BLASTP 2.2.6 [Apr-09-2003]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1056973549-0842-25663

Query= At1g15790 [1-145]
         (145 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,459,938 sequences; 468,778,868 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs



Results of PSI-Blast iteration 8

Skip to the first new sequence

Legend:
 - means that the alignment score was below the threshold on the previous iteration 
 - means that the alignment was checked on the previous iteration 


Hit list size 
Sequences with E-value BETTER than threshold
Related Structures
                                                                     Score    E
Sequences producing significant alignments:                          (bits) Value


 gi|22329593|ref|NP_173031.2|  expressed protein [Arabidopsis thal...   173   6e-43 

 gi|15218294|ref|NP_173030.1|  expressed protein [Arabidopsis thal...   149   9e-36 

 gi|24461867|gb|AAN62354.1|AF506028_23  CTV.22 [Poncirus trifoliata]    136   4e-32 

 gi|25511635|pir||B86292  F7H2.12 protein - Arabidopsis thaliana >...   133   4e-31 

 gi|2133462|pir||S60123  hypothetical protein R10E11.1 - Caenorhab...   133   4e-31 

 gi|17552710|ref|NP_499160.1|  CBP/p300 homolog CBP-1 (cbp-1) [Cae...   133   5e-31 

 gi|17552708|ref|NP_499161.1|  CBP/p300 homolog CBP-1 (cbp-1) [Cae...   133   5e-31 

 gi|31753089|gb|AAH53889.1|  Unknown (protein for IMAGE:6151364) [...   132   7e-31 

 gi|4557557|ref|NP_001420.1|  E1A binding protein p300; E1A-bindin...   130   4e-30 

 gi|21243753|ref|NP_643335.1|  transcriptional regulator [Xanthomo...   127   4e-29 

 gi|28486616|ref|XP_283295.1|  similar to E1A-associated protein p...   126   8e-29 

 gi|27666550|ref|XP_235770.1|  similar to E1A-associated protein p...   123   4e-28 

 gi|27663074|ref|XP_235502.1|  similar to E1A-associated protein p...   119   6e-27 

 gi|4758056|ref|NP_004371.1|  CREB binding protein [Homo sapiens] ...   117   2e-26 

 gi|4321116|gb|AAC51331.2|  CREB-binding protein [Homo sapiens]         117   2e-26 

 gi|482238|pir||S41033  hypothetical protein K03H1.10 - Caenorhabd...   117   3e-26 

 gi|17554044|ref|NP_499201.1|  TAZ zinc finger and KIX domain cont...   117   4e-26 

 gi|21307831|gb|AAL54859.1|  CREB-binding protein [Aplysia califor...   116   6e-26 

 gi|631119|pir||S39162  transcription coactivator CREB-binding pro...   116   7e-26 

 gi|547239|gb|AAB31182.1|  p300=transcription coactivator {N-termi...   114   3e-25 

 gi|19547885|gb|AAL87531.1|  CREB-binding protein [Mus musculus] >...   113   4e-25 

 gi|7487910|pir||T01055  hypothetical protein YUP8H12R.38 - Arabid...   113   5e-25 

 gi|737920|prf||1923401A  protein CBP                                   113   6e-25 

 gi|1345703|sp|P45481|CBP_MOUSE  CREB-binding protein >gi|481698|p...   112   8e-25 

 gi|24461860|gb|AAN62347.1|AF506028_14  CTV.20 [Poncirus trifoliata]    112   9e-25 

 gi|2996629|gb|AAC08447.1|  CBP [Homo sapiens]                          112   1e-24 

 gi|18412221|ref|NP_565197.1|  p300/CBP acetyltransferase-related ...   112   1e-24 

 gi|15219327|ref|NP_173115.1|  expressed protein [Arabidopsis thal...   110   4e-24 

 gi|28071313|dbj|BAC56002.1|  P0705A05.20 [Oryza sativa (japonica ...   109   6e-24 

 gi|27881767|gb|AAH44677.1|  Similar to CREB binding protein (Rubi...   107   4e-23 

 gi|31204369|ref|XP_311133.1|  ENSANGP00000004748 [Anopheles gambi...   104   2e-22 

 gi|17508323|ref|NP_493339.1|  KIX domain containing protein famil...   103   4e-22 

 gi|17552402|ref|NP_497144.1|  TAZ zinc finger family member [Caen...   102   1e-21 

 gi|7511830|pir||T13828  CREB-binding protein homolog - fruit fly ...   100   4e-21 

 gi|24640865|ref|NP_524642.2|  nejire CG15319-PB [Drosophila melan...    99   1e-20 

 gi|4139873|pdb|1KDX|A  Chain A, Kix Domain Of Mouse Cbp (Creb Bin...    99   1e-20 

 gi|17567279|ref|NP_509376.1|  KIX domain containing protein famil...    90   5e-18 

 gi|17552400|ref|NP_497145.1|  TAZ zinc finger family member [Caen...    87   4e-17 

 gi|17559186|ref|NP_507512.1|  Predicted CDS, putative cytoplasmic...    86   9e-17 

 gi|25396635|pir||E89403  protein C06H5.4 [imported] - Caenorhabdi...    85   1e-16 

 gi|15230656|ref|NP_187904.1|  CREB-binding protein -related [Arab...    84   3e-16 

 gi|19074594|ref|NP_586100.1|  MADS domain [Encephalitozoon cunicu...    80   4e-15 

 gi|27260984|dbj|BAC45101.1|  OJ1705_C03.23 [Oryza sativa (japonic...    80   5e-15 

 gi|7493813|pir||T18235  transcription activator GAL11 homolog - y...    79   9e-15 

 gi|25518480|pir||D86302  hypothetical protein F17F16.9 - Arabidop...    79   1e-14 

 gi|21105779|gb|AAM34787.1|AF512558_1  HAC5 [Arabidopsis thaliana]       78   2e-14 

 gi|18394390|ref|NP_564004.1|  expressed protein [Arabidopsis thal...    69   8e-12 

 gi|23127315|ref|ZP_00109188.1|  hypothetical protein [Nostoc punc...    66   7e-11 

 gi|15226772|ref|NP_178842.1|  hypothetical protein [Arabidopsis t...    66   1e-10 

 gi|27260985|dbj|BAC45102.1|  OJ1705_C03.24 [Oryza sativa (japonic...    46   7e-05 


Sequences with E-value WORSE than threshold


 gi|25148761|ref|NP_741151.1|  Putative nuclear protein, nematode ...    39   0.017 

 gi|4104919|gb|AAD13337.1|  poly(A) binding protein I [Trypanosoma...    38   0.022 

 gi|22329083|ref|NP_680756.1|  expressed protein [Arabidopsis thal...    38   0.029 

 gi|15230072|ref|NP_189057.1|  expressed protein [Arabidopsis thal...    37   0.034 

 gi|17549180|ref|NP_522520.1|  PROBABLE SIGMA-54 INTERACTING TRANS...    37   0.045 

 gi|25148756|ref|NP_741152.1|  Putative nuclear protein, nematode ...    36   0.10  

 gi|20149720|ref|NP_619589.1|  oxidized low density lipoprotein (l...    36   0.13  

 gi|15604738|ref|NP_219522.1|  Signal Peptidase I [Chlamydia trach...    35   0.21  

 gi|27260988|dbj|BAC45105.1|  OJ1705_C03.27 [Oryza sativa (japonic...    35   0.22  

 gi|28871928|ref|NP_794547.1|  lipoprotein, putative [Pseudomonas ...    35   0.22  

 gi|7513707|pir||JE0111  lectin-like oxidized LDL receptor - mouse       35   0.26  

 gi|19112182|ref|NP_595390.1|  putative transcriptional regulatory...    34   0.40  

 gi|7506661|pir||T16726  hypothetical protein R12B2.5 - Caenorhabd...    34   0.51  

 gi|7494984|pir||T25469  hypothetical protein B0507.8 - Caenorhabd...    33   0.72  


Alignments








>gi|22329593|ref|NP_173031.2|   expressed protein [Arabidopsis thaliana]
 gi|25513497|pir||C86292   F7H2.13 protein - Arabidopsis thaliana
 gi|8927658|gb|AAF82149.1|AC034256_13   ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene.
           [Arabidopsis thaliana]
 gi|12083256|gb|AAG48787.1|AF332424_1   unknown protein [Arabidopsis thaliana]
          Length = 179

 Score =  173 bits (438), Expect = 6e-43
 Identities = 145/145 (100%), Positives = 145/145 (100%)

Query: 1   MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60
           MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ
Sbjct: 1   MDTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ 60

Query: 61  TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120
           TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS
Sbjct: 61  TEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120

Query: 121 RQKNINALLDTLKKIVPHSGKEGID 145
           RQKNINALLDTLKKIVPHSGKEGID
Sbjct: 121 RQKNINALLDTLKKIVPHSGKEGID 145




 Score = 78.7 bits (193), Expect = 2e-14
 Identities = 34/72 (47%), Positives = 47/72 (65%)

Query: 3   TTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62
            TGDWRTQ P  SR + +N +++T  K +P    EG +EL +IAV  EE +FN+A NQ +
Sbjct: 108 NTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQED 167

Query: 63  YLRQICMKMLNM 74
           YL +I +KM  M
Sbjct: 168 YLGKISLKMRTM 179



>gi|15218294|ref|NP_173030.1|   expressed protein [Arabidopsis thaliana]
          Length = 1335

 Score =  149 bits (376), Expect = 9e-36
 Identities = 69/128 (53%), Positives = 82/128 (64%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           TGDWRTQ P  SR +IVNKIMET  K LPF  PEG NELR+IA RFEEK+F+ A NQT+Y
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQK 123
           LR+I MKML METKSQNAAGSS+A           S+P N+  +  G   T Q Q  +  
Sbjct: 79  LRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPTNQGQLLPGSLSTNQSQAPQPL 138

Query: 124 NINALLDT 131
               + + 
Sbjct: 139 LSQTMQNN 146




 Score = 67.5 bits (164), Expect = 4e-11
 Identities = 31/48 (64%), Positives = 40/48 (83%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+
Sbjct: 8   PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN 55



>gi|24461867|gb|AAN62354.1|AF506028_23   CTV.22 [Poncirus trifoliata]
          Length = 1405

 Score =  136 bits (344), Expect = 4e-32
 Identities = 56/135 (41%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           TGDWRTQ    SR RIVNKIM+T  + LPF   +G NEL+KIA RFEEK++  AS+Q++Y
Sbjct: 34  TGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDY 93

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPN------NEPAVNTGDWRTQQP 117
           LR+I +KML+ME+KSQNA  +S   +N       P   +      N+           Q 
Sbjct: 94  LRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPGSMQNQVHNQGQSLPIPLSANQS 153

Query: 118 QDSRQKNINALLDTL 132
           Q  +Q     + + +
Sbjct: 154 QVRQQLLSQNIQNNM 168




 Score = 67.1 bits (163), Expect = 4e-11
 Identities = 23/48 (47%), Positives = 36/48 (75%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           P+ P  E  ++TGDWRTQ   DSRQ+ +N ++DTLK+ +P SG++G++
Sbjct: 23  PTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLN 70



>gi|25511635|pir||B86292   F7H2.12 protein - Arabidopsis thaliana
 gi|8927657|gb|AAF82148.1|AC034256_12   EST gb|N38213 comes from this gene. [Arabidopsis thaliana]
          Length = 1366

 Score =  133 bits (336), Expect = 4e-31
 Identities = 69/159 (43%), Positives = 82/159 (51%), Gaps = 31/159 (19%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQ--- 60
           TGDWRTQ P  SR +IVNKIMET  K LPF  PEG NELR+IA RFEEK+F+ A NQ   
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQRFV 78

Query: 61  ----------------------------TEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92
                                       T+YLR+I MKML METKSQNAAGSS+A     
Sbjct: 79  RQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTMETKSQNAAGSSAAIPAAN 138

Query: 93  PLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDT 131
                 S+P N+  +  G   T Q Q  +      + + 
Sbjct: 139 NGTSIDSIPTNQGQLLPGSLSTNQSQAPQPLLSQTMQNN 177




 Score = 67.5 bits (164), Expect = 3e-11
 Identities = 31/48 (64%), Positives = 40/48 (83%)

Query: 98  PSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           PS+PN EPA++TGDWRTQ P DSRQK +N +++TLKK +P SG EGI+
Sbjct: 8   PSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGIN 55



>gi|2133462|pir||S60123   hypothetical protein R10E11.1 - Caenorhabditis elegans
          Length = 2027

 Score =  133 bits (335), Expect = 4e-31
 Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 3/105 (2%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLP--FIRPEGTNELRKIAVRFEEKLFNNASN 59
           D T +W  Q     R+ +V K+++    +     +      +L   A + E+++F +A++
Sbjct: 593 DCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFESAND 652

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104
           + EY   +  K+  ++ K      +S  +            P+NE
Sbjct: 653 REEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 696



>gi|17552710|ref|NP_499160.1|   CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans]
 gi|20455476|sp|P34545|CBP1_CAEEL   Protein cbp-1
 gi|25299632|pir||G88564   protein R10E11.1 [imported] - Caenorhabditis elegans
 gi|17645979|emb|CAD18875.1|   C. elegans CBP-1 protein (corresponding sequence R10E11.1b)
           [Caenorhabditis elegans]
          Length = 2056

 Score =  133 bits (335), Expect = 5e-31
 Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 3/105 (2%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLP--FIRPEGTNELRKIAVRFEEKLFNNASN 59
           D T +W  Q     R+ +V K+++    +     +      +L   A + E+++F +A++
Sbjct: 593 DCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFESAND 652

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104
           + EY   +  K+  ++ K      +S  +            P+NE
Sbjct: 653 REEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 696



>gi|17552708|ref|NP_499161.1|   CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans]
 gi|14530537|emb|CAA82353.2|   C. elegans CBP-1 protein (corresponding sequence R10E11.1a)
           [Caenorhabditis elegans]
          Length = 2045

 Score =  133 bits (335), Expect = 5e-31
 Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 3/105 (2%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLP--FIRPEGTNELRKIAVRFEEKLFNNASN 59
           D T +W  Q     R+ +V K+++    +     +      +L   A + E+++F +A++
Sbjct: 582 DCTKEWHHQVTKDLRNHLVGKLVKAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFESAND 641

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104
           + EY   +  K+  ++ K      +S  +            P+NE
Sbjct: 642 REEYYHLLAEKIYKIQ-KELQEKKNSRLNQGAAAHDQYAIPPSNE 685



>gi|31753089|gb|AAH53889.1|   Unknown (protein for IMAGE:6151364) [Homo sapiens]
          Length = 1553

 Score =  132 bits (334), Expect = 7e-31
 Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 26/143 (18%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 568 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 624

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSS-----------------ADDNTPPLVPEPSVP 101
           N+ EY   +  K+  ++ K       +                   +       P+P + 
Sbjct: 625 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQPGMT 683

Query: 102 NNEPAVNTGDWRTQQPQDSRQKN 124
           +N P  +    R   P     + 
Sbjct: 684 SNGPLPDPSMIRGSVPNQMMPRI 706



>gi|4557557|ref|NP_001420.1|   E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens]
 gi|3024341|sp|Q09472|P300_HUMAN   E1A-associated protein p300
 gi|627657|pir||A54277   transcription adaptor protein p300 - human
 gi|495301|gb|AAA18639.1|   p300 protein
          Length = 2414

 Score =  130 bits (327), Expect = 4e-30
 Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 26/143 (18%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 568 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 624

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSS-----------------ADDNTPPLVPEPSVP 101
           N+ EY   +  K+  ++ K       +                   +       P+P + 
Sbjct: 625 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQPGMT 683

Query: 102 NNEPAVNTGDWRTQQPQDSRQKN 124
           +N P  +    R   P     + 
Sbjct: 684 SNGPLPDPSMIRGSVPNQMMPRI 706



>gi|21243753|ref|NP_643335.1|   transcriptional regulator [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109340|gb|AAM37871.1|   transcriptional regulator [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 534

 Score =  127 bits (319), Expect = 4e-29
 Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 11/131 (8%)

Query: 10  QFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICM 69
           +        +   +M+       +  PE   EL ++ +R             + +++   
Sbjct: 319 RHGLDHGQVVTEVLMDALT---HYSWPENLQELERVVLRLAVMTAGRPIGSAD-IQRHAP 374

Query: 70  KMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALL 129
           ++L    K       ++       L  EP+ P         DW    P    Q+    L 
Sbjct: 375 RLLEGRVKGAQHDACATMSQ-PADLPAEPTPPGT-----PVDWIDGLPHRPGQRLAT-LH 427

Query: 130 DTLKKIVPHSG 140
           D L++ + H G
Sbjct: 428 DALRRALVHLG 438



>gi|28486616|ref|XP_283295.1|   similar to E1A-associated protein p300 [Mus musculus]
 gi|29244384|ref|NP_808489.1|   hypothetical protein A730011L11 [Mus musculus]
 gi|26335221|dbj|BAC31311.1|   unnamed protein product [Mus musculus]
          Length = 714

 Score =  126 bits (316), Expect = 8e-29
 Identities = 19/143 (13%), Positives = 42/143 (29%), Gaps = 26/143 (18%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 569 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 625

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSS-----------------ADDNTPPLVPEPSVP 101
           N+ EY   +  K+  ++ K       +                   +  +        + 
Sbjct: 626 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAPGMGPVPMNTGSNMGQQPTGMT 684

Query: 102 NNEPAVNTGDWRTQQPQDSRQKN 124
            N P  +    R   P     + 
Sbjct: 685 TNGPVPDPSMIRGSVPNHMMPRM 707



>gi|27666550|ref|XP_235770.1|   similar to E1A-associated protein p300 [Rattus norvegicus]
          Length = 1605

 Score =  123 bits (310), Expect = 4e-28
 Identities = 20/156 (12%), Positives = 45/156 (28%), Gaps = 39/156 (25%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 197 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 253

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSAD----------------DNTPPLVPEPSVPN 102
           N+ EY   +  K+  ++ K       +                   +  P +  +P+   
Sbjct: 254 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPSAPGMVPVPMNTAPNMGQQPTGMT 312

Query: 103 NE--------------PAVNTGDWRTQQPQDSRQKN 124
            +              P  +    R   P     + 
Sbjct: 313 TKTKGYLTISVSTPDGPLPDPSMIRGSVPNQMMPRM 348



>gi|27663074|ref|XP_235502.1|   similar to E1A-associated protein p300 [Rattus norvegicus]
          Length = 2156

 Score =  119 bits (300), Expect = 6e-27
 Identities = 20/156 (12%), Positives = 45/156 (28%), Gaps = 39/156 (25%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 197 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 253

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSAD----------------DNTPPLVPEPSVPN 102
           N+ EY   +  K+  ++ K       +                   +  P +  +P+   
Sbjct: 254 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPSAPGMVPVPMNTAPNMGQQPTGMT 312

Query: 103 NE--------------PAVNTGDWRTQQPQDSRQKN 124
            +              P  +    R   P     + 
Sbjct: 313 TKTKGYLTISVSTPDGPLPDPSMIRGSVPNQMMPRM 348



>gi|4758056|ref|NP_004371.1|   CREB binding protein [Homo sapiens]
 gi|3023440|sp|Q92793|CBP_HUMAN   CREB-binding protein
 gi|2443859|gb|AAC51770.1|   CREB-binding protein
          Length = 2442

 Score =  117 bits (295), Expect = 2e-26
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 589 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 645

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNEPAVNT 109
           ++ EY   +  K+  ++ K       S                P    P +P  +P    
Sbjct: 646 SRDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPP 704

Query: 110 G---DWRTQQPQDSR 121
                    + Q S+
Sbjct: 705 NGPLSLPVNRMQVSQ 719



>gi|4321116|gb|AAC51331.2|   CREB-binding protein [Homo sapiens]
          Length = 2442

 Score =  117 bits (295), Expect = 2e-26
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 589 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 645

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNEPAVNT 109
           ++ EY   +  K+  ++ K       S                P    P +P  +P    
Sbjct: 646 SRDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPP 704

Query: 110 G---DWRTQQPQDSR 121
                    + Q S+
Sbjct: 705 NGPLSLPVNRMQVSQ 719



>gi|482238|pir||S41033   hypothetical protein K03H1.10 - Caenorhabditis elegans  (fragment)
          Length = 316

 Score =  117 bits (294), Expect = 3e-26
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 1/92 (1%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           T +W  Q  +  R+ IV K+++        +      +L   A + E+++F  A ++  Y
Sbjct: 160 TKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYARKVEKEVFETAIDRKNY 219

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLV 95
              +  K+  ++ K      +S  +       
Sbjct: 220 YHLLAEKIYEIQ-KELQEKKNSRLNQGAAQSP 250



>gi|17554044|ref|NP_499201.1|   TAZ zinc finger and KIX domain containing protein family member
           (36.7 kD) [Caenorhabditis elegans]
 gi|25395947|pir||D88569   protein K03H1.10 [imported] - Caenorhabditis elegans
 gi|3877003|emb|CAA82940.1|   Hypothetical protein K03H1.10 [Caenorhabditis elegans]
 gi|3878179|emb|CAA82665.1|   Hypothetical protein K03H1.10 [Caenorhabditis elegans]
          Length = 322

 Score =  117 bits (293), Expect = 4e-26
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 1/92 (1%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEY 63
           T +W  Q  +  R+ IV K+++        +      +L   A + E+++F  A ++  Y
Sbjct: 166 TKEWHRQVTNDLRNHIVGKLVKAICPAPEMMNDIRLKDLNAYARKVEKEVFETAIDRKNY 225

Query: 64  LRQICMKMLNMETKSQNAAGSSSADDNTPPLV 95
              +  K+  ++ K      +S  +       
Sbjct: 226 YHLLAEKIYEIQ-KELQEKKNSRLNQGAAQSP 256



>gi|21307831|gb|AAL54859.1|   CREB-binding protein [Aplysia californica]
          Length = 2245

 Score =  116 bits (291), Expect = 6e-26
 Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 8/110 (7%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLP--FIRPEGTNELRKIAVRFEEKLFNNASNQT 61
             DW  Q     R+ +V+K+++          +R      L   A + E  ++ +A+N+ 
Sbjct: 502 RKDWHAQVTQDLRNHLVHKLVQAIFPTPDQATLRDSRMKNLVAYARKVEGDMYESANNRG 561

Query: 62  EYLRQICMKMLNMETKSQNAAGSSSAD-DNTPPLVPEPSVPNNEPAVNTG 110
           +Y   +  K+  ++ K             N P       VP  +  ++  
Sbjct: 562 QYYHLLAEKIYKIQ-KELEEKRIQRMKVQNAPN----AQVPGMQGQIHPN 606



>gi|631119|pir||S39162   transcription coactivator CREB-binding protein - human
          Length = 2440

 Score =  116 bits (291), Expect = 7e-26
 Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 589 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 645

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNEPAVNT 109
           ++ EY   +  K+  ++ K       S                P    P +P  +     
Sbjct: 646 SRDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQSVRPP 704

Query: 110 G---DWRTQQPQDSR 121
                    + Q S+
Sbjct: 705 NGPLSLPVNRMQVSQ 719



>gi|547239|gb|AAB31182.1|   p300=transcription coactivator {N-terminal} [mice, Peptide Partial,
           688 aa]
          Length = 688

 Score =  114 bits (285), Expect = 3e-25
 Identities = 18/119 (15%), Positives = 39/119 (32%), Gaps = 15/119 (12%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 569 RKQWHEDITQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 625

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSAD------DNTPPLVPEPSVPNNEPAVNTGD 111
           N+ EY   +  K+  ++ K       +         +         +  +N     TG 
Sbjct: 626 NRAEYYHLLAEKIYKIQ-KELEEKRRTRLQKQNMLPNAPGMGPVPMNTGSNMGQQPTGM 683



>gi|19547885|gb|AAL87531.1|   CREB-binding protein [Mus musculus]
 gi|19547887|gb|AAL87532.1|   CREB-binding protein [Mus musculus]
          Length = 2429

 Score =  113 bits (284), Expect = 4e-25
 Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 582 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 638

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNEPAVNT 109
           ++ EY   +  K+  ++ K       S                     P +P  +     
Sbjct: 639 SRDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPASGAQPPVIPPAQSVRPP 697

Query: 110 G---DWRTQQPQDSR 121
                    + Q S+
Sbjct: 698 NGPLPLPVNRMQVSQ 712



>gi|7487910|pir||T01055   hypothetical protein YUP8H12R.38 - Arabidopsis thaliana
 gi|3152587|gb|AAC17068.1|   Similar to CREB-binding protein homolog gb|U88570 from D.
           melanogaster and contains similarity to
           callus-associated protein gb|U01961 from Nicotiana
           tabacum.  EST gb|W43427 comes from this gene.
           [Arabidopsis thaliana]
          Length = 1516

 Score =  113 bits (283), Expect = 5e-25
 Identities = 16/104 (15%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 15  SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR--QICMKM 71
            R  +  +I     ++ P    E +  +   +A R EE LF  A+ + +Y+    +  ++
Sbjct: 51  LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110

Query: 72  LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQ 115
            ++    Q    +    +++      P+        N     T 
Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNPNLMITS 154



>gi|737920|prf||1923401A   protein CBP
          Length = 2441

 Score =  113 bits (283), Expect = 6e-25
 Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W  +     RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 588 RKGWHERVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 644

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNEPAVNT 109
           ++ EY   +  K+  ++ K       +                     P +P  +     
Sbjct: 645 SRDEYYHLLAEKIYKIQ-KELEEKRRTRLHKQGILGNQPALPASGAQPPVIPPAQSVRPP 703

Query: 110 G---DWRTQQPQDSR 121
                    + Q S+
Sbjct: 704 NGPLPLPVNRMQVSQ 718



>gi|1345703|sp|P45481|CBP_MOUSE   CREB-binding protein
 gi|481698|pir||S39161   CREB-binding protein - mouse
 gi|435855|gb|AAB28651.1|   CREB-binding protein; CBP [Mus sp.]
          Length = 2441

 Score =  112 bits (281), Expect = 8e-25
 Identities = 19/135 (14%), Positives = 41/135 (30%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 588 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 644

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNEPAVNT 109
           ++ EY   +  K+  ++ K       +                     P +P  +     
Sbjct: 645 SRDEYYHLLAEKIYKIQ-KELEEKRRTRLHKQGILGNQPALPASGAQPPVIPPAQSVRPP 703

Query: 110 G---DWRTQQPQDSR 121
                    + Q S+
Sbjct: 704 NGPLPLPVNRMQVSQ 718



>gi|24461860|gb|AAN62347.1|AF506028_14   CTV.20 [Poncirus trifoliata]
          Length = 3148

 Score =  112 bits (281), Expect = 9e-25
 Identities = 52/107 (48%), Positives = 71/107 (66%), Gaps = 7/107 (6%)

Query: 6   DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
           DWR      SR RIVNKIM+T  + LPF  PEG NEL++IA RFEEK+F +A++Q++YLR
Sbjct: 16  DWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQSDYLR 75

Query: 66  QICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDW 112
           +I +KML+ME++SQNA+GS     N PP       P  +  ++T   
Sbjct: 76  KISLKMLSMESRSQNASGS-----NEPPHPGIK--PLTKEGLDTSIL 115




 Score = 73.3 bits (179), Expect = 7e-13
 Identities = 17/39 (43%), Positives = 27/39 (69%)

Query: 107 VNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
           ++  DWR     DSRQ+ +N ++DTLK+ +P SG EG++
Sbjct: 12  LDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLN 50



>gi|2996629|gb|AAC08447.1|   CBP [Homo sapiens]
          Length = 555

 Score =  112 bits (281), Expect = 1e-24
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 21/135 (15%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 323 RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 379

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDN---------TPPLVPEPSVPNNEPAVNT 109
           ++ EY   +  K+  ++ K       S                P    P +P  +P    
Sbjct: 380 SRDEYYHLLAEKIYKIQ-KELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPP 438

Query: 110 G---DWRTQQPQDSR 121
                    + Q S+
Sbjct: 439 NGPLSLPVNRMQVSQ 453



>gi|18412221|ref|NP_565197.1|   p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana]
 gi|12597461|gb|AAG60059.1|   p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana]
          Length = 1654

 Score =  112 bits (280), Expect = 1e-24
 Identities = 16/104 (15%), Positives = 37/104 (35%), Gaps = 3/104 (2%)

Query: 15  SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR--QICMKM 71
            R  +  +I     ++ P    E +  +   +A R EE LF  A+ + +Y+    +  ++
Sbjct: 51  LRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNPSTLEPRL 110

Query: 72  LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQ 115
            ++    Q    +    +++      P+        N     T 
Sbjct: 111 ASLIKGRQLNNYNQRHANSSSVGTMIPTPGLQHSGGNPNLMITS 154



>gi|15219327|ref|NP_173115.1|   expressed protein [Arabidopsis thaliana]
          Length = 1706

 Score =  110 bits (275), Expect = 4e-24
 Identities = 15/104 (14%), Positives = 38/104 (36%), Gaps = 3/104 (2%)

Query: 15  SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLRQ--ICMKM 71
            R  +   +     ++ P      +  +   +A R EE LF  A  + +Y+ +  +  ++
Sbjct: 73  LRQYMQTLVFNMLQQRQPSPADAASKAKYMDVARRLEEGLFKMAVTKEDYMNRSTLESRI 132

Query: 72  LNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQ 115
            ++    Q    +    +++      P+   ++ A N     T 
Sbjct: 133 TSLIKGRQINNYNQRHANSSSVGTMIPTPGLSQTAGNPNLMVTS 176



>gi|28071313|dbj|BAC56002.1|   P0705A05.20 [Oryza sativa (japonica cultivar-group)]
          Length = 1359

 Score =  109 bits (274), Expect = 6e-24
 Identities = 51/93 (54%), Positives = 68/93 (73%)

Query: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64
           GDWR+Q  S +R+RIVNKIM+T  K LP   PEG NEL+KIAVRFEEK++  A++Q++YL
Sbjct: 35  GDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFEEKIYTAATSQSDYL 94

Query: 65  RQICMKMLNMETKSQNAAGSSSADDNTPPLVPE 97
           R+I +KML+METK+Q   G++    N  P   E
Sbjct: 95  RKISLKMLSMETKTQQNPGNAQVIQNQNPPGSE 127




 Score = 58.2 bits (140), Expect = 2e-08
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 91  TPPLVPEPSVPNNEPAVNTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGID 145
                 +P+ P   PA+  GDWR+Q   ++R + +N ++DTLKK +P S  EG++
Sbjct: 18  AASGGIDPNAP--APALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLN 70



>gi|27881767|gb|AAH44677.1|   Similar to CREB binding protein (Rubinstein-Taybi syndrome)
           [Xenopus laevis]
          Length = 1047

 Score =  107 bits (267), Expect = 4e-23
 Identities = 18/112 (16%), Positives = 37/112 (33%), Gaps = 10/112 (8%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
              W        R+ +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 578 RKAWHEHVTQDLRNHLVHKLVQAI---FPTPDPAALKDRRMENLVAYARKVEGDMYESAN 634

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSAD-DNTPPLVPEPSVPNNEPAVNT 109
           ++ EY   +  K+  ++ K       S                P  +P   T
Sbjct: 635 SRDEYYHFLAEKIYKIQ-KELEEKRRSRLQKQGIMSSQAPLQAPGAQPTALT 685



>gi|31204369|ref|XP_311133.1|   ENSANGP00000004748 [Anopheles gambiae]
 gi|30178093|gb|EAA06516.2|   ENSANGP00000004748 [Anopheles gambiae str. PEST]
          Length = 2572

 Score =  104 bits (261), Expect = 2e-22
 Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 4   TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
           T DW        R+ +V+K+++      P   P    +     L   A + E  ++  A+
Sbjct: 742 TKDWHHSVTPDLRNHLVHKLVQAI---FPSPDPSAMFDKRMYNLVAYAKKVEGDMYEMAN 798

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSA 87
           +++EY   +  K+  ++ K          
Sbjct: 799 SRSEYYHLLAEKIYKIQ-KELEEKRQKRK 826



>gi|17508323|ref|NP_493339.1|   KIX domain containing protein family member (80.3 kD)
           [Caenorhabditis elegans]
 gi|7505888|pir||T23651   hypothetical protein M01E5.6 - Caenorhabditis elegans
 gi|3878635|emb|CAB07643.1|   Hypothetical protein M01E5.6 [Caenorhabditis elegans]
 gi|3879438|emb|CAB03290.1|   Hypothetical protein M01E5.6 [Caenorhabditis elegans]
          Length = 702

 Score =  103 bits (258), Expect = 4e-22
 Identities = 15/106 (14%), Positives = 44/106 (41%), Gaps = 6/106 (5%)

Query: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLP---FIRPEGTNELRKIAVRFEEKLFNNAS 58
           +T+ +W        R+ +V K+++    ++     +  E   +L   A + E ++   ++
Sbjct: 597 NTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEASN 653

Query: 59  NQTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNE 104
           ++ EY R + + +  +  K+      ++  ++  P      +  N 
Sbjct: 654 DRDEYYRLMQLTVDQILKKTLKKDQRATEHNHQQPTQSSDELAKNH 699



>gi|17552402|ref|NP_497144.1|   TAZ zinc finger family member [Caenorhabditis elegans]
 gi|7496697|pir||T33579   hypothetical protein C29F9.6 - Caenorhabditis elegans
 gi|3790688|gb|AAC68748.1|   Hypothetical protein C29F9.6 [Caenorhabditis elegans]
          Length = 228

 Score =  102 bits (254), Expect = 1e-21
 Identities = 16/97 (16%), Positives = 39/97 (40%), Gaps = 2/97 (2%)

Query: 3   TTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTE 62
           T+  W ++ P   R  ++ +I +  +       P    ++++ A   E ++F  A ++ E
Sbjct: 116 TSQPWHSEVPKTDREAVIERISKHIMLHPQRFEP--IWKIKEDARAAELQIFEAAGSRDE 173

Query: 63  YLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPS 99
           Y R +  +    + K+    G  +  +       +P 
Sbjct: 174 YYRMVEERAPREQDKAPEGPGQEAQKEEKGAGEEDPD 210



>gi|7511830|pir||T13828   CREB-binding protein homolog - fruit fly (Drosophila melanogaster)
 gi|1916930|gb|AAB53050.1|   CREB-binding protein homolog [Drosophila melanogaster]
          Length = 3190

 Score =  100 bits (250), Expect = 4e-21
 Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 9/91 (9%)

Query: 2    DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNN 56
            D   DWR    +  R+ +V+K+++      P   P    +     L   A + E+ ++  
Sbjct: 938  DNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994

Query: 57   ASNQTEYLRQICMKMLNMETKSQNAAGSSSA 87
            A +++EY   +  K+  ++ K          
Sbjct: 995  AKSRSEYYHLLAEKIYKIQ-KELEEKRLKRK 1024



>gi|24640865|ref|NP_524642.2|   nejire CG15319-PB [Drosophila melanogaster]
 gi|22833041|gb|AAF46516.2|   CG15319-PB [Drosophila melanogaster]
          Length = 3276

 Score = 99.1 bits (246), Expect = 1e-20
 Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 9/91 (9%)

Query: 2    DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNN 56
            D   DWR    +  R+ +V+K+++      P   P    +     L   A + E+ ++  
Sbjct: 938  DNEKDWRESVTADLRNHLVHKLVQAI---FPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994

Query: 57   ASNQTEYLRQICMKMLNMETKSQNAAGSSSA 87
            A +++EY   +  K+  ++ K          
Sbjct: 995  AKSRSEYYHLLAEKIYKIQ-KELEEKRLKRK 1024



>gi|4139873|pdb|1KDX|A   Chain A, Kix Domain Of Mouse Cbp (Creb Binding Protein) In
          Complex With Phosphorylated Kinase Inducible Domain
          (Pkid) Of Rat Creb (Cyclic Amp Response Element Binding
          Protein), Nmr 17 Structures
          Length = 81

 Score = 99.1 bits (246), Expect = 1e-20
 Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 4  TGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNE-----LRKIAVRFEEKLFNNAS 58
             W        RS +V+K+++      P   P    +     L   A + E  ++ +A+
Sbjct: 3  RKGWHEHVTQDLRSHLVHKLVQAI---FPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 59

Query: 59 NQTEYLRQICMKMLNMETKSQN 80
          ++ EY   +  K+  ++ + + 
Sbjct: 60 SRDEYYHLLAEKIYKIQKELEE 81



>gi|17567279|ref|NP_509376.1|   KIX domain containing protein family member [Caenorhabditis
           elegans]
 gi|7499689|pir||T16139   hypothetical protein F22F1.3 - Caenorhabditis elegans
 gi|1118044|gb|AAA83283.1|   Hypothetical protein F22F1.3 [Caenorhabditis elegans]
          Length = 295

 Score = 90.2 bits (223), Expect = 5e-18
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 15  SRSRIVNKIMETQLKQLPF--IRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKML 72
            R  ++ KI+   + +            EL++ A   E+K F     + EY  ++   +L
Sbjct: 70  LRQYMITKIVREAVPRPNSDAKNDARMIELKEYATFMEKKSFEKVQTKDEYYAELARIIL 129

Query: 73  NMETKSQNAAGSSSADDNTPPLVP 96
           +M+   Q+    S  D  +     
Sbjct: 130 SMQKHLQSRPKGSYEDPYSNIPPS 153



>gi|17552400|ref|NP_497145.1|   TAZ zinc finger family member [Caenorhabditis elegans]
 gi|7496696|pir||T33580   hypothetical protein C29F9.5 - Caenorhabditis elegans
 gi|3790687|gb|AAC68747.1|   Hypothetical protein C29F9.5 [Caenorhabditis elegans]
          Length = 226

 Score = 87.1 bits (215), Expect = 4e-17
 Identities = 12/86 (13%), Positives = 31/86 (36%), Gaps = 2/86 (2%)

Query: 7   WRTQFPSASRSRIVNKIMETQLK--QLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64
           W  + P   RS ++ KI +  +   +   +     +  ++ +   E ++F+ A     Y 
Sbjct: 118 WHLEVPKTYRSELIEKIYKGIMSNVKPGTLSEAQMDTWKEYSRSAELQIFDTAQKLEAYY 177

Query: 65  RQICMKMLNMETKSQNAAGSSSADDN 90
                K+   +        +   D++
Sbjct: 178 HMAREKVCRYQEGFPRRQKTEEKDES 203



>gi|17559186|ref|NP_507512.1|   Predicted CDS, putative cytoplasmic protein, nematode specific
           [Caenorhabditis elegans]
 gi|7498278|pir||T20398   hypothetical protein E01B7.2 - Caenorhabditis elegans
 gi|5824421|emb|CAB54214.1|   Hypothetical protein E01B7.2 [Caenorhabditis elegans]
          Length = 230

 Score = 86.0 bits (212), Expect = 9e-17
 Identities = 16/70 (22%), Positives = 27/70 (38%)

Query: 6   DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
           DW+       R + V KI+ T         P   +EL   +   E   ++ A N+  Y  
Sbjct: 56  DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 115

Query: 66  QICMKMLNME 75
            I   + +M+
Sbjct: 116 GIESMIQSMQ 125



>gi|25396635|pir||E89403   protein C06H5.4 [imported] - Caenorhabditis elegans
          Length = 337

 Score = 85.2 bits (210), Expect = 1e-16
 Identities = 16/70 (22%), Positives = 27/70 (38%)

Query: 6   DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
           DW+       R + V KI+ T         P   +EL   +   E   ++ A N+  Y  
Sbjct: 177 DWQKDVTLEDRMKNVQKIVNTFYCTKSGPHPRRIDELMWFSREMEIIFYSRADNRYLYDG 236

Query: 66  QICMKMLNME 75
            I   + +M+
Sbjct: 237 GIESMIQSMQ 246



>gi|15230656|ref|NP_187904.1|   CREB-binding protein -related [Arabidopsis thaliana]
 gi|15795129|dbj|BAB02507.1|   CREB-binding protein-like [Arabidopsis thaliana]
          Length = 1670

 Score = 84.4 bits (208), Expect = 3e-16
 Identities = 13/100 (13%), Positives = 41/100 (41%), Gaps = 6/100 (6%)

Query: 9   TQFPSASRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYL--R 65
           +Q     R  ++N+      ++ P    + +  +L ++A R E  ++  A+++ +YL  R
Sbjct: 37  SQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFR 96

Query: 66  QICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEP 105
              +++ +   +  +      A+ ++       +   +  
Sbjct: 97  SFDVRVESTLKQLLS---QRRANPSSSVSTMVQTPGVSHG 133



>gi|19074594|ref|NP_586100.1|   MADS domain [Encephalitozoon cuniculi]
 gi|19069236|emb|CAD25704.1|   MADS domain [Encephalitozoon cuniculi]
          Length = 776

 Score = 80.2 bits (197), Expect = 4e-15
 Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 22/115 (19%)

Query: 10  QFPSASRSRIVNKIMETQLK--QLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQI 67
                 R +++ K+     +    P   P    E    A+R E++++  + ++ EYLR +
Sbjct: 1   MLSQEERKQMILKLFVALKESNIFPGYTPVQIKEA---AIRAEQRIYEESGSKEEYLRGM 57

Query: 68  CMKMLNMET------------KSQNAAGSSSADDNTP-----PLVPEPSVPNNEP 105
             +   +E             KS      S                EP     + 
Sbjct: 58  DERFQRIERVVSNRSRADGRGKSTQEQMGSYEHARPQFQGFRNGSEEPQDSTKQG 112



>gi|27260984|dbj|BAC45101.1|   OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)]
          Length = 414

 Score = 80.2 bits (197), Expect = 5e-15
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 6  DWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLR 65
          DWRT+     R R+   I+ +   +L         +L+K+A R EE+++  A +  +YLR
Sbjct: 12 DWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDFGDYLR 71

Query: 66 QICM 69
          +I +
Sbjct: 72 RISL 75



>gi|7493813|pir||T18235   transcription activator GAL11 homolog - yeast (Candida albicans)
 gi|3859719|emb|CAA21993.1|   possible regulatory protein [Candida albicans]
          Length = 1145

 Score = 79.4 bits (195), Expect = 9e-15
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 7   WRTQFPSASRSRIVNKIMETQLKQLPFIRPE-GTNELRKIAVRFEEKLFNNASNQTEYLR 65
           WR  +    R ++V  I+ T  + L    P      L K+A  FE+ ++  ++++ +YLR
Sbjct: 23  WRAMYSGEERQKVVQIIINTLTE-LHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLR 81

Query: 66  QICMKMLNMETKSQNAAGSSSADDNT 91
            I MK+  +  + Q  A +     N 
Sbjct: 82  AIKMKVHQLRVQKQQIAANQGGQINP 107



>gi|25518480|pir||D86302   hypothetical protein F17F16.9 - Arabidopsis thaliana
 gi|9954735|gb|AAG09088.1|AC026237_9   Hypothetical protein [Arabidopsis thaliana]
          Length = 238

 Score = 79.0 bits (194), Expect = 1e-14
 Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 4/93 (4%)

Query: 15  SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR--QICMKM 71
            R  + + I     K+ P    + +  +    A R EE LF  A  + EYL    +  ++
Sbjct: 8   IRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESRL 67

Query: 72  LNMETKSQNAAGSSSADDNTPPLVPE-PSVPNN 103
            ++    Q         D++       P+   +
Sbjct: 68  TSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100



>gi|21105779|gb|AAM34787.1|AF512558_1   HAC5 [Arabidopsis thaliana]
          Length = 453

 Score = 78.3 bits (192), Expect = 2e-14
 Identities = 13/100 (13%), Positives = 41/100 (41%), Gaps = 6/100 (6%)

Query: 9   TQFPSASRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYL--R 65
           +Q     R  ++N+      ++ P    + +  +L ++A R E  ++  A+++ +YL  R
Sbjct: 6   SQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDFR 65

Query: 66  QICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEP 105
              +++ +   +  +      A+ ++       +   +  
Sbjct: 66  SFDVRVESTLKQLLS---QRRANPSSSVSTMVQTPGVSHG 102



>gi|18394390|ref|NP_564004.1|   expressed protein [Arabidopsis thaliana]
 gi|21618240|gb|AAM67290.1|   unknown [Arabidopsis thaliana]
          Length = 128

 Score = 69.4 bits (169), Expect = 8e-12
 Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 4/93 (4%)

Query: 15  SRSRIVNKIMETQLKQLPFIRPEGTN-ELRKIAVRFEEKLFNNASNQTEYLR--QICMKM 71
            R  + + I     K+ P    + +  +    A R EE LF  A  + EYL    +  ++
Sbjct: 8   IRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESRL 67

Query: 72  LNMETKSQNAAGSSSADDNTPPLVPE-PSVPNN 103
            ++    Q         D++       P+   +
Sbjct: 68  TSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100



>gi|23127315|ref|ZP_00109188.1|   hypothetical protein [Nostoc punctiforme]
          Length = 469

 Score = 66.3 bits (161), Expect = 7e-11
 Identities = 10/71 (14%), Positives = 23/71 (32%), Gaps = 2/71 (2%)

Query: 34  IRPEGTNELRK-IAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92
                   + + I +   +++F  A +Q+E LR    +   +           +A +   
Sbjct: 176 TWQYTLKAITRTIVLSLPQEVFERAIDQSEALRTHVEQ-FRVRLSQPQTPQGEAAIELAA 234

Query: 93  PLVPEPSVPNN 103
               E  +P  
Sbjct: 235 NHPQEAELPGT 245



>gi|15226772|ref|NP_178842.1|   hypothetical protein [Arabidopsis thaliana]
 gi|25411357|pir||E84491   hypothetical protein At2g10440 [imported] - Arabidopsis thaliana
 gi|4733973|gb|AAD28655.1|   hypothetical protein [Arabidopsis thaliana]
          Length = 935

 Score = 65.6 bits (159), Expect = 1e-10
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 2  DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61
          +   DWR+Q     R ++++KI+E   ++         N+   IA +FEE  ++ A+++T
Sbjct: 20 NNRIDWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---IASKFEENFYSIATDKT 76



>gi|27260985|dbj|BAC45102.1|   OJ1705_C03.24 [Oryza sativa (japonica cultivar-group)]
          Length = 87

 Score = 46.3 bits (109), Expect = 7e-05
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 20 VNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASN 59
          + + M     +L         +L+K+A R EE+++  A +
Sbjct: 35 IGQTMPILQMKLQTTTSTTLIDLQKVAARIEERIYKIAID 74



>gi|25148761|ref|NP_741151.1|   Putative nuclear protein, nematode specific [Caenorhabditis
           elegans]
 gi|21450526|gb|AAM54164.1|U00066_6   Hypothetical protein R12B2.5b [Caenorhabditis elegans]
          Length = 777

 Score = 38.6 bits (89), Expect = 0.017
 Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 19/128 (14%)

Query: 6   DWRTQFPSASRSRIVNKIMETQ------LKQLPFIRPEGTNELRKIAVRFEEKLFNNASN 59
           DW +      R  ++ ++             LP             A + EE +F    +
Sbjct: 5   DWPS---PKFREHVIQRLEPELARNRQNAPNLPVPGD---------ARQVEEYVFAKCMS 52

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQD 119
           + EY+R I   +  +   S++AA  S    +     P  +  N       G +R   P D
Sbjct: 53  KDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTAGNTPAGGTPG-YRAPVPPD 111

Query: 120 SRQKNINA 127
            +  +  A
Sbjct: 112 PQPTSAQA 119



>gi|4104919|gb|AAD13337.1|   poly(A) binding protein I [Trypanosoma brucei]
          Length = 555

 Score = 38.2 bits (88), Expect = 0.022
 Identities = 8/63 (12%), Positives = 13/63 (20%), Gaps = 4/63 (6%)

Query: 73  NMETKSQNAAGSSSADDNTPPLVPEPSVPNNEPA----VNTGDWRTQQPQDSRQKNINAL 128
                 Q     S            P  P  +      V       QQ     ++  N +
Sbjct: 446 RARPGPQRPPMQSMMAPQQQSHPQIPQPPVAQGQNLSTVLASMTPDQQKNVLGERLYNYI 505

Query: 129 LDT 131
           +  
Sbjct: 506 VRN 508



>gi|22329083|ref|NP_680756.1|   expressed protein [Arabidopsis thaliana]
 gi|28392894|gb|AAO41883.1|   unknown protein [Arabidopsis thaliana]
 gi|28827750|gb|AAO50719.1|   unknown protein [Arabidopsis thaliana]
          Length = 238

 Score = 37.8 bits (87), Expect = 0.029
 Identities = 11/67 (16%), Positives = 27/67 (40%), Gaps = 9/67 (13%)

Query: 4  TGDWRTQFPSASRSRIVNKIMETQLK------QLPFIRPEGTNELRKIAVRFEEKLFNNA 57
             W +      R  ++ +I     +      +      E   +L  + +R EE +++ A
Sbjct: 13 RRAWHSDRHQPMRGLLIQEIFRIVCEIHSQSTRKNTEWQE---KLPVVVLRAEEIMYSKA 69

Query: 58 SNQTEYL 64
          +++ EY+
Sbjct: 70 NSEAEYM 76



>gi|15230072|ref|NP_189057.1|   expressed protein [Arabidopsis thaliana]
          Length = 343

 Score = 37.4 bits (86), Expect = 0.034
 Identities = 10/61 (16%), Positives = 25/61 (40%), Gaps = 5/61 (8%)

Query: 7  WRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRK----IAVRFEEKLFNNASNQTE 62
          W +      R  I+ +I      +          E ++    + ++ EE +++ A+++ E
Sbjct: 16 WHSDRHQPIRGSIIRQIFR-LAMEAHSAATRKNKEWQEKLPVVVLKAEEIMYSKANSEEE 74

Query: 63 Y 63
          Y
Sbjct: 75 Y 75



>gi|17549180|ref|NP_522520.1|   PROBABLE SIGMA-54 INTERACTING TRANSCRIPTION REGULATOR PROTEIN
           [Ralstonia solanacearum]
 gi|17431432|emb|CAD18110.1|   PROBABLE SIGMA-54 INTERACTING TRANSCRIPTION REGULATOR PROTEIN
           [Ralstonia solanacearum]
          Length = 510

 Score = 37.1 bits (85), Expect = 0.045
 Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 8/68 (11%)

Query: 33  FIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETKSQNAAGSSSADDNTP 92
           +  P    EL  +  R   K+ +  +++ +        ++ +ET   +    + A  +  
Sbjct: 396 YPWPGNVRELEHVVSRAALKMLSRGASRDD--------IVTLETGLLDLDAQAVAPPSPA 447

Query: 93  PLVPEPSV 100
            L PE S 
Sbjct: 448 GLPPEASP 455



>gi|25148756|ref|NP_741152.1|   Putative nuclear protein, nematode specific [Caenorhabditis
           elegans]
 gi|21363104|sp|Q21955|YNL5_CAEEL   Hypothetical protein R12B2.5 in chromosome III
 gi|17976542|gb|AAA50743.3|   Hypothetical protein R12B2.5a [Caenorhabditis elegans]
          Length = 780

 Score = 35.9 bits (82), Expect = 0.10
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 20/130 (15%)

Query: 6   DWRTQFPSASRSRIVNKIMETQ------LKQLPFIRPEGTNELRKIAVRFEEKLFNNASN 59
           DW +      R  ++ ++             LP             A + EE +F    +
Sbjct: 5   DWPS---PKFREHVIQRLEPELARNRQNAPNLPVPGD---------ARQVEEYVFAKCMS 52

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVP--NNEPAVNTGDWRTQQP 117
           + EY+R I   +  +   S++AA  S    +     P  +     N PA  T  +R   P
Sbjct: 53  KDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTAALLGNTPAGGTPGYRAPVP 112

Query: 118 QDSRQKNINA 127
            D +  +  A
Sbjct: 113 PDPQPTSAQA 122



>gi|20149720|ref|NP_619589.1|   oxidized low density lipoprotein (lectin-like) receptor 1; oxidised
           low density lipoprotein (lectin-like) receptor 1 [Mus
           musculus]
 gi|12006986|gb|AAG44998.1|AF303744_1   oxidized LDL receptor [Mus musculus]
          Length = 363

 Score = 35.5 bits (81), Expect = 0.13
 Identities = 21/144 (14%), Positives = 47/144 (32%), Gaps = 17/144 (11%)

Query: 12  PSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKM 71
              S+  +  KI +T  ++L     E   EL +     +E L   A++  E  R++  K+
Sbjct: 94  SQESKKELKGKI-DTLTQKLNEKSKEQ-EELLQKNQNLQEALQRAANSSEESQRELKGKI 151

Query: 72  LNMETKSQNAAGSSSA-----------DDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120
             +  K    +                         E      +  ++T   +  +    
Sbjct: 152 DTITRKLDEKSKEQEELLQMIQNLQEALQRAANSSEESQREL-KGKIDTLTLKLNEKSKE 210

Query: 121 RQKNINA---LLDTLKKIVPHSGK 141
           +++ +     L + L++    SG 
Sbjct: 211 QEELLQKNQNLQEALQRAANFSGP 234



>gi|15604738|ref|NP_219522.1|   Signal Peptidase I [Chlamydia trachomatis]
 gi|7469049|pir||G71565   probable signal peptidase I - Chlamydia trachomatis  (serotype D,
          strain UW3/Cx)
 gi|3328410|gb|AAC67610.1|   Signal Peptidase I [Chlamydia trachomatis]
          Length = 628

 Score = 35.1 bits (80), Expect = 0.21
 Identities = 9/69 (13%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 18 RIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMETK 77
          RI++              PE   EL+++  + EE + +   N+ +       +   ++ +
Sbjct: 17 RILHSSFRLLKSTKMLSHPETQKELQEVLKQLEEAILD--QNREDA-SLFAKQAQAIQKR 73

Query: 78 SQNAAGSSS 86
             +   ++
Sbjct: 74 FPKSKLRAT 82



>gi|27260988|dbj|BAC45105.1|   OJ1705_C03.27 [Oryza sativa (japonica cultivar-group)]
          Length = 194

 Score = 34.8 bits (79), Expect = 0.22
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 6  DWRTQFPSASRSRIVNKIMETQLK 29
          DWRT+     R R+ + I++    
Sbjct: 12 DWRTRLGQDIRDRVTHDILQASTP 35



>gi|28871928|ref|NP_794547.1|   lipoprotein, putative [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28855181|gb|AAO58242.1|   lipoprotein, putative [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 201

 Score = 34.8 bits (79), Expect = 0.22
 Identities = 9/46 (19%), Positives = 19/46 (41%), Gaps = 3/46 (6%)

Query: 16  RSRIVNKIMETQLKQLPFIRPEGTNELRKIA---VRFEEKLFNNAS 58
           R  + N +++  + +L  + P   +EL+  A    + E      A 
Sbjct: 139 RQEMRNDLIQKLMARLQQLTPSRLDELQAKADAVAKAEADALEAAQ 184



>gi|7513707|pir||JE0111   lectin-like oxidized LDL receptor - mouse
          Length = 363

 Score = 34.8 bits (79), Expect = 0.26
 Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 17/144 (11%)

Query: 12  PSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKM 71
              S+  +  KI +T  ++L     E   EL +     +E L   A++  E  R++  K+
Sbjct: 94  SQESKKELKGKI-DTLTQKLNEKSKEQ-EELLQKNQNLQEALQRAANSSEESQRELKGKI 151

Query: 72  LNMETKSQNAAGSSSA-----------DDNTPPLVPEPSVPNNEPAVNTGDWRTQQPQDS 120
             +  K    +                         E      +  ++T   +  +    
Sbjct: 152 DTITRKLDEKSKEQEELLQMIQNLQEALQRAANSSEESQFEL-KGKIDTLTLKLNEKSKE 210

Query: 121 RQKNINA---LLDTLKKIVPHSGK 141
           + + +     L + L++    SG 
Sbjct: 211 QFELLQKNQNLQEALQRAANFSGP 234



>gi|19112182|ref|NP_595390.1|   putative transcriptional regulatory protein [Schizosaccharomyces
           pombe]
 gi|7573208|emb|CAB87377.1|   SPBP35G2.15 [Schizosaccharomyces pombe]
          Length = 653

 Score = 34.0 bits (77), Expect = 0.40
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 42  LRKIAVRFEEKLFNNASNQTEYLRQICMKMLNMET------KSQNAAGSSSADDNTPPLV 95
           L  +A+ FE + F+ AS++ EYL     K   +        ++       S  +N   + 
Sbjct: 41  LMNMALSFERQAFDGASSKNEYLTTCGKKTAQLRDQIRDTLQATQMKQMPSVYNNAGNVG 100

Query: 96  PEPSVPNNEPAVNT-GDWRTQQPQDSRQKNINALLDTLK 133
             P+   N  A N     R Q      Q  +      +K
Sbjct: 101 ALPTAGPNRLANNPRVMPRLQNQNVPMQAGMQQFARNMK 139



>gi|7506661|pir||T16726   hypothetical protein R12B2.5 - Caenorhabditis elegans
          Length = 760

 Score = 33.6 bits (76), Expect = 0.51
 Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 22/121 (18%)

Query: 6   DWRTQFPSASRSRIVNKIMETQ------LKQLPFIRPEGTNELRKIAVRFEEKLFNNASN 59
           DW +      R  ++ ++             LP             A + EE +F    +
Sbjct: 5   DWPS---PKFREHVIQRLEPELARNRQNAPNLPVPGD---------ARQVEEYVFAKCMS 52

Query: 60  QTEYLRQICMKMLNMETKSQNAAGSSSADD----NTPPLVPEPSVPNNEPAVNTGDWRTQ 115
           + EY+R I   +  +   S++AA  S        + P    +P   + +         T 
Sbjct: 53  KDEYMRTIAKVINAINCNSKSAAVPSVLQPSQFHSPPCTTADPQPTSAQARNPPVTVATT 112

Query: 116 Q 116
           Q
Sbjct: 113 Q 113



>gi|7494984|pir||T25469   hypothetical protein B0507.8 - Caenorhabditis elegans
          Length = 772

 Score = 33.2 bits (75), Expect = 0.72
 Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 8/67 (11%)

Query: 15  SRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYLRQICMKMLNM 74
            R  + NKI E         R     +  +  ++  + +     NQ E L+++  K +  
Sbjct: 505 IRQEMCNKIREE--------RNAEQKKFNEEVLKLNQGIHEIKINQEEKLQKMDEKRIEE 556

Query: 75  ETKSQNA 81
           + K    
Sbjct: 557 QKKRLEK 563






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Jun 26, 2003  1:47 AM
  Number of letters in database: 468,778,868
  Number of sequences in database:  1,459,938
  
Lambda     K      H
   0.317    0.164    0.428 

Gapped
Lambda     K      H
   0.267   0.0503    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,937,976
Number of Sequences: 1459938
Number of extensions: 5674152
Number of successful extensions: 42713
Number of sequences better than  1.0: 100
Number of HSP's better than  1.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 40370
Number of HSP's gapped (non-prelim): 1515
length of query: 145
length of database: 468,778,868
effective HSP length: 121
effective length of query: 24
effective length of database: 292,126,370
effective search space: 7011032880
effective search space used: 7011032880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)