################################### Hits in NP_564004 with E < 0.01 ######SEQUENCE MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAEN LKSVSLEP ######COMMAND blastpgp -i NP_564004 -F T -j 10 -a 4 -h 0.001 -e 10 -d nr ######HIT_SUMMARY HSP__Pos in Q_________________Subject__________________from species_______Pos in S___E-value___ 1 1 .. 128 NP_564004.1| expressed protein [Arabidop Arabidopsis tha 1 .. 128 E= 1.0e-60 1 1 .. 105 D86302 hypothetical protein F17F16.9 - A Arabidopsis tha 1 .. 105 E= 8.0e-57 1 1 .. 99 T01055 hypothetical protein YUP8H12R.38 Arabidopsis tha 44 .. 141 E= 6.0e-29 1 1 .. 100 NP_173115.1| expressed protein [Arabidop Arabidopsis tha 66 .. 164 E= 9.0e-29 1 1 .. 99 NP_565197.1| p300/CBP acetyltransferase- Arabidopsis tha 44 .. 141 E= 1.0e-28 1 1 .. 100 NP_187904.1| CREB-binding protein -relat Arabidopsis tha 36 .. 131 E= 4.0e-09 1 1 .. 100 AAM34787.1|AF512558_1 HAC5 [Arabidopsis Arabidopsis tha 5 .. 100 E= 4.0e-08 1 2 .. 72 AAF79331.1|AC002304_24 F14J16.27 [Arabid Arabidopsis tha 32 .. 124 E= 2.0e-03 1 2 .. 72 NP_564706.1| CREB-binding protein -relat Arabidopsis tha 32 .. 124 E= 2.0e-03 1 2 .. 72 AAF02849.1|AC009894_20 Unknown protein [ Arabidopsis tha 32 .. 124 E= 3.0e-03 1 2 .. 72 AAM34789.1|AF512560_1 HAC4 [Arabidopsis Arabidopsis tha 23 .. 115 E= 6.0e-03 ***** 11 Number of hits for NP_564004 below with E-value < 0.01 : 11 ######RAW OUTPUT BLASTP 2.2.4 [Aug-26-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NP_564004 (128 letters) Database: /local/data/sequences/fasta/nr 1,448,673 sequences; 466,090,050 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value ref|NP_564004.1| expressed protein [Arabidopsis thaliana] >gi|21... 231 1e-60 pir||D86302 hypothetical protein F17F16.9 - Arabidopsis thaliana... 219 8e-57 pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thali... 126 6e-29 ref|NP_173115.1| expressed protein [Arabidopsis thaliana] 125 9e-29 ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [A... 125 1e-28 ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thal... 61 4e-09 gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] 57 4e-08 emb|CAB81559.1| putative integrase [Pseudomonas fluorescens] >gi... 32 2.6 gb|AAO44172.1| inosine-5'-monophosphate dehydrogenase [Tropherym... 32 2.6 ref|NP_789033.1| inosine-5'-monophosphate dehydrogenase [Tropher... 31 2.7 emb|CAA67462.1| integrase-like protein [Pseudomonas sp.] 31 2.8 gb|AAB40067.1| ependymin [Rhamphichthys sp.] 31 3.7 gb|AAM23252.1|AC092553_18 Unknown protein [Oryza sativa (japonic... 31 3.8 gb|ZP_00096211.1| hypothetical protein [Novosphingobium aromatic... 30 5.4 ref|XP_150405.1| RIKEN cDNA 1600025M17 [Mus musculus] 30 6.1 emb|CAD19488.1| putative integrase [Pseudomonas fluorescens] 30 6.4 ref|NP_781498.1| conserved protein [Clostridium tetani E88] >gi|... 30 6.6 ref|NP_497916.1| Protein kinase family member [Caenorhabditis el... 30 6.8 gb|AAC17597.1| ependymin [Eigenmannia sp.] 30 8.6 ref|XP_236587.1| similar to copine IV [Homo sapiens] [Rattus nor... 30 9.1 emb|CAD60782.1| unnamed protein product [Podospora anserina] 30 9.4 >ref|NP_564004.1| expressed protein [Arabidopsis thaliana] gb|AAM67290.1| unknown [Arabidopsis thaliana] Length = 128 Score = 231 bits (590), Expect = 1e-60 Identities = 128/128 (100%), Positives = 128/128 (100%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP Sbjct: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAEN 120 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAEN Sbjct: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAEN 120 Query: 121 LKSVSLEP 128 LKSVSLEP Sbjct: 121 LKSVSLEP 128 >pir||D86302 hypothetical protein F17F16.9 - Arabidopsis thaliana gb|AAG09088.1|AC026237_9 Hypothetical protein [Arabidopsis thaliana] Length = 238 Score = 219 bits (557), Expect = 8e-57 Identities = 105/105 (100%), Positives = 105/105 (100%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP Sbjct: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTM 105 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTM Sbjct: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTM 105 >pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thaliana gb|AAC17068.1| Similar to CREB-binding protein homolog gb|U88570 from D. melanogaster and contains similarity to callus-associated protein gb|U01961 from Nicotiana tabacum. EST gb|W43427 comes from this gene. [Arabidopsis thaliana] Length = 1516 Score = 126 bits (317), Expect = 6e-29 Identities = 60/99 (60%), Positives = 81/99 (81%), Gaps = 1/99 (1%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 +DND+ ++R++MR IF L+++ P P D+ASK K++D A+RLEEGLFK+A TKE+Y+NP Sbjct: 44 VDNDILKLRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNP 103 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGV 99 STLE RL SLIKGRQLN Y +HA+SS++GT I PTPG+ Sbjct: 104 STLEPRLASLIKGRQLNNYNQRHANSSSVGTMI-PTPGL 141 >ref|NP_173115.1| expressed protein [Arabidopsis thaliana] Length = 1706 Score = 125 bits (315), Expect = 9e-29 Identities = 60/100 (60%), Positives = 82/100 (82%), Gaps = 1/100 (1%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 MD+D+ ++R+ M+ +F L++R P P D ASK K++D A+RLEEGLFKMA+TKE+Y+N Sbjct: 66 MDHDIMKLRQYMQTLVFNMLQQRQPSPADAASKAKYMDVARRLEEGLFKMAVTKEDYMNR 125 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100 STLESR+TSLIKGRQ+N Y +HA+SS++GT I PTPG+S Sbjct: 126 STLESRITSLIKGRQINNYNQRHANSSSVGTMI-PTPGLS 164 >ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] gb|AAG60059.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] Length = 1654 Score = 125 bits (315), Expect = 1e-28 Identities = 60/99 (60%), Positives = 81/99 (81%), Gaps = 1/99 (1%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 +DND+ ++R++MR IF L+++ P P D+ASK K++D A+RLEEGLFK+A TKE+Y+NP Sbjct: 44 VDNDILKLRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNP 103 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGV 99 STLE RL SLIKGRQLN Y +HA+SS++GT I PTPG+ Sbjct: 104 STLEPRLASLIKGRQLNNYNQRHANSSSVGTMI-PTPGL 141 >ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thaliana] dbj|BAB02507.1| CREB-binding protein-like [Arabidopsis thaliana] Length = 1670 Score = 60.8 bits (146), Expect = 4e-09 Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 4/100 (4%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 + D +R+ M + + L++R P DDASK K + AKRLE +++ A +KE+YL+ Sbjct: 36 ISQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDF 95 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100 + + R+ S +K QL + A+ S+ +T+ TPGVS Sbjct: 96 RSFDVRVESTLK--QL--LSQRRANPSSSVSTMVQTPGVS 131 >gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] Length = 453 Score = 57.4 bits (137), Expect = 4e-08 Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 4/100 (4%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 + D +R+ M + + L++R P DDASK K + AKRLE +++ A +KE+YL+ Sbjct: 5 ISQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDF 64 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100 + + R+ S +K QL + A+ S+ +T+ TPGVS Sbjct: 65 RSFDVRVESTLK--QL--LSQRRANPSSSVSTMVQTPGVS 100 >emb|CAB81559.1| putative integrase [Pseudomonas fluorescens] emb|CAB81566.1| integrase-like protein [Pseudomonas putida] emb|CAD19484.1| putative integrase [Pseudomonas fluorescens] emb|CAD19486.1| putative integrase [Pseudomonas sp. LS47-4] emb|CAD19480.1| putative integrase [Pseudomonas fluorescens] emb|CAD19482.1| putative integrase [Pseudomonas fluorescens] Length = 201 Score = 31.6 bits (70), Expect = 2.6 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 21/116 (18%) Query: 9 RRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESRLT 68 RR+ R AI L LP D+A+ L + ++ E LNP TL RLT Sbjct: 66 RRTYRSAIRHFLAWGGVLPCDEAA--------------LIRYLLSFAEVLNPRTLALRLT 111 Query: 69 SLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAENLKSV 124 +L + + + A S+T+G T+ V+ P R + + + E+L+ + Sbjct: 112 ALSQWHRYQGFPDPTA-SATVGKTLRGIERVNGRP------RQKAKALVLEDLERI 160 >gb|AAO44172.1| inosine-5'-monophosphate dehydrogenase [Tropheryma whipplei str. Twist] Length = 491 Score = 31.6 bits (70), Expect = 2.6 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 17/95 (17%) Query: 31 ASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESR-----------------LTSLIKG 73 A + +H+ K E G+ ++ L +E R L ++ Sbjct: 79 ADQAEHVTRVKLSESGMITRPVSVSPDLTLEEVEQRCSRYKISGFPVVDEDNTLLGIVTS 138 Query: 74 RQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNE 108 R + Y+H+H S + +T +P ++A P + +E Sbjct: 139 RDMWPYRHEHRASVRVSEVMTRSPLITASPNISSE 173 >ref|NP_789033.1| inosine-5'-monophosphate dehydrogenase [Tropheryma whipplei TW08/27] emb|CAD66770.1| inosine-5'-monophosphate dehydrogenase [Tropheryma whipplei TW08/27] Length = 491 Score = 31.2 bits (69), Expect = 2.7 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 17/95 (17%) Query: 31 ASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESR-----------------LTSLIKG 73 A + +H+ K E G+ ++ L +E R L ++ Sbjct: 79 ADQAEHVTRVKLSESGMITRPVSVSPDLTLEEVEQRCSRYKISGFPVVDEDNTLLGIVTS 138 Query: 74 RQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNE 108 R + Y+H+H S + +T +P ++A P + +E Sbjct: 139 RDMWPYRHEHRASVRVSEVMTRSPLITASPNISSE 173 >emb|CAA67462.1| integrase-like protein [Pseudomonas sp.] Length = 351 Score = 31.2 bits (69), Expect = 2.8 Identities = 31/116 (26%), Positives = 50/116 (42%), Gaps = 21/116 (18%) Query: 9 RRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESRLT 68 RR+ R AI L LP D+A+ L + ++ E LNP TL RLT Sbjct: 66 RRTYRSAIRHFLAWGGVLPCDEAA--------------LIRYLLSFAEVLNPRTLALRLT 111 Query: 69 SLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAENLKSV 124 +L + + + A S+T G T+ V+ P R + + + E+L+ + Sbjct: 112 ALSQWHRYQGFPDPTA-SATAGKTLRGIERVNGRP------RQKAKALVLEDLERI 160 >gb|AAB40067.1| ependymin [Rhamphichthys sp.] Length = 180 Score = 30.8 bits (68), Expect = 3.7 Identities = 15/39 (38%), Positives = 21/39 (53%) Query: 28 NDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESR 66 NDD++K H+D EEG+ +K E TL+SR Sbjct: 49 NDDSNKTSHIDVLIHFEEGVIYELDSKNESCKKQTLKSR 87 >gb|AAM23252.1|AC092553_18 Unknown protein [Oryza sativa (japonica cultivar-group)] gb|AAM47623.1|AC122147_12 Unknown protein [Oryza sativa (japonica cultivar-group)] gb|AAP51990.1| unknown protein [Oryza sativa (japonica cultivar-group)] Length = 787 Score = 30.8 bits (68), Expect = 3.8 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 17/116 (14%) Query: 14 DAIFVQLEKRNPLPNDDASK---GKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESRLTSL 70 D I V E++ + D+A + + +DA ++LEE L ++ + K E + T + Sbjct: 42 DTILVMKEEK--VSRDEALRLLLEEWMDAKRKLEEKLNRV-LEKFEEMEAHNGAEDATVI 98 Query: 71 IKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAENLKSVSL 126 IK A ++ L +PTP S P NEN T + N++ +L Sbjct: 99 IK-----------AATTDLREASSPTPKTSLSPVCFNENSMHAATSSSHNIELTAL 143 >gb|ZP_00096211.1| hypothetical protein [Novosphingobium aromaticivorans] Length = 326 Score = 30.4 bits (67), Expect = 5.4 Identities = 13/41 (31%), Positives = 26/41 (62%), Gaps = 3/41 (7%) Query: 1 MDNDVFQIRRSMRD---AIFVQLEKRNPLPNDDASKGKHLD 38 MD++ +++ R++ D A FV + NP P D+A G++++ Sbjct: 120 MDHEGWKVARALADRGIAAFVLKYRLNPTPRDEAEAGRYMN 160 >ref|XP_150405.1| RIKEN cDNA 1600025M17 [Mus musculus] Length = 94 Score = 30.0 bits (66), Expect = 6.1 Identities = 18/46 (39%), Positives = 22/46 (47%) Query: 55 EEYLNPSTLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100 +EYL PS + L S + GRQL + K S L TPG S Sbjct: 22 DEYLKPSLGKKNLMSFLLGRQLGRQKSDSEMSKWLWMVTRGTPGWS 67 >emb|CAD19488.1| putative integrase [Pseudomonas fluorescens] Length = 201 Score = 30.0 bits (66), Expect = 6.4 Identities = 22/81 (27%), Positives = 39/81 (47%), Gaps = 7/81 (8%) Query: 44 EEGLFKMAMTKEEYLNPSTLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEP 103 E L + ++ E LNP TL RLT+L + + + A S+T+G T+ V+ P Sbjct: 87 EAALIRYLLSFAEVLNPRTLALRLTALSQWHRYQGFPDPTA-SATVGKTLRGIERVNGRP 145 Query: 104 TMDNENRDQCETEIAENLKSV 124 R + + + E+L+ + Sbjct: 146 ------RQKAKALVLEDLERI 160 >ref|NP_781498.1| conserved protein [Clostridium tetani E88] gb|AAO35435.1| conserved protein [Clostridium tetani E88] Length = 571 Score = 30.0 bits (66), Expect = 6.6 Identities = 27/107 (25%), Positives = 45/107 (41%), Gaps = 27/107 (25%) Query: 3 NDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAM---------- 52 N+VF I+R + IF+++E +PL + + + + E L+K + Sbjct: 234 NNVFHIKREDKGKIFLRIEDLHPL--------RDVKILREMAEYLYKENIPYMVALIPVF 285 Query: 53 --TKEEYLNPSTLESRLTSLIKGRQ-------LNKYKHQHADSSTLG 90 TK YLN + L +K Q L+ Y HQ++ T G Sbjct: 286 IDTKTGYLNTISENKELIDTLKYMQEHGGSFILHGYTHQNSMKETSG 332 >ref|NP_497916.1| Protein kinase family member [Caenorhabditis elegans] pir||T21341 hypothetical protein F25F2.1 - Caenorhabditis elegans emb|CAA84659.1| Hypothetical protein F25F2.1a [Caenorhabditis elegans] Length = 467 Score = 30.0 bits (66), Expect = 6.8 Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 8/100 (8%) Query: 32 SKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESRLTSLIKGRQLNKYKHQHADSSTLGT 91 ++ + + +K+L EGL + + E NP + T ++ +++ + T Sbjct: 306 TESPYSEISKKLVEGLASVKTSSSEKWNPEWYDRSATRNLREKKIKNQPRSRESAEAEAT 365 Query: 92 TITPTPGVSAEPTMDNENRDQC------ETEIAENLKSVS 125 + TP S E + N+ RD+ T++ +N K VS Sbjct: 366 AVQTTPTGSTE--LQNDRRDKSVYVSTIVTKVVDNRKKVS 403 >gb|AAC17597.1| ependymin [Eigenmannia sp.] Length = 133 Score = 29.6 bits (65), Expect = 8.6 Identities = 14/39 (35%), Positives = 22/39 (55%) Query: 28 NDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESR 66 +DD++K H+D EEG+F +K E +L+SR Sbjct: 5 SDDSNKTSHIDVLIHFEEGVFFELDSKNESCKKQSLKSR 43 >ref|XP_236587.1| similar to copine IV [Homo sapiens] [Rattus norvegicus] Length = 612 Score = 29.6 bits (65), Expect = 9.1 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%) Query: 81 HQHADSSTLGTTITPTPGVSAEPTMDNENR 110 HQH D+ +GTT+T PG++ + T+ E + Sbjct: 375 HQHNDA--VGTTLTAVPGLTGDKTLTGEKK 402 >emb|CAD60782.1| unnamed protein product [Podospora anserina] Length = 910 Score = 29.6 bits (65), Expect = 9.4 Identities = 21/73 (28%), Positives = 39/73 (52%), Gaps = 5/73 (6%) Query: 31 ASKGKHLDAAKRLEEGLFKMAMTKEEYLNPSTLESRLTSL---IKGRQLNKYKHQHADSS 87 A++ + DA RLE +TK ++ +T +R+ S +G++ +++ Q+ Sbjct: 443 AAEHGNKDAKDRLESLSQSKTLTKADH--ETTTLTRIKSQHGSQRGKRPDRFARQNEVLP 500 Query: 88 TLGTTITPTPGVS 100 TLG T+TP PG + Sbjct: 501 TLGETVTPPPGAA 513 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: ref|NP_564004.1| expressed protein [Arabidopsis thaliana] >gi|21... 217 3e-56 pir||D86302 hypothetical protein F17F16.9 - Arabidopsis thaliana... 198 2e-50 ref|NP_173115.1| expressed protein [Arabidopsis thaliana] 184 2e-46 pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thali... 184 3e-46 ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [A... 182 7e-46 ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thal... 154 2e-37 gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] 144 3e-34 Sequences not found previously or not previously below threshold: gb|AAF79331.1|AC002304_24 F14J16.27 [Arabidopsis thaliana] 42 0.002 ref|NP_564706.1| CREB-binding protein -related [Arabidopsis thal... 42 0.002 gb|AAF02849.1|AC009894_20 Unknown protein [Arabidopsis thaliana] 41 0.003 gb|AAM34789.1|AF512560_1 HAC4 [Arabidopsis thaliana] 40 0.006 dbj|BAC33619.1| unnamed protein product [Mus musculus] 35 0.16 gb|AAH49865.1| Unknown (protein for IMAGE:4951413) [Mus musculus] 35 0.16 ref|NP_033211.1| Tal1 interrupting locus [Mus musculus] >gi|1173... 35 0.18 ref|NP_792661.1| helicase domain protein [Pseudomonas syringae p... 33 0.77 dbj|BAB55221.1| unnamed protein product [Homo sapiens] 33 1.2 ref|NP_065186.2| ATPase, Class V, type 10D; putative type IV ami... 33 1.2 dbj|BAC11299.1| unnamed protein product [Homo sapiens] 33 1.2 dbj|BAA96011.1| KIAA1487 protein [Homo sapiens] 33 1.2 dbj|BAC25593.1| unnamed protein product [Mus musculus] 32 1.7 pir||T48713 hypothetical protein 1A9.170 [imported] - Neurospora... 32 1.8 ref|NP_641482.1| TonB-dependent receptor [Xanthomonas axonopodis... 32 2.2 dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-g... 32 2.7 ref|XP_233429.1| similar to Tal1 interrupting locus [Mus musculu... 31 3.8 gb|EAA20501.1| ubiquitin-conjugating enzyme e2-17 kDa [Plasmodiu... 31 4.1 ref|NP_650399.1| CG7292-PA [Drosophila melanogaster] >gi|2317129... 31 4.6 ref|NP_702141.1| hypothetical protein [Plasmodium falciparum 3D7... 30 7.2 gb|EAA27336.1| hypothetical protein [Neurospora crassa] 30 8.7 CONVERGED! >ref|NP_564004.1| expressed protein [Arabidopsis thaliana] gb|AAM67290.1| unknown [Arabidopsis thaliana] Length = 128 Score = 217 bits (553), Expect = 3e-56 Identities = 128/128 (100%), Positives = 128/128 (100%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP Sbjct: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAEN 120 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAEN Sbjct: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCETEIAEN 120 Query: 121 LKSVSLEP 128 LKSVSLEP Sbjct: 121 LKSVSLEP 128 >pir||D86302 hypothetical protein F17F16.9 - Arabidopsis thaliana gb|AAG09088.1|AC026237_9 Hypothetical protein [Arabidopsis thaliana] Length = 238 Score = 198 bits (503), Expect = 2e-50 Identities = 105/105 (100%), Positives = 105/105 (100%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP Sbjct: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTM 105 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTM Sbjct: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVSAEPTM 105 >ref|NP_173115.1| expressed protein [Arabidopsis thaliana] Length = 1706 Score = 184 bits (468), Expect = 2e-46 Identities = 60/100 (60%), Positives = 82/100 (82%), Gaps = 1/100 (1%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 MD+D+ ++R+ M+ +F L++R P P D ASK K++D A+RLEEGLFKMA+TKE+Y+N Sbjct: 66 MDHDIMKLRQYMQTLVFNMLQQRQPSPADAASKAKYMDVARRLEEGLFKMAVTKEDYMNR 125 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100 STLESR+TSLIKGRQ+N Y +HA+SS++GT I PTPG+S Sbjct: 126 STLESRITSLIKGRQINNYNQRHANSSSVGTMI-PTPGLS 164 >pir||T01055 hypothetical protein YUP8H12R.38 - Arabidopsis thaliana gb|AAC17068.1| Similar to CREB-binding protein homolog gb|U88570 from D. melanogaster and contains similarity to callus-associated protein gb|U01961 from Nicotiana tabacum. EST gb|W43427 comes from this gene. [Arabidopsis thaliana] Length = 1516 Score = 184 bits (466), Expect = 3e-46 Identities = 60/99 (60%), Positives = 81/99 (81%), Gaps = 1/99 (1%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 +DND+ ++R++MR IF L+++ P P D+ASK K++D A+RLEEGLFK+A TKE+Y+NP Sbjct: 44 VDNDILKLRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNP 103 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGV 99 STLE RL SLIKGRQLN Y +HA+SS++GT I PTPG+ Sbjct: 104 STLEPRLASLIKGRQLNNYNQRHANSSSVGTMI-PTPGL 141 >ref|NP_565197.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] gb|AAG60059.1| p300/CBP acetyltransferase-related protein 2 [Arabidopsis thaliana] Length = 1654 Score = 182 bits (463), Expect = 7e-46 Identities = 60/99 (60%), Positives = 81/99 (81%), Gaps = 1/99 (1%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 +DND+ ++R++MR IF L+++ P P D+ASK K++D A+RLEEGLFK+A TKE+Y+NP Sbjct: 44 VDNDILKLRQAMRIRIFNILQQKQPSPADEASKAKYMDVARRLEEGLFKIANTKEDYVNP 103 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGV 99 STLE RL SLIKGRQLN Y +HA+SS++GT I PTPG+ Sbjct: 104 STLEPRLASLIKGRQLNNYNQRHANSSSVGTMI-PTPGL 141 >ref|NP_187904.1| CREB-binding protein -related [Arabidopsis thaliana] dbj|BAB02507.1| CREB-binding protein-like [Arabidopsis thaliana] Length = 1670 Score = 154 bits (390), Expect = 2e-37 Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 4/100 (4%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 + D +R+ M + + L++R P DDASK K + AKRLE +++ A +KE+YL+ Sbjct: 36 ISQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDF 95 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100 + + R+ S +K QL + A+ S+ +T+ TPGVS Sbjct: 96 RSFDVRVESTLK--QL--LSQRRANPSSSVSTMVQTPGVS 131 >gb|AAM34787.1|AF512558_1 HAC5 [Arabidopsis thaliana] Length = 453 Score = 144 bits (362), Expect = 3e-34 Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 4/100 (4%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLNP 60 + D +R+ M + + L++R P DDASK K + AKRLE +++ A +KE+YL+ Sbjct: 5 ISQDTLLLRQEMLNRTYAWLQQRQPSKTDDASKAKLSEVAKRLESAMWRTATSKEDYLDF 64 Query: 61 STLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGVS 100 + + R+ S +K QL + A+ S+ +T+ TPGVS Sbjct: 65 RSFDVRVESTLK--QL--LSQRRANPSSSVSTMVQTPGVS 100 >gb|AAF79331.1|AC002304_24 F14J16.27 [Arabidopsis thaliana] Length = 1550 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/93 (19%), Positives = 43/93 (45%), Gaps = 22/93 (23%) Query: 2 DNDVFQIRRSMRDAIFVQLE--------------KRNPLPNDDASKGKHLD--------A 39 +N + + R ++R+ I+ + ++ DDA++ L+ A Sbjct: 32 NNFIKKRRTALRNRIYAIVRHKQKQHQIFLDKKNQQQQQRVDDATQRALLEKQDQQCIAA 91 Query: 40 AKRLEEGLFKMAMTKEEYLNPSTLESRLTSLIK 72 + +EE L K + + EEY + T ++R+ ++++ Sbjct: 92 TRMIEEELLKSSRSFEEYFDLRTFDARVRTILQ 124 >ref|NP_564706.1| CREB-binding protein -related [Arabidopsis thaliana] Length = 1456 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/93 (19%), Positives = 43/93 (45%), Gaps = 22/93 (23%) Query: 2 DNDVFQIRRSMRDAIFVQLE--------------KRNPLPNDDASKGKHLD--------A 39 +N + + R ++R+ I+ + ++ DDA++ L+ A Sbjct: 32 NNFIKKRRTALRNRIYAIVRHKQKQHQIFLDKKNQQQQQRVDDATQRALLEKQDQQCIAA 91 Query: 40 AKRLEEGLFKMAMTKEEYLNPSTLESRLTSLIK 72 + +EE L K + + EEY + T ++R+ ++++ Sbjct: 92 TRMIEEELLKSSRSFEEYFDLRTFDARVRTILQ 124 >gb|AAF02849.1|AC009894_20 Unknown protein [Arabidopsis thaliana] Length = 1209 Score = 41.2 bits (95), Expect = 0.003 Identities = 18/93 (19%), Positives = 43/93 (45%), Gaps = 22/93 (23%) Query: 2 DNDVFQIRRSMRDAIFVQLE--------------KRNPLPNDDASKGKHLD--------A 39 +N + + R ++R+ I+ + ++ DDA++ L+ A Sbjct: 32 NNFIKKRRTALRNRIYAIVRHKQKQHQIFLDKKNQQQQQRVDDATQRALLEKQDQQCIAA 91 Query: 40 AKRLEEGLFKMAMTKEEYLNPSTLESRLTSLIK 72 + +EE L K + + EEY + T ++R+ ++++ Sbjct: 92 TRMIEEELLKSSRSFEEYFDLRTFDARVRTILQ 124 >gb|AAM34789.1|AF512560_1 HAC4 [Arabidopsis thaliana] Length = 751 Score = 40.4 bits (93), Expect = 0.006 Identities = 18/93 (19%), Positives = 43/93 (45%), Gaps = 22/93 (23%) Query: 2 DNDVFQIRRSMRDAIFVQLE--------------KRNPLPNDDASKGKHLD--------A 39 +N + + R ++R+ I+ + ++ DDA++ L+ A Sbjct: 23 NNFIKKRRTALRNRIYAIVRHKQKQHQIFLDKKNQQQQQRVDDATQRALLEKQDQQCIAA 82 Query: 40 AKRLEEGLFKMAMTKEEYLNPSTLESRLTSLIK 72 + +EE L K + + EEY + T ++R+ ++++ Sbjct: 83 TRMIEEELLKSSRSFEEYFDLRTFDARVRTILQ 115 >dbj|BAC33619.1| unnamed protein product [Mus musculus] Length = 1094 Score = 35.4 bits (80), Expect = 0.16 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 38 DAAKRLEEGLFKMAMTKEEY-LNPSTLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPT 96 D A++L+ + +M KE+Y + PSTL+SR SL Q + +S+ PT Sbjct: 516 DVAEKLQ-AVSAGSMQKEDYPVRPSTLDSRQPSLAPQAQPHNLVFSTHNSTRPMELQVPT 574 Query: 97 PGV-SAEPT 104 P + S PT Sbjct: 575 PSLPSYYPT 583 >gb|AAH49865.1| Unknown (protein for IMAGE:4951413) [Mus musculus] Length = 942 Score = 35.4 bits (80), Expect = 0.16 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 38 DAAKRLEEGLFKMAMTKEEY-LNPSTLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPT 96 D A++L+ + +M KE+Y + PSTL+SR SL Q + +S+ PT Sbjct: 491 DVAEKLQ-AVSAGSMQKEDYPVRPSTLDSRQPSLAPQAQPHNLVFSTHNSTRPMELQVPT 549 Query: 97 PGV-SAEPT 104 P + S PT Sbjct: 550 PSLPSYYPT 558 >ref|NP_033211.1| Tal1 interrupting locus [Mus musculus] gb|AAC52386.1| SIL emb|CAC14001.1| SIL protein [Mus musculus] prf||2204263A SIL gene Length = 1262 Score = 35.4 bits (80), Expect = 0.18 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 38 DAAKRLEEGLFKMAMTKEEY-LNPSTLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPT 96 D A++L+ + +M KE+Y + PSTL+SR SL Q + +S+ PT Sbjct: 516 DVAEKLQ-AVSAGSMQKEDYPVRPSTLDSRQPSLAPQAQPHNLVFSTHNSTRPMELQVPT 574 Query: 97 PGV-SAEPT 104 P + S PT Sbjct: 575 PSLPSYYPT 583 >ref|NP_792661.1| helicase domain protein [Pseudomonas syringae pv. tomato str. DC3000] gb|AAO56356.1| helicase domain protein [Pseudomonas syringae pv. tomato str. DC3000] Length = 459 Score = 33.1 bits (74), Expect = 0.77 Identities = 25/97 (25%), Positives = 40/97 (40%), Gaps = 15/97 (15%) Query: 17 FVQLEKRNPLPNDDAS----KGKHLDAAKRLE-EGLFKMAMTKEEYLNPSTLESRLTSL- 70 F + ++ P + S +G++LD A R GL + A E ++ ESR SL Sbjct: 312 FNNIIRQPPDKAREYSREDNRGRYLDLATRDRVTGLREYAPGAEVVMDGWVYESRGISLN 371 Query: 71 ---------IKGRQLNKYKHQHADSSTLGTTITPTPG 98 ++ QL KY + + G+T PG Sbjct: 372 WRLPASEEILREAQLFKYAWRCSHCGASGSTFAQQPG 408 >dbj|BAB55221.1| unnamed protein product [Homo sapiens] Length = 674 Score = 32.7 bits (73), Expect = 1.2 Identities = 22/90 (24%), Positives = 36/90 (39%), Gaps = 11/90 (12%) Query: 39 AAKRLEEGLFKMAMTKEEYLNPSTLESRLTSLIKGRQLNKYKH---QHADSSTLGTTITP 95 + L+ LF + + ++ + T E R +L K R K ++A+ S + P Sbjct: 564 VYRVLQGSLFPSPILRAKHFDRLTPEERTKALKKWRGAGKMNQVTSKYANQSAGKSGRRP 623 Query: 96 TPGVSAEPTM--------DNENRDQCETEI 117 PG SA M + N CET + Sbjct: 624 MPGPSAVFAMKSASSCAIEQGNLSLCETAL 653 >ref|NP_065186.2| ATPase, Class V, type 10D; putative type IV aminophospholipid transporting ATPase [Homo sapiens] sp|Q9P241|A10D_HUMAN Potential phospholipid-transporting ATPase VD (ATPVD) emb|CAD29577.1| putative type IV aminophospholipid transporting ATPase [Homo sapiens] Length = 1426 Score = 32.7 bits (73), Expect = 1.2 Identities = 22/90 (24%), Positives = 36/90 (39%), Gaps = 11/90 (12%) Query: 39 AAKRLEEGLFKMAMTKEEYLNPSTLESRLTSLIKGRQLNKYKH---QHADSSTLGTTITP 95 + L+ LF + + ++ + T E R +L K R K ++A+ S + P Sbjct: 1316 VYRVLQGSLFPSPILRAKHFDRLTPEERTKALKKWRGAGKMNQVTSKYANQSAGKSGRRP 1375 Query: 96 TPGVSAEPTM--------DNENRDQCETEI 117 PG SA M + N CET + Sbjct: 1376 MPGPSAVFAMKSASSCAIEQGNLSLCETAL 1405 >dbj|BAC11299.1| unnamed protein product [Homo sapiens] Length = 314 Score = 32.7 bits (73), Expect = 1.2 Identities = 22/90 (24%), Positives = 36/90 (39%), Gaps = 11/90 (12%) Query: 39 AAKRLEEGLFKMAMTKEEYLNPSTLESRLTSLIKGRQLNKYKH---QHADSSTLGTTITP 95 + L+ LF + + ++ + T E R +L K R K ++A+ S + P Sbjct: 204 VYRVLQGSLFPSPILRAKHFDRLTPEERTKALKKWRGAGKMNQVTSKYANQSAGKSGRRP 263 Query: 96 TPGVSAEPTM--------DNENRDQCETEI 117 PG SA M + N CET + Sbjct: 264 MPGPSAVFAMKSASSCAIEQGNLSLCETAL 293 >dbj|BAA96011.1| KIAA1487 protein [Homo sapiens] Length = 650 Score = 32.7 bits (73), Expect = 1.2 Identities = 22/90 (24%), Positives = 36/90 (39%), Gaps = 11/90 (12%) Query: 39 AAKRLEEGLFKMAMTKEEYLNPSTLESRLTSLIKGRQLNKYKH---QHADSSTLGTTITP 95 + L+ LF + + ++ + T E R +L K R K ++A+ S + P Sbjct: 540 VYRVLQGSLFPSPILRAKHFDRLTPEERTKALKKWRGAGKMNQVTSKYANQSAGKSGRRP 599 Query: 96 TPGVSAEPTM--------DNENRDQCETEI 117 PG SA M + N CET + Sbjct: 600 MPGPSAVFAMKSATSCAIEQGNLSLCETAL 629 >dbj|BAC25593.1| unnamed protein product [Mus musculus] Length = 533 Score = 31.9 bits (71), Expect = 1.7 Identities = 20/55 (36%), Positives = 27/55 (48%), Gaps = 2/55 (3%) Query: 52 MTKEEY-LNPSTLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPTPGV-SAEPT 104 M KE+Y + PSTL+SR SL Q + +S+ PTP + S PT Sbjct: 1 MQKEDYPVRPSTLDSRQPSLAPQAQPHNLVFSTHNSTRPMELQVPTPSLPSYYPT 55 >pir||T48713 hypothetical protein 1A9.170 [imported] - Neurospora crassa gb|EAA32404.1| hypothetical protein ( hypothetical protein 1A9.170 [imported] - Neurospora crassa ) Length = 136 Score = 31.9 bits (71), Expect = 1.8 Identities = 28/118 (23%), Positives = 45/118 (37%), Gaps = 15/118 (12%) Query: 1 MDNDVFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLDAAKRLEEGLFKMAMTKEEYLN- 59 MD +R S+R + Q P D G++ + E F++A + E L+ Sbjct: 1 MDQLFPSVRPSIRPPVSRQHRDSQPRWAPDGPDGRYGRRGQDGESPWFRLAKSPYEVLDI 60 Query: 60 ---PSTLESRL------TSLIKGRQLNKYKHQHADS-----STLGTTITPTPGVSAEP 103 S R + + RQL+ + Q S ++ + PTPG S EP Sbjct: 61 LEQFSLFPLRAFRGLVWVLMCQSRQLSPFSSQEPASFQGQRASYKRLLHPTPGQSPEP 118 >ref|NP_641482.1| TonB-dependent receptor [Xanthomonas axonopodis pv. citri str. 306] gb|AAM36018.1| TonB-dependent receptor [Xanthomonas axonopodis pv. citri str. 306] Length = 934 Score = 31.5 bits (70), Expect = 2.2 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 11/106 (10%) Query: 27 PNDDASKGKHLDAAKR-------LEEG---LFKMAMTKEEYLNPSTLESRLTSLIKGRQL 76 P + AS DAA R E G L M +T N + +ES+ + + Sbjct: 5 PANTASTTSRNDAAGRGAPAADAPESGVKTLDAMQVTGVRRANAAAVESKRAATNITDVI 64 Query: 77 NKYKHQHADSSTLGTTITPTPGVSAEPTMDNEN-RDQCETEIAENL 121 + + ST+ + PG+S P DNE+ RD+ T + L Sbjct: 65 SATDVRALPDSTIVEALRRVPGLSVLPATDNEHPRDEAATPVLRGL 110 >dbj|BAC45101.1| OJ1705_C03.23 [Oryza sativa (japonica cultivar-group)] Length = 414 Score = 31.5 bits (70), Expect = 2.7 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 14/61 (22%) Query: 36 HLDAAKRLEEGLFKMAMTKEEYLNPSTLESRLTSLIKGR-------QLNKYKHQHADSST 88 A R+EE ++K+A+ +YL R SLIKG LN + H H +ST Sbjct: 48 LQKVAARIEERIYKIAIDFGDYL-------RRISLIKGDLDDSYPLMLNNFLHIHQQAST 100 Query: 89 L 89 Sbjct: 101 S 101 >ref|XP_233429.1| similar to Tal1 interrupting locus [Mus musculus] [Rattus norvegicus] Length = 1194 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/63 (28%), Positives = 31/63 (48%), Gaps = 2/63 (3%) Query: 38 DAAKRLEEGLFKMAMTKEEY-LNPSTLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPT 96 D A++L+ + +M+KE+Y + PS L+SR SL + +S+ PT Sbjct: 447 DVAEKLQ-AVSAGSMSKEDYPVRPSLLDSRQPSLAPQAHPHNLVFSPHNSTRPMELQVPT 505 Query: 97 PGV 99 P + Sbjct: 506 PSL 508 >gb|EAA20501.1| ubiquitin-conjugating enzyme e2-17 kDa [Plasmodium yoelii yoelii] Length = 412 Score = 30.8 bits (68), Expect = 4.1 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%) Query: 86 SSTLGTTITP-TPGVSAEPTMDNENRDQCETEIAENLKSVSL 126 LG TI P P + A+ T DNEN D+ +EI +++ S+ Sbjct: 113 PQRLGRTIIPLNPKLLAQSTFDNENIDEYLSEIHKDVHKYSI 154 >ref|NP_650399.1| CG7292-PA [Drosophila melanogaster] gb|AAF55107.2| CG7292-PA [Drosophila melanogaster] Length = 885 Score = 30.8 bits (68), Expect = 4.6 Identities = 14/63 (22%), Positives = 28/63 (44%) Query: 37 LDAAKRLEEGLFKMAMTKEEYLNPSTLESRLTSLIKGRQLNKYKHQHADSSTLGTTITPT 96 LD K L+ ++M ++ ++ + ++ + GR N QHA+ LG+ + Sbjct: 396 LDVDKSLQLADWRMRPLPQQLVDYARQDTHFLIYVYGRMTNDLLQQHAEPGLLGSVYQQS 455 Query: 97 PGV 99 V Sbjct: 456 TDV 458 >ref|NP_702141.1| hypothetical protein [Plasmodium falciparum 3D7] gb|AAN36865.1|AE014820_15 hypothetical protein [Plasmodium falciparum 3D7] Length = 1477 Score = 30.0 bits (66), Expect = 7.2 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 7/111 (6%) Query: 5 VFQIRRSMRDAIFVQLEKRNPLPNDDASKGKHLD-AAKRLEEGLFKMAMTKEEYLNPSTL 63 + +IR+ I +L++ N L N + K +D ++ EE + T+EE +N Sbjct: 1212 IQKIRKENEMEIDRKLQENNNLENIISQKNDIIDELQRKYEEVYLQKKETEEENVNIKNK 1271 Query: 64 ESRLTSLIKGRQLNKYKHQHADSSTLGTTITP-----TPGVSAEPTMDNEN 109 + SL+K Q +KY H + + TL + G+S ++ +EN Sbjct: 1272 TVSMESLLKSLQ-SKYTHMQSQNKTLNNKLIDQKNRINEGISIINSLTSEN 1321 >gb|EAA27336.1| hypothetical protein [Neurospora crassa] Length = 2042 Score = 29.6 bits (65), Expect = 8.7 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 2/76 (2%) Query: 49 KMAMTKEEYLNPSTLESRLTSLIKGRQLNKYKHQHADS--STLGTTITPTPGVSAEPTMD 106 K ++Y S +SR + +L + + Q A+ ST + P V + Sbjct: 107 KTQTQPKKYAPFSPGDSRALEVAYQARLEEIEQQRANPKRSTSVRLGSKRPRVVSGDEAH 166 Query: 107 NENRDQCETEIAENLK 122 N N D E E +++ Sbjct: 167 NTNLDSTEEEAKNHVR 182 Database: /local/data/sequences/fasta/nr Posted date: Jun 21, 2003 5:21 PM Number of letters in database: 466,090,050 Number of sequences in database: 1,448,673 Lambda K H 0.298 0.137 0.373 Lambda K H 0.267 0.0418 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 218,943,161 Number of Sequences: 1448673 Number of extensions: 8057125 Number of successful extensions: 19082 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 67 Number of HSP's that attempted gapping in prelim test: 19028 Number of HSP's gapped (non-prelim): 116 length of query: 128 length of database: 466,090,050 effective HSP length: 104 effective length of query: 24 effective length of database: 315,428,058 effective search space: 7570273392 effective search space used: 7570273392 T: 11 A: 40 X1: 16 ( 6.9 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.0 bits) S2: 65 (29.6 bits)