RID=1056540242-01706-24605, gi|7493813|pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) BLASTP 2.2.6 [Apr-09-2003]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

RID: 1056540242-01706-24605

Query= gi|7493813|pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans) (1145 letters)

Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 1,459,100 sequences; 468,613,799 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs


Distribution of 9 Blast Hits on the Query Sequence




                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7493813|pir||T18235  transcription activator GAL11 homolo...  1094   0.0  
gi|1169834|sp|P32257|GALY_KLULA  TRANSCRIPTION REGULATORY PR...    88   1e-15
gi|171550|gb|AAA34622.1|  auxiliary activator                      63   3e-08
gi|6324522|ref|NP_014591.1|  Regulates transcription of a di...    63   3e-08
gi|7522544|pir||T39415  probable transcription regulator SPB...    50   2e-04
gi|28071313|dbj|BAC56002.1|  P0705A05.20 [Oryza sativa (japo...    47   0.002
gi|24461860|gb|AAN62347.1|AF506028_14  CTV.20 [Poncirus trif...    42   0.086
gi|24461867|gb|AAN62354.1|AF506028_23  CTV.22 [Poncirus trif...    39   0.39 
gi|15218294|ref|NP_173030.1|  expressed protein [Arabidopsis...    38   0.87 
Alignments
>gi|7493813|pir||T18235 transcription activator GAL11 homolog - yeast (Candida albicans)
 gi|3859719|emb|CAA21993.1| possible regulatory protein [Candida albicans]
          Length = 1145

 Score = 1094 bits (2830), Expect = 0.0
 Identities = 678/1145 (59%), Positives = 678/1145 (59%)

Query: 1    MNIPPNQNSLQQMGGGSNPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSK 60
            MNIPPNQNSLQQMGGGSNPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSK
Sbjct: 1    MNIPPNQNSLQQMGGGSNPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSK 60

Query: 61   MAQDFEKLVYERSASKEDYLRAIKMKVHQLRVQKQQIAAXXXXXXXXXXXXXXXXXXXXX 120
            MAQDFEKLVYERSASKEDYLRAIKMKVHQLRVQKQQIAA                     
Sbjct: 61   MAQDFEKLVYERSASKEDYLRAIKMKVHQLRVQKQQIAANQGGQINPQQRQQQQQQQISN 120

Query: 121  XXSMNPVNAQNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
              SMNPVNAQNV                                                
Sbjct: 121  SNSMNPVNAQNVQFLRQQAQARSQSQAQIQARQQQLRNMVNQQSQQQQQPQPQQTVQPQS 180

Query: 181  XXXXXXXXXXXXXXXXXNVXXXXXXXXXXXXXXTQGQLPPQLVNLMRTSXXXXXXXXXXX 240
                             NV              TQGQLPPQLVNLMRTS           
Sbjct: 181  QEHQQDQQNTSSQSTQQNVASGAGSGGRGNASSTQGQLPPQLVNLMRTSPIPPPLLNKMP 240

Query: 241  XXXAGVNTWNQIFDLIRKRLIPPDMVPTIRDIHGMHLQLFIRQQQQKLSMQRNMNEGNNG 300
               AGVNTWNQIFDLIRKRLIPPDMVPTIRDIHGMHLQLFIRQQQQKLSMQRNMNEGNNG
Sbjct: 241  KLPAGVNTWNQIFDLIRKRLIPPDMVPTIRDIHGMHLQLFIRQQQQKLSMQRNMNEGNNG 300

Query: 301  DNLAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRESLXXXXXXXXXXXXXXXXXXX 360
            DNLAQG                             QQRESL                   
Sbjct: 301  DNLAQGPNANNNNNINTSTHNNSNPTPNNFNNLTPQQRESLLRQTRMQQQLEQQKKGQQP 360

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDYAKYSND 420
                                                               EDYAKYSND
Sbjct: 361  MQQATSSSQQQQQKQQQQQQPVSQSGQTPQLAQQPNNQQQQQQQPQITITQEDYAKYSND 420

Query: 421  XXXXXXXXXXXXXXXXXXXXXXKEAFIKKFIIHQKTLQYKQRLSQQATGNANVNIGPSST 480
                                  KEAFIKKFIIHQKTLQYKQRLSQQATGNANVNIGPSST
Sbjct: 421  ALNLLAKLQQQKQMQGQINGQMKEAFIKKFIIHQKTLQYKQRLSQQATGNANVNIGPSST 480

Query: 481  NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPGLGN 540
            N                                                    GSPGLGN
Sbjct: 481  NQQQLSQIPNQQQQQQQQQQQQVPQSQPHASQQSPVLQQSQPPQQAPVQNVPQGSPGLGN 540

Query: 541  MATPQMKQGITSNPTNLSSPLVPQQVPVXXXXXXXXXXXXXRGRPVTAPANITMSSILPP 600
            MATPQMKQGITSNPTNLSSPLVPQQVPV             RGRPVTAPANITMSSILPP
Sbjct: 541  MATPQMKQGITSNPTNLSSPLVPQQVPVSNNNSASQNNNINRGRPVTAPANITMSSILPP 600

Query: 601  LTDEVKLRLRQLIEEVSRNNVVLRDVTSLLSNQDKTTVRDSMNRIQEQYGNVDSIISYFY 660
            LTDEVKLRLRQLIEEVSRNNVVLRDVTSLLSNQDKTTVRDSMNRIQEQYGNVDSIISYFY
Sbjct: 601  LTDEVKLRLRQLIEEVSRNNVVLRDVTSLLSNQDKTTVRDSMNRIQEQYGNVDSIISYFY 660

Query: 661  LLTKNGDGTKRLIQMKYMTKNILDNLHRGIYLAGPDLLEKVRSQYAKYFEYVKEQINLRR 720
            LLTKNGDGTKRLIQMKYMTKNILDNLHRGIYLAGPDLLEKVRSQYAKYFEYVKEQINLRR
Sbjct: 661  LLTKNGDGTKRLIQMKYMTKNILDNLHRGIYLAGPDLLEKVRSQYAKYFEYVKEQINLRR 720

Query: 721  QQVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780
            QQVL                                                        
Sbjct: 721  QQVLQQGGANMMSSQQQQQQQQQNMTRSQPQSQQQQQMMQNQSRNQAFMNQNQQIQQSSS 780

Query: 781  XXXXXXXXWGTGTGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVNSSPVIPQQPT 840
                    WGTGTGVA                               GVNSSPVIPQQPT
Sbjct: 781  NQQVNQGNWGTGTGVANNQMNLTPQLQQQQPPPPLPPQQQQQQTMQPGVNSSPVIPQQPT 840

Query: 841  PIQHPMSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNKKGTGQGRKKKASISX 900
            PIQHPMSG                                  TNKKGTGQGRKKKASIS 
Sbjct: 841  PIQHPMSGPQQVLVQQQQQQQQQQPPQRQQSVSKASQKSVAKTNKKGTGQGRKKKASISA 900

Query: 901  XXXXXXXXXXXXXXXXXXNAIKTPHNXXXXXXXXXXXSNKNTPSAQSPAYPVKATPSSTT 960
                              NAIKTPHN           SNKNTPSAQSPAYPVKATPSSTT
Sbjct: 901  GTAPTPGALPATTPGTLANAIKTPHNIPTPQIPPQTQSNKNTPSAQSPAYPVKATPSSTT 960

Query: 961  PGTANHSHNPSYVYPTPEIDIFAMSSNDSKSAKRRELINIDPEKFFYASLANXXXXXXSI 1020
            PGTANHSHNPSYVYPTPEIDIFAMSSNDSKSAKRRELINIDPEKFFYASLAN      SI
Sbjct: 961  PGTANHSHNPSYVYPTPEIDIFAMSSNDSKSAKRRELINIDPEKFFYASLANLLDLDDSI 1020

Query: 1021 VNNHDIMKTSPRLSNGKPAATSPLSPKTGGEWTSEVKALAITTSFKQVDLIRELANDDFI 1080
            VNNHDIMKTSPRLSNGKPAATSPLSPKTGGEWTSEVKALAITTSFKQVDLIRELANDDFI
Sbjct: 1021 VNNHDIMKTSPRLSNGKPAATSPLSPKTGGEWTSEVKALAITTSFKQVDLIRELANDDFI 1080

Query: 1081 SSSPMLAIQEVEEPQSVKREHDADDDLDSLFTNKKANLDGLDFDRYLYEPVSFDEWKDFV 1140
            SSSPMLAIQEVEEPQSVKREHDADDDLDSLFTNKKANLDGLDFDRYLYEPVSFDEWKDFV
Sbjct: 1081 SSSPMLAIQEVEEPQSVKREHDADDDLDSLFTNKKANLDGLDFDRYLYEPVSFDEWKDFV 1140

Query: 1141 VSSIQ 1145
            VSSIQ
Sbjct: 1141 VSSIQ 1145
>gi|1169834|sp|P32257|GALY_KLULA TRANSCRIPTION REGULATORY PROTEIN GAL11
 gi|101140|pir||S19033 transcription activator GAL11 - yeast (Kluyveromyces marxianus var.
           lactis) (fragment)
 gi|295684|gb|AAA35254.1| GAL11 transcription activator
          Length = 1008

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 48/127 (37%), Positives = 86/127 (67%), Gaps = 1/127 (0%)

Query: 598 LPPLTDEVKLRLRQLIEEVSRNNVVLRDVTSLLSNQDKTTVRDSMNRIQEQYGNVDSIIS 657
           +P  T++  L L++L  EV++N V L D+T+ L+N  K  +R  ++  Q+ + +V+S I 
Sbjct: 469 VPRPTEQDMLALKKLNAEVTKNPVKLNDITNRLTNDQKQQIRSKLHANQQLFSSVESFIP 528

Query: 658 YFYLLTKNGDGTKRLIQMKYMTKNILDNLHRGIYLAGPDLLEKVRSQYAKYFEYVKEQIN 717
             Y+LT+N +  ++L+Q++ +T+ I++   RG++L  P++++KV  +Y KY+EY KEQ+ 
Sbjct: 529 TLYMLTRNEEHIRQLLQIRMLTREIMEKAVRGVFLVEPNVVDKVIFRYQKYYEYTKEQL- 587

Query: 718 LRRQQVL 724
           LRRQQ L
Sbjct: 588 LRRQQQL 594
>gi|171550|gb|AAA34622.1| auxiliary activator
          Length = 1081

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/127 (31%), Positives = 76/127 (59%), Gaps = 2/127 (1%)

Query: 598 LPPLTDEVKLRLRQLIEEVSRNNVVLRDVTSLLSNQDKTTVRDSMNRIQEQYGNVDSIIS 657
           L P   +V++ ++QL  + S+ N+ L DVT+ LSN++K  ++  + + Q+ +  V +   
Sbjct: 504 LTPTAKDVEV-IKQLSLDASKTNLRLTDVTNSLSNEEKEKIKMKLKQGQKLFVQVSNFAP 562

Query: 658 YFYLLTKNGDGTKRLIQMKYMTKNILDNLHRGIYLAGPDLLEKVRSQYAKYFEYVKEQIN 717
             Y++TKN +  K + Q++   K IL+    GI++   D ++++  +Y KY+E ++ QI 
Sbjct: 563 QVYIITKNENFLKEVFQLRIFVKEILEKCAEGIFVVKLDTVDRLIIKYQKYWESMRIQI- 621

Query: 718 LRRQQVL 724
           LRRQ +L
Sbjct: 622 LRRQAIL 628
>gi|6324522|ref|NP_014591.1| Regulates transcription of a diverse array of genes. Required for
           mating and sporulation.; Gal11p [Saccharomyces
           cerevisiae]
 gi|2507028|sp|P19659|GALY_YEAST TRANSCRIPTION REGULATORY PROTEIN GAL11
 gi|2133177|pir||S66736 transcription activator GAL11 - yeast (Saccharomyces cerevisiae)
 gi|1419856|emb|CAA99056.1| ORF YOL051w [Saccharomyces cerevisiae]
          Length = 1081

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/127 (31%), Positives = 76/127 (59%), Gaps = 2/127 (1%)

Query: 598 LPPLTDEVKLRLRQLIEEVSRNNVVLRDVTSLLSNQDKTTVRDSMNRIQEQYGNVDSIIS 657
           L P   +V++ ++QL  + S+ N+ L DVT+ LSN++K  ++  + + Q+ +  V +   
Sbjct: 504 LTPTAKDVEV-IKQLSLDASKTNLRLTDVTNSLSNEEKEKIKMKLKQGQKLFVQVSNFAP 562

Query: 658 YFYLLTKNGDGTKRLIQMKYMTKNILDNLHRGIYLAGPDLLEKVRSQYAKYFEYVKEQIN 717
             Y++TKN +  K + Q++   K IL+    GI++   D ++++  +Y KY+E ++ QI 
Sbjct: 563 QVYIITKNENFLKEVFQLRIFVKEILEKCAEGIFVVKLDTVDRLIIKYQKYWESMRIQI- 621

Query: 718 LRRQQVL 724
           LRRQ +L
Sbjct: 622 LRRQAIL 628
>gi|7522544|pir||T39415 probable transcription regulator SPBC146.01 - fission yeast
           (Schizosaccharomyces pombe) (fragment)
 gi|5441483|emb|CAB46754.1| SPBC146.01 [Schizosaccharomyces pombe]
          Length = 445

 Score = 50.4 bits (119), Expect = 2e-04
 Identities = 24/82 (29%), Positives = 45/82 (54%)

Query: 635 KTTVRDSMNRIQEQYGNVDSIISYFYLLTKNGDGTKRLIQMKYMTKNILDNLHRGIYLAG 694
           K  +   +      +   + +I  FY LT N + T +LIQM+++ K  L+ L +G++   
Sbjct: 3   KVMIASLIKSAYPMFSRTNQLICLFYCLTGNEEATIQLIQMRHIFKLQLEGLQQGVFTCA 62

Query: 695 PDLLEKVRSQYAKYFEYVKEQI 716
           P  L K++ + ++YF +VK Q+
Sbjct: 63  PQTLAKIKEKTSRYFAFVKAQL 84
>gi|28071313|dbj|BAC56002.1| P0705A05.20 [Oryza sativa (japonica cultivar-group)]
          Length = 1359

 Score = 46.6 bits (109), Expect = 0.002
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 8/103 (7%)

Query: 2   NIPPNQNSLQQMGGGSNPNA--------SWRAMYSGEERQKVVQIIINTLTELHGSNPNF 53
           N  P Q +     GG +PNA         WR+    E R ++V  I++TL +    +   
Sbjct: 8   NWRPTQGADPAASGGIDPNAPAPALAGGDWRSQLQSEARNRIVNKIMDTLKKHLPVSVPE 67

Query: 54  NVQRLSKMAQDFEKLVYERSASKEDYLRAIKMKVHQLRVQKQQ 96
            +  L K+A  FE+ +Y  + S+ DYLR I +K+  +  + QQ
Sbjct: 68  GLNELQKIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQQ 110
>gi|24461860|gb|AAN62347.1|AF506028_14 CTV.20 [Poncirus trifoliata]
          Length = 3148

 Score = 41.6 bits (96), Expect = 0.086
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 11 QQMGGGSNPNASWRAMYSGEERQKVVQIIINTLT-ELHGSNPNFNVQRLSKMAQDFEKLV 69
          +Q G      + WR   S + RQ++V  I++TL   L  S P   +  L ++A  FE+ +
Sbjct: 5  RQKGVAMLDPSDWRNPLSHDSRQRIVNKIMDTLKRHLPFSGPE-GLNELKRIADRFEEKI 63

Query: 70 YERSASKEDYLRAIKMKVHQLRVQKQ 95
          +  + S+ DYLR I +K+  +  + Q
Sbjct: 64 FTSATSQSDYLRKISLKMLSMESRSQ 89
>gi|24461867|gb|AAN62354.1|AF506028_23 CTV.22 [Poncirus trifoliata]
          Length = 1405

 Score = 39.3 bits (90), Expect = 0.39
 Identities = 23/83 (27%), Positives = 42/83 (50%)

Query: 13  MGGGSNPNASWRAMYSGEERQKVVQIIINTLTELHGSNPNFNVQRLSKMAQDFEKLVYER 72
           +G  +     WR     + RQ++V  I++TL      +    +  L K+A  FE+ +Y  
Sbjct: 27  VGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTA 86

Query: 73  SASKEDYLRAIKMKVHQLRVQKQ 95
           ++S+ DYLR I +K+  +  + Q
Sbjct: 87  ASSQSDYLRKISLKMLSMESKSQ 109
>gi|15218294|ref|NP_173030.1| expressed protein [Arabidopsis thaliana]
          Length = 1335

 Score = 38.1 bits (87), Expect = 0.87
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 23 WRAMYSGEERQKVVQIIINTLTE-LHGSNPNFNVQRLSKMAQDFEKLVYERSASKEDYLR 81
          WR     + RQK+V  I+ TL + L  S P   +  L ++A  FE+ ++  + ++ DYLR
Sbjct: 22 WRTQLPPDSRQKIVNKIMETLKKHLPFSGPE-GINELRRIAARFEEKIFSGALNQTDYLR 80

Query: 82 AIKMKVHQLRVQKQQIA 98
           I MK+  +  + Q  A
Sbjct: 81 KISMKMLTMETKSQNAA 97
  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Jun 25, 2003  2:03 AM
  Number of letters in database: 468,613,799
  Number of sequences in database:  1,459,100
  
Lambda     K      H
   0.312    0.129    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 615,238,911
Number of Sequences: 1459100
Number of extensions: 19944805
Number of successful extensions: 46678
Number of sequences better than  1.0: 11
Number of HSP's better than  1.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 46637
Number of HSP's gapped (non-prelim): 32
length of query: 1145
length of database: 468,613,799
effective HSP length: 135
effective length of query: 1010
effective length of database: 271,635,299
effective search space: 274351651990
effective search space used: 274351651990
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 87 (38.1 bits)