + + L Sbjct: 576 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 632 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSID 113 A + E ++ A ++ +Y ++ K+ ++ + + S PA + Sbjct: 633 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQP 692 Query: 114 SI 115 + Sbjct: 693 PV 694
>gi|631119|pir||S39162 transcription coactivator CREB-binding protein - human Length = 2440 Score = 127 bits (321), Expect = 3e-29 Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 15/122 (12%) Query: 6 WRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 P+ W + D R +V+K+++ + P P + + L Sbjct: 576 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 632 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSID 113 A + E ++ A ++ +Y ++ K+ ++ + + S PA + Sbjct: 633 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQP 692 Query: 114 SI 115 + Sbjct: 693 PV 694
>gi|4321116|gb|AAC51331.2| CREB-binding protein [Homo sapiens] Length = 2442 Score = 127 bits (321), Expect = 3e-29 Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 15/122 (12%) Query: 6 WRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 P+ W + D R +V+K+++ + P P + + L Sbjct: 576 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 632 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSID 113 A + E ++ A ++ +Y ++ K+ ++ + + S PA + Sbjct: 633 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQP 692 Query: 114 SI 115 + Sbjct: 693 PV 694
>gi|19547885|gb|AAL87531.1| CREB-binding protein [Mus musculus] gi|19547887|gb|AAL87532.1| CREB-binding protein [Mus musculus] Length = 2429 Score = 124 bits (313), Expect = 2e-28 Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 15/122 (12%) Query: 6 WRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 P+ W + D R +V+K+++ + P P + + L Sbjct: 569 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 625 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSID 113 A + E ++ A ++ +Y ++ K+ ++ + + S PA + Sbjct: 626 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPASGAQP 685 Query: 114 SI 115 + Sbjct: 686 PV 687
>gi|28486616|ref|XP_283295.1| similar to E1A-associated protein p300 [Mus musculus] gi|29244384|ref|NP_808489.1| hypothetical protein A730011L11 [Mus musculus] gi|26335221|dbj|BAC31311.1| unnamed protein product [Mus musculus] Length = 714 Score = 124 bits (313), Expect = 3e-28 Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 18/129 (13%) Query: 1 MDNNNWR------PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M N P+ W + D R +V+K+++ + P P + Sbjct: 545 MSENAGVASLGPLPTAAQPSSTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 601 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPA 105 + L A + E ++ A N+ +Y ++ K+ ++ + + + +P Sbjct: 602 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPN 661 Query: 106 ANNGTSIDS 114 A + Sbjct: 662 APGMGPVPM 670
>gi|1345703|sp|P45481|CBP_MOUSE CREB-binding protein gi|481698|pir||S39161 CREB-binding protein - mouse gi|435855|gb|AAB28651.1| CREB-binding protein; CBP [Mus sp.] Length = 2441 Score = 124 bits (313), Expect = 3e-28 Identities = 16/122 (13%), Positives = 42/122 (34%), Gaps = 15/122 (12%) Query: 6 WRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 P+ W + D R +V+K+++ + P P + + L Sbjct: 575 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 631 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSID 113 A + E ++ A ++ +Y ++ K+ ++ + + + PA + Sbjct: 632 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRTRLHKQGILGNQPALPASGAQP 691 Query: 114 SI 115 + Sbjct: 692 PV 693
>gi|737920|prf||1923401A protein CBP Length = 2441 Score = 124 bits (312), Expect = 4e-28 Identities = 16/122 (13%), Positives = 43/122 (35%), Gaps = 15/122 (12%) Query: 6 WRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 P+ W ++ D R +V+K+++ + P P + + L Sbjct: 575 TIPTAAPPSSTGVRKGWHERVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 631 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSID 113 A + E ++ A ++ +Y ++ K+ ++ + + + PA + Sbjct: 632 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRTRLHKQGILGNQPALPASGAQP 691 Query: 114 SI 115 + Sbjct: 692 PV 693
>gi|31753089|gb|AAH53889.1| Unknown (protein for IMAGE:6151364) [Homo sapiens] Length = 1553 Score = 124 bits (312), Expect = 4e-28 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 18/131 (13%) Query: 1 MDNNNW------RPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M N P+ W + D R +V+K+++ + P P + Sbjct: 544 MSENASVPSLGPMPTAAQPSTTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 600 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPA 105 + L A + E ++ A N+ +Y ++ K+ ++ + + + +P Sbjct: 601 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPN 660 Query: 106 ANNGTSIDSIP 116 A + P Sbjct: 661 AAGMVPVSMNP 671
>gi|4557557|ref|NP_001420.1| E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens] gi|3024341|sp|Q09472|P300_HUMAN E1A-associated protein p300 gi|627657|pir||A54277 transcription adaptor protein p300 - human gi|495301|gb|AAA18639.1| p300 protein Length = 2414 Score = 123 bits (309), Expect = 8e-28 Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 18/131 (13%) Query: 1 MDNNNW------RPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGI 54 M N P+ W + D R +V+K+++ + P P + Sbjct: 544 MSENASVPSLGPMPTAAQPSTTGIRKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAAL 600 Query: 55 NE-----LRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS----AAIPA 105 + L A + E ++ A N+ +Y ++ K+ ++ + + + +P Sbjct: 601 KDRRMENLVAYARKVEGDMYESANNRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPN 660 Query: 106 ANNGTSIDSIP 116 A + P Sbjct: 661 AAGMVPVSMNP 671
>gi|2996629|gb|AAC08447.1| CBP [Homo sapiens] Length = 555 Score = 121 bits (306), Expect = 2e-27 Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 15/122 (12%) Query: 6 WRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRI 60 P+ W + D R +V+K+++ + P P + + L Sbjct: 310 TIPTAAPPSSTGVRKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAY 366 Query: 61 AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSS-------AAIPAANNGTSID 113 A + E ++ A ++ +Y ++ K+ ++ + + S PA + Sbjct: 367 AKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQP 426 Query: 114 SI 115 + Sbjct: 427 PV 428
>gi|21307831|gb|AAL54859.1| CREB-binding protein [Aplysia californica] Length = 2245 Score = 119 bits (300), Expect = 8e-27 Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 2/113 (1%) Query: 5 NWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLP--FSGPEGINELRRIAA 62 P + P DW Q+ D R +V+K+++ + + L A Sbjct: 488 GNAPDIVKSIPVSSRKDWHAQVTQDLRNHLVHKLVQAIFPTPDQATLRDSRMKNLVAYAR 547 Query: 63 RFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSI 115 + E ++ A N+ Y ++ K+ ++ + + + A N Sbjct: 548 KVEGDMYESANNRGQYYHLLAEKIYKIQKELEEKRIQRMKVQNAPNAQVPGMQ 600
>gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-group)] Length = 1359 Score = 119 bits (300), Expect = 8e-27 Identities = 64/120 (53%), Positives = 83/120 (69%), Gaps = 12/120 (10%) Query: 5 NWRPSL-----------PN-GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPE 52 NWRP+ PN PA+ GDWR+QL ++R +IVNKIM+TLKKHLP S PE Sbjct: 8 NWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPE 67 Query: 53 GINELRRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSI 112 G+NEL++IA RFEEKI++ A +Q+DYLRKIS+KML+METK+Q G++ I N S Sbjct: 68 GLNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQNPGNAQVIQNQNPPGSE 127
>gi|22329593|ref|NP_173031.2| expressed protein [Arabidopsis thaliana] gi|25513497|pir||C86292 F7H2.13 protein - Arabidopsis thaliana gi|8927658|gb|AAF82149.1|AC034256_13 ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene. [Arabidopsis thaliana] gi|12083256|gb|AAG48787.1|AF332424_1 unknown protein [Arabidopsis thaliana] Length = 179 Score = 116 bits (293), Expect = 5e-26 Identities = 64/101 (63%), Positives = 72/101 (71%) Query: 16 AMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQ 75 TGDWRTQ P SR +IVNKIMET K LPF PEG NELR+IA RFEEK+F+ A NQ Sbjct: 1 MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60 Query: 76 TDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIP 116 T+YLR+I MKML METKSQNAAGSS+A S+P Sbjct: 61 TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVP 101
Score = 84.2 bits (208), Expect = 4e-16 Identities = 53/82 (64%), Positives = 65/82 (79%) Query: 8 PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEK 67 PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+EL RIA EE Sbjct: 98 PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEEL 157 Query: 68 IFSGALNQTDYLRKISMKMLTM 89 IF+ A+NQ DYL KIS+KM TM Sbjct: 158 IFNSAINQEDYLGKISLKMRTM 179
>gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata] Length = 3148 Score = 114 bits (287), Expect = 3e-25 Identities = 62/93 (66%), Positives = 77/93 (82%) Query: 9 SLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKI 68 S G +D DWR L DSRQ+IVNKIM+TLK+HLPFSGPEG+NEL+RIA RFEEKI Sbjct: 4 SRQKGVAMLDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKI 63 Query: 69 FSGALNQTDYLRKISMKMLTMETKSQNAAGSSA 101 F+ A +Q+DYLRKIS+KML+ME++SQNA+GS+ Sbjct: 64 FTSATSQSDYLRKISLKMLSMESRSQNASGSNE 96
>gi|32489490|emb|CAE03805.1| OSJNBa0027H09.5 [Oryza sativa (japonica cultivar-group)] Length = 1392 Score = 109 bits (274), Expect = 9e-24 Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 1/102 (0%) Query: 12 NGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSG 71 ++ W R+ I+N +++ E++ A R E+ + Sbjct: 9 PASSSVSAAHWMATEDLGLRRNIINNMVKKFMTITNSQQDHHYREIQNYAIRCEQDALNK 68 Query: 72 ALNQTDYLRKISMKMLTMETK-SQNAAGSSAAIPAANNGTSI 112 N+ DYLR I+ +++ ME K ++ + + P+ +S Sbjct: 69 TTNKEDYLRCIAQRIMNMEMKVRRSQSLQAGTTPSTQRPSSQ 110
>gi|31204369|ref|XP_311133.1| ENSANGP00000004748 [Anopheles gambiae] gi|30178093|gb|EAA06516.2| ENSANGP00000004748 [Anopheles gambiae str. PEST] Length = 2572 Score = 108 bits (272), Expect = 1e-23 Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 9/105 (8%) Query: 3 NNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----L 57 PS+ P T DW + PD R +V+K+++ + P P + + L Sbjct: 727 TGGTNPSMV-AVPVQGTKDWHHSVTPDLRNHLVHKLVQAI---FPSPDPSAMFDKRMYNL 782 Query: 58 RRIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAA 102 A + E ++ A ++++Y ++ K+ ++ + + Sbjct: 783 VAYAKKVEGDMYEMANSRSEYYHLLAEKIYKIQKELEEKRQKRKE 827
>gi|7511830|pir||T13828 CREB-binding protein homolog - fruit fly (Drosophila melanogaster) gi|1916930|gb|AAB53050.1| CREB-binding protein homolog [Drosophila melanogaster] Length = 3190 Score = 106 bits (265), Expect = 9e-23 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Query: 13 GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKH--LPFSGPEGINELRRIAARFEEKIFS 70 G P + DWR + D R +V+K+++ + + ++ L A + E+ ++ Sbjct: 934 GPPGDNEKDWRESVTADLRNHLVHKLVQAIFPTSDPTTMQDKRMHNLVSYAEKVEKDMYE 993 Query: 71 GALNQTDYLRKISMKMLTMETKSQNAAGSSAA 102 A ++++Y ++ K+ ++ + + Sbjct: 994 MAKSRSEYYHLLAEKIYKIQKELEEKRLKRKE 1025
>gi|4139873|pdb|1KDX|A Chain A, Kix Domain Of Mouse Cbp (Creb Binding Protein) In Complex With Phosphorylated Kinase Inducible Domain (Pkid) Of Rat Creb (Cyclic Amp Response Element Binding Protein), Nmr 17 Structures Length = 81 Score = 106 bits (265), Expect = 1e-22 Identities = 13/82 (15%), Positives = 35/82 (42%), Gaps = 8/82 (9%) Query: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINE-----LRRIAARFEEKIFSGAL 73 W + D R +V+K+++ + P P + + L A + E ++ A Sbjct: 3 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 59 Query: 74 NQTDYLRKISMKMLTMETKSQN 95 ++ +Y ++ K+ ++ + + Sbjct: 60 SRDEYYHLLAEKIYKIQKELEE 81
>gi|24640865|ref|NP_524642.2| nejire CG15319-PB [Drosophila melanogaster] gi|22833041|gb|AAF46516.2| CG15319-PB [Drosophila melanogaster] Length = 3276 Score = 104 bits (262), Expect = 2e-22 Identities = 15/92 (16%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Query: 13 GEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKH--LPFSGPEGINELRRIAARFEEKIFS 70 G P + DWR + D R +V+K+++ + + ++ L A + E+ ++ Sbjct: 934 GPPGDNEKDWRESVTADLRNHLVHKLVQAIFPTSDPTTMQDKRMHNLVSYAEKVEKDMYE 993 Query: 71 GALNQTDYLRKISMKMLTMETKSQNAAGSSAA 102 A ++++Y ++ K+ ++ + + Sbjct: 994 MAKSRSEYYHLLAEKIYKIQKELEEKRLKRKE 1025
>gi|17552402|ref|NP_497144.1| CREB-binding protein like family member (3A733) [Caenorhabditis elegans] gi|7496697|pir||T33579 hypothetical protein C29F9.6 - Caenorhabditis elegans gi|3790688|gb|AAC68748.1| Hypothetical protein C29F9.6 [Caenorhabditis elegans] Length = 228 Score = 103 bits (259), Expect = 5e-22 Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 2/91 (2%) Query: 11 PNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFS 70 P P + W +++P R+ ++ +I + + H P I +++ A E +IF Sbjct: 109 PEPRPPGTSQPWHSEVPKTDREAVIERISKHIMLHPQRFEP--IWKIKEDARAAELQIFE 166 Query: 71 GALNQTDYLRKISMKMLTMETKSQNAAGSSA 101 A ++ +Y R + + + K+ G A Sbjct: 167 AAGSRDEYYRMVEERAPREQDKAPEGPGQEA 197
>gi|17552400|ref|NP_497145.1| CREB-binding protein like family member (3A735) [Caenorhabditis elegans] gi|7496696|pir||T33580 hypothetical protein C29F9.5 - Caenorhabditis elegans gi|3790687|gb|AAC68747.1| Hypothetical protein C29F9.5 [Caenorhabditis elegans] Length = 226 Score = 100 bits (251), Expect = 4e-21 Identities = 11/99 (11%), Positives = 29/99 (29%), Gaps = 2/99 (2%) Query: 9 SLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKK--HLPFSGPEGINELRRIAARFEE 66 + + W ++P R +++ KI + + ++ + + E Sbjct: 105 TPAEPKKPEHDQIWHLEVPKTYRSELIEKIYKGIMSNVKPGTLSEAQMDTWKEYSRSAEL 164 Query: 67 KIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPA 105 +IF A Y K+ + + + Sbjct: 165 QIFDTAQKLEAYYHMAREKVCRYQEGFPRRQKTEEKDES 203
>gi|17567279|ref|NP_509376.1| CREB-binding protein like (XI780) [Caenorhabditis elegans] gi|7499689|pir||T16139 hypothetical protein F22F1.3 - Caenorhabditis elegans gi|1118044|gb|AAA83283.1| Hypothetical protein F22F1.3 [Caenorhabditis elegans] Length = 295 Score = 100 bits (251), Expect = 4e-21 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 3/92 (3%) Query: 24 TQLPPDSRQKIVNKIMETLKKHLPF--SGPEGINELRRIAARFEEKIFSGALNQTDYLRK 81 + L RQ ++ KI+ + EL+ A E+K F + +Y + Sbjct: 64 STLERGLRQYMITKIVREAVPRPNSDAKNDARMIELKEYATFMEKKSFEKVQTKDEYYAE 123 Query: 82 ISMKMLTMETKSQNAAGSSAAIPAAN-NGTSI 112 ++ +L+M+ Q+ S P +N + Sbjct: 124 LARIILSMQKHLQSRPKGSYEDPYSNIPPSHE 155
>gi|17508323|ref|NP_493339.1| CREB-binding protein like family member (80.3 kD) (1N890) [Caenorhabditis elegans] gi|7505888|pir||T23651 hypothetical protein M01E5.6 - Caenorhabditis elegans gi|3878635|emb|CAB07643.1| Hypothetical protein M01E5.6 [Caenorhabditis elegans] gi|3879438|emb|CAB03290.1| Hypothetical protein M01E5.6 [Caenorhabditis elegans] Length = 702 Score = 93.0 bits (231), Expect = 9e-19 Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 7/100 (7%) Query: 15 PAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPF---SGPEGINELRRIAARFEEKIFSG 71 + +W + D R +V K+++ + E +L A + E +I Sbjct: 595 GTNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEA 651 Query: 72 ALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTS 111 + ++ +Y R + + + + K+ A T Sbjct: 652 SNDRDEYYRLMQLTVDQILKKTL-KKDQRATEHNHQQPTQ 690
>gi|17559186|ref|NP_507512.1| predicted CDS, putative cytoplasmic protein (5S403) [Caenorhabditis elegans] gi|7498278|pir||T20398 hypothetical protein E01B7.2 - Caenorhabditis elegans gi|5824421|emb|CAB54214.1| Hypothetical protein E01B7.2 [Caenorhabditis elegans] Length = 230 Score = 86.1 bits (213), Expect = 9e-17 Identities = 19/70 (27%), Positives = 30/70 (42%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DW+ + + R K V KI+ T P I+EL + E +S A N+ Y Sbjct: 56 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 115 Query: 81 KISMKMLTME 90 I + +M+ Sbjct: 116 GIESMIQSMQ 125
>gi|25396635|pir||E89403 protein C06H5.4 [imported] - Caenorhabditis elegans Length = 337 Score = 86.1 bits (213), Expect = 1e-16 Identities = 19/70 (27%), Positives = 30/70 (42%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DW+ + + R K V KI+ T P I+EL + E +S A N+ Y Sbjct: 177 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 236 Query: 81 KISMKMLTME 90 I + +M+ Sbjct: 237 GIESMIQSMQ 246
>gi|7487910|pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thaliana gi|3152587|gb|AAC17068.1| Similar to CREB-binding protein homolog gb|U88570 from D. melanogaster and contains similarity to callus-associated protein gb|U01961 from Nicotiana tabacum. EST gb|W43427 comes from this gene. [Arabidopsis thaliana] Length = 1516 Score = 83.8 bits (207), Expect = 6e-16 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 RQ + +I L++ P E + +A R EE +F A + DY+ + ++ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ++ Q ++ AN+ + IPT Sbjct: 111 ASLIKGRQ---LNNYNQRHANSSSVGTMIPT 138
>gi|27260984|dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)] Length = 414 Score = 83.4 bits (206), Expect = 7e-16 Identities = 24/64 (37%), Positives = 42/64 (65%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DWRT+L D R ++ I+ +L+ L + + +L+++AAR EE+I+ A++ DYLR Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71 Query: 81 KISM 84 +IS+ Sbjct: 72 RISL 75
>gi|18412221|ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] gi|12597461|gb|AAG60059.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] Length = 1654 Score = 82.6 bits (204), Expect = 1e-15 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 RQ + +I L++ P E + +A R EE +F A + DY+ + ++ Sbjct: 51 LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ++ Q ++ AN+ + IPT Sbjct: 111 ASLIKGRQ---LNNYNQRHANSSSVGTMIPT 138
>gi|7493813|pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) gi|3859719|emb|CAA21993.1| possible regulatory protein [Candida albicans] Length = 1145 Score = 82.2 bits (203), Expect = 2e-15 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 2/97 (2%) Query: 10 LPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPE-GINELRRIAARFEEKI 68 G + WR + RQK+V I+ TL + L S P + L ++A FE+ + Sbjct: 11 QQMGGGSNPNASWRAMYSGEERQKVVQIIINTLTE-LHGSNPNFNVQRLSKMAQDFEKLV 69 Query: 69 FSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPA 105 + + ++ DYLR I MK+ + + Q A + Sbjct: 70 YERSASKEDYLRAIKMKVHQLRVQKQQIAANQGGQIN 106
>gi|28279616|gb|AAH45472.1| Similar to PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein [Danio rerio] Length = 809 Score = 79.9 bits (197), Expect = 7e-15 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 14/102 (13%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + DWR+ P RQK+V +I E ++K + + E +F+ A Sbjct: 2 DVPGPDSDWRS---PAFRQKVVAQIEEAMRKAGTGHT--------KSSTEMESHVFTKAK 50 Query: 74 NQTDYLRKISMKML---TMETKSQNAAGSSAAIPAANNGTSI 112 + +YL ++ ++ + K+Q A+ G Sbjct: 51 TREEYLSMVARLIIHFRDIHKKAQGGPDPINALQNLPGGVPG 92
>gi|15226772|ref|NP_178842.1| hypothetical protein [Arabidopsis thaliana] gi|25411357|pir||E84491 hypothetical protein At2g10440 [imported] - Arabidopsis thaliana gi|4733973|gb|AAD28655.1| hypothetical protein [Arabidopsis thaliana] Length = 935 Score = 77.6 bits (191), Expect = 3e-14 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 5/76 (6%) Query: 3 NNNWRPSLPNG--EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60 N NW+P+ G + A + DWR+Q P+ RQK+++KI+E K+ IN+ I Sbjct: 4 NTNWKPNEQGGNRDAANNRIDWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---I 60 Query: 61 AARFEEKIFSGALNQT 76 A++FEE +S A ++T Sbjct: 61 ASKFEENFYSIATDKT 76
>gi|19074594|ref|NP_586100.1| MADS domain [Encephalitozoon cuniculi] gi|19069236|emb|CAD25704.1| MADS domain [Encephalitozoon cuniculi] Length = 776 Score = 76.1 bits (187), Expect = 1e-13 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 5/85 (5%) Query: 25 QLPPDSRQKIVNKIMETLKK--HLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLRKI 82 L + R++++ K+ LK+ P P I E A R E++I+ + ++ +YLR + Sbjct: 1 MLSQEERKQMILKLFVALKESNIFPGYTPVQIKEA---AIRAEQRIYEESGSKEEYLRGM 57 Query: 83 SMKMLTMETKSQNAAGSSAAIPAAN 107 + +E N + + + Sbjct: 58 DERFQRIERVVSNRSRADGRGKSTQ 82
>gi|15219327|ref|NP_173115.1| expressed protein [Arabidopsis thaliana] Length = 1706 Score = 70.7 bits (173), Expect = 4e-12 Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLRK--ISMKM 86 RQ + + L++ P + +A R EE +F A+ + DY+ + + ++ Sbjct: 73 LRQYMQTLVFNMLQQRQPSPADAASKAKYMDVARRLEEGLFKMAVTKEDYMNRSTLESRI 132 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 ++ Q ++ AN+ + IPT Sbjct: 133 TSLIKGRQ---INNYNQRHANSSSVGTMIPT 160
>gi|27260985|dbj|BAC45102.1| OJ1705_C03.24 [Oryza sativa (japonica cultivar-group)] Length = 87 Score = 50.6 bits (121), Expect = 5e-06 Identities = 11/41 (26%), Positives = 24/41 (58%) Query: 35 VNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQ 75 + + M L+ L + + +L+++AAR EE+I+ A++ Sbjct: 35 IGQTMPILQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDF 75
>gi|21748618|dbj|BAC03446.1| FLJ00386 protein [Homo sapiens] Length = 811 Score = 50.3 bits (120), Expect = 5e-06 Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 16/98 (16%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + + DWR+ RQK+V++I + ++K + + E +F A Sbjct: 25 DVSGQETDWRST---AFRQKLVSQIEDAMRKAGVAHS--------KSSKDMESHVFLKAK 73 Query: 74 NQTDYLRKISMKML---TMETKSQNA--AGSSAAIPAA 106 + +YL ++ ++ + K A + A+ + Sbjct: 74 TRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSL 111
>gi|15230656|ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thaliana] gi|15795129|dbj|BAB02507.1| CREB-binding protein-like [Arabidopsis thaliana] Length = 1670 Score = 50.3 bits (120), Expect = 6e-06 Identities = 16/97 (16%), Positives = 41/97 (42%), Gaps = 9/97 (9%) Query: 24 TQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYL--R 80 +Q RQ+++N+ L++ P + +L +A R E ++ A ++ DYL R Sbjct: 37 SQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFR 96 Query: 81 KISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 +++ + + + ++ + + + T Sbjct: 97 SFDVRVESTLKQLLSQRRAN------PSSSVSTMVQT 127
>gi|21312134|ref|NP_056973.2| positive cofactor 2, glutamine/Q-rich-associated protein; TPA inducible protein; TPA inducible gene-1; PC2-glutamine-rich-associated protein; trinucleotide repeat containing 7 [Homo sapiens] gi|15559260|gb|AAH13985.1|AAH13985 PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein [Homo sapiens] Length = 748 Score = 49.9 bits (119), Expect = 7e-06 Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 16/98 (16%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + + DWR+ RQK+V++I + ++K + + E +F A Sbjct: 2 DVSGQETDWRST---AFRQKLVSQIEDAMRKAGVAHS--------KSSKDMESHVFLKAK 50 Query: 74 NQTDYLRKISMKML---TMETKSQNA--AGSSAAIPAA 106 + +YL ++ ++ + K A + A+ + Sbjct: 51 TRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSL 88
>gi|14276857|gb|AAK58423.1|AF328769_1 PC2-glutamine-rich-associated protein [Homo sapiens] Length = 746 Score = 49.9 bits (119), Expect = 7e-06 Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 16/98 (16%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + + DWR+ RQK+V++I + ++K + + E +F A Sbjct: 2 DVSGQETDWRST---AFRQKLVSQIEDAMRKAGVAHS--------KSSKDMESHVFLKAK 50 Query: 74 NQTDYLRKISMKML---TMETKSQNA--AGSSAAIPAA 106 + +YL ++ ++ + K A + A+ + Sbjct: 51 TRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSL 88
>gi|27734440|sp|Q96RN5|PCAP_HUMAN Positive cofactor 2 glutamine/Q-rich-associated protein (PC2 glutamine/Q-rich-associated protein) (TPA-inducible gene-1) (TIG-1) (Activator-recruited cofactor 105 kDa component) (ARC105) (CTG repeat protein 7a) Length = 788 Score = 49.9 bits (119), Expect = 9e-06 Identities = 17/98 (17%), Positives = 39/98 (39%), Gaps = 16/98 (16%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + + DWR+ RQK+V++I + ++K + + E +F A Sbjct: 2 DVSGQETDWRST---AFRQKLVSQIEDAMRKAGVAHS--------KSSKDMESHVFLKAK 50 Query: 74 NQTDYLRKISMKML---TMETKSQNA--AGSSAAIPAA 106 + +YL ++ ++ + K A + A+ + Sbjct: 51 TRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSL 88
>gi|32451779|gb|AAH54779.1| Pcqap protein [Mus musculus] Length = 749 Score = 49.1 bits (117), Expect = 1e-05 Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 16/101 (15%) Query: 14 EPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGAL 73 + + DWR+ RQK+V++I + ++K + + E +F A Sbjct: 2 DVSGQETDWRS---AAFRQKLVSQIEDAMRKAGVAHS--------KSSKDMESHVFLKAK 50 Query: 74 NQTDYLRKISMKML---TMETKSQNA--AGSSAAIPAANNG 109 + +YL ++ ++ + K A + A+ + G Sbjct: 51 TRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGG 91
>gi|25518480|pir||D86302 hypothetical protein F17F16.9 - Arabidopsis thaliana gi|9954735|gb|AAG09088.1|AC026237_9 Hypothetical protein [Arabidopsis thaliana] Length = 238 Score = 48.3 bits (115), Expect = 2e-05 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 7/92 (7%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 R+ + + I L+K P + + A R EE +F A+ + +YL + ++ Sbjct: 8 IRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESRL 67 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSI-PT 117 ++ Q + A++ T +I PT Sbjct: 68 TSLIKGRQ---LNKYKHQHADSSTLGTTITPT 96
>gi|21105779|gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] Length = 453 Score = 46.4 bits (110), Expect = 8e-05 Identities = 16/97 (16%), Positives = 41/97 (42%), Gaps = 9/97 (9%) Query: 24 TQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYL--R 80 +Q RQ+++N+ L++ P + +L +A R E ++ A ++ DYL R Sbjct: 6 SQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFR 65 Query: 81 KISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPT 117 +++ + + + ++ + + + T Sbjct: 66 SFDVRVESTLKQLLSQRRAN------PSSSVSTMVQT 96
>gi|20177999|sp|Q924H2|PCAP_MOUSE Positive cofactor 2 glutamine/Q-rich-associated protein (PC2 glutamine/Q-rich-associated protein) (mPcqap) Length = 792 Score = 45.2 bits (107), Expect = 2e-04 Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 16/94 (17%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DWR+ R K+V++I + ++K + + E +F A + +YL Sbjct: 9 DWRS---AAFRLKLVSQIEDAMRKAGVAHS--------KSSKDMESHVFLKAKTRDEYLS 57 Query: 81 KISMKML---TMETKSQNA--AGSSAAIPAANNG 109 ++ ++ + K A + A+ + G Sbjct: 58 LVARLIIHFRDIHNKKSQASVSDPMNALQSLTGG 91
>gi|15809028|ref|NP_291087.1| positive cofactor 2, glutamine/Q-rich-associated protein [Mus musculus] gi|14276859|gb|AAK58424.1|AF328770_1 PC2-glutamine-rich-associated protein [Mus musculus] Length = 667 Score = 44.5 bits (105), Expect = 3e-04 Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 16/94 (17%) Query: 21 DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLR 80 DWR+ R K+V++I + ++K + + E +F A + +YL Sbjct: 9 DWRS---AAFRLKLVSQIEDAMRKAGVAHS--------KSSKDMESHVFLKAKTRDEYLS 57 Query: 81 KISMKML---TMETKSQNA--AGSSAAIPAANNG 109 ++ ++ + K A + A+ + G Sbjct: 58 LVARLIIHFRDIHNKKSQASVSDPMNALQSLTGG 91
>gi|18394390|ref|NP_564004.1| expressed protein [Arabidopsis thaliana] gi|21618240|gb|AAM67290.1| unknown [Arabidopsis thaliana] Length = 128 Score = 41.0 bits (96), Expect = 0.004 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 7/92 (7%) Query: 30 SRQKIVNKIMETLKKHLPFSGPEGIN-ELRRIAARFEEKIFSGALNQTDYLR--KISMKM 86 R+ + + I L+K P + + A R EE +F A+ + +YL + ++ Sbjct: 8 IRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESRL 67 Query: 87 LTMETKSQNAAGSSAAIPAANNGTSIDSI-PT 117 ++ Q + A++ T +I PT Sbjct: 68 TSLIKGRQ---LNKYKHQHADSSTLGTTITPT 96
>gi|28374176|gb|AAH46263.1| Similar to PC2 (positive cofactor 2, multiprotein complex) glutamine/Q-rich-associated protein [Xenopus laevis] Length = 846 Score = 41.0 bits (96), Expect = 0.004 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 8/73 (10%) Query: 32 QKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDYLRKISMKMLTMET 91 QK+V++I E ++K + + E +F A + +YL ++ ++ Sbjct: 1 QKLVSQIDEAMRKAGVAHT--------KSSKEMESHVFLKAKTREEYLSLVARLIIHFRD 52 Query: 92 KSQNAAGSSAAIP 104 ++A+ P Sbjct: 53 IFNKKNQTAASDP 65
>gi|28871928|ref|NP_794547.1| lipoprotein, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|28855181|gb|AAO58242.1| lipoprotein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 201 Score = 38.3 bits (89), Expect = 0.025 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 31 RQKIVNKIMETLKKHLPFSGPEGINELRRIA---ARFEEKIFSGAL 73 RQ++ N +++ L L P ++EL+ A A+ E A Sbjct: 139 RQEMRNDLIQKLMARLQQLTPSRLDELQAKADAVAKAEADALEAAQ 184
>gi|15230072|ref|NP_189057.1| expressed protein [Arabidopsis thaliana] Length = 343 Score = 38.3 bits (89), Expect = 0.027 Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 6/73 (8%) Query: 11 PNGEPAMDTG-DWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRR----IAARFE 65 P P W + R I+ +I + + E + + + E Sbjct: 4 PGPRPYECVKRAWHSDRHQPIRGSIIRQIFRLAMEA-HSAATRKNKEWQEKLPVVVLKAE 62 Query: 66 EKIFSGALNQTDY 78 E ++S A ++ +Y Sbjct: 63 EIMYSKANSEEEY 75
>gi|23470798|ref|ZP_00126130.1| hypothetical protein [Pseudomonas syringae pv. syringae B728a] Length = 224 Score = 38.3 bits (89), Expect = 0.028 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 31 RQKIVNKIMETLKKHLPFSGPEGINELRRIA---ARFEEKIFSGAL 73 RQ++ N +++ + L P ++EL+ A A+ E A Sbjct: 162 RQEMRNDLIQKMMARLQQLTPSRLDELQAKADAVAKAEADALEAAQ 207
>gi|21956190|gb|AAM83255.1|AF378334_1 ARC105 [Xenopus laevis] Length = 754 Score = 37.9 bits (88), Expect = 0.034 Identities = 7/46 (15%), Positives = 19/46 (41%) Query: 59 RIAARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIP 104 + + E +F A + +YL ++ ++ + ++A P Sbjct: 10 KSSKDMESHVFLKAKTREEYLSLVARLIIHFRDILNKKSQAAATDP 55
>gi|22329083|ref|NP_680756.1| expressed protein [Arabidopsis thaliana] gi|28392894|gb|AAO41883.1| unknown protein [Arabidopsis thaliana] gi|28827750|gb|AAO50719.1| unknown protein [Arabidopsis thaliana] Length = 238 Score = 36.8 bits (85), Expect = 0.074 Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 6/76 (7%) Query: 11 PNGEPAMD-TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRR----IAARFE 65 P P W + R ++ +I + + E + + R E Sbjct: 4 PGPRPYDCIRRAWHSDRHQPMRGLLIQEIFR-IVCEIHSQSTRKNTEWQEKLPVVVLRAE 62 Query: 66 EKIFSGALNQTDYLRK 81 E ++S A ++ +Y+ Sbjct: 63 EIMYSKANSEAEYMDM 78
>gi|19920468|ref|NP_608528.1| CG4184-PA [Drosophila melanogaster] gi|5052530|gb|AAD38595.1|AF145620_1 BcDNA.GH03922 [Drosophila melanogaster] gi|7296198|gb|AAF51490.1| CG4184-PA [Drosophila melanogaster] Length = 749 Score = 36.0 bits (83), Expect = 0.13 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 11/69 (15%) Query: 19 TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78 T DW++Q RQ +++KI + L P + + A E IF + + +Y Sbjct: 2 TEDWQSQ---KFRQNVISKIHDLL--------PPNAQDQTKNAGVMENHIFRKSRTKDEY 50 Query: 79 LRKISMKML 87 L ++ + Sbjct: 51 LGLVAKLFM 59
>gi|20891927|ref|XP_147188.1| positive cofactor 2, multiprotein complex, glutamine/Q-rich-associated protein [Mus musculus] Length = 763 Score = 35.2 bits (81), Expect = 0.20 Identities = 9/56 (16%), Positives = 22/56 (39%), Gaps = 5/56 (8%) Query: 59 RIAARFEEKIFSGALNQTDYLRKISMKML---TMETKSQNA--AGSSAAIPAANNG 109 + + E +F A + +YL ++ ++ + K A + A+ + G Sbjct: 10 KSSKDMESHVFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQSLTGG 65
>gi|7506661|pir||T16726 hypothetical protein R12B2.5 - Caenorhabditis elegans Length = 760 Score = 35.2 bits (81), Expect = 0.21 Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 17/108 (15%) Query: 17 MDTGDWRTQLPPDSRQKIVNKIMETL----KKHLPFSGPEGINELRRIAARFEEKIFSGA 72 M DW + P R+ ++ ++ L + P A + EE +F+ Sbjct: 1 MSEEDWPS---PKFREHVIQRLEPELARNRQNAPNLPVP-------GDARQVEEYVFAKC 50 Query: 73 LNQTDYLRKISMKMLTMETKSQNAAGSSAAIPA---ANNGTSIDSIPT 117 +++ +Y+R I+ + + S++AA S P+ + T+ D PT Sbjct: 51 MSKDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTADPQPT 98
>gi|34499307|ref|NP_903522.1| hypothetical protein CV3852 [Chromobacterium violaceum ATCC 12472] gi|34105158|gb|AAQ61514.1| hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 350 Score = 33.3 bits (76), Expect = 0.85 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%) Query: 1 MDNNNWRPSLPNGEPAMD--TGDWRTQLPP--DSRQK-IVNKIMETLKKHLPFSGPEGIN 55 ++N P P + AMD W +QL P D R + I++ LK+ P Sbjct: 268 INNTTCTPLPPLVQIAMDIFRIHWHSQLTPQDDVRSRANQEAIVKNLKEKYPGMTDAIAK 327 Query: 56 ELRRIA 61 + ++A Sbjct: 328 AIDKVA 333
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF Posted date: Sep 15, 2003 10:23 PM Number of letters in database: 490,690,828 Number of sequences in database: 1,524,159 Lambda K H 0.311 0.128 0.369 Gapped Lambda K H 0.267 0.0497 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,611,056 Number of Sequences: 1524159 Number of extensions: 460137 Number of successful extensions: 1604 Number of sequences better than 1.0: 6 Number of HSP's better than 1.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 1595 Number of HSP's gapped (non-prelim): 9 length of query: 117 length of database: 490,690,828 effective HSP length: 93 effective length of query: 24 effective length of database: 348,944,041 effective search space: 8374656984 effective search space used: 8374656984 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 75 (33.2 bits)