BLASTP 2.2.6 [Apr-09-2003]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1057144920-023190-2203

Query= Ca_Gal11
         (138 letters)


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF 
           1,463,011 sequences; 469,658,079 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs



Results of PSI-Blast iteration 6

Skip to the first new sequence

Legend:
 - means that the alignment score was below the threshold on the previous iteration 
 - means that the alignment was checked on the previous iteration 


Hit list size 
Sequences with E-value BETTER than threshold
Related Structures
                                                                     Score    E
Sequences producing significant alignments:                          (bits) Value


 gi|31753089|gb|AAH53889.1|  Unknown (protein for IMAGE:6151364) [...   145   1e-34 

 gi|27666550|ref|XP_235770.1|  similar to E1A-associated protein p...   145   2e-34 

 gi|24461867|gb|AAN62354.1|AF506028_23  CTV.22 [Poncirus trifoliata]    142   1e-33 

 gi|4557557|ref|NP_001420.1|  E1A binding protein p300; E1A-bindin...   140   3e-33 

 gi|27663074|ref|XP_235502.1|  similar to E1A-associated protein p...   137   2e-32 

 gi|28486616|ref|XP_283295.1|  similar to E1A-associated protein p...   136   5e-32 

 gi|15218294|ref|NP_173030.1|  expressed protein [Arabidopsis thal...   136   7e-32 

 gi|2133462|pir||S60123  hypothetical protein R10E11.1 - Caenorhab...   133   5e-31 

 gi|7493813|pir||T18235  transcription activator GAL11 homolog - y...   133   6e-31 

 gi|17552708|ref|NP_499161.1|  CBP/p300 homolog CBP-1 (cbp-1) [Cae...   132   8e-31 

 gi|17552710|ref|NP_499160.1|  CBP/p300 homolog CBP-1 (cbp-1) [Cae...   132   8e-31 

 gi|4758056|ref|NP_004371.1|  CREB binding protein [Homo sapiens] ...   131   2e-30 

 gi|4321116|gb|AAC51331.2|  CREB-binding protein [Homo sapiens]         131   2e-30 

 gi|21307831|gb|AAL54859.1|  CREB-binding protein [Aplysia califor...   130   3e-30 

 gi|631119|pir||S39162  transcription coactivator CREB-binding pro...   130   4e-30 

 gi|24461860|gb|AAN62347.1|AF506028_14  CTV.20 [Poncirus trifoliata]    127   4e-29 

 gi|482238|pir||S41033  hypothetical protein K03H1.10 - Caenorhabd...   125   9e-29 

 gi|1345703|sp|P45481|CBP_MOUSE  CREB-binding protein >gi|481698|p...   125   1e-28 

 gi|737920|prf||1923401A  protein CBP                                   125   1e-28 

 gi|19547885|gb|AAL87531.1|  CREB-binding protein [Mus musculus] >...   125   1e-28 

 gi|17554044|ref|NP_499201.1|  TAZ zinc finger and KIX domain cont...   124   2e-28 

 gi|2996629|gb|AAC08447.1|  CBP [Homo sapiens]                          121   2e-27 

 gi|25511635|pir||B86292  F7H2.12 protein - Arabidopsis thaliana >...   121   2e-27 

 gi|547239|gb|AAB31182.1|  p300=transcription coactivator {N-termi...   120   4e-27 

 gi|22329593|ref|NP_173031.2|  expressed protein [Arabidopsis thal...   120   4e-27 

 gi|27881767|gb|AAH44677.1|  Similar to CREB binding protein (Rubi...   116   5e-26 

 gi|4139873|pdb|1KDX|A  Chain A, Kix Domain Of Mouse Cbp (Creb Bin...   114   2e-25 

 gi|28071313|dbj|BAC56002.1|  P0705A05.20 [Oryza sativa (japonica ...   111   2e-24 

 gi|27260984|dbj|BAC45101.1|  OJ1705_C03.23 [Oryza sativa (japonic...   108   1e-23 

 gi|7511830|pir||T13828  CREB-binding protein homolog - fruit fly ...   108   2e-23 

 gi|31204369|ref|XP_311133.1|  ENSANGP00000004748 [Anopheles gambi...   107   3e-23 

 gi|24640865|ref|NP_524642.2|  nejire CG15319-PB [Drosophila melan...   106   7e-23 

 gi|15226772|ref|NP_178842.1|  hypothetical protein [Arabidopsis t...    68   3e-11 

 gi|17508323|ref|NP_493339.1|  KIX domain containing protein famil...    54   5e-07 

 gi|27260985|dbj|BAC45102.1|  OJ1705_C03.24 [Oryza sativa (japonic...    54   5e-07 

 gi|27260988|dbj|BAC45105.1|  OJ1705_C03.27 [Oryza sativa (japonic...    49   1e-05 

 gi|19074594|ref|NP_586100.1|  MADS domain [Encephalitozoon cunicu...    44   4e-04 


Alignments








>gi|31753089|gb|AAH53889.1|   Unknown (protein for IMAGE:6151364) [Homo sapiens]
          Length = 1553

 Score =  145 bits (366), Expect = 1e-34
 Identities = 22/147 (14%), Positives = 52/147 (35%), Gaps = 23/147 (15%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 568 RKQWHEDITQDLRNHLVHKLV---QAIFPTPDPAALKDRRMENLVAYARKVEGDMYESAN 624

Query: 62  SKEDYLRAIKMKVHQLRV----------QKQQIAANQGGQIN----PQQRQQQQQQQISN 107
           ++ +Y   +  K+++++           QKQ +  N  G +     P     Q Q  +++
Sbjct: 625 NRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQPGMTS 684

Query: 108 SNSMNPVNAQNVQFLRQQAQARSQSQA 134
           +    P  +     +  Q   R   Q+
Sbjct: 685 NGP-LPDPSMIRGSVPNQMMPRITPQS 710



>gi|27666550|ref|XP_235770.1|   similar to E1A-associated protein p300 [Rattus norvegicus]
          Length = 1605

 Score =  145 bits (365), Expect = 2e-34
 Identities = 21/158 (13%), Positives = 49/158 (31%), Gaps = 34/158 (21%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 197 RKQWHEDITQDLRNHLVHKLV---QAIFPTPDPAALKDRRMENLVAYARKVEGDMYESAN 253

Query: 62  SKEDYLRAIKMKVHQLRV----------QKQQIAANQGGQIN-PQQRQQQQQQQISNSNS 110
           ++ +Y   +  K+++++           QKQ +  +  G +  P        QQ +   +
Sbjct: 254 NRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPSAPGMVPVPMNTAPNMGQQPTGMTT 313

Query: 111 ---------------MNPVNAQNVQFLRQQAQARSQSQ 133
                            P  +     +  Q   R   Q
Sbjct: 314 KTKGYLTISVSTPDGPLPDPSMIRGSVPNQMMPRMTPQ 351



>gi|24461867|gb|AAN62354.1|AF506028_23   CTV.22 [Poncirus trifoliata]
          Length = 1405

 Score =  142 bits (358), Expect = 1e-33
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 6/129 (4%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDY 66
              WR     + RQ++V  I++TL      +    +  L K+A  FE+ +Y  ++S+ DY
Sbjct: 34  TGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDY 93

Query: 67  LRAIKMKVHQLRVQKQQIAANQGGQINPQQRQQ-----QQQQQISNSNSMNPVN-AQNVQ 120
           LR I +K+  +  + Q    N     NP    +       Q Q+ N     P+  + N  
Sbjct: 94  LRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPGSMQNQVHNQGQSLPIPLSANQS 153

Query: 121 FLRQQAQAR 129
            +RQQ  ++
Sbjct: 154 QVRQQLLSQ 162



>gi|4557557|ref|NP_001420.1|   E1A binding protein p300; E1A-binding protein, 300kD [Homo sapiens]
 gi|3024341|sp|Q09472|P300_HUMAN   E1A-associated protein p300
 gi|627657|pir||A54277   transcription adaptor protein p300 - human
 gi|495301|gb|AAA18639.1|   p300 protein
          Length = 2414

 Score =  140 bits (354), Expect = 3e-33
 Identities = 22/147 (14%), Positives = 52/147 (35%), Gaps = 23/147 (15%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 568 RKQWHEDITQDLRNHLVHKLV---QAIFPTPDPAALKDRRMENLVAYARKVEGDMYESAN 624

Query: 62  SKEDYLRAIKMKVHQLRV----------QKQQIAANQGGQIN----PQQRQQQQQQQISN 107
           ++ +Y   +  K+++++           QKQ +  N  G +     P     Q Q  +++
Sbjct: 625 NRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAAGMVPVSMNPGPNMGQPQPGMTS 684

Query: 108 SNSMNPVNAQNVQFLRQQAQARSQSQA 134
           +    P  +     +  Q   R   Q+
Sbjct: 685 NG-PLPDPSMIRGSVPNQMMPRITPQS 710



>gi|27663074|ref|XP_235502.1|   similar to E1A-associated protein p300 [Rattus norvegicus]
          Length = 2156

 Score =  137 bits (346), Expect = 2e-32
 Identities = 21/158 (13%), Positives = 49/158 (31%), Gaps = 34/158 (21%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 197 RKQWHEDITQDLRNHLVHKLV---QAIFPTPDPAALKDRRMENLVAYARKVEGDMYESAN 253

Query: 62  SKEDYLRAIKMKVHQLRV----------QKQQIAANQGGQIN-PQQRQQQQQQQISNSNS 110
           ++ +Y   +  K+++++           QKQ +  +  G +  P        QQ +   +
Sbjct: 254 NRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPSAPGMVPVPMNTAPNMGQQPTGMTT 313

Query: 111 ---------------MNPVNAQNVQFLRQQAQARSQSQ 133
                            P  +     +  Q   R   Q
Sbjct: 314 KTKGYLTISVSTPDGPLPDPSMIRGSVPNQMMPRMTPQ 351



>gi|28486616|ref|XP_283295.1|   similar to E1A-associated protein p300 [Mus musculus]
 gi|29244384|ref|NP_808489.1|   hypothetical protein A730011L11 [Mus musculus]
 gi|26335221|dbj|BAC31311.1|   unnamed protein product [Mus musculus]
          Length = 714

 Score =  136 bits (344), Expect = 5e-32
 Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 21/145 (14%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 569 RKQWHEDITQDLRNHLVHKLV---QAIFPTPDPAALKDRRMENLVAYARKVEGDMYESAN 625

Query: 62  SKEDYLRAIKMKVHQLRV----------QKQQIAANQGGQIN-PQQRQQQQQQQISNSNS 110
           ++ +Y   +  K+++++           QKQ +  N  G    P        QQ +   +
Sbjct: 626 NRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAPGMGPVPMNTGSNMGQQPTGMTT 685

Query: 111 MNPV--NAQNVQFLRQQAQARSQSQ 133
             PV   +     +      R   Q
Sbjct: 686 NGPVPDPSMIRGSVPNHMMPRMTPQ 710



>gi|15218294|ref|NP_173030.1|   expressed protein [Arabidopsis thaliana]
          Length = 1335

 Score =  136 bits (342), Expect = 7e-32
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 2/119 (1%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDY 66
              WR     + RQK+V  I+ TL +    +    +  L ++A  FE+ ++  + ++ DY
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQTDY 78

Query: 67  LRAIKMKVHQLRVQKQQIAANQGGQINPQQRQQQQQQQISNSNSMNPVN-AQNVQFLRQ 124
           LR I MK+  +  + Q  A +    I             +N   + P + + N     Q
Sbjct: 79  LRKISMKMLTMETKSQNAAGSSAA-IPAANNGTSIDSIPTNQGQLLPGSLSTNQSQAPQ 136



>gi|2133462|pir||S60123   hypothetical protein R10E11.1 - Caenorhabditis elegans
          Length = 2027

 Score =  133 bits (335), Expect = 5e-31
 Identities = 20/157 (12%), Positives = 47/157 (29%), Gaps = 28/157 (17%)

Query: 5   NPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQ-----RLSKMAQDFEKLVYER 59
           +    W    + + R  +V  ++     +        +       L   A+  EK ++E 
Sbjct: 593 DCTKEWHHQVTKDLRNHLVGKLV---KAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFES 649

Query: 60  SASKEDYLRAIKMKVHQLRVQ---------KQQIAANQGGQINPQQRQQQQ------QQQ 104
           +  +E+Y   +  K+++++ +          Q  AA+    I P     Q       +  
Sbjct: 650 ANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQMLGVEGGRSD 709

Query: 105 ISNSNSMNPVNAQNVQF----LRQ-QAQARSQSQAQI 136
           + +  S   V                   +     Q+
Sbjct: 710 VHSEGSSMAVAPSQQNQPWGGAPNSNMHQQIPPNGQV 746



>gi|7493813|pir||T18235   transcription activator GAL11 homolog - yeast (Candida albicans)
 gi|3859719|emb|CAA21993.1|   possible regulatory protein [Candida albicans]
          Length = 1145

 Score =  133 bits (334), Expect = 6e-31
 Identities = 122/122 (100%), Positives = 122/122 (100%)

Query: 1   GGGSNPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERS 60
           GGGSNPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERS
Sbjct: 14  GGGSNPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERS 73

Query: 61  ASKEDYLRAIKMKVHQLRVQKQQIAANQGGQINPQQRQQQQQQQISNSNSMNPVNAQNVQ 120
           ASKEDYLRAIKMKVHQLRVQKQQIAANQGGQINPQQRQQQQQQQISNSNSMNPVNAQNVQ
Sbjct: 74  ASKEDYLRAIKMKVHQLRVQKQQIAANQGGQINPQQRQQQQQQQISNSNSMNPVNAQNVQ 133

Query: 121 FL 122
           FL
Sbjct: 134 FL 135



>gi|17552708|ref|NP_499161.1|   CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans]
 gi|14530537|emb|CAA82353.2|   C. elegans CBP-1 protein (corresponding sequence R10E11.1a)
           [Caenorhabditis elegans]
          Length = 2045

 Score =  132 bits (333), Expect = 8e-31
 Identities = 20/157 (12%), Positives = 47/157 (29%), Gaps = 28/157 (17%)

Query: 5   NPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQ-----RLSKMAQDFEKLVYER 59
           +    W    + + R  +V  ++     +        +       L   A+  EK ++E 
Sbjct: 582 DCTKEWHHQVTKDLRNHLVGKLV---KAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFES 638

Query: 60  SASKEDYLRAIKMKVHQLRVQ---------KQQIAANQGGQINPQQRQQQQ------QQQ 104
           +  +E+Y   +  K+++++ +          Q  AA+    I P     Q       +  
Sbjct: 639 ANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQMLGVEGGRSD 698

Query: 105 ISNSNSMNPVNAQNVQF----LRQ-QAQARSQSQAQI 136
           + +  S   V                   +     Q+
Sbjct: 699 VHSEGSSMAVAPSQQNQPWGGAPNSNMHQQIPPNGQV 735



>gi|17552710|ref|NP_499160.1|   CBP/p300 homolog CBP-1 (cbp-1) [Caenorhabditis elegans]
 gi|20455476|sp|P34545|CBP1_CAEEL   Protein cbp-1
 gi|25299632|pir||G88564   protein R10E11.1 [imported] - Caenorhabditis elegans
 gi|17645979|emb|CAD18875.1|   C. elegans CBP-1 protein (corresponding sequence R10E11.1b)
           [Caenorhabditis elegans]
          Length = 2056

 Score =  132 bits (333), Expect = 8e-31
 Identities = 20/157 (12%), Positives = 47/157 (29%), Gaps = 28/157 (17%)

Query: 5   NPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQ-----RLSKMAQDFEKLVYER 59
           +    W    + + R  +V  ++     +        +       L   A+  EK ++E 
Sbjct: 593 DCTKEWHHQVTKDLRNHLVGKLV---KAIFPEPNQEAMNDNRLKDLIAYARKVEKEMFES 649

Query: 60  SASKEDYLRAIKMKVHQLRVQ---------KQQIAANQGGQINPQQRQQQQ------QQQ 104
           +  +E+Y   +  K+++++ +          Q  AA+    I P     Q       +  
Sbjct: 650 ANDREEYYHLLAEKIYKIQKELQEKKNSRLNQGAAAHDQYAIPPSNELAQMLGVEGGRSD 709

Query: 105 ISNSNSMNPVNAQNVQF----LRQ-QAQARSQSQAQI 136
           + +  S   V                   +     Q+
Sbjct: 710 VHSEGSSMAVAPSQQNQPWGGAPNSNMHQQIPPNGQV 746



>gi|4758056|ref|NP_004371.1|   CREB binding protein [Homo sapiens]
 gi|3023440|sp|Q92793|CBP_HUMAN   CREB-binding protein
 gi|2443859|gb|AAC51770.1|   CREB-binding protein
          Length = 2442

 Score =  131 bits (329), Expect = 2e-30
 Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 22/149 (14%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 589 RKGWHEHVTQDLRSHLVHKLV---QAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 645

Query: 62  SKEDYLRAIKMKVHQLRVQ----------KQQIAANQGGQINPQQRQQQQQQ----QISN 107
           S+++Y   +  K+++++ +          KQ I  NQ     P  +     Q    +  N
Sbjct: 646 SRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPPN 705

Query: 108 SNSMNPVNAQNVQFLRQQAQARSQSQAQI 136
                PVN   V          S    Q+
Sbjct: 706 GPLSLPVNRMQVSQGMNSFNPMSLGNVQL 734



>gi|4321116|gb|AAC51331.2|   CREB-binding protein [Homo sapiens]
          Length = 2442

 Score =  131 bits (329), Expect = 2e-30
 Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 22/149 (14%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 589 RKGWHEHVTQDLRSHLVHKLV---QAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 645

Query: 62  SKEDYLRAIKMKVHQLRVQ----------KQQIAANQGGQINPQQRQQQQQQ----QISN 107
           S+++Y   +  K+++++ +          KQ I  NQ     P  +     Q    +  N
Sbjct: 646 SRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPPN 705

Query: 108 SNSMNPVNAQNVQFLRQQAQARSQSQAQI 136
                PVN   V          S    Q+
Sbjct: 706 GPLSLPVNRMQVSQGMNSFNPMSLGNVQL 734



>gi|21307831|gb|AAL54859.1|   CREB-binding protein [Aplysia californica]
          Length = 2245

 Score =  130 bits (328), Expect = 3e-30
 Identities = 20/121 (16%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W A  + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 502 RKDWHAQVTQDLRNHLVHKLV---QAIFPTPDQATLRDSRMKNLVAYARKVEGDMYESAN 558

Query: 62  SKEDYLRAIKMKVHQLRVQ-KQQIAANQGGQINPQQRQQQQQQQISNSNSMNPVNAQNVQ 120
           ++  Y   +  K+++++ + +++       Q  P  +    Q QI  +    P N Q   
Sbjct: 559 NRGQYYHLLAEKIYKIQKELEEKRIQRMKVQNAPNAQVPGMQGQIHPNAQNGPNNVQGNA 618

Query: 121 F 121
           F
Sbjct: 619 F 619



>gi|631119|pir||S39162   transcription coactivator CREB-binding protein - human
          Length = 2440

 Score =  130 bits (327), Expect = 4e-30
 Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 22/149 (14%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 589 RKGWHEHVTQDLRSHLVHKLV---QAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 645

Query: 62  SKEDYLRAIKMKVHQLRVQ----------KQQIAANQGGQINPQQRQQQQQQ----QISN 107
           S+++Y   +  K+++++ +          KQ I  NQ     P  +     Q    +  N
Sbjct: 646 SRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQSVRPPN 705

Query: 108 SNSMNPVNAQNVQFLRQQAQARSQSQAQI 136
                PVN   V          S    Q+
Sbjct: 706 GPLSLPVNRMQVSQGMNSFNPMSLGNVQL 734



>gi|24461860|gb|AAN62347.1|AF506028_14   CTV.20 [Poncirus trifoliata]
          Length = 3148

 Score =  127 bits (319), Expect = 4e-29
 Identities = 21/79 (26%), Positives = 41/79 (51%)

Query: 9  SWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLR 68
           WR   S + RQ++V  I++TL      +    +  L ++A  FE+ ++  + S+ DYLR
Sbjct: 16 DWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPEGLNELKRIADRFEEKIFTSATSQSDYLR 75

Query: 69 AIKMKVHQLRVQKQQIAAN 87
           I +K+  +  + Q  + +
Sbjct: 76 KISLKMLSMESRSQNASGS 94



>gi|482238|pir||S41033   hypothetical protein K03H1.10 - Caenorhabditis elegans  (fragment)
          Length = 316

 Score =  125 bits (315), Expect = 9e-29
 Identities = 19/127 (14%), Positives = 49/127 (38%), Gaps = 13/127 (10%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFN---VQRLSKMAQDFEKLVYERSASK 63
              W    + + R  +V  ++     +  +    N   ++ L+  A+  EK V+E +  +
Sbjct: 160 TKEWHRQVTNDLRNHIVGKLV---KAICPAPEMMNDIRLKDLNAYARKVEKEVFETAIDR 216

Query: 64  EDYLRAIKMKVHQLRVQKQQIAANQGGQINPQQ-----RQQQQQQQISN--SNSMNPVNA 116
           ++Y   +  K+++++ + Q+   ++  Q   Q       + +  +      +N     N 
Sbjct: 217 KNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDEFARMRIDEGGHQLRTNQETETNR 276

Query: 117 QNVQFLR 123
           QN     
Sbjct: 277 QNQSQQP 283



>gi|1345703|sp|P45481|CBP_MOUSE   CREB-binding protein
 gi|481698|pir||S39161   CREB-binding protein - mouse
 gi|435855|gb|AAB28651.1|   CREB-binding protein; CBP [Mus sp.]
          Length = 2441

 Score =  125 bits (315), Expect = 1e-28
 Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 22/149 (14%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 588 RKGWHEHVTQDLRSHLVHKLV---QAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 644

Query: 62  SKEDYLRAIKMKVHQLRVQ----------KQQIAANQGGQINPQQR----QQQQQQQISN 107
           S+++Y   +  K+++++ +          KQ I  NQ        +       Q  +  N
Sbjct: 645 SRDEYYHLLAEKIYKIQKELEEKRRTRLHKQGILGNQPALPASGAQPPVIPPAQSVRPPN 704

Query: 108 SNSMNPVNAQNVQFLRQQAQARSQSQAQI 136
                PVN   V          S    Q+
Sbjct: 705 GPLPLPVNRMQVSQGMNSFNPMSLGNVQL 733



>gi|737920|prf||1923401A   protein CBP
          Length = 2441

 Score =  125 bits (315), Expect = 1e-28
 Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 22/149 (14%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 588 RKGWHERVTQDLRSHLVHKLV---QAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 644

Query: 62  SKEDYLRAIKMKVHQLRVQ----------KQQIAANQGGQINPQQR----QQQQQQQISN 107
           S+++Y   +  K+++++ +          KQ I  NQ        +       Q  +  N
Sbjct: 645 SRDEYYHLLAEKIYKIQKELEEKRRTRLHKQGILGNQPALPASGAQPPVIPPAQSVRPPN 704

Query: 108 SNSMNPVNAQNVQFLRQQAQARSQSQAQI 136
                PVN   V          S    Q+
Sbjct: 705 GPLPLPVNRMQVSQGMNSFNPMSLGNVQL 733



>gi|19547885|gb|AAL87531.1|   CREB-binding protein [Mus musculus]
 gi|19547887|gb|AAL87532.1|   CREB-binding protein [Mus musculus]
          Length = 2429

 Score =  125 bits (315), Expect = 1e-28
 Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 22/149 (14%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 582 RKGWHEHVTQDLRSHLVHKLV---QAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 638

Query: 62  SKEDYLRAIKMKVHQLRVQ----------KQQIAANQGGQINPQQR----QQQQQQQISN 107
           S+++Y   +  K+++++ +          KQ I  NQ        +       Q  +  N
Sbjct: 639 SRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPASGAQPPVIPPAQSVRPPN 698

Query: 108 SNSMNPVNAQNVQFLRQQAQARSQSQAQI 136
                PVN   V          S    Q+
Sbjct: 699 GPLPLPVNRMQVSQGMNSFNPMSLGNVQL 727



>gi|17554044|ref|NP_499201.1|   TAZ zinc finger and KIX domain containing protein family member
           (36.7 kD) [Caenorhabditis elegans]
 gi|25395947|pir||D88569   protein K03H1.10 [imported] - Caenorhabditis elegans
 gi|3877003|emb|CAA82940.1|   Hypothetical protein K03H1.10 [Caenorhabditis elegans]
 gi|3878179|emb|CAA82665.1|   Hypothetical protein K03H1.10 [Caenorhabditis elegans]
          Length = 322

 Score =  124 bits (312), Expect = 2e-28
 Identities = 19/127 (14%), Positives = 49/127 (38%), Gaps = 13/127 (10%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFN---VQRLSKMAQDFEKLVYERSASK 63
              W    + + R  +V  ++     +  +    N   ++ L+  A+  EK V+E +  +
Sbjct: 166 TKEWHRQVTNDLRNHIVGKLV---KAICPAPEMMNDIRLKDLNAYARKVEKEVFETAIDR 222

Query: 64  EDYLRAIKMKVHQLRVQKQQIAANQGGQINPQQ-----RQQQQQQQISN--SNSMNPVNA 116
           ++Y   +  K+++++ + Q+   ++  Q   Q       + +  +      +N     N 
Sbjct: 223 KNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLDEFARMRIDEGGHQLRTNQETETNR 282

Query: 117 QNVQFLR 123
           QN     
Sbjct: 283 QNQSQQP 289



>gi|2996629|gb|AAC08447.1|   CBP [Homo sapiens]
          Length = 555

 Score =  121 bits (303), Expect = 2e-27
 Identities = 25/149 (16%), Positives = 50/149 (33%), Gaps = 22/149 (14%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 323 RKGWHEHVTQDLRSHLVHKLV---QAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 379

Query: 62  SKEDYLRAIKMKVHQLRVQ----------KQQIAANQGGQINPQQRQQQQQQ----QISN 107
           S+++Y   +  K+++++ +          KQ I  NQ     P  +     Q    +  N
Sbjct: 380 SRDEYYHLLAEKIYKIQKELEEKRRSRLHKQGILGNQPALPAPGAQPPVIPQAQPVRPPN 439

Query: 108 SNSMNPVNAQNVQFLRQQAQARSQSQAQI 136
                PVN   V          S    Q+
Sbjct: 440 GPLSLPVNRMQVSQGMNSFNPMSLGNVQL 468



>gi|25511635|pir||B86292   F7H2.12 protein - Arabidopsis thaliana
 gi|8927657|gb|AAF82148.1|AC034256_12   EST gb|N38213 comes from this gene. [Arabidopsis thaliana]
          Length = 1366

 Score =  121 bits (303), Expect = 2e-27
 Identities = 27/150 (18%), Positives = 49/150 (32%), Gaps = 33/150 (22%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERSASK--- 63
              WR     + RQK+V  I+ TL +    +    +  L ++A  FE+ ++  + ++   
Sbjct: 19  TGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRIAARFEEKIFSGALNQRFV 78

Query: 64  ----------------------------EDYLRAIKMKVHQLRVQKQQIAANQGGQINPQ 95
                                        DYLR I MK+  +  + Q  A +    I   
Sbjct: 79  RQWTPQHGKELTFGICKAKPQYVGYEIHTDYLRKISMKMLTMETKSQNAAGSSAA-IPAA 137

Query: 96  QRQQQQQQQISNSNSMNPVN-AQNVQFLRQ 124
                     +N   + P + + N     Q
Sbjct: 138 NNGTSIDSIPTNQGQLLPGSLSTNQSQAPQ 167



>gi|547239|gb|AAB31182.1|   p300=transcription coactivator {N-terminal} [mice, Peptide Partial,
           688 aa]
          Length = 688

 Score =  120 bits (302), Expect = 4e-27
 Identities = 19/123 (15%), Positives = 43/123 (34%), Gaps = 19/123 (15%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 569 RKQWHEDITQDLRNHLVHKLV---QAIFPTPDPAALKDRRMENLVAYARKVEGDMYESAN 625

Query: 62  SKEDYLRAIKMKVHQLRV----------QKQQIAANQGGQIN-PQQRQQQQQQQISNSNS 110
           ++ +Y   +  K+++++           QKQ +  N  G    P        QQ +   +
Sbjct: 626 NRAEYYHLLAEKIYKIQKELEEKRRTRLQKQNMLPNAPGMGPVPMNTGSNMGQQPTGMTT 685

Query: 111 MNP 113
             P
Sbjct: 686 NGP 688



>gi|22329593|ref|NP_173031.2|   expressed protein [Arabidopsis thaliana]
 gi|25513497|pir||C86292   F7H2.13 protein - Arabidopsis thaliana
 gi|8927658|gb|AAF82149.1|AC034256_13   ESTs gb|AI995735, gb|T44391, gb|AA395434 come from this gene.
           [Arabidopsis thaliana]
 gi|12083256|gb|AAG48787.1|AF332424_1   unknown protein [Arabidopsis thaliana]
          Length = 179

 Score =  120 bits (301), Expect = 4e-27
 Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 2/122 (1%)

Query: 5   NPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERSASKE 64
           +    WR  +    R ++V  I+ T  +            L K+A  FE+ ++  ++++ 
Sbjct: 2   DTTGDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQT 61

Query: 65  DYLRAIKMKVHQLRVQKQQIAANQGGQINPQQRQQQQQQQISNSNSMNPVN-AQNVQFLR 123
           +YLR I MK+  +  + Q  A +     N      +     +N  ++N  +         
Sbjct: 62  EYLRQICMKMLNMETKSQNAAGSSSADDNTPPLVPE-PSVPNNEPAVNTGDWRTQQPQDS 120

Query: 124 QQ 125
           +Q
Sbjct: 121 RQ 122




 Score = 79.5 bits (195), Expect = 9e-15
 Identities = 17/72 (23%), Positives = 37/72 (51%)

Query: 6   PNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERSASKED 65
               WR     + RQK +  +++TL ++   +    +  L ++A   E+L++  + ++ED
Sbjct: 108 NTGDWRTQQPQDSRQKNINALLDTLKKIVPHSGKEGIDELMRIAVSLEELIFNSAINQED 167

Query: 66  YLRAIKMKVHQL 77
           YL  I +K+  +
Sbjct: 168 YLGKISLKMRTM 179



>gi|27881767|gb|AAH44677.1|   Similar to CREB binding protein (Rubinstein-Taybi syndrome)
           [Xenopus laevis]
          Length = 1047

 Score =  116 bits (292), Expect = 5e-26
 Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 18/127 (14%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
             +W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 578 RKAWHEHVTQDLRNHLVHKLV---QAIFPTPDPAALKDRRMENLVAYARKVEGDMYESAN 634

Query: 62  SKEDYLRAIKMKVHQLRV----------QKQQIAANQGGQINPQQRQQQQQQQISNSNSM 111
           S+++Y   +  K+++++           QKQ I ++Q     P  +     Q        
Sbjct: 635 SRDEYYHFLAEKIYKIQKELEEKRRSRLQKQGIMSSQAPLQAPGAQPTALTQTSPALGQT 694

Query: 112 NPVNAQN 118
            PV   N
Sbjct: 695 QPVRPTN 701



>gi|4139873|pdb|1KDX|A   Chain A, Kix Domain Of Mouse Cbp (Creb Binding Protein) In
          Complex With Phosphorylated Kinase Inducible Domain
          (Pkid) Of Rat Creb (Cyclic Amp Response Element Binding
          Protein), Nmr 17 Structures
          Length = 81

 Score =  114 bits (287), Expect = 2e-25
 Identities = 11/82 (13%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 7  NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
             W    + + R  +V  ++     +  +     ++      L   A+  E  +YE + 
Sbjct: 3  RKGWHEHVTQDLRSHLVHKLV---QAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESAN 59

Query: 62 SKEDYLRAIKMKVHQLRVQKQQ 83
          S+++Y   +  K+++++ + ++
Sbjct: 60 SRDEYYHLLAEKIYKIQKELEE 81



>gi|28071313|dbj|BAC56002.1|   P0705A05.20 [Oryza sativa (japonica cultivar-group)]
          Length = 1359

 Score =  111 bits (277), Expect = 2e-24
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 11/109 (10%)

Query: 2   GGSNPN--------ASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFE 53
           GG +PN          WR+    E R ++V  I++TL +    +    +  L K+A  FE
Sbjct: 21  GGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPEGLNELQKIAVRFE 80

Query: 54  KLVYERSASKEDYLRAIKMKVHQLRVQKQQIAANQ---GGQINPQQRQQ 99
           + +Y  + S+ DYLR I +K+  +  + QQ   N      Q  P    +
Sbjct: 81  EKIYTAATSQSDYLRKISLKMLSMETKTQQNPGNAQVIQNQNPPGSESR 129



>gi|27260984|dbj|BAC45101.1|   OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)]
          Length = 414

 Score =  108 bits (271), Expect = 1e-23
 Identities = 17/71 (23%), Positives = 31/71 (43%)

Query: 2  GGSNPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERSA 61
          G       WR     + R +V + I+ +L     +  +  +  L K+A   E+ +Y+ + 
Sbjct: 5  GIIEEGVDWRTRLGQDIRDRVKRDILFSLQMKLQTTTSTTLIDLQKVAARIEERIYKIAI 64

Query: 62 SKEDYLRAIKM 72
             DYLR I +
Sbjct: 65 DFGDYLRRISL 75



>gi|7511830|pir||T13828   CREB-binding protein homolog - fruit fly (Drosophila melanogaster)
 gi|1916930|gb|AAB53050.1|   CREB-binding protein homolog [Drosophila melanogaster]
          Length = 3190

 Score =  108 bits (269), Expect = 2e-23
 Identities = 14/85 (16%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 5    NPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYER 59
            +    WR   + + R  +V  ++     +  ++    +Q      L   A+  EK +YE 
Sbjct: 938  DNEKDWRESVTADLRNHLVHKLV---QAIFPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994

Query: 60   SASKEDYLRAIKMKVHQLRVQKQQI 84
            + S+ +Y   +  K+++++ + ++ 
Sbjct: 995  AKSRSEYYHLLAEKIYKIQKELEEK 1019



>gi|31204369|ref|XP_311133.1|   ENSANGP00000004748 [Anopheles gambiae]
 gi|30178093|gb|EAA06516.2|   ENSANGP00000004748 [Anopheles gambiae str. PEST]
          Length = 2572

 Score =  107 bits (268), Expect = 3e-23
 Identities = 12/83 (14%), Positives = 33/83 (39%), Gaps = 8/83 (9%)

Query: 7   NASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYERSA 61
              W    + + R  +V  ++     +  S     +       L   A+  E  +YE + 
Sbjct: 742 TKDWHHSVTPDLRNHLVHKLV---QAIFPSPDPSAMFDKRMYNLVAYAKKVEGDMYEMAN 798

Query: 62  SKEDYLRAIKMKVHQLRVQKQQI 84
           S+ +Y   +  K+++++ + ++ 
Sbjct: 799 SRSEYYHLLAEKIYKIQKELEEK 821



>gi|24640865|ref|NP_524642.2|   nejire CG15319-PB [Drosophila melanogaster]
 gi|22833041|gb|AAF46516.2|   CG15319-PB [Drosophila melanogaster]
          Length = 3276

 Score =  106 bits (265), Expect = 7e-23
 Identities = 14/85 (16%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 5    NPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQR-----LSKMAQDFEKLVYER 59
            +    WR   + + R  +V  ++     +  ++    +Q      L   A+  EK +YE 
Sbjct: 938  DNEKDWRESVTADLRNHLVHKLV---QAIFPTSDPTTMQDKRMHNLVSYAEKVEKDMYEM 994

Query: 60   SASKEDYLRAIKMKVHQLRVQKQQI 84
            + S+ +Y   +  K+++++ + ++ 
Sbjct: 995  AKSRSEYYHLLAEKIYKIQKELEEK 1019



>gi|15226772|ref|NP_178842.1|   hypothetical protein [Arabidopsis thaliana]
 gi|25411357|pir||E84491   hypothetical protein At2g10440 [imported] - Arabidopsis thaliana
 gi|4733973|gb|AAD28655.1|   hypothetical protein [Arabidopsis thaliana]
          Length = 935

 Score = 67.6 bits (164), Expect = 3e-11
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 5  NPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYERSASKE 64
          N    WR+ +  E RQKV+  I+    E   ++  + +     +A  FE+  Y  +  K 
Sbjct: 20 NNRIDWRSQHEPELRQKVLSKIVEKFKEKFHAHEEYKIND---IASKFEENFYSIATDKT 76



>gi|17508323|ref|NP_493339.1|   KIX domain containing protein family member (80.3 kD)
           [Caenorhabditis elegans]
 gi|7505888|pir||T23651   hypothetical protein M01E5.6 - Caenorhabditis elegans
 gi|3878635|emb|CAB07643.1|   Hypothetical protein M01E5.6 [Caenorhabditis elegans]
 gi|3879438|emb|CAB03290.1|   Hypothetical protein M01E5.6 [Caenorhabditis elegans]
          Length = 702

 Score = 53.7 bits (128), Expect = 5e-07
 Identities = 17/101 (16%), Positives = 39/101 (38%), Gaps = 9/101 (8%)

Query: 3   GSNPNASWRAMYSGEERQKVVQIIINTLTELHGSNPN---FNVQRLSKMAQDFEKLVYER 59
           G+N +  W      + R  +V  ++        +         ++L   A+  E  + E 
Sbjct: 595 GTNTSKEW---IVEDIRNHMVGKLLKAFWPRIQNVEEMNGELFKKLIANARKCETEILEA 651

Query: 60  SASKEDYLRAIKM---KVHQLRVQKQQIAANQGGQINPQQR 97
           S  +++Y R +++   ++ +  ++K Q A     Q   Q  
Sbjct: 652 SNDRDEYYRLMQLTVDQILKKTLKKDQRATEHNHQQPTQSS 692



>gi|27260985|dbj|BAC45102.1|   OJ1705_C03.24 [Oryza sativa (japonica cultivar-group)]
          Length = 87

 Score = 53.7 bits (128), Expect = 5e-07
 Identities = 6/37 (16%), Positives = 15/37 (40%)

Query: 27 INTLTELHGSNPNFNVQRLSKMAQDFEKLVYERSASK 63
          +  L     +  +  +  L K+A   E+ +Y+ +   
Sbjct: 39 MPILQMKLQTTTSTTLIDLQKVAARIEERIYKIAIDF 75



>gi|27260988|dbj|BAC45105.1|   OJ1705_C03.27 [Oryza sativa (japonica cultivar-group)]
          Length = 194

 Score = 48.7 bits (115), Expect = 1e-05
 Identities = 6/26 (23%), Positives = 10/26 (38%)

Query: 2  GGSNPNASWRAMYSGEERQKVVQIII 27
          G  +    WR     + R +V   I+
Sbjct: 5  GIIDEGVDWRTRLGQDIRDRVTHDIL 30



>gi|19074594|ref|NP_586100.1|   MADS domain [Encephalitozoon cuniculi]
 gi|19069236|emb|CAD25704.1|   MADS domain [Encephalitozoon cuniculi]
          Length = 776

 Score = 44.1 bits (103), Expect = 4e-04
 Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 8/100 (8%)

Query: 13  MYSGEERQKVVQIIINTLTE--LHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLRAI 70
           M S EER++++  +   L E  +        ++     A   E+ +YE S SKE+YLR +
Sbjct: 1   MLSQEERKQMILKLFVALKESNIFPGYTPVQIKEA---AIRAEQRIYEESGSKEEYLRGM 57

Query: 71  KMKVHQLRVQKQQIAANQGGQINPQQRQQQQQQQISNSNS 110
             +  ++    + ++         +  Q+Q          
Sbjct: 58  DERFQRIE---RVVSNRSRADGRGKSTQEQMGSYEHARPQ 94






  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Jul 1, 2003  3:46 AM
  Number of letters in database: 469,658,079
  Number of sequences in database:  1,463,011
  
Lambda     K      H
   0.318    0.156    0.394 

Gapped
Lambda     K      H
   0.267   0.0477    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,019,902
Number of Sequences: 1463011
Number of extensions: 5585520
Number of successful extensions: 144182
Number of sequences better than  1.0: 100
Number of HSP's better than  1.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 886
Number of HSP's that attempted gapping in prelim test: 61306
Number of HSP's gapped (non-prelim): 36142
length of query: 138
length of database: 469,658,079
effective HSP length: 114
effective length of query: 24
effective length of database: 302,874,825
effective search space: 7268995800
effective search space used: 7268995800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)