[Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Ver_Dr_NP_956774.1 (358 letters) Database: /data/curated/sequences/fasta/proteomes/nr_So.fa 5,742,111 sequences; 1,979,780,658 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Dan... 662 0.0 gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 ligh... 414 e-114 gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein... 412 e-113 gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light int... 411 e-113 gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermed... 410 e-113 gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light inter... 410 e-113 gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein... 410 e-112 gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain is... 405 e-111 gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain i... 404 e-111 gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 lig... 400 e-110 gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] 400 e-110 gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermed... 399 e-109 gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon n... 393 e-108 gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermed... 388 e-106 gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chai... 382 e-104 gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] 379 e-103 gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] 372 e-101 gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 ... 371 e-101 gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibencla... 352 2e-95 gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [S... 323 1e-86 gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella... 322 2e-86 gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chai... 303 9e-81 gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 ligh... 254 8e-66 gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermedi... 229 2e-58 gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated fa... 218 4e-55 gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae s... 204 9e-51 gi|157119433|ref|XP_001653379.1| conserved hypothetical protein ... 203 1e-50 gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [... 189 3e-46 gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermed... 187 1e-45 gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain i... 186 3e-45 gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 ... 185 4e-45 gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] 179 3e-43 gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melano... 176 2e-42 gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoob... 166 2e-39 gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermedia... 155 3e-36 gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00... 153 2e-35 gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Tr... 149 2e-34 gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_002... 147 1e-33 gi|115690607|ref|XP_001202918.1| PREDICTED: similar to Dynein, c... 145 3e-33 gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermedi... 139 2e-31 gi|57092883|ref|XP_531798.1| PREDICTED: similar to dynein 2 ligh... 139 3e-31 gi|26252194|gb|AAH40558.1| DYNC2LI1 protein [Homo sapiens] 139 4e-31 gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Tr... 127 9e-28 gi|146097038|ref|XP_001468017.1| dynein light intermediate chain... 125 3e-27 gi|157874331|ref|XP_001685649.1| dynein light intermediate chain... 120 2e-25 gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light int... 118 7e-25 gi|154343515|ref|XP_001567703.1| dynein light intermediate chain... 118 7e-25 gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Tr... 105 4e-21 gi|123423641|ref|XP_001306418.1| conserved hypothetical protein ... 99 3e-19 gi|158597036|gb|EDP35273.1| dynein 2 light intermediate chain, p... 87 2e-15 gi|158599820|gb|EDP37275.1| hypothetical protein Bm1_12090 [Brug... 85 9e-15 gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT0000... 66 3e-09 gi|123415018|ref|XP_001304608.1| conserved hypothetical protein ... 65 6e-09 gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT0001... 64 1e-08 gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [G... 62 5e-08 gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin li... 59 5e-07 gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein... 59 5e-07 gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light int... 58 1e-06 gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light interme... 58 1e-06 gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein li... 57 2e-06 gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light ... 57 3e-06 gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light int... 56 3e-06 gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon n... 56 3e-06 gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light int... 56 4e-06 gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] 56 4e-06 gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermed... 56 4e-06 gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermedi... 56 5e-06 gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light inter... 55 6e-06 gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [D... 55 7e-06 gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light inte... 55 8e-06 gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light ... 55 9e-06 gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermed... 54 1e-05 gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo s... 54 1e-05 gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A is... 54 2e-05 gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculu... 54 2e-05 gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light inte... 54 2e-05 gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermed... 54 2e-05 gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light ... 54 2e-05 gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] 54 2e-05 gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermed... 53 3e-05 gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo s... 53 3e-05 gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light interme... 53 3e-05 gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] 53 4e-05 gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella... 52 5e-05 gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermedi... 52 5e-05 gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 ... 52 6e-05 gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermed... 52 8e-05 gi|157863075|gb|ABV90642.1| cytoplasmic dynein light intermediat... 52 9e-05 gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon n... 51 9e-05 gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [S... 50 2e-04 gi|123390419|ref|XP_001299882.1| small GTP-binding protein, puta... 48 8e-04 gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic,... 48 8e-04 gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin li... 48 9e-04 gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-interm... 48 0.001 gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] 47 0.001 gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-interm... 47 0.002 gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 ... 47 0.003 gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light... 46 0.003 gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosoph... 46 0.003 gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein li... 46 0.003 gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate ... 46 0.004 gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light inte... 46 0.004 gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] 46 0.004 gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [... 46 0.004 gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain fam... 46 0.005 gi|71401049|ref|XP_803244.1| dynein light intermediate chain [Tr... 45 0.006 gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A... 45 0.006 gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoob... 45 0.008 gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938... 45 0.009 gi|124783774|gb|ABN14940.1| dynein light chain-A variant [Taenia... 44 0.014 gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Di... 44 0.016 gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] 43 0.028 gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT0003... 43 0.039 gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermedi... 42 0.043 gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermed... 42 0.045 gi|146164455|ref|XP_001013126.2| Ras family protein [Tetrahymena... 42 0.063 gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, is... 42 0.072 gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain fam... 42 0.077 gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] 40 0.29 gi|45190737|ref|NP_984991.1| AER132Wp [Ashbya gossypii ATCC 1089... 40 0.33 gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00... 39 0.37 gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT0003... 39 0.39 gi|154279596|ref|XP_001540611.1| conserved hypothetical protein ... 38 1.0 gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae s... 38 1.1 gi|157128066|ref|XP_001661298.1| dynein light intermediate chain... 38 1.2 gi|158602493|gb|EDP38908.1| dynein light intermediate chain, put... 38 1.2 gi|45387873|ref|NP_991296.1| RAB, member of RAS oncogene family-... 37 1.6 gi|157818459|ref|NP_001035505.1| breast cancer and salivary glan... 36 3.5 gi|149731285|ref|XP_001502422.1| PREDICTED: hypothetical protein... 36 4.9 gi|38257945|sp|Q86YQ2|LATH_HUMAN Latherin precursor (Breast canc... 36 5.0 gi|70732320|ref|YP_262076.1| DNA-binding response regulator [Pse... 35 6.9 gi|50303633|ref|XP_451758.1| unnamed protein product [Kluyveromy... 35 7.2 gi|17542952|ref|NP_501609.1| RAB family member (rab-28) [Caenorh... 35 7.4 gi|149568878|ref|XP_001508253.1| PREDICTED: hypothetical protein... 35 7.4 gi|71018751|ref|XP_759606.1| hypothetical protein UM03459.1 [Ust... 35 8.8 gi|156717510|ref|NP_001096295.1| hypothetical protein LOC1001248... 35 9.1 gi|126325747|ref|XP_001363389.1| PREDICTED: hypothetical protein... 35 9.4 >gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Danio rerio] gi|32766386|gb|AAH55198.1| Zgc:63673 [Danio rerio] Length = 358 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 358/358 (100%), Positives = 358/358 (100%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL Sbjct: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV Sbjct: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI Sbjct: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF Sbjct: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF Sbjct: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 Query: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP Sbjct: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 >gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 2 [Canis familiaris] Length = 348 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 214/354 (60%), Positives = 264/354 (74%), Gaps = 11/354 (3%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R S D E E ++VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGSEGDGLEIGE--------KSVFFIGSKNGGKTTIILRCLDRDEP 54 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHN PKDIAH WELGGG SL DL+ IPIT+DN+ S+VLVLDL Sbjct: 55 PKPTLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTFSIVLVLDL 114 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN LW TME+LL + ++ V+K+ L KT +Q++ + KD+PDREL+ PF Sbjct: 115 SKPNDLWPTMENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPF 174 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 +PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 175 LIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKVRGVINQ 233 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSI D +KPL I AG DSLSQIG P + DIG LHA +P DLWKKV+E+V Sbjct: 234 LAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERV 293 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +ST K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 294 FPPKSTNTLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWKQIELD 347 >gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein [Equus caballus] Length = 351 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 211/354 (59%), Positives = 266/354 (75%), Gaps = 8/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 SDTLW+IA AEV R S E + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SDTLWEIAKAEVEKRGSNGSESDGVE-----IGEKSVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GR+A+GHN PKDIAH WELGGG SL DL+ IPIT+D + S+VLVLDL Sbjct: 58 PKPTLALEYTYGRKAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN LW TME+LL + ++ V KV L K S +Q++ + KD+PDRE+I PF Sbjct: 118 SKPNDLWPTMENLLQATKSHVNKVIMKLGKKNSKASSEMRQKIWSNMQKDHPDREIIDPF 177 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P+PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 178 PIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIRGVINQ 236 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSI D +KPL I AG DSLSQIG P + DIG LHA++P +LWKKV+E++ Sbjct: 237 LAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMELWKKVYERL 296 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP ++T K++KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 297 FPPKNTNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] gi|81673547|gb|AAI09911.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] Length = 351 Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats. Identities = 212/354 (59%), Positives = 265/354 (74%), Gaps = 8/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R S +E + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGSSENEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRR +GHN PKDIAH WELGGG SL DL+ IPIT+D + S+VLVLDL Sbjct: 58 PKPTLALEYTYGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN LW TME+LL + + ++KV L K + +Q++ + KD+PDREL+ PF Sbjct: 118 SKPNDLWPTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKDHPDRELLDPF 177 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P+PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 178 PIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIRGVINQ 236 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG + KSI D +KPL I AG DSLSQIGPP + DIG LHA++P DLWKKV+EK+ Sbjct: 237 LAFGINKSKSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDLWKKVYEKL 296 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +S K++KDP KDPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 297 FPPKSINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|20988526|gb|AAH30450.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|24659541|gb|AAH39070.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 351 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 210/354 (59%), Positives = 264/354 (74%), Gaps = 8/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R S E + E +++VFF+GSK GGKTTI+LR L+RDE+ Sbjct: 3 SETLWEIAKAEVEKRRSHGSEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCLDRDES 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDL Sbjct: 58 AKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN LW TME+LL + ++ V+KV L KT S +QR+ V+ KD+PDRELI PF Sbjct: 118 SKPNDLWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDPF 177 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 178 PIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIRGVINQ 236 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P +LWKKV++K+ Sbjct: 237 LAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKL 296 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +ST K ++DP +DPQ++E +D +R QKDQEL+ YKR +K+WK + LD Sbjct: 297 FPPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWKQIELD 350 >gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light intermediate chain isoform 1 [Pan troglodytes] Length = 351 Score = 410 bits (1054), Expect = e-113, Method: Composition-based stats. Identities = 211/354 (59%), Positives = 264/354 (74%), Gaps = 8/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT+D + S+VLVLDL Sbjct: 58 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PDRELI PF Sbjct: 118 SKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDPF 177 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 PVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 178 PVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIRGVINQ 236 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK+ Sbjct: 237 LAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKL 296 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +S K++KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 297 FPPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 387 Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 212/354 (59%), Positives = 267/354 (75%), Gaps = 8/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 SDTLW+IA AEV RE + + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 39 SDTLWEIAKAEVEKREISENGGDGAE-----VCEKSVFFIGSKNGGKTTIILRCLDRDEP 93 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT +++ S+VLVLDL Sbjct: 94 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITNESLRTFSLVLVLDL 153 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN LW TMESLL + V+K+ L KT + +Q++ + KD+PDRELI PF Sbjct: 154 SKPNDLWPTMESLLQVTKAHVDKLIMKLGKTSTKAASEMRQKMWSNMQKDHPDRELIDPF 213 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P+PL+I+GSK+DIFQDFDSEKRK+ICKTLRF++H+YGASL+F +SKSE + K R INQ Sbjct: 214 PIPLVIIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMF-ASKSEALLLKIRGVINQ 272 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSIS D +KPL IPAG DSLSQIG P +E +IG LHA+ P +LWKKV+EKV Sbjct: 273 LAFGIDKSKSISVDQNKPLFIPAGLDSLSQIGSPPLSENEIGKLHAQTPMELWKKVYEKV 332 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +S KE +DP +DPQ++E +D +RAQKDQEL+QYK+ +KSWK + D Sbjct: 333 FPPKSANTSKETRDPARDPQYAESEVDEMRAQKDQELEQYKKNTSKSWKQIEFD 386 >gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain isoform 1 variant [Homo sapiens] Length = 351 Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 209/354 (59%), Positives = 261/354 (73%), Gaps = 8/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDL Sbjct: 58 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD ELI PF Sbjct: 118 SKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPF 177 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 PVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 178 PVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKLRGVINQ 236 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK+ Sbjct: 237 LAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKL 296 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 297 FPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 350 >gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain isoform 1 [Homo sapiens] gi|19908231|gb|AAL99216.1| dynein 2 light intermediate chain [Homo sapiens] gi|119620696|gb|EAX00291.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_c [Homo sapiens] Length = 351 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 209/354 (59%), Positives = 260/354 (73%), Gaps = 8/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDL Sbjct: 58 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD ELI PF Sbjct: 118 SKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPF 177 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 PVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 178 PVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIRGVINQ 236 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK+ Sbjct: 237 LAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKL 296 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 297 FPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 350 >gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 light intermediate chain [Gallus gallus] Length = 637 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 204/360 (56%), Positives = 264/360 (73%), Gaps = 9/360 (2%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPK + DTLWDIA EV RE+ D+ + E +++V FMGSK GGKTTI+LR L Sbjct: 284 MPK-AGDTLWDIARDEVEKRENNGDDGKRVE-----VCEKSVLFMGSKNGGKTTIILRCL 337 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 ER+E KPTL LEYTFGRRAR HN PKDIAH WE+GGG SL +L++IPIT +N+ +VV Sbjct: 338 EREEVPKPTLVLEYTFGRRARRHNAPKDIAHFWEIGGGTSLLELIRIPITVNNIRSFAVV 397 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + RN V K+ A L+KT + KQ++ L +D+PD + Sbjct: 398 LVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKTDPEVAAEIKQKMQNNLQRDHPDYD 457 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 L+ PFP+PL+I+GSK+DIF +FDSE RK+I +TLRF++H+YGASL+FT SKSE + K+R Sbjct: 458 LVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRFVSHYYGASLVFT-SKSEALLLKAR 516 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 + IN LAFG +R KS+S D SKPL IPAG DSLSQIGPP ++ +IG + A P +LWKK Sbjct: 517 ALINHLAFGYDRSKSVSVDHSKPLFIPAGLDSLSQIGPPPTSDSNIGKMRANTPLELWKK 576 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 VFEK FP S + ++ KDP + Q++E +D +RAQK+QE +QYKR +KSWK + DP Sbjct: 577 VFEKTFPPRSFSDLQDSKDPAQVSQYAEYEVDVMRAQKNQEFEQYKRNASKSWKEMDFDP 636 >gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] Length = 350 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 208/354 (58%), Positives = 260/354 (73%), Gaps = 9/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDL Sbjct: 58 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLH--KDYPDRELISPF 183 SKPN LW TME+LL + ++ V+KV L KT + R ++ + +D+PD ELI PF Sbjct: 118 SKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMR-QKIWNYAEDHPDHELIDPF 176 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 PVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 177 PVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIRGVINQ 235 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK+ Sbjct: 236 LAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKL 295 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 296 FPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 349 >gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|62822153|gb|AAY14702.1| unknown [Homo sapiens] gi|119620694|gb|EAX00289.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 352 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 209/355 (58%), Positives = 260/355 (73%), Gaps = 9/355 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDL Sbjct: 58 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYP-DRELISP 182 SKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+P D ELI P Sbjct: 118 SKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPQDHELIDP 177 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R IN Sbjct: 178 FPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIRGVIN 236 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK Sbjct: 237 QLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEK 296 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 297 LFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 351 >gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 213/364 (58%), Positives = 258/364 (70%), Gaps = 13/364 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPK+SSDTLWD+AAAEV SRES D E + +RTVF MGSKAGGKT+ILL+ L Sbjct: 1 MPKISSDTLWDLAAAEVNSRESEDDYGER-----NVAVERTVFLMGSKAGGKTSILLKCL 55 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE +KPTLALEYTFGRRARGHNTPKDIAH+WELGGG LSDLVQIPIT+ ++ FLSV+ Sbjct: 56 DRDEPSKPTLALEYTFGRRARGHNTPKDIAHIWELGGGTFLSDLVQIPITSADLKFLSVI 115 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------SGKQRVPRVLHKDY 174 L++DLSKPN LW T E LL + +EK + QK ++ + Q RVL DY Sbjct: 116 LIVDLSKPNELWGTTEKLLQVTQAHLEKAFSMAQKAQTAKPAATHQTATQSAARVLPADY 175 Query: 175 PDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFT-SSKSETT 233 PDRELIS FPVPLLIVGSK+DIFQ+FDS+K+K+I + LRF+AH Y ASLI Sbjct: 176 PDRELISAFPVPLLIVGSKYDIFQEFDSDKKKLIAQMLRFVAHSYAASLIVIHQXXXXXX 235 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 K++S D +KPL IPAGSDS SQIG P A +VDI +LHA+NP Sbjct: 236 XXXXXXXXXXXXXXXXXXKTVSMDLTKPLIIPAGSDSFSQIGSPCAADVDIASLHARNPK 295 Query: 294 DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKS 353 DLW+KV VFP E +++LKDP KDPQ+SEP ID++RAQKDQEL+QYKR AK+W+ Sbjct: 296 DLWRKVCGCVFPPEK-EHQQDLKDPAKDPQYSEPQIDAMRAQKDQELEQYKRNAAKTWQG 354 Query: 354 LALD 357 L L+ Sbjct: 355 LDLE 358 >gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermediate chain isoform 2 [Pan troglodytes] Length = 334 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 200/337 (59%), Positives = 250/337 (74%), Gaps = 8/337 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT+D + S+VLVLDL Sbjct: 58 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PDRELI PF Sbjct: 118 SKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDPF 177 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 PVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 178 PVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIRGVINQ 236 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK+ Sbjct: 237 LAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKL 296 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQEL 340 FP +S K++KDP +DPQ++E +D +R QKDQ L Sbjct: 297 FPPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQVL 333 >gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chain isoform 3 [Homo sapiens] Length = 334 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 197/334 (58%), Positives = 245/334 (73%), Gaps = 8/334 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDL Sbjct: 58 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD ELI PF Sbjct: 118 SKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPF 177 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 PVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 178 PVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIRGVINQ 236 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK+ Sbjct: 237 LAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKL 296 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKD 337 FP +S K++KDP +DPQ++E +D +R QKD Sbjct: 297 FPPKSINTLKDIKDPARDPQYAENEVDEMRIQKD 330 >gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] Length = 341 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 194/333 (58%), Positives = 247/333 (74%), Gaps = 8/333 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV+ R S E + E ++++FF+GSK GGKTTI+LR L+RDE+ Sbjct: 3 SETLWEIAKAEVQKRRSHGSEGDGAE-----IGEKSLFFIGSKNGGKTTIILRCLDRDES 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDL Sbjct: 58 AKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN W TME+LL + ++ V+KV L KT S +QR+ V+ KD+PDRELI PF Sbjct: 118 SKPNDHWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDPF 177 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 178 PIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIRGVINQ 236 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P +LWKKV++K+ Sbjct: 237 LAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKL 296 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQK 336 FP +ST K ++DP +DPQ++E +D +R + Sbjct: 297 FPPKSTGTLKAVQDPARDPQYAESEVDEMRGSE 329 >gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] Length = 318 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 188/311 (60%), Positives = 236/311 (75%), Gaps = 4/311 (1%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKD 88 +E + A F ++++VFF+GSK GGKTTI+LR L+RDE KPTLALEYT+GRRA+GHNTPKD Sbjct: 6 SEGDGAEF-AEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRAKGHNTPKD 64 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 IAH WELGGG SL DL+ IPIT D + S+VLVLDLSKPN LW TME+LL + ++ V+K Sbjct: 65 IAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDK 124 Query: 149 VCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRK 206 V L KT +Q++ + KD+PD ELI PFPVPL+I+GSK+D+FQDF+SEKRK Sbjct: 125 VIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQDFESEKRK 184 Query: 207 VICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA 266 VICKTLRF+AH+YGASL+FT SKSE + K R INQLAFG ++ KSI D +KPL I A Sbjct: 185 VICKTLRFVAHYYGASLMFT-SKSEALLLKLRGVINQLAFGIDKSKSICVDQNKPLFITA 243 Query: 267 GSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSE 326 G DS QIG P E DIG LHA +P +LWKKV+EK+FP +S K++KDP +DPQ++E Sbjct: 244 GLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPARDPQYAE 303 Query: 327 PLIDSIRAQKD 337 +D +R QKD Sbjct: 304 NEVDEMRIQKD 314 >gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 [Macaca mulatta] Length = 365 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 199/359 (55%), Positives = 255/359 (71%), Gaps = 8/359 (2%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 +P+ +TLW+IA AEV R E + E +++VFF+GSK GGKTTI+LR L Sbjct: 12 VPQKIIETLWEIAKAEVEKRGINGSEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCL 66 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RD K L L ++F G +TPKDIAH WELGGG SL DL+ +PIT+D + S+V Sbjct: 67 DRDRPPKMVLFLFFSFSFCHPGWSTPKDIAHFWELGGGTSLLDLISVPITSDTLRTFSLV 126 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+K+ L KT + +Q++ + KD+PDRE Sbjct: 127 LVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNPKAASEMRQKIWNNMQKDHPDRE 186 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+DIFQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 187 LIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 245 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS SQIG P E DIG LHA +P +LWKK Sbjct: 246 GVINQLAFGIDKSKSICVDQNKPLLITAGLDSFSQIGSPPVPENDIGKLHAHSPMELWKK 305 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 306 VYEKLFPPKSINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 364 >gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibenclamide-sensitive voltage-gated potassium channel, partial [Ornithorhynchus anatinus] Length = 449 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 186/343 (54%), Positives = 244/343 (71%), Gaps = 16/343 (4%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +TLW+IA AEV +E +E E ++VFF+GSK GGKTTI+LR L+RDE A Sbjct: 1 ETLWEIARAEVEKKEKPGGGDEGE---------KSVFFVGSKNGGKTTIILRCLDRDEPA 51 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 +PTLALEYTFGRRARGHNTPKDIAH WELGGG SL DL +IPITAD++ + + LDLS Sbjct: 52 RPTLALEYTFGRRARGHNTPKDIAHFWELGGGTSLLDLARIPITADSLRTFATDIFLDLS 111 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVP 186 +P+ LW T E LL + R VE L + G + R + +D+PDRE I PFP+P Sbjct: 112 RPSELWLTAEHLLRAVRTHVEN----LGQPGTRAAATPRTWSPVPEDHPDREFIDPFPIP 167 Query: 187 LLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 L+I+GSK+D+FQ+ DSEKRKVIC+TLRFLAH +GA+L+FT KSE + K+RS I+ LAF Sbjct: 168 LVIIGSKYDVFQNLDSEKRKVICRTLRFLAHHHGATLMFT-GKSEALLLKTRSVISHLAF 226 Query: 247 --GTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVF 304 G +R K+++ D +KPL IPAG DS SQIGPP + DIG L + P +LWK+V+ K F Sbjct: 227 GVGVDRSKALTLDQNKPLFIPAGLDSFSQIGPPPSAAGDIGKLRVQTPLELWKEVYNKAF 286 Query: 305 PHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 P ++ +RK+LKDP +DPQ++E +D++RAQKDQ + +R Q Sbjct: 287 PLQTKSDRKDLKDPGRDPQYAEREVDAMRAQKDQRKKRRERGQ 329 >gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115941395|ref|XP_001177851.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 363 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 163/348 (46%), Positives = 244/348 (70%), Gaps = 7/348 (2%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 ++WDIA E + + +E+ E S+ + F+GSK GKT+I+LRFLE++E K Sbjct: 8 SIWDIAILEAEQKHATESKEQGGEAKG---SENHILFIGSKNAGKTSIILRFLEKEEAPK 64 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 PT+ALEYTFGRRA+GHN KDI H+WELGGG LS L +IP++ D + S+++V+DLS+ Sbjct: 65 PTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDLSQ 124 Query: 128 PNALWETMESLLGSARNQVEKVC--AALQKTGESRSGKQRVPRVLHKDYPDRELISPFPV 185 P LW TME+L+ A + VE+V AA K+R + + D+PDR+++ PFP+ Sbjct: 125 PYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHPDRDMLDPFPL 184 Query: 186 PLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLA 245 PL+IVG+K+D++QDFD EKRKVI KTLRF+AH YGA+L F+S+K++ MS++++ ++ LA Sbjct: 185 PLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTKNLVSHLA 244 Query: 246 FGTERP-KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVF 304 FGT K+IS DP+KP+++P G DSL QIG P + D+G +A+ P DLWK+ F F Sbjct: 245 FGTTLSLKTISIDPNKPISVPFGLDSLEQIGLPPVADDDLGRSNARTPLDLWKQAFTSYF 304 Query: 305 PHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 P +ST + ++DP KDPQ++E +D++R QK++EL++Y+++ + K Sbjct: 305 PQKSTI-KAIVEDPSKDPQYAEAAVDNMREQKNKELERYRKQAERRAK 351 >gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella vectensis] gi|156226126|gb|EDO46938.1| predicted protein [Nematostella vectensis] Length = 366 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 165/358 (46%), Positives = 232/358 (64%), Gaps = 5/358 (1%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 K S T+WD+A E + ++ +E H + +F +GSK GKT+++LRFL+R Sbjct: 4 KRSDKTIWDLAIEERDYLLNEAKKKGTQESSPH-GEEAGIFLIGSKNAGKTSMVLRFLDR 62 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 DE KPT AL+YTFGR+A+GHN KD+ H+WELGGG LS L+ IPI D+V LS+++ Sbjct: 63 DEVPKPTTALDYTFGRKAKGHNIAKDVGHIWELGGGTFLSKLIDIPINVDSVRGLSIIIF 122 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQR--VPRVLHKDYPDRELI 180 LDLS PN LW TME+LL + +V KV L S K R D+PD+ + Sbjct: 123 LDLSLPNELWHTMETLLNQVKKRVHKVMDELAAKNPSAVQKLRNDAWEKFGTDHPDKSFV 182 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 PFP+PL IVG K+DI+QDFD EKRK+I + LRF+AH GA L F S+K+E + +SR Sbjct: 183 EPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGRSRGM 242 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG-PPVATEVDIGTLHAKNPFDLWKKV 299 I L F T K+I D +KP+ + AG DSL+QIG PPVA+E D+G L ++NP+DLWK Sbjct: 243 IGHLLFHTSLGKAIGVDHNKPIIVSAGQDSLAQIGAPPVASE-DLGRLQSRNPYDLWKAA 301 Query: 300 FEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 + FP E +++ + +DP KDPQ+ E +D++R QKD+ELD+Y+R+ + + ++ D Sbjct: 302 YATFFPPEKSKQHSDREDPSKDPQYFEAAVDAMRKQKDEELDRYRRQAERKAREMSRD 359 >gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chain [Rattus norvegicus] gi|50927372|gb|AAH79201.1| Dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 311 Score = 303 bits (777), Expect = 9e-81, Method: Composition-based stats. Identities = 151/247 (61%), Positives = 186/247 (75%), Gaps = 8/247 (3%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R + + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRRCHGSDGDGME-----IGEKSVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDL Sbjct: 58 AKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPF 183 SKPN LW TME+LL + ++ V+KV L K S +QR+ V+ KD+PDRELI PF Sbjct: 118 SKPNDLWPTMENLLQATKSHVDKVTMKLGKANSKASSEMRQRMWSVMQKDHPDRELIDPF 177 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQ Sbjct: 178 PIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKMRGVINQ 236 Query: 244 LAFGTER 250 LAFG ++ Sbjct: 237 LAFGIDK 243 >gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 3 [Canis familiaris] Length = 225 Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats. Identities = 130/225 (57%), Positives = 167/225 (74%), Gaps = 3/225 (1%) Query: 135 MESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYPDRELISPFPVPLLIVGS 192 ME+LL + ++ V+K+ L KT +Q++ + KD+PDREL+ PF +PL+I+GS Sbjct: 1 MENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIPLVIIGS 60 Query: 193 KFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 K+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R INQLAFG ++ K Sbjct: 61 KYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKVRGVINQLAFGIDKSK 119 Query: 253 SISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRER 312 SI D +KPL I AG DSLSQIG P + DIG LHA +P DLWKKV+E+VFP +ST Sbjct: 120 SICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVFPPKSTNTL 179 Query: 313 KELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 180 KHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWKQIELD 224 >gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 233 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 111/182 (60%), Positives = 140/182 (76%), Gaps = 1/182 (0%) Query: 176 DRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMS 235 DRELI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FTS KSE + Sbjct: 52 DRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTS-KSEALLL 110 Query: 236 KSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDL 295 K R INQLAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P +L Sbjct: 111 KIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMEL 170 Query: 296 WKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLA 355 WKKV++K+FP +ST K ++DP +DPQ++E +D +R QKDQEL+ YKR +K+WK + Sbjct: 171 WKKVYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWKQIE 230 Query: 356 LD 357 LD Sbjct: 231 LD 232 >gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated family member (xbx-1) [Caenorhabditis elegans] gi|77799271|emb|CAB01645.2| Hypothetical protein F02D8.3 [Caenorhabditis elegans] Length = 370 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 125/354 (35%), Positives = 206/354 (58%), Gaps = 21/354 (5%) Query: 9 LWDIAAAEVRSRESRT-------DEEEAEEEDAHFPSQRT-----VFFMGSKAGGKTTIL 56 +WD+A ++ + R D+E + D + R + F G++ GK++ + Sbjct: 3 IWDLAKQKLVENKQRAAELKQKLDDENGTQSDNYLSEVRRRHESHIIFAGNRKSGKSSFM 62 Query: 57 LRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSF 116 L FLER E K ++ LEYT+ RR RG+ KDIA+LWELGGG ++++L+ +PIT NV Sbjct: 63 LNFLERKEDLKDSVGLEYTYARRTRGN--VKDIANLWELGGGATVTELLSVPITMKNVEI 120 Query: 117 LSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD 176 S++L+LD++ + +W T+E + S R VE + ++R ++ R+ D Sbjct: 121 CSLILLLDMTNLDEMWITIEKTVDSVRRLVENL-ERQDINLQTRLAEKMRLRLEKYDDGS 179 Query: 177 RELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSK 236 ++ +P P+P+ IV SK+D FQ+F+SEKR+ +C+ LRFLA+ YGA+L+ SS+ E Sbjct: 180 LKMCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPKL 239 Query: 237 SRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLW 296 ++ + AFGT P+ TD +KP+ + G DSL IG P A++ +G A +PF+LW Sbjct: 240 VKNMTSHFAFGTVCPQGYMTDHNKPMFVKCGFDSLESIGIPPASDNFMG---ASSPFNLW 296 Query: 297 KKVFEKVFPHESTR---ERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 ++ F ++P ++ E + +DP+ DP F EP ID++ K +EL + R + Sbjct: 297 RESFISLWPQKTGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKELKNHIRSK 350 >gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae str. PEST] gi|116118470|gb|EAA13896.3| AGAP010165-PA [Anopheles gambiae str. PEST] Length = 339 Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 125/340 (36%), Positives = 192/340 (56%), Gaps = 26/340 (7%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 +++T+ DIA V T++ E A P++RT+F +GSK GK+T++ RFL+RD+ Sbjct: 5 TTETIQDIAIKLV------TEQLRNESRLATTPTERTLFVLGSKGVGKSTLINRFLDRDD 58 Query: 65 TAKPTLALEYTFGRR-ARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVL 123 +PTLALEY+FGR+ A G K+I ++WELG + S L+++PI + + S +++L Sbjct: 59 VPRPTLALEYSFGRKTASGQGAQKNICNVWELGSLANSSQLIEMPIRSHGLQTFSCIVML 118 Query: 124 DLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPF 183 DLS+P+ LW +ES+L + K A G+ K+ + + K++PD + F Sbjct: 119 DLSQPDRLWTDLESVLNGLKQATAKHAVA----GQIEEMKELTAQRIGKEHPDLSTLELF 174 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P P++IVG K+DI+Q+ DSE RK +C+ LR +AH GA+L++ S+K+ + R +N Sbjct: 175 PFPIVIVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRDTMNH 234 Query: 244 LAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFE 301 L FG+ ++ S D S PLAIP G+DS ++IG + IG F Sbjct: 235 LGFGSPSNPFRAASFDHSSPLAIPFGADSWARIGVTPSNSERIGL------------SFS 282 Query: 302 KVFPHESTRERKEL-KDPVKDPQFSEPLIDSIRAQKDQEL 340 P L DP KD F E ID +R+QKD+EL Sbjct: 283 TQIPQLPIGNGGILPDDPAKDAGFKEASIDELRSQKDEEL 322 >gi|157119433|ref|XP_001653379.1| conserved hypothetical protein [Aedes aegypti] gi|108883162|gb|EAT47387.1| conserved hypothetical protein [Aedes aegypti] Length = 347 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 119/343 (34%), Positives = 190/343 (55%), Gaps = 25/343 (7%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 M +++T+ DIA V T+ + E P++RT+F +GSK GK+T++ RFL Sbjct: 10 MEPDTTETIQDIAMKLV------TEHMKQESSLTGGPTERTIFVLGSKGAGKSTLINRFL 63 Query: 61 ERDETAKPTLALEYTFGRR-ARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 +RD+ +PTLALEY+FGRR A G K+I ++WELG ++ + L+++P+ + ++ + Sbjct: 64 DRDDITRPTLALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAAFAA 123 Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 V+VLDLS+P+ LW ++ +L + + K C+ + + KQ+V D+ D Sbjct: 124 VIVLDLSQPDRLWTDLQCILNGLKQAISKNCSPKEVSEMQERMKQKVGL----DHEDLNT 179 Query: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 + P P++IVG K+D FQ+ DSE +K +C+ LR ++H GA+LIF +SK+ + R Sbjct: 180 LEILPFPVIIVGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRD 239 Query: 240 FINQLAFGT-ERP-KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 +N L FG+ P K+ + D + P+ +P G DS +IG IG ++ Sbjct: 240 AMNHLGFGSPSNPFKATALDHNGPIVVPFGGDSWEKIGVTPTNSERIGMSYSAQ------ 293 Query: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQEL 340 P T + DP KD F E +ID +RAQKD EL Sbjct: 294 ------IPQVGTEKVSIPDDPAKDGGFKERVIDELRAQKDDEL 330 >gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] gi|39583371|emb|CAE66345.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] Length = 366 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 196/350 (56%), Gaps = 17/350 (4%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSK--------AGGKTTILLRFL 60 +WD+A ++ + R E E + +D + + AG + I+ Sbjct: 3 IWDLAKQKLVENKQRAAELEQKLDDENGAVNDNYLAEVRRRHESHIIIAGNRQIIIHVEF 62 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 E + LE+T+ RR RG+ KD+A+LWELGGG S+++L+ +PITA NV S++ Sbjct: 63 SGAERRFERIGLEFTYARRTRGN--VKDVANLWELGGGSSVTELLSVPITAKNVETCSLI 120 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 ++LD++ + +W T+E + + R VE + ++R ++ R+ + ++ Sbjct: 121 VLLDMTNLSEMWITIEKTVDTVRRLVENL-ERQDANLQTRMAEKSRLRLEKYESSSLKMC 179 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 +P P+P+ IV +K+D FQ+F+SEKR+ +C+ LRFLA+ YGA+L+ SS+ E ++ Sbjct: 180 APCPLPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPKLVKNM 239 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 I+ AFGT P+ TD +KP+ I G D+L IG P ++ +G A +PF+LW++ F Sbjct: 240 ISHFAFGTVCPQGYITDHNKPMFIKCGFDNLEAIGIPPGSDNFMG---ASSPFNLWRESF 296 Query: 301 EKVFPHESTR---ERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 ++P ++ E + +DP+ DP F EP ID++ K +EL+ + R + Sbjct: 297 ISLWPQKTGNVDVEDTKKQDPMIDPVFKEPSIDNLVEIKRKELENHIRSK 346 >gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] Length = 201 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 96/172 (55%), Positives = 121/172 (70%), Gaps = 7/172 (4%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 +KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDL Sbjct: 58 SKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYP 175 SKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+P Sbjct: 118 SKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHP 169 >gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain isoform 2 [Homo sapiens] gi|16740931|gb|AAH16324.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|119620695|gb|EAX00290.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_b [Homo sapiens] Length = 201 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 96/172 (55%), Positives = 120/172 (69%), Gaps = 7/172 (4%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDL Sbjct: 58 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDL 117 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG--KQRVPRVLHKDYP 175 SKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+P Sbjct: 118 SKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHP 169 >gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 light intermediate chain [Apis mellifera] Length = 345 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 114/326 (34%), Positives = 187/326 (57%), Gaps = 29/326 (8%) Query: 25 DEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHN 84 +EE+ + + + +R++ +GSK GKTTI+ RFLE+DE KPT+A++Y+FGR+A G + Sbjct: 20 EEEQRRKTNPNETHERSIIIVGSKRVGKTTIVHRFLEKDEAPKPTIAMDYSFGRKA-GKS 78 Query: 85 TPKDIAHLWELGGGISLSDLVQIPITADNVSF----LSVVLVLDLSKPNALWETMESLLG 140 K+I H+WE+G S LV +T +++ ++++++LDLS+P LW T E L Sbjct: 79 LIKNIVHVWEVGH--LTSSLVSAAMTGSSLTHSPHHVTILVILDLSQPEILWTTFEEALS 136 Query: 141 SARNQV-----EKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFD 195 RN + +K+ L+K QR+ K ++E I PFP+ L +G K+D Sbjct: 137 VVRNAMKMSYDDKIIQELKK--------QRIKE--RKKIVEKE-IDPFPMRLCFIGGKYD 185 Query: 196 IFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 F+D D +K++++ KTLR +AH GASL + S+K ++ + + + ++ FGT+ Sbjct: 186 QFKDLDLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIKDLLSYYGFGTQFSDIKC 245 Query: 256 TDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKEL 315 TD KPLAI AG+DS S I ++ D K+++ P ES L Sbjct: 246 TDFEKPLAISAGTDSFSSI------DLQFPQTRPSAMLDTIKQIYVTHIPQESRSNEIIL 299 Query: 316 KDPVKDPQFSEPLIDSIRAQKDQELD 341 +DP DP F+EP+ID +R Q+++E++ Sbjct: 300 EDPSNDPNFNEPIIDRLRTQREEEIN 325 >gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] Length = 358 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 118/317 (37%), Positives = 178/317 (56%), Gaps = 22/317 (6%) Query: 37 PSQRTVFFMGSKAGGKTTILLRFLERDETA-KPTLALEYTFGRRARGHNTPKDIAHLWEL 95 P +RT+ +GSK GKTT + +F +R+E A +PTLALEY+FGRR +P+ + ++WEL Sbjct: 45 PKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWEL 103 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETME----SLLGSARNQVEKVCA 151 G + L+++P+ + L+V+L+LDLS+P W +E L +A+ +EKV Sbjct: 104 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 163 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L++ E R+ V RV ++ D E + P P P++IVG K+D+F FD RK C+ Sbjct: 164 ELREILEQRT----VERVGQQN-KDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 218 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGT-ERP-KSISTDPSKPLAIPAGSD 269 LR +AH G +L+F S K R I L FG+ P +S D ++PL I G+D Sbjct: 219 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 278 Query: 270 SLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 S S+IG A V+ + A ++ + EK ++ KE DP KDP F E +I Sbjct: 279 SWSKIGDTGAQSVE--RIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVI 329 Query: 330 DSIRAQKDQELDQYKRE 346 D IR+QK++EL R+ Sbjct: 330 DEIRSQKNEELAGLMRD 346 >gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melanogaster] gi|22946025|gb|AAF52775.2| CG3769-PA [Drosophila melanogaster] gi|66770889|gb|AAY54756.1| IP11319p [Drosophila melanogaster] Length = 368 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 120/338 (35%), Positives = 185/338 (54%), Gaps = 22/338 (6%) Query: 16 EVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA-KPTLALEY 74 ++ R + + + E P +RT+ +GSK GKTT + +F +R+E A +PTLALEY Sbjct: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEY 93 Query: 75 TFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWET 134 +FGRR +P+ + ++WELG + L+++P+ + L+V+L+LDLS+P W Sbjct: 94 SFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTD 152 Query: 135 ME----SLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIV 190 +E L +A+ +EKV L++ E R+ V RV ++ D E + P P P++IV Sbjct: 153 LECAYKGLRDTAQQMMEKVTPELREILEQRT----VERVGQQN-KDSEKLDPLPFPVIIV 207 Query: 191 GSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGT-E 249 G K+D+F FD RK C+ LR +AH G +L+F S K R I L FG+ Sbjct: 208 GGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA 267 Query: 250 RP-KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHES 308 P +S D ++PL I G+DS S+IG A V+ + A ++ + EK Sbjct: 268 HPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQLQLEK------ 319 Query: 309 TRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 ++ KE DP KDP F E +ID IR+QK++EL R+ Sbjct: 320 -QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRD 356 >gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoobscura] gi|54645577|gb|EAL34315.1| GA17674-PA [Drosophila pseudoobscura] Length = 368 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 111/345 (32%), Positives = 180/345 (52%), Gaps = 22/345 (6%) Query: 11 DIAAAEVRSRESRTDEEEA---EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE-TA 66 D A ++ R EE+ + E P +RT+ +GSK GK+T + +F +R+E T Sbjct: 26 DNATPSIQDIAGRLAEEQQRLRQLEATSMPKERTLLVLGSKCVGKSTAINKFFDREEHTT 85 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 +PTLALEY+FGRR +P+ + ++WELG + L+++P+ + L+V +++DLS Sbjct: 86 RPTLALEYSFGRRIGSGRSPQ-VINVWELGSLDNADQLLEVPMRTHGLQQLAVFIMVDLS 144 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVP 186 +P W +E R +++ A + ++ + RV H++ D + P P Sbjct: 145 QPQRFWTDLECAYKGLRVTSQELLARMTPELRETLEQRTLERVGHQNKEDLGTLELLPFP 204 Query: 187 LLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 ++IVG K+D+F D +K IC+ LR +AH G +L+F S K R I+ + F Sbjct: 205 VVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGALLFYSQKVPKLSKVLRDTISHMGF 264 Query: 247 GT-ERP-KSISTDPSKPLAIPAGSDSLSQIGPPVATEVD-IGTLHAKNPFDLWKKVFEKV 303 G+ P +S TD ++PL++ G+DS S+IG A V+ IG F Sbjct: 265 GSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDTGAQSVERIGA------------TFGVA 312 Query: 304 FPHESTRERKEL--KDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 P ++ + +DP KDP F E LID +RAQK++EL R+ Sbjct: 313 VPQLQLEKQLQQVPQDPAKDPGFKESLIDEMRAQKNEELATIMRD 357 >gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermediate chain [Tetrahymena thermophila] Length = 474 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 101/315 (32%), Positives = 163/315 (51%), Gaps = 16/315 (5%) Query: 39 QRTVFFMGSKAGGKTT---ILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++T+ +G K GKTT IL + D+ PT+ L+Y + RR + K++ H +EL Sbjct: 43 EKTLVVIGDKGSGKTTFVNILKNMQQVDDRYIPTVGLDYQYVRRTNANR--KELIHSYEL 100 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 GGG S ++ IPI+ N +LVLDLSKP+ + E+ R Q+++ Sbjct: 101 GGGKEQSKMITIPISKQNFRDAFYILVLDLSKPHQIIESATFWFEEIRRQIDQFNLTAFT 160 Query: 156 TGE---SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTL 212 T E RS + + + +PD+ + P+ +++G K+D+F+ DSE RK + +TL Sbjct: 161 TPEENDQRSNFEFAQQARFESHPDKNRVKILPIQTIVIGMKYDLFEKTDSENRKWLTRTL 220 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R+LAH GASL F SSK+ RS +N FG + ++ +P+ I D L+ Sbjct: 221 RYLAHVNGASLYFASSKNNDLFQNVRSIMNNALFGKTLAQYYQSEHLRPIEISLSKDELA 280 Query: 273 QIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVK-DPQFSEPLIDS 331 ++G P + G + F KKV ++ FP + +DP++ +F E IDS Sbjct: 281 KMGLPQIS----GNMTYLEAF---KKVIQETFPENKGAQNDASQDPLRLMEKFPEARIDS 333 Query: 332 IRAQKDQELDQYKRE 346 IRA+KD+E+ +E Sbjct: 334 IRAEKDKEMKAISKE 348 >gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00000012631 [Nasonia vitripennis] Length = 357 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 102/334 (30%), Positives = 182/334 (54%), Gaps = 24/334 (7%) Query: 21 ESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRA 80 + +TD EE+ E +++ +GS+ GKTT++ RFLE+++T KPTLA++Y++GR+A Sbjct: 25 QRKTDPEESHE--------KSLIILGSREVGKTTMIYRFLEKEDTPKPTLAMDYSYGRKA 76 Query: 81 RGHNTPKDIAHLWELG--GGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESL 138 G + KD+ H+WE+G +S ++ + + +V+++LDL KP+ LW ++E Sbjct: 77 -GKSLVKDVVHVWEVGHLAPSLISGSMRGCTLSHSAHHTTVLIMLDLGKPDVLWNSLEEC 135 Query: 139 LGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRE--LISPFPVPLLIVGSKFDI 196 L + R + + + + R K R R K + E + PFP+ L ++G K+D Sbjct: 136 LVAVRAAM-MMSYQQELVHDLRERKIRYLRERAKPGTEDEPPVDDPFPMRLCLIGGKYDE 194 Query: 197 FQDFDS-EKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 F++ S + ++ I + LR AH GA L + S+K + +++ ++ F + K+ Sbjct: 195 FRELHSGDDKESIGQALRAAAHVLGAGLHYHSAKDSHLLRRTKELLSHYGFKGQSTKASV 254 Query: 256 TDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRER--- 312 TD KPL++ AGSDS S I ++ TL D K+++ + FP + Sbjct: 255 TDYDKPLSVAAGSDSFSAIDLKISRNDYAVTL------DEIKQIYVRRFPQVPKNQDVLP 308 Query: 313 KELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 ++ DP DP F+EP++D +R Q++QE+ R+ Sbjct: 309 GDMDDPANDPNFNEPIVDRLRLQREQEISVLLRD 342 >gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70877049|gb|EAN90434.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 422 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 115/383 (30%), Positives = 189/383 (49%), Gaps = 47/383 (12%) Query: 1 MPKVSSDTLWDIAAAEV-RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRF 59 MP+V+ D D+ + +RE++ + E V +G+ GGKT++L R Sbjct: 50 MPQVTVDPTKDLWQNIILNTRENQVTQTEV-----------NVLIVGTSGGGKTSLLRRI 98 Query: 60 LERDETA-----------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIP 108 T+ KPT AL+Y+F RR H +AH WEL G+ LS L ++ Sbjct: 99 FSGVNTSSSSVPKSFLRVKPTTALDYSFVRRNDRHIA--QVAHFWELAQGMELSQLCEVV 156 Query: 109 ITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRV 166 IT +NV + + +V+D S+P+ +W+T+ + +V ++ ++ G + K R Sbjct: 157 ITPENVHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRA 216 Query: 167 PRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFT 226 R++ ++PD + VP +I+ +K D F + K + +++RF+AH YGA L+FT Sbjct: 217 KRLVGMEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFT 275 Query: 227 SSKSETTMSKSRSFINQLAF-GTERPKSISTDPSKP--LAIPAGSDSLSQIGPPVATEVD 283 S+ K R+ +N L F T K I DP + L IP+ +D+ + IG P + D Sbjct: 276 ---SDAEAIKLRAVMNHLVFVSTFDLKHIELDPERGAVLVIPS-ADTFADIGEPAVS--D 329 Query: 284 IGTLHAKN--PFDLWKKVFEKVFPHESTRER-------KELKDPVKDPQFSEPLIDSIRA 334 +G L + D WK + +FP + + R K L D + F EP +D++R Sbjct: 330 MGGLQSTGDAELDRWKAPLDAMFPAKQSEGRMQNDSFLKRLYD-TGENGFGEPTVDAVRK 388 Query: 335 QKDQELDQYKREQAKSWKSLALD 357 QK+ EL+QY++ K KS D Sbjct: 389 QKEDELEQYRKSAFKREKSTKDD 411 >gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] gi|89300006|gb|EAR97994.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] Length = 487 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 100/328 (30%), Positives = 164/328 (50%), Gaps = 29/328 (8%) Query: 39 QRTVFFMGSKAGGKTT---ILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++T+ +G K GKTT IL + D+ PT+ L+Y + RR + K++ H +EL Sbjct: 43 EKTLVVIGDKGSGKTTFVNILKNMQQVDDRYIPTVGLDYQYVRRTNANR--KELIHSYEL 100 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 GGG S ++ IPI+ N +LVLDLSKP+ + E+ R Q+++ Sbjct: 101 GGGKEQSKMITIPISKQNFRDAFYILVLDLSKPHQIIESATFWFEEIRRQIDQFNLTAFT 160 Query: 156 TGE---SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTL 212 T E RS + + + +PD+ + P+ +++G K+D+F+ DSE RK + +TL Sbjct: 161 TPEENDQRSNFEFAQQARFESHPDKNRVKILPIQTIVIGMKYDLFEKTDSENRKWLTRTL 220 Query: 213 RFLAHFYGASLIFTSSKSETTM-------------SKSRSFINQLAFGTERPKSISTDPS 259 R+LAH GASL F SS ++ + RS +N FG + ++ Sbjct: 221 RYLAHVNGASLYFASSNTQIHVLFNQHNKRNNDLFQNVRSIMNNALFGKTLAQYYQSEHL 280 Query: 260 KPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPV 319 +P+ I D L+++G P + G + F KKV ++ FP + +DP+ Sbjct: 281 RPIEISLSKDELAKMGLPQIS----GNMTYLEAF---KKVIQETFPENKGAQNDASQDPL 333 Query: 320 K-DPQFSEPLIDSIRAQKDQELDQYKRE 346 + +F E IDSIRA+KD+E+ +E Sbjct: 334 RLMEKFPEARIDSIRAEKDKEMKAISKE 361 >gi|115690607|ref|XP_001202918.1| PREDICTED: similar to Dynein, cytoplasmic 2, light intermediate chain 1, partial [Strongylocentrotus purpuratus] gi|115733494|ref|XP_788980.2| PREDICTED: similar to Dynein, cytoplasmic 2, light intermediate chain 1, partial [Strongylocentrotus purpuratus] Length = 170 Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats. Identities = 70/142 (49%), Positives = 99/142 (69%), Gaps = 3/142 (2%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 ++WDIA E + + +E+ E S+ + F+GSK GKT+I+LRFLE++E K Sbjct: 4 SIWDIAILEAEQKHATESKEQGGEAKG---SENHILFIGSKNAGKTSIILRFLEKEEAPK 60 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 PT+ALEYTFGRRA+GHN KDI H+WELGGG LS L +IP++ D + S+++V+DLS+ Sbjct: 61 PTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDLSQ 120 Query: 128 PNALWETMESLLGSARNQVEKV 149 P LW TME+L+ A + VE+V Sbjct: 121 PYELWHTMETLIKGALDHVEQV 142 >gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 134 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 70/131 (53%), Positives = 93/131 (70%) Query: 227 SSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGT 286 +SKSE + K R INQLAFG ++ KS+ D +KPL I AG DSL QIG P + DIG Sbjct: 3 TSKSEALLLKMRGVINQLAFGIDKSKSMCVDQNKPLFITAGLDSLCQIGSPPVPDSDIGK 62 Query: 287 LHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 L A +P +LWKKV+EK+FP +ST K ++DP +DPQ++E +D +R QKDQEL+QYKR Sbjct: 63 LQAHSPMELWKKVYEKLFPPKSTSTLKAIQDPARDPQYAESEVDEMRVQKDQELEQYKRS 122 Query: 347 QAKSWKSLALD 357 +K+WK + LD Sbjct: 123 SSKTWKQIELD 133 >gi|57092883|ref|XP_531798.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 2 isoform 1 [Canis familiaris] Length = 107 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 70/109 (64%), Positives = 82/109 (75%), Gaps = 8/109 (7%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R S D E E ++VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGSEGDGLEIGE--------KSVFFIGSKNGGKTTIILRCLDRDEP 54 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNV 114 KPTLALEYT+GRRA+GHN PKDIAH WELGGG SL DL+ IPIT+DN+ Sbjct: 55 PKPTLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNL 103 >gi|26252194|gb|AAH40558.1| DYNC2LI1 protein [Homo sapiens] Length = 144 Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats. Identities = 68/109 (62%), Positives = 81/109 (74%), Gaps = 5/109 (4%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 3 SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDEP 57 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNV 114 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + Sbjct: 58 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTL 106 >gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Trypanosoma brucei TREU927] gi|70835124|gb|EAN80626.1| dynein light intermediate chain, putative [Trypanosoma brucei] Length = 418 Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats. Identities = 92/335 (27%), Positives = 159/335 (47%), Gaps = 27/335 (8%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL-----------ERDETAKPTLALEYTFGRRARGHNTP 86 S+ +F +G GKT+++ R + KPT AL+Y + R+ H + Sbjct: 82 SEANLFVVGCSGAGKTSVIQRVCSAIGAGGNTSGKGKTKVKPTTALDYQYTTRSDRHVS- 140 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 H WEL G+ LS L ++ IT +NV + + +V+D S P+++W+T+ L + Sbjct: 141 -QTVHFWELAQGMELSQLCEVVITPENVHLMHIAIVVDFSDPSSMWDTLAYWLKRVDRRA 199 Query: 147 EKVCAALQKTGESRSGK--QRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEK 204 ++ ++ G + K R R L + +PD + + +P +IV +K D F E+ Sbjct: 200 NEILQKMRAKGSNTPDKLHARAQRALGEGHPDLKRVRLSGLPTVIVCNKVDAFPG-PMEQ 258 Query: 205 RKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 K + + LRF+AH YGA L+F+S + + + L R + + L + Sbjct: 259 MKTLTRCLRFIAHLYGAYLVFSSDADSAKLRLLLNHLLFLTPFDARQVELDVERGTILIM 318 Query: 265 PAGSDSLSQIG-PPVATEVDIGTL---HAKNPFDLWKKVFEKVFPHESTRERKELKDPVK 320 P +D+ IG PP+ G + + D WK + +FP ++ R + +K Sbjct: 319 PE-NDTFVDIGDPPLCDGPSGGPVTQSTGDSELDRWKVPLDAMFPPKAGGGRAQSDAMLK 377 Query: 321 ------DPQFSEPLIDSIRAQKDQELDQYKREQAK 349 + F EP ID+IR QKD+EL+QY++ A+ Sbjct: 378 RLYDMGEGGFGEPTIDTIRRQKDEELEQYRKSAAR 412 >gi|146097038|ref|XP_001468017.1| dynein light intermediate chain [Leishmania infantum JPCM5] gi|134072383|emb|CAM71091.1| dynein light intermediate chain, putative [Leishmania infantum] Length = 424 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 94/335 (28%), Positives = 167/335 (49%), Gaps = 28/335 (8%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL---------ERDETAKPTLALEYTFGRRARGHNTPKD 88 ++ ++ +G+ GKTT+L R + K T AL+Y+F RR+ + P Sbjct: 89 TETSLVMVGASGSGKTTLLHRIYTSFQSSSSGSGPKRVKATTALDYSFARRSERNVAP-- 146 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPN--ALWETMESLLGSARNQV 146 +AH WE+ G S L+ I +T +NV ++ +V+D S+ WET L +V Sbjct: 147 VAHFWEIAQGTQFSQLLDIVLTPENVHAVAAAVVVDASEEGLPVSWETATYWLRRLDQRV 206 Query: 147 EKVCAALQKTGESRSGK--QRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEK 204 + ++ G + K R + + D+PD + + +P ++V +K D F+ D ++ Sbjct: 207 SDISQRMKAKGSTTPAKILTRAQKAIGLDHPDLKRMRLSGIPTVLVVNKIDAFRG-DMQQ 265 Query: 205 RKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTE-RPKSISTDPSK-PL 262 K++C+++R+LAH YGA ++FTS + + R+ +N F PK + TDP + + Sbjct: 266 LKLLCRSMRYLAHLYGAHVVFTSEQESV---RWRALMNFTLFQAPFDPKYLQTDPERSAV 322 Query: 263 AIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDP---- 318 + DS IG P + + D WK F++ FP + E K + DP Sbjct: 323 LLTVDRDSFLDIGDPDVSRLGGSVSTGDAELDRWKAPFDEAFPPKKLNEDKVMDDPFIRR 382 Query: 319 ---VKDPQFSEPLIDSIRAQKDQELDQYKREQAKS 350 + F +P+ID++R QKD+EL+QY+++ + + Sbjct: 383 LYDTAEGGFGDPVIDALRKQKDEELEQYRKKSSNA 417 >gi|157874331|ref|XP_001685649.1| dynein light intermediate chain, putative [Leishmania major] gi|68128721|emb|CAJ08854.1| dynein light intermediate chain, putative [Leishmania major] Length = 425 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 95/330 (28%), Positives = 162/330 (49%), Gaps = 29/330 (8%) Query: 38 SQRTVFFMGSKAGGKTTILLRFLERDET---------AKPTLALEYTFGRRARGHNTPKD 88 ++ ++ +G+ GKTT+L R ++ K T AL+Y+F RR+ + P Sbjct: 89 TETSLVVVGASGSGKTTLLHRIYTSFQSNSSGSGPKRVKATTALDYSFARRSERNVAP-- 146 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPN--ALWETMESLLGSARNQV 146 +AH WE+ G S L+ I +T +NV + +V+D S+ WET L +V Sbjct: 147 VAHFWEIAQGTQFSQLLDIVVTPENVHAVVAAVVVDASEEGLPVAWETATYWLRRLDQRV 206 Query: 147 EKVCAALQKTGESRSGK--QRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEK 204 + ++ G + K R + + D+PD + + VP ++V +K D F+ D ++ Sbjct: 207 SDISQRMKAKGSTTPAKILTRAQKAIGLDHPDLKRMRLSGVPTVLVINKIDAFRR-DMQQ 265 Query: 205 RKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTE-RPKSISTDPSKP-L 262 K +C+++R+LAH YGA ++FTS + + R+ +N F PK + TDP + + Sbjct: 266 LKFLCRSMRYLAHLYGAHVVFTSEQESV---RWRALMNFTLFQAPFDPKYLQTDPERSAV 322 Query: 263 AIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRER-KELKDP--- 318 + DS IG P + + D WK F++ FP + E K + DP Sbjct: 323 LLTVDRDSFLDIGDPDVSRLGGSASTGDAELDRWKAPFDEAFPPKKLNEEGKVVDDPFIR 382 Query: 319 ----VKDPQFSEPLIDSIRAQKDQELDQYK 344 + F +P+ID++R QKD+EL+QY+ Sbjct: 383 RLYDTSEGGFGDPVIDALRKQKDEELEQYR 412 >gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] gi|31376209|gb|AAO12154.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|33334344|gb|AAQ12259.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|47680185|gb|AAT37069.1| dynein 1b light intermediate chain [Chlamydomonas reinhardtii] gi|158276532|gb|EDP02304.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] Length = 427 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 95/345 (27%), Positives = 169/345 (48%), Gaps = 31/345 (8%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRR-ARGH 83 EE ++ A +F+GS+A GK+T+L RFL R E KP+ +EYT+ R+ A Sbjct: 28 EERKKPGADGRGDAFCYFVGSRAAGKSTLLNRFLYPTRAEVPKPSEGIEYTYARKPAAFD 87 Query: 84 NTPKDIAHLWELGGGISLSDLV----QIPITADNVSFLSVVLVLDLSKPNALWETMESLL 139 + KD+AH+WE+GG ++ + Q+ +TA V+ VV+V+DLS P + T+ + Sbjct: 88 HEKKDLAHIWEVGGSQEFAEEIVNSDQLFLTAKQVTTAVVVIVVDLSDPAGVLPTLLYWV 147 Query: 140 GSARNQVEKVCAALQKTGES--RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF 197 + ++ +K G +QR L+ D++ + + L+I +K+D F Sbjct: 148 EQVKKKLGSTYEKFEKKGLQLPEQLRQRAKSKLYSANEDKDTVYHSGISLVIAATKYDAF 207 Query: 198 QDFDSEKRKVICKTLRFLAHFYGASLIFTS----------SKSETTMSKSRSFINQLAF- 246 ++ D E +KV+ + LR++AH +GA L + S ++ + +N L F Sbjct: 208 KNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLHGASEGSGAEDAALLDNFTRLMNHLIFT 267 Query: 247 GTERPKSISTDP----SKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 G E+ + P + P+ +PAG D+ +G P + G W+++FEK Sbjct: 268 GLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSVGRPRSQ----GEGTVAGGLAEWRELFEK 323 Query: 303 VFPHESTRERKELKDPVK---DPQFSEPLIDSIRAQKDQELDQYK 344 +FP +E K K Q+ E +D++R +K +L+ ++ Sbjct: 324 MFPGVREKEAKMSAKGAKFVIPEQYKEEEVDAVRQRKVTDLENFR 368 >gi|154343515|ref|XP_001567703.1| dynein light intermediate chain, putative [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065035|emb|CAM43147.1| dynein light intermediate chain, putative [Leishmania braziliensis] Length = 428 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 95/332 (28%), Positives = 165/332 (49%), Gaps = 32/332 (9%) Query: 45 MGSKAGGKTTILLRFLERDETA---------KPTLALEYTFGRRARGHNTPKDIAHLWEL 95 +G+ GKTT+L R +++ K T AL+Y+F RR+ + P +AH WE+ Sbjct: 96 VGAPGSGKTTLLHRIYTSFQSSASGSCSKRVKATTALDYSFARRSERNVAP--VAHFWEI 153 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPN--ALWETMESLLGSARNQVEKVCAAL 153 G+ S L+ + +T +NV + +V+D S+ WE + +V + + Sbjct: 154 AQGMQFSQLLDVVVTPENVHAIVAAVVVDASEEGLPVAWEAATYWMRRIDQRVSDISQRM 213 Query: 154 QKTGESRSGK--QRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 + G + K R + + ++PD + + VP ++V +K D F+ D ++ K++C++ Sbjct: 214 KAKGSTTPEKLLTRAQKAVGLEHPDLKRMRLSGVPTVLVVNKIDAFRG-DMQQLKLLCRS 272 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTE-RPKSISTDPSK-PLAIPAGSD 269 +R+LAH YGA ++FTS + + R+ +N F PK + TDP + + + A D Sbjct: 273 MRYLAHLYGAHVVFTSEQESV---RWRALMNFTLFQAPFDPKHLQTDPERGAVLLTADRD 329 Query: 270 SLSQIGPPVATEVDIGTLHAKN---PFDLWKKVFEKVFPHES-TRERKELKDP------- 318 S IG P + + G A D WK F+ FP + E K + DP Sbjct: 330 SFLDIGDPNMSRLGGGGSSASTGDAELDRWKVPFDDAFPPKKLNEEDKVMDDPFIRRLYD 389 Query: 319 VKDPQFSEPLIDSIRAQKDQELDQYKREQAKS 350 + F EP+ID++R QKD+EL+QY++ + + Sbjct: 390 TSEGGFGEPMIDTLRKQKDEELEQYRKNSSNA 421 >gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70865007|gb|EAN81375.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 286 Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats. Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 28/241 (11%) Query: 1 MPKVSSDTLWDIAAAEV-RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRF 59 MP+V+ D D+ + +RE++ + E V +G+ GKT++L R Sbjct: 50 MPQVTVDPTKDLWQNIILNTRENQVTQTEV-----------NVLIVGTSGSGKTSLLRRI 98 Query: 60 LERDETA-----------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIP 108 T+ KPT AL+Y+F RR H +AH WEL G+ LS L ++ Sbjct: 99 FSGVNTSSSSVPKSFLRVKPTTALDYSFVRRNDRHIA--QVAHFWELAQGMELSQLCEVV 156 Query: 109 ITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRV 166 IT +NV + + +V+D S+P+ +W+T+ + +V ++ ++ G + K R Sbjct: 157 ITPENVHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRA 216 Query: 167 PRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFT 226 R++ ++PD + VP +I+ +K D F + K + +++RF+AH YGA L+FT Sbjct: 217 KRLVGMEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFT 275 Query: 227 S 227 S Sbjct: 276 S 276 >gi|123423641|ref|XP_001306418.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121887991|gb|EAX93488.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 286 Score = 99.4 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 77/320 (24%), Positives = 137/320 (42%), Gaps = 52/320 (16%) Query: 26 EEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNT 85 E E E + V F+G + GK++++ +F R ++ PTLAL Y N Sbjct: 16 EHETEPIKPYGAGDSHVLFVGGEQSGKSSLINQFFGRGDSTYPTLALAYQCCNLKV--NG 73 Query: 86 PKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 + + H WELGGG+ + L+ T D +S V + DLSK ++ E++E L Sbjct: 74 KEKVLHFWELGGGVQMESLIPTIATEDTISGFVVFVCFDLSKSASIIESLEWL------- 126 Query: 146 VEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKR 205 +L D++ + + G+ +D+F+ + + Sbjct: 127 ----------------------DILQMRLKDKQ------NAIFLAGTHYDLFESKSPQDK 158 Query: 206 KVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIP 265 ++I + LR +A + L+FTSSK ET +++ ++ I + + S D P+ + Sbjct: 159 EIIVQGLRSIAAEHKVGLVFTSSKMETLINRFKNVIKYVCIANSNVREKSVDFFNPVIVG 218 Query: 266 AGSDS-LSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQF 324 G+D+ L G VA D+ K+ ++ + + LK+ + DP Sbjct: 219 PGADTELQTSGQEVA--------------DMMNKLSAEIAIEKRDKSSNSLKNVITDPGL 264 Query: 325 SEPLIDSIRAQKDQELDQYK 344 +E IDS+ K EL+ K Sbjct: 265 AEEDIDSLYLAKKAELNSKK 284 >gi|158597036|gb|EDP35273.1| dynein 2 light intermediate chain, putative [Brugia malayi] Length = 140 Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 1/117 (0%) Query: 231 ETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAK 290 E +SK+R I+ + FGT K+I TD +KPL++P G+DSL IG P + + A Sbjct: 2 ENLISKTRVLISSVVFGTTASKTICTDHNKPLSVPCGADSLMDIGAPPFINSSLSLIGAT 61 Query: 291 NPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 NP DLW + + + FP++ +E +P +D Q EP ID + Q+ +EL+QY R + Sbjct: 62 NPRDLWYEAYLEHFPNKEKHNERE-DNPAEDGQHKEPEIDELIEQRTRELEQYIRHK 117 >gi|158599820|gb|EDP37275.1| hypothetical protein Bm1_12090 [Brugia malayi] Length = 116 Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats. Identities = 37/77 (48%), Positives = 56/77 (72%), Gaps = 2/77 (2%) Query: 38 SQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 S + GS+ GKT+++ RFL R+E KPT+ALEYT+GRR RG KD+ ++WELGG Sbjct: 41 SDTRLIICGSRNCGKTSMIFRFLNRNEDTKPTIALEYTYGRRNRGKM--KDVGNIWELGG 98 Query: 98 GISLSDLVQIPITADNV 114 G +L +L+QIP++++ + Sbjct: 99 GTNLCNLLQIPLSSNYI 115 >gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT00009430001 [Paramecium tetraurelia strain d4-2] gi|124407696|emb|CAK73082.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 25/210 (11%) Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLS-KPNALWETMESLLGSARNQVEKVCAALQKT 156 G + L+ +P+ + S VLV+DLS P+ + + + R + EK LQ++ Sbjct: 75 GQAFKQLLTLPLNKQSYQQYSYVLVIDLSDNPHEILNVCNAEIRYIREETEK---KLQQS 131 Query: 157 GESRSGKQRVPRVLHK--DYPDRELISPFPVPLLIVGSKFDIF-QDFDSEKRKVICKTLR 213 + + KQ + K + D+ I P VP++IVG K+D+F ++ D E RK I + LR Sbjct: 132 IDVDTFKQLELNIYDKIMMHHDKNRIVPLYVPIIIVGWKYDLFSKNLDLESRKWITRGLR 191 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQ-LAFGTERPKSI-STDPSKPLAIPAGSDSL 271 +LAH SL+F S ++ F+ Q L + + SI D K + I SDS+ Sbjct: 192 YLAHTNNCSLVFGS-------NQDYQFVRQTLQYHVKPTASIYQYDHLKQICITQLSDSI 244 Query: 272 SQIGPPVATEVDIGTLHAKNPFDLWKKVFE 301 I P + NP D + K+ + Sbjct: 245 ENINLPPS---------GNNPLDGFNKIIK 265 >gi|123415018|ref|XP_001304608.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121886072|gb|EAX91678.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 287 Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 126/323 (39%), Gaps = 62/323 (19%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E+A + ++ F+GS+ GK+ + +F R + TLAL Y + A Sbjct: 16 EKASSLKSGVNEEKHFLFVGSEKSGKSCLQNQFFSRRDEPPETLALSY---QSASVRQDD 72 Query: 87 KDIA-HLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 K++ H WE+G G L L+ +T + + + + +++KP+++ ++ A N Sbjct: 73 KEVVLHFWEIGSGTKLDQLINTIVTKETLKDFNAFICFNVNKPSSILTAID----WAENL 128 Query: 146 VEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKR 205 + K Q + +G+ +D F+ D ++ Sbjct: 129 ISKFAYKSQS-------------------------------IYFIGTFYDTFESNDPSQK 157 Query: 206 KVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIP 265 + LR +A Y A LIFTS K + ++ + I QLA G I T P+ I Sbjct: 158 INTVQGLRAIASKYHAGLIFTSYKDDNLANRFKGLIRQLALGETPTGEIITQHISPVFIL 217 Query: 266 AGSDSL---SQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDP 322 SD ++I P ++ K P + + DP Sbjct: 218 PDSDKECGGNEIISPYVRQL-------------------KSAPPDDDAQAASKDDPTSS- 257 Query: 323 QFSEPLIDSIRAQKDQELDQYKR 345 +F+E ID + K++EL++ R Sbjct: 258 KFAEKEIDELAETKERELEEKLR 280 >gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT00019900001 [Paramecium tetraurelia strain d4-2] gi|124421326|emb|CAK86207.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 28/268 (10%) Query: 39 QRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 Q + F G GK+TI+ + ++ + L YT ++ + + +E+ G Sbjct: 21 QHSFVFCGQTQSGKSTIVSKLTS--QSIQEQAGLIYT--QQKTNIIGYQAVLQYFEVSGQ 76 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLS-KPNALWETMESLLGSARNQVEKVCAALQKTG 157 + L+ +P+ + S +LV+DLS P+ + + + + + EK LQ++ Sbjct: 77 -AFKQLLTLPLNKQSYQQYSYILVIDLSDNPHEILNVCNTEIRYIKEETEK---KLQQSI 132 Query: 158 ESRSGKQRVPRVLHK--DYPDRELISPFPVPLLIVGSKFDIF-QDFDSEKRKVICKTLRF 214 + + KQ + K + D+ I P VP++IVG K+D+F ++ D E RK I + LR+ Sbjct: 133 DVDTFKQLELNIYDKIMMHHDKNRIIPSYVPIIIVGWKYDLFSKNLDQESRKWITRGLRY 192 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI-STDPSKPLAIPAGSDSLSQ 273 LAH SL+F S++ + ++ L + + I D K L I SDS+ Sbjct: 193 LAHSNNCSLVFGSNQDYQLVKQT------LQYNVKPSAPIYQFDHLKQLCITQLSDSIEN 246 Query: 274 IGPPVATEVDIGTLHAKNPFDLWKKVFE 301 I P + NP D + K+ + Sbjct: 247 INLPPS---------GNNPLDGFNKIIK 265 >gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 374 Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 62/286 (21%), Positives = 117/286 (40%), Gaps = 44/286 (15%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E + + PS +T+ +G GKTT++ + L+ E + LEY + H+ Sbjct: 69 EVSTRSRSKLPSGKTILVLGDNGSGKTTLMAK-LQGAEHGQKGRGLEYLY---LNVHDED 124 Query: 87 KD---IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSAR 143 +D ++W L G I L++ ++A+++ V+ V+D+S+P E++E G R Sbjct: 125 RDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWTAMESLEKWAGVLR 184 Query: 144 NQVEKVCAALQKTGESRSGKQRV---------PRVLHKDYPDRE---------------- 178 ++K+ + E+R +Q++ P ++ R Sbjct: 185 EHIDKLKIPPE---ETRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQENASVSLSLG 241 Query: 179 ---LISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSK 229 L +P+L+V +K D + + E I +R YGA+LI+TS K Sbjct: 242 ENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQYGAALIYTSVK 301 Query: 230 SETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 E + ++ +G + + IPAG D+ +I Sbjct: 302 GEKNLDLLYKYLVHKMYGFQLTTPALVVEKDAVFIPAGWDNEKKIA 347 >gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin light chain A [Monodelphis domestica] Length = 520 Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 75/331 (22%), Positives = 126/331 (38%), Gaps = 46/331 (13%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V +G GKT+++ R R E K Sbjct: 43 LWSCILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGRIQGRPEECKK 91 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 EY + + ++W L G + L++ + A+++ V+LV+D+SKP Sbjct: 92 GRGAEYLYLSVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMEANSLRDTLVILVVDMSKP 151 Query: 129 NALWETMESLLGSARNQVEKVCAALQKT-----------------GESRSGKQRVPRVLH 171 ++++ R ++K+ ++ GE + L Sbjct: 152 WTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRRSTLQ 211 Query: 172 KDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 +D D L VP+L+V +K D D+ E I +R Sbjct: 212 EDKDDSVMLPLGADTLTYNLGVPVLVVCTKCDAISVLEKEHDYKDEHFDFIQSHIRKFCL 271 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 272 QYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFKIPAVVVEKDAVFIPAGWDNDKKIG-- 329 Query: 278 VATEVDIGTLHAKNPF-DLWKKVFEKVFPHE 307 + TL A++ F D+ K + F HE Sbjct: 330 -ILHENFQTLKAEDSFEDIITKPPVRKFVHE 359 >gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein, partial [Gallus gallus] Length = 388 Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 38/283 (13%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E + + PS +T+ +G GKTT++ + L+ E + LEY + H+ Sbjct: 6 EVSTRSRSKLPSGKTILVLGDNGSGKTTLMAK-LQGAEHGQKGRGLEYLY---LNVHDED 61 Query: 87 KD---IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSAR 143 +D ++W L G I L++ ++A+++ V+ V+D+S+P + E++E G R Sbjct: 62 RDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWTVMESLEKWAGVLR 121 Query: 144 NQV--------------EKVCAALQKTGESR-----SGKQRVPRVLHKDYP------DRE 178 + +K+ Q+ E S ++R P ++ + Sbjct: 122 EHIDKLKIPPEEMRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQENASVSLSLGENV 181 Query: 179 LISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSET 232 L +P+L+V +K D + + E I +R YGA+LI+TS K E Sbjct: 182 LTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQYGAALIYTSVKGEK 241 Query: 233 TMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 + ++ +G + + IPAG D+ +I Sbjct: 242 NLDLLYKYLVHKMYGFQLTTPALVVEKDAVFIPAGWDNEKKIA 284 >gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] gi|62531080|gb|AAH93336.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 122/317 (38%), Gaps = 46/317 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R S + PS + V G GKTT++ + L+ E K Sbjct: 31 LWSSILSEVSTRSS-----------SKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNKK 78 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + +W L G + L++ +TA+++ V V+D+S+P Sbjct: 79 GRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMSRP 138 Query: 129 NALWETMESLLGSARNQVEKV--------------CAALQKTGESR-----SGKQRVPRV 169 + E+++ R V+K+ A Q+ E S ++R P Sbjct: 139 WTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRRAPAA 198 Query: 170 LHKD------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 +D D L +P+LIV +K D D+ E I +R Sbjct: 199 AGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIRRFCL 258 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA LI+TS K E + ++ + + + IP+G D+ +IG Sbjct: 259 QYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVLIPSGWDNDKKIG-- 316 Query: 278 VATEVDIGTLHAKNPFD 294 + T+ ++PF+ Sbjct: 317 -ILHENFTTVRPEDPFE 332 >gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 72/317 (22%), Positives = 122/317 (38%), Gaps = 46/317 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R S + PS + V G GKTT++ + L+ E K Sbjct: 31 LWSSILSEVSTRSS-----------SKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNKK 78 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + +W L G + L++ +TA+++ V V+D+S+P Sbjct: 79 GRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMSRP 138 Query: 129 NALWETMESLLGSARNQVEKV--------------CAALQKTGESR-----SGKQRVPRV 169 + E+++ R V+K+ A Q+ E S ++R P Sbjct: 139 WTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRRAPAA 198 Query: 170 LHKD------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 +D D L +P+LIV +K D D+ E I +R Sbjct: 199 AGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIRRFCL 258 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA LI+TS K E + ++ + + + IP+G D+ +IG Sbjct: 259 QYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVFIPSGWDNDKKIG-- 316 Query: 278 VATEVDIGTLHAKNPFD 294 + T+ ++PF+ Sbjct: 317 -ILHENFTTVRPEDPFE 332 >gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein light intermediate chain 2 [Monodelphis domestica] Length = 493 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 72/302 (23%), Positives = 112/302 (37%), Gaps = 50/302 (16%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + + G GKTT+L + L+ E +K Sbjct: 35 LWSSILSEVSTRSR-----------SKLPSGKNILVFGEDGSGKTTLLAK-LQGAEHSKK 82 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + ++W L G + L++ ++A+ + V+ V D+S+P Sbjct: 83 GRGLEYLYLNIHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAETLQETLVIFVADMSRP 142 Query: 129 NALWETMESLLGSA-----------------RNQVEKVCAALQKTGESRSGKQ-----RV 166 W MESL A R+ +K Q+ E G Q R Sbjct: 143 ---WTVMESLQKWASVLREHIDKMKIPPEEMRDMEQKFVKDFQEYVEPEEGYQGSPQRRG 199 Query: 167 PRVLHKD-------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLR 213 P +D D L +P+L+V +K D D+ E I +R Sbjct: 200 PLASAQDGENVILPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHVR 259 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 YGA+LI+TS K E + +I +G + IPAG D+ + Sbjct: 260 KFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDNEKK 319 Query: 274 IG 275 I Sbjct: 320 IA 321 >gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light intermediate chain 2 isoform 3 [Bos taurus] Length = 492 Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 113/300 (37%), Gaps = 44/300 (14%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP--RVLH 171 P + E+++ R ++K+ Q E G Q P R Sbjct: 142 PWTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYVEPEEGCQGSPQRRGPL 201 Query: 172 KDYPDRE----------LISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 PD E L +P+L+V +K D D+ E I LR Sbjct: 202 TSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRRF 261 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K E + +I +G + + IPAG D+ +I Sbjct: 262 CLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKEAVFIPAGWDNEKKIA 321 >gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|55726458|emb|CAH89998.1| hypothetical protein [Pongo pygmaeus] Length = 492 Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 113/300 (37%), Gaps = 44/300 (14%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAG-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKTGE-------------------SRSGKQRVPR 168 P + E+++ R ++K+ +K E S ++R P Sbjct: 142 PWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPL 201 Query: 169 VLHKDYP-------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 D D L +P+L+V +K D D+ E I LR Sbjct: 202 TSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRF 261 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 262 CLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDNEKKIA 321 >gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon nigroviridis] Length = 400 Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 60/276 (21%), Positives = 106/276 (38%), Gaps = 28/276 (10%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E + + PS + V MG GKTT++ + DE K LEY + Sbjct: 6 EVSTHSRSKLPSGKNVLVMGEVGSGKTTLVAKLQGVDEYMKGR-GLEYLYFSVHDDDIDD 64 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 + W L G + L + + D++ +++ +D+S+P ++++ AR + Sbjct: 65 HARCNAWVLDGDLYHKGLQGVAVPVDSIGNTLLLITVDMSRPWNALDSLQKWAAVAREHI 124 Query: 147 EKVCAA--------------LQKTGESRSGKQRVPRVLHKDYP-------DRELISPFPV 185 +K+ A Q+ E SG+ P+ +D D L + Sbjct: 125 DKLRVAPETLRELEHNLVKQFQEYVEPGSGEDGTPQRRSEDEESILLPLGDSTLTHNLGI 184 Query: 186 PLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 P+++V +K D D+ E I LR YGASL++TS K + Sbjct: 185 PVVVVCTKCDAIGTLEKEHDYRDEHLDFIQSHLRRFCLQYGASLVYTSVKEMKNLDILYK 244 Query: 240 FINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 ++ +G P + IP+G D+ +I Sbjct: 245 YLVHRLYGFPFPCPAQVVERDAVFIPSGWDNEKKIA 280 >gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|67970473|dbj|BAE01579.1| unnamed protein product [Macaca fascicularis] Length = 492 Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 114/300 (38%), Gaps = 44/300 (14%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS +++ G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKSILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKTGE-------------------SRSGKQRVPR 168 P + E+++ R ++K+ +K E S ++R P Sbjct: 142 PWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPL 201 Query: 169 VLHKDYP-------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 D D L +P+L+V +K D D+ E I LR Sbjct: 202 TSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRF 261 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 262 CLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDNEKKIA 321 >gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] Length = 335 Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 73/321 (22%), Positives = 129/321 (40%), Gaps = 53/321 (16%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R SR+ P+ + V +G GKT+ L+R ++ E K Sbjct: 22 LWSCILSEVSTR-SRSK----------LPAGKNVLLLGEDGAGKTS-LIRKIQGIEEYKK 69 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 70 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 129 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLH------KDYP------- 175 ++++ R V+K+ + E + +Q++ R +D+P Sbjct: 130 WTALDSLQKWASVVREHVDKLKIPPE---EMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 186 Query: 176 -------DRELISP---------FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLR 213 D ++ P +P+L+V +K D D+ E I +R Sbjct: 187 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 246 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 YGA+LI+TS K + +I Q +G + IPAG D+ + Sbjct: 247 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKK 306 Query: 274 IGPPVATEVDIGTLHAKNPFD 294 IG + TL A++ F+ Sbjct: 307 IG---ILHENFQTLKAEDNFE 324 >gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Homo sapiens] Length = 492 Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 113/300 (37%), Gaps = 44/300 (14%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKTGE-------------------SRSGKQRVPR 168 P + E+++ R ++K+ +K E S ++R P Sbjct: 142 PWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPL 201 Query: 169 VLHKDYP-------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 D D L +P+L+V +K D D+ E I LR Sbjct: 202 TSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRF 261 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 262 CLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDNEKKIA 321 >gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Homo sapiens] gi|3287825|sp|O43237|DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|2665836|gb|AAB88513.1| dynein light intermediate chain 2 [Homo sapiens] gi|119603445|gb|EAW83039.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|119603446|gb|EAW83040.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|158256964|dbj|BAF84455.1| unnamed protein product [Homo sapiens] Length = 492 Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 113/300 (37%), Gaps = 44/300 (14%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKTGE-------------------SRSGKQRVPR 168 P + E+++ R ++K+ +K E S ++R P Sbjct: 142 PWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPL 201 Query: 169 VLHKDYP-------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 D D L +P+L+V +K D D+ E I LR Sbjct: 202 TSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRF 261 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 262 CLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDNEKKIA 321 >gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Gallus gallus] gi|53126839|emb|CAG30989.1| hypothetical protein [Gallus gallus] Length = 488 Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 113/301 (37%), Gaps = 49/301 (16%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + + G GKTT++ + ++ E K Sbjct: 31 LWSSILSEVSTRSR-----------SKLPSGKNILVFGDDGSGKTTLMAK-IQGAEHGKK 78 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ ++A+++ VV V D+S+P Sbjct: 79 GRGLEYLYLNIHDEDRDDQTRCNVWILDGDLYNKGLLKFAVSAESLQDTIVVFVADMSRP 138 Query: 129 NALWETMESLLGSA-----------------RNQVEKVCAALQKTGESRSGKQRVP--RV 169 W MESL A R+ +K Q+ E G Q P R Sbjct: 139 ---WTVMESLQKWASVLQEHIDKLKIPPEEMRDMEQKFIKEFQEYVEPEEGYQGSPQRRG 195 Query: 170 LHKDYPDRELISP---------FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D + P +P+L+V +K D D+ E I +R Sbjct: 196 PSSGQEDESVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHIRR 255 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI+TS K E + +I +G + + IPAG D+ +I Sbjct: 256 FCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFQFTTPALVVEKDAVFIPAGWDNEKKI 315 Query: 275 G 275 Sbjct: 316 A 316 >gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [Danio rerio] Length = 500 Score = 55.1 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 71/317 (22%), Positives = 121/317 (38%), Gaps = 46/317 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R S + PS + V G GKTT++ + L+ E K Sbjct: 31 LWSSILSEVSTRSS-----------SKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNKK 78 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + +W L G + L++ +TA+++ V V+D+S+P Sbjct: 79 GRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMSRP 138 Query: 129 NALWETMESLLGSARNQVEKV--------------CAALQKTGESR-----SGKQRVPRV 169 + E+++ R V+K+ A Q+ E S ++R P Sbjct: 139 WTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRRAPAA 198 Query: 170 LHKD------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 +D D L +P+LIV +K D D+ E I +R Sbjct: 199 AGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIRRFCL 258 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA LI+TS K E + ++ + + + IP+G D+ +I Sbjct: 259 QYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVFIPSGWDNDKKI--- 315 Query: 278 VATEVDIGTLHAKNPFD 294 + T+ ++PF+ Sbjct: 316 CILHENFTTVRPEDPFE 332 >gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Xenopus laevis] gi|112419317|gb|AAI22489.1| MGC154222 protein [Xenopus laevis] Length = 487 Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 68/282 (24%), Positives = 113/282 (40%), Gaps = 49/282 (17%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKD---IA 90 + PS + + G GKTT++ + L+ E K LEY + H+ +D Sbjct: 42 SKLPSGKNILVFGEDGSGKTTLMAK-LQGAEHNKKGRGLEYLY---LNIHDEDRDDLTRC 97 Query: 91 HLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSA---RNQVE 147 ++W L G + L++ + A+++S V V D+S+P W MESLL A R ++ Sbjct: 98 NVWILDGDLYHKGLLKFALPAESISETVAVFVGDMSRP---WTIMESLLKWASVLREHID 154 Query: 148 KV----------------------------CAALQKTGESRSGKQRVPRVLHKDYPDREL 179 K+ + Q+ G + SG + VL D L Sbjct: 155 KLKIPPEEMRELEQKIIKDFQEYVEPEEALSGSPQRRGPTSSGTEDENIVL--PLGDNIL 212 Query: 180 ISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 +P+L+V +K D D+ E I +R YG++LI+TS K E Sbjct: 213 THNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDFIQSHIRKFCLQYGSALIYTSVKEEKN 272 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 + +I + ++ + IPAG D+ +IG Sbjct: 273 LDLLYKYIVHKTYNFHFNRAAMVVEKDSVFIPAGWDNEKKIG 314 >gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light intermediate chain 2, cytosolic (LIC53/55) (LIC-2) [Canis familiaris] Length = 481 Score = 54.7 bits (130), Expect = 9e-06, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 106/281 (37%), Gaps = 33/281 (11%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E + + PS + + G GKTT++ + L+ E K LEY + Sbjct: 31 EVSTRARSKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGKKGRGLEYLYLSVHDEDRDD 89 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 ++W L G + L++ ++A+++ V+ V D+S+P + E+++ R + Sbjct: 90 HTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHI 149 Query: 147 EKV--------------CAALQKTGESRSGKQRVP--RVLHKDYPDRE----------LI 180 +K+ Q E G Q P R PD E L Sbjct: 150 DKMKIPPEEMRELERKFVKDFQDYIEPEEGCQGSPQRRGPLTSGPDEENVALPLGDNMLT 209 Query: 181 SPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTM 234 +P+L+V +K D D+ E I LR YGA+LI+TS K E + Sbjct: 210 HNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRRFCLQYGAALIYTSVKEEKNL 269 Query: 235 SKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 +I +G + IPAG D+ +I Sbjct: 270 DLLYKYIVHKTYGFHFVTPALVVEKDAVFIPAGWDNEKKIA 310 >gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_a [Mus musculus] Length = 527 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 111/300 (37%), Gaps = 44/300 (14%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 69 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 116 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 117 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMSR 176 Query: 128 PNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVPR----- 168 P + E+++ R ++K+ Q E G Q P+ Sbjct: 177 PWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSPQRRGPL 236 Query: 169 -------VLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 + D L +P+L+V +K D D+ E I LR Sbjct: 237 TSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQAHLRRF 296 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 297 CLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWDNEKKIA 356 >gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 133/335 (39%), Gaps = 54/335 (16%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+ L+R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTS-LIRKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLH------KDYP------- 175 ++++ R V+K+ + E + +Q++ R +D+P Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPE---EMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 176 -------DRELISP---------FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLR 213 D ++ P +P+L+V +K D D+ E I +R Sbjct: 213 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 YGA+LI+TS K + +I Q +G + IPAG D+ + Sbjct: 273 KFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKK 332 Query: 274 IGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHE 307 IG + TL A++ F D+ K + F HE Sbjct: 333 IG---ILHENFQTLKAEDNFEDIITKPPVRKFVHE 364 >gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A isoform 2 [Pan troglodytes] gi|134047749|sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|119584837|gb|EAW64433.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_c [Homo sapiens] gi|124297735|gb|AAI31621.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] Length = 523 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 133/335 (39%), Gaps = 54/335 (16%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+ L+R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTS-LIRKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLH------KDYP------- 175 ++++ R V+K+ + E + +Q++ R +D+P Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPE---EMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 176 -------DRELISP---------FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLR 213 D ++ P +P+L+V +K D D+ E I +R Sbjct: 213 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 YGA+LI+TS K + +I Q +G + IPAG D+ + Sbjct: 273 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKK 332 Query: 274 IGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHE 307 IG + TL A++ F D+ K + F HE Sbjct: 333 IG---ILHENFQTLKAEDNFEDIITKPPVRKFVHE 364 >gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculus] gi|74183685|dbj|BAE24463.1| unnamed protein product [Mus musculus] gi|74190862|dbj|BAE28215.1| unnamed protein product [Mus musculus] gi|74212500|dbj|BAE30992.1| unnamed protein product [Mus musculus] Length = 492 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 111/300 (37%), Gaps = 44/300 (14%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVPR----- 168 P + E+++ R ++K+ Q E G Q P+ Sbjct: 142 PWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSPQRRGPL 201 Query: 169 -------VLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 + D L +P+L+V +K D D+ E I LR Sbjct: 202 TSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQAHLRRF 261 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 262 CLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWDNEKKIA 321 >gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] gi|73919263|sp|Q6PDL0|DC1L2_MOUSE Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|35193080|gb|AAH58645.1| Dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] Length = 492 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 111/300 (37%), Gaps = 44/300 (14%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVPR----- 168 P + E+++ R ++K+ Q E G Q P+ Sbjct: 142 PWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSPQRRGPL 201 Query: 169 -------VLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 + D L +P+L+V +K D D+ E I LR Sbjct: 202 TSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQAHLRRF 261 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 262 CLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWDNEKKIA 321 >gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Rattus norvegicus] gi|2494218|sp|Q62698|DC1L2_RAT Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|619665|gb|AAA80334.1| LIC-2 gi|149032345|gb|EDL87236.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_b [Rattus norvegicus] Length = 497 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 113/300 (37%), Gaps = 44/300 (14%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKT-------------------GESRSGKQRVPR 168 P + E+++ R ++K+ ++ G S ++R P Sbjct: 142 PWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSPQRRGPL 201 Query: 169 VLHKD-------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 D D L +P+L+V +K D D+ E I LR Sbjct: 202 TSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQAHLRGF 261 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 262 CLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWDNEKKIA 321 >gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light chain-A [Canis familiaris] Length = 524 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 75/335 (22%), Positives = 133/335 (39%), Gaps = 54/335 (16%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+ L+R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTS-LIRKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAISLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLH------KDYP------- 175 ++++ R ++K+ + E + +Q++ R +D+P Sbjct: 156 WTALDSLQKWASVVREHIDKLKIPPE---EMKEMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 176 -------DRELISP---------FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLR 213 D ++ P +P+L+V +K D D+ E I +R Sbjct: 213 TGSQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 YGA+LI+TS K + +I Q +G + IPAG D+ + Sbjct: 273 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKK 332 Query: 274 IGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHE 307 IG + TL A++ F D+ K + F HE Sbjct: 333 IG---ILHENFQTLKAEDNFEDIITKPPVRKFVHE 364 >gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] Length = 492 Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 113/300 (37%), Gaps = 44/300 (14%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKT-------------------GESRSGKQRVPR 168 P + E+++ R ++K+ ++ G S ++R P Sbjct: 142 PWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSPQRRGPL 201 Query: 169 VLHKD-------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 D D L +P+L+V +K D D+ E I LR Sbjct: 202 TSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQAHLRGF 261 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 262 CLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWDNEKKIA 321 >gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] gi|73919261|sp|Q9QXU8|DC1L1_RAT Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|6651427|gb|AAF22294.1|AF181992_1 dynein light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 110/286 (38%), Gaps = 33/286 (11%) Query: 22 SRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRAR 81 SR E + + P+ + V +G GKT+ L+R ++ E K LEY + Sbjct: 50 SRILREVSTRSRSKLPTGKNVLLLGEDGAGKTS-LIRRIQGIEEYKKGRGLEYLYLNVHD 108 Query: 82 GHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGS 141 + ++W L G + L++ + A ++ V+LV+D+SKP ++++ Sbjct: 109 EDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVDMSKPWTALDSLQKWASV 168 Query: 142 ARNQVEKVCAALQKTGESR------------------SGKQRVPRVLHKDYPDR------ 177 R V+K+ ++ E + QR +D D Sbjct: 169 VREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRRATAAQEDRDDSVVLPLG 228 Query: 178 --ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSK 229 L +P+L+V +K D D+ E I +R YGA+LI+TS K Sbjct: 229 ADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVK 288 Query: 230 SETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 + +I Q +G + IPAG D+ +IG Sbjct: 289 ENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG 334 >gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 67/302 (22%), Positives = 119/302 (39%), Gaps = 50/302 (16%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+ L+R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTS-LIRKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLH------KDYP------- 175 ++++ R V+K+ + E + +Q++ R +D+P Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPE---EMKQIEQKLIRDFQEYVEPGEDFPASPQGRN 212 Query: 176 -------DRELISP---------FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLR 213 D ++ P +P+L+V +K D D+ E I +R Sbjct: 213 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 YGA+LI+TS K + +I Q +G + IPAG D+ + Sbjct: 273 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKK 332 Query: 274 IG 275 IG Sbjct: 333 IG 334 >gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] gi|5531813|gb|AAD44481.1| dynein light chain-A [Homo sapiens] Length = 523 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 75/335 (22%), Positives = 132/335 (39%), Gaps = 54/335 (16%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+ L+R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTS-LIRKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLH------KDYP------- 175 ++++ R V+K+ + E + +Q++ R +D+P Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPE---EMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 176 -------DRELISP---------FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLR 213 D ++ P +P+L+V +K D D+ E +R Sbjct: 213 TASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIR 272 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 YGA+LI+TS K + +I Q +G + IPAG D+ + Sbjct: 273 KFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKK 332 Query: 274 IGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHE 307 IG + TL A++ F D+ K + F HE Sbjct: 333 IG---ILHENFQTLKAEDNFEDIITKPPVRKFVHE 364 >gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] Length = 480 Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 68/282 (24%), Positives = 111/282 (39%), Gaps = 49/282 (17%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKD---IA 90 + PS + + G GKTT++ + L+ E K LEY + H+ +D Sbjct: 37 SKLPSGKNILVFGEDGSGKTTLVAK-LQGAEHNKKGRGLEYLY---LNIHDEDRDDLTRC 92 Query: 91 HLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSA---RNQVE 147 ++W L G + L++ + A+++ V V D+S+P W MESLL A R ++ Sbjct: 93 NVWILDGDLYHKGLLKFALPAESIGETVAVFVGDMSRP---WTIMESLLKWASVLREHID 149 Query: 148 KV----------------------------CAALQKTGESRSGKQRVPRVLHKDYPDREL 179 K+ + Q+ G + SG + VL D L Sbjct: 150 KLKIPPEEIRELEQKIIKDFQEYVEPEDALSGSPQRRGPTSSGTEDENIVL--PLGDNIL 207 Query: 180 ISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 +P+L+V +K D D+ E I +R YGA+LI+TS K E Sbjct: 208 THNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDFIQSHIRRFCLQYGAALIYTSVKEEKN 267 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 + +I + + + IPAG D+ +IG Sbjct: 268 LDLLYKYIVHKTYNFHFNCAAMVVEKDSVFIPAGWDNEKKIG 309 >gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella vectensis] gi|156225136|gb|EDO45956.1| predicted protein [Nematostella vectensis] Length = 422 Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 56/269 (20%), Positives = 110/269 (40%), Gaps = 30/269 (11%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 PS +++ +G+ GKTT++ + +++ LEYT+ ++W L Sbjct: 15 LPSHKSIILIGNDESGKTTLISKLRGKEDDISKGHGLEYTYLEVHDEEIDDYTRLNVWIL 74 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV--------- 146 G L++ +T + + VV+V+D S+P A+ E++ S R + Sbjct: 75 DGDPRNKSLLKYALTPKHARDVLVVMVVDCSRPWAIMESLHSWTEILREHIHSLKLSPKE 134 Query: 147 -----EKVCAALQKTGES---------RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGS 192 EK+ Q ++ RSG + +V+ + L+ +P++++ + Sbjct: 135 LNEMEEKIVQQFQDYTDTEEASDENRRRSGTKDEDKVVLP-LEENVLVDNLGIPMIVLVT 193 Query: 193 KFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 K D +DF E I + +R +GA+L +TS K + ++ + Sbjct: 194 KTDCMLSLEKDRDFHDEHFDFIQQHIRRYCLKHGAALFYTSVKENKNCNLFLKYVLHKIY 253 Query: 247 GTERPKSISTDPSKPLAIPAGSDSLSQIG 275 G + IP+G DS+ +IG Sbjct: 254 GLPFKSPALVVDKDSVFIPSGWDSMKKIG 282 >gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 52.4 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 66/299 (22%), Positives = 113/299 (37%), Gaps = 44/299 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+ L+R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPTGKNVLLLGEDGAGKTS-LIRRIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R V+K+ ++ E + QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRRATAA 215 Query: 171 HKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L +P+L+V +K D D+ E I +R Sbjct: 216 QEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 276 LQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG 334 >gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 [Bos taurus] gi|86438315|gb|AAI12622.1| Similar to Dynein light intermediate chain 1, cytosolic (Dynein light chain A) (DLC-A) [Bos taurus] Length = 524 Score = 52.0 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 76/335 (22%), Positives = 131/335 (39%), Gaps = 54/335 (16%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+ L+R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTS-LIRKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDPYHKGLLKFSLDAISLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLH------KDYP------- 175 ++++ R ++K+ + E + +Q++ R +D+P Sbjct: 156 WTALDSLQKWASVVREHIDKLKIPPE---EMKEMEQKLVRDFQEYVEPGEDFPASPQRRS 212 Query: 176 -----DRE-----------LISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLR 213 DR+ L VP+L+V +K D D+ E I +R Sbjct: 213 TASQEDRDDSVLLPLGADTLTQNLGVPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 YGA+LI+ S K + +I Q +G + IPAG D+ + Sbjct: 273 KFCLQYGAALIYASVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKK 332 Query: 274 IGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHE 307 IG + TL A++ F D+ K + F HE Sbjct: 333 IG---ILHENFQTLKAEDNFEDIITKPPVRKFVHE 364 >gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|73919260|sp|Q8R1Q8|DC1L1_MOUSE Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|19484061|gb|AAH23347.1| Dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|74198263|dbj|BAE35301.1| unnamed protein product [Mus musculus] gi|148677352|gb|EDL09299.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] Length = 523 Score = 51.6 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 68/302 (22%), Positives = 118/302 (39%), Gaps = 50/302 (16%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+ L+R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPTGKNVLLLGEDGAGKTS-LIRRIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLH------KDYP------- 175 ++++ R V+K+ + E + +Q++ R +D+P Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPE---EMKEMEQKLIRDFQEYVEPGEDFPASPQRRT 212 Query: 176 -----DR-----------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLR 213 DR L +P+L+V +K D D+ E I +R Sbjct: 213 TGAQEDRGDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 YGA+LI+TS K + +I Q +G + IPAG D+ + Sbjct: 273 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKK 332 Query: 274 IG 275 IG Sbjct: 333 IG 334 >gi|157863075|gb|ABV90642.1| cytoplasmic dynein light intermediate chain [Tetrahymena thermophila] Length = 457 Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 58/285 (20%), Positives = 118/285 (41%), Gaps = 54/285 (18%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDETAKPTL-----------------ALEYTFGRRARG 82 + V +G++ GK T++ E +T P + AL+Y + Sbjct: 29 KQVLVLGTRGTGKRTLIDSLHEISQTIYPKIRSNEMQSGKLRIAGSVSALDYVYLNVKNL 88 Query: 83 HNTPKDIAHLWELGGGI----SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESL 138 + +D + +LG I + S L+ I + + V + ++LDLS+P E ++ Sbjct: 89 DDQDEDT--MAKLGFYIIDEETQSQLLPIVLKQNTVKDTLITIMLDLSEPWTFMEQLDKW 146 Query: 139 LGSARNQVEKVCAALQKTGESRSGKQRVPR-----VLHKD-------------------- 173 + N ++ + L+ + R+ +++ R VL D Sbjct: 147 IEMITNHLQSLQINLETLDQMRAKVEKLFRDYKEPVLDSDGKLVKSDTQISPEEEAELIK 206 Query: 174 ------YPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTS 227 P+ L S +P++I+ +K D+ + ++ +++ LR YGASL+FTS Sbjct: 207 LKSSVPLPEGSLTSNLGIPIVILANKSDLIAQSNDQQSQIVLYYLRKYCLQYGASLVFTS 266 Query: 228 SKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 SK++ ++ ++ +G + + IP+GSD+L+ Sbjct: 267 SKNQESLEIYYEYMLHTLYGFKNKNKSEIYTIDSIFIPSGSDNLN 311 >gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon nigroviridis] Length = 463 Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 40/294 (13%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKD---IA 90 + PS + + G GKTT++ + LE E K LEY + H+ +D Sbjct: 13 SKLPSGKNILVFGEDGSGKTTLMAK-LEGAEHNKKGRGLEYLY---LSVHDEDRDDLTRC 68 Query: 91 HLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV---- 146 ++W L G + L++ ++A ++S V V+D+S+P + ++++ R+ + Sbjct: 69 NVWILDGDLYHKGLLKFAVSAKSLSDCLAVFVVDMSRPWIIMDSLQKWSSVLRDHLDKLK 128 Query: 147 ----------EKVCAALQKTGE-----SRSGKQRVPRVLHKD-----YPDRELISPFPVP 186 +K+ A Q+ E S S ++R P + + L +P Sbjct: 129 IEPDVMREMEQKMVKAFQEYSEPEDANSSSPQRRAPTAGEDEAVVLPLGENTLTHNLGIP 188 Query: 187 LLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 +L+V +K D D+ E I +R YGA L +TS K E + + Sbjct: 189 VLVVCTKCDAVSVLEKEHDYKEEHFDFIQSHIRKFCLQYGAGLFYTSVKEEKNLDLLYKY 248 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFD 294 I + + + IP+G D+ +I ++ T+ ++PF+ Sbjct: 249 IVHKLYDFQFTTPALVVEKDAVFIPSGWDNEKKIA---ILHENLSTVRPEDPFE 299 >gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974436|ref|XP_001184479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 483 Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 118/312 (37%), Gaps = 55/312 (17%) Query: 14 AAEVRSRESRTDEEEAEE------------EDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 +A+ S E D++E + + PS +++ +G GKTT+L R L+ Sbjct: 8 SAKASSAEKENDDDEPQNLWTSILSEVSSHSSSKLPSCKSILVLGEDETGKTTLLSR-LQ 66 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G DL++ +TADN+ + V++ Sbjct: 67 GVEDPKKGYGLEYLYLDVRDEDRDDTTRCGVWILAGENEHEDLLRYALTADNLEHMLVII 126 Query: 122 VLDLSKPNALWETMESL----------LGSARNQVEKVCAALQK------------TGES 159 +D+ +P W M+SL + S R EK+ Q+ TG+ Sbjct: 127 AVDMCRP---WNIMDSLQKWTQVIRRHVDSLRIPPEKLRELEQRLVQQFQAYTEPETGQD 183 Query: 160 RSGKQRVPRVLHKDYPDRELISPFP-----------VPLLIVGSKFDIF------QDFDS 202 S +R V + E P VP+++V +K D QD+ Sbjct: 184 SSVTRRTSGVTKPTGAEDEEAVVLPLGETTLTHNLGVPIVVVVTKSDYVNTLEKEQDYSD 243 Query: 203 EKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPL 262 E + + +R YGA+L + S K ++ + + L Sbjct: 244 EHLDFLQQNVRKFCLNYGAALFYVSVKENKNCDLLNRYLLHRLYDFPFNSAALVVEKDAL 303 Query: 263 AIPAGSDSLSQI 274 +P+G D+L ++ Sbjct: 304 FVPSGWDNLQKV 315 >gi|123390419|ref|XP_001299882.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121880822|gb|EAX86952.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 192 Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 45/225 (20%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +GS GKTT+++++ + E TL +++ R+ NTP +I +W++GG Sbjct: 10 IALIGSSMVGKTTLMVKYCKGTFSEDYIATLGVQF-LERQITVKNTPVNIV-IWDIGGQK 67 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 S D+ +P+ D L + + DLS +L AL+ +S Sbjct: 68 SFMDM--LPVCCDGAHVL--IFMFDLSNITSL-------------------TALRDWYKS 104 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 RV +VG+KFD++ + E++ I + A Sbjct: 105 AYDCNPSARVF------------------LVGNKFDLYFEQTEEEKIAITNKAKKFAQAI 146 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 GA L++ S+ + K I FG + +DP++P+ I Sbjct: 147 GAPLMYCSNTHSINVKKLFQLIIAQVFGLDPRIEQCSDPNEPIVI 191 >gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic, light intermediate polypeptide 2 [Macaca mulatta] Length = 497 Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 63/305 (20%), Positives = 112/305 (36%), Gaps = 49/305 (16%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKTGE-------------------SRSGKQRVPR 168 P + E+++ R ++K+ +K E S ++R P Sbjct: 142 PWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPL 201 Query: 169 VLHKDYP-------DRELISPFPVPLLIVGSKFDIF-----------QDFDSEKRKVICK 210 D D L +P+L+V +K F + ++ Sbjct: 202 TSGSDEENVALPLGDNVLTHNLGIPVLVVCTKVRARGLLAWLGSGSEHAFREKNVRIFDS 261 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 LR YGA+LI+TS K E + +I +G + IPAG D+ Sbjct: 262 HLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDN 321 Query: 271 LSQIG 275 +I Sbjct: 322 EKKIA 326 >gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin light chain A [Ornithorhynchus anatinus] Length = 471 Score = 48.1 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 69/315 (21%), Positives = 128/315 (40%), Gaps = 43/315 (13%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKD 88 ++ +H ++ T + G GKT+++ + DE K +EY + + Sbjct: 4 SQAPSSHLLAKGTAWGQGEDGAGKTSLIGKMQGIDEYKKGR-GMEYLYLNVHDEDRDDQT 62 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 ++W L G + L++ + A+++ V+LV+D+SKP ++++ R ++K Sbjct: 63 RCNVWILDGDLYHKGLLKFAMDANSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHIDK 122 Query: 149 VCAALQKTGESRSGKQRVPRVLH------KDYP--------------DRELISP------ 182 + + E + +Q++ R +D+P D +I P Sbjct: 123 LKIPPE---EMKEMEQKLIRDFQEYIEPGEDFPASPQRRNTTSQEDKDDSVILPLGADTL 179 Query: 183 ---FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 +P+L+V +K D D+ E I +R YGA+LI+TS K Sbjct: 180 TYNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKN 239 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 + +I Q +G + IPAG D+ +IG + TL A++ F Sbjct: 240 IDLVYKYIVQKLYGFPFKIPAVVVEKDAVFIPAGWDNDKKIG---ILHENFQTLKAEDSF 296 Query: 294 -DLWKKVFEKVFPHE 307 D+ K + F HE Sbjct: 297 EDIIIKPPVRKFVHE 311 >gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] gi|11992258|gb|AAG42486.1|AF317841_1 cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] Length = 508 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 114/300 (38%), Gaps = 47/300 (15%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V +G GKT+++ + L+ E K Sbjct: 38 LWSSILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGK-LQGIEEYKK 85 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 +EY + + ++W L G + L++ NV ++LV+D+S+P Sbjct: 86 GRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIMLVVDMSRP 145 Query: 129 NALWETMESLLGSARNQVEKVCAA------------------LQKTGESRSGKQRVPRVL 170 ++++ R ++K+ ++ E + QR R Sbjct: 146 WLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASPQR--RNT 203 Query: 171 HKDYPDRELISPFP---------VPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 + D +I P +P+++V +K D D+ E I +R Sbjct: 204 SSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQSHIRKF 263 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K + +I Q +G + + IPAG D+ +IG Sbjct: 264 CLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMPAVVVEKDAVFIPAGWDNDKKIG 323 >gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] Length = 508 Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 114/300 (38%), Gaps = 47/300 (15%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V +G GKT+++ + L+ E K Sbjct: 38 LWSSILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGK-LQGIEEYKK 85 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 +EY + + ++W L G + L++ NV ++LV+D+S+P Sbjct: 86 GRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIMLVVDMSRP 145 Query: 129 NALWETMESLLGSARNQVEKVCAA------------------LQKTGESRSGKQRVPRVL 170 ++++ R ++K+ ++ E + QR R Sbjct: 146 WLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASPQR--RNT 203 Query: 171 HKDYPDRELISPFP---------VPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 + D +I P +P+++V +K D D+ E I +R Sbjct: 204 SSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQSHIRKF 263 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K + +I Q +G + + IPAG D+ +IG Sbjct: 264 CLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMPAVVVEKDAVFIPAGWDNDRKIG 323 >gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-intermediate chain [Xenopus laevis] gi|28280005|gb|AAH45030.1| Dnclic1-prov protein [Xenopus laevis] Length = 508 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 114/300 (38%), Gaps = 47/300 (15%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P + V +G GKT+++ + L+ E K Sbjct: 38 LWSSILSEVSTRSR-----------SKLPFGKNVLLLGEDGAGKTSLIGK-LQGIEEYKK 85 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 +EY + + ++W L G + L++ + +V ++LV+D+S+P Sbjct: 86 GRGMEYLYINVHDDDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIMLVVDMSRP 145 Query: 129 NALWETMESLLGSARNQVEKVCAA------------------LQKTGESRSGKQRVPRVL 170 ++++ R V+K+ ++ E + QR R Sbjct: 146 WLALDSLQKWASVIREHVDKLKIPPEEMREMEERIVRHFQEYVEPGDELPTSPQR--RNT 203 Query: 171 HKDYPDRELISPFP---------VPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 D D +I P +P+++V +K D D+ E I +R Sbjct: 204 SSDECDDSVILPLADDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQSHIRKF 263 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K + +I Q +G + + IPAG D+ +IG Sbjct: 264 CLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFKMPAVVVEKDAVFIPAGWDNDKKIG 323 >gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 [Xenopus tropicalis] gi|111305599|gb|AAI21354.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Xenopus tropicalis] Length = 508 Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 112/298 (37%), Gaps = 43/298 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V +G GKT+++ + L+ E K Sbjct: 38 LWSSILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGK-LQGIEEYKK 85 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 +EY + + ++W L G + L++ + +V ++LV+D+S+P Sbjct: 86 GRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIMLVVDMSRP 145 Query: 129 NALWETMESLLGSARNQVEK--------------VCAALQKTGESRSGKQRVP--RVLHK 172 ++++ R V+K + Q+ E P R Sbjct: 146 WLALDSLQKWASVIREHVDKLKIPPEEMKEMEEKIVRNFQEYVEPGEEFPASPQKRNTSS 205 Query: 173 DYPDRELISPFP---------VPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 D D +I P +P+++V +K D D+ E I +R Sbjct: 206 DEQDDSVILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQSHIRKFCL 265 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 266 QYGAALIYTSIKENKNIDIVYKYIVQQLYGFLFNMPAVVVEKDAVFIPAGWDNDKKIG 323 >gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light chain A [Gallus gallus] gi|2494217|sp|Q90828|DC1L1_CHICK Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) (LIC57/59) gi|510249|emb|CAA55698.1| dyenin light chain A [Gallus sp.] Length = 515 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 69/332 (20%), Positives = 129/332 (38%), Gaps = 48/332 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS ++V +G GKT+++ + ++ E K Sbjct: 38 LWSCILSEVSTRSR-----------SKLPSGKSVLLLGEDGAGKTSLIGK-IQGIEEYKK 85 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 +EY + + ++ L G + L++ + A+++ ++LV+D+S+P Sbjct: 86 GRGMEYLYLNVHDEDRDDQTRCNVRILDGDLYHKGLLKFAMEANSLKDTLIMLVVDMSRP 145 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R ++K+ ++ E + QR L Sbjct: 146 WTAMDSLQKWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQRRNTSL 205 Query: 171 HKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L +P+++V +K D D+ E I +R Sbjct: 206 QEDKDDSVILPLGADTLTCNLGIPVVVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRRFC 265 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 266 LQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFNVPAVVVEKDAVFIPAGWDNDKKIG- 324 Query: 277 PVATEVDIGTLHAKNPF-DLWKKVFEKVFPHE 307 + TL A++ F D +K + F HE Sbjct: 325 --ILHENFQTLKAEDSFEDSIRKPPVRKFVHE 354 >gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosophila melanogaster] gi|24641224|ref|NP_727500.1| Dlic2 CG1938-PC, isoform C [Drosophila melanogaster] gi|24641226|ref|NP_727501.1| Dlic2 CG1938-PD, isoform D [Drosophila melanogaster] gi|16182605|gb|AAL13531.1| GH06357p [Drosophila melanogaster] gi|22832089|gb|AAF48011.2| CG1938-PA, isoform A [Drosophila melanogaster] gi|22832090|gb|AAN09288.1| CG1938-PC, isoform C [Drosophila melanogaster] gi|22832091|gb|AAN09289.1| CG1938-PD, isoform D [Drosophila melanogaster] Length = 493 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 108/297 (36%), Gaps = 39/297 (13%) Query: 13 AAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLAL 72 AAAE + S E + PS ++V +G A GKTT++ + L+ E K L Sbjct: 23 AAAEKENLWSAILNEVQTQGSTKLPSNKSVLVLGDNATGKTTLIAK-LQGVEDPKKGSGL 81 Query: 73 EYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALW 132 EY + + +W L G ++L+ + N + V+L + +++P W Sbjct: 82 EYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQP---W 138 Query: 133 ETMESL------LG--------------SARNQVEKVCAALQKTGESRSGKQRVPRVLHK 172 +E L LG +AR ++ + + G+ V R + Sbjct: 139 GWLEQLNHWIKVLGQHIDSLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRTMRN 198 Query: 173 DYPDRELISPFPVPLLIVGSKFDIF---------------QDFDSEKRKVICKTLRFLAH 217 + D + + P LI DI ++ E I + +R Sbjct: 199 NSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCL 258 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 +G SL +TS K + ++ +G + IPAG DSL +I Sbjct: 259 RHGTSLFYTSVKEDKNCDVLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLKKI 315 >gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein light intermediate chain 2, partial [Equus caballus] Length = 490 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 59/259 (22%), Positives = 98/259 (37%), Gaps = 44/259 (16%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 32 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 79 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 80 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSR 139 Query: 128 PNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP--RVLH 171 P + E+++ R ++K+ Q E G Q P R Sbjct: 140 PWTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEPEEGCQGSPQRRGPL 199 Query: 172 KDYPDRE----------LISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFL 215 PD E L +P+L+V +K D D+ E I LR Sbjct: 200 TSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRRF 259 Query: 216 AHFYGASLIFTSSKSETTM 234 YGA+LI TS K ++ Sbjct: 260 CLQYGAALIDTSVKEAKSL 278 >gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632687|emb|CAM56700.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 489 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 112/296 (37%), Gaps = 41/296 (13%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V MG GKTT++ + +E K Sbjct: 32 LWSSILSEVSTRSR-----------SKLPSGKNVVVMGEVGSGKTTLVAKLQGVEEYMKG 80 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + + W L G + L + I+ +N+ ++ V+DLS+P Sbjct: 81 R-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSRP 139 Query: 129 NALWETMESLLGSARNQVEK--------------VCAALQKTGESRSGKQRVPRVLHKDY 174 ++++ R+ V+K + Q+ E S VP+ + + Sbjct: 140 WLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQRRNPES 199 Query: 175 PDRELISP---------FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + ++ P +P+++V +K D D+ E I +R Y Sbjct: 200 DEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIRRFCLQY 259 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 GA+L++TS K + ++ +G + IP+G D+ +I Sbjct: 260 GAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEKKIA 315 >gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light intermediate chain 1 [Danio rerio] gi|94733316|emb|CAK11123.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632686|emb|CAM56699.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 501 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 112/296 (37%), Gaps = 41/296 (13%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V MG GKTT++ + +E K Sbjct: 34 LWSSILSEVSTRSR-----------SKLPSGKNVVVMGEVGSGKTTLVAKLQGVEEYMKG 82 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + + W L G + L + I+ +N+ ++ V+DLS+P Sbjct: 83 R-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSRP 141 Query: 129 NALWETMESLLGSARNQVEK--------------VCAALQKTGESRSGKQRVPRVLHKDY 174 ++++ R+ V+K + Q+ E S VP+ + + Sbjct: 142 WLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQRRNPES 201 Query: 175 PDRELISP---------FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + ++ P +P+++V +K D D+ E I +R Y Sbjct: 202 DEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIRRFCLQY 261 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 GA+L++TS K + ++ +G + IP+G D+ +I Sbjct: 262 GAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEKKIA 317 >gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] Length = 485 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 112/296 (37%), Gaps = 41/296 (13%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V MG GKTT++ + +E K Sbjct: 28 LWSSILSEVSTRSR-----------SKLPSGKNVVVMGEVGSGKTTLVAKLQGVEEYMKG 76 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + + W L G + L + I+ +N+ ++ V+DLS+P Sbjct: 77 R-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSRP 135 Query: 129 NALWETMESLLGSARNQVEK--------------VCAALQKTGESRSGKQRVPRVLHKDY 174 ++++ R+ V+K + Q+ E S VP+ + + Sbjct: 136 WLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQRRNPES 195 Query: 175 PDRELISP---------FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + ++ P +P+++V +K D D+ E I +R Y Sbjct: 196 DEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIRRFCLQY 255 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 GA+L++TS K + ++ +G + IP+G D+ +I Sbjct: 256 GAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEKKIA 311 >gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [Caenorhabditis briggsae] gi|39587719|emb|CAE58657.1| Hypothetical protein CBG01826 [Caenorhabditis briggsae] Length = 391 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 69/274 (25%), Positives = 113/274 (41%), Gaps = 43/274 (15%) Query: 41 TVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELG---G 97 TV +G GK+++L R + D ++KP L Y R N +D ++ ++LG Sbjct: 48 TVIVLGDNRCGKSSLLARLDKSDRSSKPKSLLGY---RVLHVQNDARDASYAYQLGTAGA 104 Query: 98 GISLSDLVQIPITA--DNVSFLS------------VVLVLDLS--KPNAL-----WETM- 135 ++ S+L+QIP+ + N S S VV +L S PN + W + Sbjct: 105 NLNPSELLQIPVWSLDGNESCASLLKYALPATPSEVVFILSASIDNPNLINSLKRWANVC 164 Query: 136 ---------ESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL--HKDYPDRE--LISP 182 + L + RNQ E++ +S V H P + LI Sbjct: 165 TEQAQKHFSKEDLKAGRNQQERMWQEYVDPVQSHMSTSVVGSFADEHSLLPLDQGTLIEN 224 Query: 183 FPVPLLIVGSKFDIF--QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 V ++V +K D+ ++F + I LR L GA+LIFTS+K + + + Sbjct: 225 CGVTFMVVITKSDLVLGKEFTDAQFAKISIQLRKLCLSLGATLIFTSTKESKNIQLLQKY 284 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 I +FGT + + +PAG D +I Sbjct: 285 IVHRSFGTAFTSAAQVIERDSIFVPAGWDGEKKI 318 >gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] gi|21615437|emb|CAC42262.2| Hypothetical protein C39E9.14b [Caenorhabditis elegans] gi|21684779|emb|CAD37351.1| Hypothetical protein C39E9.14b [Caenorhabditis elegans] Length = 441 Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 109/272 (40%), Gaps = 41/272 (15%) Query: 41 TVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL---GG 97 TV +G GK+++L R + D T KP L Y R N +D ++ ++L G Sbjct: 48 TVIVLGDNRSGKSSLLSRLDKSDRTVKPKSLLGY---RVLHVQNDARDASYAYQLGTAGA 104 Query: 98 GISLSDLVQIPI-----TADNVSFLS-----------VVLVLDLSKPNAL-----WETM- 135 ++ S+L+QIP+ A S L +L + PN + W + Sbjct: 105 NLNPSELLQIPVWSLDGNAACASLLKHALPATPAEAIFILTASIDNPNLIHSLKRWANVC 164 Query: 136 ---------ESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL--HKDYPDRE--LISP 182 + L + R+Q EK+ +S+ V H P + L Sbjct: 165 TEQAQKHFTKEDLKAGRSQQEKMWQEYVDPVQSQMSTSVVGSFADEHNLLPLDQGTLTEN 224 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 V ++V +K D+ ++F + I LR GA+L+FTS+K + + +I Sbjct: 225 CGVTFMVVITKSDLGKEFTDAQFAKISIQLRKFCLSLGATLVFTSAKETKNIQLLQKYIV 284 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 +FGT + + + +PAG D +I Sbjct: 285 HRSFGTAFTSAAQVIERESIFVPAGWDGEKKI 316 >gi|71401049|ref|XP_803244.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70866044|gb|EAN81798.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 112 Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 11/104 (10%) Query: 262 LAIPAGSDSLSQIGPPVATEVDIGTLHAKN--PFDLWKKVFEKVFPHESTRERKELKDPV 319 L IP+ +D+ + IG P + D+G L + D WK + +FP + + +R + + Sbjct: 1 LVIPS-ADTFADIGEPAVS--DMGGLQSTGDAELDRWKAPLDAMFPAKQSEDRMQNDSFL 57 Query: 320 K------DPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 K + F EP +D++R QK+ EL+QY++ K KS D Sbjct: 58 KRLYDTGENGFGEPTVDAVRKQKEDELEQYRKSAFKREKSTKDD 101 >gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A isoform 1 [Pan troglodytes] Length = 472 Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 69/298 (23%), Positives = 120/298 (40%), Gaps = 43/298 (14%) Query: 46 GSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLV 105 G GKT+ L+R ++ E K LEY + + ++W L G + L+ Sbjct: 23 GEDGAGKTS-LIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLL 81 Query: 106 QIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQR 165 + + A ++ V+LV+D+SKP ++++ R V+K+ + E + +Q+ Sbjct: 82 KFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPE---EMKQMEQK 138 Query: 166 VPRVLH------KDYP--------------DRELISP---------FPVPLLIVGSKFDI 196 + R +D+P D ++ P +P+L+V +K D Sbjct: 139 LIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDA 198 Query: 197 F------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTER 250 D+ E I +R YGA+LI+TS K + +I Q +G Sbjct: 199 ISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPY 258 Query: 251 PKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHE 307 + IPAG D+ +IG + TL A++ F D+ K + F HE Sbjct: 259 KIPAVVVEKDAVFIPAGWDNDKKIG---ILHENFQTLKAEDNFEDIITKPPVRKFVHE 313 >gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoobscura] gi|54643019|gb|EAL31763.1| GA15140-PA [Drosophila pseudoobscura] Length = 499 Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 107/297 (36%), Gaps = 39/297 (13%) Query: 13 AAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLAL 72 AAAE + S E + P+ ++V +G A GKTT++ + L+ E K L Sbjct: 25 AAAEKENLWSAILNEVQTQGSTKLPANKSVLVLGDNATGKTTLIAK-LQGVEDPKKGSGL 83 Query: 73 EYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALW 132 EY + + +W L G ++L+ + N + V+L + +++P W Sbjct: 84 EYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHFALNETNYAHTLVILTVSMTQP---W 140 Query: 133 ETMESL------LGS--------------ARNQVEKVCAALQKTGESRSGKQRVPRVLHK 172 +E L LG AR ++ + + G+ V R + Sbjct: 141 GWLEQLNHWIKVLGQHIESLPLEAKDKEMARQRLATTWQSYCEVGDDLDPGSPVKRTMRN 200 Query: 173 DYPDRELISPFPVPLLIVGSKFDIF---------------QDFDSEKRKVICKTLRFLAH 217 + D + + P LI DI ++ E I + +R Sbjct: 201 NSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRSFCL 260 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 GASL +TS K + ++ +G + IPAG DSL +I Sbjct: 261 RTGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLKKI 317 >gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938-PA, isoform A [Apis mellifera] Length = 470 Score = 44.7 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 60/302 (19%), Positives = 114/302 (37%), Gaps = 44/302 (14%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 + D LW AEV++ S PS + + +G GKTT++ + L+ E Sbjct: 25 NKDNLWSSILAEVQNSSSNK-----------LPSNKNILVLGDNESGKTTLIAK-LQGVE 72 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LE+ + + + +W L G ++L++ + A+ V+LV Sbjct: 73 DPKKGSGLEFAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLRFALNAERFPHTLVMLVAA 132 Query: 125 LSKPNALWETMESLLGSARNQVEKV---------CAALQKTG-----------ESRSGKQ 164 ++ P A+ + ++S + ++K+ C L + S + Sbjct: 133 MTTPWAILDQLQSWAALLGDHIDKLPLDNDTWQRCRQLNVKKWQDYTEPGDELDPGSPLR 192 Query: 165 RVPRVLHKD------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 R R L D P+ L + + +++V +K D D+ E I + + Sbjct: 193 RTSRNLDDDTMDNLPLPEGVLTTNLGLDVVVVITKTDYMSTLEKEHDYKDEHFDFIQQWI 252 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA L +TS+K + ++ + + IPAG D++ Sbjct: 253 RRFCLQYGAGLFYTSAKEDKNCDLLYKYLTHRIYSLPFRTPALVVEKDAVLIPAGWDNMK 312 Query: 273 QI 274 +I Sbjct: 313 KI 314 >gi|124783774|gb|ABN14940.1| dynein light chain-A variant [Taenia asiatica] Length = 277 Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 63/125 (50%), Gaps = 9/125 (7%) Query: 159 SRSGKQRVPRVLHKDYP--DRELISPFPVPLLIVGSKFDIFQDFD------SEKRKVICK 210 +R K+ V VL K+ P LI+ +PL++V +K D+ D + E+ +I Sbjct: 1 TRRSKKTVSDVL-KELPITPGALINNLGIPLVVVVTKTDVMDDMERKQGMSEEQYDLIQM 59 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+L++ S+K+ ++++ +G+ ++ + IPAG DS Sbjct: 60 HIRRFCLSYGAALVYVSAKNGKNCGLLKNYLQHRIYGSPFTQNAYVIDKDSVFIPAGWDS 119 Query: 271 LSQIG 275 L++IG Sbjct: 120 LNKIG 124 >gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Dictyostelium discoideum AX4] gi|60462801|gb|EAL61001.1| dynein light intermediate chain [Dictyostelium discoideum AX4] Length = 504 Score = 43.9 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 6/126 (4%) Query: 28 EAEEEDAHFPSQRTVFFMGSKAGGKTTILLRF--LERDETAKPTLALEYTFGRRARGHNT 85 E+ ++ +F +R V +G GK+ +L +F + E+ K ++AL YTF + Sbjct: 18 ESSNKNNYF-EKRDVAILGDPTSGKSLLLSKFDTVSNVESLK-SIALSYTFSDIYEDDTS 75 Query: 86 PKDIAHL--WELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSAR 143 + + W L G S +DL++ + +N+ V++ LD S+P L E+++ LG Sbjct: 76 EDPVGRINYWSLEGEASQNDLLKFSLNKENIKNCMVIITLDFSQPWNLVESLKKWLGILE 135 Query: 144 NQVEKV 149 ++ + Sbjct: 136 EHIKSI 141 Score = 42.4 bits (98), Expect = 0.051, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%) Query: 179 LISPFPVPLLIVGSKFD----IFQDFD--SEKRKVICKTLRFLAHFYGASLIFTSSKSET 232 LI+ VP+L+ K D + +DFD E I + LR + YGA LI+TS++ E Sbjct: 228 LINNLGVPILVACCKSDSVVMLEKDFDYKDELFDYIQQYLRRICLQYGAGLIYTSARKEI 287 Query: 233 TMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 + +I + FG E + +PAG D+L++I Sbjct: 288 NCGVTLEYIENILFGFELKSKTQLIEKDQIFVPAGWDTLAKI 329 >gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] Length = 209 Score = 43.1 bits (100), Expect = 0.028, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 19/169 (11%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD 176 P + E+++ R ++K+ +K E + R KD+ D Sbjct: 142 PWTVMESLQKWASVLREHIDKMKIPPEKMRE-------LERKFVKDFQD 183 >gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT00034450001 [Paramecium tetraurelia strain d4-2] gi|124399480|emb|CAK64972.1| unnamed protein product [Paramecium tetraurelia] Length = 425 Score = 42.7 bits (99), Expect = 0.039, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 12/172 (6%) Query: 113 NVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG-KQRVPRVLH 171 N+ VV+ LD+ +P E ++ +G ++ + + +L + E +S Q + ++ Sbjct: 106 NIKNTFVVIALDMQEPWTFMEDLDRWIGVLQDMMADLRLSLNELEEMKSNVMQYMSQMDG 165 Query: 172 KDYPDRELISPFPVPLLIVGSKFDIFQDFDS-----EKRKVICKTLRFLAHFYGASLIFT 226 + L + +PL+++ +K DI + D +K ++I LR YGA+L+FT Sbjct: 166 GQAHEGLLKTNLGIPLMVMVNKSDILERDDKGKDWDQKAEIIQFCLRQFCVNYGATLLFT 225 Query: 227 SSKSETTMSKSRSFI----NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 S K + + ++ + F T + K++S S L IP G D ++ I Sbjct: 226 SVKQKINIKVMYEYVLHRLYNMPFETSQHKNLSDFES--LFIPLGQDDINII 275 >gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_a [Rattus norvegicus] Length = 455 Score = 42.4 bits (98), Expect = 0.043, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 12/142 (8%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKV 149 P + E+++ R ++K+ Sbjct: 142 PWTIMESLQKWASVLREHIDKM 163 >gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_b [Mus musculus] Length = 458 Score = 42.4 bits (98), Expect = 0.045, Method: Composition-based stats. Identities = 31/142 (21%), Positives = 62/142 (43%), Gaps = 12/142 (8%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 +LW +EV +R + PS + + G GKTT++ + L+ E K Sbjct: 34 SLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHGK 81 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 LEY + ++W L G + L++ ++A+++ V+ V D+S+ Sbjct: 82 KGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMSR 141 Query: 128 PNALWETMESLLGSARNQVEKV 149 P + E+++ R ++K+ Sbjct: 142 PWTIMESLQKWASVLREHIDKM 163 >gi|146164455|ref|XP_001013126.2| Ras family protein [Tetrahymena thermophila SB210] gi|146145792|gb|EAR92881.2| Ras family protein [Tetrahymena thermophila SB210] Length = 681 Score = 42.0 bits (97), Expect = 0.063, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 117/288 (40%), Gaps = 57/288 (19%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDETAKPTL-----------------ALEYTFGRRARG 82 + V +G++ GK T++ E +T P + AL+Y + Sbjct: 29 KQVLVLGTRGTGKRTLIDSLHEISQTIYPKIRSNEMQSGKLRIAGSVSALDYVYLNVKNL 88 Query: 83 HNTPKDIAHLWELGGGI----SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESL 138 + +D + +LG I + S L+ I + + V + ++LDLS+P E ++ Sbjct: 89 DDQDEDT--MAKLGFYIIDEETQSQLLPIVLKQNTVKDTLITIMLDLSEPWTFMEQLDKW 146 Query: 139 LGSARNQVEKVCAALQKTGESRSGKQRVPR-----VLHKD----------YPDRE----- 178 + N ++ + L+ + R+ +++ R VL D P+ E Sbjct: 147 IEMITNHLQSLQINLETLDQMRAKVEKLFRDYKEPVLDSDGKLVKSDTQISPEEEAELIK 206 Query: 179 LISPFPVPLLIVGS--------------KFDIFQDFDSEKRKVICKTLRFLAHFYGASLI 224 L S P+P + S K D+ + ++ +++ LR YGASL+ Sbjct: 207 LKSSVPLPEGSLTSNLVYKETYRFLNQIKSDLIAQSNDQQSQIVLYYLRKYCLQYGASLV 266 Query: 225 FTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 FTSSK++ ++ ++ +G + + IP+GSD+L+ Sbjct: 267 FTSSKNQESLEIYYEYMLHTLYGFKNKNKSEIYTIDSIFIPSGSDNLN 314 >gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, isoform A [Tribolium castaneum] Length = 475 Score = 42.0 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 118/315 (37%), Gaps = 42/315 (13%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 PS + V +G GKTTI+ + L+ E K LEY + + + +W L Sbjct: 32 LPSCKQVLVLGDNECGKTTIVAK-LQGVEDPKKGSGLEYAYIDVRDDYRDDQTRLSVWVL 90 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETME-----------------SL 138 G +DL++ + + V+L + ++ P ++ E ++ L Sbjct: 91 DGDPGHTDLLKFALNEETFQHTLVILTVTMTAPWSILEQLQHWASVLADHLDKLKLDVDL 150 Query: 139 LGSARNQVEKVCAALQKTGES---RSGKQRVPRVL---------HKDYPDRELISPFPVP 186 + R + K+ + G+ S +R R P+ L + + Sbjct: 151 RQNRRQHIVKMWQEYVEPGDELDPASPMKRSSRNFGDGEDGLEEQTSLPEGTLTNNLGLD 210 Query: 187 LLIVGSKFDIFQ------DFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 +++V +K D Q D+ E + + +R YGA+L +TS+K + + Sbjct: 211 IVVVVTKTDYIQTLEKEHDYRDEHLDFMQQWIRKFCLQYGAALFYTSAKEDKNCDLLYKY 270 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 + +G + IPAG D++++I + LH P D ++ + Sbjct: 271 LTHRIYGFPFRTPALVVEKDAVFIPAGWDNMNKI------RILYENLHTCKPDDYFRDII 324 Query: 301 EKVFPHESTRERKEL 315 + ++ EL Sbjct: 325 VQPATRKTINRETEL 339 >gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] gi|21615436|emb|CAA94342.2| Hypothetical protein C39E9.14a [Caenorhabditis elegans] gi|21684778|emb|CAA97773.2| Hypothetical protein C39E9.14a [Caenorhabditis elegans] Length = 443 Score = 41.6 bits (96), Expect = 0.077, Method: Composition-based stats. Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 43/274 (15%) Query: 41 TVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL---GG 97 TV +G GK+++L R + D T KP L Y R N +D ++ ++L G Sbjct: 48 TVIVLGDNRSGKSSLLSRLDKSDRTVKPKSLLGY---RVLHVQNDARDASYAYQLGTAGA 104 Query: 98 GISLSDLVQIPI-----TADNVSFLS-----------VVLVLDLSKPNAL-----WETM- 135 ++ S+L+QIP+ A S L +L + PN + W + Sbjct: 105 NLNPSELLQIPVWSLDGNAACASLLKHALPATPAEAIFILTASIDNPNLIHSLKRWANVC 164 Query: 136 ---------ESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL--HKDYPDRE--LISP 182 + L + R+Q EK+ +S+ V H P + L Sbjct: 165 TEQAQKHFTKEDLKAGRSQQEKMWQEYVDPVQSQMSTSVVGSFADEHNLLPLDQGTLTEN 224 Query: 183 FPVPLLIVGSKFDIF--QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 V ++V +K D+ ++F + I LR GA+L+FTS+K + + + Sbjct: 225 CGVTFMVVITKSDLVLGKEFTDAQFAKISIQLRKFCLSLGATLVFTSAKETKNIQLLQKY 284 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 I +FGT + + + +PAG D +I Sbjct: 285 IVHRSFGTAFTSAAQVIERESIFVPAGWDGEKKI 318 >gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] Length = 433 Score = 39.7 bits (91), Expect = 0.29, Method: Composition-based stats. Identities = 52/260 (20%), Positives = 100/260 (38%), Gaps = 30/260 (11%) Query: 45 MGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDL 104 MG GKTT++ + +E K LEY + + + W L G + L Sbjct: 1 MGEVGSGKTTLVAKLQGVEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGL 59 Query: 105 VQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK--------------VC 150 + I+ +N+ ++ V+DLS+P ++++ R+ V+K + Sbjct: 60 QKFAISLENLEDSLILFVVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLT 119 Query: 151 AALQKTGESRSGKQRVPRVLHKDYPDRELISP---------FPVPLLIVGSKFDIF---- 197 Q+ E S VP+ + + + ++ P +P+++V +K D Sbjct: 120 KQFQEYVEPGSDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLE 179 Query: 198 --QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 D+ E I +R YGA+L++TS K + ++ +G Sbjct: 180 KEHDYKDEHLDFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQ 239 Query: 256 TDPSKPLAIPAGSDSLSQIG 275 + IP+G D+ +I Sbjct: 240 VVEKDSVFIPSGWDNEKKIA 259 >gi|45190737|ref|NP_984991.1| AER132Wp [Ashbya gossypii ATCC 10895] gi|44983716|gb|AAS52815.1| AER132Wp [Ashbya gossypii ATCC 10895] Length = 232 Score = 39.7 bits (91), Expect = 0.33, Method: Composition-based stats. Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 47/224 (20%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT++++++++ DE TL + Y R + I + +LGG Sbjct: 20 LIGDAQVGKTSLMVKYVQNVFDEEYTQTLGVHYL--ERKINLGSTDVIFSIMDLGGQREF 77 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 ++ +P+ ++ ++++ + DL++P ET+ S+ R Q G + + Sbjct: 78 INM--LPLVSNRA--VAIIFLFDLTRP----ETLTSIREWYR----------QARGFNET 119 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 +PLL VG+K+D+F + D ++ + KT A GA Sbjct: 120 A----------------------IPLL-VGTKYDLFVNLDVAYQEELSKTSMRYAQVMGA 156 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFG-TERPKSISTDPSKPLAI 264 L+F S+ S + K I AF T R I D PL I Sbjct: 157 PLVFCSTASSINVQKIFKVIIAKAFNLTLRIPEIK-DMGDPLLI 199 >gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00000001598 [Nasonia vitripennis] Length = 486 Score = 39.3 bits (90), Expect = 0.37, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 114/306 (37%), Gaps = 48/306 (15%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 + D LW A+V++ + PS + V +G GKTT++ + L+ E Sbjct: 26 NEDNLWSSILAQVQN-----------SSNNKLPSNKNVLVLGDNESGKTTLIAK-LQGVE 73 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + + +W L G ++L++ + A V+LV Sbjct: 74 DPKKGSGLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLKFALNAKRFPNTLVMLVAA 133 Query: 125 LSKPNALWETME---SLLG------------------SARNQVEKVCAALQKTGESR--- 160 ++ P AL + ++ +LG R Q++K + G+ Sbjct: 134 MTTPWALLDQLQFWSRVLGDHIDKLASDNDDFKQTWQDCRQQIKKKWQDYTEPGDDLDPG 193 Query: 161 SGKQRVPRVLHKD------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVI 208 S +R R L + PD L + + +++V +K D D+ E + Sbjct: 194 SPLRRTSRNLDDESVDNLPLPDGVLTTNLGLDIVVVITKTDYMSTLEKEHDYRDEHFDFM 253 Query: 209 CKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 + +R YGA L +TS K + ++ + + IPAG Sbjct: 254 QQWIRRFCLQYGAGLFYTSVKEDKNCDLLYKYLTHRIYSLPFRTPALVVEKDAVLIPAGW 313 Query: 269 DSLSQI 274 D++ +I Sbjct: 314 DNMKKI 319 >gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT00031450001 [Paramecium tetraurelia strain d4-2] gi|124395704|emb|CAK61219.1| unnamed protein product [Paramecium tetraurelia] Length = 435 Score = 39.3 bits (90), Expect = 0.39, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 12/172 (6%) Query: 113 NVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSG-KQRVPRVLH 171 N+ VV+ LD+ +P E ++ + ++ + + +L + E ++ Q + ++ Sbjct: 106 NIKNTFVVIALDMQEPWTFMEDLDRWISVLQDMMADLRLSLNELEEMKANVMQYMSQMDG 165 Query: 172 KDYPDRELISPFPVPLLIVGSKFDIFQDFDS-----EKRKVICKTLRFLAHFYGASLIFT 226 + L + +PL+++ +K DI + D +K ++I LR YGA+L+FT Sbjct: 166 GQAHEGLLKTNLGIPLMVMVNKSDILERDDKGKDWDQKAEIIQFCLRQFCVNYGATLLFT 225 Query: 227 SSKSETTMSKSRSFI----NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 S K + + ++ + F T + K++S S L IP G D ++ I Sbjct: 226 SVKQKINIKVMYEYVLHRLYNMPFETSQHKNLSDFES--LFIPLGQDDINII 275 >gi|154279596|ref|XP_001540611.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150412554|gb|EDN07941.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 550 Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 70/184 (38%), Gaps = 18/184 (9%) Query: 10 WDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPT 69 W + V+ RE++ + E + H V MG GKTT+L RD + Sbjct: 26 WKGVSVTVKDRETKKPKAILENSNGHANPGEVVVLMGPSGSGKTTLLNVLAHRDSASGAE 85 Query: 70 LALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPN 129 + E R T ++I+ + D++ +T + + L L S P Sbjct: 86 IEGEILVNGRKIDLETFRNISSY------VEQEDILVGALTVEETLYFCAQLSLPSSVPK 139 Query: 130 A-LWETMESLLGS--ARNQVEKVCAALQKTGESRSGKQRV---------PRVLHKDYPDR 177 E + +LL + +NQ + + + G S K+RV P+++ D P Sbjct: 140 KERLERISTLLNAFGIQNQAKTLIGTPIRKGISGGQKRRVSVASQLITCPKIIFLDEPTS 199 Query: 178 ELIS 181 L S Sbjct: 200 GLDS 203 >gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae str. PEST] gi|157018577|gb|EAA06916.4| AGAP000723-PA [Anopheles gambiae str. PEST] Length = 470 Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 57/287 (19%), Positives = 103/287 (35%), Gaps = 46/287 (16%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E + + PS ++V +G A GKTT++ + L+ E K LEY + + Sbjct: 6 EVQTQSNTKLPSNKSVLVLGDNASGKTTLIAK-LQGVEDPKKGSGLEYAYIDVRDEYRDD 64 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 +W L G ++L++ + N V+L L ++ P + + ++ + + + Sbjct: 65 VTRLSVWILDGDPGHNNLLKFALNEQNFPHTLVILTLSMTTPWSWVDQLQHWMKILDDHI 124 Query: 147 ---------EKVCAALQKT--------------GESRSGKQRVPRVLHKDYPDRELIS-P 182 ++ C A T G R+P V D EL + P Sbjct: 125 AGLKIDPEEKQQCQARLTTEWQNYCETIDDLDPGSPIKRTNRLPSV------DDELDALP 178 Query: 183 FPVPLLIVGSKFDIFQ---------------DFDSEKRKVICKTLRFLAHFYGASLIFTS 227 P +L D+ D+ E + + +R YGASL +TS Sbjct: 179 LPEGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQWIRRFCLMYGASLFYTS 238 Query: 228 SKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 K + ++ +G + IPAG D++ +I Sbjct: 239 VKEDKNCDLLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDNMKKI 285 >gi|157128066|ref|XP_001661298.1| dynein light intermediate chain [Aedes aegypti] gi|108872707|gb|EAT36932.1| dynein light intermediate chain [Aedes aegypti] Length = 494 Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 61/305 (20%), Positives = 111/305 (36%), Gaps = 53/305 (17%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 + LW +EV+++ S PS ++V +G A GKTT++ + L+ E Sbjct: 29 ENLWSAILSEVQTQSS-----------TKLPSNKSVLVLGDNASGKTTLIAK-LQGVEDP 76 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + + +W L G ++L++ + N + V+L L ++ Sbjct: 77 KKGSGLEYAYIDVRDEYRDDVTRLGVWILDGDPGHTNLLKYALNETNYAHTLVILTLSMT 136 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKTGESRSG-KQR-------------------- 165 P + + +E + + + A L+ E R +QR Sbjct: 137 TPWSWVDQLEHWIKMLDDHI----AGLKIDPEERQQCRQRLVTVWQSYCDTIDELDPGSP 192 Query: 166 VPRVLHKDYPDRELIS-PFPVPLLIVGSKFDIFQ---------------DFDSEKRKVIC 209 + R D +L + P P +L D+ D+ E + Sbjct: 193 IKRTNRLSSVDDDLDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQ 252 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 + +R YGASL +TS K + ++ +G + IPAG D Sbjct: 253 QWIRRFCLVYGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRTPALIVEKDAVLIPAGWD 312 Query: 270 SLSQI 274 ++ +I Sbjct: 313 NMKKI 317 >gi|158602493|gb|EDP38908.1| dynein light intermediate chain, putative [Brugia malayi] Length = 469 Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 25/129 (19%) Query: 41 TVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAH--------- 91 T+ F+G++ GK+ +L R LE+ ET+ ALEY F H +D+++ Sbjct: 49 TILFLGNRQSGKSWLLNR-LEKRETSGRGSALEYHF---LNVHTDYRDVSYAYQLASAGA 104 Query: 92 -----------LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLG 140 +W L G ++ + LV+ +TA +S V+L + +P A+ ++ + Sbjct: 105 GVAPGESVTLPVWVLDGDVAFAPLVKFALTAP-LSKSIVILCASMQEPGAVLPSLNKWVK 163 Query: 141 SARNQVEKV 149 +Q+E + Sbjct: 164 VISDQIENI 172 >gi|45387873|ref|NP_991296.1| RAB, member of RAS oncogene family-like 3 [Danio rerio] gi|125826183|ref|XP_001331659.1| PREDICTED: hypothetical protein [Danio rerio] gi|125826245|ref|XP_001336967.1| PREDICTED: hypothetical protein [Danio rerio] gi|37362248|gb|AAQ91252.1| hypothetical protein MGC23920-like protein [Danio rerio] gi|50603856|gb|AAH78191.1| Rabl3 protein [Danio rerio] gi|159570269|emb|CAP19613.1| RAB, member of RAS oncogene family-like 3 [Danio rerio] Length = 233 Score = 37.4 bits (85), Expect = 1.6, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 38/196 (19%) Query: 42 VFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGH--NTPKDIA---HLWELG 96 V +G GK++++ + P+ + + R + TP++ A LW++G Sbjct: 9 VLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYREGTPEEKAFYIELWDVG 68 Query: 97 GGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 G + + V+ S ++LV DL+ S++N AL K Sbjct: 69 GSVGSASSVKSTRAVFYNSVNGIILVHDLTNKK-----------SSQNLYRWSLEALSKD 117 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFD----------------IFQDF 200 S +G V + DY DRE + VPLL++G+KFD + +DF Sbjct: 118 -SSPTGII----VSNGDY-DREQFAENAVPLLLIGTKFDQIPENKRNDVLTRTAFLSEDF 171 Query: 201 DSEKRKVICKTLRFLA 216 ++E+ + C R+LA Sbjct: 172 NAEEINLDCTNPRYLA 187 >gi|157818459|ref|NP_001035505.1| breast cancer and salivary gland expression [Macaca mulatta] gi|62736034|gb|AAX97427.1| BASE [Macaca mulatta] Length = 229 Score = 36.2 bits (82), Expect = 3.5, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 15/110 (13%) Query: 223 LIFTSSKSETTMSKSRSFINQLAFGTERP------KSISTDPSKPLAIPAGSDSLSQIGP 276 L+ +SS E S +N L G R ++IS S A S L +GP Sbjct: 14 LLASSSAQEVLAGVSSQLLNDLTQGLLRADFLPSLQTISLQKSLSSAFDVVSGLLDILGP 73 Query: 277 PVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSE 326 P+ E+D + KNP L + EST +RKE V+ P SE Sbjct: 74 PLTNEIDTVRIQVKNPQLLQVSI-------ESTPQRKEAT--VRVPFISE 114 >gi|149731285|ref|XP_001502422.1| PREDICTED: hypothetical protein [Equus caballus] Length = 236 Score = 35.8 bits (81), Expect = 4.9, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 38/196 (19%) Query: 42 VFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHN--TPKDIAH---LWELG 96 V +G GK++++ + P+ + + R + TP++ + LW++G Sbjct: 9 VLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDVG 68 Query: 97 GGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 G + + V+ S ++LV DL+ ++ ++L R +E + L T Sbjct: 69 GSVGSASSVKSTRAVFYNSVNGIILVHDLTNK----KSSQNLY---RWSLEALNRDLVPT 121 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFD----------------IFQDF 200 G V + DY DRE + +PLL++G+K D + +DF Sbjct: 122 G---------VLVTNGDY-DREQFADNQIPLLVIGTKLDQIHETKRHEVLTRTAFLAEDF 171 Query: 201 DSEKRKVICKTLRFLA 216 ++E+ + C R+LA Sbjct: 172 NAEEINLDCTNPRYLA 187 >gi|38257945|sp|Q86YQ2|LATH_HUMAN Latherin precursor (Breast cancer and salivary gland-expressed protein) gi|27652613|gb|AAO17728.1| BASE [Homo sapiens] gi|46575638|gb|AAH69128.1| Breast cancer and salivary gland expression gene [Homo sapiens] gi|46854765|gb|AAH69315.1| Breast cancer and salivary gland expression gene [Homo sapiens] gi|118764217|gb|AAI28242.1| BASE protein [Homo sapiens] gi|119596740|gb|EAW76334.1| breast cancer and salivary gland expression gene [Homo sapiens] Length = 179 Score = 35.8 bits (81), Expect = 5.0, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 13/98 (13%) Query: 223 LIFTSSKSETTMSKSRSFINQLAFGTER----PKSISTDPSKPL--AIPAGSDSLSQIGP 276 L+ +SS E S +N L G R P +T KPL A S L GP Sbjct: 14 LLVSSSAQEVLAGVSSQLLNDLTQGLLRADFLPSLQTTGLQKPLSSAFDGVSGLLDIFGP 73 Query: 277 PVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKE 314 P+ E++ ++ KNP L + EST +RKE Sbjct: 74 PLTNEINTVSIQVKNPQLLHVSI-------ESTPQRKE 104 >gi|70732320|ref|YP_262076.1| DNA-binding response regulator [Pseudomonas fluorescens Pf-5] gi|68346619|gb|AAY94225.1| DNA-binding response regulator [Pseudomonas fluorescens Pf-5] Length = 236 Score = 35.0 bits (79), Expect = 6.9, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 10/121 (8%) Query: 142 ARNQVEKVCAALQKTGESRSGKQRVPRVLHK------DYPDRELISPFPVPLLIVGSKFD 195 AR + +V A L++ GE+R VPR L K D REL SP V + + +FD Sbjct: 105 ARELLARVRAVLRRAGENRPVSADVPRPLIKFADWQLDLTRRELRSPDQVMIPLSAGEFD 164 Query: 196 IFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 + F ++++ + + L G + + +S+ R +L F T+RP I Sbjct: 165 LLLVFVEHPQRILTRE-QLLDLARGQAHDAFDRSIDVQVSRLR---RKLEFDTKRPAMIR 220 Query: 256 T 256 T Sbjct: 221 T 221 >gi|50303633|ref|XP_451758.1| unnamed protein product [Kluyveromyces lactis] gi|49640890|emb|CAH02151.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140] Length = 223 Score = 35.0 bits (79), Expect = 7.2, Method: Composition-based stats. Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 45/197 (22%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GKT++++++++ DE TL + Y + G + I + +LGG Sbjct: 19 VGLIGDAQVGKTSLMVKYVQNVFDEEYTQTLGVHYLERKVVLG--STDVIFSIMDLGGQR 76 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 ++ +P+ ++ +++V + DL++P ET+ S+ R Sbjct: 77 EFINM--LPLVSEGA--VAIVFLFDLTRP----ETLNSIKEWYRQA-------------- 114 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 + + D + ++VG+K+D+F D D E ++ + +T A Sbjct: 115 ------------RGFNDTAIS-------ILVGTKYDLFVDMDPEYQENVSRTAMKYAQVM 155 Query: 220 GASLIFTSSKSETTMSK 236 + LIF S++S + K Sbjct: 156 KSPLIFCSTQSSINVQK 172 >gi|17542952|ref|NP_501609.1| RAB family member (rab-28) [Caenorhabditis elegans] gi|3880725|emb|CAA21582.1| Hypothetical protein Y11D7A.4 [Caenorhabditis elegans] Length = 248 Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G A GKT+I RF + D++ TL L++ F RR + + + +W++GG Sbjct: 38 IVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDF-FSRRITLPHEMQVLVQVWDIGGQS 96 Query: 100 SLSDLVQIPITADNVSFL 117 +++ +T N+ FL Sbjct: 97 IAGEMIDKYLTGANIVFL 114 >gi|149568878|ref|XP_001508253.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 235 Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 81/196 (41%), Gaps = 38/196 (19%) Query: 42 VFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHN--TPKDIAH---LWELG 96 V +G GK++++ + P+ + + R + TP++ + LW++G Sbjct: 8 VLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTYYIELWDVG 67 Query: 97 GGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 G + ++ V+ + ++LV DL+ S++N AL + Sbjct: 68 GSVGSANSVKNTRAVFYNAVNGIILVHDLTNKK-----------SSQNLYRWSLEALNRD 116 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFD----------------IFQDF 200 G V V DY DRE + +PLL++G+K D + +DF Sbjct: 117 ----QGPTGV-LVTGGDY-DREQFADNQLPLLVIGTKLDQIPEGKRHEVLTRTAFLAEDF 170 Query: 201 DSEKRKVICKTLRFLA 216 ++E+ + C LR+LA Sbjct: 171 NAEEINLDCTHLRYLA 186 >gi|71018751|ref|XP_759606.1| hypothetical protein UM03459.1 [Ustilago maydis 521] gi|46099364|gb|EAK84597.1| hypothetical protein UM03459.1 [Ustilago maydis 521] Length = 746 Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 20/131 (15%) Query: 185 VPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 +P+++V +K D +DF E+ I + LR + YGA+L +TSS ++ R Sbjct: 359 IPIVVVCTKADAIARLERDKDFKEEQFDYIQQVLRTICMKYGAALFYTSSVRAQSIDILR 418 Query: 239 SFINQLAFGTERPKSI----------STDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLH 288 S++ F P SI ST PS + AG ++ G +T D TL Sbjct: 419 SYLLHRLF---TPSSIGSQQQTDSGNSTAPSAQTSAAAGGVAVFGFGYRAST-TDRDTLL 474 Query: 289 AKNPFDLWKKV 299 +D W K+ Sbjct: 475 VPAGWDSWGKI 485 >gi|156717510|ref|NP_001096295.1| hypothetical protein LOC100124869 [Xenopus tropicalis] gi|134025480|gb|AAI35595.1| LOC100124869 protein [Xenopus tropicalis] Length = 235 Score = 34.7 bits (78), Expect = 9.1, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 25/188 (13%) Query: 42 VFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHN--TPKDIAH---LWELG 96 V +G GK++++ + P+ + + R + TP++ + LW++G Sbjct: 9 VLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRLHEYREGTPEEKTYYIELWDVG 68 Query: 97 GGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 G + + V+ + ++LV DL+ ++ ++L R +E + LQ T Sbjct: 69 GSVGSASSVKSTRAVFYNAVNGIILVHDLTNK----KSSQNLY---RWSLEALNRDLQPT 121 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 G V + DY DRE + +PLL++G+K D Q ++++ +V+ +T FLA Sbjct: 122 G---------VLVTNGDY-DREQFADNQIPLLVIGTKLD--QIPEAKRSEVLTRT-AFLA 168 Query: 217 HFYGASLI 224 + A I Sbjct: 169 EDFNAEEI 176 >gi|126325747|ref|XP_001363389.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 236 Score = 34.7 bits (78), Expect = 9.4, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 38/196 (19%) Query: 42 VFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHN--TPKD---IAHLWELG 96 V +G GK++++ + P+ + + R + TP++ LW++G Sbjct: 9 VLVLGDSGVGKSSLVHLLCQNQVLGNPSWTVGCSVDVRVHDYKEGTPEEKTFYIELWDVG 68 Query: 97 GGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 G + + V+ S ++LV DL+ ++ ++L R +E V L + Sbjct: 69 GSVGGASSVKSTRAVFFNSVNGIILVHDLTNK----KSSQNLY---RWSLEAVNKDLVPS 121 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFD----------------IFQDF 200 G V + DY DRE + +PLL++G+K D + +DF Sbjct: 122 G---------VLVTNGDY-DREQFAENQIPLLVIGTKLDQIHEAKRNEVLTRIAFLAEDF 171 Query: 201 DSEKRKVICKTLRFLA 216 ++E+ + C R+LA Sbjct: 172 NAEEINLDCTNPRYLA 187 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light inter... 528 e-148 gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 ligh... 526 e-148 gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermed... 526 e-148 gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein... 525 e-147 gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain is... 524 e-147 gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light int... 523 e-147 gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain i... 522 e-146 gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Dan... 522 e-146 gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermed... 517 e-145 gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] 516 e-145 gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein... 515 e-144 gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 lig... 507 e-142 gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 ... 497 e-139 gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermed... 496 e-138 gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chai... 491 e-137 gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] 484 e-135 gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] 467 e-130 gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibencla... 441 e-122 gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella... 439 e-121 gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [S... 438 e-121 gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon n... 430 e-119 gi|157119433|ref|XP_001653379.1| conserved hypothetical protein ... 379 e-103 gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae s... 373 e-101 gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chai... 365 3e-99 gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated fa... 362 2e-98 gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [... 362 3e-98 gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Tr... 355 2e-96 gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melano... 345 4e-93 gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermed... 344 4e-93 gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin li... 343 1e-92 gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermedi... 342 2e-92 gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermed... 342 2e-92 gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A is... 342 2e-92 gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] 341 4e-92 gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light ... 341 4e-92 gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light inte... 340 6e-92 gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo s... 340 7e-92 gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculu... 340 8e-92 gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermed... 340 1e-91 gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein li... 339 2e-91 gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] 339 2e-91 gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light ... 338 3e-91 gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo s... 338 3e-91 gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light interme... 338 4e-91 gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermed... 337 5e-91 gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermed... 337 6e-91 gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermedi... 337 9e-91 gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light int... 336 1e-90 gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 ... 336 1e-90 gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light int... 336 2e-90 gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light ... 335 2e-90 gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light interme... 335 4e-90 gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 ligh... 335 4e-90 gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [D... 333 9e-90 gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light int... 332 2e-89 gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] 332 2e-89 gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoob... 332 3e-89 gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light inter... 329 2e-88 gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-interm... 327 6e-88 gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-interm... 325 2e-87 gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] 324 7e-87 gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Tr... 323 1e-86 gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon n... 322 2e-86 gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [G... 320 1e-85 gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light inte... 319 2e-85 gi|146097038|ref|XP_001468017.1| dynein light intermediate chain... 316 1e-84 gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin li... 314 6e-84 gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein... 314 6e-84 gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] 312 4e-83 gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00... 311 5e-83 gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic,... 310 7e-83 gi|157874331|ref|XP_001685649.1| dynein light intermediate chain... 308 3e-82 gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon n... 306 2e-81 gi|154343515|ref|XP_001567703.1| dynein light intermediate chain... 302 3e-80 gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 ... 299 2e-79 gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermedia... 298 3e-79 gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermedi... 298 3e-79 gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_002... 288 4e-76 gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light int... 283 1e-74 gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella... 267 1e-69 gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [S... 264 5e-69 gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain i... 245 5e-63 gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Tr... 244 7e-63 gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermed... 243 2e-62 gi|123423641|ref|XP_001306418.1| conserved hypothetical protein ... 234 8e-60 gi|123415018|ref|XP_001304608.1| conserved hypothetical protein ... 224 8e-57 gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT0001... 220 1e-55 gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT0000... 216 2e-54 gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermedi... 202 3e-50 gi|115690607|ref|XP_001202918.1| PREDICTED: similar to Dynein, c... 197 1e-48 gi|157863075|gb|ABV90642.1| cytoplasmic dynein light intermediat... 196 3e-48 gi|26252194|gb|AAH40558.1| DYNC2LI1 protein [Homo sapiens] 169 2e-40 gi|57092883|ref|XP_531798.1| PREDICTED: similar to dynein 2 ligh... 166 2e-39 gi|123390419|ref|XP_001299882.1| small GTP-binding protein, puta... 147 8e-34 gi|158597036|gb|EDP35273.1| dynein 2 light intermediate chain, p... 141 5e-32 gi|158599820|gb|EDP37275.1| hypothetical protein Bm1_12090 [Brug... 110 2e-22 Sequences not found previously or not previously below threshold: gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light... 335 2e-90 gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 ... 328 3e-88 gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A... 311 4e-83 gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate ... 302 3e-80 gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] 301 4e-80 gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light inte... 301 4e-80 gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein li... 287 9e-76 gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] 273 9e-72 gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermedi... 266 1e-69 gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermed... 264 5e-69 gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, is... 241 4e-62 gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938... 235 3e-60 gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosoph... 229 1e-58 gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00... 228 3e-58 gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoob... 228 5e-58 gi|157128066|ref|XP_001661298.1| dynein light intermediate chain... 219 2e-55 gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae s... 216 2e-54 gi|119584836|gb|EAW64432.1| dynein, cytoplasmic 1, light interme... 205 5e-51 gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] 190 1e-46 gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light interme... 175 3e-42 gi|146164455|ref|XP_001013126.2| Ras family protein [Tetrahymena... 173 1e-41 gi|158602493|gb|EDP38908.1| dynein light intermediate chain, put... 166 2e-39 gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosoph... 162 2e-38 gi|158290784|ref|XP_312349.4| AGAP002589-PA [Anopheles gambiae s... 153 2e-35 gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Di... 149 2e-34 gi|125858836|gb|AAI29880.1| Dync1li1 protein [Mus musculus] 139 2e-31 gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT0003... 137 1e-30 gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT0003... 134 1e-29 gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain fam... 128 4e-28 gi|2618484|dbj|BAA23371.1| dynein light intermediate chain 53/55... 127 1e-27 gi|2618480|dbj|BAA23369.1| dynein light intermediate chain 53/55... 127 2e-27 gi|2618482|dbj|BAA23370.1| dynein light intermediate chain 53/55... 126 2e-27 gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain fam... 126 2e-27 gi|2618478|dbj|BAA23368.1| dynein light intermediate chain 53/55... 126 3e-27 gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [... 125 4e-27 gi|76162568|gb|AAX30491.2| SJCHGC04029 protein [Schistosoma japo... 123 2e-26 gi|124783774|gb|ABN14940.1| dynein light chain-A variant [Taenia... 114 1e-23 gi|134106957|ref|XP_777791.1| hypothetical protein CNBA4890 [Cry... 107 1e-21 gi|159106574|gb|EDP45457.1| hypothetical protein MGL_0446 [Malas... 107 2e-21 gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Cop... 106 2e-21 gi|58258773|ref|XP_566799.1| hypothetical protein [Cryptococcus ... 101 6e-20 gi|71401049|ref|XP_803244.1| dynein light intermediate chain [Tr... 101 6e-20 gi|71018751|ref|XP_759606.1| hypothetical protein UM03459.1 [Ust... 97 1e-18 gi|45190737|ref|NP_984991.1| AER132Wp [Ashbya gossypii ATCC 1089... 92 4e-17 gi|50303633|ref|XP_451758.1| unnamed protein product [Kluyveromy... 90 2e-16 gi|121713178|ref|XP_001274200.1| dynein light intermediate chain... 89 3e-16 gi|50293691|ref|XP_449257.1| unnamed protein product [Candida gl... 88 9e-16 gi|66802470|ref|XP_635107.1| small GTPase [Dictyostelium discoid... 85 6e-15 gi|6323576|ref|NP_013647.1| GTP-binding protein of the ras super... 85 8e-15 gi|71019857|ref|XP_760159.1| hypothetical protein UM04012.1 [Ust... 85 8e-15 gi|115398722|ref|XP_001214950.1| conserved hypothetical protein ... 85 8e-15 gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150... 85 9e-15 gi|145602494|ref|XP_359915.2| conserved hypothetical protein [Ma... 82 6e-14 gi|154285758|ref|XP_001543674.1| conserved hypothetical protein ... 82 7e-14 gi|85098809|ref|XP_960671.1| hypothetical protein [Neurospora cr... 82 8e-14 gi|157070013|gb|EAA31435.2| protein TEM1 [Neurospora crassa OR74A] 82 8e-14 gi|154298912|ref|XP_001549877.1| septum-promoting GTP-binding pr... 81 8e-14 gi|119174895|ref|XP_001239770.1| hypothetical protein CIMG_09391... 81 9e-14 gi|58270378|ref|XP_572345.1| small monomeric GTPase [Cryptococcu... 81 1e-13 gi|50420681|ref|XP_458877.1| hypothetical protein DEHA0D10417g [... 81 1e-13 gi|119479611|ref|XP_001259834.1| conserved hypothetical protein ... 81 1e-13 gi|116194005|ref|XP_001222815.1| hypothetical protein CHGG_06720... 81 1e-13 gi|68469427|ref|XP_721228.1| putative Ras family GTPase [Candida... 80 2e-13 gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus... 80 2e-13 gi|19114197|ref|NP_593285.1| GTPase Spg1 [Schizosaccharomyces po... 80 3e-13 gi|68468881|ref|XP_721499.1| putative Ras family GTPase [Candida... 80 3e-13 gi|116503902|gb|EAU86797.1| septum-promoting GTP-binding protein... 79 4e-13 gi|156842204|ref|XP_001644471.1| hypothetical protein Kpol_520p3... 79 5e-13 gi|121699736|ref|XP_001268133.1| GTP binding protein (SPG1), put... 78 7e-13 gi|119471324|ref|XP_001258159.1| GTP binding protein (SPG1), put... 78 8e-13 gi|67536988|ref|XP_662268.1| hypothetical protein AN4664.2 [Aspe... 77 2e-12 gi|50549767|ref|XP_502355.1| hypothetical protein [Yarrowia lipo... 77 2e-12 gi|159114236|ref|XP_001707343.1| Tem-1-like protein [Giardia lam... 77 2e-12 gi|28396142|gb|AAO39054.1| Tem-1-like protein [Giardia intestina... 77 2e-12 gi|83768709|dbj|BAE58846.1| unnamed protein product [Aspergillus... 76 3e-12 gi|2408103|emb|CAA04846.1| sid3 [Schizosaccharomyces pombe] 76 4e-12 gi|46135805|ref|XP_389594.1| hypothetical protein FG09418.1 [Gib... 75 7e-12 gi|67484658|ref|XP_657549.1| cell cycle-associated GTPase [Entam... 75 7e-12 gi|70992145|ref|XP_750921.1| GTP binding protein (SPG1), putativ... 74 1e-11 gi|145243196|ref|XP_001394138.1| hypothetical protein An11g01310... 74 1e-11 gi|150865994|ref|XP_001385439.2| predicted protein [Pichia stipi... 74 2e-11 gi|119183788|ref|XP_001242885.1| hypothetical protein CIMG_06781... 73 2e-11 gi|39971217|ref|XP_366999.1| hypothetical protein MGG_03075 [Mag... 73 3e-11 gi|70935784|ref|XP_738930.1| hypothetical protein PC000669.03.0 ... 73 4e-11 gi|156097140|ref|XP_001614603.1| hypothetical protein PVX_098765... 72 4e-11 gi|115399058|ref|XP_001215118.1| septum-promoting GTP-binding pr... 72 4e-11 gi|68066998|ref|XP_675470.1| hypothetical protein PB000846.00.0 ... 71 1e-10 gi|82594415|ref|XP_725415.1| dynein light intermediate chain 2, ... 71 2e-10 gi|154303178|ref|XP_001551997.1| hypothetical protein BC1G_09609... 70 3e-10 gi|85089469|ref|XP_957965.1| hypothetical protein [Neurospora cr... 70 3e-10 gi|117939049|dbj|BAF36678.1| Small G Protein RAB [Pyrsonympha gr... 68 1e-09 gi|117939057|dbj|BAF36682.1| Small G Protein RAB [Dinenympha exi... 67 1e-09 gi|117939047|dbj|BAF36677.1| Small G Protein RAB [Pyrsonympha gr... 67 1e-09 gi|117939059|dbj|BAF36683.1| Small G Protein RAB [Dinenympha exi... 67 2e-09 gi|117939043|dbj|BAF36675.1| Small G Protein RAB [Pyrsonympha gr... 66 3e-09 gi|117939061|dbj|BAF36684.1| Small G Protein RAB [Dinenympha exi... 66 6e-09 gi|14275892|dbj|BAB58892.1| Tem1-like protein [Giardia intestina... 65 7e-09 gi|154413508|ref|XP_001579784.1| hypothetical protein TVAG_26831... 64 1e-08 gi|149243794|ref|XP_001526528.1| septum-promoting GTP-binding pr... 64 1e-08 gi|124506681|ref|XP_001351938.1| hypothetical protein PFI0315c [... 64 1e-08 gi|33146727|dbj|BAC79616.1| putative Septum-promoting GTP-bindin... 63 3e-08 gi|125600478|gb|EAZ40054.1| hypothetical protein OsJ_023537 [Ory... 63 3e-08 gi|125558566|gb|EAZ04102.1| hypothetical protein OsI_025334 [Ory... 63 3e-08 gi|123473325|ref|XP_001319851.1| Ras family protein [Trichomonas... 63 3e-08 gi|67470492|ref|XP_651210.1| Rab family GTPase [Entamoeba histol... 63 4e-08 gi|156371538|ref|XP_001628820.1| predicted protein [Nematostella... 62 4e-08 gi|157069725|gb|EAA28729.2| hypothetical protein NCU09982 [Neuro... 61 1e-07 gi|158593583|gb|EDP32178.1| small GTP binding protein RAB28, put... 61 1e-07 gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japo... 61 2e-07 gi|123470795|ref|XP_001318601.1| small GTP-binding protein, puta... 60 3e-07 gi|118401353|ref|XP_001032997.1| Ras family protein [Tetrahymena... 59 4e-07 gi|109072481|ref|XP_001090737.1| PREDICTED: similar to Ras-relat... 59 4e-07 gi|15236081|ref|NP_195699.1| AtRABH1c (Arabidopsis Rab GTPase ho... 59 4e-07 gi|74831376|emb|CAI39292.1| rab_C68 [Paramecium tetraurelia] 59 6e-07 gi|145533477|ref|XP_001452483.1| hypothetical protein GSPATT0000... 58 9e-07 gi|19114161|ref|NP_593249.1| GTPase Ryh1 [Schizosaccharomyces po... 58 1e-06 gi|145510136|ref|XP_001441001.1| hypothetical protein GSPATT0000... 58 1e-06 gi|160705425|gb|EAT89750.2| hypothetical protein SNOG_03019 [Pha... 57 1e-06 gi|123456026|ref|XP_001315752.1| small GTP-binding protein, puta... 57 1e-06 gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 1089... 57 1e-06 gi|145549438|ref|XP_001460398.1| hypothetical protein GSPATT0000... 57 1e-06 gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ust... 57 2e-06 gi|123506780|ref|XP_001329276.1| Ras family protein [Trichomonas... 57 2e-06 gi|70998112|ref|XP_753786.1| dynein family protein [Aspergillus ... 57 2e-06 gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HO... 57 2e-06 gi|123479672|ref|XP_001322993.1| Ras family protein [Trichomonas... 57 2e-06 gi|123411399|ref|XP_001303883.1| small GTP-binding protein, puta... 57 2e-06 gi|145487073|ref|XP_001429542.1| hypothetical protein GSPATT0003... 57 3e-06 gi|115752504|ref|XP_001178826.1| PREDICTED: hypothetical protein... 57 3e-06 gi|118085220|ref|XP_425653.2| PREDICTED: similar to RAB38 [Gallu... 57 3e-06 gi|146079375|ref|XP_001463770.1| small GTP-binding protein Rab7,... 57 3e-06 gi|156392743|ref|XP_001636207.1| predicted protein [Nematostella... 57 3e-06 gi|1388197|gb|AAB02833.1| low-Mr GTP-binding protein Rab32 [Homo... 56 3e-06 gi|46130840|ref|XP_389151.1| hypothetical protein FG08975.1 [Gib... 56 3e-06 gi|54696892|gb|AAV38818.1| RAB32, member RAS oncogene family [sy... 56 3e-06 gi|5803133|ref|NP_006825.1| RAB32, member RAS oncogene family [H... 56 3e-06 gi|85014147|ref|XP_955569.1| GTP-binding protein [Encephalitozoo... 56 3e-06 gi|73987970|ref|XP_850212.1| PREDICTED: similar to Rab38, member... 56 3e-06 gi|118365218|ref|XP_001015830.1| Ras family protein [Tetrahymena... 56 3e-06 gi|157343673|emb|CAO68179.1| unnamed protein product [Vitis vini... 56 3e-06 gi|78057535|gb|ABB17267.1| secretion related GTPase C [Aspergill... 56 4e-06 gi|156844455|ref|XP_001645290.1| hypothetical protein Kpol_1037p... 56 4e-06 gi|67465559|ref|XP_648952.1| Rab family GTPase [Entamoeba histol... 56 4e-06 gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (jap... 56 4e-06 gi|72392985|ref|XP_847293.1| small GTP-binding protein Rab7, put... 56 4e-06 gi|145251179|ref|XP_001397103.1| hypothetical protein An15g05740... 56 4e-06 gi|123402494|ref|XP_001302063.1| small GTP-binding protein, puta... 56 4e-06 gi|123406273|ref|XP_001302762.1| small GTP-binding protein, puta... 56 4e-06 gi|123486327|ref|XP_001324695.1| Ras family protein [Trichomonas... 56 5e-06 gi|16741109|gb|AAH16409.1| RAB32, member RAS oncogene family [Mu... 56 5e-06 gi|83770344|dbj|BAE60477.1| unnamed protein product [Aspergillus... 55 5e-06 gi|71002422|ref|XP_755892.1| RAS small monomeric GTPase Rab6, pu... 55 5e-06 gi|145504759|ref|XP_001438346.1| hypothetical protein GSPATT0000... 55 5e-06 gi|157865487|ref|XP_001681451.1| small GTP-binding protein Rab7,... 55 5e-06 gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vini... 55 6e-06 gi|17542952|ref|NP_501609.1| RAB family member (rab-28) [Caenorh... 55 6e-06 gi|15224916|ref|NP_181989.1| RAB6; GTP binding [Arabidopsis thal... 55 7e-06 gi|123493610|ref|XP_001326326.1| small GTP-binding protein, puta... 55 7e-06 gi|21955138|ref|NP_665717.1| Rab38, member of RAS oncogene famil... 55 7e-06 gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanos... 55 8e-06 gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis t... 55 8e-06 gi|146075496|ref|XP_001462715.1| small GTP binding protein rab6-... 55 8e-06 gi|123410458|ref|XP_001303710.1| small GTP-binding protein, puta... 55 8e-06 gi|74833811|emb|CAI39365.1| rab_A32 [Paramecium tetraurelia] 55 8e-06 gi|156390336|ref|XP_001635227.1| predicted protein [Nematostella... 55 8e-06 gi|91081205|ref|XP_975613.1| PREDICTED: similar to Ras-related p... 55 9e-06 gi|145477535|ref|XP_001424790.1| hypothetical protein GSPATT0002... 55 9e-06 gi|145335857|ref|NP_173258.2| AtRABA6b (Arabidopsis Rab GTPase h... 55 9e-06 gi|118348502|ref|XP_001007726.1| Ras family protein [Tetrahymena... 55 9e-06 gi|156390340|ref|XP_001635229.1| predicted protein [Nematostella... 55 9e-06 gi|119918805|ref|XP_001252195.1| PREDICTED: similar to RAB38 iso... 55 1e-05 gi|58332248|ref|NP_001011276.1| RAB32, member RAS oncogene famil... 55 1e-05 gi|154333269|ref|XP_001562895.1| small GTP-binding protein Rab7,... 54 1e-05 gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis] 54 1e-05 gi|74204808|dbj|BAE35466.1| unnamed protein product [Mus musculus] 54 1e-05 gi|145543689|ref|XP_001457530.1| hypothetical protein GSPATT0002... 54 1e-05 gi|124359616|gb|ABD32281.2| Ras GTPase; Sigma-54 factor, interac... 54 1e-05 gi|91082557|ref|XP_974043.1| PREDICTED: similar to CG8024-PB, is... 54 1e-05 gi|125558411|gb|EAZ03947.1| hypothetical protein OsI_025179 [Ory... 54 1e-05 gi|125600315|gb|EAZ39891.1| hypothetical protein OsJ_023374 [Ory... 54 1e-05 gi|71745978|ref|XP_822225.1| small GTP binding protein rab6-like... 54 1e-05 gi|115768277|ref|XP_782114.2| PREDICTED: hypothetical protein [S... 54 1e-05 gi|13385896|ref|NP_080681.1| RAB32 [Mus musculus] >gnl|BL_ORD_ID... 54 1e-05 gi|126331533|ref|XP_001377752.1| PREDICTED: hypothetical protein... 54 1e-05 gi|134085738|ref|NP_001076909.1| hypothetical protein LOC519982 ... 54 1e-05 gi|12381851|emb|CAC24717.1| Sec4p [Pichia pastoris] 54 1e-05 gi|61366674|gb|AAX42891.1| RAB32 member RAS oncogene family [syn... 54 1e-05 gi|15219515|ref|NP_177505.1| AtRABA6a (Arabidopsis Rab GTPase ho... 54 1e-05 gi|110763177|ref|XP_001122592.1| PREDICTED: similar to CG8024-PC... 54 1e-05 gi|115472433|ref|NP_001059815.1| Os07g0522900 [Oryza sativa (jap... 54 1e-05 gi|126310667|ref|XP_001370750.1| PREDICTED: similar to RAB32 [Mo... 54 1e-05 gi|115312968|gb|AAI24015.1| Rab12 protein [Xenopus tropicalis] 54 2e-05 gi|46111195|ref|XP_382655.1| conserved hypothetical protein [Gib... 54 2e-05 gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus] 54 2e-05 gi|6984166|gb|AAF34783.1|AF228419_1 RAB6 protein [Toxoplasma gon... 54 2e-05 gi|66825191|ref|XP_645950.1| Rab GTPase [Dictyostelium discoideu... 54 2e-05 gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-... 54 2e-05 gi|147903317|ref|NP_001090131.1| hypothetical protein LOC735209 ... 54 2e-05 gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding pr... 54 2e-05 gi|21105857|ref|NP_082514.4| Rab38, member of RAS oncogene famil... 54 2e-05 gi|109108201|ref|XP_001104269.1| PREDICTED: similar to RAB38 [Ma... 54 2e-05 gi|147782540|emb|CAN75036.1| hypothetical protein [Vitis vinifer... 54 2e-05 gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p... 54 2e-05 gi|623586|gb|AAA74117.1| putative 54 2e-05 gi|126644156|ref|XP_001388214.1| RAB6 protein, putative [Cryptos... 54 2e-05 gi|76663090|ref|XP_606510.2| PREDICTED: similar to RAB32 [Bos ta... 54 2e-05 gi|75054786|sp|Q5R615|RB33B_PONPY Ras-related protein Rab-33B >g... 54 2e-05 gi|11641237|ref|NP_071732.1| RAB38 [Homo sapiens] >gnl|BL_ORD_ID... 54 2e-05 gi|33150768|gb|AAP97262.1|AF136172_1 rab-related GTP-binding pro... 54 2e-05 gi|71406977|ref|XP_805986.1| small GTP-binding protein Rab7 [Try... 54 2e-05 gi|71406428|ref|XP_805752.1| small GTP-binding protein Rab7 [Try... 54 2e-05 gi|126139533|ref|XP_001386289.1| Rab5-like GTPase [Pichia stipit... 54 2e-05 gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding pro... 54 2e-05 gi|118396092|ref|XP_001030389.1| Ras family protein [Tetrahymena... 54 2e-05 gi|67472102|ref|XP_651915.1| Rab family GTPase [Entamoeba histol... 54 2e-05 gi|54311161|gb|AAH36064.1| RAB33B, member RAS oncogene family [H... 54 2e-05 gi|154421140|ref|XP_001583584.1| Ras family protein [Trichomonas... 53 2e-05 gi|152012618|gb|AAI50366.1| Unknown (protein for IMAGE:7435314) ... 53 2e-05 gi|115472201|ref|NP_001059699.1| Os07g0496000 [Oryza sativa (jap... 53 2e-05 gi|118386344|ref|XP_001026291.1| Ras family protein [Tetrahymena... 53 2e-05 gi|111143508|gb|ABH06562.1| small Rab GTPase [Trichomonas vagina... 53 3e-05 gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlam... 53 3e-05 gi|117939079|dbj|BAF36693.1| Small G Protein RAB [Symbiotic prot... 53 3e-05 gi|15230422|ref|NP_187823.1| AtRABA4d (Arabidopsis Rab GTPase ho... 53 3e-05 gi|113475136|ref|YP_721197.1| Miro-like [Trichodesmium erythraeu... 53 3e-05 gi|15227173|ref|NP_179816.1| AtRABH1d (Arabidopsis Rab GTPase ho... 53 3e-05 gi|15238317|ref|NP_201304.1| AtRABH1a (Arabidopsis Rab GTPase ho... 53 3e-05 gi|123496307|ref|XP_001326936.1| small GTP-binding protein, puta... 53 3e-05 gi|50311935|ref|XP_455999.1| unnamed protein product [Kluyveromy... 53 3e-05 gi|6323291|ref|NP_013363.1| GTPase, Ras-like GTP binding protein... 53 3e-05 gi|157755227|ref|XP_001669957.1| Hypothetical protein CBG15075 [... 53 3e-05 gi|45361477|ref|NP_989315.1| RAB6A, member RAS oncogene family [... 53 3e-05 gi|134024040|gb|AAI35229.1| Rab12 protein [Xenopus tropicalis] 53 3e-05 gi|119573630|gb|EAW53245.1| hCG1996054, isoform CRA_d [Homo sapi... 53 3e-05 gi|157344707|emb|CAO70462.1| unnamed protein product [Vitis vini... 53 3e-05 gi|110749601|ref|XP_001120659.1| PREDICTED: similar to RAB28, me... 53 3e-05 gi|149698214|ref|XP_001502510.1| PREDICTED: hypothetical protein... 53 3e-05 gi|77681452|ref|NP_001029351.1| RAB6B, member RAS oncogene famil... 53 3e-05 gi|123975020|ref|XP_001330169.1| small GTP-binding protein, puta... 53 3e-05 gi|17553774|ref|NP_498993.1| RAB family member (rab-6.1) [Caenor... 53 3e-05 gi|157775947|ref|XP_001666039.1| Hypothetical protein CBG06854 [... 53 4e-05 gi|56753633|gb|AAW25019.1| SJCHGC09359 protein [Schistosoma japo... 53 4e-05 gi|145529147|ref|XP_001450362.1| hypothetical protein GSPATT0001... 53 4e-05 gi|114052040|ref|NP_001040211.1| Rab-related protein [Bombyx mor... 53 4e-05 gi|123234717|emb|CAM17123.1| RAB12, member RAS oncogene family [... 53 4e-05 gi|47228262|emb|CAG07657.1| unnamed protein product [Tetraodon n... 53 4e-05 gi|149632570|ref|XP_001509653.1| PREDICTED: similar to small GTP... 53 4e-05 gi|158295208|ref|XP_316080.4| AGAP006035-PA [Anopheles gambiae s... 53 4e-05 gi|117939075|dbj|BAF36691.1| Small G Protein RAB [Symbiotic prot... 52 4e-05 gi|123444682|ref|XP_001311109.1| Ras-like GTP-binding protein YP... 52 4e-05 gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica] 52 4e-05 gi|119918807|ref|XP_612709.3| PREDICTED: similar to RAB38 isofor... 52 4e-05 gi|126327830|ref|XP_001362365.1| PREDICTED: similar to RAB38 [Mo... 52 4e-05 gi|61806504|ref|NP_001013485.1| hypothetical protein LOC541339 [... 52 4e-05 gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic prot... 52 4e-05 gi|156838802|ref|XP_001643100.1| hypothetical protein Kpol_1029p... 52 4e-05 gi|145349021|ref|XP_001418939.1| predicted protein [Ostreococcus... 52 5e-05 gi|148233560|ref|NP_001086132.1| MGC83971 protein [Xenopus laevi... 52 5e-05 gi|13786129|ref|NP_112586.1| RAB33B, member RAS oncogene family ... 52 5e-05 gi|56605932|ref|NP_001008466.1| RAB33B, member RAS oncogene fami... 52 5e-05 gi|146183027|ref|XP_001025689.2| Ras family protein [Tetrahymena... 52 5e-05 gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interact... 52 5e-05 gi|123453541|ref|XP_001314747.1| small GTP-binding protein, puta... 52 5e-05 gi|159102818|gb|EDP41716.1| hypothetical protein MGL_3924 [Malas... 52 5e-05 gi|114596114|ref|XP_517445.2| PREDICTED: hypothetical protein [P... 52 5e-05 gi|149719243|ref|XP_001489548.1| PREDICTED: similar to Rab-relat... 52 5e-05 gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Pha... 52 5e-05 gi|85002141|gb|ABC68472.1| Rab6A [Marsupenaeus japonicus] 52 5e-05 gi|109073765|ref|XP_001098618.1| PREDICTED: similar to RAB28, me... 52 5e-05 gi|118722332|ref|NP_001073128.1| hypothetical protein LOC780839 ... 52 5e-05 gi|130502148|ref|NP_001076317.1| hypothetical protein LOC565931 ... 52 5e-05 gi|24639106|ref|NP_726743.1| Rab27 CG14791-PB, isoform B [Drosop... 52 5e-05 gi|50292103|ref|XP_448484.1| unnamed protein product [Candida gl... 52 5e-05 gi|66472490|ref|NP_001018466.1| hypothetical protein LOC553657 [... 52 5e-05 gi|149720174|ref|XP_001488539.1| PREDICTED: similar to small GTP... 52 5e-05 gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] 52 5e-05 gi|75055283|sp|Q5RFI2|RAB28_PONPY Ras-related protein Rab-28 >gn... 52 6e-05 gi|157822117|ref|NP_001102414.1| RAB33B, member of RAS oncogene ... 52 6e-05 gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus] 52 6e-05 gi|158186685|ref|NP_037149.1| RAB12, member RAS oncogene family ... 52 6e-05 gi|109075696|ref|XP_001088193.1| PREDICTED: similar to RAB33B, m... 52 6e-05 gi|108706608|gb|ABF94403.1| Ras-related protein Rab-6A, putative... 52 6e-05 gi|145534728|ref|XP_001453108.1| hypothetical protein GSPATT0001... 52 6e-05 gi|106507168|ref|NP_077768.2| RAB12, member RAS oncogene family ... 52 6e-05 gi|123485660|ref|XP_001324545.1| small GTP-binding protein, puta... 52 6e-05 gi|145534648|ref|XP_001453068.1| hypothetical protein GSPATT0001... 52 6e-05 gi|66508944|ref|XP_624576.1| PREDICTED: similar to Rab-related p... 52 6e-05 gi|148227273|ref|NP_001090835.1| RAB6B, member RAS oncogene fami... 52 6e-05 gi|123397256|ref|XP_001301054.1| small GTP-binding protein, puta... 52 6e-05 gi|47223036|emb|CAG07123.1| unnamed protein product [Tetraodon n... 52 6e-05 gi|118372409|ref|XP_001019401.1| Ras family protein [Tetrahymena... 52 6e-05 gi|123454517|ref|XP_001315011.1| small GTP-binding protein, puta... 52 6e-05 gi|60729663|pir||JC8006 Rab7 protein - sea anemone (Aiptasia pul... 52 7e-05 gi|50412303|ref|XP_457123.1| hypothetical protein DEHA0B03608g [... 52 7e-05 gi|117939077|dbj|BAF36692.1| Small G Protein RAB [Symbiotic prot... 52 7e-05 gi|110761970|ref|XP_001122072.1| PREDICTED: similar to chrowded ... 52 7e-05 gi|12844005|dbj|BAB26198.1| unnamed protein product [Mus musculus] 52 7e-05 gi|48766845|gb|AAT46563.1| Rab [Marsupenaeus japonicus] 52 7e-05 gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa] 52 7e-05 gi|125836149|ref|XP_001339908.1| PREDICTED: hypothetical protein... 52 7e-05 gi|145504913|ref|XP_001438423.1| hypothetical protein GSPATT0000... 52 7e-05 gi|126321829|ref|XP_001364776.1| PREDICTED: similar to RAB12, me... 52 7e-05 gi|160704612|gb|EAT90757.2| hypothetical protein SNOG_02545 [Pha... 52 7e-05 gi|145357850|ref|NP_196588.3| AtRABH1e (Arabidopsis Rab GTPase h... 52 7e-05 gi|110590290|pdb|2GIL|A Chain A, Structure Of The Extremely Slow... 52 8e-05 gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histol... 52 8e-05 gi|160707337|gb|EAT82672.2| hypothetical protein SNOG_10337 [Pha... 52 8e-05 gi|156542630|ref|XP_001604718.1| PREDICTED: similar to rab6 [Nas... 52 8e-05 gi|41056251|ref|NP_956417.1| hypothetical protein LOC386994 [Dan... 52 8e-05 gi|13195674|ref|NP_077249.1| RAB6A, member RAS oncogene family [... 52 8e-05 gi|156717362|ref|NP_001096221.1| hypothetical protein LOC1001247... 52 8e-05 gi|125836147|ref|XP_001339841.1| PREDICTED: hypothetical protein... 52 8e-05 gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis ... 52 8e-05 gi|123401357|ref|XP_001301845.1| small GTP-binding protein, puta... 52 8e-05 gi|157331739|emb|CAO66868.1| unnamed protein product [Vitis vini... 52 8e-05 gi|145488520|ref|XP_001430264.1| hypothetical protein GSPATT0003... 52 8e-05 gi|119907597|ref|XP_001252030.1| PREDICTED: similar to Rab6 prot... 52 8e-05 gi|126645710|ref|XP_001388049.1| Rab11, putative [Cryptosporidiu... 52 8e-05 gi|126327867|ref|XP_001363218.1| PREDICTED: similar to Rab6 prot... 52 8e-05 gi|17570073|ref|NP_510790.1| RAB family member (rab-6.2) [Caenor... 52 8e-05 gi|156121229|ref|NP_001095762.1| hypothetical protein LOC615804 ... 52 8e-05 gi|123374113|ref|XP_001297704.1| small GTP-binding protein, puta... 52 9e-05 gi|38679888|ref|NP_942599.1| RAB6A, member RAS oncogene family i... 52 9e-05 gi|47225306|emb|CAG09806.1| unnamed protein product [Tetraodon n... 52 9e-05 gi|157767730|ref|XP_001667345.1| Hypothetical protein CBG15944 [... 52 9e-05 gi|106507164|ref|NP_001020471.2| RAB12, member RAS oncogene fami... 51 9e-05 gi|154420577|ref|XP_001583303.1| Ras family protein [Trichomonas... 51 9e-05 gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase ho... 51 9e-05 gi|47087033|ref|NP_998530.1| hypothetical protein LOC406674 [Dan... 51 9e-05 gi|125828213|ref|XP_001331974.1| PREDICTED: similar to RAB6, mem... 51 9e-05 gi|123471387|ref|XP_001318893.1| small GTP-binding protein, puta... 51 9e-05 gi|83751822|gb|ABC42924.1| GTP-binding protein [Anas platyrhynchos] 51 9e-05 gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japo... 51 1e-04 gi|59897141|gb|AAX11937.1| Rab GTPase [Entamoeba histolytica] 51 1e-04 gi|1710015|sp|P51152|RAB12_CANFA Ras-related protein Rab-12 >gnl... 51 1e-04 gi|157875077|ref|XP_001685944.1| ras-related protein; small GTP-... 51 1e-04 gi|154422404|ref|XP_001584214.1| Ras family protein [Trichomonas... 51 1e-04 gi|50927456|gb|AAH78662.1| RAB6B protein [Homo sapiens] 51 1e-04 gi|66792866|ref|NP_001019711.1| RAB13, member RAS oncogene famil... 51 1e-04 gi|123487306|ref|XP_001324914.1| Ras family protein [Trichomonas... 51 1e-04 gi|30424655|ref|NP_776142.1| RAB6B, member RAS oncogene family [... 51 1e-04 gi|134118235|ref|XP_772218.1| hypothetical protein CNBM0510 [Cry... 51 1e-04 gi|157128524|ref|XP_001661468.1| low-Mr GTP-binding protein Rab3... 51 1e-04 gi|110591381|pdb|2FE4|A Chain A, The Crystal Structure Of Human ... 51 1e-04 gi|118138456|pdb|2IL1|A Chain A, Crystal Structure Of A Predicte... 51 1e-04 gi|156349251|ref|XP_001621980.1| hypothetical protein NEMVEDRAFT... 51 1e-04 gi|157358689|emb|CAO66374.1| unnamed protein product [Vitis vini... 51 1e-04 gi|157820973|ref|NP_001102372.1| hypothetical protein LOC365042 ... 51 1e-04 gi|157112176|ref|XP_001657425.1| rab6 [Aedes aegypti] >gnl|BL_OR... 51 1e-04 gi|145501753|ref|XP_001436857.1| hypothetical protein GSPATT0003... 51 1e-04 gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana] 51 1e-04 gi|8394133|ref|NP_058554.1| RAB33B, member of RAS oncogene famil... 51 1e-04 gi|73535745|pdb|1Z06|A Chain A, Gppnhp-Bound Rab33 Gtpase 51 1e-04 gi|74202820|dbj|BAE37491.1| unnamed protein product [Mus musculus] 51 1e-04 gi|74215202|dbj|BAE41825.1| unnamed protein product [Mus musculus] 51 1e-04 gi|91094319|ref|XP_972453.1| PREDICTED: similar to CG6601-PA [Tr... 51 1e-04 gi|158297778|ref|XP_001238010.2| AGAP011363-PA [Anopheles gambia... 51 1e-04 gi|15242483|ref|NP_199387.1| AtRABA1c (Arabidopsis Rab GTPase ho... 51 1e-04 gi|123468458|ref|XP_001317447.1| Ras family protein [Trichomonas... 51 1e-04 gi|6320869|ref|NP_010948.1| GTPase of the Ypt/Rab family, very s... 51 1e-04 gi|51480434|gb|AAH80215.1| Rab6b protein [Danio rerio] 51 1e-04 gi|123495369|ref|XP_001326722.1| Ras family protein [Trichomonas... 51 1e-04 gi|50742500|ref|XP_419654.1| PREDICTED: similar to low Mr GTP-bi... 51 1e-04 gi|108706607|gb|ABF94402.1| Ras-related protein Rab-6A, putative... 51 1e-04 gi|72384491|gb|AAZ67607.1| 80A08_22 [Brassica rapa subsp. pekine... 51 1e-04 gi|157112172|ref|XP_001657423.1| rab6 [Aedes aegypti] >gnl|BL_OR... 51 1e-04 gi|118375516|ref|XP_001020942.1| Ras family protein [Tetrahymena... 51 1e-04 gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichod... 51 1e-04 gi|147788245|emb|CAN75965.1| hypothetical protein [Vitis vinifera] 51 1e-04 gi|17137220|ref|NP_477172.1| Rab-protein 6 CG6601-PA [Drosophila... 51 1e-04 gi|122131882|sp|Q06AU5|RAB32_PIG Ras-related protein Rab-32 >gnl... 51 1e-04 gi|145607295|ref|XP_361669.2| RAS small monomeric GTPase Rab6 [M... 51 1e-04 gi|157338312|emb|CAO39356.1| unnamed protein product [Vitis vini... 51 1e-04 gi|48096836|ref|XP_392533.1| PREDICTED: similar to Rab-protein 6... 51 1e-04 gi|145514760|ref|XP_001443285.1| hypothetical protein GSPATT0001... 51 1e-04 gi|114052691|ref|NP_001040270.1| ras small monomeric GTPase Rab6... 51 1e-04 gi|149744199|ref|XP_001496437.1| PREDICTED: similar to RAB32 [Eq... 51 1e-04 gi|156396428|ref|XP_001637395.1| predicted protein [Nematostella... 51 1e-04 gi|58493576|gb|AAW78556.1| RabB [Entamoeba dispar] 51 1e-04 gi|6323642|ref|NP_013713.1| GTPase; GTP-binding protein of the r... 50 2e-04 gi|147834571|emb|CAN69655.1| hypothetical protein [Vitis vinifer... 50 2e-04 gi|160704321|gb|EAT78701.2| hypothetical protein SNOG_14076 [Pha... 50 2e-04 gi|91089681|ref|XP_974614.1| PREDICTED: similar to CG6601-PA [Tr... 50 2e-04 gi|114559803|ref|XP_522433.2| PREDICTED: similar to RAB13 protei... 50 2e-04 gi|71033513|ref|XP_766398.1| hypothetical protein TP01_0877 [The... 50 2e-04 gi|158595378|gb|EDP33937.1| RAS-related protein F43D9.2, putativ... 50 2e-04 gi|73987984|ref|XP_850271.1| PREDICTED: similar to RAB6A, member... 50 2e-04 gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza ... 50 2e-04 gi|115478587|ref|NP_001062887.1| Os09g0327100 [Oryza sativa (jap... 50 2e-04 gi|21465930|pdb|1KY2|A Chain A, Gppnhp-Bound Ypt7p At 1.6 A Reso... 50 2e-04 gi|3024504|sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B >gnl... 50 2e-04 gi|126307642|ref|XP_001367187.1| PREDICTED: similar to RAB25, me... 50 2e-04 gi|72013796|ref|XP_786497.1| PREDICTED: similar to small GTP-bin... 50 2e-04 gi|123976003|ref|XP_001314415.1| small GTP-binding protein, puta... 50 2e-04 gi|84998352|ref|XP_953897.1| Rab GTPAse [Theileria annulata stra... 50 2e-04 gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10... 50 2e-04 gi|146097933|ref|XP_001468265.1| ras-related protein; small GTP-... 50 2e-04 gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus] 50 2e-04 gi|15236099|ref|NP_195709.1| ATGB3 (GTP-BINDING PROTEIN 3); GTP ... 50 2e-04 gi|114051368|ref|NP_001040368.1| Rab7 [Bombyx mori] >gnl|BL_ORD_... 50 2e-04 gi|146419893|ref|XP_001485906.1| hypothetical protein PGUG_01577... 50 2e-04 gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus N... 50 2e-04 gi|68466093|ref|XP_722821.1| putative ARF-like GTPase [Candida a... 50 2e-04 gi|145486921|ref|XP_001429466.1| hypothetical protein GSPATT0003... 50 2e-04 >gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light intermediate chain isoform 1 [Pan troglodytes] Length = 351 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 213/359 (59%), Positives = 266/359 (74%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT+D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K++KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 292 VYEKLFPPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 2 [Canis familiaris] Length = 348 Score = 526 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 215/359 (59%), Positives = 266/359 (74%), Gaps = 14/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R S D E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGSEGDGLE--------IGEKSVFFIGSKNGGKTTIILRCL 49 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHN PKDIAH WELGGG SL DL+ IPIT+DN+ S+V Sbjct: 50 DRDEPPKPTLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTFSIV 109 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+K+ L KT +Q++ + KD+PDRE Sbjct: 110 LVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRE 169 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 L+ PF +PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 170 LVDPFLIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKVR 228 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DSLSQIG P + DIG LHA +P DLWKK Sbjct: 229 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKK 288 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+E+VFP +ST K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 289 VYERVFPPKSTNTLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWKQIELD 347 >gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|20988526|gb|AAH30450.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|24659541|gb|AAH39070.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 351 Score = 526 bits (1356), Expect = e-148, Method: Composition-based stats. Identities = 212/359 (59%), Positives = 266/359 (74%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R S E + E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRRSHGSEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE+AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDESAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS--GKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT S +QR+ V+ KD+PDRE Sbjct: 113 LVLDLSKPNDLWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 173 LIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V++K+FP +ST K ++DP +DPQ++E +D +R QKDQEL+ YKR +K+WK + LD Sbjct: 292 VYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWKQIELD 350 >gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein [Equus caballus] Length = 351 Score = 525 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 213/359 (59%), Positives = 268/359 (74%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP SDTLW+IA AEV R S E + E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SDTLWEIAKAEVEKRGSNGSESDGVE-----IGEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GR+A+GHN PKDIAH WELGGG SL DL+ IPIT+D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRKAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS--GKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V KV L K S +Q++ + KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVNKVIMKLGKKNSKASSEMRQKIWSNMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 +I PFP+PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 173 IIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DSLSQIG P + DIG LHA++P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+E++FP ++T K++KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 292 VYERLFPPKNTNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain isoform 1 variant [Homo sapiens] Length = 351 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 211/359 (58%), Positives = 263/359 (73%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD E Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKLR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 292 VYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 350 >gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] gi|81673547|gb|AAI09911.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] Length = 351 Score = 523 bits (1348), Expect = e-147, Method: Composition-based stats. Identities = 214/359 (59%), Positives = 266/359 (74%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R S +E + E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGSSENEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRR +GHN PKDIAH WELGGG SL DL+ IPIT+D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + + ++KV L K +Q++ + KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 L+ PFP+PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 173 LLDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG + KSI D +KPL I AG DSLSQIGPP + DIG LHA++P DLWKK Sbjct: 232 GVINQLAFGINKSKSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDLWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K++KDP KDPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 292 VYEKLFPPKSINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain isoform 1 [Homo sapiens] gi|19908231|gb|AAL99216.1| dynein 2 light intermediate chain [Homo sapiens] gi|119620696|gb|EAX00291.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_c [Homo sapiens] Length = 351 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 211/359 (58%), Positives = 262/359 (72%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD E Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 292 VYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 350 >gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Danio rerio] gi|32766386|gb|AAH55198.1| Zgc:63673 [Danio rerio] Length = 358 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 358/358 (100%), Positives = 358/358 (100%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL Sbjct: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV Sbjct: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI Sbjct: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF Sbjct: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF Sbjct: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 Query: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP Sbjct: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 >gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|62822153|gb|AAY14702.1| unknown [Homo sapiens] gi|119620694|gb|EAX00289.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 352 Score = 517 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 211/360 (58%), Positives = 262/360 (72%), Gaps = 12/360 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYP-DR 177 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+P D Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPQDH 172 Query: 178 ELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKS 237 ELI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K Sbjct: 173 ELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKI 231 Query: 238 RSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 R INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWK Sbjct: 232 RGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWK 291 Query: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 KV+EK+FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 292 KVYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 351 >gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] Length = 350 Score = 516 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 210/359 (58%), Positives = 261/359 (72%), Gaps = 12/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ +D+PD E Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIW-NYAEDHPDHE 171 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 172 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIR 230 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 231 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 290 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 291 VYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 349 >gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 387 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 212/354 (59%), Positives = 266/354 (75%), Gaps = 8/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 SDTLW+IA AEV RE + + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 39 SDTLWEIAKAEVEKREISENGGDGAE-----VCEKSVFFIGSKNGGKTTIILRCLDRDEP 93 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT +++ S+VLVLDL Sbjct: 94 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITNESLRTFSLVLVLDL 153 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPF 183 SKPN LW TMESLL + V+K+ L KT +Q++ + KD+PDRELI PF Sbjct: 154 SKPNDLWPTMESLLQVTKAHVDKLIMKLGKTSTKAASEMRQKMWSNMQKDHPDRELIDPF 213 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P+PL+I+GSK+DIFQDFDSEKRK+ICKTLRF++H+YGASL+F +SKSE + K R INQ Sbjct: 214 PIPLVIIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMF-ASKSEALLLKIRGVINQ 272 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSIS D +KPL IPAG DSLSQIG P +E +IG LHA+ P +LWKKV+EKV Sbjct: 273 LAFGIDKSKSISVDQNKPLFIPAGLDSLSQIGSPPLSENEIGKLHAQTPMELWKKVYEKV 332 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +S KE +DP +DPQ++E +D +RAQKDQEL+QYK+ +KSWK + D Sbjct: 333 FPPKSANTSKETRDPARDPQYAESEVDEMRAQKDQELEQYKKNTSKSWKQIEFD 386 >gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 light intermediate chain [Gallus gallus] Length = 637 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 204/360 (56%), Positives = 263/360 (73%), Gaps = 9/360 (2%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPK + DTLWDIA EV RE+ D+ + E +++V FMGSK GGKTTI+LR L Sbjct: 284 MPK-AGDTLWDIARDEVEKRENNGDDGKRVE-----VCEKSVLFMGSKNGGKTTIILRCL 337 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 ER+E KPTL LEYTFGRRAR HN PKDIAH WE+GGG SL +L++IPIT +N+ +VV Sbjct: 338 EREEVPKPTLVLEYTFGRRARRHNAPKDIAHFWEIGGGTSLLELIRIPITVNNIRSFAVV 397 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES--RSGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + RN V K+ A L+KT KQ++ L +D+PD + Sbjct: 398 LVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKTDPEVAAEIKQKMQNNLQRDHPDYD 457 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 L+ PFP+PL+I+GSK+DIF +FDSE RK+I +TLRF++H+YGASL+FT SKSE + K+R Sbjct: 458 LVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRFVSHYYGASLVFT-SKSEALLLKAR 516 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 + IN LAFG +R KS+S D SKPL IPAG DSLSQIGPP ++ +IG + A P +LWKK Sbjct: 517 ALINHLAFGYDRSKSVSVDHSKPLFIPAGLDSLSQIGPPPTSDSNIGKMRANTPLELWKK 576 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 VFEK FP S + ++ KDP + Q++E +D +RAQK+QE +QYKR +KSWK + DP Sbjct: 577 VFEKTFPPRSFSDLQDSKDPAQVSQYAEYEVDVMRAQKNQEFEQYKRNASKSWKEMDFDP 636 >gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 [Macaca mulatta] Length = 365 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 199/359 (55%), Positives = 254/359 (70%), Gaps = 8/359 (2%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 +P+ +TLW+IA AEV R E + E +++VFF+GSK GGKTTI+LR L Sbjct: 12 VPQKIIETLWEIAKAEVEKRGINGSEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCL 66 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RD K L L ++F G +TPKDIAH WELGGG SL DL+ +PIT+D + S+V Sbjct: 67 DRDRPPKMVLFLFFSFSFCHPGWSTPKDIAHFWELGGGTSLLDLISVPITSDTLRTFSLV 126 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+K+ L KT +Q++ + KD+PDRE Sbjct: 127 LVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNPKAASEMRQKIWNNMQKDHPDRE 186 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+DIFQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 187 LIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIR 245 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS SQIG P E DIG LHA +P +LWKK Sbjct: 246 GVINQLAFGIDKSKSICVDQNKPLLITAGLDSFSQIGSPPVPENDIGKLHAHSPMELWKK 305 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 306 VYEKLFPPKSINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 364 >gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermediate chain isoform 2 [Pan troglodytes] Length = 334 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 202/342 (59%), Positives = 252/342 (73%), Gaps = 11/342 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT+D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQEL 340 V+EK+FP +S K++KDP +DPQ++E +D +R QKDQ L Sbjct: 292 VYEKLFPPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQVL 333 >gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chain isoform 3 [Homo sapiens] Length = 334 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 199/339 (58%), Positives = 247/339 (72%), Gaps = 11/339 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD E Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKD 337 V+EK+FP +S K++KDP +DPQ++E +D +R QKD Sbjct: 292 VYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKD 330 >gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] Length = 341 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 196/335 (58%), Positives = 248/335 (74%), Gaps = 11/335 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV+ R S E + E ++++FF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVQKRRSHGSEGDGAE-----IGEKSLFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE+AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDESAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS--GKQRVPRVLHKDYPDRE 178 LVLDLSKPN W TME+LL + ++ V+KV L KT S +QR+ V+ KD+PDRE Sbjct: 113 LVLDLSKPNDHWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 173 LIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIR 333 V++K+FP +ST K ++DP +DPQ++E +D +R Sbjct: 292 VYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMR 326 >gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] Length = 318 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 187/319 (58%), Positives = 234/319 (73%), Gaps = 8/319 (2%) Query: 21 ESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRA 80 E + E ++++VFF+GSK GGKTTI+LR L+RDE KPTLALEYT+GRRA Sbjct: 2 GINGSEGDGAEF-----AEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRA 56 Query: 81 RGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLG 140 +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDLSKPN LW TME+LL Sbjct: 57 KGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQ 116 Query: 141 SARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQ 198 + ++ V+KV L KT +Q++ + KD+PD ELI PFPVPL+I+GSK+D+FQ Sbjct: 117 ATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQ 176 Query: 199 DFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 DF+SEKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQLAFG ++ KSI D Sbjct: 177 DFESEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKLRGVINQLAFGIDKSKSICVDQ 235 Query: 259 SKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDP 318 +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK+FP +S K++KDP Sbjct: 236 NKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDP 295 Query: 319 VKDPQFSEPLIDSIRAQKD 337 +DPQ++E +D +R QKD Sbjct: 296 ARDPQYAENEVDEMRIQKD 314 >gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibenclamide-sensitive voltage-gated potassium channel, partial [Ornithorhynchus anatinus] Length = 449 Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 185/343 (53%), Positives = 244/343 (71%), Gaps = 16/343 (4%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +TLW+IA AEV +E +E +++VFF+GSK GGKTTI+LR L+RDE A Sbjct: 1 ETLWEIARAEVEKKEKPGGGDEG---------EKSVFFVGSKNGGKTTIILRCLDRDEPA 51 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 +PTLALEYTFGRRARGHNTPKDIAH WELGGG SL DL +IPITAD++ + + LDLS Sbjct: 52 RPTLALEYTFGRRARGHNTPKDIAHFWELGGGTSLLDLARIPITADSLRTFATDIFLDLS 111 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVP 186 +P+ LW T E LL + R VE L + G + R + +D+PDRE I PFP+P Sbjct: 112 RPSELWLTAEHLLRAVRTHVEN----LGQPGTRAAATPRTWSPVPEDHPDREFIDPFPIP 167 Query: 187 LLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 L+I+GSK+D+FQ+ DSEKRKVIC+TLRFLAH +GA+L+FT KSE + K+RS I+ LAF Sbjct: 168 LVIIGSKYDVFQNLDSEKRKVICRTLRFLAHHHGATLMFTG-KSEALLLKTRSVISHLAF 226 Query: 247 --GTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVF 304 G +R K+++ D +KPL IPAG DS SQIGPP + DIG L + P +LWK+V+ K F Sbjct: 227 GVGVDRSKALTLDQNKPLFIPAGLDSFSQIGPPPSAAGDIGKLRVQTPLELWKEVYNKAF 286 Query: 305 PHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 P ++ +RK+LKDP +DPQ++E +D++RAQKDQ + +R Q Sbjct: 287 PLQTKSDRKDLKDPGRDPQYAEREVDAMRAQKDQRKKRRERGQ 329 >gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella vectensis] gi|156226126|gb|EDO46938.1| predicted protein [Nematostella vectensis] Length = 366 Score = 439 bits (1131), Expect = e-121, Method: Composition-based stats. Identities = 161/357 (45%), Positives = 227/357 (63%), Gaps = 3/357 (0%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 K S T+WD+A E + ++ +E H + +F +GSK GKT+++LRFL+R Sbjct: 4 KRSDKTIWDLAIEERDYLLNEAKKKGTQESSPHG-EEAGIFLIGSKNAGKTSMVLRFLDR 62 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 DE KPT AL+YTFGR+A+GHN KD+ H+WELGGG LS L+ IPI D+V LS+++ Sbjct: 63 DEVPKPTTALDYTFGRKAKGHNIAKDVGHIWELGGGTFLSKLIDIPINVDSVRGLSIIIF 122 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQR--VPRVLHKDYPDRELI 180 LDLS PN LW TME+LL + +V KV L S K R D+PD+ + Sbjct: 123 LDLSLPNELWHTMETLLNQVKKRVHKVMDELAAKNPSAVQKLRNDAWEKFGTDHPDKSFV 182 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 PFP+PL IVG K+DI+QDFD EKRK+I + LRF+AH GA L F S+K+E + +SR Sbjct: 183 EPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGRSRGM 242 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 I L F T K+I D +KP+ + AG DSL+QIG P D+G L ++NP+DLWK + Sbjct: 243 IGHLLFHTSLGKAIGVDHNKPIIVSAGQDSLAQIGAPPVASEDLGRLQSRNPYDLWKAAY 302 Query: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP E +++ + +DP KDPQ+ E +D++R QKD+ELD+Y+R+ + + ++ D Sbjct: 303 ATFFPPEKSKQHSDREDPSKDPQYFEAAVDAMRKQKDEELDRYRRQAERKAREMSRD 359 >gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115941395|ref|XP_001177851.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 363 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 161/350 (46%), Positives = 243/350 (69%), Gaps = 7/350 (2%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 ++WDIA E + + +E+ E S+ + F+GSK GKT+I+LRFLE++E Sbjct: 7 KSIWDIAILEAEQKHATESKEQGGEAKG---SENHILFIGSKNAGKTSIILRFLEKEEAP 63 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 KPT+ALEYTFGRRA+GHN KDI H+WELGGG LS L +IP++ D + S+++V+DLS Sbjct: 64 KPTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDLS 123 Query: 127 KPNALWETMESLLGSARNQVEKVCAAL--QKTGESRSGKQRVPRVLHKDYPDRELISPFP 184 +P LW TME+L+ A + VE+V + K+R + + D+PDR+++ PFP Sbjct: 124 QPYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHPDRDMLDPFP 183 Query: 185 VPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQL 244 +PL+IVG+K+D++QDFD EKRKVI KTLRF+AH YGA+L F+S+K++ MS++++ ++ L Sbjct: 184 LPLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTKNLVSHL 243 Query: 245 AFGTERP-KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 AFGT K+IS DP+KP+++P G DSL QIG P + D+G +A+ P DLWK+ F Sbjct: 244 AFGTTLSLKTISIDPNKPISVPFGLDSLEQIGLPPVADDDLGRSNARTPLDLWKQAFTSY 303 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKS 353 FP +ST + ++DP KDPQ++E +D++R QK++EL++Y+++ + K Sbjct: 304 FPQKSTIK-AIVEDPSKDPQYAEAAVDNMREQKNKELERYRKQAERRAKE 352 >gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 213/364 (58%), Positives = 257/364 (70%), Gaps = 13/364 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPK+SSDTLWD+AAAEV SRES D E + +RTVF MGSKAGGKT+ILL+ L Sbjct: 1 MPKISSDTLWDLAAAEVNSRESEDDYGER-----NVAVERTVFLMGSKAGGKTSILLKCL 55 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE +KPTLALEYTFGRRARGHNTPKDIAH+WELGGG LSDLVQIPIT+ ++ FLSV+ Sbjct: 56 DRDEPSKPTLALEYTFGRRARGHNTPKDIAHIWELGGGTFLSDLVQIPITSADLKFLSVI 115 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS------GKQRVPRVLHKDY 174 L++DLSKPN LW T E LL + +EK + QK ++ Q RVL DY Sbjct: 116 LIVDLSKPNELWGTTEKLLQVTQAHLEKAFSMAQKAQTAKPAATHQTATQSAARVLPADY 175 Query: 175 PDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIF-TSSKSETT 233 PDRELIS FPVPLLIVGSK+DIFQ+FDS+K+K+I + LRF+AH Y ASLI Sbjct: 176 PDRELISAFPVPLLIVGSKYDIFQEFDSDKKKLIAQMLRFVAHSYAASLIVIHQXXXXXX 235 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 K++S D +KPL IPAGSDS SQIG P A +VDI +LHA+NP Sbjct: 236 XXXXXXXXXXXXXXXXXXKTVSMDLTKPLIIPAGSDSFSQIGSPCAADVDIASLHARNPK 295 Query: 294 DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKS 353 DLW+KV VFP E +++LKDP KDPQ+SEP ID++RAQKDQEL+QYKR AK+W+ Sbjct: 296 DLWRKVCGCVFPPEK-EHQQDLKDPAKDPQYSEPQIDAMRAQKDQELEQYKRNAAKTWQG 354 Query: 354 LALD 357 L L+ Sbjct: 355 LDLE 358 >gi|157119433|ref|XP_001653379.1| conserved hypothetical protein [Aedes aegypti] gi|108883162|gb|EAT47387.1| conserved hypothetical protein [Aedes aegypti] Length = 347 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 118/355 (33%), Positives = 193/355 (54%), Gaps = 25/355 (7%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 M +++T+ DIA V T+ + E P++RT+F +GSK GK+T++ RFL Sbjct: 10 MEPDTTETIQDIAMKLV------TEHMKQESSLTGGPTERTIFVLGSKGAGKSTLINRFL 63 Query: 61 ERDETAKPTLALEYTFGRR-ARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 +RD+ +PTLALEY+FGRR A G K+I ++WELG ++ + L+++P+ + ++ + Sbjct: 64 DRDDITRPTLALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAAFAA 123 Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 V+VLDLS+P+ LW ++ +L + + K C+ E ++R+ + + D+ D Sbjct: 124 VIVLDLSQPDRLWTDLQCILNGLKQAISKNCSP----KEVSEMQERMKQKVGLDHEDLNT 179 Query: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 + P P++IVG K+D FQ+ DSE +K +C+ LR ++H GA+LIF +SK+ + R Sbjct: 180 LEILPFPVIIVGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRD 239 Query: 240 FINQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 +N L FG+ K+ + D + P+ +P G DS +IG IG Sbjct: 240 AMNHLGFGSPSNPFKATALDHNGPIVVPFGGDSWEKIGVTPTNSERIGMS---------- 289 Query: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 + P T + DP KD F E +ID +RAQKD EL + ++ K Sbjct: 290 --YSAQIPQVGTEKVSIPDDPAKDGGFKERVIDELRAQKDDELMRLLKDTEMRMK 342 >gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae str. PEST] gi|116118470|gb|EAA13896.3| AGAP010165-PA [Anopheles gambiae str. PEST] Length = 339 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 125/356 (35%), Positives = 193/356 (54%), Gaps = 26/356 (7%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 M +++T+ DIA V + A P++RT+F +GSK GK+T++ RFL Sbjct: 1 MEVDTTETIQDIAIKLVTEQLRNESRL------ATTPTERTLFVLGSKGVGKSTLINRFL 54 Query: 61 ERDETAKPTLALEYTFGRR-ARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 +RD+ +PTLALEY+FGR+ A G K+I ++WELG + S L+++PI + + S Sbjct: 55 DRDDVPRPTLALEYSFGRKTASGQGAQKNICNVWELGSLANSSQLIEMPIRSHGLQTFSC 114 Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 +++LDLS+P+ LW +ES+L + K A G+ K+ + + K++PD Sbjct: 115 IVMLDLSQPDRLWTDLESVLNGLKQATAKHAVA----GQIEEMKELTAQRIGKEHPDLST 170 Query: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 + FP P++IVG K+DI+Q+ DSE RK +C+ LR +AH GA+L++ S+K+ + R Sbjct: 171 LELFPFPIVIVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRD 230 Query: 240 FINQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 +N L FG+ ++ S D S PLAIP G+DS ++IG + IG Sbjct: 231 TMNHLGFGSPSNPFRAASFDHSSPLAIPFGADSWARIGVTPSNSERIGLS---------- 280 Query: 298 KVFEKVFPHESTRERKEL-KDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 F P L DP KD F E ID +R+QKD+EL ++ K Sbjct: 281 --FSTQIPQLPIGNGGILPDDPAKDAGFKEASIDELRSQKDEELMYVLKDTEIRMK 334 >gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chain [Rattus norvegicus] gi|50927372|gb|AAH79201.1| Dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 311 Score = 365 bits (938), Expect = 3e-99, Method: Composition-based stats. Identities = 153/252 (60%), Positives = 188/252 (74%), Gaps = 11/252 (4%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R + + E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRRCHGSDGDGME-----IGEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS--GKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L K S +QR+ V+ KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVTMKLGKANSKASSEMRQRMWSVMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FT SKSE + K R Sbjct: 173 LIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKMR 231 Query: 239 SFINQLAFGTER 250 INQLAFG ++ Sbjct: 232 GVINQLAFGIDK 243 >gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated family member (xbx-1) [Caenorhabditis elegans] gi|77799271|emb|CAB01645.2| Hypothetical protein F02D8.3 [Caenorhabditis elegans] Length = 370 Score = 362 bits (930), Expect = 2e-98, Method: Composition-based stats. Identities = 123/354 (34%), Positives = 206/354 (58%), Gaps = 21/354 (5%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHF------------PSQRTVFFMGSKAGGKTTIL 56 +WD+A ++ + R E + + +D + + + F G++ GK++ + Sbjct: 3 IWDLAKQKLVENKQRAAELKQKLDDENGTQSDNYLSEVRRRHESHIIFAGNRKSGKSSFM 62 Query: 57 LRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSF 116 L FLER E K ++ LEYT+ RR RG+ KDIA+LWELGGG ++++L+ +PIT NV Sbjct: 63 LNFLERKEDLKDSVGLEYTYARRTRGN--VKDIANLWELGGGATVTELLSVPITMKNVEI 120 Query: 117 LSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD 176 S++L+LD++ + +W T+E + S R VE + ++R ++ R+ D Sbjct: 121 CSLILLLDMTNLDEMWITIEKTVDSVRRLVENL-ERQDINLQTRLAEKMRLRLEKYDDGS 179 Query: 177 RELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSK 236 ++ +P P+P+ IV SK+D FQ+F+SEKR+ +C+ LRFLA+ YGA+L+ SS+ E Sbjct: 180 LKMCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPKL 239 Query: 237 SRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLW 296 ++ + AFGT P+ TD +KP+ + G DSL IG P A++ +G A +PF+LW Sbjct: 240 VKNMTSHFAFGTVCPQGYMTDHNKPMFVKCGFDSLESIGIPPASDNFMG---ASSPFNLW 296 Query: 297 KKVFEKVFPHESTR---ERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 ++ F ++P ++ E + +DP+ DP F EP ID++ K +EL + R + Sbjct: 297 RESFISLWPQKTGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKELKNHIRSK 350 >gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] gi|39583371|emb|CAE66345.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] Length = 366 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 113/350 (32%), Positives = 196/350 (56%), Gaps = 17/350 (4%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSK--------AGGKTTILLRFL 60 +WD+A ++ + R E E + +D + + AG + I+ Sbjct: 3 IWDLAKQKLVENKQRAAELEQKLDDENGAVNDNYLAEVRRRHESHIIIAGNRQIIIHVEF 62 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 E + LE+T+ RR RG+ KD+A+LWELGGG S+++L+ +PITA NV S++ Sbjct: 63 SGAERRFERIGLEFTYARRTRGN--VKDVANLWELGGGSSVTELLSVPITAKNVETCSLI 120 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 ++LD++ + +W T+E + + R VE + ++R ++ R+ + ++ Sbjct: 121 VLLDMTNLSEMWITIEKTVDTVRRLVENL-ERQDANLQTRMAEKSRLRLEKYESSSLKMC 179 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 +P P+P+ IV +K+D FQ+F+SEKR+ +C+ LRFLA+ YGA+L+ SS+ E ++ Sbjct: 180 APCPLPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPKLVKNM 239 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 I+ AFGT P+ TD +KP+ I G D+L IG P ++ +G A +PF+LW++ F Sbjct: 240 ISHFAFGTVCPQGYITDHNKPMFIKCGFDNLEAIGIPPGSDNFMG---ASSPFNLWRESF 296 Query: 301 EKVFPHESTR---ERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 ++P ++ E + +DP+ DP F EP ID++ K +EL+ + R + Sbjct: 297 ISLWPQKTGNVDVEDTKKQDPMIDPVFKEPSIDNLVEIKRKELENHIRSK 346 >gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70877049|gb|EAN90434.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 422 Score = 355 bits (913), Expect = 2e-96, Method: Composition-based stats. Identities = 109/380 (28%), Positives = 183/380 (48%), Gaps = 41/380 (10%) Query: 1 MPKVSSDTLWDIAAAEV-RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRF 59 MP+V+ D D+ + +RE++ + E V +G+ GGKT++L R Sbjct: 50 MPQVTVDPTKDLWQNIILNTRENQVTQTEV-----------NVLIVGTSGGGKTSLLRRI 98 Query: 60 LERDETA-----------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIP 108 T+ KPT AL+Y+F RR H +AH WEL G+ LS L ++ Sbjct: 99 FSGVNTSSSSVPKSFLRVKPTTALDYSFVRRNDRHIA--QVAHFWELAQGMELSQLCEVV 156 Query: 109 ITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRV 166 IT +NV + + +V+D S+P+ +W+T+ + +V ++ ++ G + K R Sbjct: 157 ITPENVHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRA 216 Query: 167 PRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFT 226 R++ ++PD + VP +I+ +K D F + K + +++RF+AH YGA L+FT Sbjct: 217 KRLVGMEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFT 275 Query: 227 SSKSETTMSKSRSFINQLAF-GTERPKSISTDPSK-PLAIPAGSDSLSQIGPPVATEVDI 284 S K R+ +N L F T K I DP + + + +D+ + IG P +++ Sbjct: 276 SDAE---AIKLRAVMNHLVFVSTFDLKHIELDPERGAVLVIPSADTFADIGEPAVSDMGG 332 Query: 285 GTLHAKNPFDLWKKVFEKVFPHESTRER-------KELKDPVKDPQFSEPLIDSIRAQKD 337 D WK + +FP + + R K L D + F EP +D++R QK+ Sbjct: 333 LQSTGDAELDRWKAPLDAMFPAKQSEGRMQNDSFLKRLYD-TGENGFGEPTVDAVRKQKE 391 Query: 338 QELDQYKREQAKSWKSLALD 357 EL+QY++ K KS D Sbjct: 392 DELEQYRKSAFKREKSTKDD 411 >gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melanogaster] gi|22946025|gb|AAF52775.2| CG3769-PA [Drosophila melanogaster] gi|66770889|gb|AAY54756.1| IP11319p [Drosophila melanogaster] Length = 368 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 185/349 (53%), Gaps = 27/349 (7%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 ++ ++ DIA R + + + E P +RT+ +GSK GKTT + +F +R+E Sbjct: 28 ATPSIQDIA-----GRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 Query: 65 T-AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVL 123 +PTLALEY+FGRR +P+ + ++WELG + L+++P+ + L+V+L+L Sbjct: 83 HATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 Query: 124 DLSKPNALWETMESLLGSAR----NQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 DLS+P W +E R +EKV L++ E R+ V RV ++ D E Sbjct: 142 DLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRT----VERVGQQN-KDSEK 196 Query: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 + P P P++IVG K+D+F FD RK C+ LR +AH G +L+F S K R Sbjct: 197 LDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRD 256 Query: 240 FINQLAFGTE--RPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 I L FG+ +S D ++PL I G+DS S+IG A V+ + A ++ + Sbjct: 257 TICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQ 314 Query: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 EK ++ KE DP KDP F E +ID IR+QK++EL R+ Sbjct: 315 LQLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRD 356 >gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_a [Mus musculus] Length = 527 Score = 344 bits (884), Expect = 4e-93, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 121/336 (36%), Gaps = 48/336 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 68 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 115 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 116 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMS 175 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 176 RPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSPQRRGP 235 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 236 LTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQAHLRR 295 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 296 FCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWDNEKKI 355 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 356 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 388 >gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin light chain A [Monodelphis domestica] Length = 520 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 76/341 (22%), Positives = 128/341 (37%), Gaps = 48/341 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V +G GKT+++ R Sbjct: 36 EEDDGQNLWSCILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGRIQG 84 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 R E K EY + + ++W L G + L++ + A+++ V+L Sbjct: 85 RPEECKKGRGAEYLYLSVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMEANSLRDTLVIL 144 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGK 163 V+D+SKP ++++ R ++K+ ++ E + Sbjct: 145 VVDMSKPWTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASP 204 Query: 164 QRVPRVLHKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 QR L +D D L VP+L+V +K D D+ E I Sbjct: 205 QRR-STLQEDKDDSVMLPLGADTLTYNLGVPVLVVCTKCDAISVLEKEHDYKDEHFDFIQ 263 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K + +I Q +G + IPAG D Sbjct: 264 SHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFKIPAVVVEKDAVFIPAGWD 323 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + +IG + TL A++ F D+ K + F HE Sbjct: 324 NDKKIG---ILHENFQTLKAEDSFEDIITKPPVRKFVHEKE 361 >gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 342 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 125/334 (37%), Gaps = 48/334 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+++ R + E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPTGKNVLLLGEDGAGKTSLIRRI-QGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R V+K+ ++ E + QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRRATAA 215 Query: 171 HKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L +P+L+V +K D D+ E I +R Sbjct: 216 QEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 276 LQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG- 334 Query: 277 PVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL ++ F D+ K + F HE Sbjct: 335 --ILHENFQTLKIEDNFEDIITKPPVRKFVHEKE 366 >gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|73919260|sp|Q8R1Q8|DC1L1_MOUSE Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|19484061|gb|AAH23347.1| Dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|74198263|dbj|BAE35301.1| unnamed protein product [Mus musculus] gi|148677352|gb|EDL09299.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] Length = 523 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 125/334 (37%), Gaps = 48/334 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+++ R + E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPTGKNVLLLGEDGAGKTSLIRRI-QGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R V+K+ ++ E + QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRRTTGA 215 Query: 171 HKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L +P+L+V +K D D+ E I +R Sbjct: 216 QEDRGDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 276 LQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG- 334 Query: 277 PVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL ++ F D+ K + F HE Sbjct: 335 --ILHENFQTLKVEDNFEDIITKPPVRKFVHEKE 366 >gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A isoform 2 [Pan troglodytes] gi|134047749|sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|119584837|gb|EAW64433.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_c [Homo sapiens] gi|124297735|gb|AAI31621.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] Length = 523 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 127/334 (38%), Gaps = 48/334 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+++ R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R V+K+ ++ + + QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 215 Query: 171 HKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L +P+L+V +K D D+ E I +R Sbjct: 216 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 276 LQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG- 334 Query: 277 PVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL A++ F D+ K + F HE Sbjct: 335 --ILHENFQTLKAEDNFEDIITKPPVRKFVHEKE 366 >gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] Length = 358 Score = 341 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 116/325 (35%), Positives = 175/325 (53%), Gaps = 22/325 (6%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET-AKPTLALEYTFGRRARGHNTPK 87 + E P +RT+ +GSK GKTT + +F +R+E +PTLALEY+FGRR +P+ Sbjct: 37 RQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ 96 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSAR---- 143 + ++WELG + L+++P+ + L+V+L+LDLS+P W +E R Sbjct: 97 -VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 155 Query: 144 NQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSE 203 +EKV L++ E R+ V RV ++ D E + P P P++IVG K+D+F FD Sbjct: 156 QMMEKVTPELREILEQRT----VERVGQQN-KDSEKLDPLPFPVIIVGGKYDVFSGFDPI 210 Query: 204 KRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTE--RPKSISTDPSKP 261 RK C+ LR +AH G +L+F S K R I L FG+ +S D ++P Sbjct: 211 IRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP 270 Query: 262 LAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKD 321 L I G+DS S+IG A V+ + A ++ + EK ++ KE DP KD Sbjct: 271 LCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQLQLEK-------QKLKETTDPAKD 321 Query: 322 PQFSEPLIDSIRAQKDQELDQYKRE 346 P F E +ID IR+QK++EL R+ Sbjct: 322 PGFKELVIDEIRSQKNEELAGLMRD 346 >gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light chain-A [Canis familiaris] Length = 524 Score = 341 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 127/334 (38%), Gaps = 48/334 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+++ R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAISLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R ++K+ ++ E + QR Sbjct: 156 WTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRRNTGS 215 Query: 171 HKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L +P+L+V +K D D+ E I +R Sbjct: 216 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 276 LQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG- 334 Query: 277 PVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL A++ F D+ K + F HE Sbjct: 335 --ILHENFQTLKAEDNFEDIITKPPVRKFVHEKE 366 >gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] gi|73919263|sp|Q6PDL0|DC1L2_MOUSE Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|35193080|gb|AAH58645.1| Dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] Length = 492 Score = 340 bits (874), Expect = 6e-92, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 121/336 (36%), Gaps = 48/336 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 201 LTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQAHLRR 260 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 261 FCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWDNEKKI 320 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 321 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKK 353 >gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 340 bits (874), Expect = 7e-92, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 127/334 (38%), Gaps = 48/334 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+++ R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R V+K+ ++ + + QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 215 Query: 171 HKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L +P+L+V +K D D+ E I +R Sbjct: 216 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 276 LRYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG- 334 Query: 277 PVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL A++ F D+ K + F HE Sbjct: 335 --ILHENFQTLKAEDNFEDIITKPPVRKFVHEKE 366 >gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculus] gi|74183685|dbj|BAE24463.1| unnamed protein product [Mus musculus] gi|74190862|dbj|BAE28215.1| unnamed protein product [Mus musculus] gi|74212500|dbj|BAE30992.1| unnamed protein product [Mus musculus] Length = 492 Score = 340 bits (873), Expect = 8e-92, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 121/336 (36%), Gaps = 48/336 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 201 LTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQAHLRR 260 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 261 FCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWDNEKKI 320 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 321 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 353 >gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Rattus norvegicus] gi|2494218|sp|Q62698|DC1L2_RAT Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|619665|gb|AAA80334.1| LIC-2 gi|149032345|gb|EDL87236.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_b [Rattus norvegicus] Length = 497 Score = 340 bits (872), Expect = 1e-91, Method: Composition-based stats. Identities = 73/357 (20%), Positives = 128/357 (35%), Gaps = 56/357 (15%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 201 LTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQAHLRG 260 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 261 FCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWDNEKKI 320 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST--RER------KELKDPVKDP 322 + T+ ++ + D K + H+ E K+ + P + P Sbjct: 321 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQQESPARGP 374 >gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein light intermediate chain 2 [Monodelphis domestica] Length = 493 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 70/341 (20%), Positives = 122/341 (35%), Gaps = 48/341 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + + G GKTT+L + L+ Sbjct: 28 EEDEGQNLWSSILSEVSTRSR-----------SKLPSGKNILVFGEDGSGKTTLLAK-LQ 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E +K LEY + ++W L G + L++ ++A+ + V+ Sbjct: 76 GAEHSKKGRGLEYLYLNIHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAETLQETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q+ E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRDMEQKFVKDFQEYVEPEEGYQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLASAQDGENVILPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHVRKFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + +I + T+ +P+ D K + H+ Sbjct: 316 NEKKIA---ILHENFTTVKPDDPYEDFIVKPPVRKLVHDKE 353 >gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] Length = 492 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 121/336 (36%), Gaps = 48/336 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 201 LTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQAHLRG 260 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 261 FCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWDNEKKI 320 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 321 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 353 >gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light intermediate chain 2 isoform 3 [Bos taurus] Length = 492 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 122/336 (36%), Gaps = 48/336 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYVEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 201 LTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRR 260 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI+TS K E + +I +G + + IPAG D+ +I Sbjct: 261 FCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKEAVFIPAGWDNEKKI 320 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 321 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 353 >gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 71/334 (21%), Positives = 126/334 (37%), Gaps = 48/334 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+++ R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R V+K+ ++ + + Q Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKQIEQKLIRDFQEYVEPGEDFPASPQGRNTAS 215 Query: 171 HKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L +P+L+V +K D D+ E I +R Sbjct: 216 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 276 LQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG- 334 Query: 277 PVATEVDIGTLHAKNPFD-LWKKVFEKVFPHEST 309 + TL A++ F+ + K + F HE Sbjct: 335 --ILHENFQTLKAEDNFEGIITKPPVRKFVHEKE 366 >gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] gi|5531813|gb|AAD44481.1| dynein light chain-A [Homo sapiens] Length = 523 Score = 338 bits (867), Expect = 4e-91, Method: Composition-based stats. Identities = 72/334 (21%), Positives = 126/334 (37%), Gaps = 48/334 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+++ R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R V+K+ ++ + + QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 215 Query: 171 HKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L +P+L+V +K D D+ E +R Sbjct: 216 QEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFC 275 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 276 LRYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG- 334 Query: 277 PVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL A++ F D+ K + F HE Sbjct: 335 --ILHENFQTLKAEDNFEDIITKPPVRKFVHEKE 366 >gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] gi|73919261|sp|Q9QXU8|DC1L1_RAT Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|6651427|gb|AAF22294.1|AF181992_1 dynein light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 337 bits (866), Expect = 5e-91, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 124/334 (37%), Gaps = 48/334 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW EV +R + P+ + V +G GKT+++ R + E K Sbjct: 48 LWSRILREVSTRSR-----------SKLPTGKNVLLLGEDGAGKTSLIRRI-QGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R V+K+ ++ E + QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRRATAA 215 Query: 171 HKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L +P+L+V +K D D+ E I +R Sbjct: 216 QEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 276 LQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG- 334 Query: 277 PVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL ++ F D+ K + F HE Sbjct: 335 --ILHENFQTLKIEDNFEDIITKPPVRKFVHEKE 366 >gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Homo sapiens] Length = 492 Score = 337 bits (865), Expect = 6e-91, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 121/336 (36%), Gaps = 48/336 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRR 260 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 261 FCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDNEKKI 320 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 321 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 353 >gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Homo sapiens] gi|3287825|sp|O43237|DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|2665836|gb|AAB88513.1| dynein light intermediate chain 2 [Homo sapiens] gi|119603445|gb|EAW83039.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|119603446|gb|EAW83040.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|158256964|dbj|BAF84455.1| unnamed protein product [Homo sapiens] Length = 492 Score = 337 bits (864), Expect = 9e-91, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 121/336 (36%), Gaps = 48/336 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRR 260 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 261 FCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDNEKKI 320 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 321 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 353 >gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|55726458|emb|CAH89998.1| hypothetical protein [Pongo pygmaeus] Length = 492 Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 121/336 (36%), Gaps = 48/336 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRA-----------GSKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRR 260 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 261 FCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDNEKKI 320 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 321 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 353 >gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 [Bos taurus] gi|86438315|gb|AAI12622.1| Similar to Dynein light intermediate chain 1, cytosolic (Dynein light chain A) (DLC-A) [Bos taurus] Length = 524 Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 73/334 (21%), Positives = 125/334 (37%), Gaps = 48/334 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+++ R ++ E K Sbjct: 48 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G L++ + A ++ V+LV+D+SKP Sbjct: 96 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDPYHKGLLKFSLDAISLKDTLVMLVVDMSKP 155 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R ++K+ ++ E + QR Sbjct: 156 WTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQRRSTAS 215 Query: 171 HKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L VP+L+V +K D D+ E I +R Sbjct: 216 QEDRDDSVLLPLGADTLTQNLGVPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 YGA+LI+ S K + +I Q +G + IPAG D+ +IG Sbjct: 276 LQYGAALIYASVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG- 334 Query: 277 PVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL A++ F D+ K + F HE Sbjct: 335 --ILHENFQTLKAEDNFEDIITKPPVRKFVHEKE 366 >gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|67970473|dbj|BAE01579.1| unnamed protein product [Macaca fascicularis] Length = 492 Score = 336 bits (862), Expect = 2e-90, Method: Composition-based stats. Identities = 69/336 (20%), Positives = 122/336 (36%), Gaps = 48/336 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS +++ G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKSILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRR 260 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 261 FCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDNEKKI 320 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 321 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 353 >gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light intermediate chain 2, cytosolic (LIC53/55) (LIC-2) [Canis familiaris] Length = 481 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 68/340 (20%), Positives = 122/340 (35%), Gaps = 48/340 (14%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 + ++ W +EV +R + PS + + G GKTT++ + L+ Sbjct: 18 QGTTLRFWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQG 65 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + ++W L G + L++ ++A+++ V+ V Sbjct: 66 AEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFV 125 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPR 168 D+S+P + E+++ R ++K+ Q E G Q P+ Sbjct: 126 ADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEPEEGCQGSPQ 185 Query: 169 VLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 D L +P+L+V +K D D+ E I Sbjct: 186 RRGPLTSGPDEENVALPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQS 245 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 LR YGA+LI+TS K E + +I +G + IPAG D+ Sbjct: 246 HLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFVTPALVVEKDAVFIPAGWDN 305 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 +I + T+ ++ + D K + H+ Sbjct: 306 EKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 342 >gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light chain A [Gallus gallus] gi|2494217|sp|Q90828|DC1L1_CHICK Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) (LIC57/59) gi|510249|emb|CAA55698.1| dyenin light chain A [Gallus sp.] Length = 515 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 69/341 (20%), Positives = 129/341 (37%), Gaps = 48/341 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS ++V +G GKT+++ + + Sbjct: 31 EEDDGQNLWSCILSEVSTRSR-----------SKLPSGKSVLLLGEDGAGKTSLIGKI-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++ L G + L++ + A+++ ++L Sbjct: 79 GIEEYKKGRGMEYLYLNVHDEDRDDQTRCNVRILDGDLYHKGLLKFAMEANSLKDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGK 163 V+D+S+P ++++ R ++K+ ++ E + Sbjct: 139 VVDMSRPWTAMDSLQKWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFPASP 198 Query: 164 QRVPRVLHKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 QR L +D D L +P+++V +K D D+ E I Sbjct: 199 QRRNTSLQEDKDDSVILPLGADTLTCNLGIPVVVVCTKCDAISVLEKEHDYRDEHFDFIQ 258 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K + +I Q +G + IPAG D Sbjct: 259 SHIRRFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFNVPAVVVEKDAVFIPAGWD 318 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + +IG + TL A++ F D +K + F HE Sbjct: 319 NDKKIG---ILHENFQTLKAEDSFEDSIRKPPVRKFVHEKE 356 >gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 73/347 (21%), Positives = 128/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R S + PS + V G GKTT++ + L+ Sbjct: 24 EDDEGQNLWSSILSEVSTRSS-----------SKLPSGKNVLLFGEDGSGKTTLMSK-LQ 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR-------------------SG 162 V+D+S+P + E+++ R V+K+ ++ E S Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 163 KQRVPRVLHKD------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 ++R P +D D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVFIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + T+ ++PF D K + H+ ++ + Sbjct: 312 DKKIG---ILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQ 355 >gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 3 [Canis familiaris] Length = 225 Score = 335 bits (859), Expect = 4e-90, Method: Composition-based stats. Identities = 130/225 (57%), Positives = 167/225 (74%), Gaps = 3/225 (1%) Query: 135 MESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPFPVPLLIVGS 192 ME+LL + ++ V+K+ L KT +Q++ + KD+PDREL+ PF +PL+I+GS Sbjct: 1 MENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIPLVIIGS 60 Query: 193 KFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 K+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FT SKSE + K R INQLAFG ++ K Sbjct: 61 KYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFT-SKSEALLLKVRGVINQLAFGIDKSK 119 Query: 253 SISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRER 312 SI D +KPL I AG DSLSQIG P + DIG LHA +P DLWKKV+E+VFP +ST Sbjct: 120 SICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVFPPKSTNTL 179 Query: 313 KELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 180 KHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWKQIELD 224 >gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [Danio rerio] Length = 500 Score = 333 bits (856), Expect = 9e-90, Method: Composition-based stats. Identities = 72/347 (20%), Positives = 127/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R S + PS + V G GKTT++ + L+ Sbjct: 24 EDDEGQNLWSSILSEVSTRSS-----------SKLPSGKNVLLFGEDGSGKTTLMSK-LQ 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR-------------------SG 162 V+D+S+P + E+++ R V+K+ ++ E S Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 163 KQRVPRVLHKD------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 ++R P +D D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVFIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +I + T+ ++PF D K + H+ ++ + Sbjct: 312 DKKI---CILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQ 355 >gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] gi|62531080|gb|AAH93336.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 332 bits (853), Expect = 2e-89, Method: Composition-based stats. Identities = 73/347 (21%), Positives = 128/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R S + PS + V G GKTT++ + L+ Sbjct: 24 EDDEGQNLWSSILSEVSTRSS-----------SKLPSGKNVLLFGEDGSGKTTLMSK-LQ 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR-------------------SG 162 V+D+S+P + E+++ R V+K+ ++ E S Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 163 KQRVPRVLHKD------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 ++R P +D D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVLIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + T+ ++PF D K + H+ ++ + Sbjct: 312 DKKIG---ILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQ 355 >gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] Length = 335 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 70/328 (21%), Positives = 124/328 (37%), Gaps = 48/328 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P+ + V +G GKT+++ R ++ E K Sbjct: 22 LWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 69 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ + A ++ V+LV+D+SKP Sbjct: 70 GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 129 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRVPRVL 170 ++++ R V+K+ ++ + + QR Sbjct: 130 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 189 Query: 171 HKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLA 216 +D D L +P+L+V +K D D+ E I +R Sbjct: 190 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 249 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 250 LQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG- 308 Query: 277 PVATEVDIGTLHAKNPF-DLWKKVFEKV 303 + TL A++ F D+ K + Sbjct: 309 --ILHENFQTLKAEDNFEDIITKPPVRK 334 >gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoobscura] gi|54645577|gb|EAL34315.1| GA17674-PA [Drosophila pseudoobscura] Length = 368 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 22/347 (6%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 ++ ++ DIA R + + + E P +RT+ +GSK GK+T + +F +R+E Sbjct: 28 ATPSIQDIA-----GRLAEEQQRLRQLEATSMPKERTLLVLGSKCVGKSTAINKFFDREE 82 Query: 65 TA-KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVL 123 +PTLALEY+FGRR +P+ + ++WELG + L+++P+ + L+V +++ Sbjct: 83 HTTRPTLALEYSFGRRIGSGRSPQ-VINVWELGSLDNADQLLEVPMRTHGLQQLAVFIMV 141 Query: 124 DLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPF 183 DLS+P W +E R +++ A + ++ + RV H++ D + Sbjct: 142 DLSQPQRFWTDLECAYKGLRVTSQELLARMTPELRETLEQRTLERVGHQNKEDLGTLELL 201 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P P++IVG K+D+F D +K IC+ LR +AH G +L+F S K R I+ Sbjct: 202 PFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGALLFYSQKVPKLSKVLRDTISH 261 Query: 244 LAFGTE--RPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFE 301 + FG+ +S TD ++PL++ G+DS S+IG A V + F Sbjct: 262 MGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDTGAQSV-----------ERIGATFG 310 Query: 302 KVFP--HESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 P + ++ +DP KDP F E LID +RAQK++EL R+ Sbjct: 311 VAVPQLQLEKQLQQVPQDPAKDPGFKESLIDEMRAQKNEELATIMRD 357 >gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Gallus gallus] gi|53126839|emb|CAG30989.1| hypothetical protein [Gallus gallus] Length = 488 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 66/333 (19%), Positives = 121/333 (36%), Gaps = 47/333 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + + G GKTT++ + + E K Sbjct: 31 LWSSILSEVSTRSR-----------SKLPSGKNILVFGDDGSGKTTLMAKI-QGAEHGKK 78 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + ++W L G + L++ ++A+++ VV V D+S+P Sbjct: 79 GRGLEYLYLNIHDEDRDDQTRCNVWILDGDLYNKGLLKFAVSAESLQDTIVVFVADMSRP 138 Query: 129 NALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK-- 172 + E+++ + ++K+ Q+ E G Q P+ Sbjct: 139 WTVMESLQKWASVLQEHIDKLKIPPEEMRDMEQKFIKEFQEYVEPEEGYQGSPQRRGPSS 198 Query: 173 ---------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 + L +P+L+V +K D D+ E I +R Sbjct: 199 GQEDESVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHIRRFCL 258 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA+LI+TS K E + +I +G + + IPAG D+ +I Sbjct: 259 QYGAALIYTSVKEEKNLDLLYKYIVHKTYGFQFTTPALVVEKDAVFIPAGWDNEKKIA-- 316 Query: 278 VATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ + + D K + H+ Sbjct: 317 -ILHENFTTVKPDDAYEDFIAKPPVRKLVHDKE 348 >gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 [Xenopus tropicalis] gi|111305599|gb|AAI21354.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Xenopus tropicalis] Length = 508 Score = 328 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 123/333 (36%), Gaps = 47/333 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V +G GKT+++ + L+ E K Sbjct: 38 LWSSILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGK-LQGIEEYKK 85 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 +EY + + ++W L G + L++ + +V ++LV+D+S+P Sbjct: 86 GRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIMLVVDMSRP 145 Query: 129 NALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP--RVLHK 172 ++++ R V+K+ Q+ E P R Sbjct: 146 WLALDSLQKWASVIREHVDKLKIPPEEMKEMEEKIVRNFQEYVEPGEEFPASPQKRNTSS 205 Query: 173 DYPDRE---------LISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 D D L +P+++V +K D D+ E I +R Sbjct: 206 DEQDDSVILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQSHIRKFCL 265 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA+LI+TS K + +I Q +G + IPAG D+ +IG Sbjct: 266 QYGAALIYTSIKENKNIDIVYKYIVQQLYGFLFNMPAVVVEKDAVFIPAGWDNDKKIG-- 323 Query: 278 VATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL ++ F D+ K + F HE Sbjct: 324 -ILHENFQTLKPEDTFEDIITKPPVRKFVHEKE 355 >gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-intermediate chain [Xenopus laevis] gi|28280005|gb|AAH45030.1| Dnclic1-prov protein [Xenopus laevis] Length = 508 Score = 327 bits (840), Expect = 6e-88, Method: Composition-based stats. Identities = 69/333 (20%), Positives = 124/333 (37%), Gaps = 47/333 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + P + V +G GKT+++ + L+ E K Sbjct: 38 LWSSILSEVSTRSR-----------SKLPFGKNVLLLGEDGAGKTSLIGK-LQGIEEYKK 85 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 +EY + + ++W L G + L++ + +V ++LV+D+S+P Sbjct: 86 GRGMEYLYINVHDDDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIMLVVDMSRP 145 Query: 129 NALWETMESLLGSARNQVEKVCAA--------------LQKTGES----RSGKQRVPRVL 170 ++++ R V+K+ Q+ E + QR Sbjct: 146 WLALDSLQKWASVIREHVDKLKIPPEEMREMEERIVRHFQEYVEPGDELPTSPQRRNTSS 205 Query: 171 HK-------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 + D L +P+++V +K D D+ E I +R Sbjct: 206 DECDDSVILPLADDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQSHIRKFCL 265 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA+LI+TS K + +I Q +G + + IPAG D+ +IG Sbjct: 266 QYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFKMPAVVVEKDAVFIPAGWDNDKKIG-- 323 Query: 278 VATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL ++ F D+ K + F HE Sbjct: 324 -ILHENFQTLKPEDTFEDVITKPPVRKFVHEKE 355 >gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] gi|11992258|gb|AAG42486.1|AF317841_1 cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] Length = 508 Score = 325 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 69/333 (20%), Positives = 125/333 (37%), Gaps = 47/333 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V +G GKT+++ + L+ E K Sbjct: 38 LWSSILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGK-LQGIEEYKK 85 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 +EY + + ++W L G + L++ NV ++LV+D+S+P Sbjct: 86 GRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIMLVVDMSRP 145 Query: 129 NALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVPRVLHKDY 174 ++++ R ++K+ Q+ E P+ + Sbjct: 146 WLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASPQRRNTSS 205 Query: 175 PDRE-----------LISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 +R+ L +P+++V +K D D+ E I +R Sbjct: 206 EERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQSHIRKFCL 265 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA+LI+TS K + +I Q +G + + IPAG D+ +IG Sbjct: 266 QYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMPAVVVEKDAVFIPAGWDNDKKIG-- 323 Query: 278 VATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL ++ F D+ K + F HE Sbjct: 324 -ILHENFQTLKLEDTFEDIIIKPPVRKFVHEKE 355 >gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] Length = 508 Score = 324 bits (831), Expect = 7e-87, Method: Composition-based stats. Identities = 69/333 (20%), Positives = 125/333 (37%), Gaps = 47/333 (14%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V +G GKT+++ + L+ E K Sbjct: 38 LWSSILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGK-LQGIEEYKK 85 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 +EY + + ++W L G + L++ NV ++LV+D+S+P Sbjct: 86 GRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIMLVVDMSRP 145 Query: 129 NALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVPRVLHKDY 174 ++++ R ++K+ Q+ E P+ + Sbjct: 146 WLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASPQRRNTSS 205 Query: 175 PDRE-----------LISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 +R+ L +P+++V +K D D+ E I +R Sbjct: 206 EERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQSHIRKFCL 265 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA+LI+TS K + +I Q +G + + IPAG D+ +IG Sbjct: 266 QYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMPAVVVEKDAVFIPAGWDNDRKIG-- 323 Query: 278 VATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + TL ++ F D+ K + F HE Sbjct: 324 -ILHENFQTLKLEDTFEDIIIKPPVRKFVHEKE 355 >gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Trypanosoma brucei TREU927] gi|70835124|gb|EAN80626.1| dynein light intermediate chain, putative [Trypanosoma brucei] Length = 418 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 95/375 (25%), Positives = 168/375 (44%), Gaps = 39/375 (10%) Query: 3 KVSSDTLWDIAAAE-VRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 ++ D D+ + ++E+ + S+ +F +G GKT+++ R Sbjct: 57 QIVVDPTKDLWQNIALNTKENNLPQ-----------SEANLFVVGCSGAGKTSVIQRVCS 105 Query: 62 -----------RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPIT 110 KPT AL+Y + R+ H + H WEL G+ LS L ++ IT Sbjct: 106 AIGAGGNTSGKGKTKVKPTTALDYQYTTRSDRHVS--QTVHFWELAQGMELSQLCEVVIT 163 Query: 111 ADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRVPR 168 +NV + + +V+D S P+++W+T+ L + ++ ++ G + K R R Sbjct: 164 PENVHLMHIAIVVDFSDPSSMWDTLAYWLKRVDRRANEILQKMRAKGSNTPDKLHARAQR 223 Query: 169 VLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSS 228 L + +PD + + +P +IV +K D F E+ K + + LRF+AH YGA L+F+S Sbjct: 224 ALGEGHPDLKRVRLSGLPTVIVCNKVDAFPG-PMEQMKTLTRCLRFIAHLYGAYLVFSSD 282 Query: 229 KSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPV-ATEVDIGTL 287 + + + L R + + L +P +D+ IG P G + Sbjct: 283 ADSAKLRLLLNHLLFLTPFDARQVELDVERGTILIMPE-NDTFVDIGDPPLCDGPSGGPV 341 Query: 288 ---HAKNPFDLWKKVFEKVFPHESTRERKELKDPVK------DPQFSEPLIDSIRAQKDQ 338 + D WK + +FP ++ R + +K + F EP ID+IR QKD+ Sbjct: 342 TQSTGDSELDRWKVPLDAMFPPKAGGGRAQSDAMLKRLYDMGEGGFGEPTIDTIRRQKDE 401 Query: 339 ELDQYKREQAKSWKS 353 EL+QY++ A+ K Sbjct: 402 ELEQYRKSAARRDKG 416 >gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon nigroviridis] Length = 463 Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 67/337 (19%), Positives = 125/337 (37%), Gaps = 46/337 (13%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 ++V +R S + PS + + G GKTT++ + LE E K Sbjct: 1 SSILSDVSTRSS-----------SKLPSGKNILVFGEDGSGKTTLMAK-LEGAEHNKKGR 48 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + ++W L G + L++ ++A ++S V V+D+S+P Sbjct: 49 GLEYLYLSVHDEDRDDLTRCNVWILDGDLYHKGLLKFAVSAKSLSDCLAVFVVDMSRPWI 108 Query: 131 LWETMESLLGSARNQVEKVCAA--------------LQKTGESR----SGKQRVPRVLHK 172 + ++++ R+ ++K+ Q+ E S QR + Sbjct: 109 IMDSLQKWSSVLRDHLDKLKIEPDVMREMEQKMVKAFQEYSEPEDANSSSPQRRAPTAGE 168 Query: 173 D------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYG 220 D + L +P+L+V +K D D+ E I +R YG Sbjct: 169 DEAVVLPLGENTLTHNLGIPVLVVCTKCDAVSVLEKEHDYKEEHFDFIQSHIRKFCLQYG 228 Query: 221 ASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVAT 280 A L +TS K E + +I + + + IP+G D+ +I Sbjct: 229 AGLFYTSVKEEKNLDLLYKYIVHKLYDFQFTTPALVVEKDAVFIPSGWDNEKKIA---IL 285 Query: 281 EVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 ++ T+ ++PF D K + HE ++ + Sbjct: 286 HENLSTVRPEDPFEDFIAKPPVRKLVHEKEINAEDEQ 322 >gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 374 Score = 320 bits (820), Expect = 1e-85, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 115/310 (37%), Gaps = 46/310 (14%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 +EV +R + PS +T+ +G GKTT++ + L+ E + Sbjct: 64 SSILSEVSTRSR-----------SKLPSGKTILVLGDNGSGKTTLMAK-LQGAEHGQKGR 111 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + ++W L G I L++ ++A+++ V+ V+D+S+P Sbjct: 112 GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWT 171 Query: 131 LWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQ-----RVPRVLH 171 E++E G R ++K+ Q+ E Q R P Sbjct: 172 AMESLEKWAGVLREHIDKLKIPPEETRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQ 231 Query: 172 KD------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 ++ + L +P+L+V +K D + + E I +R Y Sbjct: 232 ENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQY 291 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 GA+LI+TS K E + ++ +G + + IPAG D+ +I Sbjct: 292 GAALIYTSVKGEKNLDLLYKYLVHKMYGFQLTTPALVVEKDAVFIPAGWDNEKKIA---I 348 Query: 280 TEVDIGTLHA 289 + + Sbjct: 349 LHENFTRVKP 358 >gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Xenopus laevis] gi|112419317|gb|AAI22489.1| MGC154222 protein [Xenopus laevis] Length = 487 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 64/341 (18%), Positives = 120/341 (35%), Gaps = 48/341 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW ++V + + PS + + G GKTT++ + L+ Sbjct: 21 EEDEGQSLWSSILSDVST-----------SARSKLPSGKNILVFGEDGSGKTTLMAK-LQ 68 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ + A+++S V Sbjct: 69 GAEHNKKGRGLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESISETVAVF 128 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVP 167 V D+S+P + E++ R ++K+ Q+ E P Sbjct: 129 VGDMSRPWTIMESLLKWASVLREHIDKLKIPPEEMRELEQKIIKDFQEYVEPEEALSGSP 188 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 189 QRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDFIQ 248 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YG++LI+TS K E + +I + ++ + IPAG D Sbjct: 249 SHIRKFCLQYGSALIYTSVKEEKNLDLLYKYIVHKTYNFHFNRAAMVVEKDSVFIPAGWD 308 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + +IG + T+ ++ + D K + H+ Sbjct: 309 NEKKIG---ILHENFSTVKPEDAYEDFIVKPPVRKLVHDKE 346 >gi|146097038|ref|XP_001468017.1| dynein light intermediate chain [Leishmania infantum JPCM5] gi|134072383|emb|CAM71091.1| dynein light intermediate chain, putative [Leishmania infantum] Length = 424 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 98/370 (26%), Positives = 174/370 (47%), Gaps = 38/370 (10%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD 63 + D D+ +R + E + ++ +G+ GKTT+L R Sbjct: 65 IVIDPTKDLWQNI--TRNIKDANVEQT--------ETSLVMVGASGSGKTTLLHRIYTSF 114 Query: 64 E---------TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNV 114 + K T AL+Y+F RR+ + P +AH WE+ G S L+ I +T +NV Sbjct: 115 QSSSSGSGPKRVKATTALDYSFARRSERNVAP--VAHFWEIAQGTQFSQLLDIVLTPENV 172 Query: 115 SFLSVVLVLDLSKPN--ALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRVPRVL 170 ++ +V+D S+ WET L +V + ++ G + K R + + Sbjct: 173 HAVAAAVVVDASEEGLPVSWETATYWLRRLDQRVSDISQRMKAKGSTTPAKILTRAQKAI 232 Query: 171 HKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKS 230 D+PD + + +P ++V +K D F+ D ++ K++C+++R+LAH YGA ++FTS + Sbjct: 233 GLDHPDLKRMRLSGIPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQE 291 Query: 231 ETTMSKSRSFINQLAFGTER-PKSISTDPSK-PLAIPAGSDSLSQIGPPVATEVDIGTLH 288 + R+ +N F PK + TDP + + + DS IG P + + Sbjct: 292 SV---RWRALMNFTLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGDPDVSRLGGSVST 348 Query: 289 AKNPFDLWKKVFEKVFPHESTRERKELKDP-------VKDPQFSEPLIDSIRAQKDQELD 341 D WK F++ FP + E K + DP + F +P+ID++R QKD+EL+ Sbjct: 349 GDAELDRWKAPFDEAFPPKKLNEDKVMDDPFIRRLYDTAEGGFGDPVIDALRKQKDEELE 408 Query: 342 QYKREQAKSW 351 QY+++ + + Sbjct: 409 QYRKKSSNAA 418 >gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin light chain A [Ornithorhynchus anatinus] Length = 471 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 67/314 (21%), Positives = 122/314 (38%), Gaps = 37/314 (11%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKD 88 ++ +H ++ T + G GKT+++ + DE K +EY + + Sbjct: 4 SQAPSSHLLAKGTAWGQGEDGAGKTSLIGKMQGIDE-YKKGRGMEYLYLNVHDEDRDDQT 62 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 ++W L G + L++ + A+++ V+LV+D+SKP ++++ R ++K Sbjct: 63 RCNVWILDGDLYHKGLLKFAMDANSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHIDK 122 Query: 149 VCAALQKTGESR------------------SGKQRVPRVLHKDYPD--------RELISP 182 + ++ E + QR +D D L Sbjct: 123 LKIPPEEMKEMEQKLIRDFQEYIEPGEDFPASPQRRNTTSQEDKDDSVILPLGADTLTYN 182 Query: 183 FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSK 236 +P+L+V +K D D+ E I +R YGA+LI+TS K + Sbjct: 183 LGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDL 242 Query: 237 SRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DL 295 +I Q +G + IPAG D+ +IG + TL A++ F D+ Sbjct: 243 VYKYIVQKLYGFPFKIPAVVVEKDAVFIPAGWDNDKKIG---ILHENFQTLKAEDSFEDI 299 Query: 296 WKKVFEKVFPHEST 309 K + F HE Sbjct: 300 IIKPPVRKFVHEKE 313 >gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein, partial [Gallus gallus] Length = 388 Score = 314 bits (805), Expect = 6e-84, Method: Composition-based stats. Identities = 63/328 (19%), Positives = 118/328 (35%), Gaps = 47/328 (14%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 +EV +R + PS +T+ +G GKTT++ + L+ E + Sbjct: 1 SSILSEVSTRSR-----------SKLPSGKTILVLGDNGSGKTTLMAK-LQGAEHGQKGR 48 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + ++W L G I L++ ++A+++ V+ V+D+S+P Sbjct: 49 GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWT 108 Query: 131 LWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK---- 172 + E++E G R ++K+ Q+ E Q + Sbjct: 109 VMESLEKWAGVLREHIDKLKIPPEEMRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQ 168 Query: 173 -------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + L +P+L+V +K D + + E I +R Y Sbjct: 169 ENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQY 228 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 GA+LI+TS K E + ++ +G + + IPAG D+ +I Sbjct: 229 GAALIYTSVKGEKNLDLLYKYLVHKMYGFQLTTPALVVEKDAVFIPAGWDNEKKIA---I 285 Query: 280 TEVDIGTLHAKNPF-DLWKKVFEKVFPH 306 + + + D K + H Sbjct: 286 LHENFTRVKPGYAYEDFIAKPRVRKLVH 313 >gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] Length = 480 Score = 312 bits (799), Expect = 4e-83, Method: Composition-based stats. Identities = 63/340 (18%), Positives = 113/340 (33%), Gaps = 48/340 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW ++V + + PS + + G GKTT++ + L+ Sbjct: 16 EEDEGQSLWSSILSDVST-----------SARSKLPSGKNILVFGEDGSGKTTLVAK-LQ 63 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ + A+++ V Sbjct: 64 GAEHNKKGRGLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESIGETVAVF 123 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVP 167 V D+S+P + E++ R ++K+ Q+ E P Sbjct: 124 VGDMSRPWTIMESLLKWASVLREHIDKLKIPPEEIRELEQKIIKDFQEYVEPEDALSGSP 183 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 184 QRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDFIQ 243 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K E + +I + + + IPAG D Sbjct: 244 SHIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYNFHFNCAAMVVEKDSVFIPAGWD 303 Query: 270 SLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHEST 309 + +IG + D K + H+ Sbjct: 304 NEKKIG---ILHENFSKPEDAYE-DFIVKPPVRKLVHDKE 339 >gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A isoform 1 [Pan troglodytes] Length = 472 Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 69/323 (21%), Positives = 119/323 (36%), Gaps = 44/323 (13%) Query: 20 RESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRR 79 RE + + PS G GKT+++ + + E K LEY + Sbjct: 4 REGEHETLDPGPAGTRPPS-------GEDGAGKTSLIRKI-QGIEEYKKGRGLEYLYLNV 55 Query: 80 ARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLL 139 + ++W L G + L++ + A ++ V+LV+D+SKP ++++ Sbjct: 56 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWA 115 Query: 140 GSARNQVEKVCAALQKTGESR------------------SGKQRVPRVLHKDYPD----- 176 R V+K+ ++ + + QR +D D Sbjct: 116 SVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVLP 175 Query: 177 ---RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTS 227 L +P+L+V +K D D+ E I +R YGA+LI+TS Sbjct: 176 LGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTS 235 Query: 228 SKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTL 287 K + +I Q +G + IPAG D+ +IG + TL Sbjct: 236 VKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG---ILHENFQTL 292 Query: 288 HAKNPF-DLWKKVFEKVFPHEST 309 A++ F D+ K + F HE Sbjct: 293 KAEDNFEDIITKPPVRKFVHEKE 315 >gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00000012631 [Nasonia vitripennis] Length = 357 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 101/347 (29%), Positives = 181/347 (52%), Gaps = 18/347 (5%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 T D A + D + D ++++ +GS+ GKTT++ RFLE+++T K Sbjct: 6 TNQDNARELALQASIQEDT--QRKTDPEESHEKSLIILGSREVGKTTMIYRFLEKEDTPK 63 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGG--GISLSDLVQIPITADNVSFLSVVLVLDL 125 PTLA++Y++GR+A G + KD+ H+WE+G +S ++ + + +V+++LDL Sbjct: 64 PTLAMDYSYGRKA-GKSLVKDVVHVWEVGHLAPSLISGSMRGCTLSHSAHHTTVLIMLDL 122 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRE--LISPF 183 KP+ LW ++E L + R + + + + R K R R K + E + PF Sbjct: 123 GKPDVLWNSLEECLVAVRAAM-MMSYQQELVHDLRERKIRYLRERAKPGTEDEPPVDDPF 181 Query: 184 PVPLLIVGSKFDIFQDFDS-EKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 P+ L ++G K+D F++ S + ++ I + LR AH GA L + S+K + +++ ++ Sbjct: 182 PMRLCLIGGKYDEFRELHSGDDKESIGQALRAAAHVLGAGLHYHSAKDSHLLRRTKELLS 241 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 F + K+ TD KPL++ AGSDS S I ++ T D K+++ + Sbjct: 242 HYGFKGQSTKASVTDYDKPLSVAAGSDSFSAIDLKISRNDYAVT------LDEIKQIYVR 295 Query: 303 VFPHESTRER---KELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 FP + ++ DP DP F+EP++D +R Q++QE+ R+ Sbjct: 296 RFPQVPKNQDVLPGDMDDPANDPNFNEPIVDRLRLQREQEISVLLRD 342 >gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic, light intermediate polypeptide 2 [Macaca mulatta] Length = 497 Score = 310 bits (796), Expect = 7e-83, Method: Composition-based stats. Identities = 66/341 (19%), Positives = 120/341 (35%), Gaps = 53/341 (15%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF-----------QDFDSEKRKVIC 209 D L +P+L+V +K F + ++ Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKVRARGLLAWLGSGSEHAFREKNVRIFD 260 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 261 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 320 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + +I + T+ ++ + D K + H+ Sbjct: 321 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 358 >gi|157874331|ref|XP_001685649.1| dynein light intermediate chain, putative [Leishmania major] gi|68128721|emb|CAJ08854.1| dynein light intermediate chain, putative [Leishmania major] Length = 425 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 99/364 (27%), Positives = 168/364 (46%), Gaps = 39/364 (10%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL--- 60 + D D+ +R + E + ++ +G+ GKTT+L R Sbjct: 65 IVIDPTKDLWQNI--TRNVKDANVEQT--------ETSLVVVGASGSGKTTLLHRIYTSF 114 Query: 61 ------ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNV 114 + K T AL+Y+F RR+ + P +AH WE+ G S L+ I +T +NV Sbjct: 115 QSNSSGSGPKRVKATTALDYSFARRSERNVAP--VAHFWEIAQGTQFSQLLDIVVTPENV 172 Query: 115 SFLSVVLVLDLSKPN--ALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRVPRVL 170 + +V+D S+ WET L +V + ++ G + K R + + Sbjct: 173 HAVVAAVVVDASEEGLPVAWETATYWLRRLDQRVSDISQRMKAKGSTTPAKILTRAQKAI 232 Query: 171 HKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKS 230 D+PD + + VP ++V +K D F+ D ++ K +C+++R+LAH YGA ++FTS + Sbjct: 233 GLDHPDLKRMRLSGVPTVLVINKIDAFRR-DMQQLKFLCRSMRYLAHLYGAHVVFTSEQE 291 Query: 231 ETTMSKSRSFINQLAFGTER-PKSISTDPSK-PLAIPAGSDSLSQIGPPVATEVDIGTLH 288 + R+ +N F PK + TDP + + + DS IG P + + Sbjct: 292 SV---RWRALMNFTLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGDPDVSRLGGSAST 348 Query: 289 AKNPFDLWKKVFEKVFPHESTRER-KELKDP-------VKDPQFSEPLIDSIRAQKDQEL 340 D WK F++ FP + E K + DP + F +P+ID++R QKD+EL Sbjct: 349 GDAELDRWKAPFDEAFPPKKLNEEGKVVDDPFIRRLYDTSEGGFGDPVIDALRKQKDEEL 408 Query: 341 DQYK 344 +QY+ Sbjct: 409 EQYR 412 >gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon nigroviridis] Length = 400 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 65/318 (20%), Positives = 120/318 (37%), Gaps = 32/318 (10%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E + + PS + V MG GKTT++ + DE K LEY + Sbjct: 6 EVSTHSRSKLPSGKNVLVMGEVGSGKTTLVAKLQGVDEYMK-GRGLEYLYFSVHDDDIDD 64 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 + W L G + L + + D++ +++ +D+S+P ++++ AR + Sbjct: 65 HARCNAWVLDGDLYHKGLQGVAVPVDSIGNTLLLITVDMSRPWNALDSLQKWAAVAREHI 124 Query: 147 EKV--------------CAALQKTGESRSGKQRVPRVLHKDYP-------DRELISPFPV 185 +K+ Q+ E SG+ P+ +D D L + Sbjct: 125 DKLRVAPETLRELEHNLVKQFQEYVEPGSGEDGTPQRRSEDEESILLPLGDSTLTHNLGI 184 Query: 186 PLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 P+++V +K D D+ E I LR YGASL++TS K + Sbjct: 185 PVVVVCTKCDAIGTLEKEHDYRDEHLDFIQSHLRRFCLQYGASLVYTSVKEMKNLDILYK 244 Query: 240 FINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKK 298 ++ +G P + IP+G D+ +I + T + + F D+ K Sbjct: 245 YLVHRLYGFPFPCPAQVVERDAVFIPSGWDNEKKIA---ILHENFQTFKSDDTFEDVIVK 301 Query: 299 VFEKVFPHESTRERKELK 316 + HE + ++ + Sbjct: 302 PPVRKIVHEKEIQAEDDQ 319 >gi|154343515|ref|XP_001567703.1| dynein light intermediate chain, putative [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065035|emb|CAM43147.1| dynein light intermediate chain, putative [Leishmania braziliensis] Length = 428 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 100/375 (26%), Positives = 176/375 (46%), Gaps = 42/375 (11%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 ++ D D+ +R + E E + +G+ GKTT+L R Sbjct: 64 QIVIDPTKDLWQNI--TRNVKDAAVEQTEI--------NLVVVGAPGSGKTTLLHRIYTS 113 Query: 63 DETA---------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADN 113 +++ K T AL+Y+F RR+ + P +AH WE+ G+ S L+ + +T +N Sbjct: 114 FQSSASGSCSKRVKATTALDYSFARRSERNVAP--VAHFWEIAQGMQFSQLLDVVVTPEN 171 Query: 114 VSFLSVVLVLDLSKPN--ALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRVPRV 169 V + +V+D S+ WE + +V + ++ G + K R + Sbjct: 172 VHAIVAAVVVDASEEGLPVAWEAATYWMRRIDQRVSDISQRMKAKGSTTPEKLLTRAQKA 231 Query: 170 LHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSK 229 + ++PD + + VP ++V +K D F+ D ++ K++C+++R+LAH YGA ++FTS + Sbjct: 232 VGLEHPDLKRMRLSGVPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQ 290 Query: 230 SETTMSKSRSFINQLAFGTER-PKSISTDPSK-PLAIPAGSDSLSQIGPPVATEVDIGTL 287 + R+ +N F PK + TDP + + + A DS IG P + + G Sbjct: 291 ESV---RWRALMNFTLFQAPFDPKHLQTDPERGAVLLTADRDSFLDIGDPNMSRLGGGGS 347 Query: 288 HA---KNPFDLWKKVFEKVFPHESTRE-RKELKDP-------VKDPQFSEPLIDSIRAQK 336 A D WK F+ FP + E K + DP + F EP+ID++R QK Sbjct: 348 SASTGDAELDRWKVPFDDAFPPKKLNEEDKVMDDPFIRRLYDTSEGGFGEPMIDTLRKQK 407 Query: 337 DQELDQYKREQAKSW 351 D+EL+QY++ + + Sbjct: 408 DEELEQYRKNSSNAA 422 >gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632687|emb|CAM56700.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 489 Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats. Identities = 67/338 (19%), Positives = 125/338 (36%), Gaps = 45/338 (13%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V MG GKTT++ + L+ E Sbjct: 32 LWSSILSEVSTRSR-----------SKLPSGKNVVVMGEVGSGKTTLVAK-LQGVEEYMK 79 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + + W L G + L + I+ +N+ ++ V+DLS+P Sbjct: 80 GRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSRP 139 Query: 129 NALWETMESLLGSARNQVEKVC--------------AALQKTGESRSG----KQRV---- 166 ++++ R+ V+K+ Q+ E S QR Sbjct: 140 WLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQRRNPES 199 Query: 167 -PRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + + L +P+++V +K D D+ E I +R Y Sbjct: 200 DEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIRRFCLQY 259 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 GA+L++TS K + ++ +G + IP+G D+ +I Sbjct: 260 GAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEKKIA---I 316 Query: 280 TEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + + A++ F D+ K + F HE + ++ + Sbjct: 317 LHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQ 354 >gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] Length = 485 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 123/338 (36%), Gaps = 45/338 (13%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V MG GKTT++ + L+ E Sbjct: 28 LWSSILSEVSTRSR-----------SKLPSGKNVVVMGEVGSGKTTLVAK-LQGVEEYMK 75 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + + W L G + L + I+ +N+ ++ V+DLS+P Sbjct: 76 GRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSRP 135 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGE-----------------------SRSGKQR 165 ++++ R+ V+K+ + E R + Sbjct: 136 WLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQRRNPES 195 Query: 166 VPRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + + L +P+++V +K D D+ E I +R Y Sbjct: 196 DEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIRRFCLQY 255 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 GA+L++TS K + ++ +G + IP+G D+ +I Sbjct: 256 GAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEKKIA---I 312 Query: 280 TEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + + A++ F D+ K + F HE + ++ + Sbjct: 313 LHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQ 350 >gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light intermediate chain 1 [Danio rerio] gi|94733316|emb|CAK11123.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632686|emb|CAM56699.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 501 Score = 301 bits (772), Expect = 4e-80, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 123/338 (36%), Gaps = 45/338 (13%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP 68 LW +EV +R + PS + V MG GKTT++ + L+ E Sbjct: 34 LWSSILSEVSTRSR-----------SKLPSGKNVVVMGEVGSGKTTLVAK-LQGVEEYMK 81 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 LEY + + + W L G + L + I+ +N+ ++ V+DLS+P Sbjct: 82 GRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSRP 141 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGE-----------------------SRSGKQR 165 ++++ R+ V+K+ + E R + Sbjct: 142 WLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQRRNPES 201 Query: 166 VPRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + + L +P+++V +K D D+ E I +R Y Sbjct: 202 DEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIRRFCLQY 261 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 GA+L++TS K + ++ +G + IP+G D+ +I Sbjct: 262 GAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEKKIA---I 318 Query: 280 TEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + + A++ F D+ K + F HE + ++ + Sbjct: 319 LHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQ 356 >gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 light intermediate chain [Apis mellifera] Length = 345 Score = 299 bits (767), Expect = 2e-79, Method: Composition-based stats. Identities = 112/321 (34%), Positives = 182/321 (56%), Gaps = 19/321 (5%) Query: 25 DEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHN 84 +EE+ + + + +R++ +GSK GKTTI+ RFLE+DE KPT+A++Y+FGR+A G + Sbjct: 20 EEEQRRKTNPNETHERSIIIVGSKRVGKTTIVHRFLEKDEAPKPTIAMDYSFGRKA-GKS 78 Query: 85 TPKDIAHLWELGGGISLSDLVQIPITADNV----SFLSVVLVLDLSKPNALWETMESLLG 140 K+I H+WE+G S LV +T ++ ++++++LDLS+P LW T E L Sbjct: 79 LIKNIVHVWEVGHLT--SSLVSAAMTGSSLTHSPHHVTILVILDLSQPEILWTTFEEALS 136 Query: 141 SARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDF 200 RN + + KQR+ K ++E I PFP+ L +G K+D F+D Sbjct: 137 VVRNAM---KMSYDDKIIQELKKQRIKER--KKIVEKE-IDPFPMRLCFIGGKYDQFKDL 190 Query: 201 DSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSK 260 D +K++++ KTLR +AH GASL + S+K ++ + + + ++ FGT+ TD K Sbjct: 191 DLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIKDLLSYYGFGTQFSDIKCTDFEK 250 Query: 261 PLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVK 320 PLAI AG+DS S I ++ D K+++ P ES L+DP Sbjct: 251 PLAISAGTDSFSSI------DLQFPQTRPSAMLDTIKQIYVTHIPQESRSNEIILEDPSN 304 Query: 321 DPQFSEPLIDSIRAQKDQELD 341 DP F+EP+ID +R Q+++E++ Sbjct: 305 DPNFNEPIIDRLRTQREEEIN 325 >gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermediate chain [Tetrahymena thermophila] Length = 474 Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 172/345 (49%), Gaps = 22/345 (6%) Query: 15 AEVRSRESRTDEEEAEEEDAHF------PSQRTVFFMGSKAGGKTT---ILLRFLERDET 65 EV + + + E++ ++T+ +G K GKTT IL + D+ Sbjct: 13 NEVNKGDRSNIDLWSHAEESELKQGFAKNLEKTLVVIGDKGSGKTTFVNILKNMQQVDDR 72 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 PT+ L+Y + RR + K++ H +ELGGG S ++ IPI+ N +LVLDL Sbjct: 73 YIPTVGLDYQYVRRTNANR--KELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLDL 130 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGE---SRSGKQRVPRVLHKDYPDRELISP 182 SKP+ + E+ R Q+++ T E RS + + + +PD+ + Sbjct: 131 SKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQARFESHPDKNRVKI 190 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 P+ +++G K+D+F+ DSE RK + +TLR+LAH GASL F SSK+ RS +N Sbjct: 191 LPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSKNNDLFQNVRSIMN 250 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 FG + ++ +P+ I D L+++G P + G + + +KKV ++ Sbjct: 251 NALFGKTLAQYYQSEHLRPIEISLSKDELAKMGLPQIS----GNMTY---LEAFKKVIQE 303 Query: 303 VFPHESTRERKELKDPVK-DPQFSEPLIDSIRAQKDQELDQYKRE 346 FP + +DP++ +F E IDSIRA+KD+E+ +E Sbjct: 304 TFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKE 348 >gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 233 Score = 298 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 111/184 (60%), Positives = 140/184 (76%), Gaps = 1/184 (0%) Query: 174 YPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 DRELI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FT SKSE Sbjct: 50 LKDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFT-SKSEAL 108 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 + K R INQLAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P Sbjct: 109 LLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPM 168 Query: 294 DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKS 353 +LWKKV++K+FP +ST K ++DP +DPQ++E +D +R QKDQEL+ YKR +K+WK Sbjct: 169 ELWKKVYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWKQ 228 Query: 354 LALD 357 + LD Sbjct: 229 IELD 232 >gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] gi|89300006|gb|EAR97994.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] Length = 487 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 102/358 (28%), Positives = 172/358 (48%), Gaps = 35/358 (9%) Query: 15 AEVRSRESRTDEEEAEEEDAHF------PSQRTVFFMGSKAGGKTT---ILLRFLERDET 65 EV + + + E++ ++T+ +G K GKTT IL + D+ Sbjct: 13 NEVNKGDRSNIDLWSHAEESELKQGFAKNLEKTLVVIGDKGSGKTTFVNILKNMQQVDDR 72 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 PT+ L+Y + RR + K++ H +ELGGG S ++ IPI+ N +LVLDL Sbjct: 73 YIPTVGLDYQYVRRTNANR--KELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLDL 130 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGE---SRSGKQRVPRVLHKDYPDRELISP 182 SKP+ + E+ R Q+++ T E RS + + + +PD+ + Sbjct: 131 SKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQARFESHPDKNRVKI 190 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSS-------------K 229 P+ +++G K+D+F+ DSE RK + +TLR+LAH GASL F SS + Sbjct: 191 LPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSNTQIHVLFNQHNKR 250 Query: 230 SETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHA 289 + RS +N FG + ++ +P+ I D L+++G P + G + Sbjct: 251 NNDLFQNVRSIMNNALFGKTLAQYYQSEHLRPIEISLSKDELAKMGLPQIS----GNMTY 306 Query: 290 KNPFDLWKKVFEKVFPHESTRERKELKDPVK-DPQFSEPLIDSIRAQKDQELDQYKRE 346 + +KKV ++ FP + +DP++ +F E IDSIRA+KD+E+ +E Sbjct: 307 ---LEAFKKVIQETFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKE 361 >gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein light intermediate chain 2, partial [Equus caballus] Length = 490 Score = 287 bits (735), Expect = 9e-76, Method: Composition-based stats. Identities = 67/336 (19%), Positives = 116/336 (34%), Gaps = 48/336 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 31 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 78 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 79 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMS 138 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 139 RPWTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEPEEGCQGSPQRRGP 198 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 199 LTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRR 258 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA+LI TS K ++ I S PAG D+ +I Sbjct: 259 FCLQYGAALIDTSVKEAKSLDLKNKCIIHPTSNDPVTSPGKASQSLFAFRPAGWDNEKKI 318 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 319 A---ILHENFTTVKPEDVYEDFIVKPPVRKLVHDKE 351 >gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] gi|31376209|gb|AAO12154.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|33334344|gb|AAQ12259.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|47680185|gb|AAT37069.1| dynein 1b light intermediate chain [Chlamydomonas reinhardtii] gi|158276532|gb|EDP02304.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] Length = 427 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 98/371 (26%), Positives = 174/371 (46%), Gaps = 36/371 (9%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 +P + T I A + EE ++ A +F+GS+A GK+T+L RFL Sbjct: 7 LPGQAVKTPGSIWAKAIEH-----ANEERKKPGADGRGDAFCYFVGSRAAGKSTLLNRFL 61 Query: 61 --ERDETAKPTLALEYTFGRR-ARGHNTPKDIAHLWELGGGISLSDLV----QIPITADN 113 R E KP+ +EYT+ R+ A + KD+AH+WE+GG ++ + Q+ +TA Sbjct: 62 YPTRAEVPKPSEGIEYTYARKPAAFDHEKKDLAHIWEVGGSQEFAEEIVNSDQLFLTAKQ 121 Query: 114 VSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES--RSGKQRVPRVLH 171 V+ VV+V+DLS P + T+ + + ++ +K G +QR L+ Sbjct: 122 VTTAVVVIVVDLSDPAGVLPTLLYWVEQVKKKLGSTYEKFEKKGLQLPEQLRQRAKSKLY 181 Query: 172 KDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTS---- 227 D++ + + L+I +K+D F++ D E +KV+ + LR++AH +GA L + S Sbjct: 182 SANEDKDTVYHSGISLVIAATKYDAFKNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLHG 241 Query: 228 ------SKSETTMSKSRSFINQLAFGTERPKSI-----STDPSKPLAIPAGSDSLSQIGP 276 ++ + +N L F K + D + P+ +PAG D+ +G Sbjct: 242 ASEGSGAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSVGR 301 Query: 277 PVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVK---DPQFSEPLIDSIR 333 P + G W+++FEK+FP +E K K Q+ E +D++R Sbjct: 302 PRSQ----GEGTVAGGLAEWRELFEKMFPGVREKEAKMSAKGAKFVIPEQYKEEEVDAVR 357 Query: 334 AQKDQELDQYK 344 +K +L+ ++ Sbjct: 358 QRKVTDLENFR 368 >gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] Length = 433 Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 111/302 (36%), Gaps = 34/302 (11%) Query: 45 MGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDL 104 MG GKTT++ + L+ E LEY + + + W L G + L Sbjct: 1 MGEVGSGKTTLVAK-LQGVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGL 59 Query: 105 VQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE------ 158 + I+ +N+ ++ V+DLS+P ++++ R+ V+K+ + E Sbjct: 60 QKFAISLENLEDSLILFVVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLT 119 Query: 159 -----------------SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF---- 197 R + + + L +P+++V +K D Sbjct: 120 KQFQEYVEPGSDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLE 179 Query: 198 --QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 D+ E I +R YGA+L++TS K + ++ +G Sbjct: 180 KEHDYKDEHLDFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQ 239 Query: 256 TDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKE 314 + IP+G D+ +I + + A++ F D+ K + F HE + ++ Sbjct: 240 VVEKDSVFIPSGWDNEKKIA---ILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAED 296 Query: 315 LK 316 + Sbjct: 297 DQ 298 >gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella vectensis] gi|156225136|gb|EDO45956.1| predicted protein [Nematostella vectensis] Length = 422 Score = 267 bits (683), Expect = 1e-69, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 112/296 (37%), Gaps = 31/296 (10%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 + PS +++ +G+ GKTT++ + +++ LEYT+ Sbjct: 6 DVQSSASRKLPSHKSIILIGNDESGKTTLISKLRGKEDDISKGHGLEYTYLEVHDEEIDD 65 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 ++W L G L++ +T + + VV+V+D S+P A+ E++ S R + Sbjct: 66 YTRLNVWILDGDPRNKSLLKYALTPKHARDVLVVMVVDCSRPWAIMESLHSWTEILREHI 125 Query: 147 --------------EKVCAALQKTGESRSGKQRVPRVLHKDYPDR--------ELISPFP 184 EK+ Q ++ R D+ L+ Sbjct: 126 HSLKLSPKELNEMEEKIVQQFQDYTDTEEASDENRRRSGTKDEDKVVLPLEENVLVDNLG 185 Query: 185 VPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 +P++++ +K D +DF E I + +R +GA+L +TS K + Sbjct: 186 IPMIVLVTKTDCMLSLEKDRDFHDEHFDFIQQHIRRYCLKHGAALFYTSVKENKNCNLFL 245 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFD 294 ++ +G + IP+G DS+ +IG + +H + FD Sbjct: 246 KYVLHKIYGLPFKSPALVVDKDSVFIPSGWDSMKKIG---ILNEHLKNIHPDDSFD 298 >gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_a [Rattus norvegicus] Length = 455 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 105/336 (31%), Gaps = 85/336 (25%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 201 LTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQAHLRG 260 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 + IPAG D+ +I Sbjct: 261 FCLQ-------------------------------------FVEKDAVFIPAGWDNEKKI 283 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 284 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 316 >gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_b [Mus musculus] Length = 458 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 106/336 (31%), Gaps = 82/336 (24%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHK 172 +P + E+++ R ++K+ Q E G Q P+ Sbjct: 141 RPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSPQRRGP 200 Query: 173 ------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 D L +P+L+V +K D D+ E I LR Sbjct: 201 LTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQAHLRR 260 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 + + IPAG D+ +I Sbjct: 261 FCLQC-----------------ILGML-----------------KDAVFIPAGWDNEKKI 286 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + T+ ++ + D K + H+ Sbjct: 287 A---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 319 >gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974436|ref|XP_001184479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 483 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 66/352 (18%), Positives = 127/352 (36%), Gaps = 55/352 (15%) Query: 15 AEVRSRESRTDEEEAEE------------EDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 A+ S E D++E + + PS +++ +G GKTT+L R L+ Sbjct: 9 AKASSAEKENDDDEPQNLWTSILSEVSSHSSSKLPSCKSILVLGEDETGKTTLLSR-LQG 67 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + +W L G DL++ +TADN+ + V++ Sbjct: 68 VEDPKKGYGLEYLYLDVRDEDRDDTTRCGVWILAGENEHEDLLRYALTADNLEHMLVIIA 127 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQK-------------------TGESRSGK 163 +D+ +P + ++++ R V+ + +K TG+ S Sbjct: 128 VDMCRPWNIMDSLQKWTQVIRRHVDSLRIPPEKLRELEQRLVQQFQAYTEPETGQDSSVT 187 Query: 164 QRVPRVLHKDYPDRE-----------LISPFPVPLLIVGSKFDIF------QDFDSEKRK 206 +R V + E L VP+++V +K D QD+ E Sbjct: 188 RRTSGVTKPTGAEDEEAVVLPLGETTLTHNLGVPIVVVVTKSDYVNTLEKEQDYSDEHLD 247 Query: 207 VICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA 266 + + +R YGA+L + S K ++ + + L +P+ Sbjct: 248 FLQQNVRKFCLNYGAALFYVSVKENKNCDLLNRYLLHRLYDFPFNSAALVVEKDALFVPS 307 Query: 267 GSDSLSQIGPPVATEVDIGTLHAKNPFDL-WKKVFEKVFPHESTRERKELKD 317 G D+L ++ ++ + + P+D K + + +D Sbjct: 308 GWDNLQKVS---ILYENMANIDPEKPYDEVIIKPVVRRLLQ--DNKEIIAED 354 >gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain isoform 2 [Homo sapiens] gi|16740931|gb|AAH16324.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|119620695|gb|EAX00290.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_b [Homo sapiens] Length = 201 Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 98/177 (55%), Positives = 122/177 (68%), Gaps = 10/177 (5%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYP 175 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+P Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHP 169 >gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70865007|gb|EAN81375.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 286 Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 28/249 (11%) Query: 1 MPKVSSDTLWDIAAAEV-RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRF 59 MP+V+ D D+ + +RE++ + E V +G+ GKT++L R Sbjct: 50 MPQVTVDPTKDLWQNIILNTRENQVTQTEV-----------NVLIVGTSGSGKTSLLRRI 98 Query: 60 LERDETA-----------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIP 108 T+ KPT AL+Y+F RR H +AH WEL G+ LS L ++ Sbjct: 99 FSGVNTSSSSVPKSFLRVKPTTALDYSFVRRNDRHIA--QVAHFWELAQGMELSQLCEVV 156 Query: 109 ITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRV 166 IT +NV + + +V+D S+P+ +W+T+ + +V ++ ++ G + K R Sbjct: 157 ITPENVHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRA 216 Query: 167 PRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFT 226 R++ ++PD + VP +I+ +K D F + K + +++RF+AH YGA L+FT Sbjct: 217 KRLVGMEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFT 275 Query: 227 SSKSETTMS 235 S + Sbjct: 276 SDAEAIKLR 284 >gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] Length = 201 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 98/177 (55%), Positives = 123/177 (69%), Gaps = 10/177 (5%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE +KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPSKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYP 175 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+P Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHP 169 >gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, isoform A [Tribolium castaneum] Length = 475 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 54/306 (17%), Positives = 110/306 (35%), Gaps = 47/306 (15%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD 63 S LW ++V++ + PS + V +G GKTTI+ + L+ Sbjct: 11 DSKKNLWSQILSDVQNNGN-----------PKLPSCKQVLVLGDNECGKTTIVAK-LQGV 58 Query: 64 ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVL 123 E K LEY + + + +W L G +DL++ + + V+L + Sbjct: 59 EDPKKGSGLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHTDLLKFALNEETFQHTLVILTV 118 Query: 124 DLSKPNALWETMESLLGSARNQVEKVC--------------------AALQKTGESRSGK 163 ++ P ++ E ++ + ++K+ + S Sbjct: 119 TMTAPWSILEQLQHWASVLADHLDKLKLDVDLRQNRRQHIVKMWQEYVEPGDELDPASPM 178 Query: 164 QRVPRVL---------HKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVI 208 +R R P+ L + + +++V +K D D+ E + Sbjct: 179 KRSSRNFGDGEDGLEEQTSLPEGTLTNNLGLDIVVVVTKTDYIQTLEKEHDYRDEHLDFM 238 Query: 209 CKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 + +R YGA+L +TS+K + ++ +G + IPAG Sbjct: 239 QQWIRKFCLQYGAALFYTSAKEDKNCDLLYKYLTHRIYGFPFRTPALVVEKDAVFIPAGW 298 Query: 269 DSLSQI 274 D++++I Sbjct: 299 DNMNKI 304 >gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938-PA, isoform A [Apis mellifera] Length = 470 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 63/365 (17%), Positives = 126/365 (34%), Gaps = 64/365 (17%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 D LW AEV PS + + +G GKTT++ + L+ E Sbjct: 27 DNLWSSILAEV-----------QNSSSNKLPSNKNILVLGDNESGKTTLIAK-LQGVEDP 74 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LE+ + + + +W L G ++L++ + A+ V+LV ++ Sbjct: 75 KKGSGLEFAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLRFALNAERFPHTLVMLVAAMT 134 Query: 127 KPNALWETMESLLGSARNQVEKV--------------------CAALQKTGESRSGKQRV 166 P A+ + ++S + ++K+ + S +R Sbjct: 135 TPWAILDQLQSWAALLGDHIDKLPLDNDTWQRCRQLNVKKWQDYTEPGDELDPGSPLRRT 194 Query: 167 PRVLHKD------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 R L D P+ L + + +++V +K D D+ E I + +R Sbjct: 195 SRNLDDDTMDNLPLPEGVLTTNLGLDVVVVITKTDYMSTLEKEHDYKDEHFDFIQQWIRR 254 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 YGA L +TS+K + ++ + + IPAG D++ +I Sbjct: 255 FCLQYGAGLFYTSAKEDKNCDLLYKYLTHRIYSLPFRTPALVVEKDAVLIPAGWDNMKKI 314 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFE----------------KVFPHESTRERKELKD 317 ++ ++ + + D+ + + F + +KD Sbjct: 315 S---ILHENLQSMKPDDYYRDVIAQPSINRKCVAREVEVQAEEEQAFLAKQQAALLGVKD 371 Query: 318 PVKDP 322 P + P Sbjct: 372 PTRSP 376 >gi|123423641|ref|XP_001306418.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121887991|gb|EAX93488.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 286 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 75/328 (22%), Positives = 137/328 (41%), Gaps = 50/328 (15%) Query: 17 VRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTF 76 V + E E E + V F+G + GK++++ +F R ++ PTLAL Y Sbjct: 7 VNDLWGQIIEHETEPIKPYGAGDSHVLFVGGEQSGKSSLINQFFGRGDSTYPTLALAYQC 66 Query: 77 GRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETME 136 N + + H WELGGG+ + L+ T D +S V + DLSK ++ E++E Sbjct: 67 CNLKV--NGKEKVLHFWELGGGVQMESLIPTIATEDTISGFVVFVCFDLSKSASIIESLE 124 Query: 137 SLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDI 196 L +L D++ + + G+ +D+ Sbjct: 125 WL-----------------------------DILQMRLKDKQ------NAIFLAGTHYDL 149 Query: 197 FQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIST 256 F+ + +++I + LR +A + L+FTSSK ET +++ ++ I + + S Sbjct: 150 FESKSPQDKEIIVQGLRSIAAEHKVGLVFTSSKMETLINRFKNVIKYVCIANSNVREKSV 209 Query: 257 DPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELK 316 D P+ + G+D+ Q + D+ K+ ++ + + LK Sbjct: 210 DFFNPVIVGPGADTELQ-------------TSGQEVADMMNKLSAEIAIEKRDKSSNSLK 256 Query: 317 DPVKDPQFSEPLIDSIRAQKDQELDQYK 344 + + DP +E IDS+ K EL+ K Sbjct: 257 NVITDPGLAEEDIDSLYLAKKAELNSKK 284 >gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosophila melanogaster] gi|24641224|ref|NP_727500.1| Dlic2 CG1938-PC, isoform C [Drosophila melanogaster] gi|24641226|ref|NP_727501.1| Dlic2 CG1938-PD, isoform D [Drosophila melanogaster] gi|16182605|gb|AAL13531.1| GH06357p [Drosophila melanogaster] gi|22832089|gb|AAF48011.2| CG1938-PA, isoform A [Drosophila melanogaster] gi|22832090|gb|AAN09288.1| CG1938-PC, isoform C [Drosophila melanogaster] gi|22832091|gb|AAN09289.1| CG1938-PD, isoform D [Drosophila melanogaster] Length = 493 Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 69/365 (18%), Positives = 129/365 (35%), Gaps = 53/365 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 + LW EV+++ S PS ++V +G A GKTT++ + L+ E Sbjct: 28 ENLWSAILNEVQTQGS-----------TKLPSNKSVLVLGDNATGKTTLIAK-LQGVEDP 75 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + + +W L G ++L+ + N + V+L + ++ Sbjct: 76 KKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMT 135 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKT--------------------GESRSGKQRV 166 +P E + + ++ + ++ + S +R Sbjct: 136 QPWGWLEQLNHWIKVLGQHIDSLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRT 195 Query: 167 PRVLHKDYPDR------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 R D D LI+ + +++V +K D ++ E I + +R Sbjct: 196 MRNNSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRN 255 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 +G SL +TS K + ++ +G + IPAG DSL +I Sbjct: 256 FCLRHGTSLFYTSVKEDKNCDVLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLKKI 315 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIR 333 ++ + A+NP+ D+ K + E + +D Q I Sbjct: 316 S---ILYENMHGVKAENPYTDIIKSPPTRKAVSNREAEVQ-----TEDEQAFLARQQEIL 367 Query: 334 AQKDQ 338 Q DQ Sbjct: 368 KQGDQ 372 >gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00000001598 [Nasonia vitripennis] Length = 486 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 64/354 (18%), Positives = 125/354 (35%), Gaps = 57/354 (16%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 D LW A+V + PS + V +G GKTT++ + L+ E Sbjct: 28 DNLWSSILAQV-----------QNSSNNKLPSNKNVLVLGDNESGKTTLIAK-LQGVEDP 75 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + + + +W L G ++L++ + A V+LV ++ Sbjct: 76 KKGSGLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLKFALNAKRFPNTLVMLVAAMT 135 Query: 127 KPNALWETMESLLGSARNQVEK------------------VCAALQKTGESR------SG 162 P AL + ++ + ++K + Q E S Sbjct: 136 TPWALLDQLQFWSRVLGDHIDKLASDNDDFKQTWQDCRQQIKKKWQDYTEPGDDLDPGSP 195 Query: 163 KQRVPRVLHKD------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 +R R L + PD L + + +++V +K D D+ E + + Sbjct: 196 LRRTSRNLDDESVDNLPLPDGVLTTNLGLDIVVVITKTDYMSTLEKEHDYRDEHFDFMQQ 255 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA L +TS K + ++ + + IPAG D+ Sbjct: 256 WIRRFCLQYGAGLFYTSVKEDKNCDLLYKYLTHRIYSLPFRTPALVVEKDAVLIPAGWDN 315 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQ 323 + +I ++ ++ + + D+ K P +++++ +D Q Sbjct: 316 MKKIS---ILHENLQSMKPDDYYRDVIVKP-----PSNRKSVQRQVEVQTEDEQ 361 >gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoobscura] gi|54643019|gb|EAL31763.1| GA15140-PA [Drosophila pseudoobscura] Length = 499 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 63/336 (18%), Positives = 120/336 (35%), Gaps = 48/336 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 + LW EV+++ S P+ ++V +G A GKTT++ + L+ E Sbjct: 30 ENLWSAILNEVQTQGS-----------TKLPANKSVLVLGDNATGKTTLIAK-LQGVEDP 77 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + + +W L G ++L+ + N + V+L + ++ Sbjct: 78 KKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHFALNETNYAHTLVILTVSMT 137 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKTGESR--------------------SGKQRV 166 +P E + + +E + + +R S +R Sbjct: 138 QPWGWLEQLNHWIKVLGQHIESLPLEAKDKEMARQRLATTWQSYCEVGDDLDPGSPVKRT 197 Query: 167 PRVLHKDYPDR------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 R D D LI+ + +++V +K D ++ E I + +R Sbjct: 198 MRNNSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRS 257 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 GASL +TS K + ++ +G + IPAG DSL +I Sbjct: 258 FCLRTGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLKKI 317 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 ++ + A++P+ D+ K + Sbjct: 318 S---ILYENMHGIKAESPYSDVIKAPPTRKAVSNRE 350 >gi|123415018|ref|XP_001304608.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121886072|gb|EAX91678.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 287 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 72/343 (20%), Positives = 128/343 (37%), Gaps = 68/343 (19%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 D DI A + E+A + ++ F+GS+ GK+ + +F R + Sbjct: 3 VDPKRDIWGALIN--------EKASSLKSGVNEEKHFLFVGSEKSGKSCLQNQFFSRRDE 54 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 TLAL Y + + + H WE+G G L L+ +T + + + + ++ Sbjct: 55 PPETLALSYQSASV--RQDDKEVVLHFWEIGSGTKLDQLINTIVTKETLKDFNAFICFNV 112 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPV 185 +KP+++ + A N + K Q Sbjct: 113 NKPSSILTA----IDWAENLISKFAYKSQ------------------------------- 137 Query: 186 PLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLA 245 + +G+ +D F+ D ++ + LR +A Y A LIFTS K + ++ + I QLA Sbjct: 138 SIYFIGTFYDTFESNDPSQKINTVQGLRAIASKYHAGLIFTSYKDDNLANRFKGLIRQLA 197 Query: 246 FGTERPKSISTDPSKPLAIPAGSDSL---SQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 G I T P+ I SD ++I P ++ K Sbjct: 198 LGETPTGEIITQHISPVFILPDSDKECGGNEIISPYVRQL-------------------K 238 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKR 345 P + + DP +F+E ID + K++EL++ R Sbjct: 239 SAPPDDDAQAASKDDPTSS-KFAEKEIDELAETKERELEEKLR 280 >gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT00019900001 [Paramecium tetraurelia strain d4-2] gi|124421326|emb|CAK86207.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 31/305 (10%) Query: 39 QRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 Q + F G GK+TI+ + ++ + L YT ++ + + +E+ G Sbjct: 21 QHSFVFCGQTQSGKSTIVSKLTS--QSIQEQAGLIYT--QQKTNIIGYQAVLQYFEVSG- 75 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLS-KPNALWETMESLLGSARNQVEKVCAALQKTG 157 + L+ +P+ + S +LV+DLS P+ + + + + + EK LQ++ Sbjct: 76 QAFKQLLTLPLNKQSYQQYSYILVIDLSDNPHEILNVCNTEIRYIKEETEK---KLQQSI 132 Query: 158 ESRSGKQRVPRVLHK--DYPDRELISPFPVPLLIVGSKFDIF-QDFDSEKRKVICKTLRF 214 + + KQ + K + D+ I P VP++IVG K+D+F ++ D E RK I + LR+ Sbjct: 133 DVDTFKQLELNIYDKIMMHHDKNRIIPSYVPIIIVGWKYDLFSKNLDQESRKWITRGLRY 192 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI-STDPSKPLAIPAGSDSLSQ 273 LAH SL+F S++ + ++ L + + I D K L I SDS+ Sbjct: 193 LAHSNNCSLVFGSNQDYQLVKQT------LQYNVKPSAPIYQFDHLKQLCITQLSDSIEN 246 Query: 274 IGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDP---QFSEPLID 330 I P + NP D + K+ + ++K+ + + + + E ID Sbjct: 247 INLPPS---------GNNPLDGFNKIIKDQIVAVVNNQKKKKQSKISEEDWDNYKEEKID 297 Query: 331 SIRAQ 335 + Q Sbjct: 298 RLIKQ 302 >gi|157128066|ref|XP_001661298.1| dynein light intermediate chain [Aedes aegypti] gi|108872707|gb|EAT36932.1| dynein light intermediate chain [Aedes aegypti] Length = 494 Score = 219 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 57/331 (17%), Positives = 121/331 (36%), Gaps = 49/331 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 + LW +EV++ + PS ++V +G A GKTT++ + L+ E Sbjct: 29 ENLWSAILSEVQT-----------QSSTKLPSNKSVLVLGDNASGKTTLIAK-LQGVEDP 76 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + + +W L G ++L++ + N + V+L L ++ Sbjct: 77 KKGSGLEYAYIDVRDEYRDDVTRLGVWILDGDPGHTNLLKYALNETNYAHTLVILTLSMT 136 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQK--------------------TGESRSGKQRV 166 P + + +E + + + + ++ + S +R Sbjct: 137 TPWSWVDQLEHWIKMLDDHIAGLKIDPEERQQCRQRLVTVWQSYCDTIDELDPGSPIKRT 196 Query: 167 PRVLHKD-------YPDRELISPFPVPLLIVGSKFDIFQ------DFDSEKRKVICKTLR 213 R+ D P+ L + + +++V +K D D+ E + + +R Sbjct: 197 NRLSSVDDDLDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQWIR 256 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 YGASL +TS K + ++ +G + IPAG D++ + Sbjct: 257 RFCLVYGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRTPALIVEKDAVLIPAGWDNMKK 316 Query: 274 IGPPVATEVDIGTLHAKNPF-DLWKKVFEKV 303 I ++ + + + D+ + + Sbjct: 317 IN---ILYENMQSCKPDDYYNDIIAQPPSRK 344 >gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT00009430001 [Paramecium tetraurelia strain d4-2] gi|124407696|emb|CAK73082.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 73/305 (23%), Positives = 133/305 (43%), Gaps = 31/305 (10%) Query: 39 QRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 Q + G GK+TI+ + + + L Y ++ + + +E+ G Sbjct: 21 QHSFVLCGQPQSGKSTIVSKLTS--QQIQDQAGLIY--AQQKTNIIGYQAVLQYFEISG- 75 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLS-KPNALWETMESLLGSARNQVEKVCAALQKTG 157 + L+ +P+ + S VLV+DLS P+ + + + R + EK LQ++ Sbjct: 76 QAFKQLLTLPLNKQSYQQYSYVLVIDLSDNPHEILNVCNAEIRYIREETEK---KLQQSI 132 Query: 158 ESRSGKQRVPRVLHK--DYPDRELISPFPVPLLIVGSKFDIF-QDFDSEKRKVICKTLRF 214 + + KQ + K + D+ I P VP++IVG K+D+F ++ D E RK I + LR+ Sbjct: 133 DVDTFKQLELNIYDKIMMHHDKNRIVPLYVPIIIVGWKYDLFSKNLDLESRKWITRGLRY 192 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI-STDPSKPLAIPAGSDSLSQ 273 LAH SL+F S++ + ++ L + + SI D K + I SDS+ Sbjct: 193 LAHTNNCSLVFGSNQDYQFVRQT------LQYHVKPTASIYQYDHLKQICITQLSDSIEN 246 Query: 274 IGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDP---QFSEPLID 330 I P + NP D + K+ + ++K+ + + + + E ID Sbjct: 247 INLPPS---------GNNPLDGFNKIIKDQIVAVVNNQKKKKQSKITEEDWNNYKEEKID 297 Query: 331 SIRAQ 335 + Q Sbjct: 298 RLIKQ 302 >gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae str. PEST] gi|157018577|gb|EAA06916.4| AGAP000723-PA [Anopheles gambiae str. PEST] Length = 470 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 54/319 (16%), Positives = 114/319 (35%), Gaps = 38/319 (11%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E + + PS ++V +G A GKTT++ + L+ E K LEY + + Sbjct: 6 EVQTQSNTKLPSNKSVLVLGDNASGKTTLIAK-LQGVEDPKKGSGLEYAYIDVRDEYRDD 64 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 +W L G ++L++ + N V+L L ++ P + + ++ + + + Sbjct: 65 VTRLSVWILDGDPGHNNLLKFALNEQNFPHTLVILTLSMTTPWSWVDQLQHWMKILDDHI 124 Query: 147 EKVCAALQKT-----------------------GESRSGKQRVPRVLHK----DYPDREL 179 + ++ G R+P V + P+ L Sbjct: 125 AGLKIDPEEKQQCQARLTTEWQNYCETIDDLDPGSPIKRTNRLPSVDDELDALPLPEGVL 184 Query: 180 ISPFPVPLLIVGSKFDIFQ------DFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 + + +++V +K D D+ E + + +R YGASL +TS K + Sbjct: 185 TTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQWIRRFCLMYGASLFYTSVKEDKN 244 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 ++ +G + IPAG D++ +I ++ + + + Sbjct: 245 CDLLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDNMKKIS---ILYENMQSCKPDDYY 301 Query: 294 -DLWKKVFEKVFPHESTRE 311 D+ + + E Sbjct: 302 NDIIAQPPSRKTVSNRESE 320 >gi|119584836|gb|EAW64432.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_b [Homo sapiens] Length = 224 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 80/217 (36%), Gaps = 36/217 (16%) Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------S 161 +LV+D+SKP ++++ R V+K+ ++ + + Sbjct: 1 MLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPA 60 Query: 162 GKQRVPRVLHKDYPD--------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKV 207 QR +D D L +P+L+V +K D D+ E Sbjct: 61 SPQRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDF 120 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 I +R YGA+LI+TS K + +I Q +G + IPAG Sbjct: 121 IQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAG 180 Query: 268 SDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKV 303 D+ +IG + TL A++ F D+ K + Sbjct: 181 WDNDKKIG---ILHENFQTLKAEDNFEDIITKPPVRK 214 >gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 134 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 72/134 (53%), Positives = 95/134 (70%), Gaps = 1/134 (0%) Query: 224 IFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVD 283 +FT SKSE + K R INQLAFG ++ KS+ D +KPL I AG DSL QIG P + D Sbjct: 1 MFT-SKSEALLLKMRGVINQLAFGIDKSKSMCVDQNKPLFITAGLDSLCQIGSPPVPDSD 59 Query: 284 IGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQY 343 IG L A +P +LWKKV+EK+FP +ST K ++DP +DPQ++E +D +R QKDQEL+QY Sbjct: 60 IGKLQAHSPMELWKKVYEKLFPPKSTSTLKAIQDPARDPQYAESEVDEMRVQKDQELEQY 119 Query: 344 KREQAKSWKSLALD 357 KR +K+WK + LD Sbjct: 120 KRSSSKTWKQIELD 133 >gi|115690607|ref|XP_001202918.1| PREDICTED: similar to Dynein, cytoplasmic 2, light intermediate chain 1, partial [Strongylocentrotus purpuratus] gi|115733494|ref|XP_788980.2| PREDICTED: similar to Dynein, cytoplasmic 2, light intermediate chain 1, partial [Strongylocentrotus purpuratus] Length = 170 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 74/171 (43%), Positives = 108/171 (63%), Gaps = 5/171 (2%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 ++WDIA E + + +E+ E S+ + F+GSK GKT+I+LRFLE++E Sbjct: 3 KSIWDIAILEAEQKHATESKEQGGEAKG---SENHILFIGSKNAGKTSIILRFLEKEEAP 59 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 KPT+ALEYTFGRRA+GHN KDI H+WELGGG LS L +IP++ D + S+++V+DLS Sbjct: 60 KPTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDLS 119 Query: 127 KPNALWETMESLLGSARNQVEKVCAAL--QKTGESRSGKQRVPRVLHKDYP 175 +P LW TME+L+ A + VE+V + K+R + + D+P Sbjct: 120 QPYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHP 170 >gi|157863075|gb|ABV90642.1| cytoplasmic dynein light intermediate chain [Tetrahymena thermophila] Length = 457 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 52/285 (18%), Positives = 112/285 (39%), Gaps = 52/285 (18%) Query: 39 QRTVFFMGSKAGGKTTILLRFLERDETAKPTL-----------------ALEYTFGRRAR 81 + V +G++ GK T++ E +T P + AL+Y + Sbjct: 28 NKQVLVLGTRGTGKRTLIDSLHEISQTIYPKIRSNEMQSGKLRIAGSVSALDYVYLNVKN 87 Query: 82 GHNTPKDI---AHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESL 138 + +D + + S L+ I + + V + ++LDLS+P E ++ Sbjct: 88 LDDQDEDTMAKLGFYIIDEETQ-SQLLPIVLKQNTVKDTLITIMLDLSEPWTFMEQLDKW 146 Query: 139 LGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD------------------------- 173 + N ++ + L+ + R+ +++ R + Sbjct: 147 IEMITNHLQSLQINLETLDQMRAKVEKLFRDYKEPVLDSDGKLVKSDTQISPEEEAELIK 206 Query: 174 ------YPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTS 227 P+ L S +P++I+ +K D+ + ++ +++ LR YGASL+FTS Sbjct: 207 LKSSVPLPEGSLTSNLGIPIVILANKSDLIAQSNDQQSQIVLYYLRKYCLQYGASLVFTS 266 Query: 228 SKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 SK++ ++ ++ +G + + IP+GSD+L+ Sbjct: 267 SKNQESLEIYYEYMLHTLYGFKNKNKSEIYTIDSIFIPSGSDNLN 311 >gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] Length = 209 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 12/154 (7%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +LW +EV +R + PS + + G GKTT++ + L+ E Sbjct: 33 QSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTK-LQGAEHG 80 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + ++W L G + L++ ++A+++ V+ V D+S Sbjct: 81 KKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMS 140 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKTGESR 160 +P + E+++ R ++K+ +K E Sbjct: 141 RPWTVMESLQKWASVLREHIDKMKIPPEKMRELE 174 >gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 446 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 71/194 (36%), Gaps = 22/194 (11%) Query: 135 MESLLGSARNQVEKVCAALQKTGESRSG----KQRVPRVLHKDYPD--------RELISP 182 +E L + ++ V Q+ E QR +D D L Sbjct: 99 LEYLYLNVHDEDRDVIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVLPLGADTLTHN 158 Query: 183 FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSK 236 +P+L+V +K D D+ E I +R YGA+LI+TS K + Sbjct: 159 LGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDL 218 Query: 237 SRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DL 295 +I Q +G + IPAG D+ +IG + TL A++ F D+ Sbjct: 219 VYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG---ILHENFQTLKAEDNFEDI 275 Query: 296 WKKVFEKVFPHEST 309 K + F HE Sbjct: 276 ITKPPVRKFVHEKE 289 >gi|146164455|ref|XP_001013126.2| Ras family protein [Tetrahymena thermophila SB210] gi|146145792|gb|EAR92881.2| Ras family protein [Tetrahymena thermophila SB210] Length = 681 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 53/288 (18%), Positives = 109/288 (37%), Gaps = 55/288 (19%) Query: 39 QRTVFFMGSKAGGKTTILLRFLERDETAKPTL-----------------ALEYTFGRRAR 81 + V +G++ GK T++ E +T P + AL+Y + Sbjct: 28 NKQVLVLGTRGTGKRTLIDSLHEISQTIYPKIRSNEMQSGKLRIAGSVSALDYVYLNVKN 87 Query: 82 GHNTPKDI---AHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESL 138 + +D + + S L+ I + + V + ++LDLS+P E ++ Sbjct: 88 LDDQDEDTMAKLGFYIIDEETQ-SQLLPIVLKQNTVKDTLITIMLDLSEPWTFMEQLDKW 146 Query: 139 LGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD-----------------YPDRELIS 181 + N ++ + L+ + R+ +++ R + + ELI Sbjct: 147 IEMITNHLQSLQINLETLDQMRAKVEKLFRDYKEPVLDSDGKLVKSDTQISPEEEAELIK 206 Query: 182 P-FPVPL----------------LIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLI 224 VPL + K D+ + ++ +++ LR YGASL+ Sbjct: 207 LKSSVPLPEGSLTSNLVYKETYRFLNQIKSDLIAQSNDQQSQIVLYYLRKYCLQYGASLV 266 Query: 225 FTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 FTSSK++ ++ ++ +G + + IP+GSD+L+ Sbjct: 267 FTSSKNQESLEIYYEYMLHTLYGFKNKNKSEIYTIDSIFIPSGSDNLN 314 >gi|26252194|gb|AAH40558.1| DYNC2LI1 protein [Homo sapiens] Length = 144 Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 70/115 (60%), Positives = 83/115 (72%), Gaps = 8/115 (6%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVS 115 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLR 107 >gi|158602493|gb|EDP38908.1| dynein light intermediate chain, putative [Brugia malayi] Length = 469 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 114/324 (35%), Gaps = 60/324 (18%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 + +W +EV + + T+ F+G++ GK+ +L R LE+ ET Sbjct: 26 DERIWTQILSEVSANGMSNS------------APGTILFLGNRQSGKSWLLNR-LEKRET 72 Query: 66 AKPTLALEYTFGRRARGHNTPK-----------------DIAHLWELGGGISLSDLVQIP 108 + ALEY F + +W L G ++ + LV+ Sbjct: 73 SGRGSALEYHFLNVHTDYRDVSYAYQLASAGAGVAPGESVTLPVWVLDGDVAFAPLVKFA 132 Query: 109 ITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL-------------QK 155 +TA +S V+L + +P A+ ++ + +Q+E + Q+ Sbjct: 133 LTA-PLSKSIVILCASMQEPGAVLPSLNKWVKVISDQIENIFDKATVIDARKSQELFWQE 191 Query: 156 TGE-------------SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQD-FD 201 E + R V+ L L++V +K D+ + Sbjct: 192 YVEPLDSSMQSDKIPSMETEHVRSHFVVLLPLEQNILTRNTGAALVVVLTKSDLAHNEMS 251 Query: 202 SEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKP 261 E+ + +R +GA+L++TS+K E + ++ G Sbjct: 252 DEQLDRLQYHVRKFCMAHGAALVYTSAKEEKNTALLYKYVVHRVCGMPFTTPAQVVDKDS 311 Query: 262 LAIPAGSDSLSQ--IGPPVATEVD 283 + +PAG D+ + I +VD Sbjct: 312 VFVPAGWDNEKKLDIIKEAIPDVD 335 >gi|57092883|ref|XP_531798.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 2 isoform 1 [Canis familiaris] Length = 107 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 71/118 (60%), Positives = 86/118 (72%), Gaps = 11/118 (9%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R S D E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGSEGDGLE--------IGEKSVFFIGSKNGGKTTIILRCL 49 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLS 118 +RDE KPTLALEYT+GRRA+GHN PKDIAH WELGGG SL DL+ IPIT+DN+ ++ Sbjct: 50 DRDEPPKPTLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTVN 107 >gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosophila melanogaster] gi|22832093|gb|AAN09291.1| CG1938-PB, isoform B [Drosophila melanogaster] Length = 398 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 96/284 (33%), Gaps = 41/284 (14%) Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W L G ++L+ + N + V+L + +++P E + + ++ Sbjct: 2 TRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQPWGWLEQLNHWIKVLGQHID 61 Query: 148 KVCAALQKT--------------------GESRSGKQRVPRVLHKDYPDR------ELIS 181 + ++ + S +R R D D LI+ Sbjct: 62 SLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLLPLTEDALIT 121 Query: 182 PFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMS 235 + +++V +K D ++ E I + +R +G SL +TS K + Sbjct: 122 NLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLRHGTSLFYTSVKEDKNCD 181 Query: 236 KSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-D 294 ++ +G + IPAG DSL +I ++ + A+NP+ D Sbjct: 182 VLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLKKIS---ILYENMHGVKAENPYTD 238 Query: 295 LWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQ 338 + K + E + +D Q I Q DQ Sbjct: 239 IIKSPPTRKAVSNREAEVQ-----TEDEQAFLARQQEILKQGDQ 277 >gi|158290784|ref|XP_312349.4| AGAP002589-PA [Anopheles gambiae str. PEST] gi|157018063|gb|EAA07717.5| AGAP002589-PA [Anopheles gambiae str. PEST] Length = 239 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 75/213 (35%), Gaps = 26/213 (12%) Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W L L+ L++ + + ++L L ++ P + ++ + N + Sbjct: 20 ARLSIWTLAADPELNGLLKFALNERSFPHTLILLTLSMAAPWNWMDQLQYWMKVLDNHIG 79 Query: 148 KVCAALQKTGE--------------------SRSGKQRVPRVLHKDYPDRELISPFPVPL 187 + + + S +R ++ D L S + + Sbjct: 80 GLEIDAELKHQCMARLMAKWQSYSDLGSDPLRNSPCKRSNELVPLPLEDAVLTSNLGMEV 139 Query: 188 LIVGSKFDIFQ------DFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFI 241 ++V + D ++ E + + +R YGASL++T+ K+ ++ Sbjct: 140 IVVVKRSDQMATLRRELNYREEHFDFMQQAIRRAGLQYGASLVYTTVKNNINCDLLLQYL 199 Query: 242 NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 +G S S + +PAG DS+ +I Sbjct: 200 KHRIYGLPFGTSASVVEKDAVFVPAGWDSVQKI 232 >gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Dictyostelium discoideum AX4] gi|60462801|gb|EAL61001.1| dynein light intermediate chain [Dictyostelium discoideum AX4] Length = 504 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 63/311 (20%), Positives = 111/311 (35%), Gaps = 66/311 (21%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE-TAKPTLALEYTFGRRARGH--NTP 86 ++ +R V +G GK+ +L +F + ++AL YTF P Sbjct: 19 SSNKNNYFEKRDVAILGDPTSGKSLLLSKFDTVSNVESLKSIALSYTFSDIYEDDTSEDP 78 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 + W L G S +DL++ + +N+ V++ LD S+P L E+++ LG + Sbjct: 79 VGRINYWSLEGEASQNDLLKFSLNKENIKNCMVIITLDFSQPWNLVESLKKWLGILEEHI 138 Query: 147 ---------------EKVCAALQKTGES-------------------------RSGKQRV 166 +K+ + E + K + Sbjct: 139 KSIFKDDKNGFKNLQDKLSIKWHEYEEPTTTAATTTTTTTSNNIENNTNKTSPTTDKIQT 198 Query: 167 PRV-----------------LHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSE 203 V + + LI+ VP+L+ K D D+ E Sbjct: 199 NNVQKKKKKKVNISSAEDASVLPPLSENILINNLGVPILVACCKSDSVVMLEKDFDYKDE 258 Query: 204 KRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 I + LR + YGA LI+TS++ E + +I + FG E + Sbjct: 259 LFDYIQQYLRRICLQYGAGLIYTSARKEINCGVTLEYIENILFGFELKSKTQLIEKDQIF 318 Query: 264 IPAGSDSLSQI 274 +PAG D+L++I Sbjct: 319 VPAGWDTLAKI 329 >gi|123390419|ref|XP_001299882.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121880822|gb|EAX86952.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 192 Score = 147 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 50/225 (22%), Positives = 92/225 (40%), Gaps = 45/225 (20%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +GS GKTT+++++ + E TL +++ R+ NTP +I +W++GG Sbjct: 10 IALIGSSMVGKTTLMVKYCKGTFSEDYIATLGVQFL-ERQITVKNTPVNIV-IWDIGGQK 67 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 S D++ P+ D ++ + DLS +L AL+ +S Sbjct: 68 SFMDML--PVCCDGAH--VLIFMFDLSNITSL-------------------TALRDWYKS 104 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 RV +VG+KFD++ + E++ I + A Sbjct: 105 AYDCNPSARVF------------------LVGNKFDLYFEQTEEEKIAITNKAKKFAQAI 146 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 GA L++ S+ + K I FG + +DP++P+ I Sbjct: 147 GAPLMYCSNTHSINVKKLFQLIIAQVFGLDPRIEQCSDPNEPIVI 191 >gi|158597036|gb|EDP35273.1| dynein 2 light intermediate chain, putative [Brugia malayi] Length = 140 Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 1/122 (0%) Query: 230 SETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHA 289 E +SK+R I+ + FGT K+I TD +KPL++P G+DSL IG P + + A Sbjct: 1 MENLISKTRVLISSVVFGTTASKTICTDHNKPLSVPCGADSLMDIGAPPFINSSLSLIGA 60 Query: 290 KNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAK 349 NP DLW + + + FP++ +E +P +D Q EP ID + Q+ +EL+QY R + Sbjct: 61 TNPRDLWYEAYLEHFPNKEKHNERE-DNPAEDGQHKEPEIDELIEQRTRELEQYIRHKKD 119 Query: 350 SW 351 Sbjct: 120 RA 121 >gi|125858836|gb|AAI29880.1| Dync1li1 protein [Mus musculus] Length = 141 Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 45/116 (38%) Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 K LEY + + ++W L G + L++ + A ++ V+ Sbjct: 2 SVAAEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVM 61 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD 176 LV+D+SKP ++++ R V+K+ ++ E R + + D Sbjct: 62 LVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGED 117 >gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT00034450001 [Paramecium tetraurelia strain d4-2] gi|124399480|emb|CAK64972.1| unnamed protein product [Paramecium tetraurelia] Length = 425 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 48/281 (17%), Positives = 109/281 (38%), Gaps = 25/281 (8%) Query: 18 RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLA------ 71 +E+ ++ E+ + + +G K GK ++L + +T K + Sbjct: 2 SKKENVWNQLLFEKSRQGGFINKNLLILGRKCSGKRSLLDALADVTKTLKNGIRQKGITP 61 Query: 72 -LEYTFGRRARGHNTPKD---IAHLWELG--GGISLSDLVQIPITADNVSFLSVVLVLDL 125 ++Y + + + +++ L G L+ + N+ VV+ LD+ Sbjct: 62 IVDYAYLNLIDLRDPDYNTNARLNVYILEEEGQKY---LLPQILNHKNIKNTFVVIALDM 118 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRS--GKQRVPRVLHKDYPDRELISPF 183 +P E ++ +G ++ + + +L + E +S + + + Sbjct: 119 QEPWTFMEDLDRWIGVLQDMMADLRLSLNELEEMKSNVMQYMSQMDGGQAHEGLLKT-NL 177 Query: 184 PVPLLIVGSKFDIFQDFD-----SEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 +PL+++ +K DI + D +K ++I LR YGA+L+FTS K + + Sbjct: 178 GIPLMVMVNKSDILERDDKGKDWDQKAEIIQFCLRQFCVNYGATLLFTSVKQKINIKVMY 237 Query: 239 SFINQLAFGTER--PKSISTDPSKPLAIPAGSDSLSQIGPP 277 ++ + + + + L IP G D ++ I Sbjct: 238 EYVLHRLYNMPFETSQHKNLSDFESLFIPLGQDDINIIKST 278 >gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT00031450001 [Paramecium tetraurelia strain d4-2] gi|124395704|emb|CAK61219.1| unnamed protein product [Paramecium tetraurelia] Length = 435 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 49/281 (17%), Positives = 108/281 (38%), Gaps = 25/281 (8%) Query: 18 RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKP-------TL 70 +E+ ++ E+ + + +G K GK ++L E +T K T Sbjct: 2 SKKENVWNQLLFEKSRQGGFINKNLVILGRKCSGKRSLLDSLAEITKTHKNAIRQKGITP 61 Query: 71 ALEYTFGRRARGHNTPKD---IAHLWELG--GGISLSDLVQIPITADNVSFLSVVLVLDL 125 ++Y F + + +++ L G L+ + N+ VV+ LD+ Sbjct: 62 IVDYAFLNLIDLRDPDYNTNARLNVYILEEEGQKY---LLPQILNHKNIKNTFVVIALDM 118 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRS--GKQRVPRVLHKDYPDRELISPF 183 +P E ++ + ++ + + +L + E ++ + + + Sbjct: 119 QEPWTFMEDLDRWISVLQDMMADLRLSLNELEEMKANVMQYMSQMDGGQAHEGLLKT-NL 177 Query: 184 PVPLLIVGSKFDIFQDFD-----SEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 +PL+++ +K DI + D +K ++I LR YGA+L+FTS K + + Sbjct: 178 GIPLMVMVNKSDILERDDKGKDWDQKAEIIQFCLRQFCVNYGATLLFTSVKQKINIKVMY 237 Query: 239 SFINQLAFGTER--PKSISTDPSKPLAIPAGSDSLSQIGPP 277 ++ + + + + L IP G D ++ I Sbjct: 238 EYVLHRLYNMPFETSQHKNLSDFESLFIPLGQDDINIIKST 278 >gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] gi|21615437|emb|CAC42262.2| Hypothetical protein C39E9.14b [Caenorhabditis elegans] gi|21684779|emb|CAD37351.1| Hypothetical protein C39E9.14b [Caenorhabditis elegans] Length = 441 Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats. Identities = 71/322 (22%), Positives = 122/322 (37%), Gaps = 54/322 (16%) Query: 1 MPKVSSDTLW--DIAAAEVRSRESRTDEEEA------EEEDAHFPSQRTVFFMGSKAGGK 52 MP ++ L D A A + S TDEE + + TV +G GK Sbjct: 1 MPP-TAQPLEFDDTANAVLPVLYSSTDEEVGIWRELLASKKTNTNQGSTVIVLGDNRSGK 59 Query: 53 TTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELG-GGISL--SDLVQIPI 109 +++L R + D T KP L Y R N +D ++ ++LG G +L S+L+QIP+ Sbjct: 60 SSLLSRLDKSDRTVKPKSLLGY---RVLHVQNDARDASYAYQLGTAGANLNPSELLQIPV 116 Query: 110 --------TADNVSFLS------VVLVLDLS--KPNALWETMESLLGSARNQVEKVCAAL 153 A + + +L S PN L +++ Q +K Sbjct: 117 WSLDGNAACASLLKHALPATPAEAIFILTASIDNPN-LIHSLKRWANVCTEQAQKHFTK- 174 Query: 154 QKTGESRSGKQRVPRVL---------------------HKDYPDRELISPFPVPLLIVGS 192 + RS ++++ + L V ++V + Sbjct: 175 EDLKAGRSQQEKMWQEYVDPVQSQMSTSVVGSFADEHNLLPLDQGTLTENCGVTFMVVIT 234 Query: 193 KFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 K D+ ++F + I LR GA+L+FTS+K + + +I +FGT Sbjct: 235 KSDLGKEFTDAQFAKISIQLRKFCLSLGATLVFTSAKETKNIQLLQKYIVHRSFGTAFTS 294 Query: 253 SISTDPSKPLAIPAGSDSLSQI 274 + + + +PAG D +I Sbjct: 295 AAQVIERESIFVPAGWDGEKKI 316 >gi|2618484|dbj|BAA23371.1| dynein light intermediate chain 53/55 [Rattus norvegicus] Length = 268 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 4/113 (3%) Query: 198 QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTD 257 D+ E I LR YGA+LI+TS K E + +I +G Sbjct: 1 HDYRDEHLDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVV 60 Query: 258 PSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + IPAG D+ +I + T+ ++ + D K + H+ Sbjct: 61 EKDAVFIPAGWDNEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 110 >gi|2618480|dbj|BAA23369.1| dynein light intermediate chain 53/55 [Rattus norvegicus] Length = 254 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 49/134 (36%), Gaps = 12/134 (8%) Query: 198 QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTD 257 D+ E I LR YGA+LI+TS K E + +I +G Sbjct: 1 HDYRDEHLDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVV 60 Query: 258 PSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST--RER-- 312 + IPAG D+ +I + T+ ++ + D K + H+ E Sbjct: 61 EKDAVFIPAGWDNEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 117 Query: 313 ----KELKDPVKDP 322 K+ + P + P Sbjct: 118 VFLMKQQESPARGP 131 >gi|2618482|dbj|BAA23370.1| dynein light intermediate chain 53/55 [Rattus norvegicus] Length = 235 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 49/134 (36%), Gaps = 12/134 (8%) Query: 198 QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTD 257 D+ E I LR YGA+LI+TS K E + +I +G Sbjct: 1 HDYRDEHLDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVV 60 Query: 258 PSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST--RER-- 312 + IPAG D+ +I + T+ ++ + D K + H+ E Sbjct: 61 EKDAVFIPAGWDNEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 117 Query: 313 ----KELKDPVKDP 322 K+ + P + P Sbjct: 118 VFLMKQQESPARGP 131 >gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] gi|21615436|emb|CAA94342.2| Hypothetical protein C39E9.14a [Caenorhabditis elegans] gi|21684778|emb|CAA97773.2| Hypothetical protein C39E9.14a [Caenorhabditis elegans] Length = 443 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 71/324 (21%), Positives = 122/324 (37%), Gaps = 56/324 (17%) Query: 1 MPKVSSDTLW--DIAAAEVRSRESRTDEEEA------EEEDAHFPSQRTVFFMGSKAGGK 52 MP ++ L D A A + S TDEE + + TV +G GK Sbjct: 1 MPP-TAQPLEFDDTANAVLPVLYSSTDEEVGIWRELLASKKTNTNQGSTVIVLGDNRSGK 59 Query: 53 TTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELG-GGISL--SDLVQIPI 109 +++L R + D T KP L Y R N +D ++ ++LG G +L S+L+QIP+ Sbjct: 60 SSLLSRLDKSDRTVKPKSLLGY---RVLHVQNDARDASYAYQLGTAGANLNPSELLQIPV 116 Query: 110 --------TADNVSFLS------VVLVLDLS--KPNALWETMESLLGSARNQVEKVCAAL 153 A + + +L S PN L +++ Q +K Sbjct: 117 WSLDGNAACASLLKHALPATPAEAIFILTASIDNPN-LIHSLKRWANVCTEQAQKHFTK- 174 Query: 154 QKTGESRSGKQRVPRVL---------------------HKDYPDRELISPFPVPLLIVGS 192 + RS ++++ + L V ++V + Sbjct: 175 EDLKAGRSQQEKMWQEYVDPVQSQMSTSVVGSFADEHNLLPLDQGTLTENCGVTFMVVIT 234 Query: 193 KFDIF--QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTER 250 K D+ ++F + I LR GA+L+FTS+K + + +I +FGT Sbjct: 235 KSDLVLGKEFTDAQFAKISIQLRKFCLSLGATLVFTSAKETKNIQLLQKYIVHRSFGTAF 294 Query: 251 PKSISTDPSKPLAIPAGSDSLSQI 274 + + + +PAG D +I Sbjct: 295 TSAAQVIERESIFVPAGWDGEKKI 318 >gi|2618478|dbj|BAA23368.1| dynein light intermediate chain 53/55 [Rattus norvegicus] Length = 249 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 4/113 (3%) Query: 198 QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTD 257 D+ E I LR YGA+LI+TS K E + +I +G Sbjct: 1 HDYRDEHLDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVV 60 Query: 258 PSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHEST 309 + IPAG D+ +I + T+ ++ + D K + H+ Sbjct: 61 EKDAVFIPAGWDNEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKE 110 >gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [Caenorhabditis briggsae] gi|39587719|emb|CAE58657.1| Hypothetical protein CBG01826 [Caenorhabditis briggsae] Length = 391 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 57/288 (19%), Positives = 104/288 (36%), Gaps = 43/288 (14%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNT- 85 E + + TV +G GK+++L R + D ++KP L Y Sbjct: 34 EVLASKKTNTNQGSTVIVLGDNRCGKSSLLARLDKSDRSSKPKSLLGYRVLHVQNDARDA 93 Query: 86 --------------PKDIAH--LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPN 129 P ++ +W L G S + L++ + A S + +L + PN Sbjct: 94 SYAYQLGTAGANLNPSELLQIPVWSLDGNESCASLLKYALPA-TPSEVVFILSASIDNPN 152 Query: 130 ALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL------------------- 170 L +++ Q +K + + R+ ++R+ + Sbjct: 153 -LINSLKRWANVCTEQAQKHFSK-EDLKAGRNQQERMWQEYVDPVQSHMSTSVVGSFADE 210 Query: 171 --HKDYPDRELISPFPVPLLIVGSKFDIF--QDFDSEKRKVICKTLRFLAHFYGASLIFT 226 LI V ++V +K D+ ++F + I LR L GA+LIFT Sbjct: 211 HSLLPLDQGTLIENCGVTFMVVITKSDLVLGKEFTDAQFAKISIQLRKLCLSLGATLIFT 270 Query: 227 SSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 S+K + + +I +FGT + + +PAG D +I Sbjct: 271 STKESKNIQLLQKYIVHRSFGTAFTSAAQVIERDSIFVPAGWDGEKKI 318 >gi|76162568|gb|AAX30491.2| SJCHGC04029 protein [Schistosoma japonicum] Length = 180 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 56/139 (40%), Gaps = 4/139 (2%) Query: 26 EEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNT 85 EE + +T+ +G GKTT++ R L+ E K LEY Sbjct: 25 EEVTHKAAVTLSPSKTLVVLGDDECGKTTLIAR-LQGTEDPKKGFGLEYCLLDIKDEDRD 83 Query: 86 PKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 + ++W L G S L++ I ++ +++ + + +P + + +G + Sbjct: 84 DQTKLNVWILDGNTVHSHLLKFAINEESFGDCFIMICVSMMEPWNIINNLNKWVGILKEH 143 Query: 146 VEKV---CAALQKTGESRS 161 ++ + L+ ++RS Sbjct: 144 IDGLRVPKEKLEAYKKNRS 162 >gi|124783774|gb|ABN14940.1| dynein light chain-A variant [Taenia asiatica] Length = 277 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 15/158 (9%) Query: 179 LISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSET 232 LI+ +PL++V +K D+ Q E+ +I +R YGA+L++ S+K+ Sbjct: 22 LINNLGIPLVVVVTKTDVMDDMERKQGMSEEQYDLIQMHIRRFCLSYGAALVYVSAKNGK 81 Query: 233 TMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNP 292 ++++ +G+ ++ + IPAG DSL++IG E ++ + Sbjct: 82 NCGLLKNYLQHRIYGSPFTQNAYVIDKDSVFIPAGWDSLNKIGL---LEQNLTKYRPGDD 138 Query: 293 FDLWKKVFEKVFPHESTRERK-ELKDPVKDPQFSEPLI 329 FD K V + P E E D Q+ I Sbjct: 139 FD--KVVPK---PQEQATTANREPAVTAADDQYFLSEI 171 >gi|158599820|gb|EDP37275.1| hypothetical protein Bm1_12090 [Brugia malayi] Length = 116 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 10/114 (8%) Query: 9 LWDIAAA----EVRSRESRTDEEEAE---EEDAHF-PSQRTVFFMGSKAGGKTTILLRFL 60 +W +A E R R + + S + GS+ GKT+++ RFL Sbjct: 4 IWSLARQQYLEECEKRTVRQQDAINSYINLIGSDLQTSDTRLIICGSRNCGKTSMIFRFL 63 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNV 114 R+E KPT+ALEYT+GRR RG KD+ ++WELGGG +L +L+QIP++++ + Sbjct: 64 NRNEDTKPTIALEYTYGRRNRGKM--KDVGNIWELGGGTNLCNLLQIPLSSNYI 115 >gi|134106957|ref|XP_777791.1| hypothetical protein CNBA4890 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260489|gb|EAL23144.1| hypothetical protein CNBA4890 [Cryptococcus neoformans var. neoformans B-3501A] Length = 610 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 55/328 (16%), Positives = 112/328 (34%), Gaps = 87/328 (26%) Query: 32 EDAHFPSQRTVFFMGSKAGGKTTILLRFLE--RDETAKP--------------------- 68 + ++ V + + G+T +L + + ++AKP Sbjct: 50 DRQKALGRKNVILLSERNHGRTHLLSQLTSSRKKKSAKPNSVFYWNGQPKSTSQPGDRRA 109 Query: 69 TLALEYTFGRRARGHNTPKD----IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 LAL Y D I+ + SL LV + +++ +V++VLD Sbjct: 110 GLALGY---EVIDAGEEYSDSAPPISVFYPPSSHPSLLKLVPSALPPKSLADTAVMIVLD 166 Query: 125 LSKPNALWETMESLLGSA---------RNQVEKVCAALQKTGE---SRSGKQRVPRVLHK 172 +KP+++ + + + L + ++E++ LQ + S Sbjct: 167 WTKPSSMLQELLNWLSWVEAWALGSAEKGEIEELHERLQSYLQHYTEPSATNTGVTAYSG 226 Query: 173 DYPDREL------ISPFPVPLLIVGSKFDIFQDFDSEK----------RKVICKTLRFLA 216 P L ++ +P+++V +K D+ + E + + LR + Sbjct: 227 LGPLLPLGAGTLTLNSSGIPIIVVCTKADLMDNVAEEIGIKGGRWEERTDWVQQVLRTIC 286 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERP----KSISTDPS------------- 259 YGA+L +T+ TT S +S++ + + TDPS Sbjct: 287 LSYGAALFYTAPTRPTTYSLLKSYLLHRLYTVPPSLSPAPTSLTDPSHIAPSPAQGVSTR 346 Query: 260 ------------KPLAIPAGSDSLSQIG 275 + +P+G DS +I Sbjct: 347 YPFAHRANVLDRDAVMVPSGWDSWGKIN 374 >gi|159106574|gb|EDP45457.1| hypothetical protein MGL_0446 [Malassezia globosa CBS 7966] Length = 436 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/319 (15%), Positives = 111/319 (34%), Gaps = 55/319 (17%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET----AKPTLA-LEYTFGRRARGHNTPKD-IAHLW 93 +T+ +G + GK+ ++ + + D+ K T L + F + T + ++ Sbjct: 22 KTIVVLGEPSSGKSILVRQLVGSDQARASGPKETSGPLGFGFIELSENDKTDESLRTSVY 81 Query: 94 EL-GGGISLSDLVQIPITA-------------DNVSFLSVVLVLDLSKPNALWETMESLL 139 + G S++ + + +++LD SKP + + Sbjct: 82 TVHSFGSSIAATLPYAFPPVQTAPDASAMGALHRMRETIFLIILDWSKPWTFAAQLVAWF 141 Query: 140 GSARNQVEKVCAALQKTG---ESRSGKQRVPRVLHKDYPD----RELISPFPVPLLIVGS 192 R +++ A Q+ E + ++ + L + D L V + +V + Sbjct: 142 RLLRELIQQAYVAGQEHSADTERATMRENLETHLFSNADDVRPPGMLTDNLGVHIALVCT 201 Query: 193 KFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 K D + + + + LR +A YGA++ T+ ++ R+ + + Sbjct: 202 KADCLDSAIKERRLSDSQIDSLQQFLRTVAMCYGAAIFSTTITRASSYDALRAHVRHTLY 261 Query: 247 ------GTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIG----------TLHAK 290 ST ++ L +PAG DS S+I A + + + Sbjct: 262 PDTSEANGTSTVEASTADTRHLLVPAGWDSWSKI---EAIDESFSCRTWHDAWIHDITSS 318 Query: 291 NPFD---LWKKVFEKVFPH 306 +P D + ++ P Sbjct: 319 SPLDATPRIASMCAELVPP 337 >gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Coprinopsis cinerea okayama7#130] Length = 513 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 108/318 (33%), Gaps = 76/318 (23%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 P+ + LWD V + + + + +G + GK+TI L+ Sbjct: 9 PEAPPENLWDSILNSVST--------------SRSIPAKQIILLGQPSTGKSTIASALLQ 54 Query: 62 R------DETAKPTLALEYTFGRRARGH-NTPKDIAHLWELGGGISLSDLVQIPITADN- 113 + + + A+ Y F + + + S ++L+ + Sbjct: 55 KNVSDENKDDGRIDFAVGYEFADVKDEEGRSSRYLMP----SSSHSYTNLLPHFVPPRTA 110 Query: 114 VSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD 173 + VV+VLD ++P E ++S L + K + + ++R P Sbjct: 111 LPHTCVVIVLDWTRPWTFIEELQSWLQWVEDW-AKGDGSREVEIVREENRERRP------ 163 Query: 174 YPDRELISP-FPVPLLIVGSKFDIFQDFD---------------SEKRKVICKTLRFLAH 217 L VP+++V SK D+ D E+ I + LR + Sbjct: 164 ---GTLTHNASGVPIIVVCSKADLIDDGPEIAAGAMVKGKGGEWEERTDGIMQVLRTICL 220 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAF--------------------GTERPKSISTD 257 YGA L++T+ ET R + L F +P ++ D Sbjct: 221 KYGAGLLYTTPLPETL-QILRQYALHLLFMPPAPSPGMEAQVPMKNIFPFQHKPNTLDRD 279 Query: 258 PSKPLAIPAGSDSLSQIG 275 + +PAG DS +IG Sbjct: 280 H---ILVPAGWDSWGKIG 294 >gi|58258773|ref|XP_566799.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57222936|gb|AAW40980.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 588 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 86/233 (36%), Gaps = 57/233 (24%) Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSA---------RNQVEKVC 150 SL LV + +++ +V++VLD +KP+++ + + + L + ++E++ Sbjct: 120 SLLKLVPSALPPKSLADTAVMIVLDWTKPSSMLQELLNWLSWVEAWALGSAEKGEIEELH 179 Query: 151 AALQKTGE---SRSGKQRVPRVLHKDYPDREL------ISPFPVPLLIVGSKFDIFQDFD 201 LQ + S P L ++ +P+++V +K D+ + Sbjct: 180 ERLQSYLQHYTEPSATNTGVTAYSGLGPLLPLGAGTLTLNSSGIPIIVVCTKADLMDNVA 239 Query: 202 SEK----------RKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERP 251 E + + LR + YGA+L +T+ TT S +S++ + Sbjct: 240 EEIGIKGGRWEERTDWVQQVLRTICLSYGAALFYTAPTRPTTYSLLKSYLLHRLYTVPPS 299 Query: 252 ----KSISTDPS-------------------------KPLAIPAGSDSLSQIG 275 + TDPS + +P+G DS +I Sbjct: 300 LSPAPTSLTDPSHIAPSPAQGVSTRYPFAHRANVLDRDAVMVPSGWDSWGKIN 352 >gi|71401049|ref|XP_803244.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70866044|gb|EAN81798.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 112 Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 9/103 (8%) Query: 262 LAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRER-------KE 314 L IP+ +D+ + IG P +++ D WK + +FP + + +R K Sbjct: 1 LVIPS-ADTFADIGEPAVSDMGGLQSTGDAELDRWKAPLDAMFPAKQSEDRMQNDSFLKR 59 Query: 315 LKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 L D + F EP +D++R QK+ EL+QY++ K KS D Sbjct: 60 LYD-TGENGFGEPTVDAVRKQKEDELEQYRKSAFKREKSTKDD 101 >gi|71018751|ref|XP_759606.1| hypothetical protein UM03459.1 [Ustilago maydis 521] gi|46099364|gb|EAK84597.1| hypothetical protein UM03459.1 [Ustilago maydis 521] Length = 746 Score = 97.5 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 61/462 (13%), Positives = 115/462 (24%), Gaps = 203/462 (43%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 P+ + D+ ++ + S +S + S + + +G GKT++L Sbjct: 38 PQHQQEQHQDLWSSILNSVKS-----------SKAISTKNIVLLGEPKSGKTSLLSALAS 86 Query: 62 ----------RDETAKPT--------------------------LALEYTFGRRARGHNT 85 T L L Y + + Sbjct: 87 TSPLGLVSGKSAFPPFATNTRLDDKPASAPAPPATSKLASMPDDLGLSYVYFDVGDEKDR 146 Query: 86 PKDIAHLWELGGGISLSD------LVQI-------------------------------- 107 + +A + G S L+ Sbjct: 147 DEIVARV---GAYTLHSSEPAYTSLLPFAFPEPNSSYSERDNSVIMASLASETLSTSAAA 203 Query: 108 PITAD----------NVSFLSVVLVLDLSKPNALWETMESLLG----------------- 140 P+ +D ++ VV++LD +P E + S L Sbjct: 204 PVDSDRTFSTKPSIDSLKESIVVILLDWEQPWTFLEHLRSWLSILSELVDAAADGALSAQ 263 Query: 141 --------SARNQVEKVCAALQKTGES--RSGKQRVPRVLHK------------------ 172 + R ++++ L+ + ++ Sbjct: 264 QQRDVKWSTTRVALDEMKEQLEAYIRTYAEPMQKATQSSTALGVDQAKGAATATHEASTP 323 Query: 173 -----------------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSE 203 + L +P+++V +K D +DF E Sbjct: 324 SSADAFPAPLTSVSALLDGADANPLSEGTLTDNLGIPIVVVCTKADAIARLERDKDFKEE 383 Query: 204 KRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF-------------GTER 250 + I + LR + YGA+L +TSS ++ RS++ F G Sbjct: 384 QFDYIQQVLRTICMKYGAALFYTSSVRAQSIDILRSYLLHRLFTPSSIGSQQQTDSGNST 443 Query: 251 PKSISTD------------------PSKPLAIPAGSDSLSQI 274 S T L +PAG DS +I Sbjct: 444 APSAQTSAAAGGVAVFGFGYRASTTDRDTLLVPAGWDSWGKI 485 >gi|45190737|ref|NP_984991.1| AER132Wp [Ashbya gossypii ATCC 10895] gi|44983716|gb|AAS52815.1| AER132Wp [Ashbya gossypii ATCC 10895] Length = 232 Score = 92.5 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 85/223 (38%), Gaps = 45/223 (20%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT++++++++ DE TL + Y R+ +T I + +LGG Sbjct: 20 LIGDAQVGKTSLMVKYVQNVFDEEYTQTLGVHYL-ERKINLGSTDV-IFSIMDLGGQREF 77 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ + + ++++ + DL++P L ++ AR Sbjct: 78 INMLPLV----SNRAVAIIFLFDLTRPETL-TSIREWYRQAR------------------ 114 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 E P +VG+K+D+F + D ++ + KT A GA Sbjct: 115 -------------GFNETAIPL-----LVGTKYDLFVNLDVAYQEELSKTSMRYAQVMGA 156 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 L+F S+ S + K I AF D PL I Sbjct: 157 PLVFCSTASSINVQKIFKVIIAKAFNLTLRIPEIKDMGDPLLI 199 >gi|50303633|ref|XP_451758.1| unnamed protein product [Kluyveromyces lactis] gi|49640890|emb|CAH02151.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140] Length = 223 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 94/251 (37%), Gaps = 61/251 (24%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT++++++++ DE TL + Y R+ +T I + +LGG Sbjct: 21 LIGDAQVGKTSLMVKYVQNVFDEEYTQTLGVHYL-ERKVVLGSTDV-IFSIMDLGGQREF 78 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ P+ ++ +++V + DL++P L +++ AR + + Sbjct: 79 INML--PLVSEGA--VAIVFLFDLTRPETL-NSIKEWYRQARGFNDTAIS---------- 123 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 ++VG+K+D+F D D E ++ + +T A + Sbjct: 124 --------------------------ILVGTKYDLFVDMDPEYQENVSRTAMKYAQVMKS 157 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATE 281 LIF S++S + K + AF QIG P+ Sbjct: 158 PLIFCSTQSSINVQKIFKVVIAKAFNLTLKVP----------------EYKQIGEPLLIY 201 Query: 282 VDIGTLHAKNP 292 G +P Sbjct: 202 KSFGPSRPSSP 212 >gi|121713178|ref|XP_001274200.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] gi|119402353|gb|EAW12774.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] Length = 509 Score = 89.4 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 82/282 (29%), Gaps = 51/282 (18%) Query: 39 QRTVFFMGSKA-------------GGKTTILLRFLERDETAKP-TLALEYTFGRRARGHN 84 ++ + +G +T++ + AL YT+ Sbjct: 34 EKNLLILGGTQDTQREFLETLSADTSDSTLIGEKRKGRVPPIANQFALGYTYQDVLDADQ 93 Query: 85 TPK-DIAHLWELGGG-ISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSA 142 + L +S + L++ +T +V VV++LD S P + + Sbjct: 94 EDTLARVSAYLLSEPSLSFAPLLKPLLTPQSVPETLVVILLDWSDPWTWIRRLREWVRLL 153 Query: 143 RNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD-------------------RELISPF 183 R V K + R D E Sbjct: 154 R-HVLFSLDDETKIVMEEIMTEWRDRKRGMDSGSAGAQGLTSSGGPVTIPLGPGEWDEGL 212 Query: 184 PVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKS 237 +P+ +V D + E+ I + LR + +GASLI+T+ + Sbjct: 213 GIPVCVVCQGADKIEKLEKDHGWREEEFDFILQFLRTILLKHGASLIYTT---PFLANSL 269 Query: 238 RSFI-----NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 +S I + K D K + +P DS +I Sbjct: 270 QSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPPNWDSWGKI 310 >gi|50293691|ref|XP_449257.1| unnamed protein product [Candida glabrata] gi|49528570|emb|CAG62231.1| unnamed protein product [Candida glabrata CBS 138] Length = 254 Score = 87.9 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 54/251 (21%), Positives = 95/251 (37%), Gaps = 50/251 (19%) Query: 21 ESRTDEEEAEEEDAHFPSQRT-----VFFMGSKAGGKTTILLRFLER--DETAKPTLALE 73 E R E EE PS R V +G GKT++++++++ DE TL + Sbjct: 5 EMRAASERVGEERNSLPSVRNQVDIQVGLIGDAQVGKTSLMVKYVQNIFDEEYTQTLGVN 64 Query: 74 YTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWE 133 F +R + + L +LGG +++ I +V ++L+ DL++P E Sbjct: 65 --FLKRKVSIRSTDIVFSLMDLGGQREFINMLPIATLGSSV----IILLFDLTRP----E 114 Query: 134 TMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSK 193 T+ S+ R + ++ +P+ +VG+K Sbjct: 115 TLNSIKEWYRQALG--------------------------------LNDSAIPI-LVGTK 141 Query: 194 FDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKS 253 +D+F D + E ++ + KT A A LIF S+ + K F Sbjct: 142 YDLFIDLEEEYQEKVSKTSMKYAQVMDAPLIFCSTAKSINIQKIFKVALAKIFDLTLTIP 201 Query: 254 ISTDPSKPLAI 264 + PL I Sbjct: 202 EINEIGDPLLI 212 >gi|66802470|ref|XP_635107.1| small GTPase [Dictyostelium discoideum AX4] gi|60463433|gb|EAL61618.1| small GTPase [Dictyostelium discoideum AX4] Length = 203 Score = 85.2 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 89/242 (36%), Gaps = 49/242 (20%) Query: 28 EAEEEDAHFPSQRTVFF----MGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRAR 81 E + + + V +G GKT+++++++E DE TL + F + Sbjct: 3 EEQFTGSSDTKKNNVVVKVGMVGDSQIGKTSLMVKYVEGTFDEDYIQTLGVN--FMEKTI 60 Query: 82 GHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGS 141 + +W+LGG +++ P+ ++ ++++ + DLS+ + L +++ Sbjct: 61 SIRGTEITFSIWDLGGQREFVNML--PLVCNDA--VAILFMFDLSRKSTL-NSVKEWYRQ 115 Query: 142 ARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFD 201 AR + PF ++G+KFD+F Sbjct: 116 AR-------------------------------GFNKTAIPF-----LIGTKFDVFATKP 139 Query: 202 SEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKP 261 E+++ I K R A + LIF S+ + K + AF +P Sbjct: 140 IEEQEEITKQARKFASAMKSPLIFCSTSHSINVQKIFKIVISKAFDLNCTIPKVVGVGEP 199 Query: 262 LA 263 L Sbjct: 200 LL 201 >gi|6323576|ref|NP_013647.1| GTP-binding protein of the ras superfamily involved in termination of M-phase; controls actomyosin and septin dynamics during cytokinesis [Saccharomyces cerevisiae] gi|730928|sp|P38987|TEM1_YEAST Protein TEM1 gi|537606|dbj|BAA07371.1| GTP-binding protein Tem1p [Saccharomyces cerevisiae] gi|558411|emb|CAA86257.1| unnamed protein product [Saccharomyces cerevisiae] gi|45269852|gb|AAS56306.1| YML064C [Saccharomyces cerevisiae] gi|151946100|gb|EDN64331.1| GTP-binding protein [Saccharomyces cerevisiae YJM789] Length = 245 Score = 84.8 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 84/228 (36%), Gaps = 45/228 (19%) Query: 39 QRTVFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELG 96 + V +G GKT++++++++ D+ TL + F +R + I + +LG Sbjct: 20 EVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVN--FLKRKVSIRSTDIIFSIMDLG 77 Query: 97 GGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 G +++ I V ++ + DL++P L +++ Q Sbjct: 78 GQREFINMLPIA----TVGSSVIIFLFDLTRPETL-SSIKEWYR-------------QAY 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 G + S +P+ +VG+K+D+ D D E ++ I +T A Sbjct: 120 GLNDSA----------------------IPI-LVGTKYDLLIDLDPEYQEQISRTSMKYA 156 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 A LIF S+ + K F + PL I Sbjct: 157 QVMNAPLIFCSTAKSINIQKIFKIALAKIFNLTLTIPEINEIGDPLLI 204 >gi|71019857|ref|XP_760159.1| hypothetical protein UM04012.1 [Ustilago maydis 521] gi|46099876|gb|EAK85109.1| hypothetical protein UM04012.1 [Ustilago maydis 521] gi|68051237|tpe|CAI77247.1| TPA: Ras-GTPase [Ustilago maydis 521] Length = 297 Score = 84.8 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 50/304 (16%), Positives = 102/304 (33%), Gaps = 66/304 (21%) Query: 44 FMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT++++R++E E TL + F + + +W+LGG Sbjct: 40 MVGDSQIGKTSLMVRYVEGSFNEDYIQTLGVN--FMEKTISIRNTEITFSIWDLGGQREF 97 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ P+ ++ ++++ + DL++ + L +++ AR Sbjct: 98 VNML--PLVCNDA--VAILFMFDLTRKSTL-NSIKEWYRQAR------------------ 134 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 + PF +VG+K+D + E++ I K R + A Sbjct: 135 -------------GFNKTAIPF-----LVGTKYDHYATLPREEQDEITKQARRFSKAMKA 176 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA--IPAGSDSLSQ------ 273 LIF S+ + K + AF + P +PL + A S ++ Sbjct: 177 PLIFCSTSHAINVQKIFKVLLAKAFDLKCTIPEIKGPGEPLLFYVTALRHSFARAHRHSP 236 Query: 274 -----IGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSE-P 327 + P NP + ++ + D +E Sbjct: 237 VFCIYMSLPKIQIFAFKVRRVTNP-------PDSQPAPDAGHGNSDRDDVKHVGGRAELL 289 Query: 328 LIDS 331 +DS Sbjct: 290 DVDS 293 >gi|115398722|ref|XP_001214950.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191833|gb|EAU33533.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 508 Score = 84.8 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 73/234 (31%), Gaps = 35/234 (14%) Query: 71 ALEYTFGRRARGHNTPK-DIAHLWELGGG-ISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 AL YT+ + L +S + L++ +T ++ VV++LD S P Sbjct: 81 ALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTPQSIPETLVVILLDWSDP 140 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD--------------- 173 + + R V K + R D Sbjct: 141 WTWVRRLREWVRLLR-HVLVSLDDETKIVMEEMMTEWRDRKRGMDAAGAQGLSGSGGPVT 199 Query: 174 --YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIF 225 E +P+ +V D + E+ I + LR + +GASLI+ Sbjct: 200 MPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEEFDFILQFLRTILLKHGASLIY 259 Query: 226 TSSKSETTMSKSRSFI-----NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 T+ + +S I + K D K + +P+ DS +I Sbjct: 260 TT---PFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPSNWDSWGKI 309 >gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150 [Aspergillus niger] gi|134076075|emb|CAK39434.1| unnamed protein product [Aspergillus niger] Length = 523 Score = 84.8 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 79/236 (33%), Gaps = 37/236 (15%) Query: 71 ALEYTFGRRARGHNTPK-DIAHLWELGGG-ISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 AL YT+ + + L +S + L++ +T ++ VV++LD S P Sbjct: 92 ALGYTYQDVLDADHEDTLARVSAYLLSEPSLSFAPLLKPLLTPQSIPETLVVILLDWSDP 151 Query: 129 NALWETMESLLGSARNQV-----EKVCAALQKTGESRSGKQR--------------VPRV 169 + + R V ++ +++ ++R Sbjct: 152 WTWIRRLREWVRLLR-HVLISLDDETKIVMEENLTEWRDRKRGMDSSSGGAQGFTSSAGP 210 Query: 170 LHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASL 223 + E +P+ +V D + E+ I + +R L +GASL Sbjct: 211 VTIPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEQFDFILQFMRTLLLKHGASL 270 Query: 224 IFTSSKSETTMSKSRSFI-----NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 I+T+ + +S I + K D K + +P+ DS +I Sbjct: 271 IYTT---PFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPSNWDSWGKI 322 >gi|145602494|ref|XP_359915.2| conserved hypothetical protein [Magnaporthe grisea 70-15] gi|145010912|gb|EDJ95568.1| conserved hypothetical protein [Magnaporthe grisea 70-15] Length = 252 Score = 82.1 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 92/245 (37%), Gaps = 56/245 (22%) Query: 22 SRTDEEEAEEEDAHFPSQRT-----------VFFMGSKAGGKTTILLRFLER--DETAKP 68 + + + + AH S V +G GKT+++++++E DE Sbjct: 36 NNSADHVSRGSGAHVDSGSNRDTGRNHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQ 95 Query: 69 TLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 TL + F + + +W+LGG +++ P+ ++ ++++ + DL++ Sbjct: 96 TLGVN--FMEKTISIRNTEITFSIWDLGGQREFVNML--PLVCNDA--VAILFMFDLTRK 149 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLL 188 + L +++ R G + +P+ Sbjct: 150 STL-NSIKEWYRQGR------------------GFNKTA-----------------IPI- 172 Query: 189 IVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 +VG+K+D F +F E ++ I R A ASLIF+S+ + K + AF Sbjct: 173 LVGTKYDHFVNFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDL 232 Query: 249 ERPKS 253 + Sbjct: 233 KCTIP 237 >gi|154285758|ref|XP_001543674.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150407315|gb|EDN02856.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 511 Score = 81.7 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 76/235 (32%), Gaps = 35/235 (14%) Query: 71 ALEYTFGRRARGHNTP-KDIAHLWELGGGIS-LSDLVQIPITADNVSFLSVVLVLDLSKP 128 AL YT+ ++ L S + L++ +T V +V++LD P Sbjct: 57 ALGYTYHDVLDADQEDILARVSIYLLSEPSSSFAPLLKPLLTPKTVPETLIVILLDWENP 116 Query: 129 NALWETMESLLGSARNQVE------KVCAA--LQKTGESRSGKQRVPRVLH--------- 171 ++ + R+ + KV + + + + G Sbjct: 117 WTWVRQLQEWIRLLRSVLISLDDETKVVMEEVMTEWRDHKRGGDPASSAGGGMTTSGGPV 176 Query: 172 -KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLI 224 E +P+ +V D + E+ I + +R + +GASLI Sbjct: 177 TIPLGPGEWDEGLGIPMCVVCQGADKIEKLEKEHGWHEEEFDFILQFMRTILLKHGASLI 236 Query: 225 FTSSKSETTMSKSRSFI-----NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 +T+ + +S I + K D K + IP+ DS +I Sbjct: 237 YTT---PFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILIPSNWDSWGKI 287 >gi|85098809|ref|XP_960671.1| hypothetical protein [Neurospora crassa OR74A] gi|38566780|emb|CAE76091.1| related to septum initiation protein sid3 [Neurospora crassa] Length = 314 Score = 81.7 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 98/252 (38%), Gaps = 51/252 (20%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFF----MGSKAGGKTTILLRFLER--DETAKPTLAL 72 SRT + E A+ V +G GKT+++++++E DE TL + Sbjct: 104 ENGSRTTAGGSSSEQANGR--NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGV 161 Query: 73 EYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALW 132 F + + +W+LGG +++ P+ ++ ++++ + DL++ + L Sbjct: 162 N--FMEKTISIRNTEITFSIWDLGGQREFVNML--PLVCNDA--VAILFMFDLTRKSTL- 214 Query: 133 ETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGS 192 +++ R G + +P ++VG+ Sbjct: 215 NSIKEWYRQGR------------------GFNKTA-----------------IP-VLVGT 238 Query: 193 KFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 K+D F + E+++ I R A A+LIF+S+ + K + AF + Sbjct: 239 KYDHFVNLSREEQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTI 298 Query: 253 SISTDPSKPLAI 264 ++ +PL + Sbjct: 299 PEISNVGEPLLL 310 >gi|157070013|gb|EAA31435.2| protein TEM1 [Neurospora crassa OR74A] Length = 282 Score = 81.7 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 98/252 (38%), Gaps = 51/252 (20%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFF----MGSKAGGKTTILLRFLER--DETAKPTLAL 72 SRT + E A+ V +G GKT+++++++E DE TL + Sbjct: 72 ENGSRTTAGGSSSEQANGR--NHVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGV 129 Query: 73 EYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALW 132 F + + +W+LGG +++ P+ ++ ++++ + DL++ + L Sbjct: 130 N--FMEKTISIRNTEITFSIWDLGGQREFVNML--PLVCNDA--VAILFMFDLTRKSTL- 182 Query: 133 ETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGS 192 +++ R G + +P ++VG+ Sbjct: 183 NSIKEWYRQGR------------------GFNKTA-----------------IP-VLVGT 206 Query: 193 KFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 K+D F + E+++ I R A A+LIF+S+ + K + AF + Sbjct: 207 KYDHFVNLSREEQEEISNQARRFAKAMRAALIFSSTSHSINVQKIFKIVLSKAFDLKCTI 266 Query: 253 SISTDPSKPLAI 264 ++ +PL + Sbjct: 267 PEISNVGEPLLL 278 >gi|154298912|ref|XP_001549877.1| septum-promoting GTP-binding protein 1 [Botryotinia fuckeliana B05.10] gi|150857608|gb|EDN32800.1| septum-promoting GTP-binding protein 1 [Botryotinia fuckeliana B05.10] Length = 312 Score = 81.3 bits (200), Expect = 8e-14, Method: Composition-based stats. Identities = 48/246 (19%), Positives = 96/246 (39%), Gaps = 47/246 (19%) Query: 12 IAAAEVRSRES--RTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER--DETAK 67 A E SR S TD+++ ++ + V +G GKT+++++++E DE Sbjct: 94 NAYQEQNSRSSGASTDQQQQQQRGSKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYI 153 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 TL + F + + +W+LGG +++ P+ ++ ++++ + DL++ Sbjct: 154 QTLGVN--FMEKTISIRNTEITFSIWDLGGQREFVNML--PLVCNDA--VAILFMFDLTR 207 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPL 187 + L +++ R + PF Sbjct: 208 KSTL-NSIKEWYRQGR-------------------------------GFNKTAIPF---- 231 Query: 188 LIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFG 247 +VG+K+D F +F E ++ I R A ASLIF+S+ + K + AF Sbjct: 232 -LVGTKYDHFVNFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFD 290 Query: 248 TERPKS 253 + Sbjct: 291 LKCTIP 296 >gi|119174895|ref|XP_001239770.1| hypothetical protein CIMG_09391 [Coccidioides immitis RS] gi|90298556|gb|EAS28187.1| hypothetical protein CIMG_09391 [Coccidioides immitis RS] Length = 239 Score = 81.3 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 95/238 (39%), Gaps = 49/238 (20%) Query: 22 SRTDEEEAEEEDAHFPSQRTVFF----MGSKAGGKTTILLRFLER--DETAKPTLALEYT 75 S++ E+ + PS+ +V +G GKT+++++++E DE TL + Sbjct: 30 SQSHSEQTSRPQSGPPSKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVN-- 87 Query: 76 FGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETM 135 F + + +W+LGG +++ P+ ++ ++++ + DL++ + L ++ Sbjct: 88 FMEKTISIRNTEITFSIWDLGGQREFVNML--PLVCNDA--VAILFMFDLTRKSTL-NSI 142 Query: 136 ESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFD 195 + R G + +PL +VG+K+D Sbjct: 143 KEWYRQGR------------------GFNKTA-----------------IPL-LVGTKYD 166 Query: 196 IFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKS 253 F +F E ++ I + A ASLIF+S+ + K + AF + Sbjct: 167 HFVNFPREDQEEISIQAKRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFDLKCTIP 224 >gi|58270378|ref|XP_572345.1| small monomeric GTPase [Cryptococcus neoformans var. neoformans JEC21] gi|134117828|ref|XP_772295.1| hypothetical protein CNBL1630 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254908|gb|EAL17648.1| hypothetical protein CNBL1630 [Cryptococcus neoformans var. neoformans B-3501A] gi|57228603|gb|AAW45038.1| small monomeric GTPase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 193 Score = 81.3 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 45/212 (21%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT+++++++E DE TL + F +A + +W+LGG Sbjct: 10 MVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVN--FMEKAISIRNTEITFSIWDLGGQREF 67 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 ++ P+ +++ ++++ + DL++ + L +++ AR Sbjct: 68 VSML--PLVSNDA--VAILFMFDLTRKSTL-NSVKEWYRQAR------------------ 104 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 G + +P+LI G+K+D F F +++ I + + + A Sbjct: 105 GFNKTA-----------------IPVLI-GTKYDQFASFPRAEQEEITRQAKRFSKAMHA 146 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKS 253 LIF S+ + K + AF + Sbjct: 147 PLIFCSTSHSINVQKIFKIVLAKAFDLKCVIP 178 >gi|50420681|ref|XP_458877.1| hypothetical protein DEHA0D10417g [Debaryomyces hansenii CBS767] gi|49654544|emb|CAG87029.1| unnamed protein product [Debaryomyces hansenii CBS767] Length = 199 Score = 80.9 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 88/225 (39%), Gaps = 52/225 (23%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHN 84 EE +E+ + + + + +G GKT+++++++E DE TL + + Sbjct: 2 EEQQEDHNNQVALK-IGLIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFM-----DKKI 55 Query: 85 TPKDIA---HLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGS 141 ++ +W+LGG +++ P+ +++ ++++ + DL++ + L +++ Sbjct: 56 QIRNTVITFSIWDLGGQKEFINML--PLVSNDA--VAILFMFDLTRKSTL-NSIKEWYRQ 110 Query: 142 ARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFD 201 R + PF +VG+K+D F D Sbjct: 111 VR-------------------------------GFNKTAIPF-----LVGTKYDQFIDLP 134 Query: 202 SEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 + + I + + H A +IF S+ + K I AF Sbjct: 135 YQDQMEITQQAKKFGHAMKAPVIFCSTSHSINVQKIFKIILSKAF 179 >gi|119479611|ref|XP_001259834.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] gi|119407988|gb|EAW17937.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] Length = 505 Score = 80.5 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 86/279 (30%), Gaps = 48/279 (17%) Query: 39 QRTVFFMG--------------SKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHN 84 ++ + +G + T I + R AL YT+ Sbjct: 34 EKNLLILGGTPESQREFIETLSADTSDPTLISEKRRGRLPPVANQFALGYTYHDVLDADQ 93 Query: 85 TPK-DIAHLWELGGG-ISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSA 142 + L +S + L++ +T +V VV++LD S P + + Sbjct: 94 EDTLARVSAYLLSEPSLSFAPLLKPLLTPQSVPETLVVILLDWSDPWTWVRRLREWVRLL 153 Query: 143 RNQV-----EKVCAALQK-----TGESRSGKQRVPRVLHKDYP------DRELISPFPVP 186 R V ++ +++ R + P E +P Sbjct: 154 R-HVLISLDDETKIVMEEIMTEWKDRKRGMDSGAQGLASSGGPVTIPPGPGEWDEGLGIP 212 Query: 187 LLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 + +V D + E+ I + +R + +GASL +T++ + +S Sbjct: 213 MCVVCQGADKIEKLEKEHGWREEEFDFILQFMRTILLKHGASLTYTTT---FLANSLQSL 269 Query: 241 I-----NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 I + K D K + +P DS +I Sbjct: 270 IHSSLGIHSLLKRQSLKHNVIDRDK-ILVPPNWDSWGKI 307 >gi|116194005|ref|XP_001222815.1| hypothetical protein CHGG_06720 [Chaetomium globosum CBS 148.51] gi|88182633|gb|EAQ90101.1| hypothetical protein CHGG_06720 [Chaetomium globosum CBS 148.51] Length = 539 Score = 80.5 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 110/343 (32%), Gaps = 49/343 (14%) Query: 16 EVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKT----TI----LLRFLERDETAK 67 + +E + P ++ + +G + T+ L R L+R+ + Sbjct: 27 KAEKKELWNSMLSSVASGRRLP-EKNIILLGGTVDSQREFFETLANNDLRRTLDRNASRM 85 Query: 68 P----TLALEYTFGRRARGHNTPK-DIAHLWELGGGIS-LSDLVQIPITADNVSFLSVVL 121 P + AL YT+ L+ L + + L++ +T ++ +V+ Sbjct: 86 PPVANSFALGYTYYDVLDADQEDTLARISLYTLTSPSAAFASLLRPLLTPQSIPNTLIVV 145 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKT------------------GESRSGK 163 +LD S+P + + R + + ++T + + Sbjct: 146 LLDWSEPWKWMRQLREWILLLRTVLVSLSDECEETMKEVMLAWRDRGRGGVTNLDGTAAV 205 Query: 164 QRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 + E +PL +V + Q + E+ V+ + LR Sbjct: 206 PTADGEMDLPVGPGEWTDELGLPLCVVCQNAEKMEYLEKTQSWKEEEFDVVLQFLRTTLL 265 Query: 218 FYGASLIFTS-SKSETTMSKSRSFI-NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 +GASLI+T+ S + S + + K D K + IP DS +I Sbjct: 266 RHGASLIYTTPSVPSQLPTLIHSSLGIHSLLKKQPLKHNVIDRDK-VVIPPNWDSWGKI- 323 Query: 276 PPVATEVDIGTLHAKNPFDLWKKVFEKVFP-HESTRERKELKD 317 N W ++ FP +S ++D Sbjct: 324 --RVLRDGFDVDLVSNG---WSIDLDQPFPRPQSNGSENGIED 361 >gi|68469427|ref|XP_721228.1| putative Ras family GTPase [Candida albicans SC5314] gi|46443137|gb|EAL02421.1| potential Ras family GTPase [Candida albicans SC5314] Length = 226 Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 83/223 (37%), Gaps = 45/223 (20%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT+++++++E DE TL + F + +W+LGG Sbjct: 45 LIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVN--FMDKKIQIRNTTITFSIWDLGGQKEF 102 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ P+ +++ ++++ + DL++ + L +++ R Sbjct: 103 INML--PLVSNDA--VAILFMFDLTRKSTL-NSIKEWYRQVR------------------ 139 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 + PF +VG+K+D F D + + I + + A Sbjct: 140 -------------GFNKTAIPF-----LVGTKYDQFIDLSFQDQIEITQQAKKFGSAMKA 181 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 +IF S+ + K I AF + + +P+ I Sbjct: 182 PVIFCSTSHSINVQKIFKIILSKAFDLKLNLDEIVNVGEPILI 224 >gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus oryzae] Length = 523 Score = 80.2 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 73/233 (31%), Gaps = 31/233 (13%) Query: 71 ALEYTFGRRARGHNTPK-DIAHLWELGGG-ISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 AL YT+ + L +S + L++ +TA +V VV++LD S P Sbjct: 92 ALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTAQSVPETLVVILLDWSDP 151 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD--------------- 173 + + R V K + + R D Sbjct: 152 WTWVRRLREWVRLLR-HVLISLDDETKIVMEETMTEWRDRKRGMDPSSTGAQGLTSSGGP 210 Query: 174 ----YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASL 223 E +P+ +V D + E+ I + +R + +GASL Sbjct: 211 VTIPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEEFDFILQFMRTILLKHGASL 270 Query: 224 IFTSS--KSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 I+T+ + S + K D K + +P+ DS +I Sbjct: 271 IYTTPFLVNSLQSLLHSSLGIHSLLKRQSLKHNVIDRDK-ILVPSNWDSWGKI 322 >gi|19114197|ref|NP_593285.1| GTPase Spg1 [Schizosaccharomyces pombe] gi|21542235|sp|P87027|SPG1_SCHPO Septum-promoting GTP-binding protein 1 (GTPase spg1) (Sid3 protein) gi|1935000|emb|CAA72985.1| GTPase [Schizosaccharomyces pombe] gi|9408178|emb|CAB99273.1| GTPase Spg1 [Schizosaccharomyces pombe] Length = 198 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 87/222 (39%), Gaps = 45/222 (20%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G + GKT++++ +++ DE + TL + F + + +W+LGG Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVN--FMEKTISIRNTEITFSIWDLGGQREF 72 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ P+ ++ ++++ + DLS+ + L +++ AR Sbjct: 73 VNML--PMVCNDA--VAILFMFDLSRKSTL-NSIKEWYRQAR------------------ 109 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 G + VP+LI G+K+D F F E ++ I K R A A Sbjct: 110 GFNKTA-----------------VPILI-GTKYDHFMTFPREDQEEITKQARRYAKAMKA 151 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 SL+F S+ + K + F + + P+ Sbjct: 152 SLVFCSTSHSINVQKIFKIVLAKVFDLKCTIPEIKNVGDPIL 193 >gi|68468881|ref|XP_721499.1| putative Ras family GTPase [Candida albicans SC5314] gi|46443419|gb|EAL02701.1| potential Ras family GTPase [Candida albicans SC5314] Length = 226 Score = 79.8 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 83/223 (37%), Gaps = 45/223 (20%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT+++++++E DE TL + F + +W+LGG Sbjct: 45 LIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVN--FMDKKIQIRNTTITFSIWDLGGQKEF 102 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ P+ +++ ++++ + DL++ + L +++ R Sbjct: 103 INML--PLVSNDA--VAILFMFDLTRKSTL-NSIKEWYRQVR------------------ 139 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 + PF +VG+K+D F D + + I + + A Sbjct: 140 -------------GFNKTAIPF-----LVGTKYDQFIDLSFQDQIEITQQAKKFGSAMKA 181 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 +IF S+ + K I AF + + +P+ I Sbjct: 182 PVIFCSTSHSINVQKIFKIILSKAFDLKLNLDEIVNVGEPILI 224 >gi|116503902|gb|EAU86797.1| septum-promoting GTP-binding protein 1 [Coprinopsis cinerea okayama7#130] Length = 218 Score = 79.0 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 88/223 (39%), Gaps = 45/223 (20%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT+++++++E DE TL + + + T +W+LGG Sbjct: 35 MVGDSQIGKTSLMVKYVEGSFDEDYIQTLGVNFMEKTISVRRTTI--TFSIWDLGGQREF 92 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ P+ ++ ++++ + DLS+ + L +++ AR Sbjct: 93 VNML--PLVCNDA--VAILFMFDLSRKSTL-NSVKEWYRQAR------------------ 129 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 + PF ++G+KFD F F ++++ I K + A A Sbjct: 130 -------------GFNKTAIPF-----LIGTKFDQFATFPRDEQEEITKQAKRFARAMHA 171 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 SLIF S+ + + K + AF + +P+ I Sbjct: 172 SLIFCSTSASINVQKIFKIVLAKAFDLKCVIPEIEGVGEPILI 214 >gi|156842204|ref|XP_001644471.1| hypothetical protein Kpol_520p36 [Vanderwaltozyma polyspora DSM 70294] gi|156115114|gb|EDO16613.1| hypothetical protein Kpol_520p36 [Vanderwaltozyma polyspora DSM 70294] Length = 225 Score = 79.0 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 85/228 (37%), Gaps = 45/228 (19%) Query: 39 QRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELG 96 + + +G GKT++++++++ + TL + F +R + + + +LG Sbjct: 14 EVQIGLVGDAQVGKTSLMVKYVQNIFNDEYTQTLGVN--FLKRKVSVRSTDIVFSILDLG 71 Query: 97 GGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 G +++ I ++ +++ + DL++P L +++ Q Sbjct: 72 GQKEFINMLPIA----SIGSSAIIFLFDLTRPETL-NSIKEWYR-------------QAN 113 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 G + +P+ +VG+K+D+F D D ++ I + A Sbjct: 114 GLNDQA----------------------IPI-LVGTKYDLFIDLDQSTQEKISRIAMQYA 150 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 A LIFTS+ + K F S + PL I Sbjct: 151 QVMNAPLIFTSTAKSINVQKIFKIALSKIFNLTLTISEINEIGDPLLI 198 >gi|121699736|ref|XP_001268133.1| GTP binding protein (SPG1), putative [Aspergillus clavatus NRRL 1] gi|119396275|gb|EAW06707.1| GTP binding protein (SPG1), putative [Aspergillus clavatus NRRL 1] Length = 319 Score = 78.2 bits (192), Expect = 7e-13, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 95/238 (39%), Gaps = 50/238 (21%) Query: 22 SRTDEEEAEEEDAHFPSQRTVFF----MGSKAGGKTTILLRFLER--DETAKPTLALEYT 75 S+ +E +++ + P++ +V +G GKT+++++++E DE TL + Sbjct: 111 SQVSQEVGQKQPSQ-PTKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVN-- 167 Query: 76 FGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETM 135 F + + +W+LGG +++ P+ ++ ++++ + DL++ + L ++ Sbjct: 168 FMEKTISIRNTEITFSIWDLGGQREFVNML--PLVCNDA--VAILFMFDLTRKSTL-NSI 222 Query: 136 ESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFD 195 + R + PF +VG+K+D Sbjct: 223 KEWYRQGR-------------------------------GFNKTAIPF-----LVGTKYD 246 Query: 196 IFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKS 253 F +F E ++ I + A ASLIF+S+ + K + AF + Sbjct: 247 HFVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIP 304 >gi|119471324|ref|XP_001258159.1| GTP binding protein (SPG1), putative [Neosartorya fischeri NRRL 181] gi|119406311|gb|EAW16262.1| GTP binding protein (SPG1), putative [Neosartorya fischeri NRRL 181] Length = 319 Score = 78.2 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 97/238 (40%), Gaps = 50/238 (21%) Query: 22 SRTDEEEAEEEDAHFPSQRTVFF----MGSKAGGKTTILLRFLER--DETAKPTLALEYT 75 S+T ++ ++++ + P++ +V +G GKT+++++++E DE TL + Sbjct: 111 SQTSQDVSQKQPSQ-PTKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVN-- 167 Query: 76 FGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETM 135 F + + +W+LGG +++ P+ ++ ++++ + DL++ + L ++ Sbjct: 168 FMEKTISIRNTEITFSIWDLGGQREFVNML--PLVCNDA--VAILFMFDLTRKSTL-NSI 222 Query: 136 ESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFD 195 + R + PF +VG+K+D Sbjct: 223 KEWYRQGR-------------------------------GFNKTAIPF-----LVGTKYD 246 Query: 196 IFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKS 253 F +F E ++ I + A ASLIF+S+ + K + AF + Sbjct: 247 HFVNFPREDQEEISIQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIP 304 >gi|67536988|ref|XP_662268.1| hypothetical protein AN4664.2 [Aspergillus nidulans FGSC A4] gi|40741516|gb|EAA60706.1| hypothetical protein AN4664.2 [Aspergillus nidulans FGSC A4] Length = 522 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 82/278 (29%), Gaps = 35/278 (12%) Query: 71 ALEYTFGRRARGHNTPK-DIAHLWELGGG-ISLSDLVQIPITADNVSFLSVVLVLDLSKP 128 AL YT+ + L +S + L++ +T ++ SVV++LD S P Sbjct: 101 ALGYTYLDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTPQSIPETSVVILLDWSDP 160 Query: 129 NALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD--------------- 173 + + R V K + Q R D Sbjct: 161 WTWVRRLREWVRLLR-HVLVSLDDETKVVMEENMTQWRERKKGIDTSSTGSQATSSGSAI 219 Query: 174 YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTS 227 E VPL +V D + ++ I + +R L +GASLI+T Sbjct: 220 IGPGEWDEGLGVPLCVVCQGTDKMEKLERDHGWSEDEFDFIHQFMRTLLVKHGASLIYTK 279 Query: 228 SKSETTMSKSRSFINQLAFGTERPK---SISTDPSKPLAIPAGSDSLSQIGPPVATEVDI 284 + + L + K + + IP DS ++I Sbjct: 280 PFHANNLHSV--LHSSLGIHSLLKKLSLKANFIERDKILIPTNWDSWAKIRVIREGSNLE 337 Query: 285 GTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDP 322 G A + + E S R + D + Sbjct: 338 GISTAWSI--EIQDPPE----PLSDRNDEAQDDGSSEE 369 >gi|50549767|ref|XP_502355.1| hypothetical protein [Yarrowia lipolytica] gi|49648223|emb|CAG80543.1| unnamed protein product [Yarrowia lipolytica CLIB122] Length = 200 Score = 77.1 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 89/226 (39%), Gaps = 45/226 (19%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT++++++ E DE TL + F + + +W+LGG Sbjct: 15 LIGDAQIGKTSLMVKYAEGNFDEDYVQTLGVN--FMEKTVSIRDTEITFLIWDLGGQREF 72 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ + ++ D+V +++ + DL++ + L +++ AR Sbjct: 73 VNMLPL-VSNDSV---AILFMFDLTRKSTL-NSVKEWYRQAR------------------ 109 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 + PF +VG+K+D+F E ++ I + + A A Sbjct: 110 -------------GFNKTAIPF-----LVGTKYDLFVQLPKEDQEEITQQAKKFAKAMKA 151 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 SLIF S+ + K + AF + T+ +P+ + G Sbjct: 152 SLIFCSTSHSINVQKIFKIVLSKAFDLKLTIPEITNTGEPILVYQG 197 >gi|159114236|ref|XP_001707343.1| Tem-1-like protein [Giardia lamblia ATCC 50803] gi|157435447|gb|EDO79669.1| Tem-1-like protein [Giardia lamblia ATCC 50803] Length = 196 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 87/225 (38%), Gaps = 46/225 (20%) Query: 42 VFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G+ GKT++++R++E + +L + + R H+ P + +W+LGG Sbjct: 9 IALLGNAEAGKTSLMVRYVEGEFNHNYIQSLGVNFM-ERTITLHDNPV-LLSIWDLGGES 66 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 +++ P+ D + DL+ +L +++ A+ Sbjct: 67 EFKNML--PLVCDGSMVFLYIF--DLTSKTSL-ASIKEWYRQAKA--------------- 106 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 ++ P ++VG+K+D F++ +K++ I + R + Sbjct: 107 --------------------LNRSAFP-VLVGAKYDRFRELREDKKREIIEHARRYSKAM 145 Query: 220 -GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 L+FTS++ +++ + L FG +P+ Sbjct: 146 KNCPLVFTSAELGVNINRLFKLVVCLVFGLNPGIEQIEADDQPIF 190 >gi|28396142|gb|AAO39054.1| Tem-1-like protein [Giardia intestinalis] Length = 206 Score = 76.7 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 87/225 (38%), Gaps = 46/225 (20%) Query: 42 VFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G+ GKT++++R++E + +L + + R H+ P + +W+LGG Sbjct: 19 IALLGNAEAGKTSLMVRYVEGEFNHNYIQSLGVNFM-ERTITLHDNPV-LLSIWDLGGES 76 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 +++ P+ D + DL+ +L +++ A+ Sbjct: 77 EFKNML--PLVCDGSMVFLYIF--DLTSKTSL-ASIKEWYRQAKA--------------- 116 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 ++ P ++VG+K+D F++ +K++ I + R + Sbjct: 117 --------------------LNRSAFP-VLVGAKYDRFRELREDKKREIIEHARRYSKAM 155 Query: 220 -GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 L+FTS++ +++ + L FG +P+ Sbjct: 156 KNCPLVFTSAELGVNINRLFKLVVCLVFGLNPGIEQIEADDQPIF 200 >gi|83768709|dbj|BAE58846.1| unnamed protein product [Aspergillus oryzae] Length = 200 Score = 76.3 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 82/212 (38%), Gaps = 45/212 (21%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT+++++++E DE TL + F + + +W+LGG Sbjct: 17 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVN--FMEKTISIRNTEITFSIWDLGGQREF 74 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ P+ ++ ++++ + DL++ + L +++ R Sbjct: 75 VNML--PLVCNDA--VAILFMFDLTRKSTL-NSIKEWYRQGR------------------ 111 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 + PF +VG+K+D F +F E ++ I + A A Sbjct: 112 -------------GFNKTAIPF-----LVGTKYDHFVNFPREDQEEISVQAKRFAKAMKA 153 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKS 253 SLIF+S+ + K + AF + Sbjct: 154 SLIFSSTSHSINVQKIFKIVLAKAFDLKCTIP 185 >gi|2408103|emb|CAA04846.1| sid3 [Schizosaccharomyces pombe] Length = 199 Score = 75.9 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 87/223 (39%), Gaps = 46/223 (20%) Query: 44 FMGSKAGGKTTILLRFLER---DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGIS 100 +G + GKT++++ +++ +E+ + + + F + + +W+LGG Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLVGVN--FMEKTISIRNTEITFSIWDLGGQRE 72 Query: 101 LSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR 160 +++ P+ ++ ++++ + DLS+ + L +++ AR Sbjct: 73 FVNML--PMVCNDA--VAILFMFDLSRKSTL-NSIKEWYRQAR----------------- 110 Query: 161 SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYG 220 G + VP+LI G+K+D F F E ++ I K R A Sbjct: 111 -GFNKTA-----------------VPILI-GTKYDHFMTFPREDQEEITKQARRYAKAMK 151 Query: 221 ASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 ASL+F S+ + K + F + + P+ Sbjct: 152 ASLVFCSTSHSINVQKIFKIVLAKVFDLKCTIPEIKNVGDPIL 194 >gi|46135805|ref|XP_389594.1| hypothetical protein FG09418.1 [Gibberella zeae PH-1] Length = 512 Score = 75.1 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 97/290 (33%), Gaps = 50/290 (17%) Query: 24 TDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL------------- 70 T E+ P ++ + +G G FLE +++P Sbjct: 28 TSMLESVASGKRLP-EKNLIVLG----GSPEHQRDFLESLSSSEPRRNADRLKIPPIANN 82 Query: 71 -ALEYTFGRRARGHNTPK-DIAHLWELGG-GISLSDLVQIPITADNVSFLSVVLVLDLSK 127 AL YT+ L+ L + LV +T + + S++++LD S+ Sbjct: 83 FALGYTYYDVLDADQDDTLARVSLYFLSQASTEFASLVAPLLTPETIPNTSLIILLDWSQ 142 Query: 128 PNALWETMESLLGSARN-----------QVEKVCAALQKTGESRSGKQ----RVPRVLHK 172 P+ + + + + +E+V +A ++ G + Sbjct: 143 PHLWLRQIWTWVQVIQEVLKKVDTDQHALMEEVMSAWKERGRGGAATNLDGTPSATATGS 202 Query: 173 DYPDR------ELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFT 226 D E P +PL +V + +++ D + + LR + +GASLI+T Sbjct: 203 DGDSSLPLGPGEWEEPLGLPLCVVCQ--NAWKEPD---FDTVLQYLRTVLLRHGASLIYT 257 Query: 227 -SSKSETTMSKSRSFINQL-AFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 + S S + K D K + +P DS +I Sbjct: 258 SQNAPSQLPSLIHSTLGITSLLKRHPLKHNVIDRDK-IVVPTNWDSWGKI 306 >gi|67484658|ref|XP_657549.1| cell cycle-associated GTPase [Entamoeba histolytica HM-1:IMSS] Length = 189 Score = 74.8 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 73/218 (33%), Gaps = 45/218 (20%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G GKT+++++++E DE TL + + + +W+LGG Sbjct: 8 IAMVGDAGVGKTSLMVKYVEGNFDEDYIQTLGVN--CMEKTISLKGKEVTFSVWDLGGQR 65 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 ++ P+ D ++ DL++ L ++ AR Sbjct: 66 EYITML--PMVMDGAR--VILFFFDLTRVMTL-NNIKDWYKEARAHNNSAS--------- 111 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 ++VG+K+D+F D D+ ++ I T A Sbjct: 112 ---------------------------CILVGTKYDLFADLDATEKSRITATALKYAQAM 144 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTD 257 AS +F SS + FG +T+ Sbjct: 145 KASCVFCSSSQGINIQNVFKVSLAKVFGLTLNVPQTTE 182 >gi|70992145|ref|XP_750921.1| GTP binding protein (SPG1), putative [Aspergillus fumigatus Af293] gi|66848554|gb|EAL88883.1| GTP binding protein (SPG1), putative [Aspergillus fumigatus Af293] Length = 389 Score = 74.4 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 96/249 (38%), Gaps = 61/249 (24%) Query: 22 SRTDEEEAEEEDAHFPSQRTVFF----MGSKAGGKTTILLRFLER--DETAKPTLALEYT 75 S+T ++ ++ + P++ +V +G GKT+++++++E DE TL + Sbjct: 111 SQTSQDVSQRPPSQ-PTKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVN-- 167 Query: 76 FGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETM 135 F + + +W+LGG +++ P+ ++ ++++ + DL++ + L ++ Sbjct: 168 FMEKTISIRNTEITFSIWDLGGQREFVNML--PLVCNDA--VAILFMFDLTRKSTL-NSI 222 Query: 136 ESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFD 195 + R + PF +VG+K+D Sbjct: 223 KEWYRQGR-------------------------------GFNKTAIPF-----LVGTKYD 246 Query: 196 IFQDF--DSEKRKVICKTLR---------FLAHFYGASLIFTSSKSETTMSKSRSFINQL 244 F +F + ++ I K R A ASLIF+S+ + K + Sbjct: 247 HFVNFPREDQEEISIQKMTRHVLMISQAKRFAKAMKASLIFSSTSHSINVQKIFKIVLAK 306 Query: 245 AFGTERPKS 253 AF + Sbjct: 307 AFDLKCTIP 315 >gi|145243196|ref|XP_001394138.1| hypothetical protein An11g01310 [Aspergillus niger] gi|134078809|emb|CAK45868.1| unnamed protein product [Aspergillus niger] Length = 214 Score = 74.0 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 82/212 (38%), Gaps = 45/212 (21%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT+++++++E DE TL + F + + +W+LGG Sbjct: 31 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVN--FMEKTISIRNTEITFSIWDLGGQREF 88 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ P+ ++ ++++ + DL++ + L +++ R Sbjct: 89 VNML--PLVCNDA--VAILFMFDLTRKSTL-NSIKEWYRQGR------------------ 125 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 + PF ++G+K+D F +F E ++ I + A A Sbjct: 126 -------------GFNKTAIPF-----LIGTKYDHFVNFPREDQEEISIQAKRFAKAMKA 167 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKS 253 SLIF+S+ + K + AF + Sbjct: 168 SLIFSSTSHSINVQKIFKIVLAKAFDLKCTIP 199 >gi|150865994|ref|XP_001385439.2| predicted protein [Pichia stipitis CBS 6054] gi|149387250|gb|ABN67410.2| predicted protein [Pichia stipitis CBS 6054] Length = 199 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 82/236 (34%), Gaps = 61/236 (25%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT+++++++E DE TL + F + +W+LGG Sbjct: 18 LIGDSQIGKTSLMVKYVEGSFDEDYIQTLGVN--FMDKKIQIRNTTITFSIWDLGGQKEF 75 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ P+ +++ ++++ + DL++ + L +++ R Sbjct: 76 INML--PLVSNDA--VAILFMFDLTRKSTL-NSIKEWYRQVR------------------ 112 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 + PF ++G+K+D F D + + I + A Sbjct: 113 -------------GFNKTALPF-----LIGTKYDQFIDLSYQDQVEITSQAKKFGRAMKA 154 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 +IF S+ + K I AF D ++ IG P Sbjct: 155 PVIFCSTSHSINVQKIFKIILSKAFDLRLN----------------LDEINNIGEP 194 >gi|119183788|ref|XP_001242885.1| hypothetical protein CIMG_06781 [Coccidioides immitis RS] gi|90301671|gb|EAS31302.1| hypothetical protein CIMG_06781 [Coccidioides immitis RS] Length = 531 Score = 73.2 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 77/230 (33%), Gaps = 30/230 (13%) Query: 71 ALEYTFGRRARGHNTP-KDIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVLVLDLSKP 128 AL YT+ ++ L + + L++ + +V +V++LD P Sbjct: 96 ALGYTYRDVLDADQEDILSRVSIYLLSEPSPAFAPLLKPLLNPKSVRETLIVILLDWESP 155 Query: 129 NALWETMESLLGSARNQ-----------VEKVCA--ALQKTGESRSGKQRVPRVLHKDYP 175 + + R+ +E++ Q+ G + + Sbjct: 156 WLWVRQLREWIRLLRSVLFSLDDDTKLVMEEIMMEWKGQRRGTDSTYPAGSSAPVSIPLG 215 Query: 176 DRELISPFPVPLLIVGS------KFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSK 229 E +P+ +V K + + E+ I + +R + +G+SLI+T+ Sbjct: 216 PGEWDEGLGIPMCVVCQGAEKIEKLEKDHGWREEEFDFILQFMRTILLKHGSSLIYTT-- 273 Query: 230 SETTMSKSRSFI-----NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 + +S I + K D K + +P+ DS +I Sbjct: 274 -PFLANSLQSLIHSSLGIHSLLKRQSFKHNVIDRDK-ILVPSNWDSWGKI 321 >gi|39971217|ref|XP_366999.1| hypothetical protein MGG_03075 [Magnaporthe grisea 70-15] gi|149210811|ref|XP_001522780.1| hypothetical protein MGCH7_ch7g878 [Magnaporthe grisea 70-15] gi|86196833|gb|EAQ71471.1| hypothetical protein MGCH7_ch7g878 [Magnaporthe grisea 70-15] gi|145017071|gb|EDK01434.1| hypothetical protein MGG_03075 [Magnaporthe grisea 70-15] Length = 561 Score = 72.8 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 120/385 (31%), Gaps = 70/385 (18%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTIL-------LRFLERDETAKPTL---ALEYTF 76 E+ P ++ + +G + + L R L+ + P AL T+ Sbjct: 32 LESVASGKRLP-EKNLLVLGGTVETQRSFLETLSSDFRRTLD-TDHIPPVANHFALGNTY 89 Query: 77 GRRARGHNTP-KDIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVLVLDLSKPNALW-- 132 L+ L S S L++ +T + VV++LD S P LW Sbjct: 90 YDVLDADQEDILARITLYSLTKPSASFSSLLKPLLTPQTIPNTLVVILLDWSHPW-LWMR 148 Query: 133 ----------ETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK---------- 172 + SL A++ +E+V + G + + Sbjct: 149 QLRDWILLLRTVLVSLSIEAKDAMEEVMIGWRDRGRGGASTNLDGSGVATAAMASDGGAG 208 Query: 173 ------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYG 220 E +PL +V D Q + E+ V+ + +R + +G Sbjct: 209 SDSVALPLGPGEWEDALGLPLSVVCQNADKIDSLEKRQGWKEEQFDVVMQFMRTVLLKHG 268 Query: 221 ASLIFT-SSKSETTMSKSRSFINQL-AFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPV 278 ASLI+T +S S S + + K D K + +P DS +I Sbjct: 269 ASLIYTSTSVPSQLPSLIHSSLGITSLLKRQPLKHNVIDRDK-IVVPPNWDSWGKI---R 324 Query: 279 ATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQ-FSEPLIDSIRAQKD 337 + W ++ FP ES R D + + FS+ D Q + Sbjct: 325 VLRDGFDVEMVS---EGWSIDLDQPFPRESARTLN--GDGLNEAGEFSDSESDDGARQSE 379 Query: 338 QE---------LDQYKREQAKSWKS 353 + +Q + + + Sbjct: 380 DDQVEGSAVVLYEQKIENPSAAAQQ 404 >gi|70935784|ref|XP_738930.1| hypothetical protein PC000669.03.0 [Plasmodium chabaudi chabaudi] gi|56515533|emb|CAH80037.1| conserved hypothetical protein [Plasmodium chabaudi] Length = 373 Score = 72.8 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 101/317 (31%), Gaps = 77/317 (24%) Query: 32 EDAHFPSQRTVFFMGSKAGGKTTILLRF----LERDETA--------KPTLALEYTFGRR 79 + + +G+K GK+++L LE D L +Y Sbjct: 29 DKNDEVENSHIIILGNKDVGKSSLLKSLQKISLEGDGEYTDLLYKNEIRVLPFDYGCLNI 88 Query: 80 ARGHNTPK--DI---AHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWET 134 + K DI +H+W L S L++ N+ + +++ DL KP + Sbjct: 89 KNFEDNKKIHDIQGNSHVWILQHPCYTSLLIKNLKNFKNIKKIIILICTDLYKPYNIISE 148 Query: 135 MESLLGS-------------------ARNQVE------KVCAALQKTGESR--------- 160 + S + +N +E K KTG Sbjct: 149 INSWIDVMHKIFEDLYSDYDMEVVGELKNNLETYIYNYKGVEKNGKTGTKEEQHVTNGVG 208 Query: 161 ------SGKQRVP----RVLHKDYPDRELIS-PFPVPLLIVGSKFD--------IFQDFD 201 S K+ V + +L+ P++ V K D +Q + Sbjct: 209 THSDFESNKEGSIDSVNNVRKEKEGRAKLVKINLSFPIVFVICKSDGYEILNNRTYQGY- 267 Query: 202 SEKRKVICKTLRFLAHFYGASLIF--TSSKSE-TTMSKSRSFINQLAFGTERPKSISTDP 258 VI LR LA Y A+++F T +K+E + ++ + + D Sbjct: 268 ---IDVIISYLRNLAISYQAAILFCNTINKNELINVELLYRYMMHRLYDFPFKEKEILDC 324 Query: 259 SKPLAIPAGSDSLSQIG 275 + + IP+G D I Sbjct: 325 YEKIFIPSGYDDEELIN 341 >gi|156097140|ref|XP_001614603.1| hypothetical protein PVX_098765 [Plasmodium vivax Salvador I] gi|148803477|gb|EDL44876.1| hypothetical protein, conserved [Plasmodium vivax] Length = 822 Score = 72.4 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 52/350 (14%), Positives = 102/350 (29%), Gaps = 103/350 (29%) Query: 19 SRESRTDEEEAEEEDA-------HFPSQRT-------VFFMGSKAGGKTTILLRFLERD- 63 + +R DE+EA E+ + ++ + +G+K GK++++ E Sbjct: 293 DKGTRQDEDEAHEKKSIYQNILKKLNMEKNEELESSHIIILGNKDVGKSSLVKSLQEISL 352 Query: 64 -----------ETAKPTLALEYTFGRRARGH-----NTPKDIAHLWELGGGISLSDLVQI 107 + L L+Y N K +H+W L + L++ Sbjct: 353 QGDKNDGEVLYQNGGGVLPLDYACLGVKNLEENKKANEVKGSSHVWILQHSSYVGSLIKN 412 Query: 108 PITADNVSFLSVVLVLDLSKPNALWETMESLLG---SARNQVE---------KVCAALQK 155 ++ + +++ DL KP + + + + ++ +LQ Sbjct: 413 LKKFKDIKKVIILICTDLYKPYNIMSEINQWIDVLYVIFEHLHSDYSMEELRELKESLQS 472 Query: 156 TG-----ESRSGKQRVP-------------------------RVLHKDYPDRELIS---- 181 ++ K+R R I Sbjct: 473 YVHNYKRDALERKKREKKCQVGVNPRNGITVGDSQPLMGESSREGQVKLSSSSSIREENT 532 Query: 182 -----------PFPVPLLIVGSKFD--------IFQDFDSEKRKVICKTLRFLAHFYGAS 222 P+L V K D +Q + VI LR LA Y A+ Sbjct: 533 SNVERDGLIKINMSFPILFVICKSDGYEILNNRTYQGY----MDVIIAYLRNLAVNYQAA 588 Query: 223 LIFTSS---KSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 IF ++ K + +I + D + + +P+G D Sbjct: 589 TIFCNTANKKEAKNVKLLYRYIMHRLHNFPFSDNAILDDYERVFVPSGYD 638 >gi|115399058|ref|XP_001215118.1| septum-promoting GTP-binding protein 1 [Aspergillus terreus NIH2624] gi|114192001|gb|EAU33701.1| septum-promoting GTP-binding protein 1 [Aspergillus terreus NIH2624] Length = 312 Score = 72.4 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 64/273 (23%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVF---FMGSKAGGKTTILLR 58 P SS ++ E +++ + + V +G GKT+++++ Sbjct: 68 PPTSSRPSSGLSGPERYGPSQEVTQKQPSQPPSSQTKNSVVIKVGMVGDAQIGKTSLMVK 127 Query: 59 FLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSF 116 ++E DE TL + F + + +W+LGG +++ P+ ++ Sbjct: 128 YVEGSWDEDYIQTLGVN--FMEKTISIRNTEITFSIWDLGGQREFVNML--PLVCNDA-- 181 Query: 117 LSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD 176 ++++ + DL++ + L +++ R Sbjct: 182 VAILFMFDLTRKSTL-NSIKEWYRQGR-------------------------------GF 209 Query: 177 RELISPFPVPLLIVGSKFDIFQDFDSEKRKVI---CKTL-------------RFLAHFYG 220 + PF +VG+K+D F +F E ++ I + + + A Sbjct: 210 NKTAIPF-----LVGTKYDHFVNFPREDQEEISIQVRHIPRRGIPCTDGLKAKRFAKAMK 264 Query: 221 ASLIFTSSKSETTMSKSRSFINQLAFGTERPKS 253 ASLIF+S+ + K + AF + Sbjct: 265 ASLIFSSTSHSINVQKIFKIVLAKAFDLKCTIP 297 >gi|68066998|ref|XP_675470.1| hypothetical protein PB000846.00.0 [Plasmodium berghei strain ANKA] gi|56494675|emb|CAH94781.1| conserved hypothetical protein [Plasmodium berghei] Length = 399 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 85/257 (33%), Gaps = 59/257 (22%) Query: 73 EYTFGRRAR-GHN----TPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 +Y + G N + +H+W L S L++ N+ + +++ DL K Sbjct: 9 DYGYLNVKDFGDNKKIHDTQGNSHVWILQHSCYTSLLIKNLKNFPNIKKIIILICTDLYK 68 Query: 128 PNALWETMESLLGS-------------------ARNQVE------KVCAALQKTGESRSG 162 P + + S + ++++E K +K + Sbjct: 69 PYNIISDINSWIDVMHKIYEDLYSDYDMNIVSGLKDELETYIYNYKHGKDSEKKENRETD 128 Query: 163 KQRVPRVLHKDYP-----------DRELIS-PFPVPLLIVGSKFD--------IFQDFDS 202 + K+ ++LI P++ V K D +Q + Sbjct: 129 RIDAYLDFEKNQEGNIDNVKNEENRKKLIKINLSFPIIFVICKSDGYEILNNRTYQGY-- 186 Query: 203 EKRKVICKTLRFLAHFYGASLIF--TSSKSE-TTMSKSRSFINQLAFGTERP-KSISTDP 258 VI LR LA Y A++IF T +K+E + ++ + K I Sbjct: 187 --IDVIISYLRNLAISYQAAIIFCNTINKNELINVELLYKYMMHRLYNFTFKEKEILNCY 244 Query: 259 SKPLAIPAGSDSLSQIG 275 K + IP+G D I Sbjct: 245 EK-IFIPSGYDDEKLIN 260 >gi|82594415|ref|XP_725415.1| dynein light intermediate chain 2, cytosolic [Plasmodium yoelii yoelii str. 17XNL] gi|23480414|gb|EAA16980.1| dynein light intermediate chain 2, cytosolic [Plasmodium yoelii yoelii] Length = 694 Score = 70.5 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 100/293 (34%), Gaps = 62/293 (21%) Query: 41 TVFFMGSKAGGKTTILLRFLERD------------ETAKPTLALEYTFGRRARGHNTPK- 87 + +G+K GK+++L + + L +Y + K Sbjct: 256 HIIILGNKDVGKSSLLKALQKIALENDGEYLDLLYRSEIRVLPFDYGCLNIKNFEDDKKI 315 Query: 88 -DI---AHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGS-- 141 D +H+W L S L++ N+ + +++ DL KP + + + + Sbjct: 316 HDTQGNSHVWILQHPFYTSLLIKNLKKIQNIKKIIILICTDLYKPYNIISEINTWVDVMH 375 Query: 142 -----------------ARNQVEKVCA--ALQKTGESRSGK---------QRVPRVLHKD 173 ++++EK K E + + Q + V +++ Sbjct: 376 KIYEELYSNYDIDIVSGLKDELEKYIYNYKQGKNCEKKENREIDVYSGLEQNIDNVKNEE 435 Query: 174 YPDRELISPFPVPLLIVGSKFD--------IFQDFDSEKRKVICKTLRFLAHFYGASLIF 225 + + P++ V K D +Q + VI LR LA Y ++IF Sbjct: 436 NQKKLIKINLSFPIIFVICKSDGYEILNNRTYQGY----IDVIISYLRNLAISYQGAIIF 491 Query: 226 --TSSKSE-TTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 T +K+E + +I + ++ D + + IP+G D I Sbjct: 492 CNTINKNELINIELLYKYIMHRLYDFPFKENEILDCYEKIFIPSGYDDEKLIN 544 >gi|154303178|ref|XP_001551997.1| hypothetical protein BC1G_09609 [Botryotinia fuckeliana B05.10] gi|150855072|gb|EDN30264.1| hypothetical protein BC1G_09609 [Botryotinia fuckeliana B05.10] Length = 517 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 101/295 (34%), Gaps = 44/295 (14%) Query: 18 RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTIL--------LRFLERDETAKPT 69 ++ + + P ++ + +G A + L + +R + +P Sbjct: 20 EKKDMWSSMLDGVASGKRLP-EKNILVLGGTADSQKEFLEALSVDETRKSQDRQSSKQPP 78 Query: 70 LA----LEYTFGRRARGHNTP-KDIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVLVL 123 +A L YT+ + L+ L S + L+Q +T + +V++L Sbjct: 79 IANNFALGYTYHDVLDADHEDILARLSLYLLADPSPSFTPLMQPLLTPQTIPNTLIVILL 138 Query: 124 DLSKPNALWETMESLLGSAR-----------NQVEKVCAALQKTGESRS-----GKQRVP 167 D S+P + + + R ++E+V + + G S G Sbjct: 139 DWSQPWFWLKELRDWIRLLRPLLISLDEDCKEKMEEVMISWRDRGRGGSTLDGGGSTATE 198 Query: 168 RVLHKDYPDRELISPFPVPLLIVGSKFDIF---QDFDSEKRKVICKTLRFLAHFYGASLI 224 + E +PL V K + + + ++ + + LR + +GASLI Sbjct: 199 GDVSLPLGPGEWEEALGLPLC-VSDKIETLEKERSWREDEFDYVLQFLRTILLKHGASLI 257 Query: 225 FTSSKSETTMSKSRSFI-----NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 +T+ +S + I + + D K + +P DS +I Sbjct: 258 YTT---PGVISPLQGLIHSSLGIHSLLKRQPIRHNLIDRDK-VVVPPNWDSWGKI 308 >gi|85089469|ref|XP_957965.1| hypothetical protein [Neurospora crassa OR74A] Length = 531 Score = 69.8 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 94/299 (31%), Gaps = 59/299 (19%) Query: 16 EVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSK--------AGGKTTILLRFLERDETAK 67 E +E + ++ P ++ + +G L R +R + K Sbjct: 24 EKEKKELWSSMLDSVASAKRLP-EKNILLLGGSVDSQREFFESLSRNELRRNTDRQGSRK 82 Query: 68 PTLA----LEYTFGRRARGHNTPK-DIAHLWEL-GGGISLSDLVQIPITADNVSFLSVVL 121 P +A L YT+ L+ L + + L+Q IT ++ +V+ Sbjct: 83 PPIANSFALGYTYYDVLDADQEDTLARISLYTLTDPSPAFASLIQPLITPQSIPNTLIVI 142 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKV----CAALQKT----------------GESRS 161 +LD S+P + + R +K+ A +++ G S Sbjct: 143 LLDWSQPWKWMRQLREWILLLRTVFQKLNRECSATMEEVMTVWRERGRGGGLNLDGTSAV 202 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGS---KFDIF---QDFDSEKRKVICKTLRFL 215 + E +PL +V K D Q + E+ V+ + LR + Sbjct: 203 PTTSADADVSLPVGPGEWEDALGMPLCVVCQNAEKMDHLEKTQGWKEEEFDVVLQFLRTI 262 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 +SL S + K + K D K + +P DS +I Sbjct: 263 LLRLHSSLGIHS-----LLKK------------QPLKHNVIDRDK-ILVPPNWDSWGKI 303 >gi|117939049|dbj|BAF36678.1| Small G Protein RAB [Pyrsonympha grandis] Length = 183 Score = 67.8 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 63/174 (36%), Gaps = 42/174 (24%) Query: 42 VFFMGSKAGGKTTILLRF----LERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GKT+++ R+ R+ K T+ +++ + + LW++ G Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSRE--YKATIGVDFAY-KLIPIAEDKVVRLQLWDIAG 60 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 ++ ++ ++V DLS+P L +++ Sbjct: 61 QERYGNMTRVYYR----EAFGAIIVFDLSRPGTL-DSVRKW------------------- 96 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQD-FDSEKRKVICK 210 K + + PD P+P++++ +K D+ ++ + C+ Sbjct: 97 -----KADIDSKVRLPDPDE-----SPIPVVLMANKCDLIRNGINPVHLDQYCR 140 >gi|117939057|dbj|BAF36682.1| Small G Protein RAB [Dinenympha exilis] Length = 187 Score = 67.4 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 63/174 (36%), Gaps = 42/174 (24%) Query: 42 VFFMGSKAGGKTTILLRF----LERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GKT+++ R+ R+ K T+ +++ + + LW++ G Sbjct: 4 VLVVGDLGVGKTSLIQRYVYNIFSRE--YKATIGVDFAY-KLIPIAEDKVVRLQLWDIAG 60 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 ++ ++ ++V DLS+P L +++ Sbjct: 61 QERYGNMTRVYYR----EAFGAIIVFDLSRPGTL-DSVRKW------------------- 96 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQD-FDSEKRKVICK 210 K + + PD P+P++++ +K D+ ++ + C+ Sbjct: 97 -----KADIDSKVRLPDPDE-----SPIPVVLMANKCDLIRNGINPVHLDQYCR 140 >gi|117939047|dbj|BAF36677.1| Small G Protein RAB [Pyrsonympha grandis] gi|117939051|dbj|BAF36679.1| Small G Protein RAB [Dinenympha exilis] gi|117939053|dbj|BAF36680.1| Small G Protein RAB [Dinenympha exilis] gi|117939055|dbj|BAF36681.1| Small G Protein RAB [Dinenympha exilis] Length = 187 Score = 67.4 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 63/174 (36%), Gaps = 42/174 (24%) Query: 42 VFFMGSKAGGKTTILLRF----LERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GKT+++ R+ R+ K T+ +++ + + LW++ G Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSRE--YKATIGVDFAY-KLIPIAEDKVVRLQLWDIAG 60 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 ++ ++ ++V DLS+P L +++ Sbjct: 61 QERYGNMTRVYYR----EAFGAIIVFDLSRPGTL-DSVRKW------------------- 96 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQD-FDSEKRKVICK 210 K + + PD P+P++++ +K D+ ++ + C+ Sbjct: 97 -----KADIDSKVRLPDPDE-----SPIPVVLMANKCDLIRNGINPVHLDQYCR 140 >gi|117939059|dbj|BAF36683.1| Small G Protein RAB [Dinenympha exilis] Length = 186 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 63/174 (36%), Gaps = 42/174 (24%) Query: 42 VFFMGSKAGGKTTILLRF----LERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GKT+++ R+ R+ K T+ +++ + + LW++ G Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSRE--YKATIGVDFAY-KLIPIAEDKVVRLQLWDIAG 60 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 ++ ++ ++V DLS+P L +++ Sbjct: 61 QERYGNMTRVYYR----EAFGAIIVFDLSRPGTL-DSVRKW------------------- 96 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQD-FDSEKRKVICK 210 K + + PD P+P++++ +K D+ ++ + C+ Sbjct: 97 -----KADIDSKVRLPDPDE-----SPIPVVLMANKCDLIRNGINPVHLDQYCR 140 >gi|117939043|dbj|BAF36675.1| Small G Protein RAB [Pyrsonympha grandis] gi|117939045|dbj|BAF36676.1| Small G Protein RAB [Pyrsonympha grandis] Length = 184 Score = 66.3 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 63/174 (36%), Gaps = 42/174 (24%) Query: 42 VFFMGSKAGGKTTILLRF----LERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GKT+++ R+ R+ K T+ +++ + + LW++ G Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSRE--YKTTIGVDFAY-KLIPIAEDKVVRLQLWDIAG 60 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 ++ ++ ++V DLS+P L +++ Sbjct: 61 QERYGNMTRVYYR----EAFGAIIVFDLSRPGTL-DSVRKW------------------- 96 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQD-FDSEKRKVICK 210 K + + PD P+P++++ +K D+ ++ + C+ Sbjct: 97 -----KADIDSKVRLPDPDE-----SPIPVVLMANKCDLIRNGINPVHLDQYCR 140 >gi|117939061|dbj|BAF36684.1| Small G Protein RAB [Dinenympha exilis] Length = 187 Score = 65.5 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 65/175 (37%), Gaps = 44/175 (25%) Query: 42 VFFMGSKAGGKTTILLRF----LERDETAKPTLALEYTFGRRARGHNTPKDI-AHLWELG 96 V +G GKT+++ R+ R+ K T+ +++ + + K + LW++ Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSRE--YKATIGVDFAY--KLIPIAEDKVVGLQLWDIA 59 Query: 97 GGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 G ++ ++ ++V DLS+P L +++ Sbjct: 60 GQERYGNMTRVYYR----EAFGAIIVFDLSRPGTL-DSVRKW------------------ 96 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQD-FDSEKRKVICK 210 K + + PD P+P++++ +K D+ ++ + C+ Sbjct: 97 ------KADIDSKVRLPDPDE-----SPIPVVLMANKCDLIRNGINPVHLDQYCR 140 >gi|14275892|dbj|BAB58892.1| Tem1-like protein [Giardia intestinalis] Length = 177 Score = 65.1 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 81/214 (37%), Gaps = 46/214 (21%) Query: 53 TTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPIT 110 T++++R++E + +L + + R H+ P + +W+LGG +++ P+ Sbjct: 1 TSLMVRYVEGEFNHNYIQSLGVNFM-ERTITLHDNPV-LLSIWDLGGESEFKNML--PLV 56 Query: 111 ADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL 170 D + DL+ +L +++ A+ Sbjct: 57 CDGSMVFLYIF--DLTSKTSL-ASIKEWYRQAKA-------------------------- 87 Query: 171 HKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY-GASLIFTSSK 229 ++ P ++VG+K+D F++ +K++ I + R + L+FTS++ Sbjct: 88 ---------LNRSAFP-VLVGAKYDRFRELREDKKREIIEHARRYSKAMKNCPLVFTSAE 137 Query: 230 SETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 +++ + L FG +P+ Sbjct: 138 LGVNINRLFKLVVCLVFGLNPGIEQIEADDQPIF 171 >gi|154413508|ref|XP_001579784.1| hypothetical protein TVAG_268310 [Trichomonas vaginalis G3] gi|121913994|gb|EAY18798.1| hypothetical protein TVAG_268310 [Trichomonas vaginalis G3] Length = 314 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 86/235 (36%), Gaps = 13/235 (5%) Query: 42 VFFMGSKAGGKTTILLRFL-ERDE-TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 F +G GK++++ F E E ++ T EYT + K + H++E Sbjct: 24 FFLIGRHGSGKSSLIANFSPEVKELQSRSTFGYEYT-----DFVHDNKYLIHIYEFN-DT 77 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 + ++L+ + +N+ ++ D++ P + + +++ + + + + Sbjct: 78 AYNNLL-FDLIKENIDKSCIIFTFDINHPTTISTDVTNIIAPLYTSLNQFFENTTRQKDL 136 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 + ++ + VP + VG+ + +D K LR A Y Sbjct: 137 EKYYSTICSKDPINHSQSTMKINTYVPTVFVGTFDESLEDLSDPKFDGYMNYLREAAIPY 196 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 GAS+ T SKS+ + + + IP DS+ ++ Sbjct: 197 GASI--TLSKSKIALELFIYLSLREQISEFYWDKVC--ERTNYFIPPAWDSIEKV 247 >gi|149243794|ref|XP_001526528.1| septum-promoting GTP-binding protein 1 [Lodderomyces elongisporus NRRL YB-4239] gi|146448922|gb|EDK43178.1| septum-promoting GTP-binding protein 1 [Lodderomyces elongisporus NRRL YB-4239] Length = 170 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 78/211 (36%), Gaps = 45/211 (21%) Query: 56 LLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADN 113 +++++E DE TL + + R + T + +W+LGG +++ P+ +++ Sbjct: 1 MVKYVEGSFDEDYIQTLGVNFMDKRIQIRNTTI--MFSIWDLGGQKEFINML--PLVSND 56 Query: 114 VSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD 173 ++++ + DL++ + L +++ R Sbjct: 57 A--VAILFMFDLTRKSTL-NSIKEWYRQVR------------------------------ 83 Query: 174 YPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 + PF +VG+K+D F D + + I + + A +IF S+ Sbjct: 84 -GFNKTAIPF-----LVGTKYDQFIDLPFQDQIEITQQAKKFGAAMKAPVIFCSTSHSIN 137 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 + K I AF + +P+ I Sbjct: 138 VQKIFKIILSKAFDIRLNLEEIVNVGEPILI 168 >gi|124506681|ref|XP_001351938.1| hypothetical protein PFI0315c [Plasmodium falciparum 3D7] gi|23504965|emb|CAD51749.1| hypothetical protein [Plasmodium falciparum 3D7] Length = 837 Score = 64.4 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 35/163 (21%) Query: 175 PDRELIS--PFPVPLLIVGSKFD--------IFQDFDSEKRKVICKTLRFLAHFYGASLI 224 PD+E + P+ + K D +Q + VI LR LA Y A++I Sbjct: 597 PDKERLIKINLTFPIFFIICKSDGYEILNNRTYQGY----MDVIISYLRNLAINYQAAII 652 Query: 225 F--TSSKS-ETTMSKSRSFINQLAFGTERP-KSISTDPSKPLAIPAGSDSLSQIGPPVAT 280 + T +K + +I + K I D K + IP+G D+L I Sbjct: 653 YCNTINKDHPKNIELLYKYIMHRLYNFPFNEKPILNDYEK-IFIPSGYDNLELIN----- 706 Query: 281 EVDIGTLHAKNPFDLWKKVFEKV----FPHEST--RERKELKD 317 + + K ++ + P++S + + D Sbjct: 707 -----KSIKNTFVENFHKPYDSIIIKPIPNKSIVEQNENVVDD 744 Score = 60.1 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 56/151 (37%), Gaps = 29/151 (19%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER-----D 63 ++D ++ +++ E + G+K GK+ ++ E + Sbjct: 339 IYDNILKQLNIQKNENLE------------NSHIIIFGNKDVGKSCLVKALQEICINNDE 386 Query: 64 ETAKP-------TLALEYTFGRRA--RGHNTPKDI---AHLWELGGGISLSDLVQIPITA 111 + P L L+Y + + KDI +H+W L ++ L++ Sbjct: 387 QEDYPFYCNKNRVLPLDYACLKVKNIDENRKVKDIKSNSHIWILQHPSYINSLIKNIKNF 446 Query: 112 DNVSFLSVVLVLDLSKPNALWETMESLLGSA 142 NV + +++ DL KP + + S + + Sbjct: 447 KNVENVIILICTDLYKPYNIMSDINSWIDTL 477 >gi|33146727|dbj|BAC79616.1| putative Septum-promoting GTP-binding protein 1 (GTPase spg1) [Oryza sativa (japonica cultivar-group)] Length = 297 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 79/230 (34%), Gaps = 57/230 (24%) Query: 42 VFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIA--------HLW 93 V +G GKT+ +++++ DE L+ T K +A +W Sbjct: 115 VSLLGDCQIGKTSFMVKYVGDDE---EQNGLQMTGLNL-----MDKTLAVRGARIAFSIW 166 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 ++ G D +PI + ++++ + DL+ L ++ AR Sbjct: 167 DVAGDSQFLD--HVPIACKDA--VAILYMFDLTSRCTLTNVID-WYERAR---------- 211 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 K ++ +P+LI G+KFD F E + I R Sbjct: 212 -KWNKTA------------------------IPILI-GTKFDDFAQLPLEMQWTIVNEAR 245 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 A A+L F+SS ++K FI F + +P+ Sbjct: 246 AYARAMKATLFFSSSTHNINVNKIFKFITAKLFNLPWTVERNLTVGEPII 295 >gi|125600478|gb|EAZ40054.1| hypothetical protein OsJ_023537 [Oryza sativa (japonica cultivar-group)] Length = 313 Score = 63.2 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 79/230 (34%), Gaps = 57/230 (24%) Query: 42 VFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIA--------HLW 93 V +G GKT+ +++++ DE L+ T K +A +W Sbjct: 131 VSLLGDCQIGKTSFMVKYVGDDE---EQNGLQMTGLNL-----MDKTLAVRGARIAFSIW 182 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 ++ G D +PI + ++++ + DL+ L ++ AR Sbjct: 183 DVAGDSQFLD--HVPIACKDA--VAILYMFDLTSRCTLTNVID-WYERAR---------- 227 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 K ++ +P+LI G+KFD F E + I R Sbjct: 228 -KWNKTA------------------------IPILI-GTKFDDFAQLPLEMQWTIVNEAR 261 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 A A+L F+SS ++K FI F + +P+ Sbjct: 262 AYARAMKATLFFSSSTHNINVNKIFKFITAKLFNLPWTVERNLTVGEPII 311 >gi|125558566|gb|EAZ04102.1| hypothetical protein OsI_025334 [Oryza sativa (indica cultivar-group)] Length = 314 Score = 62.8 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 79/230 (34%), Gaps = 56/230 (24%) Query: 42 VFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIA--------HLW 93 V +G GKT+ +++++ DE L+ T K +A +W Sbjct: 131 VSLLGDCQIGKTSFMVKYVGDDE---EQNGLQMTGLNL-----MDKTLAVRGARIAFSIW 182 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 ++ G D +PI + ++++ + DL+ L ++ AR Sbjct: 183 DVAGDSQFLD--HVPIACKDA--VAILYMFDLTSRCTLTNVID-WYERAR---------- 227 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 K + + +P+LI G+KFD F E + I R Sbjct: 228 -KWNKVTA-----------------------IPILI-GTKFDDFAQLPLEMQWTIVNEAR 262 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 A A+L F+SS ++K FI F + +P+ Sbjct: 263 AYARAMKATLFFSSSTHNINVNKIFKFITAKLFNLPWTVERNLTVGEPII 312 >gi|123473325|ref|XP_001319851.1| Ras family protein [Trichomonas vaginalis G3] gi|121902644|gb|EAY07628.1| Ras family protein [Trichomonas vaginalis G3] Length = 201 Score = 62.8 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 10/116 (8%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTP 86 A + P + V +G GKT+I+ RF+E+ D +PT+ +F + +T Sbjct: 3 AAKRKEDLPEYK-VVMLGDSNVGKTSIIHRFIEKSFDHDYEPTVGA--SFLTKVMKVDTD 59 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSA 142 K + ++W+ G L+ A N + +LV D+ P+ +E Sbjct: 60 KLVLNIWDTAGQERYKSLIS--TYARNAH--AAILVYDVMNPDTF-TNVEKWRDEL 110 >gi|67470492|ref|XP_651210.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS] gi|56790096|dbj|BAD82844.1| small GTPase EhRabL2 [Entamoeba histolytica] gi|56790098|dbj|BAD82845.1| small GTPase EhRabL1 [Entamoeba histolytica] Length = 206 Score = 62.8 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 78/196 (39%), Gaps = 44/196 (22%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G + GKT+ + +F + D +PT+ +E++ + + + LW++ G Sbjct: 5 IIVVGDPSSGKTSSIHQFCDGIFDNNYQPTIGVEFSSKFISIDGKSVELR--LWDIAGQD 62 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 + + ++ L +++ D++ N++ E + Sbjct: 63 HYAGMSRVYYNG----ALGAIVMCDVTNKNSI----EGAMKW------------------ 96 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 + DR L + +P+L+VG+K D+ Q D + K I L ++ Sbjct: 97 -----------KANIDDRVLFNNEKIPVLLVGNKTDLIQ--DEAQLKAIQYQLGEISASN 143 Query: 220 G-ASLIFTSSKSETTM 234 G + I TS+++ + Sbjct: 144 GFSGYILTSARTSHNL 159 >gi|156371538|ref|XP_001628820.1| predicted protein [Nematostella vectensis] gi|156215806|gb|EDO36757.1| predicted protein [Nematostella vectensis] Length = 241 Score = 62.4 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 69/201 (34%), Gaps = 54/201 (26%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAH--LWELGG 97 V +G GKT+I+ R+ E K T+ +++ H K + LW++ G Sbjct: 19 VLVIGEYGVGKTSIIRRYTEGYFSPNYKLTIGVDFAL---KIIHWDEKTKINLQLWDVAG 75 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 + ++ ++ ++V DLS+ + + +V Sbjct: 76 HERFGHMTRVYYK----YAIAAIIVFDLSRSATF-DAILKWYRDVNQKV----------- 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDF--DSEKRKVICKTLRFL 215 L + P+P++I+ +K D+ +D+ D EK Sbjct: 120 --------------------MLTNENPIPVIILANKCDL-EDYPVDEEKLD-------QF 151 Query: 216 AHFYG-ASLIFTSSKSETTMS 235 G A TS+K + + Sbjct: 152 CQNNGFAGWFATSAKEDYNID 172 >gi|157069725|gb|EAA28729.2| hypothetical protein NCU09982 [Neurospora crassa OR74A] Length = 527 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 94/303 (31%), Gaps = 71/303 (23%) Query: 16 EVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSK--------AGGKTTILLRFLERDETAK 67 E +E + ++ P ++ + +G L R +R + K Sbjct: 24 EKEKKELWSSMLDSVASAKRLP-EKNILLLGGSVDSQREFFESLSRNELRRNTDRQGSRK 82 Query: 68 PTLA----LEYTFGRRARGHNTPK-DIAHLWEL-GGGISLSDLVQIPITADNVSFLSVVL 121 P +A L YT+ L+ L + + L+Q IT ++ +V+ Sbjct: 83 PPIANSFALGYTYYDVLDADQEDTLARISLYTLTDPSPAFASLIQPLITPQSIPNTLIVI 142 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE--SRSGKQ--RVPRVLHKDYPDR 177 +LD S+P + R + + QK S + ++ V R + Sbjct: 143 LLDWSQPW-------KWMRQLREWILLLRTVFQKLNRECSATMEEVMTVWRERGRGGG-L 194 Query: 178 ELISPFPVP-----------------------LLIVGSKFDIF---QDFDSEKRKVICKT 211 L VP ++I K D Q + E+ V+ + Sbjct: 195 NLDGTSAVPTTSADADVSLPVGPGEWEDALANVMIQAEKMDHLEKTQGWKEEEFDVVLQF 254 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 LR + +SL S + K + K D K + +P DS Sbjct: 255 LRTILLRLHSSLGIHS-----LLKK------------QPLKHNVIDRDK-ILVPPNWDSW 296 Query: 272 SQI 274 +I Sbjct: 297 GKI 299 >gi|158593583|gb|EDP32178.1| small GTP binding protein RAB28, putative [Brugia malayi] Length = 221 Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 75/192 (39%), Gaps = 55/192 (28%) Query: 42 VFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + G A GKT++ +RF + + + T+ L++ F RR ++W++GG Sbjct: 15 IVVCGDGASGKTSLCVRFAQDNFGRQYQQTIGLDF-FTRRLTLP------GNIWDIGGQS 67 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 S +++ I + V+V D++ ++ E +E + + V K Sbjct: 68 IASPMLEKYI--NGAHG--AVVVYDVTNSSSF-ENLEDWINIIKQ-VTKTQER------- 114 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV--ICKTLRFLAH 217 PV L++VG+K D+ E R+V I + A Sbjct: 115 ------------------------PVVLMLVGNKTDL------EHRRVIRIERHT-KFAL 143 Query: 218 FYGASLIFTSSK 229 YG S + S+K Sbjct: 144 QYGMSSYYVSAK 155 >gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum] Length = 228 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 43/197 (21%), Positives = 65/197 (32%), Gaps = 53/197 (26%) Query: 42 VFFMGSKAGGKTTILLRFLERDE---TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF RD +K T+ +E F R + A +W+ G Sbjct: 30 VVLIGDSGVGKSNLLSRF-TRDTFDLESKSTIGVE--FATRNVNIDGKVIKAQIWDTAGQ 86 Query: 99 ISLSDLVQIPITADNVSFLSVVLVL-DLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ LV+ D+ K + + S L R+ EK + Sbjct: 87 ERYR-----AITSAYYRGAVGALVVYDVCKLQSF-HNLTSWLNELRDHAEKNIVMM---- 136 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +VG+K D+ R V + RF A Sbjct: 137 -------------------------------LVGNKCDLRH-----LRNVGTEDARFFAQ 160 Query: 218 FYGASLIFTSSKSETTM 234 G S I TS+ T + Sbjct: 161 QQGLSFIETSALDSTNV 177 >gi|123470795|ref|XP_001318601.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121901364|gb|EAY06378.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 194 Score = 59.7 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 76/210 (36%), Gaps = 54/210 (25%) Query: 33 DAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIA 90 D+ P + V +G GKT+++ RF + E A T+ Y + I Sbjct: 2 DSDIPEFK-VVTVGDSGVGKTSLVKRFSDGVFTEGAATTIGAAYV---KVDVVIANSPIC 57 Query: 91 -HLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKV 149 ++W+ G L+ + + + ++V+D+S+ ++ V + Sbjct: 58 LNIWDTAGQERFQSLIPLYLRSAQA----CIIVVDISQ---------------KDAVSNL 98 Query: 150 CAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVIC 209 VL +++ D I P + L++ G+K D+ D+D Sbjct: 99 ------------------NVLFENFKD---ILPQDICLVLAGNKKDLVPDYDPTP----- 132 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 L A S IFTS+KS + Sbjct: 133 --LLGWADKNKMSCIFTSAKSGENVDLLFQ 160 >gi|118401353|ref|XP_001032997.1| Ras family protein [Tetrahymena thermophila SB210] gi|89287343|gb|EAR85334.1| Ras family protein [Tetrahymena thermophila SB210] Length = 225 Score = 59.3 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 42 VFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDI--AHLWELGG 97 + +G GKT+I+ RF E K T+ +EY+ + + + A +W+ G Sbjct: 19 ILLIGDSGVGKTSIMNRFTENKFNVEIKSTIGVEYS----KKTMVIDQAVIQASIWDTAG 74 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 L + + +LV D+++P+ L + L K Sbjct: 75 QERFRSLAK-----NYYKGAIGALLVFDVTRPHTLENIQKIWLQEVEQHASKNIK 124 >gi|109072481|ref|XP_001090737.1| PREDICTED: similar to Ras-related protein Rab-32 [Macaca mulatta] Length = 624 Score = 59.3 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 68/197 (34%), Gaps = 47/197 (23%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GKT+I+ R++ + + + T+ +++ + + LW++ G Sbjct: 427 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFA-LKVLNWDSRTLVRLQLWDIAGQE 485 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 ++ ++ +V D+S+ + E + ++V Sbjct: 486 RFGNMTRV-----YYKEAVGAFVVFDISRSSTF-EAVLKWKSDLDSKVH----------- 528 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 L + P+P +++ +K D Q+ DS + + Sbjct: 529 --------------------LPNGSPIPAVLLANKCD--QNKDSSQ---TPSQMDQFCKE 563 Query: 219 YG-ASLIFTSSKSETTM 234 +G A TS+K + Sbjct: 564 HGFAGWFETSAKDNINI 580 >gi|15236081|ref|NP_195699.1| AtRABH1c (Arabidopsis Rab GTPase homolog H1c); GTP binding [Arabidopsis thaliana] gi|13272477|gb|AAK17177.1|AF325109_1 small GTP-binding protein-like [Arabidopsis thaliana] gi|14423430|gb|AAK62397.1|AF386952_1 small GTP-binding protein-like [Arabidopsis thaliana] gi|4490740|emb|CAB38902.1| small GTP-binding protein-like [Arabidopsis thaliana] gi|7271044|emb|CAB80652.1| small GTP-binding protein-like [Arabidopsis thaliana] gi|23197670|gb|AAN15362.1| small GTP-binding protein-like [Arabidopsis thaliana] Length = 214 Score = 59.3 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 72/211 (34%), Gaps = 50/211 (23%) Query: 42 VFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + F+G ++ GKT+I+ RF+ + D T +PT+ +++ T LW+ G Sbjct: 12 LVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTV--RLQLWDTAGQE 69 Query: 100 SLSDLVQIPITADNVSFLSVVLVL-DLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 L+ + SV +V+ D+S T + + R + + Sbjct: 70 RFRSLI-----PSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVI------- 117 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ EKR+V Sbjct: 118 ----------------------------IVLVGNKTDLV-----EKRQVSISEGEDKGKE 144 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTE 249 YG I TS+K + I G + Sbjct: 145 YGVMFIETSAKENFNIKALFRKIAAALPGVD 175 >gi|74831376|emb|CAI39292.1| rab_C68 [Paramecium tetraurelia] Length = 174 Score = 58.6 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 13/144 (9%) Query: 42 VFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G GKT ++ RF ++ + +KPT+ +E+ F R A +W+ G Sbjct: 13 IIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFF--RHIDIMGKTIKAQVWDTAGQE 70 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 IT ++ D++K + E + R + + + Sbjct: 71 KFR-----AITYGYYRGALGAMICYDITKEQSFLNV-ERWIEELREHGDSNLVMMLIGTK 124 Query: 159 SRSGKQRVPRVLHKDYPDRELISP 182 S +RV R +D + L Sbjct: 125 SDLESKRVVRN--EDGTQKALQHN 146 >gi|145533477|ref|XP_001452483.1| hypothetical protein GSPATT00002485001 [Paramecium tetraurelia strain d4-2] gi|124420182|emb|CAK85086.1| unnamed protein product [Paramecium tetraurelia] Length = 215 Score = 58.2 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 13/144 (9%) Query: 42 VFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G GKT ++ RF ++ + +KPT+ +E+ F R A +W+ G Sbjct: 13 IIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFF--RHIDIMGKTIKAQVWDTAGQE 70 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 IT ++ D++K + E + R + + + Sbjct: 71 KFR-----AITYGYYRGALGAMICYDITKEQSFLNV-ERWIEELREHGDSNLVMMLIGTK 124 Query: 159 SRSGKQRVPRVLHKDYPDRELISP 182 S +RV R +D + L Sbjct: 125 SDLESKRVVRN--EDGTQKALQHN 146 >gi|19114161|ref|NP_593249.1| GTPase Ryh1 [Schizosaccharomyces pombe] gi|134131|sp|P17608|RYH1_SCHPO GTP-binding protein ryh1 gi|5077|emb|CAA36715.1| ryh1 [Schizosaccharomyces pombe] gi|2330800|emb|CAB11173.1| GTPase Ryh1 [Schizosaccharomyces pombe] Length = 201 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 23/147 (15%) Query: 42 VFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + F+G ++ GKT+++ RF+ + D T + T+ +++ T LW+ G Sbjct: 14 LVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDTAGQE 71 Query: 100 SLSDLVQIPITADNVSFLSV-VLVLDLSKPNALWETMESLLGSAR-NQVEKVCA------ 151 L+ + SV ++V D++ N+ T E + R + + V Sbjct: 72 RFRSLI-----PSYIRDSSVAIIVYDITNHNSFVNT-EKWIEDVRAERGDDVIIVLVGNK 125 Query: 152 -----ALQKTGESRSGKQRVPRVLHKD 173 Q T E K + +++H + Sbjct: 126 TDLADKRQVTQEEGEKKAKELKIMHME 152 >gi|145510136|ref|XP_001441001.1| hypothetical protein GSPATT00009876001 [Paramecium tetraurelia strain d4-2] gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia] gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia] Length = 205 Score = 57.8 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 79/232 (34%), Gaps = 55/232 (23%) Query: 42 VFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDI-AHLWELGGG 98 + +G GKT IL +F + + +K T+ +E+ K I A +W+ G Sbjct: 14 LVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFA---SKNVILDDKTIKAQIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +++ D++K E ++ + + + Sbjct: 71 ERYR-----AITSAYYRGAVGAMIIYDITKSLTF-ENVDKWMKELKENAD---------- 114 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 P + ++IVG+K D R+V A Sbjct: 115 -----------------PSLQ--------IMIVGNKTDQKH-----IRQVATDCAIAYAQ 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 G + I TS+K T + + I Q + + + + P+K + A +D Sbjct: 145 RNGVAFIETSAKDGTNVEDAFKNILQQIYKSAKVVKPTPQPTK--FVVADTD 194 >gi|160705425|gb|EAT89750.2| hypothetical protein SNOG_03019 [Phaeosphaeria nodorum SN15] Length = 470 Score = 57.4 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 20/143 (13%) Query: 146 VEKVCAALQKTGES--RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFD-- 201 +E+ LQ G S G + V E P +PL +V D + + Sbjct: 116 LEENIQLLQDKGRSLGAEGTSSMEDV-KIPLGPGEWDEPLGIPLCVVCQNADKIESLEKE 174 Query: 202 ----SEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTER------P 251 E+ I + LR + +G+SL++T + ++ + G + Sbjct: 175 RGWKEEEFDFILQYLRTILLKHGSSLVYTMPTAPGSL----QTLIHSTLGIKSLLKQEQL 230 Query: 252 KSISTDPSKPLAIPAGSDSLSQI 274 + TD + + +P DS ++I Sbjct: 231 RHNVTDRDR-VLVPPNWDSWAKI 252 >gi|123456026|ref|XP_001315752.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121898438|gb|EAY03529.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 195 Score = 57.4 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 67/163 (41%), Gaps = 44/163 (26%) Query: 42 VFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G G+T +++R+ + E KPT+ Y + ++ + +LW+ G Sbjct: 9 IVTIGDHGVGQTCLIMRYYYGEFQENPKPTVGAAYVKVKAEANNHQVQ--LNLWDTAGQE 66 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 S+L+ PI N +V++ DL++ ++Q++KV A + ES Sbjct: 67 KYSNLI--PIYVQNCH--AVIICYDLTE---------------KDQLQKVQAFINTAHES 107 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDS 202 + VP+++VG+K D F+ + Sbjct: 108 CPPE---------------------VPIVVVGTKSDKFEGQNP 129 >gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 10895] gi|44986287|gb|AAS54747.1| AGR257Cp [Ashbya gossypii ATCC 10895] Length = 220 Score = 57.4 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 49/116 (42%), Gaps = 13/116 (11%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDI-A 90 S+ + F+G + GKT+++ RF+ D+ + T+ +++ + + I Sbjct: 7 NKTLSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFL---SKTVYLDDRTIRL 63 Query: 91 HLWELGGGISLSDLVQIPITADNVSFLSVVLVL-DLSKPNALWETMESLLGSARNQ 145 LW+ G L+ + V +V+ D++ + E ++ + RN+ Sbjct: 64 QLWDTAGQERFRSLI-----PSYIRDSHVAIVVYDITNKKSF-EYIDKWVEDVRNE 113 >gi|145549438|ref|XP_001460398.1| hypothetical protein GSPATT00003870001 [Paramecium tetraurelia strain d4-2] gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia] gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia] Length = 205 Score = 57.4 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 79/232 (34%), Gaps = 55/232 (23%) Query: 42 VFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDI-AHLWELGGG 98 + +G GKT IL +F + + +K T+ +E+ K + A +W+ G Sbjct: 14 LVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFA---SKNIMIDDKTVKAQIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +++ D++K E ++ + + + Sbjct: 71 ERYR-----AITSAYYRGAVGAMIIYDITKSLTF-ENVDKWMKELKENAD---------- 114 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 P + ++IVG+K D R+V A Sbjct: 115 -----------------PSLQ--------IMIVGNKTDQKH-----IRQVATDCAIAYAQ 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 G + I TS+K T + + I Q + + + + P+K + A +D Sbjct: 145 RNGVAFIETSAKDGTNVEDAFKNILQQIYKSAKVVKPTPQPTK--FVVADTD 194 >gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ustilago maydis 521] gi|46101753|gb|EAK86986.1| hypothetical protein UM06104.1 [Ustilago maydis 521] Length = 219 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 77/212 (36%), Gaps = 51/212 (24%) Query: 42 VFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + F+G ++ GKT+++ RF+ D T + T+ +++ T LW+ G Sbjct: 6 LVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDTAGQE 63 Query: 100 SLSDLVQIPITADNVSFLSVVLVL-DLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 L+ + SV +V+ D++ + T + R Sbjct: 64 RFRSLI-----PSYIRDSSVAVVVYDITNRASFQNT-SKWVDDVRA-------------- 103 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +R V+ +++VG+K D+ S+KR+V + A Sbjct: 104 -----ERGNDVI----------------IVLVGNKTDL-----SDKRQVTTEEAEKKAQE 137 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTER 250 + I TS+K+ + I Q G ++ Sbjct: 138 FNVMFIETSAKAGHNVKVLFKKIAQALPGMDK 169 >gi|123506780|ref|XP_001329276.1| Ras family protein [Trichomonas vaginalis G3] gi|62736244|gb|AAX97451.1| small Rab GTPase Rab6a [Trichomonas vaginalis] gi|121912229|gb|EAY17053.1| Ras family protein [Trichomonas vaginalis G3] Length = 202 Score = 57.4 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 80/233 (34%), Gaps = 57/233 (24%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDETAK--PTLALEYTFGRRARGHNTPKDI-AHLWELG 96 + F+G + GKT+I+ +++ T + T+ ++Y + K I +W+ Sbjct: 10 HKIIFIGDSSVGKTSIINQYIYNSCTPQYNSTIGIDYL---SKIVNEADKPIQLQIWDTA 66 Query: 97 GGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 G L+ I + + VLV D++ + + +++ N E Sbjct: 67 GQEKFHSLIPAYIRSSTI----AVLVYDITCKQSF-DNIQTWYQMVINNAEPAF------ 115 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +IVG+K D+ DSE+ I + + A Sbjct: 116 -------------------------------IIVGNKSDL----DSERANSIEEG-KKFA 139 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 + A I TS+ + +S+ I Q P K + I SD Sbjct: 140 NQINAKFIETSAITSENISQLFDIIIQ----IPIPVEEVAQEEKQVMITIPSD 188 >gi|70998112|ref|XP_753786.1| dynein family protein [Aspergillus fumigatus Af293] gi|66851422|gb|EAL91748.1| dynein family protein [Aspergillus fumigatus Af293] Length = 307 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 15/103 (14%) Query: 183 FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSK 236 +P+ +V D + E+ I + +R + +GASLI+T++ + Sbjct: 42 LGIPMCVVCQGADKIEKLEKDHGWREEEFDFILQFMRTILLKHGASLIYTTA---FLANS 98 Query: 237 SRSFI-----NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 +S I + K D K + +P DS +I Sbjct: 99 LQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPPNWDSWGKI 140 >gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HOMOLOG A2A); GTP binding [Arabidopsis thaliana] gi|3024516|sp|O04486|RB11C_ARATH Ras-related protein Rab11C gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene. [Arabidopsis thaliana] gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana] gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana] gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana] gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana] Length = 217 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 82/232 (35%), Gaps = 69/232 (29%) Query: 42 VFFMGSKAGGKTTILLRFLERDE---TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF R+E +K T+ +E+ T K A +W+ G Sbjct: 15 VVLIGDSGVGKSNLLSRF-TRNEFCLESKSTIGVEFATRTLQVEGRTVK--AQIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++KP T E++ + Sbjct: 72 ERYR-----AITSAYYRGALGALLVYDVTKP----TTFENVSRWLKEL------------ 110 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL-- 215 +D+ D ++ ++++G+K D+ K LR + Sbjct: 111 --------------RDHADSNIV------IMLIGNKTDL-------------KHLRAVAT 137 Query: 216 --AHFY----GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKP 261 A Y G S I TS+ + K+ I + KSIS+D + Sbjct: 138 EDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTA 189 >gi|123479672|ref|XP_001322993.1| Ras family protein [Trichomonas vaginalis G3] gi|62736318|gb|AAX97488.1| small Rab GTPase RabX11 [Trichomonas vaginalis] gi|121905849|gb|EAY10770.1| Ras family protein [Trichomonas vaginalis G3] Length = 210 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 49/198 (24%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G GKT+++ RF+E E K T+ ++ F + + K LW++ G Sbjct: 16 IIVVGDMGTGKTSMIRRFVEGNFSEFYKITIGVD--FANKIITADGVKCDIQLWDIAGQE 73 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 +T ++V D+++P+ + ++ + Q + Sbjct: 74 RF-----GSMTGVYYRESVGAIVVFDITRPSTF--------EMTKIWMDDI----QAKVQ 116 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 + +G+ VP L++G+K D+ E + ++ A Sbjct: 117 TSAGE--------------------AVPTLLIGNKIDL----KPENWGNKTEEMQKYAEE 152 Query: 219 YGASLIF--TSSKSETTM 234 L + TS+K T + Sbjct: 153 NH-YLQYFETSAKDGTNL 169 >gi|123411399|ref|XP_001303883.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121885295|gb|EAX90953.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 193 Score = 56.7 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 10/113 (8%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAH 91 P + V +G GKT+I+ + + + T+A Y R + + Sbjct: 5 ETVPEGK-VIVVGCAGVGKTSIINMYTTKSFASDTQSTIAATYVQMRVLTERGEV--VLN 61 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARN 144 LW+ G L+ P+ + N + ++V DL+ ++L + E+ ++ Sbjct: 62 LWDTAGQERFKSLI--PMYSRN--SSAAIIVTDLTNHDSLVQG-ENWYKMVKD 109 >gi|145487073|ref|XP_001429542.1| hypothetical protein GSPATT00032376001 [Paramecium tetraurelia strain d4-2] gi|74831315|emb|CAI39281.1| rab_B69 [Paramecium tetraurelia] gi|124396635|emb|CAK62144.1| unnamed protein product [Paramecium tetraurelia] Length = 226 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 68/204 (33%), Gaps = 53/204 (25%) Query: 42 VFFMGSKAGGKTTILLRFLE---RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 +G GK+ +LL+F + R+E T+ +E FG R N + +W+ G Sbjct: 10 FIIVGDTNVGKSCLLLQFTDSRFRNEH-DATIGVE--FGSRNLKINDKQIKLQIWDTAGQ 66 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 S IT +LV D++ + E ++ Sbjct: 67 ESFKS-----ITRSYYRGSIGGILVFDVTSRQSF-EDLQKWYQEI--------------- 105 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 + + ++IVG+K D+ E+R+V + R A Sbjct: 106 -QGYACDK-------------------IEMVIVGNKIDL-----EERREVKTEEARRYAQ 140 Query: 218 FYGASLIFTSSKSETTMSKSRSFI 241 G + TS+K+ + + Sbjct: 141 KQGFAYFETSAKTGENVDNVFETM 164 >gi|115752504|ref|XP_001178826.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115955512|ref|XP_001180781.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 236 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 73/225 (32%), Gaps = 58/225 (25%) Query: 26 EEEAEEEDAHFPSQRT-----VFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGR 78 +E+A A P+ + + +G GKT + RF + E + T+ +++ Sbjct: 5 KEQANGRGATDPNDKNRRIFKIIVIGDSNVGKTCLTYRFCGGEFPEKTEATIGVDFREKN 64 Query: 79 RARGHNTPKDIAHLWELGGGISL-SDLVQIPITADNVSFL-SVVLVLDLSKPNALWETME 136 T K LW+ G +VQ + +V+ V D++K + E++ Sbjct: 65 VTIEGETVK--LQLWDTAGQERFRKSMVQ-----HYYRNVHAVIFVYDVTKMSTF-ESLP 116 Query: 137 SLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDI 196 + + + + P ++VG+K D Sbjct: 117 TWIDECDRH----------SLSPDT------------------------PRVLVGNKCD- 141 Query: 197 FQDFDSEKRKVICKTL-RFLAHFYGASLIFTSSKSETTMSKSRSF 240 RKV+ + + + T++K E K + Sbjct: 142 -----MADRKVVTSGIAQKFSDANNMPFFETAAKLEEEGDKINNV 181 >gi|118085220|ref|XP_425653.2| PREDICTED: similar to RAB38 [Gallus gallus] Length = 212 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 74/225 (32%), Gaps = 46/225 (20%) Query: 42 VFFMGSKAGGKTTILLRF--LERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G GKT+I+ R+ + T+ +++ + LW++ G Sbjct: 13 LLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFA-LKVLSWDAETVVRLQLWDIAGQE 71 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 ++ ++ + +V D+++P E + K+ K Sbjct: 72 RFGNMTRVYYR----EAMGAFIVFDVTRPATF-EAVTKWKEDLD---SKLVLPNGK---- 119 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 PVP +++ +K D Q D I + Sbjct: 120 ------------------------PVPTVLLANKCD--QGIDVLMNNGI--KMDQFCKEN 151 Query: 220 G-ASLIFTSSKSETTMSK-SRSFINQ-LAFGTERPKSISTDPSKP 261 G TS+K +++ SR + +A ++ + I TD KP Sbjct: 152 GFVGWFETSAKENININEASRCLVKHIIATESDPVQPIETDIIKP 196 >gi|146079375|ref|XP_001463770.1| small GTP-binding protein Rab7, putative [Leishmania infantum JPCM5] gi|134067857|emb|CAM66138.1| small GTP-binding protein Rab7, putative [Leishmania infantum] Length = 222 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 71/210 (33%), Gaps = 57/210 (27%) Query: 42 VFFMGSKAGGKTTILLRFLERDETAK--PTLALEYTFGRRARGHNTPKDI-AHLWELGGG 98 + +GS + GK+ I RF + PTL +++ + P+ + +W+ G Sbjct: 9 IIVIGSVSVGKSNITSRFCDGAFYPDLVPTLGMDFKYSSCNTLEKRPRCVRLQVWDTSGQ 68 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 + +T +L DL+ + E ++ Sbjct: 69 DDF-----VTLTTAFYRNCQGALLCFDLTNRQSF-EDLDQWYERL--------------- 107 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRK--VICKTLRFL 215 E SP PL++VG K D+ + E+ + V+ R + Sbjct: 108 --------------------ERYSPVVPPLILVGCKLDLVESHLDEQGEGIVLGSH-RQI 146 Query: 216 AHF-------YGASLIF--TSSKSETTMSK 236 A Y + L + TS+K T +S+ Sbjct: 147 AKSEADAWARYHSCLCYLETSAKENTNVSQ 176 >gi|156392743|ref|XP_001636207.1| predicted protein [Nematostella vectensis] gi|156223308|gb|EDO44144.1| predicted protein [Nematostella vectensis] Length = 221 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 60/172 (34%), Gaps = 49/172 (28%) Query: 43 FFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDI-AHLWELGGGI 99 +G A GKT+++ RF D K T+ +++ R ++ +W+ G Sbjct: 37 IVLGDVAVGKTSLINRFCRNAFDHDYKATIGVDF---EVERFKILDQEFNMQIWDTAGQE 93 Query: 100 SLSDLVQIPITADNVSFLSVVL-VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 + A V++ V DLS+ ++E+ ++ Sbjct: 94 RFK-----CMAAAYYRAAHVIILVFDLSRS----RSLENTRIWLDEALQSN--------- 135 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQ--DFDSEKRKVI 208 +YPD + +VG+K D+ + DFD + + I Sbjct: 136 ------------PSNYPD----------IFLVGTKSDLCKCSDFDQMEMRAI 165 >gi|1388197|gb|AAB02833.1| low-Mr GTP-binding protein Rab32 [Homo sapiens] Length = 210 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 68/197 (34%), Gaps = 47/197 (23%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GKT+I+ R++ + + + T+ +++ + + LW++ G Sbjct: 13 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFA-LKVLNWDSRTLVRLQLWDIAGQE 71 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 ++ ++ +V D+S+ + E + ++V Sbjct: 72 RFGNMTRV-----YYKEAVGAFVVFDISRSSTF-EAVLKWKSDLDSKVH----------- 114 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 L + P+P +++ +K D Q+ DS + + Sbjct: 115 --------------------LPNGSPIPAVLLANKCD--QNKDSSQSP---SQVDQFCKE 149 Query: 219 YG-ASLIFTSSKSETTM 234 +G A TS+K + Sbjct: 150 HGFAGWFETSAKDNINI 166 >gi|46130840|ref|XP_389151.1| hypothetical protein FG08975.1 [Gibberella zeae PH-1] Length = 267 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 70/177 (39%), Gaps = 45/177 (25%) Query: 44 FMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GKT+++++++E DE TL + F + + +W+LGG Sbjct: 109 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVN--FMEKTISIRNTEITFSIWDLGGQREF 166 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +++ P+ ++ ++++ + DL++ + L +++ R Sbjct: 167 VNML--PLVCNDA--VAILFMFDLTRKSTL-NSIKEWYRQGR------------------ 203 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 G + +P+ +VG+K+D F +F + ++ I + + Sbjct: 204 GFNKTA-----------------IPI-LVGTKYDHFVNFPPQDQEEISNQIFKIVLS 242 >gi|54696892|gb|AAV38818.1| RAB32, member RAS oncogene family [synthetic construct] gi|61366667|gb|AAX42890.1| RAB32 member RAS oncogene family [synthetic construct] Length = 226 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 68/197 (34%), Gaps = 47/197 (23%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GKT+I+ R++ + + + T+ +++ + + LW++ G Sbjct: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFA-LKVLNWDSRTLVRLQLWDIAGQE 86 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 ++ ++ +V D+S+ + E + ++V Sbjct: 87 RFGNMTRV-----YYKEAVGAFVVFDISRSSTF-EAVLKWKSDLDSKVH----------- 129 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 L + P+P +++ +K D Q+ DS + + Sbjct: 130 --------------------LPNGSPIPAVLLANKCD--QNKDSSQSP---SQVDQFCKE 164 Query: 219 YG-ASLIFTSSKSETTM 234 +G A TS+K + Sbjct: 165 HGFAGWFETSAKDNINI 181 >gi|5803133|ref|NP_006825.1| RAB32, member RAS oncogene family [Homo sapiens] gi|2833245|sp|Q13637|RAB32_HUMAN Ras-related protein Rab-32 gi|20379092|gb|AAM21106.1|AF498958_1 small GTP binding protein RAB32 [Homo sapiens] gi|1575792|gb|AAB09599.1| low Mr GTP-binding protein Rab32 [Homo sapiens] gi|13445272|emb|CAC34968.1| RAB32, member RAS oncogene family [Homo sapiens] gi|15929226|gb|AAH15061.1| RAB32, member RAS oncogene family [Homo sapiens] gi|54696894|gb|AAV38819.1| RAB32, member RAS oncogene family [Homo sapiens] gi|61356867|gb|AAX41298.1| RAB32 member RAS oncogene family [synthetic construct] gi|119568218|gb|EAW47833.1| RAB32, member RAS oncogene family [Homo sapiens] gi|123987477|gb|ABM83808.1| RAB32, member RAS oncogene family [synthetic construct] gi|123999094|gb|ABM87130.1| RAB32, member RAS oncogene family [synthetic construct] Length = 225 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 68/197 (34%), Gaps = 47/197 (23%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GKT+I+ R++ + + + T+ +++ + + LW++ G Sbjct: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFA-LKVLNWDSRTLVRLQLWDIAGQE 86 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 ++ ++ +V D+S+ + E + ++V Sbjct: 87 RFGNMTRV-----YYKEAVGAFVVFDISRSSTF-EAVLKWKSDLDSKVH----------- 129 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 L + P+P +++ +K D Q+ DS + + Sbjct: 130 --------------------LPNGSPIPAVLLANKCD--QNKDSSQSP---SQVDQFCKE 164 Query: 219 YG-ASLIFTSSKSETTM 234 +G A TS+K + Sbjct: 165 HGFAGWFETSAKDNINI 181 >gi|85014147|ref|XP_955569.1| GTP-binding protein [Encephalitozoon cuniculi GB-M1] gi|19171263|emb|CAD26988.1| GTP-BINDING PROTEIN [Encephalitozoon cuniculi GB-M1] Length = 217 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 11/110 (10%) Query: 42 VFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGR-RARGHNTPKDIAHLWELGGG 98 + F+GS GKTT++ ++L E ++ PT+ L++ GH LW+ G Sbjct: 26 IVFLGSSNVGKTTLMSQYLHQEVQKSYGPTIGLDFVSTTIVVSGHRV---RLQLWDTAGQ 82 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 + ++ ++V D+ + E+++ + + + Sbjct: 83 ERFNSIIPNYTRNS----FLAIIVFDMKDKGSF-ESIDHWINTLTKANDS 127 >gi|73987970|ref|XP_850212.1| PREDICTED: similar to Rab38, member of RAS oncogene family [Canis familiaris] Length = 285 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 65/201 (32%), Gaps = 52/201 (25%) Query: 42 VFFMGSKAGGKTTILLRF--LERDETAKPTLALEYTFGRRARGHNTPKDIA--HLWELGG 97 + +G GKT+I+ R+ + T+ +++ H P+ + LW++ G Sbjct: 86 LLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFAL---KVLHWDPETVVRLQLWDIAG 142 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 ++ ++ + +V D+++P E + K+ K Sbjct: 143 QERFGNMTRVYYR----EAMGAFIVFDVTRPATF-EAVTKWKNDLD---SKLSLPNGK-- 192 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR--FL 215 PV ++++ +K D +D +I L+ Sbjct: 193 --------------------------PVSVVLLANKCDQGKDV------LINNGLKMDQF 220 Query: 216 AHFYG-ASLIFTSSKSETTMS 235 +G TS+K + Sbjct: 221 CKEHGFVGWFETSAKENINID 241 >gi|118365218|ref|XP_001015830.1| Ras family protein [Tetrahymena thermophila SB210] gi|89297597|gb|EAR95585.1| Ras family protein [Tetrahymena thermophila SB210] Length = 227 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Query: 34 AHFPSQRT-VFFMGSKAGGKTTILLRF----LERDETAKPTLALEYTFGRRARGHNTPKD 88 P + + F+G ++ GKT+I+ RF E +PT+ +++ K Sbjct: 5 TTGPVVKFKIVFLGDQSVGKTSIINRFIYDNFTGSE--QPTVGIDFIC---KTLQMDNKT 59 Query: 89 -IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 LW+ G L+ I N ++V D++ N+ + + + Sbjct: 60 LRLQLWDTAGQERFKSLIPSYIRDSNA----AIIVYDITNQNSFSNV-TKWVEEVKEE 112 >gi|157343673|emb|CAO68179.1| unnamed protein product [Vitis vinifera] Length = 218 Score = 56.3 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 13/106 (12%) Query: 43 FFMGSKAGGKTTILLRFLERDE---TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 +G A GK+ +L RF RDE +KPT+ +E+ + G K A +W+ G Sbjct: 17 VLIGDSAVGKSNLLSRF-SRDEFRLDSKPTIGVEFAYRNIKVGDKLIK--AQIWDTAGQE 73 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARN 144 IT+ +LV D+++ E ++ L R+ Sbjct: 74 RFR-----AITSSYYRGALGALLVYDITRRATF-ENLKKWLRELRD 113 >gi|78057535|gb|ABB17267.1| secretion related GTPase C [Aspergillus niger] Length = 210 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 55/211 (26%) Query: 42 VFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + F+G ++ GKT+++ RF+ D T + T+ +++ T LW+ G Sbjct: 19 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDTAGQE 76 Query: 100 SLSDLVQIPITADNVSFLSVVLVL-DLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 L+ + SV +V+ D+S + T + R Sbjct: 77 RFRSLI-----PSYIRDSSVAVVVYDISNAKSFQNT-RKWIDDVR--------------- 115 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 + D V +++VG+K D+ ++KR+V A Sbjct: 116 ------------GERGND--------VIIVLVGNKTDL-----NDKREVTTAQGEEEAKK 150 Query: 219 YGASLIF--TSSKSETTMSKSRSFINQLAFG 247 G L+F TS+K + + I Q G Sbjct: 151 NG--LMFIETSAKVGHNVKQLFRRIAQALPG 179 >gi|156844455|ref|XP_001645290.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM 70294] gi|156115950|gb|EDO17432.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM 70294] Length = 208 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 75/228 (32%), Gaps = 46/228 (20%) Query: 42 VFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GKT+++ R++ + + K T+ ++ + +W+ G Sbjct: 11 VIVLGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVT-VDDDKAATMQVWDTAGQE 69 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 L + VLV D++ + Sbjct: 70 RFQSLGVAFYRGAD----CCVLVYDVTNSKSFENI------------------------- 100 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 + R + + SP P +I+G+K D+ + K+ V K+ + LA Sbjct: 101 -----KSWRDEFLIHA--NVSSPETFPFVILGNKIDV----EDSKKIVTQKSAQELAKEL 149 Query: 220 G-ASLIFTSSKSETTMSKSRSFI--NQLAFGTERPKSISTDPSKPLAI 264 G L TS+K+ + ++ I + L + D + + I Sbjct: 150 GDVPLFLTSAKNAINVDQAFEEIARSALQQNQADADAFEDDFNDAINI 197 >gi|67465559|ref|XP_648952.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS] gi|67469827|ref|XP_650887.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS] Length = 236 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 74/209 (35%), Gaps = 51/209 (24%) Query: 14 AAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER--DETAKPTLA 71 V R+ + + +G + GKT+ + +F + ++ +PT+ Sbjct: 15 KKIVNKRKKEETNNFSLRLK--------IIVVGDPSSGKTSSIHQFCDGIFEDNYQPTIG 66 Query: 72 LEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNAL 131 +E++ N + LW++ G + + ++ L +++ D++ N Sbjct: 67 VEFSSKFITVNTNEVELR--LWDIAGQDHYAGMSRVYYNG----ALGGLVMCDVTN-NTS 119 Query: 132 WETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVG 191 E ++ + DR L + +P+L++G Sbjct: 120 IEGVKKW--------------------------------KANIDDRVLFNNEKIPVLLIG 147 Query: 192 SKFDIFQDFDSEKRKVICKTLRFLAHFYG 220 +K D+ + E++ L+ +A+ G Sbjct: 148 NKADLLK--TDEEKDAAAAKLKEIANSNG 174 >gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (japonica cultivar-group)] gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa (japonica cultivar-group)] gi|125550513|gb|EAY96222.1| hypothetical protein OsI_017455 [Oryza sativa (indica cultivar-group)] gi|125592518|gb|EAZ32577.1| hypothetical protein OsJ_016060 [Oryza sativa (japonica cultivar-group)] Length = 220 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 75/229 (32%), Gaps = 69/229 (30%) Query: 42 VFFMGSKAGGKTTILLRFLERDE---TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF R+E +K T+ +E+ K A +W+ G Sbjct: 17 VVLIGDSGVGKSNLLSRF-TRNEFCLESKSTIGVEFATRTLHVEGKIIK--AQIWDTAGQ 73 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ VLV D+SKP + + L R Sbjct: 74 ERYR-----AITSAYYRGALGAVLVYDVSKPTTF-DNISRWLKELR-------------- 113 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR---- 213 D+ D + +++VG+K D+ K LR Sbjct: 114 ---------------DHADAN------IRIMLVGNKTDL-------------KHLRAVAT 139 Query: 214 ----FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 A G S I TS+ T + ++ I + K +++D Sbjct: 140 DDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVASDE 188 >gi|72392985|ref|XP_847293.1| small GTP-binding protein Rab7, putative [Trypanosoma brucei TREU927] gi|1877404|emb|CAA68210.1| rab7 [Trypanosoma brucei] gi|62176473|gb|AAX70580.1| small GTP-binding protein Rab7, putative [Trypanosoma brucei] gi|70803323|gb|AAZ13227.1| small GTP-binding protein Rab7, putative [Trypanosoma brucei] Length = 219 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 40/108 (37%), Gaps = 10/108 (9%) Query: 42 VFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDI-AHLWELGGG 98 + +G GK+ I RF + + PT+ +++ + + I +W+ G Sbjct: 9 IIVIGDVGVGKSNISSRFCDSIYYDDIVPTIGVDFKYCHTTTLEKHARTILLQIWDTSGQ 68 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQ 145 + +T ++ DL+ ++ E +++ R+ Sbjct: 69 DRF-----VSLTTAYYRNCHGALICFDLTNRSSF-EGIDAWFERLRSH 110 >gi|145251179|ref|XP_001397103.1| hypothetical protein An15g05740 [Aspergillus niger] gi|134082633|emb|CAK42527.1| unnamed protein product [Aspergillus niger] Length = 209 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 55/211 (26%) Query: 42 VFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + F+G ++ GKT+++ RF+ D T + T+ +++ T LW+ G Sbjct: 19 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDTAGQE 76 Query: 100 SLSDLVQIPITADNVSFLSVVLVL-DLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 L+ + SV +V+ D+S + T + R Sbjct: 77 RFRSLI-----PSYIRDSSVAVVVYDISNAKSFQNT-RKWIDDVR--------------- 115 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 + D V +++VG+K D+ ++KR+V A Sbjct: 116 ------------GERGND--------VIIVLVGNKTDL-----NDKREVTTAQGEEEAKK 150 Query: 219 YGASLIF--TSSKSETTMSKSRSFINQLAFG 247 G L+F TS+K + + I Q G Sbjct: 151 NG--LMFIETSAKVGHNVKQLFRRIAQALPG 179 >gi|123402494|ref|XP_001302063.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|123499207|ref|XP_001327567.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|62736306|gb|AAX97482.1| small Rab GTPase RabX4 [Trichomonas vaginalis] gi|121883314|gb|EAX89133.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121910498|gb|EAY15344.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 201 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 82/229 (35%), Gaps = 57/229 (24%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G GKT+++ RF+E D++ TL ++F + HN K I ++W+ G Sbjct: 14 ITVLGEYFVGKTSVINRFVEGTFDDSYSATLG--FSFLSKELTHNNTKYILNIWDTSGSE 71 Query: 100 SLSDLVQIPITADNVSFL-SVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 + + +LV DL+ + E++E G ++ +K Sbjct: 72 RYRS-----VAPNYYRGSDGCILVYDLTN-HKSLESLEFWYGEFKSLAQKNGIQQ----- 120 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA-- 216 VP L++G+K D+ D K I A Sbjct: 121 --------------------------VPALLIGNKSDLVYD------KEILLAAEKFAQE 148 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIP 265 H SLI TS+ + + + ++ + L S D +++ Sbjct: 149 HEISKSLI-TSAVNGSNIDETFLAMVDLC------SSHQRDQFDQISLT 190 >gi|123406273|ref|XP_001302762.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121884082|gb|EAX89832.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 155 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 75/201 (37%), Gaps = 54/201 (26%) Query: 33 DAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIA 90 D+ P + V +G GKT+++ RF + E A T+ Y + I Sbjct: 2 DSDIPEFK-VVTVGDSGVGKTSLVKRFSDGVFTEGAATTIGAAYV---KVDVVIANSPIC 57 Query: 91 -HLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKV 149 ++W+ G L+ + + + ++V+D+S+ ++ V + Sbjct: 58 LNIWDTAGQERFQSLIPLYLRSAQA----CIIVVDISQ---------------KDAVSNL 98 Query: 150 CAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVIC 209 VL +++ D I P + L++ G+K D+ D+D Sbjct: 99 ------------------NVLFENFKD---ILPQDICLVLAGNKKDLVPDYDPTP----- 132 Query: 210 KTLRFLAHFYGASLIFTSSKS 230 L A S IFTS+KS Sbjct: 133 --LLGWADKNKMSCIFTSAKS 151 >gi|123486327|ref|XP_001324695.1| Ras family protein [Trichomonas vaginalis G3] gi|121907582|gb|EAY12472.1| Ras family protein [Trichomonas vaginalis G3] Length = 198 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 73/211 (34%), Gaps = 52/211 (24%) Query: 42 VFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 V F+G GKT+I+ ++L+ D T+ T R N + +W+ G + Sbjct: 9 VVFVGDSTVGKTSIIHKYLKLDGEIPSTVGA--TSTRVDTIVNEKQLHLSVWDTAGQETF 66 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 +L +P+ A + + V+V D S +E + + V + Sbjct: 67 RNL--VPVYAKGAN--AAVIVFDQSNKQT-YEHVSGWYSYLQQHVGDII----------- 110 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDS-EKRKVICKTLRFLAHFYG 220 +++V +K D+ D D E + A + Sbjct: 111 -------------------------IIVVQNKCDLNCDIDQAEVFQW--------AEEHH 137 Query: 221 ASLIFTSSKSETTMSKSRSFINQLAFGTERP 251 +I TS+K T +S +++ + T Sbjct: 138 VQVISTSAKDGTGISSLFEILSKALYDTVFN 168 >gi|16741109|gb|AAH16409.1| RAB32, member RAS oncogene family [Mus musculus] gi|33585672|gb|AAH55945.1| RAB32, member RAS oncogene family [Mus musculus] Length = 223 Score = 55.9 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 34/237 (14%), Positives = 78/237 (32%), Gaps = 60/237 (25%) Query: 42 VFFMGSKAGGKTTILLRFLER--DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GKT+I+ R++ + + + T+ +++ + + LW++ G Sbjct: 26 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFA-LKVLNWDSRTLVRLQLWDIAGQE 84 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 ++ ++ +V D+S+ + + + ++V Sbjct: 85 RFGNMTRV-----YYKEALGAFVVFDISRSSTF-DAVLKWKNDLDSKVH----------- 127 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQD--FDSEKRKVICKTLRFLA 216 L + P+P +++ +K D +D + Sbjct: 128 --------------------LPNGSPIPAVLLANKCDQKKDNSQSPSQMD-------QFC 160 Query: 217 HFYGASLIF-TSSKSETTMS-----KSRSFI-NQLAFGTERPKSISTDPSKPLAIPA 266 +G S F TS+K + + + NQ +F + I D K + P Sbjct: 161 KDHGFSGWFETSAKDNINIDEATRFLVENMLANQQSF---PSEEIDLDRIKLVEEPP 214 >gi|83770344|dbj|BAE60477.1| unnamed protein product [Aspergillus oryzae] Length = 209 Score = 55.5 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 55/211 (26%) Query: 42 VFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + F+G ++ GKT+++ RF+ D T + T+ +++ T LW+ G Sbjct: 19 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDTAGQE 76 Query: 100 SLSDLVQIPITADNVSFLSVVLVL-DLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 L+ + SV +V+ D+S + T + R Sbjct: 77 RFRSLI-----PSYIRDSSVAVVVYDISNAKSFQNT-RKWIDDVR--------------- 115 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 + D V +++VG+K D+ ++KR+V A Sbjct: 116 ------------GERGND--------VIIVLVGNKTDL-----NDKREVTTAQGEEEAKK 150 Query: 219 YGASLIF--TSSKSETTMSKSRSFINQLAFG 247 G L+F TS+K + + I Q G Sbjct: 151 NG--LMFIETSAKVGHNVKQLFRRIAQALPG 179 >gi|71002422|ref|XP_755892.1| RAS small monomeric GTPase Rab6, putative [Aspergillus fumigatus Af293] gi|119481981|ref|XP_001261019.1| rab6 [Neosartorya fischeri NRRL 181] gi|66853530|gb|EAL93854.1| RAS small monomeric GTPase Rab6, putative [Aspergillus fumigatus Af293] gi|119409173|gb|EAW19122.1| rab6 [Neosartorya fischeri NRRL 181] Length = 207 Score = 55.5 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 55/211 (26%) Query: 42 VFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + F+G ++ GKT+++ RF+ D T + T+ +++ T LW+ G Sbjct: 18 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDTAGQE 75 Query: 100 SLSDLVQIPITADNVSFLSVVLVL-DLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 L+ + SV +V+ D+S + T + R Sbjct: 76 RFRSLI-----PSYIRDSSVAVVVYDISNAKSFQNT-RKWIDDVR--------------- 114 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 + D V +++VG+K D+ ++KR+V A Sbjct: 115 ------------GERGND--------VIIVLVGNKTDL-----NDKREVTTAQGEEEAKK 149 Query: 219 YGASLIF--TSSKSETTMSKSRSFINQLAFG 247 G L+F TS+K + + I Q G Sbjct: 150 NG--LMFIETSAKVGHNVKQLFRRIAQALPG 178 >gi|145504759|ref|XP_001438346.1| hypothetical protein GSPATT00000660001 [Paramecium tetraurelia strain d4-2] gi|74834286|emb|CAI44505.1| rab_A69 [Paramecium tetraurelia] gi|124405518|emb|CAK70949.1| unnamed protein product [Paramecium tetraurelia] Length = 226 Score = 55.5 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 68/204 (33%), Gaps = 53/204 (25%) Query: 42 VFFMGSKAGGKTTILLRFLE---RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 +G GK+ +LL+F + R+E T+ +E FG R N + +W+ G Sbjct: 10 FIIVGDTNVGKSCLLLQFTDSRFRNEH-DATIGVE--FGSRNLKINDKQIKLQIWDTAGQ 66 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 S IT +LV D++ + E ++ Sbjct: 67 ESFKS-----ITRSYYRGSIGGILVFDVTSRQSF-EDLQKWYQEI--------------- 105 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 + + ++IVG+K D+ ++R+V + R A Sbjct: 106 -QGYACDK-------------------IEMVIVGNKIDL-----EDRREVQTEEARKYAQ 140 Query: 218 FYGASLIFTSSKSETTMSKSRSFI 241 G + TS+K+ + + Sbjct: 141 KQGFAYFETSAKTGENVDNVFETM 164 >gi|157865487|ref|XP_001681451.1| small GTP-binding protein Rab7, putative [Leishmania major] gi|68124747|emb|CAJ03022.1| small GTP-binding protein Rab7, putative [Leishmania major] Length = 221 Score = 55.5 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 70/210 (33%), Gaps = 57/210 (27%) Query: 42 VFFMGSKAGGKTTILLRFLERDETAK--PTLALEYTFGRRARGHNTPKDI-AHLWELGGG 98 + +GS + GK+ I RF + PTL +++ + P+ + +W+ G Sbjct: 9 IIVIGSVSVGKSNITSRFCDGAFYPDLVPTLGMDFKYSSCNTLEKRPRCVRLQVWDTSGQ 68 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 + +T +L DL+ + E ++ Sbjct: 69 DDF-----VTLTTAFYRNCQGALLCFDLTNRQSF-EDLDQWYERL--------------- 107 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRK--VICKTLRFL 215 E SP PL++VG K D+ + E+ + V+ R + Sbjct: 108 --------------------ERYSPVVPPLILVGCKLDLVESHLDEQGEGIVLGSH-RQI 146 Query: 216 AHF-------YGASLIF--TSSKSETTMSK 236 A Y + L + TS+K +S+ Sbjct: 147 AKSEADAWARYHSCLCYLETSAKENRNVSQ 176 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermed... 402 e-110 gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light inter... 402 e-110 gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain is... 399 e-109 gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 ligh... 398 e-109 gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain i... 398 e-109 gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light int... 398 e-109 gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein... 398 e-109 gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Dan... 393 e-108 gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermed... 393 e-108 gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] 392 e-107 gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein... 387 e-106 gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 lig... 382 e-104 gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 ... 375 e-102 gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermed... 372 e-101 gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chai... 369 e-100 gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] 363 1e-98 gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] 348 3e-94 gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [S... 338 3e-91 gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella... 336 1e-90 gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibencla... 333 9e-90 gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon n... 324 6e-87 gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermed... 315 3e-84 gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin li... 312 2e-83 gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein li... 312 2e-83 gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light interme... 311 4e-83 gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermed... 311 4e-83 gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermedi... 311 5e-83 gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light int... 309 1e-82 gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculu... 309 2e-82 gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [D... 309 2e-82 gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light inte... 308 3e-82 gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A is... 308 3e-82 gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light ... 308 3e-82 gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermed... 308 4e-82 gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo s... 307 5e-82 gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] 307 5e-82 gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermed... 307 9e-82 gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light ... 307 9e-82 gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light... 306 2e-81 gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light interme... 306 2e-81 gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light int... 305 3e-81 gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermed... 305 4e-81 gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo s... 304 4e-81 gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermedi... 304 5e-81 gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 ... 304 7e-81 gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light int... 303 1e-80 gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-interm... 302 3e-80 gi|157119433|ref|XP_001653379.1| conserved hypothetical protein ... 302 3e-80 gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light ... 301 3e-80 gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 ... 301 6e-80 gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light inter... 300 9e-80 gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae s... 297 6e-79 gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-interm... 296 2e-78 gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon n... 295 4e-78 gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] 294 5e-78 gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light inte... 292 2e-77 gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] 291 5e-77 gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] 287 9e-76 gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Tr... 286 1e-75 gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate ... 286 1e-75 gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] 286 2e-75 gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light inte... 286 2e-75 gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic,... 283 1e-74 gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [G... 282 3e-74 gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon n... 280 9e-74 gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein... 280 1e-73 gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A... 278 4e-73 gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin li... 275 3e-72 gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein li... 275 4e-72 gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melano... 272 3e-71 gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated fa... 270 1e-70 gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosoph... 267 5e-70 gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] 267 9e-70 gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [... 266 2e-69 gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 ligh... 265 2e-69 gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoob... 262 2e-68 gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoob... 259 2e-67 gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Tr... 258 4e-67 gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] 255 3e-66 gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chai... 253 1e-65 gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella... 252 3e-65 gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00... 250 7e-65 gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938... 249 3e-64 gi|157128066|ref|XP_001661298.1| dynein light intermediate chain... 248 5e-64 gi|146097038|ref|XP_001468017.1| dynein light intermediate chain... 247 7e-64 gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, is... 247 9e-64 gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermedi... 246 1e-63 gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00... 242 4e-62 gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [S... 239 2e-61 gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermedi... 239 3e-61 gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermedia... 239 3e-61 gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermed... 238 4e-61 gi|157874331|ref|XP_001685649.1| dynein light intermediate chain... 238 4e-61 gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae s... 237 6e-61 gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 ... 234 6e-60 gi|154343515|ref|XP_001567703.1| dynein light intermediate chain... 234 1e-59 gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_002... 228 4e-58 gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light int... 227 1e-57 gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosoph... 200 1e-49 gi|119584836|gb|EAW64432.1| dynein, cytoplasmic 1, light interme... 182 5e-44 gi|158602493|gb|EDP38908.1| dynein light intermediate chain, put... 181 7e-44 gi|123423641|ref|XP_001306418.1| conserved hypothetical protein ... 180 1e-43 gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Tr... 175 3e-42 gi|39971217|ref|XP_366999.1| hypothetical protein MGG_03075 [Mag... 175 4e-42 gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light interme... 175 5e-42 gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermedi... 173 2e-41 gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain i... 171 5e-41 gi|121713178|ref|XP_001274200.1| dynein light intermediate chain... 171 6e-41 gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermed... 171 6e-41 gi|123415018|ref|XP_001304608.1| conserved hypothetical protein ... 170 2e-40 gi|116194005|ref|XP_001222815.1| hypothetical protein CHGG_06720... 168 6e-40 gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150... 167 8e-40 gi|157863075|gb|ABV90642.1| cytoplasmic dynein light intermediat... 166 1e-39 gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain fam... 166 2e-39 gi|119479611|ref|XP_001259834.1| conserved hypothetical protein ... 165 3e-39 gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [... 164 9e-39 gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT0001... 163 2e-38 gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] 163 2e-38 gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain fam... 162 4e-38 gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT0000... 160 1e-37 gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus... 159 2e-37 gi|67536988|ref|XP_662268.1| hypothetical protein AN4664.2 [Aspe... 159 2e-37 gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT0003... 159 3e-37 gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT0003... 158 6e-37 gi|115398722|ref|XP_001214950.1| conserved hypothetical protein ... 158 6e-37 gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Cop... 157 1e-36 gi|158290784|ref|XP_312349.4| AGAP002589-PA [Anopheles gambiae s... 155 3e-36 gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vini... 155 3e-36 gi|85002141|gb|ABC68472.1| Rab6A [Marsupenaeus japonicus] 153 2e-35 gi|146164455|ref|XP_001013126.2| Ras family protein [Tetrahymena... 153 2e-35 gi|119183788|ref|XP_001242885.1| hypothetical protein CIMG_06781... 152 4e-35 gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis] >gnl|BL_O... 152 4e-35 gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HO... 151 5e-35 gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Di... 151 8e-35 gi|85089469|ref|XP_957965.1| hypothetical protein [Neurospora cr... 150 1e-34 gi|3024500|sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A >gnl... 149 3e-34 gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interact... 148 4e-34 gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] 148 5e-34 gi|15236081|ref|NP_195699.1| AtRABH1c (Arabidopsis Rab GTPase ho... 148 7e-34 gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ust... 148 7e-34 gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (jap... 147 1e-33 gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japo... 147 1e-33 gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum] >g... 146 2e-33 gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097... 146 3e-33 gi|154285758|ref|XP_001543674.1| conserved hypothetical protein ... 146 3e-33 gi|147834571|emb|CAN69655.1| hypothetical protein [Vitis vinifer... 146 3e-33 gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica] 146 3e-33 gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346... 146 3e-33 gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Pha... 145 4e-33 gi|78057535|gb|ABB17267.1| secretion related GTPase C [Aspergill... 145 4e-33 gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 ... 145 4e-33 gi|145251179|ref|XP_001397103.1| hypothetical protein An15g05740... 145 5e-33 gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putativ... 145 6e-33 gi|154303178|ref|XP_001551997.1| hypothetical protein BC1G_09609... 145 6e-33 gi|71002422|ref|XP_755892.1| RAS small monomeric GTPase Rab6, pu... 145 7e-33 gi|15230422|ref|NP_187823.1| AtRABA4d (Arabidopsis Rab GTPase ho... 145 7e-33 gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa (jap... 144 7e-33 gi|15222396|ref|NP_172221.1| AtRABA2b (Arabidopsis Rab GTPase ho... 144 7e-33 gi|83770344|dbj|BAE60477.1| unnamed protein product [Aspergillus... 144 7e-33 gi|108706608|gb|ABF94403.1| Ras-related protein Rab-6A, putative... 144 7e-33 gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max] 144 8e-33 gi|3024528|sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV >gnl... 144 1e-32 gi|85082713|ref|XP_956972.1| hypothetical protein ( (NM_017382) ... 144 1e-32 gi|1381676|gb|AAB97114.1| small GTP-binding protein [Glycine max] 144 1e-32 gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis] 144 1e-32 gi|17507543|ref|NP_490675.1| RAB family member (rab-11.1) [Caeno... 143 1e-32 gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum] >g... 143 1e-32 gi|118085220|ref|XP_425653.2| PREDICTED: similar to RAB38 [Gallu... 143 1e-32 gi|71651576|ref|XP_814463.1| small GTP-binding protein RAB6 [Try... 143 1e-32 gi|157344192|emb|CAO69125.1| unnamed protein product [Vitis vini... 143 1e-32 gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Asp... 143 1e-32 gi|623584|gb|AAA74116.1| putative 143 2e-32 gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa (jap... 143 2e-32 gi|147782540|emb|CAN75036.1| hypothetical protein [Vitis vinifer... 143 2e-32 gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum] >g... 143 2e-32 gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlam... 143 2e-32 gi|147802502|emb|CAN73117.1| hypothetical protein [Vitis vinifera] 143 2e-32 gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p... 143 2e-32 gi|15233873|ref|NP_193578.1| AtRABA1e (Arabidopsis Rab GTPase ho... 143 2e-32 gi|145529147|ref|XP_001450362.1| hypothetical protein GSPATT0001... 142 3e-32 gi|41056251|ref|NP_956417.1| hypothetical protein LOC386994 [Dan... 142 3e-32 gi|3024501|sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C >gnl... 142 3e-32 gi|115472201|ref|NP_001059699.1| Os07g0496000 [Oryza sativa (jap... 142 3e-32 gi|15227173|ref|NP_179816.1| AtRABH1d (Arabidopsis Rab GTPase ho... 142 3e-32 gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase ho... 142 3e-32 gi|623586|gb|AAA74117.1| putative 142 3e-32 gi|70990240|ref|XP_749969.1| Ras GTPase Rab11, putative [Aspergi... 142 3e-32 gi|108706607|gb|ABF94402.1| Ras-related protein Rab-6A, putative... 142 3e-32 gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis] 142 4e-32 gi|145357850|ref|NP_196588.3| AtRABH1e (Arabidopsis Rab GTPase h... 142 4e-32 gi|72384491|gb|AAZ67607.1| 80A08_22 [Brassica rapa subsp. pekine... 142 4e-32 gi|19114161|ref|NP_593249.1| GTPase Ryh1 [Schizosaccharomyces po... 142 4e-32 gi|3024504|sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B >gnl... 142 4e-32 gi|6984166|gb|AAF34783.1|AF228419_1 RAB6 protein [Toxoplasma gon... 142 4e-32 gi|156542630|ref|XP_001604718.1| PREDICTED: similar to rab6 [Nas... 142 4e-32 gi|15224916|ref|NP_181989.1| RAB6; GTP binding [Arabidopsis thal... 142 4e-32 gi|134118235|ref|XP_772218.1| hypothetical protein CNBM0510 [Cry... 142 4e-32 gi|157358689|emb|CAO66374.1| unnamed protein product [Vitis vini... 141 5e-32 gi|145229443|ref|XP_001389030.1| hypothetical protein An01g06060... 141 5e-32 gi|15237828|ref|NP_200723.1| AtRABA2d (Arabidopsis Rab GTPase ho... 141 5e-32 gi|145607295|ref|XP_361669.2| RAS small monomeric GTPase Rab6 [M... 141 5e-32 gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japo... 141 5e-32 gi|116812567|ref|NP_065120.2| RAB25 [Homo sapiens] >gnl|BL_ORD_I... 141 6e-32 gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [... 141 6e-32 gi|147834751|emb|CAN75016.1| hypothetical protein [Vitis vinifer... 141 7e-32 gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 1089... 141 7e-32 gi|149751384|ref|XP_001499799.1| PREDICTED: similar to RAB25, me... 141 7e-32 gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neo... 141 8e-32 gi|115478587|ref|NP_001062887.1| Os09g0327100 [Oryza sativa (jap... 141 8e-32 gi|160704321|gb|EAT78701.2| hypothetical protein SNOG_14076 [Pha... 141 9e-32 gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis] 141 1e-31 gi|150866330|ref|XP_001385886.2| predicted protein [Pichia stipi... 140 1e-31 gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypi... 140 1e-31 gi|15234020|ref|NP_193615.1| AtRABA1d/AtRab11B/AthSGBP (Arabidop... 140 1e-31 gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding pr... 140 1e-31 gi|157745909|ref|XP_001668051.1| Hypothetical protein CBG03904 [... 140 1e-31 gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein... 140 1e-31 gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanos... 140 1e-31 gi|157344707|emb|CAO70462.1| unnamed protein product [Vitis vini... 140 1e-31 gi|158297778|ref|XP_001238010.2| AGAP011363-PA [Anopheles gambia... 140 2e-31 gi|15225121|ref|NP_180726.1| AtRABA5d (Arabidopsis Rab GTPase ho... 140 2e-31 gi|91094319|ref|XP_972453.1| PREDICTED: similar to CG6601-PA [Tr... 140 2e-31 gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana] 140 2e-31 gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa] 140 2e-31 gi|157112176|ref|XP_001657425.1| rab6 [Aedes aegypti] >gnl|BL_OR... 140 2e-31 gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa (jap... 140 2e-31 gi|48766845|gb|AAT46563.1| Rab [Marsupenaeus japonicus] 140 2e-31 gi|42561732|ref|NP_563750.2| ARA/Ara-1/AtRABA5e/AtRab11D (Arabid... 140 2e-31 gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histol... 140 2e-31 gi|17570073|ref|NP_510790.1| RAB family member (rab-6.2) [Caenor... 139 2e-31 gi|15236099|ref|NP_195709.1| ATGB3 (GTP-BINDING PROTEIN 3); GTP ... 139 2e-31 gi|46135805|ref|XP_389594.1| hypothetical protein FG09418.1 [Gib... 139 2e-31 gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis ... 139 2e-31 gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein ... 139 3e-31 gi|157338312|emb|CAO39356.1| unnamed protein product [Vitis vini... 139 3e-31 gi|157112172|ref|XP_001657423.1| rab6 [Aedes aegypti] >gnl|BL_OR... 139 3e-31 gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum] >g... 139 3e-31 gi|125836147|ref|XP_001339841.1| PREDICTED: hypothetical protein... 139 3e-31 gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza ... 139 3e-31 gi|145610591|ref|XP_368165.2| hypothetical protein MGG_01079 [Ma... 139 3e-31 gi|145349021|ref|XP_001418939.1| predicted protein [Ostreococcus... 139 3e-31 gi|126644156|ref|XP_001388214.1| RAB6 protein, putative [Cryptos... 139 3e-31 gi|145510136|ref|XP_001441001.1| hypothetical protein GSPATT0000... 139 3e-31 gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa (jap... 139 3e-31 gi|115768277|ref|XP_782114.2| PREDICTED: hypothetical protein [S... 139 3e-31 gi|46111195|ref|XP_382655.1| conserved hypothetical protein [Gib... 139 3e-31 gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus] 139 3e-31 gi|109108201|ref|XP_001104269.1| PREDICTED: similar to RAB38 [Ma... 139 3e-31 gi|9789019|gb|AAF98238.1| unknown [Homo sapiens] 139 3e-31 gi|157767730|ref|XP_001667345.1| Hypothetical protein CBG15944 [... 139 3e-31 gi|47087033|ref|NP_998530.1| hypothetical protein LOC406674 [Dan... 139 4e-31 gi|17137220|ref|NP_477172.1| Rab-protein 6 CG6601-PA [Drosophila... 138 4e-31 gi|147784781|emb|CAN66526.1| hypothetical protein [Vitis vinifer... 138 4e-31 gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypi... 138 5e-31 gi|114052691|ref|NP_001040270.1| ras small monomeric GTPase Rab6... 138 5e-31 gi|11641237|ref|NP_071732.1| RAB38 [Homo sapiens] >gnl|BL_ORD_ID... 138 5e-31 gi|33150768|gb|AAP97262.1|AF136172_1 rab-related GTP-binding pro... 138 5e-31 gi|73987970|ref|XP_850212.1| PREDICTED: similar to Rab38, member... 138 5e-31 gi|157069725|gb|EAA28729.2| hypothetical protein NCU09982 [Neuro... 138 5e-31 gi|119918805|ref|XP_001252195.1| PREDICTED: similar to RAB38 iso... 138 5e-31 gi|125558411|gb|EAZ03947.1| hypothetical protein OsI_025179 [Ory... 138 5e-31 gi|146075496|ref|XP_001462715.1| small GTP binding protein rab6-... 138 5e-31 gi|147777473|emb|CAN62732.1| hypothetical protein [Vitis vinifer... 138 6e-31 gi|68486004|ref|XP_713074.1| putative rab family GTP-binding pro... 138 6e-31 gi|145549438|ref|XP_001460398.1| hypothetical protein GSPATT0000... 138 6e-31 gi|125836149|ref|XP_001339908.1| PREDICTED: hypothetical protein... 138 6e-31 gi|159102818|gb|EDP41716.1| hypothetical protein MGL_3924 [Malas... 138 6e-31 gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha gr... 138 7e-31 gi|149719243|ref|XP_001489548.1| PREDICTED: similar to Rab-relat... 138 7e-31 gi|17553774|ref|NP_498993.1| RAB family member (rab-6.1) [Caenor... 138 7e-31 gi|1172845|sp|P46629|RAB25_RABIT Ras-related protein Rab-25 >gnl... 138 7e-31 gi|15242483|ref|NP_199387.1| AtRABA1c (Arabidopsis Rab GTPase ho... 138 7e-31 gi|126307642|ref|XP_001367187.1| PREDICTED: similar to RAB25, me... 138 7e-31 gi|157775947|ref|XP_001666039.1| Hypothetical protein CBG06854 [... 138 7e-31 gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa (jap... 138 8e-31 gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic prot... 138 8e-31 gi|148227273|ref|NP_001090835.1| RAB6B, member RAS oncogene fami... 138 8e-31 gi|66911325|gb|AAH97051.1| Zgc:63637 protein [Danio rerio] 137 9e-31 gi|147788245|emb|CAN75965.1| hypothetical protein [Vitis vinifera] 137 9e-31 gi|48096836|ref|XP_392533.1| PREDICTED: similar to Rab-protein 6... 137 1e-30 gi|157354705|emb|CAO48023.1| unnamed protein product [Vitis vini... 137 1e-30 gi|157331739|emb|CAO66868.1| unnamed protein product [Vitis vini... 137 1e-30 gi|115690607|ref|XP_001202918.1| PREDICTED: similar to Dynein, c... 137 1e-30 gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, i... 137 1e-30 gi|159106574|gb|EDP45457.1| hypothetical protein MGL_0446 [Malas... 137 1e-30 gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza... 137 1e-30 gi|47228262|emb|CAG07657.1| unnamed protein product [Tetraodon n... 137 1e-30 gi|147789804|emb|CAN62934.1| hypothetical protein [Vitis vinifer... 137 1e-30 gi|47222578|emb|CAG02943.1| unnamed protein product [Tetraodon n... 137 1e-30 gi|13195674|ref|NP_077249.1| RAB6A, member RAS oncogene family [... 136 1e-30 gi|62898834|dbj|BAD97271.1| RAB6A, member RAS oncogene family is... 136 1e-30 gi|119907597|ref|XP_001252030.1| PREDICTED: similar to Rab6 prot... 136 2e-30 gi|109459131|ref|XP_001062702.1| PREDICTED: similar to RAB6A, me... 136 2e-30 gi|126327867|ref|XP_001363218.1| PREDICTED: similar to Rab6 prot... 136 2e-30 gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aes... 136 2e-30 gi|109107885|ref|XP_001115437.1| PREDICTED: similar to RAB6A, me... 136 2e-30 gi|126327865|ref|XP_001363135.1| PREDICTED: similar to Rab6 prot... 136 2e-30 gi|126310667|ref|XP_001370750.1| PREDICTED: similar to RAB32 [Mo... 136 2e-30 gi|38679888|ref|NP_942599.1| RAB6A, member RAS oncogene family i... 136 2e-30 gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum] 136 2e-30 gi|66828353|ref|XP_647531.1| Rab GTPase [Dictyostelium discoideu... 136 2e-30 gi|73535740|pdb|1YZQ|A Chain A, Gppnhp-Bound Rab6 Gtpase 136 2e-30 gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus N... 136 2e-30 gi|289370|gb|AAA68983.1| small GTP-binding protein 136 2e-30 gi|19923231|ref|NP_002860.2| RAB6A, member RAS oncogene family i... 136 2e-30 gi|156717362|ref|NP_001096221.1| hypothetical protein LOC1001247... 136 2e-30 gi|125828213|ref|XP_001331974.1| PREDICTED: similar to RAB6, mem... 136 2e-30 gi|47225306|emb|CAG09806.1| unnamed protein product [Tetraodon n... 136 2e-30 gi|83751822|gb|ABC42924.1| GTP-binding protein [Anas platyrhynchos] 136 2e-30 gi|73987984|ref|XP_850271.1| PREDICTED: similar to RAB6A, member... 136 2e-30 gi|15232477|ref|NP_188124.1| AtRABA1g (Arabidopsis Rab GTPase ho... 136 2e-30 gi|113206062|ref|NP_001038105.1| RAB6A, member RAS oncogene fami... 136 2e-30 gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab2... 136 2e-30 gi|45185690|ref|NP_983406.1| ACR003Cp [Ashbya gossypii ATCC 1089... 136 3e-30 gi|45361477|ref|NP_989315.1| RAB6A, member RAS oncogene family [... 136 3e-30 gi|56757031|gb|AAW26687.1| SJCHGC02776 protein [Schistosoma japo... 136 3e-30 gi|72009202|ref|XP_782400.1| PREDICTED: similar to Rab32 protein... 136 3e-30 gi|147903483|ref|NP_001080506.1| RAB6A, member RAS oncogene fami... 136 3e-30 gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspe... 136 3e-30 gi|148233560|ref|NP_001086132.1| MGC83971 protein [Xenopus laevi... 135 3e-30 gi|114559803|ref|XP_522433.2| PREDICTED: similar to RAB13 protei... 135 4e-30 gi|157343673|emb|CAO68179.1| unnamed protein product [Vitis vini... 135 4e-30 gi|67472102|ref|XP_651915.1| Rab family GTPase [Entamoeba histol... 135 4e-30 gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa] 135 4e-30 gi|134106957|ref|XP_777791.1| hypothetical protein CNBA4890 [Cry... 135 4e-30 gi|6323642|ref|NP_013713.1| GTPase; GTP-binding protein of the r... 135 4e-30 gi|50292103|ref|XP_448484.1| unnamed protein product [Candida gl... 135 4e-30 gi|6320869|ref|NP_010948.1| GTPase of the Ypt/Rab family, very s... 135 5e-30 gi|30424655|ref|NP_776142.1| RAB6B, member RAS oncogene family [... 135 5e-30 gi|156844455|ref|XP_001645290.1| hypothetical protein Kpol_1037p... 135 5e-30 gi|145534648|ref|XP_001453068.1| hypothetical protein GSPATT0001... 135 5e-30 gi|77681452|ref|NP_001029351.1| RAB6B, member RAS oncogene famil... 135 6e-30 gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (p... 135 6e-30 gi|1370164|emb|CAA98159.1| RAB1B [Lotus japonicus] 135 7e-30 gi|45191035|ref|NP_985289.1| AER434Cp [Ashbya gossypii ATCC 1089... 135 7e-30 gi|31980838|ref|NP_058595.2| RAB25, member RAS oncogene family [... 134 7e-30 gi|2618484|dbj|BAA23371.1| dynein light intermediate chain 53/55... 134 9e-30 gi|6323291|ref|NP_013363.1| GTPase, Ras-like GTP binding protein... 134 1e-29 gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus] 134 1e-29 gi|157072984|gb|EAA32658.2| GTP-binding protein ryh1 [Neurospora... 134 1e-29 gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RA... 134 1e-29 gi|152012618|gb|AAI50366.1| Unknown (protein for IMAGE:7435314) ... 134 1e-29 gi|51480434|gb|AAH80215.1| Rab6b protein [Danio rerio] 134 1e-29 gi|61806504|ref|NP_001013485.1| hypothetical protein LOC541339 [... 134 1e-29 gi|3024529|sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E >gnl... 134 1e-29 gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-li... 134 1e-29 gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory p... 134 1e-29 gi|2618480|dbj|BAA23369.1| dynein light intermediate chain 53/55... 133 1e-29 gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella... 133 1e-29 Sequences not found previously or not previously below threshold: gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, m... 151 6e-35 gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlam... 150 1e-34 gi|114675154|ref|XP_001147785.1| PREDICTED: similar to GTP-bindi... 149 2e-34 gi|149426497|ref|XP_001518037.1| PREDICTED: similar to rab11, pa... 149 3e-34 gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus] 148 4e-34 gi|73987203|ref|XP_854399.1| PREDICTED: similar to RAB11B, membe... 148 7e-34 gi|149692307|ref|XP_001496560.1| PREDICTED: similar to rab11 [Eq... 148 7e-34 gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos] 147 1e-33 gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase 146 1e-33 gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G P... 146 2e-33 gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncog... 146 3e-33 gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon n... 146 3e-33 gi|4758984|ref|NP_004654.1| Ras-related protein Rab-11A [Homo sa... 146 3e-33 gi|57524801|ref|NP_001005827.1| Ras-related protein Rab-11A [Gal... 145 4e-33 gi|84000297|ref|NP_001033251.1| hypothetical protein LOC534708 [... 145 4e-33 gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cry... 145 4e-33 gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malas... 145 4e-33 gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] 145 6e-33 gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japo... 145 7e-33 gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] 144 7e-33 gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Dan... 144 7e-33 gi|42543204|pdb|1OIW|A Chain A, X-Ray Structure Of The Small G P... 144 8e-33 gi|116498990|gb|EAU81885.1| hypothetical protein CC1G_06096 [Cop... 144 8e-33 gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens] 144 9e-33 gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus] 144 1e-32 gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon n... 144 1e-32 gi|6679583|ref|NP_033023.1| RAB11B, member RAS oncogene family [... 144 1e-32 gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens] 144 1e-32 gi|50540176|ref|NP_001002555.1| hypothetical protein LOC436828 [... 143 1e-32 gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [sy... 143 1e-32 gi|14249144|ref|NP_116006.1| RAB11B, member RAS oncogene family ... 143 1e-32 gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana] 143 2e-32 gi|91076508|ref|XP_973251.1| PREDICTED: similar to CG5771-PB, is... 143 2e-32 gi|55925277|ref|NP_001007360.1| RAB11a, member RAS oncogene fami... 143 2e-32 gi|131849|sp|P22129|RB11B_DISOM Ras-related protein Rab-11B (ORA... 143 2e-32 gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus] 143 2e-32 gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries] 143 2e-32 gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene fami... 143 2e-32 gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene fami... 143 2e-32 gi|82596931|ref|XP_726467.1| hypothetical protein PY00721 [Plasm... 143 2e-32 gi|60302752|ref|NP_001012569.1| RAB11B, member RAS oncogene fami... 143 2e-32 gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound ... 143 2e-32 gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekine... 143 2e-32 gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene fam... 142 3e-32 gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus... 142 3e-32 gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus] 142 3e-32 gi|15238392|ref|NP_201330.1| AtRABA4a (Arabidopsis Rab GTPase ho... 142 4e-32 gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [H... 142 4e-32 gi|94733945|emb|CAK04342.1| novel protein (zgc:55760) [Danio rerio] 142 4e-32 gi|147844837|emb|CAN83336.1| hypothetical protein [Vitis vinifer... 142 4e-32 gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human R... 142 4e-32 gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella... 142 4e-32 gi|4758986|ref|NP_004209.1| RAB11B, member RAS oncogene family [... 142 4e-32 gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens] 141 5e-32 gi|148236881|ref|NP_001088852.1| hypothetical protein LOC496163 ... 141 5e-32 gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus] 141 5e-32 gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella] 141 6e-32 gi|52345666|ref|NP_001004880.1| MGC88884 protein [Xenopus tropic... 141 6e-32 gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti] >gnl|BL_O... 141 6e-32 gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus] >gnl|BL... 141 7e-32 gi|15231462|ref|NP_187397.1| AtRABA5b (Arabidopsis Rab GTPase ho... 141 7e-32 gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus] 141 8e-32 gi|15219955|ref|NP_173136.1| RAB11 (ARABIDOPSIS RAB GTPASE HOMOL... 141 8e-32 gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab1... 141 8e-32 gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ust... 141 1e-31 gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein... 141 1e-31 gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In C... 140 1e-31 gi|499068|emb|CAA54506.1| GTPase [Glycine max] 140 1e-31 gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa (jap... 140 2e-31 gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa] 140 2e-31 gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca coagulata] 140 2e-31 gi|15232652|ref|NP_190267.1| AtRABA2c/AtRab11A (Arabidopsis Rab ... 140 2e-31 gi|66513627|ref|XP_623997.1| PREDICTED: similar to Rab-protein 1... 139 2e-31 gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces po... 139 2e-31 gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon n... 139 3e-31 gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gib... 139 3e-31 gi|156551916|ref|XP_001607057.1| PREDICTED: similar to putative ... 139 3e-31 gi|50292391|ref|XP_448628.1| unnamed protein product [Candida gl... 139 3e-31 gi|109940137|sp|P25766|RGP1_ORYSJ Ras-related protein RGP1 (GTP-... 139 4e-31 gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa (jap... 138 4e-31 gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [B... 138 5e-31 gi|158292354|ref|XP_313857.2| AGAP004559-PD [Anopheles gambiae s... 138 5e-31 gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, put... 138 5e-31 gi|125552993|gb|EAY98702.1| hypothetical protein OsI_019935 [Ory... 138 5e-31 gi|147899039|ref|NP_001089868.1| hypothetical protein LOC734934 ... 138 5e-31 gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa (jap... 138 5e-31 gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula] 138 5e-31 gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis] 138 6e-31 gi|125808502|ref|XP_692506.2| PREDICTED: similar to Rab11b prote... 138 6e-31 gi|125951003|ref|XP_001345672.1| PREDICTED: hypothetical protein... 138 6e-31 gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270... 138 7e-31 gi|17137216|ref|NP_477170.1| Rab-protein 11 CG5771-PB, isoform B... 138 7e-31 gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon n... 138 7e-31 gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa (jap... 138 7e-31 gi|15218719|ref|NP_174177.1| AtRABA1i (Arabidopsis Rab GTPase ho... 138 8e-31 gi|1575675|gb|AAC47440.1| rab6 [Plasmodium falciparum] 137 8e-31 gi|125604071|gb|EAZ43396.1| hypothetical protein OsJ_026879 [Ory... 137 1e-30 gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis] 137 1e-30 gi|62988286|ref|NP_001017936.1| RAB25, member RAS oncogene famil... 137 1e-30 gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana ... 137 1e-30 gi|125562255|gb|EAZ07703.1| hypothetical protein OsI_028935 [Ory... 137 1e-30 gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis] 137 1e-30 gi|125605011|gb|EAZ44047.1| hypothetical protein OsJ_027530 [Ory... 136 1e-30 gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum] >g... 136 1e-30 gi|68485957|ref|XP_713097.1| putative rab family GTP-binding pro... 136 2e-30 gi|6759651|gb|AAF27978.1|AF093826_1 GTP binding protein; Rab6 [P... 136 2e-30 gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneif... 136 2e-30 gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene fami... 136 2e-30 gi|147902449|ref|NP_001086223.1| MGC84182 protein [Xenopus laevi... 136 2e-30 gi|5902803|sp|P28188|ARA5_ARATH Ras-related protein ARA-5 >gnl|B... 136 2e-30 gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene famil... 136 2e-30 gi|466172|sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 >gnl|B... 136 2e-30 gi|157328625|emb|CAO22323.1| unnamed protein product [Vitis vini... 136 2e-30 gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa] 136 3e-30 gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus] 136 3e-30 gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max] 136 3e-30 gi|114085|sp|P19892|ARA1_ARATH Ras-related protein ARA-1 >gnl|BL... 136 3e-30 gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis] >gnl|BL_O... 135 3e-30 gi|3024505|sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D >gnl... 135 3e-30 gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [C... 135 3e-30 gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans] 135 3e-30 gi|115447653|ref|NP_001047606.1| Os02g0653800 [Oryza sativa (jap... 135 4e-30 gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster] 135 4e-30 gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thali... 135 4e-30 gi|58261886|ref|XP_568353.1| hypothetical protein CNM00590 [Cryp... 135 4e-30 gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus] 135 4e-30 gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum] >g... 135 4e-30 gi|125559285|gb|EAZ04821.1| hypothetical protein OsI_026053 [Ory... 135 5e-30 gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa (jap... 135 5e-30 gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic prot... 135 5e-30 gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideu... 135 5e-30 gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta v... 135 5e-30 gi|15217622|ref|NP_171715.1| ATRAB1B (Arabidopsis thaliana respo... 135 5e-30 gi|217841|dbj|BAA00832.1| small GTP-binding protein [Arabidopsis... 135 5e-30 gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideu... 135 5e-30 gi|3024506|sp|Q40523|RB11A_TOBAC Ras-related protein Rab11A >gnl... 135 6e-30 gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lema... 135 6e-30 gi|149239262|ref|XP_001525507.1| GTP-binding protein ryh1 [Lodde... 135 6e-30 gi|72255617|gb|AAZ66935.1| 117M18_16 [Brassica rapa] >gnl|BL_ORD... 135 6e-30 gi|3024503|sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C >gnl... 135 6e-30 gi|125546399|gb|EAY92538.1| hypothetical protein OsI_013771 [Ory... 135 7e-30 gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa (jap... 135 7e-30 gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza ... 134 7e-30 gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [A... 134 8e-30 gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabi... 134 8e-30 gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa (jap... 134 9e-30 gi|267527|sp|Q01111|YPT3_NICPL Ras-related protein YPT3 >gnl|BL_... 134 1e-29 gi|157327287|emb|CAO15080.1| unnamed protein product [Vitis vini... 134 1e-29 gi|15221477|ref|NP_172128.1| ARA2 (Arabidopsis Rab GTPase homolo... 134 1e-29 gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa] 133 1e-29 gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis] 133 1e-29 >gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|20988526|gb|AAH30450.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|24659541|gb|AAH39070.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 351 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 212/359 (59%), Positives = 266/359 (74%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R S E + E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRRSHGSEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE+AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDESAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE--SRSGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT S +QR+ V+ KD+PDRE Sbjct: 113 LVLDLSKPNDLWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V++K+FP +ST K ++DP +DPQ++E +D +R QKDQEL+ YKR +K+WK + LD Sbjct: 292 VYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWKQIELD 350 >gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light intermediate chain isoform 1 [Pan troglodytes] Length = 351 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 213/359 (59%), Positives = 266/359 (74%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT+D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K++KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 292 VYEKLFPPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain isoform 1 variant [Homo sapiens] Length = 351 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 211/359 (58%), Positives = 263/359 (73%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD E Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKLR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 292 VYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 350 >gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 2 [Canis familiaris] Length = 348 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 215/359 (59%), Positives = 266/359 (74%), Gaps = 14/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R S D E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGSEGDGLE--------IGEKSVFFIGSKNGGKTTIILRCL 49 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHN PKDIAH WELGGG SL DL+ IPIT+DN+ S+V Sbjct: 50 DRDEPPKPTLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTFSIV 109 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+K+ L KT +Q++ + KD+PDRE Sbjct: 110 LVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRE 169 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 L+ PF +PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 170 LVDPFLIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKVR 228 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DSLSQIG P + DIG LHA +P DLWKK Sbjct: 229 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKK 288 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+E+VFP +ST K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 289 VYERVFPPKSTNTLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWKQIELD 347 >gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain isoform 1 [Homo sapiens] gi|19908231|gb|AAL99216.1| dynein 2 light intermediate chain [Homo sapiens] gi|119620696|gb|EAX00291.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_c [Homo sapiens] Length = 351 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 211/359 (58%), Positives = 262/359 (72%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD E Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 292 VYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 350 >gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] gi|81673547|gb|AAI09911.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] Length = 351 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 214/359 (59%), Positives = 266/359 (74%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R S +E + E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGSSENEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRR +GHN PKDIAH WELGGG SL DL+ IPIT+D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + + ++KV L K +Q++ + KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 L+ PFP+PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LLDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG + KSI D +KPL I AG DSLSQIGPP + DIG LHA++P DLWKK Sbjct: 232 GVINQLAFGINKSKSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDLWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K++KDP KDPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 292 VYEKLFPPKSINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein [Equus caballus] Length = 351 Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 212/359 (59%), Positives = 267/359 (74%), Gaps = 11/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP SDTLW+IA AEV R S E + E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SDTLWEIAKAEVEKRGSNGSESDGVE-----IGEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GR+A+GHN PKDIAH WELGGG SL DL+ IPIT+D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRKAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V KV L K +Q++ + KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVNKVIMKLGKKNSKASSEMRQKIWSNMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 +I PFP+PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 IIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DSLSQIG P + DIG LHA++P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+E++FP ++T K++KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 292 VYERLFPPKNTNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Danio rerio] gi|32766386|gb|AAH55198.1| Zgc:63673 [Danio rerio] Length = 358 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 358/358 (100%), Positives = 358/358 (100%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL Sbjct: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV Sbjct: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI Sbjct: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF Sbjct: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF Sbjct: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 Query: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP Sbjct: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 >gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|62822153|gb|AAY14702.1| unknown [Homo sapiens] gi|119620694|gb|EAX00289.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 352 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 210/360 (58%), Positives = 261/360 (72%), Gaps = 12/360 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDY-PDR 177 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+ D Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPQDH 172 Query: 178 ELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKS 237 ELI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K Sbjct: 173 ELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKI 231 Query: 238 RSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 R INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWK Sbjct: 232 RGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWK 291 Query: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 KV+EK+FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 292 KVYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 351 >gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] Length = 350 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 210/359 (58%), Positives = 261/359 (72%), Gaps = 12/359 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ +D+PD E Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWN-YAEDHPDHE 171 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 172 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 230 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 231 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 290 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 291 VYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 349 >gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 387 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 212/354 (59%), Positives = 265/354 (74%), Gaps = 8/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 SDTLW+IA AEV RE + + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 39 SDTLWEIAKAEVEKREISENGGDGAE-----VCEKSVFFIGSKNGGKTTIILRCLDRDEP 93 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT +++ S+VLVLDL Sbjct: 94 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITNESLRTFSLVLVLDL 153 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPF 183 SKPN LW TMESLL + V+K+ L KT +Q++ + KD+PDRELI PF Sbjct: 154 SKPNDLWPTMESLLQVTKAHVDKLIMKLGKTSTKAASEMRQKMWSNMQKDHPDRELIDPF 213 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P+PL+I+GSK+DIFQDFDSEKRK+ICKTLRF++H+YGASL+F S KSE + K R INQ Sbjct: 214 PIPLVIIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMFAS-KSEALLLKIRGVINQ 272 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSIS D +KPL IPAG DSLSQIG P +E +IG LHA+ P +LWKKV+EKV Sbjct: 273 LAFGIDKSKSISVDQNKPLFIPAGLDSLSQIGSPPLSENEIGKLHAQTPMELWKKVYEKV 332 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +S KE +DP +DPQ++E +D +RAQKDQEL+QYK+ +KSWK + D Sbjct: 333 FPPKSANTSKETRDPARDPQYAESEVDEMRAQKDQELEQYKKNTSKSWKQIEFD 386 >gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 light intermediate chain [Gallus gallus] Length = 637 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 204/360 (56%), Positives = 263/360 (73%), Gaps = 9/360 (2%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPK + DTLWDIA EV RE+ D+ + E +++V FMGSK GGKTTI+LR L Sbjct: 284 MPK-AGDTLWDIARDEVEKRENNGDDGKRVE-----VCEKSVLFMGSKNGGKTTIILRCL 337 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 ER+E KPTL LEYTFGRRAR HN PKDIAH WE+GGG SL +L++IPIT +N+ +VV Sbjct: 338 EREEVPKPTLVLEYTFGRRARRHNAPKDIAHFWEIGGGTSLLELIRIPITVNNIRSFAVV 397 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES--RSGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + RN V K+ A L+KT KQ++ L +D+PD + Sbjct: 398 LVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKTDPEVAAEIKQKMQNNLQRDHPDYD 457 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 L+ PFP+PL+I+GSK+DIF +FDSE RK+I +TLRF++H+YGASL+FTS KSE + K+R Sbjct: 458 LVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRFVSHYYGASLVFTS-KSEALLLKAR 516 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 + IN LAFG +R KS+S D SKPL IPAG DSLSQIGPP ++ +IG + A P +LWKK Sbjct: 517 ALINHLAFGYDRSKSVSVDHSKPLFIPAGLDSLSQIGPPPTSDSNIGKMRANTPLELWKK 576 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 VFEK FP S + ++ KDP + Q++E +D +RAQK+QE +QYKR +KSWK + DP Sbjct: 577 VFEKTFPPRSFSDLQDSKDPAQVSQYAEYEVDVMRAQKNQEFEQYKRNASKSWKEMDFDP 636 >gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 [Macaca mulatta] Length = 365 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 199/359 (55%), Positives = 254/359 (70%), Gaps = 8/359 (2%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 +P+ +TLW+IA AEV R E + E +++VFF+GSK GGKTTI+LR L Sbjct: 12 VPQKIIETLWEIAKAEVEKRGINGSEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCL 66 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RD K L L ++F G +TPKDIAH WELGGG SL DL+ +PIT+D + S+V Sbjct: 67 DRDRPPKMVLFLFFSFSFCHPGWSTPKDIAHFWELGGGTSLLDLISVPITSDTLRTFSLV 126 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+K+ L KT +Q++ + KD+PDRE Sbjct: 127 LVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNPKAASEMRQKIWNNMQKDHPDRE 186 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+DIFQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 187 LIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 245 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS SQIG P E DIG LHA +P +LWKK Sbjct: 246 GVINQLAFGIDKSKSICVDQNKPLLITAGLDSFSQIGSPPVPENDIGKLHAHSPMELWKK 305 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 306 VYEKLFPPKSINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 364 >gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermediate chain isoform 2 [Pan troglodytes] Length = 334 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 202/342 (59%), Positives = 252/342 (73%), Gaps = 11/342 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT+D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQEL 340 V+EK+FP +S K++KDP +DPQ++E +D +R QKDQ L Sbjct: 292 VYEKLFPPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQVL 333 >gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chain isoform 3 [Homo sapiens] Length = 334 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 199/339 (58%), Positives = 247/339 (72%), Gaps = 11/339 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD E Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKD 337 V+EK+FP +S K++KDP +DPQ++E +D +R QKD Sbjct: 292 VYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKD 330 >gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] Length = 341 Score = 363 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 196/335 (58%), Positives = 248/335 (74%), Gaps = 11/335 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV+ R S E + E ++++FF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVQKRRSHGSEGDGAE-----IGEKSLFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE+AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDESAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE--SRSGKQRVPRVLHKDYPDRE 178 LVLDLSKPN W TME+LL + ++ V+KV L KT S +QR+ V+ KD+PDRE Sbjct: 113 LVLDLSKPNDHWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIR 333 V++K+FP +ST K ++DP +DPQ++E +D +R Sbjct: 292 VYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMR 326 >gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] Length = 318 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 187/319 (58%), Positives = 234/319 (73%), Gaps = 8/319 (2%) Query: 21 ESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRA 80 E + E ++++VFF+GSK GGKTTI+LR L+RDE KPTLALEYT+GRRA Sbjct: 2 GINGSEGDGAE-----FAEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRA 56 Query: 81 RGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLG 140 +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDLSKPN LW TME+LL Sbjct: 57 KGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQ 116 Query: 141 SARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQ 198 + ++ V+KV L KT +Q++ + KD+PD ELI PFPVPL+I+GSK+D+FQ Sbjct: 117 ATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQ 176 Query: 199 DFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 DF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R INQLAFG ++ KSI D Sbjct: 177 DFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKLRGVINQLAFGIDKSKSICVDQ 235 Query: 259 SKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDP 318 +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK+FP +S K++KDP Sbjct: 236 NKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDP 295 Query: 319 VKDPQFSEPLIDSIRAQKD 337 +DPQ++E +D +R QKD Sbjct: 296 ARDPQYAENEVDEMRIQKD 314 >gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115941395|ref|XP_001177851.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 363 Score = 338 bits (868), Expect = 3e-91, Method: Composition-based stats. Identities = 161/350 (46%), Positives = 243/350 (69%), Gaps = 7/350 (2%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 ++WDIA E + + +E+ E S+ + F+GSK GKT+I+LRFLE++E Sbjct: 7 KSIWDIAILEAEQKHATESKEQGGEAKG---SENHILFIGSKNAGKTSIILRFLEKEEAP 63 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 KPT+ALEYTFGRRA+GHN KDI H+WELGGG LS L +IP++ D + S+++V+DLS Sbjct: 64 KPTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDLS 123 Query: 127 KPNALWETMESLLGSARNQVEKVCAAL--QKTGESRSGKQRVPRVLHKDYPDRELISPFP 184 +P LW TME+L+ A + VE+V + K+R + + D+PDR+++ PFP Sbjct: 124 QPYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHPDRDMLDPFP 183 Query: 185 VPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQL 244 +PL+IVG+K+D++QDFD EKRKVI KTLRF+AH YGA+L F+S+K++ MS++++ ++ L Sbjct: 184 LPLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTKNLVSHL 243 Query: 245 AFGTE-RPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 AFGT K+IS DP+KP+++P G DSL QIG P + D+G +A+ P DLWK+ F Sbjct: 244 AFGTTLSLKTISIDPNKPISVPFGLDSLEQIGLPPVADDDLGRSNARTPLDLWKQAFTSY 303 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKS 353 FP +ST + ++DP KDPQ++E +D++R QK++EL++Y+++ + K Sbjct: 304 FPQKSTIKA-IVEDPSKDPQYAEAAVDNMREQKNKELERYRKQAERRAKE 352 >gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella vectensis] gi|156226126|gb|EDO46938.1| predicted protein [Nematostella vectensis] Length = 366 Score = 336 bits (863), Expect = 1e-90, Method: Composition-based stats. Identities = 161/357 (45%), Positives = 227/357 (63%), Gaps = 3/357 (0%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 K S T+WD+A E + ++ +E H + +F +GSK GKT+++LRFL+R Sbjct: 4 KRSDKTIWDLAIEERDYLLNEAKKKGTQESSPHG-EEAGIFLIGSKNAGKTSMVLRFLDR 62 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 DE KPT AL+YTFGR+A+GHN KD+ H+WELGGG LS L+ IPI D+V LS+++ Sbjct: 63 DEVPKPTTALDYTFGRKAKGHNIAKDVGHIWELGGGTFLSKLIDIPINVDSVRGLSIIIF 122 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQR--VPRVLHKDYPDRELI 180 LDLS PN LW TME+LL + +V KV L S K R D+PD+ + Sbjct: 123 LDLSLPNELWHTMETLLNQVKKRVHKVMDELAAKNPSAVQKLRNDAWEKFGTDHPDKSFV 182 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 PFP+PL IVG K+DI+QDFD EKRK+I + LRF+AH GA L F S+K+E + +SR Sbjct: 183 EPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGRSRGM 242 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 I L F T K+I D +KP+ + AG DSL+QIG P D+G L ++NP+DLWK + Sbjct: 243 IGHLLFHTSLGKAIGVDHNKPIIVSAGQDSLAQIGAPPVASEDLGRLQSRNPYDLWKAAY 302 Query: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP E +++ + +DP KDPQ+ E +D++R QKD+ELD+Y+R+ + + ++ D Sbjct: 303 ATFFPPEKSKQHSDREDPSKDPQYFEAAVDAMRKQKDEELDRYRRQAERKAREMSRD 359 >gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibenclamide-sensitive voltage-gated potassium channel, partial [Ornithorhynchus anatinus] Length = 449 Score = 333 bits (855), Expect = 9e-90, Method: Composition-based stats. Identities = 185/343 (53%), Positives = 244/343 (71%), Gaps = 16/343 (4%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +TLW+IA AEV +E +E +++VFF+GSK GGKTTI+LR L+RDE A Sbjct: 1 ETLWEIARAEVEKKEKPGGGDEG---------EKSVFFVGSKNGGKTTIILRCLDRDEPA 51 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 +PTLALEYTFGRRARGHNTPKDIAH WELGGG SL DL +IPITAD++ + + LDLS Sbjct: 52 RPTLALEYTFGRRARGHNTPKDIAHFWELGGGTSLLDLARIPITADSLRTFATDIFLDLS 111 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVP 186 +P+ LW T E LL + R VE L + G + R + +D+PDRE I PFP+P Sbjct: 112 RPSELWLTAEHLLRAVRTHVEN----LGQPGTRAAATPRTWSPVPEDHPDREFIDPFPIP 167 Query: 187 LLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 L+I+GSK+D+FQ+ DSEKRKVIC+TLRFLAH +GA+L+FT KSE + K+RS I+ LAF Sbjct: 168 LVIIGSKYDVFQNLDSEKRKVICRTLRFLAHHHGATLMFTG-KSEALLLKTRSVISHLAF 226 Query: 247 --GTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVF 304 G +R K+++ D +KPL IPAG DS SQIGPP + DIG L + P +LWK+V+ K F Sbjct: 227 GVGVDRSKALTLDQNKPLFIPAGLDSFSQIGPPPSAAGDIGKLRVQTPLELWKEVYNKAF 286 Query: 305 PHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 P ++ +RK+LKDP +DPQ++E +D++RAQKDQ + +R Q Sbjct: 287 PLQTKSDRKDLKDPGRDPQYAEREVDAMRAQKDQRKKRRERGQ 329 >gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats. Identities = 213/364 (58%), Positives = 258/364 (70%), Gaps = 13/364 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPK+SSDTLWD+AAAEV SRES D E + +RTVF MGSKAGGKT+ILL+ L Sbjct: 1 MPKISSDTLWDLAAAEVNSRESEDDYGER-----NVAVERTVFLMGSKAGGKTSILLKCL 55 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE +KPTLALEYTFGRRARGHNTPKDIAH+WELGGG LSDLVQIPIT+ ++ FLSV+ Sbjct: 56 DRDEPSKPTLALEYTFGRRARGHNTPKDIAHIWELGGGTFLSDLVQIPITSADLKFLSVI 115 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------SGKQRVPRVLHKDY 174 L++DLSKPN LW T E LL + +EK + QK ++ + Q RVL DY Sbjct: 116 LIVDLSKPNELWGTTEKLLQVTQAHLEKAFSMAQKAQTAKPAATHQTATQSAARVLPADY 175 Query: 175 PDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLI-FTSSKSETT 233 PDRELIS FPVPLLIVGSK+DIFQ+FDS+K+K+I + LRF+AH Y ASLI Sbjct: 176 PDRELISAFPVPLLIVGSKYDIFQEFDSDKKKLIAQMLRFVAHSYAASLIVIHQXXXXXX 235 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 K++S D +KPL IPAGSDS SQIG P A +VDI +LHA+NP Sbjct: 236 XXXXXXXXXXXXXXXXXXKTVSMDLTKPLIIPAGSDSFSQIGSPCAADVDIASLHARNPK 295 Query: 294 DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKS 353 DLW+KV VFP E + ++LKDP KDPQ+SEP ID++RAQKDQEL+QYKR AK+W+ Sbjct: 296 DLWRKVCGCVFPPEKEHQ-QDLKDPAKDPQYSEPQIDAMRAQKDQELEQYKRNAAKTWQG 354 Query: 354 LALD 357 L L+ Sbjct: 355 LDLE 358 >gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_a [Mus musculus] Length = 527 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 124/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 63 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 110 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 111 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 170 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 171 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 230 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 231 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 290 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 291 AHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 350 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 351 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 395 >gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin light chain A [Monodelphis domestica] Length = 520 Score = 312 bits (801), Expect = 2e-83, Method: Composition-based stats. Identities = 73/347 (21%), Positives = 128/347 (36%), Gaps = 46/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V +G GKT+++ R Sbjct: 36 EEDDGQNLWSCILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGRIQG 84 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 R E K EY + + ++W L G + L++ + A+++ V+L Sbjct: 85 RPEECKKGRGAEYLYLSVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMEANSLRDTLVIL 144 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD----- 176 V+D+SKP ++++ R ++K+ ++ E R + + D Sbjct: 145 VVDMSKPWTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASP 204 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L VP+L+V +K D D+ E I Sbjct: 205 QRRSTLQEDKDDSVMLPLGADTLTYNLGVPVLVVCTKCDAISVLEKEHDYKDEHFDFIQS 264 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 265 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFKIPAVVVEKDAVFIPAGWDN 324 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 325 DKKIG---ILHENFQTLKAEDSFEDIITKPPVRKFVHEKEIVAEDDQ 368 >gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein light intermediate chain 2 [Monodelphis domestica] Length = 493 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 124/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + + G GKTT+L + + Sbjct: 28 EEDEGQNLWSSILSEVSTRSR-----------SKLPSGKNILVFGEDGSGKTTLLAKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E +K LEY + ++W L G + L++ ++A+ + V+ Sbjct: 76 GAEHSKKGRGLEYLYLNIHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAETLQETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q+ E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRDMEQKFVKDFQEYVEPEEGYQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLASAQDGENVILPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHVRKFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ +P+ D K + H+ ++ + Sbjct: 316 NEKKIA---ILHENFTTVKPDDPYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 126/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V G GKTT++ + + Sbjct: 24 EDDEGQNLWSSILSEVSTR-----------SSSKLPSGKNVLLFGEDGSGKTTLMSKL-Q 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR-------------------SG 162 V+D+S+P + E+++ R V+K+ ++ E S Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 163 KQRVPRVLHKDYP------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 ++R P +D D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVFIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + T+ ++PF D K + H+ ++ + Sbjct: 312 DKKIG---ILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQ 355 >gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|73919260|sp|Q8R1Q8|DC1L1_MOUSE Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|19484061|gb|AAH23347.1| Dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|74198263|dbj|BAE35301.1| unnamed protein product [Mus musculus] gi|148677352|gb|EDL09299.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] Length = 523 Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 71/345 (20%), Positives = 127/345 (36%), Gaps = 48/345 (13%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 LW +EV +R + P+ + V +G GKT+++ R ++ E Sbjct: 44 DGQNLWSCILSEVSTRSR-----------SKLPTGKNVLLLGEDGAGKTSLIRR-IQGIE 91 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + ++W L G + L++ + A ++ V+LV+D Sbjct: 92 EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVD 151 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD-------- 176 +SKP ++++ R V+K+ ++ E R + + D Sbjct: 152 MSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRR 211 Query: 177 ------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 L +P+L+V +K D D+ E I + Sbjct: 212 TTGAQEDRGDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHI 271 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 272 RKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDK 331 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 332 KIG---ILHENFQTLKVEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats. Identities = 73/345 (21%), Positives = 129/345 (37%), Gaps = 48/345 (13%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 LW +EV +R + P+ + V +G GKT+++ R ++ E Sbjct: 44 DGQNLWSCILSEVSTRSR-----------SKLPTGKNVLLLGEDGAGKTSLIRR-IQGIE 91 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + ++W L G + L++ + A ++ V+LV+D Sbjct: 92 EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVD 151 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRV 166 +SKP ++++ R V+K+ ++ E + QR Sbjct: 152 MSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRR 211 Query: 167 PRVLHKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 +D D L +P+L+V +K D D+ E I + Sbjct: 212 ATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHI 271 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 272 RKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDK 331 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 332 KIG---ILHENFQTLKIEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] gi|62531080|gb|AAH93336.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 126/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V G GKTT++ + + Sbjct: 24 EDDEGQNLWSSILSEVSTR-----------SSSKLPSGKNVLLFGEDGSGKTTLMSKL-Q 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR-------------------SG 162 V+D+S+P + E+++ R V+K+ ++ E S Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 163 KQRVPRVLHKDYP------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 ++R P +D D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVLIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + T+ ++PF D K + H+ ++ + Sbjct: 312 DKKIG---ILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQ 355 >gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculus] gi|74183685|dbj|BAE24463.1| unnamed protein product [Mus musculus] gi|74190862|dbj|BAE28215.1| unnamed protein product [Mus musculus] gi|74212500|dbj|BAE30992.1| unnamed protein product [Mus musculus] Length = 492 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 124/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [Danio rerio] Length = 500 Score = 309 bits (792), Expect = 2e-82, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 125/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V G GKTT++ + + Sbjct: 24 EDDEGQNLWSSILSEVSTR-----------SSSKLPSGKNVLLFGEDGSGKTTLMSKL-Q 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR-------------------SG 162 V+D+S+P + E+++ R V+K+ ++ E S Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 163 KQRVPRVLHKDYP------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 ++R P +D D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVFIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +I + T+ ++PF D K + H+ ++ + Sbjct: 312 DKKI---CILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQ 355 >gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] gi|73919263|sp|Q6PDL0|DC1L2_MOUSE Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|35193080|gb|AAH58645.1| Dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] Length = 492 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 124/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKKLAAEDEQ 360 >gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A isoform 2 [Pan troglodytes] gi|134047749|sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|119584837|gb|EAW64433.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_c [Homo sapiens] gi|124297735|gb|AAI31621.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] Length = 523 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 72/345 (20%), Positives = 130/345 (37%), Gaps = 48/345 (13%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 LW +EV +R + P+ + V +G GKT+++ + ++ E Sbjct: 44 DGQNLWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLIRK-IQGIE 91 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + ++W L G + L++ + A ++ V+LV+D Sbjct: 92 EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVD 151 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRV 166 +SKP ++++ R V+K+ ++ + + QR Sbjct: 152 MSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRR 211 Query: 167 PRVLHKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 +D D L +P+L+V +K D D+ E I + Sbjct: 212 NTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHI 271 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 272 RKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDK 331 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 332 KIG---ILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light chain-A [Canis familiaris] Length = 524 Score = 308 bits (790), Expect = 3e-82, Method: Composition-based stats. Identities = 72/345 (20%), Positives = 130/345 (37%), Gaps = 48/345 (13%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 LW +EV +R + P+ + V +G GKT+++ + ++ E Sbjct: 44 DGQNLWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLIRK-IQGIE 91 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + ++W L G + L++ + A ++ V+LV+D Sbjct: 92 EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAISLKDTLVMLVVD 151 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRV 166 +SKP ++++ R ++K+ ++ E + QR Sbjct: 152 MSKPWTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRR 211 Query: 167 PRVLHKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 +D D L +P+L+V +K D D+ E I + Sbjct: 212 NTGSQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHI 271 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 272 RKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDK 331 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 332 KIG---ILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIVAEDDQ 373 >gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Rattus norvegicus] gi|2494218|sp|Q62698|DC1L2_RAT Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|619665|gb|AAA80334.1| LIC-2 gi|149032345|gb|EDL87236.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_b [Rattus norvegicus] Length = 497 Score = 308 bits (789), Expect = 4e-82, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 124/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats. Identities = 72/345 (20%), Positives = 130/345 (37%), Gaps = 48/345 (13%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 LW +EV +R + P+ + V +G GKT+++ + ++ E Sbjct: 44 DGQNLWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLIRK-IQGIE 91 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + ++W L G + L++ + A ++ V+LV+D Sbjct: 92 EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVD 151 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRV 166 +SKP ++++ R V+K+ ++ + + QR Sbjct: 152 MSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRR 211 Query: 167 PRVLHKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 +D D L +P+L+V +K D D+ E I + Sbjct: 212 NTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHI 271 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 272 RKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDK 331 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 332 KIG---ILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] Length = 492 Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 124/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] gi|73919261|sp|Q9QXU8|DC1L1_RAT Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|6651427|gb|AAF22294.1|AF181992_1 dynein light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 307 bits (786), Expect = 9e-82, Method: Composition-based stats. Identities = 73/345 (21%), Positives = 128/345 (37%), Gaps = 48/345 (13%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 LW EV +R + P+ + V +G GKT+++ R ++ E Sbjct: 44 DGQNLWSRILREVSTRSR-----------SKLPTGKNVLLLGEDGAGKTSLIRR-IQGIE 91 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + ++W L G + L++ + A ++ V+LV+D Sbjct: 92 EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVD 151 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRV 166 +SKP ++++ R V+K+ ++ E + QR Sbjct: 152 MSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRR 211 Query: 167 PRVLHKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 +D D L +P+L+V +K D D+ E I + Sbjct: 212 ATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHI 271 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 272 RKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDK 331 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 332 KIG---ILHENFQTLKIEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light intermediate chain 2 isoform 3 [Bos taurus] Length = 492 Score = 307 bits (786), Expect = 9e-82, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 125/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYVEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKEAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light chain A [Gallus gallus] gi|2494217|sp|Q90828|DC1L1_CHICK Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) (LIC57/59) gi|510249|emb|CAA55698.1| dyenin light chain A [Gallus sp.] Length = 515 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 69/348 (19%), Positives = 133/348 (38%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS ++V +G GKT+++ + ++ Sbjct: 31 EEDDGQNLWSCILSEVSTRSR-----------SKLPSGKSVLLLGEDGAGKTSLIGK-IQ 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++ L G + L++ + A+++ ++L Sbjct: 79 GIEEYKKGRGMEYLYLNVHDEDRDDQTRCNVRILDGDLYHKGLLKFAMEANSLKDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGK 163 V+D+S+P ++++ R ++K+ ++ E + Sbjct: 139 VVDMSRPWTAMDSLQKWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFPASP 198 Query: 164 QRVPRVLHKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 QR L +D D L +P+++V +K D D+ E I Sbjct: 199 QRRNTSLQEDKDDSVILPLGADTLTCNLGIPVVVVCTKCDAISVLEKEHDYRDEHFDFIQ 258 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K + +I Q +G + IPAG D Sbjct: 259 SHIRRFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFNVPAVVVEKDAVFIPAGWD 318 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +IG + TL A++ F D +K + F HE ++ + Sbjct: 319 NDKKIG---ILHENFQTLKAEDSFEDSIRKPPVRKFVHEKEIVAEDDQ 363 >gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] gi|5531813|gb|AAD44481.1| dynein light chain-A [Homo sapiens] Length = 523 Score = 306 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 71/345 (20%), Positives = 129/345 (37%), Gaps = 48/345 (13%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 LW +EV +R + P+ + V +G GKT+++ + ++ E Sbjct: 44 DGQNLWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLIRK-IQGIE 91 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + ++W L G + L++ + A ++ V+LV+D Sbjct: 92 EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVD 151 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRV 166 +SKP ++++ R V+K+ ++ + + QR Sbjct: 152 MSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRR 211 Query: 167 PRVLHKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 +D D L +P+L+V +K D D+ E + Sbjct: 212 NTASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHI 271 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 272 RKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDK 331 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 332 KIG---ILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|55726458|emb|CAH89998.1| hypothetical protein [Pongo pygmaeus] Length = 492 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 124/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------AGSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Homo sapiens] Length = 492 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 124/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 304 bits (780), Expect = 4e-81, Method: Composition-based stats. Identities = 69/345 (20%), Positives = 128/345 (37%), Gaps = 48/345 (13%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 LW +EV +R + P+ + V +G GKT+++ + ++ E Sbjct: 44 DGQNLWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLIRK-IQGIE 91 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + ++W L G + L++ + A ++ V+LV+D Sbjct: 92 EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVD 151 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD-------- 176 +SKP ++++ R V+K+ ++ + R + + D Sbjct: 152 MSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQIEQKLIRDFQEYVEPGEDFPASPQGR 211 Query: 177 ------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 L +P+L+V +K D D+ E I + Sbjct: 212 NTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHI 271 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 272 RKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDK 331 Query: 273 QIGPPVATEVDIGTLHAKNPFD-LWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F+ + K + F HE ++ + Sbjct: 332 KIG---ILHENFQTLKAEDNFEGIITKPPVRKFVHEKEIMAEDDQ 373 >gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Homo sapiens] gi|3287825|sp|O43237|DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|2665836|gb|AAB88513.1| dynein light intermediate chain 2 [Homo sapiens] gi|119603445|gb|EAW83039.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|119603446|gb|EAW83040.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|158256964|dbj|BAF84455.1| unnamed protein product [Homo sapiens] Length = 492 Score = 304 bits (780), Expect = 5e-81, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 124/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 [Bos taurus] gi|86438315|gb|AAI12622.1| Similar to Dynein light intermediate chain 1, cytosolic (Dynein light chain A) (DLC-A) [Bos taurus] Length = 524 Score = 304 bits (778), Expect = 7e-81, Method: Composition-based stats. Identities = 72/345 (20%), Positives = 128/345 (37%), Gaps = 48/345 (13%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 LW +EV +R + P+ + V +G GKT+++ + ++ E Sbjct: 44 DGQNLWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLIRK-IQGIE 91 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + ++W L G L++ + A ++ V+LV+D Sbjct: 92 EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDPYHKGLLKFSLDAISLKDTLVMLVVD 151 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRV 166 +SKP ++++ R ++K+ ++ E + QR Sbjct: 152 MSKPWTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQRR 211 Query: 167 PRVLHKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 +D D L VP+L+V +K D D+ E I + Sbjct: 212 STASQEDRDDSVLLPLGADTLTQNLGVPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHI 271 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+LI+ S K + +I Q +G + IPAG D+ Sbjct: 272 RKFCLQYGAALIYASVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDK 331 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 332 KIG---ILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|67970473|dbj|BAE01579.1| unnamed protein product [Macaca fascicularis] Length = 492 Score = 303 bits (777), Expect = 1e-80, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 125/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS +++ G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKSILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-intermediate chain [Xenopus laevis] gi|28280005|gb|AAH45030.1| Dnclic1-prov protein [Xenopus laevis] Length = 508 Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats. Identities = 68/347 (19%), Positives = 126/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + P + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTRSR-----------SKLPFGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ + +V ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDDDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESR----SGK 163 V+D+S+P ++++ R V+K+ Q+ E + Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKLKIPPEEMREMEERIVRHFQEYVEPGDELPTSP 198 Query: 164 QRVPRVLHK-------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 QR + D L +P+++V +K D D+ E I Sbjct: 199 QRRNTSSDECDDSVILPLADDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFKMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 319 DKKIG---ILHENFQTLKPEDTFEDVITKPPVRKFVHEKEIVAEDDQ 362 >gi|157119433|ref|XP_001653379.1| conserved hypothetical protein [Aedes aegypti] gi|108883162|gb|EAT47387.1| conserved hypothetical protein [Aedes aegypti] Length = 347 Score = 302 bits (773), Expect = 3e-80, Method: Composition-based stats. Identities = 116/355 (32%), Positives = 191/355 (53%), Gaps = 25/355 (7%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 M +++T+ DIA V T+ + E P++RT+F +GSK GK+T++ RFL Sbjct: 10 MEPDTTETIQDIAMKLV------TEHMKQESSLTGGPTERTIFVLGSKGAGKSTLINRFL 63 Query: 61 ERDETAKPTLALEYTFGRRARGHNT-PKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 +RD+ +PTLALEY+FGRR K+I ++WELG ++ + L+++P+ + ++ + Sbjct: 64 DRDDITRPTLALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAAFAA 123 Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 V+VLDLS+P+ LW ++ +L + + K C+ E ++R+ + + D+ D Sbjct: 124 VIVLDLSQPDRLWTDLQCILNGLKQAISKNCSP----KEVSEMQERMKQKVGLDHEDLNT 179 Query: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 + P P++IVG K+D FQ+ DSE +K +C+ LR ++H GA+LIF +SK+ + R Sbjct: 180 LEILPFPVIIVGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRD 239 Query: 240 FINQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 +N L FG+ K+ + D + P+ +P G DS +IG IG Sbjct: 240 AMNHLGFGSPSNPFKATALDHNGPIVVPFGGDSWEKIGVTPTNSERIGMS---------- 289 Query: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 + P T + DP KD F E +ID +RAQKD EL + ++ K Sbjct: 290 --YSAQIPQVGTEKVSIPDDPAKDGGFKERVIDELRAQKDDELMRLLKDTEMRMK 342 >gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light intermediate chain 2, cytosolic (LIC53/55) (LIC-2) [Canis familiaris] Length = 481 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 121/340 (35%), Gaps = 48/340 (14%) Query: 10 WDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPT 69 W +EV +R + PS + + G GKTT++ + + E K Sbjct: 25 WSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-QGAEHGKKG 72 Query: 70 LALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPN 129 LEY + ++W L G + L++ ++A+++ V+ V D+S+P Sbjct: 73 RGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSRPW 132 Query: 130 ALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVPRVLH---- 171 + E+++ R ++K+ Q E G Q P+ Sbjct: 133 TVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEPEEGCQGSPQRRGPLTS 192 Query: 172 --------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 D L +P+L+V +K D D+ E I LR Sbjct: 193 GPDEENVALPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRRFCL 252 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 253 QYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFVTPALVVEKDAVFIPAGWDNEKKIA-- 310 Query: 278 VATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + T+ ++ + D K + H+ ++ + Sbjct: 311 -ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 349 >gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 [Xenopus tropicalis] gi|111305599|gb|AAI21354.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Xenopus tropicalis] Length = 508 Score = 301 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 125/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ + +V ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVP 167 V+D+S+P ++++ R V+K+ Q+ E P Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKLKIPPEEMKEMEEKIVRNFQEYVEPGEEFPASP 198 Query: 168 RVLH-----------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 + + + L +P+++V +K D D+ E I Sbjct: 199 QKRNTSSDEQDDSVILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFLFNMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 319 DKKIG---ILHENFQTLKPEDTFEDIITKPPVRKFVHEKEIVAEDDQ 362 >gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Gallus gallus] gi|53126839|emb|CAG30989.1| hypothetical protein [Gallus gallus] Length = 488 Score = 300 bits (769), Expect = 9e-80, Method: Composition-based stats. Identities = 66/347 (19%), Positives = 126/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + + G GKTT++ + ++ Sbjct: 24 EEEEGQNLWSSILSEVSTRSR-----------SKLPSGKNILVFGDDGSGKTTLMAK-IQ 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + + ++W L G + L++ ++A+++ VV Sbjct: 72 GAEHGKKGRGLEYLYLNIHDEDRDDQTRCNVWILDGDLYNKGLLKFAVSAESLQDTIVVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVP 167 V D+S+P + E+++ + ++K+ Q+ E G Q P Sbjct: 132 VADMSRPWTVMESLQKWASVLQEHIDKLKIPPEEMRDMEQKFIKEFQEYVEPEEGYQGSP 191 Query: 168 RVLH-----------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 + + L +P+L+V +K D D+ E I Sbjct: 192 QRRGPSSGQEDESVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K E + +I +G + + IPAG D+ Sbjct: 252 HIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFQFTTPALVVEKDAVFIPAGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +I + T+ + + D K + H+ ++ + Sbjct: 312 EKKIA---ILHENFTTVKPDDAYEDFIAKPPVRKLVHDKELAAEDEQ 355 >gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae str. PEST] gi|116118470|gb|EAA13896.3| AGAP010165-PA [Anopheles gambiae str. PEST] Length = 339 Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 123/356 (34%), Positives = 191/356 (53%), Gaps = 26/356 (7%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 M +++T+ DIA V + A P++RT+F +GSK GK+T++ RFL Sbjct: 1 MEVDTTETIQDIAIKLVTEQLRNESRL------ATTPTERTLFVLGSKGVGKSTLINRFL 54 Query: 61 ERDETAKPTLALEYTFGRRARGHNT-PKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 +RD+ +PTLALEY+FGR+ K+I ++WELG + S L+++PI + + S Sbjct: 55 DRDDVPRPTLALEYSFGRKTASGQGAQKNICNVWELGSLANSSQLIEMPIRSHGLQTFSC 114 Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 +++LDLS+P+ LW +ES+L + K A G+ K+ + + K++PD Sbjct: 115 IVMLDLSQPDRLWTDLESVLNGLKQATAKHAVA----GQIEEMKELTAQRIGKEHPDLST 170 Query: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 + FP P++IVG K+DI+Q+ DSE RK +C+ LR +AH GA+L++ S+K+ + R Sbjct: 171 LELFPFPIVIVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRD 230 Query: 240 FINQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 +N L FG+ ++ S D S PLAIP G+DS ++IG + IG Sbjct: 231 TMNHLGFGSPSNPFRAASFDHSSPLAIPFGADSWARIGVTPSNSERIGLS---------- 280 Query: 298 KVFEKVFPHESTRERKEL-KDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 F P L DP KD F E ID +R+QKD+EL ++ K Sbjct: 281 --FSTQIPQLPIGNGGILPDDPAKDAGFKEASIDELRSQKDEELMYVLKDTEIRMK 334 >gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] gi|11992258|gb|AAG42486.1|AF317841_1 cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] Length = 508 Score = 296 bits (758), Expect = 2e-78, Method: Composition-based stats. Identities = 68/347 (19%), Positives = 125/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ NV ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSG----K 163 V+D+S+P ++++ R ++K+ Q+ E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 164 QRVPRVLHK-------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 QR + + L +P+++V +K D D+ E I Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 319 DKKIG---ILHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQ 362 >gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon nigroviridis] Length = 463 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 60/337 (17%), Positives = 119/337 (35%), Gaps = 46/337 (13%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 ++V +R + PS + + G GKTT++ + E E K Sbjct: 1 SSILSDVSTR-----------SSSKLPSGKNILVFGEDGSGKTTLMAKL-EGAEHNKKGR 48 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + ++W L G + L++ ++A ++S V V+D+S+P Sbjct: 49 GLEYLYLSVHDEDRDDLTRCNVWILDGDLYHKGLLKFAVSAKSLSDCLAVFVVDMSRPWI 108 Query: 131 LWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP--------------- 175 + ++++ R+ ++K+ E + + + Sbjct: 109 IMDSLQKWSSVLRDHLDKLKIEPDVMREMEQKMVKAFQEYSEPEDANSSSPQRRAPTAGE 168 Query: 176 ---------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYG 220 + L +P+L+V +K D D+ E I +R YG Sbjct: 169 DEAVVLPLGENTLTHNLGIPVLVVCTKCDAVSVLEKEHDYKEEHFDFIQSHIRKFCLQYG 228 Query: 221 ASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVAT 280 A L +TS K E + +I + + + IP+G D+ +I Sbjct: 229 AGLFYTSVKEEKNLDLLYKYIVHKLYDFQFTTPALVVEKDAVFIPSGWDNEKKIA---IL 285 Query: 281 EVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 ++ T+ ++PF D K + HE ++ + Sbjct: 286 HENLSTVRPEDPFEDFIAKPPVRKLVHEKEINAEDEQ 322 >gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] Length = 508 Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 68/347 (19%), Positives = 125/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTRSR-----------SKLPSGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ NV ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSG----K 163 V+D+S+P ++++ R ++K+ Q+ E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 164 QRVPRVLHK-------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 QR + + L +P+++V +K D D+ E I Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 319 DRKIG---ILHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQ 362 >gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Xenopus laevis] gi|112419317|gb|AAI22489.1| MGC154222 protein [Xenopus laevis] Length = 487 Score = 292 bits (749), Expect = 2e-77, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 122/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW ++V + + PS + + G GKTT++ + + Sbjct: 21 EEDEGQSLWSSILSDVST-----------SARSKLPSGKNILVFGEDGSGKTTLMAKL-Q 68 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ + A+++S V Sbjct: 69 GAEHNKKGRGLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESISETVAVF 128 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E++ R ++K+ Q+ E P Sbjct: 129 VGDMSRPWTIMESLLKWASVLREHIDKLKIPPEEMRELEQKIIKDFQEYVEPEEALSGSP 188 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 189 QRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDFIQ 248 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YG++LI+TS K E + +I + ++ + IPAG D Sbjct: 249 SHIRKFCLQYGSALIYTSVKEEKNLDLLYKYIVHKTYNFHFNRAAMVVEKDSVFIPAGWD 308 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +IG + T+ ++ + D K + H+ ++ + Sbjct: 309 NEKKIG---ILHENFSTVKPEDAYEDFIVKPPVRKLVHDKEVAAEDEQ 353 >gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] Length = 335 Score = 291 bits (746), Expect = 5e-77, Method: Composition-based stats. Identities = 69/332 (20%), Positives = 124/332 (37%), Gaps = 48/332 (14%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 LW +EV +R + P+ + V +G GKT+++ + ++ E Sbjct: 18 DGQNLWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLIRK-IQGIE 65 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + ++W L G + L++ + A ++ V+LV+D Sbjct: 66 EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVD 125 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------SGKQRV 166 +SKP ++++ R V+K+ ++ + + QR Sbjct: 126 MSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRR 185 Query: 167 PRVLHKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 +D D L +P+L+V +K D D+ E I + Sbjct: 186 NTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHI 245 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 246 RKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDK 305 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKV 303 +IG + TL A++ F D+ K + Sbjct: 306 KIG---ILHENFQTLKAEDNFEDIITKPPVRK 334 >gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] Length = 480 Score = 287 bits (734), Expect = 9e-76, Method: Composition-based stats. Identities = 62/348 (17%), Positives = 118/348 (33%), Gaps = 50/348 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW ++V + + PS + + G GKTT++ + + Sbjct: 16 EEDEGQSLWSSILSDVST-----------SARSKLPSGKNILVFGEDGSGKTTLVAKL-Q 63 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ + A+++ V Sbjct: 64 GAEHNKKGRGLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESIGETVAVF 123 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E++ R ++K+ Q+ E P Sbjct: 124 VGDMSRPWTIMESLLKWASVLREHIDKLKIPPEEIRELEQKIIKDFQEYVEPEDALSGSP 183 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 184 QRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDFIQ 243 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K E + +I + + + IPAG D Sbjct: 244 SHIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYNFHFNCAAMVVEKDSVFIPAGWD 303 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +IG + ++ + D K + H+ ++ + Sbjct: 304 NEKKIG---ILHENF--SKPEDAYEDFIVKPPVRKLVHDKEVAAEDEQ 346 >gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70877049|gb|EAN90434.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 422 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 184/380 (48%), Gaps = 41/380 (10%) Query: 1 MPKVSSDTLWDIAAAEV-RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRF 59 MP+V+ D D+ + +RE++ + ++ V +G+ GGKT++L R Sbjct: 50 MPQVTVDPTKDLWQNIILNTRENQVTQ-----------TEVNVLIVGTSGGGKTSLLRRI 98 Query: 60 LERDETA-----------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIP 108 T+ KPT AL+Y+F RR H +AH WEL G+ LS L ++ Sbjct: 99 FSGVNTSSSSVPKSFLRVKPTTALDYSFVRRNDRHIA--QVAHFWELAQGMELSQLCEVV 156 Query: 109 ITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRV 166 IT +NV + + +V+D S+P+ +W+T+ + +V ++ ++ G + K R Sbjct: 157 ITPENVHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRA 216 Query: 167 PRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFT 226 R++ ++PD + VP +I+ +K D F + K + +++RF+AH YGA L+FT Sbjct: 217 KRLVGMEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFT 275 Query: 227 SSKSETTMSKSRSFINQLAFGTER-PKSISTDPSK-PLAIPAGSDSLSQIGPPVATEVDI 284 S K R+ +N L F + K I DP + + + +D+ + IG P +++ Sbjct: 276 SDAEAI---KLRAVMNHLVFVSTFDLKHIELDPERGAVLVIPSADTFADIGEPAVSDMGG 332 Query: 285 GTLHAKNPFDLWKKVFEKVFPHESTRER-------KELKDPVKDPQFSEPLIDSIRAQKD 337 D WK + +FP + + R K L D + F EP +D++R QK+ Sbjct: 333 LQSTGDAELDRWKAPLDAMFPAKQSEGRMQNDSFLKRLYD-TGENGFGEPTVDAVRKQKE 391 Query: 338 QELDQYKREQAKSWKSLALD 357 EL+QY++ K KS D Sbjct: 392 DELEQYRKSAFKREKSTKDD 411 >gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632687|emb|CAM56700.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 489 Score = 286 bits (733), Expect = 1e-75, Method: Composition-based stats. Identities = 63/345 (18%), Positives = 123/345 (35%), Gaps = 45/345 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V MG GKTT++ + + Sbjct: 25 EEEDGQNLWSSILSEVSTRSR-----------SKLPSGKNVVVMGEVGSGKTTLVAKL-Q 72 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E LEY + + + W L G + L + I+ +N+ ++ Sbjct: 73 GVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 132 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE----------------------- 158 V+DLS+P ++++ R+ V+K+ + E Sbjct: 133 VVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVP 192 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 R + + + L +P+++V +K D D+ E I + Sbjct: 193 QRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHI 252 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+L++TS K + ++ +G + IP+G D+ Sbjct: 253 RRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEK 312 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +I + + A++ F D+ K + F HE + ++ + Sbjct: 313 KIA---ILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQ 354 >gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] Length = 485 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 63/345 (18%), Positives = 123/345 (35%), Gaps = 45/345 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V MG GKTT++ + + Sbjct: 21 EEEDGQNLWSSILSEVSTRSR-----------SKLPSGKNVVVMGEVGSGKTTLVAKL-Q 68 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E LEY + + + W L G + L + I+ +N+ ++ Sbjct: 69 GVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 128 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE----------------------- 158 V+DLS+P ++++ R+ V+K+ + E Sbjct: 129 VVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVP 188 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 R + + + L +P+++V +K D D+ E I + Sbjct: 189 QRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHI 248 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+L++TS K + ++ +G + IP+G D+ Sbjct: 249 RRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEK 308 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +I + + A++ F D+ K + F HE + ++ + Sbjct: 309 KIA---ILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQ 350 >gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light intermediate chain 1 [Danio rerio] gi|94733316|emb|CAK11123.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632686|emb|CAM56699.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 501 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 63/345 (18%), Positives = 123/345 (35%), Gaps = 45/345 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V MG GKTT++ + + Sbjct: 27 EEEDGQNLWSSILSEVSTRSR-----------SKLPSGKNVVVMGEVGSGKTTLVAKL-Q 74 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E LEY + + + W L G + L + I+ +N+ ++ Sbjct: 75 GVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 134 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE----------------------- 158 V+DLS+P ++++ R+ V+K+ + E Sbjct: 135 VVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVP 194 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 R + + + L +P+++V +K D D+ E I + Sbjct: 195 QRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHI 254 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+L++TS K + ++ +G + IP+G D+ Sbjct: 255 RRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEK 314 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +I + + A++ F D+ K + F HE + ++ + Sbjct: 315 KIA---ILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQ 356 >gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic, light intermediate polypeptide 2 [Macaca mulatta] Length = 497 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 65/353 (18%), Positives = 123/353 (34%), Gaps = 53/353 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSK-----------FDIFQDFDSEK 204 + D L +P+L+V +K F + Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKVRARGLLAWLGSGSEHAFREKN 255 Query: 205 RKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 ++ LR YGA+LI+TS K E + +I +G + I Sbjct: 256 VRIFDSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFI 315 Query: 265 PAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 PAG D+ +I + T+ ++ + D K + H+ ++ + Sbjct: 316 PAGWDNEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 365 >gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 374 Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 116/331 (35%), Gaps = 47/331 (14%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S +EV +R + PS +T+ +G GKTT++ + + E Sbjct: 58 PSGPSTSSILSEVSTRSR-----------SKLPSGKTILVLGDNGSGKTTLMAKL-QGAE 105 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 + LEY + ++W L G I L++ ++A+++ V+ V+D Sbjct: 106 HGQKGRGLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVD 165 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVL 170 +S+P E++E G R ++K+ Q+ E Q + Sbjct: 166 MSRPWTAMESLEKWAGVLREHIDKLKIPPEETRGMQQKIIKEFQEYVEPEEAYQGSSQRR 225 Query: 171 HKDY-----------PDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLR 213 + L +P+L+V +K D + + E I +R Sbjct: 226 GPSSGQENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIR 285 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 YGA+LI+TS K E + ++ +G + + IPAG D+ + Sbjct: 286 RFCLQYGAALIYTSVKGEKNLDLLYKYLVHKMYGFQLTTPALVVEKDAVFIPAGWDNEKK 345 Query: 274 IGPPVATEVDIGTLHAKNPF-DLWKKVFEKV 303 I + + + D K + Sbjct: 346 IA---ILHENFTRVKPGYAYEDFIAKPRVRK 373 >gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon nigroviridis] Length = 400 Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats. Identities = 64/318 (20%), Positives = 119/318 (37%), Gaps = 32/318 (10%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E + + PS + V MG GKTT++ + DE LEY + Sbjct: 6 EVSTHSRSKLPSGKNVLVMGEVGSGKTTLVAKLQGVDE-YMKGRGLEYLYFSVHDDDIDD 64 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 + W L G + L + + D++ +++ +D+S+P ++++ AR + Sbjct: 65 HARCNAWVLDGDLYHKGLQGVAVPVDSIGNTLLLITVDMSRPWNALDSLQKWAAVAREHI 124 Query: 147 EKV--------------CAALQKTGESRSGKQRVPRVLHKDYP-------DRELISPFPV 185 +K+ Q+ E SG+ P+ +D D L + Sbjct: 125 DKLRVAPETLRELEHNLVKQFQEYVEPGSGEDGTPQRRSEDEESILLPLGDSTLTHNLGI 184 Query: 186 PLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 P+++V +K D D+ E I LR YGASL++TS K + Sbjct: 185 PVVVVCTKCDAIGTLEKEHDYRDEHLDFIQSHLRRFCLQYGASLVYTSVKEMKNLDILYK 244 Query: 240 FINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKK 298 ++ +G P + IP+G D+ +I + T + + F D+ K Sbjct: 245 YLVHRLYGFPFPCPAQVVERDAVFIPSGWDNEKKIA---ILHENFQTFKSDDTFEDVIVK 301 Query: 299 VFEKVFPHESTRERKELK 316 + HE + ++ + Sbjct: 302 PPVRKIVHEKEIQAEDDQ 319 >gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein, partial [Gallus gallus] Length = 388 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 62/338 (18%), Positives = 119/338 (35%), Gaps = 47/338 (13%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 +EV +R + PS +T+ +G GKTT++ + + E + Sbjct: 1 SSILSEVSTRSR-----------SKLPSGKTILVLGDNGSGKTTLMAKL-QGAEHGQKGR 48 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + ++W L G I L++ ++A+++ V+ V+D+S+P Sbjct: 49 GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWT 108 Query: 131 LWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVPRVLHKDY-- 174 + E++E G R ++K+ Q+ E Q + Sbjct: 109 VMESLEKWAGVLREHIDKLKIPPEEMRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQ 168 Query: 175 ---------PDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + L +P+L+V +K D + + E I +R Y Sbjct: 169 ENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQY 228 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 GA+LI+TS K E + ++ +G + + IPAG D+ +I Sbjct: 229 GAALIYTSVKGEKNLDLLYKYLVHKMYGFQLTTPALVVEKDAVFIPAGWDNEKKIA---I 285 Query: 280 TEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + + + D K + H + + Sbjct: 286 LHENFTRVKPGYAYEDFIAKPRVRKLVHTELVTAEADQ 323 >gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A isoform 1 [Pan troglodytes] Length = 472 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 69/330 (20%), Positives = 123/330 (37%), Gaps = 44/330 (13%) Query: 20 RESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRR 79 RE + + PS G GKT+++ + ++ E K LEY + Sbjct: 4 REGEHETLDPGPAGTRPPS-------GEDGAGKTSLIRK-IQGIEEYKKGRGLEYLYLNV 55 Query: 80 ARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLL 139 + ++W L G + L++ + A ++ V+LV+D+SKP ++++ Sbjct: 56 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWA 115 Query: 140 GSARNQVEKVCAALQKTGESR------------------SGKQRVPRVLHKDYPDR---- 177 R V+K+ ++ + + QR +D D Sbjct: 116 SVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVLP 175 Query: 178 ----ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTS 227 L +P+L+V +K D D+ E I +R YGA+LI+TS Sbjct: 176 LGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTS 235 Query: 228 SKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTL 287 K + +I Q +G + IPAG D+ +IG + TL Sbjct: 236 VKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG---ILHENFQTL 292 Query: 288 HAKNPF-DLWKKVFEKVFPHESTRERKELK 316 A++ F D+ K + F HE ++ + Sbjct: 293 KAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 322 >gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin light chain A [Ornithorhynchus anatinus] Length = 471 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 65/324 (20%), Positives = 126/324 (38%), Gaps = 37/324 (11%) Query: 26 EEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNT 85 ++ +H ++ T + G GKT+++ + ++ + K +EY + Sbjct: 1 MALSQAPSSHLLAKGTAWGQGEDGAGKTSLIGK-MQGIDEYKKGRGMEYLYLNVHDEDRD 59 Query: 86 PKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 + ++W L G + L++ + A+++ V+LV+D+SKP ++++ R Sbjct: 60 DQTRCNVWILDGDLYHKGLLKFAMDANSLKDTLVMLVVDMSKPWTALDSLQKWASVVREH 119 Query: 146 VEKVCAALQKTGESR------------------SGKQRVPRVLHKDYPDR--------EL 179 ++K+ ++ E + QR +D D L Sbjct: 120 IDKLKIPPEEMKEMEQKLIRDFQEYIEPGEDFPASPQRRNTTSQEDKDDSVILPLGADTL 179 Query: 180 ISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 +P+L+V +K D D+ E I +R YGA+LI+TS K Sbjct: 180 TYNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKN 239 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 + +I Q +G + IPAG D+ +IG + TL A++ F Sbjct: 240 IDLVYKYIVQKLYGFPFKIPAVVVEKDAVFIPAGWDNDKKIG---ILHENFQTLKAEDSF 296 Query: 294 -DLWKKVFEKVFPHESTRERKELK 316 D+ K + F HE ++ + Sbjct: 297 EDIIIKPPVRKFVHEKEIVAEDDQ 320 >gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein light intermediate chain 2, partial [Equus caballus] Length = 490 Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 66/348 (18%), Positives = 119/348 (34%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 26 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 73 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 74 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 133 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 134 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEPEEGCQGSP 193 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 194 QRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQ 253 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI TS K ++ I S PAG D Sbjct: 254 SHLRRFCLQYGAALIDTSVKEAKSLDLKNKCIIHPTSNDPVTSPGKASQSLFAFRPAGWD 313 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 314 NEKKIA---ILHENFTTVKPEDVYEDFIVKPPVRKLVHDKELAAEDEQ 358 >gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melanogaster] gi|22946025|gb|AAF52775.2| CG3769-PA [Drosophila melanogaster] gi|66770889|gb|AAY54756.1| IP11319p [Drosophila melanogaster] Length = 368 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 180/347 (51%), Gaps = 19/347 (5%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 + ++ ++ DIA R + + + E P +RT+ +GSK GKTT + +F +R Sbjct: 26 ESATPSIQDIAG-----RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 Query: 63 DET-AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 +E +PTLALEY+FGRR +P+ + ++WELG + L+++P+ + L+V+L Sbjct: 81 EEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELIS 181 +LDLS+P W +E R+ +++ + +QR + + D E + Sbjct: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL-REILEQRTVERVGQQNKDSEKLD 198 Query: 182 PFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFI 241 P P P++IVG K+D+F FD RK C+ LR +AH G +L+F S K R I Sbjct: 199 PLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI 258 Query: 242 NQLAFGTE--RPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKV 299 L FG+ +S D ++PL I G+DS S+IG A V+ + A ++ + Sbjct: 259 CHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQLQ 316 Query: 300 FEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 EK + KE DP KDP F E +ID IR+QK++EL R+ Sbjct: 317 LEKQ-------KLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRD 356 >gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated family member (xbx-1) [Caenorhabditis elegans] gi|77799271|emb|CAB01645.2| Hypothetical protein F02D8.3 [Caenorhabditis elegans] Length = 370 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 123/355 (34%), Positives = 206/355 (58%), Gaps = 21/355 (5%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHF------------PSQRTVFFMGSKAGGKTTI 55 +WD+A ++ + R E + + +D + + + F G++ GK++ Sbjct: 2 NIWDLAKQKLVENKQRAAELKQKLDDENGTQSDNYLSEVRRRHESHIIFAGNRKSGKSSF 61 Query: 56 LLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVS 115 +L FLER E K ++ LEYT+ RR RG+ KDIA+LWELGGG ++++L+ +PIT NV Sbjct: 62 MLNFLERKEDLKDSVGLEYTYARRTRGN--VKDIANLWELGGGATVTELLSVPITMKNVE 119 Query: 116 FLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP 175 S++L+LD++ + +W T+E + S R VE + ++R ++ R+ D Sbjct: 120 ICSLILLLDMTNLDEMWITIEKTVDSVRRLVENL-ERQDINLQTRLAEKMRLRLEKYDDG 178 Query: 176 DRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMS 235 ++ +P P+P+ IV SK+D FQ+F+SEKR+ +C+ LRFLA+ YGA+L+ SS+ E Sbjct: 179 SLKMCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPK 238 Query: 236 KSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDL 295 ++ + AFGT P+ TD +KP+ + G DSL IG P A++ +G A +PF+L Sbjct: 239 LVKNMTSHFAFGTVCPQGYMTDHNKPMFVKCGFDSLESIGIPPASDNFMG---ASSPFNL 295 Query: 296 WKKVFEKVFPHES---TRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 W++ F ++P ++ E + +DP+ DP F EP ID++ K +EL + R + Sbjct: 296 WRESFISLWPQKTGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKELKNHIRSK 350 >gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosophila melanogaster] gi|24641224|ref|NP_727500.1| Dlic2 CG1938-PC, isoform C [Drosophila melanogaster] gi|24641226|ref|NP_727501.1| Dlic2 CG1938-PD, isoform D [Drosophila melanogaster] gi|16182605|gb|AAL13531.1| GH06357p [Drosophila melanogaster] gi|22832089|gb|AAF48011.2| CG1938-PA, isoform A [Drosophila melanogaster] gi|22832090|gb|AAN09288.1| CG1938-PC, isoform C [Drosophila melanogaster] gi|22832091|gb|AAN09289.1| CG1938-PD, isoform D [Drosophila melanogaster] Length = 493 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 128/365 (35%), Gaps = 53/365 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 + LW EV+++ S PS ++V +G A GKTT++ + + E Sbjct: 28 ENLWSAILNEVQTQGS-----------TKLPSNKSVLVLGDNATGKTTLIAKL-QGVEDP 75 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + + +W L G ++L+ + N + V+L + ++ Sbjct: 76 KKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMT 135 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKT--------------------GESRSGKQRV 166 +P E + + ++ + ++ + S +R Sbjct: 136 QPWGWLEQLNHWIKVLGQHIDSLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRT 195 Query: 167 PRVLHKDYPDR------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 R D D LI+ + +++V +K D ++ E I + +R Sbjct: 196 MRNNSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRN 255 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 +G SL +TS K + ++ +G + IPAG DSL +I Sbjct: 256 FCLRHGTSLFYTSVKEDKNCDVLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLKKI 315 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIR 333 ++ + A+NP+ D+ K + E + +D Q I Sbjct: 316 S---ILYENMHGVKAENPYTDIIKSPPTRKAVSNREAEVQ-----TEDEQAFLARQQEIL 367 Query: 334 AQKDQ 338 Q DQ Sbjct: 368 KQGDQ 372 >gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] Length = 358 Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats. Identities = 109/323 (33%), Positives = 169/323 (52%), Gaps = 14/323 (4%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET-AKPTLALEYTFGRRARGHNT 85 + E P +RT+ +GSK GKTT + +F +R+E +PTLALEY+FGRR + Sbjct: 35 LLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS 94 Query: 86 PKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 P+ + ++WELG + L+++P+ + L+V+L+LDLS+P W +E R+ Sbjct: 95 PQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDT 153 Query: 146 VEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKR 205 +++ + +QR + + D E + P P P++IVG K+D+F FD R Sbjct: 154 AQQMMEKVTPEL-REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIR 212 Query: 206 KVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTE--RPKSISTDPSKPLA 263 K C+ LR +AH G +L+F S K R I L FG+ +S D ++PL Sbjct: 213 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 272 Query: 264 IPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQ 323 I G+DS S+IG A V+ + A ++ + EK + KE DP KDP Sbjct: 273 IWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQLQLEKQ-------KLKETTDPAKDPG 323 Query: 324 FSEPLIDSIRAQKDQELDQYKRE 346 F E +ID IR+QK++EL R+ Sbjct: 324 FKELVIDEIRSQKNEELAGLMRD 346 >gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] gi|39583371|emb|CAE66345.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] Length = 366 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 112/355 (31%), Positives = 197/355 (55%), Gaps = 25/355 (7%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPS------------QRTVFFMGSKAGGKTTI 55 +WD+A ++ + R E E + +D + + + G++ I Sbjct: 2 NIWDLAKQKLVENKQRAAELEQKLDDENGAVNDNYLAEVRRRHESHIIIAGNRQI----I 57 Query: 56 LLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVS 115 + E + LE+T+ RR RG+ KD+A+LWELGGG S+++L+ +PITA NV Sbjct: 58 IHVEFSGAERRFERIGLEFTYARRTRGN--VKDVANLWELGGGSSVTELLSVPITAKNVE 115 Query: 116 FLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP 175 S++++LD++ + +W T+E + + R VE + ++R ++ R+ + Sbjct: 116 TCSLIVLLDMTNLSEMWITIEKTVDTVRRLVENL-ERQDANLQTRMAEKSRLRLEKYESS 174 Query: 176 DRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMS 235 ++ +P P+P+ IV +K+D FQ+F+SEKR+ +C+ LRFLA+ YGA+L+ SS+ E Sbjct: 175 SLKMCAPCPLPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPK 234 Query: 236 KSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDL 295 ++ I+ AFGT P+ TD +KP+ I G D+L IG P ++ +G A +PF+L Sbjct: 235 LVKNMISHFAFGTVCPQGYITDHNKPMFIKCGFDNLEAIGIPPGSDNFMG---ASSPFNL 291 Query: 296 WKKVFEKVFPHESTR---ERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 W++ F ++P ++ E + +DP+ DP F EP ID++ K +EL+ + R + Sbjct: 292 WRESFISLWPQKTGNVDVEDTKKQDPMIDPVFKEPSIDNLVEIKRKELENHIRSK 346 >gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 3 [Canis familiaris] Length = 225 Score = 265 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 130/225 (57%), Positives = 167/225 (74%), Gaps = 3/225 (1%) Query: 135 MESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPFPVPLLIVGS 192 ME+LL + ++ V+K+ L KT +Q++ + KD+PDREL+ PF +PL+I+GS Sbjct: 1 MENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIPLVIIGS 60 Query: 193 KFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 K+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R INQLAFG ++ K Sbjct: 61 KYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKVRGVINQLAFGIDKSK 119 Query: 253 SISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRER 312 SI D +KPL I AG DSLSQIG P + DIG LHA +P DLWKKV+E+VFP +ST Sbjct: 120 SICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVFPPKSTNTL 179 Query: 313 KELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 180 KHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWKQIELD 224 >gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoobscura] gi|54645577|gb|EAL34315.1| GA17674-PA [Drosophila pseudoobscura] Length = 368 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 22/347 (6%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 ++ ++ DIA R + + + E P +RT+ +GSK GK+T + +F +R+E Sbjct: 28 ATPSIQDIAG-----RLAEEQQRLRQLEATSMPKERTLLVLGSKCVGKSTAINKFFDREE 82 Query: 65 TA-KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVL 123 +PTLALEY+FGRR +P+ + ++WELG + L+++P+ + L+V +++ Sbjct: 83 HTTRPTLALEYSFGRRIGSGRSPQ-VINVWELGSLDNADQLLEVPMRTHGLQQLAVFIMV 141 Query: 124 DLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPF 183 DLS+P W +E R +++ A + ++ + RV H++ D + Sbjct: 142 DLSQPQRFWTDLECAYKGLRVTSQELLARMTPELRETLEQRTLERVGHQNKEDLGTLELL 201 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P P++IVG K+D+F D +K IC+ LR +AH G +L+F S K R I+ Sbjct: 202 PFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGALLFYSQKVPKLSKVLRDTISH 261 Query: 244 LAFGTE--RPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFE 301 + FG+ +S TD ++PL++ G+DS S+IG A V + F Sbjct: 262 MGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDTGAQSV-----------ERIGATFG 310 Query: 302 KVFP--HESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 P + ++ +DP KDP F E LID +RAQK++EL R+ Sbjct: 311 VAVPQLQLEKQLQQVPQDPAKDPGFKESLIDEMRAQKNEELATIMRD 357 >gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoobscura] gi|54643019|gb|EAL31763.1| GA15140-PA [Drosophila pseudoobscura] Length = 499 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 67/366 (18%), Positives = 127/366 (34%), Gaps = 53/366 (14%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 + LW EV+++ S P+ ++V +G A GKTT++ + + E Sbjct: 30 ENLWSAILNEVQTQGS-----------TKLPANKSVLVLGDNATGKTTLIAKL-QGVEDP 77 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + + +W L G ++L+ + N + V+L + ++ Sbjct: 78 KKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHFALNETNYAHTLVILTVSMT 137 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKT--------------------GESRSGKQRV 166 +P E + + +E + + + S +R Sbjct: 138 QPWGWLEQLNHWIKVLGQHIESLPLEAKDKEMARQRLATTWQSYCEVGDDLDPGSPVKRT 197 Query: 167 PRVLHKDYPDR------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 R D D LI+ + +++V +K D ++ E I + +R Sbjct: 198 MRNNSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRS 257 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 GASL +TS K + ++ +G + IPAG DSL +I Sbjct: 258 FCLRTGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLKKI 317 Query: 275 GPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIR 333 ++ + A++P+ D+ K + E + +D Q I Sbjct: 318 S---ILYENMHGIKAESPYSDVIKAPPTRKAVSNREVEVQ-----TEDEQTFLARQQEIL 369 Query: 334 AQKDQE 339 Q Q+ Sbjct: 370 KQAGQD 375 >gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Trypanosoma brucei TREU927] gi|70835124|gb|EAN80626.1| dynein light intermediate chain, putative [Trypanosoma brucei] Length = 418 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 95/375 (25%), Positives = 166/375 (44%), Gaps = 39/375 (10%) Query: 3 KVSSDTLWDIAAAE-VRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL- 60 ++ D D+ + ++E+ + S+ +F +G GKT+++ R Sbjct: 57 QIVVDPTKDLWQNIALNTKENNLPQ-----------SEANLFVVGCSGAGKTSVIQRVCS 105 Query: 61 ----------ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPIT 110 + KPT AL+Y + R+ H H WEL G+ LS L ++ IT Sbjct: 106 AIGAGGNTSGKGKTKVKPTTALDYQYTTRSDRH--VSQTVHFWELAQGMELSQLCEVVIT 163 Query: 111 ADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRVPR 168 +NV + + +V+D S P+++W+T+ L + ++ ++ G + K R R Sbjct: 164 PENVHLMHIAIVVDFSDPSSMWDTLAYWLKRVDRRANEILQKMRAKGSNTPDKLHARAQR 223 Query: 169 VLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSS 228 L + +PD + + +P +IV +K D F E+ K + + LRF+AH YGA L+F+S Sbjct: 224 ALGEGHPDLKRVRLSGLPTVIVCNKVDAFPG-PMEQMKTLTRCLRFIAHLYGAYLVFSSD 282 Query: 229 KSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPV-ATEVDIGT- 286 + + + L R + + L +P D+ IG P G Sbjct: 283 ADSAKLRLLLNHLLFLTPFDARQVELDVERGTILIMPEN-DTFVDIGDPPLCDGPSGGPV 341 Query: 287 --LHAKNPFDLWKKVFEKVFPHESTRERKELKDPVK------DPQFSEPLIDSIRAQKDQ 338 + D WK + +FP ++ R + +K + F EP ID+IR QKD+ Sbjct: 342 TQSTGDSELDRWKVPLDAMFPPKAGGGRAQSDAMLKRLYDMGEGGFGEPTIDTIRRQKDE 401 Query: 339 ELDQYKREQAKSWKS 353 EL+QY++ A+ K Sbjct: 402 ELEQYRKSAARRDKG 416 >gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] Length = 433 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 55/302 (18%), Positives = 110/302 (36%), Gaps = 34/302 (11%) Query: 45 MGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDL 104 MG GKTT++ + + E LEY + + + W L G + L Sbjct: 1 MGEVGSGKTTLVAKL-QGVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGL 59 Query: 105 VQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE------ 158 + I+ +N+ ++ V+DLS+P ++++ R+ V+K+ + E Sbjct: 60 QKFAISLENLEDSLILFVVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLT 119 Query: 159 -----------------SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF---- 197 R + + + L +P+++V +K D Sbjct: 120 KQFQEYVEPGSDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLE 179 Query: 198 --QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 D+ E I +R YGA+L++TS K + ++ +G Sbjct: 180 KEHDYKDEHLDFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQ 239 Query: 256 TDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKE 314 + IP+G D+ +I + + A++ F D+ K + F HE + ++ Sbjct: 240 VVEKDSVFIPSGWDNEKKIA---ILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAED 296 Query: 315 LK 316 + Sbjct: 297 DQ 298 >gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chain [Rattus norvegicus] gi|50927372|gb|AAH79201.1| Dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 311 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 152/251 (60%), Positives = 186/251 (74%), Gaps = 11/251 (4%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R + + E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRRCHGSDGDGME-----IGEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L K +QR+ V+ KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVTMKLGKANSKASSEMRQRMWSVMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKMR 231 Query: 239 SFINQLAFGTE 249 INQLAFG + Sbjct: 232 GVINQLAFGID 242 >gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella vectensis] gi|156225136|gb|EDO45956.1| predicted protein [Nematostella vectensis] Length = 422 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 61/340 (17%), Positives = 122/340 (35%), Gaps = 40/340 (11%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 + PS +++ +G+ GKTT++ + +++ LEYT+ Sbjct: 6 DVQSSASRKLPSHKSIILIGNDESGKTTLISKLRGKEDDISKGHGLEYTYLEVHDEEIDD 65 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 ++W L G L++ +T + + VV+V+D S+P A+ E++ S R + Sbjct: 66 YTRLNVWILDGDPRNKSLLKYALTPKHARDVLVVMVVDCSRPWAIMESLHSWTEILREHI 125 Query: 147 --------------EKVCAALQKTGESRSGKQRVPRVLHKDYPDREL--------ISPFP 184 EK+ Q ++ R D+ + + Sbjct: 126 HSLKLSPKELNEMEEKIVQQFQDYTDTEEASDENRRRSGTKDEDKVVLPLEENVLVDNLG 185 Query: 185 VPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 +P++++ +K D +DF E I + +R +GA+L +TS K + Sbjct: 186 IPMIVLVTKTDCMLSLEKDRDFHDEHFDFIQQHIRRYCLKHGAALFYTSVKENKNCNLFL 245 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDL-WK 297 ++ +G + IP+G DS+ +IG + +H + FD Sbjct: 246 KYVLHKIYGLPFKSPALVVDKDSVFIPSGWDSMKKIG---ILNEHLKNIHPDDSFDDHII 302 Query: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKD 337 K + E ++ Q + QK+ Sbjct: 303 KPALRKPLQEKEIT-------AEEEQAFLAKQQQL-LQKN 334 >gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00000012631 [Nasonia vitripennis] Length = 357 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 101/347 (29%), Positives = 181/347 (52%), Gaps = 18/347 (5%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 T D A + D + D ++++ +GS+ GKTT++ RFLE+++T K Sbjct: 6 TNQDNARELALQASIQEDT--QRKTDPEESHEKSLIILGSREVGKTTMIYRFLEKEDTPK 63 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGG--GISLSDLVQIPITADNVSFLSVVLVLDL 125 PTLA++Y++GR+A G + KD+ H+WE+G +S ++ + + +V+++LDL Sbjct: 64 PTLAMDYSYGRKA-GKSLVKDVVHVWEVGHLAPSLISGSMRGCTLSHSAHHTTVLIMLDL 122 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRE--LISPF 183 KP+ LW ++E L + R + + + + R K R R K + E + PF Sbjct: 123 GKPDVLWNSLEECLVAVRAAM-MMSYQQELVHDLRERKIRYLRERAKPGTEDEPPVDDPF 181 Query: 184 PVPLLIVGSKFDIFQDFDS-EKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 P+ L ++G K+D F++ S + ++ I + LR AH GA L + S+K + +++ ++ Sbjct: 182 PMRLCLIGGKYDEFRELHSGDDKESIGQALRAAAHVLGAGLHYHSAKDSHLLRRTKELLS 241 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 F + K+ TD KPL++ AGSDS S I ++ T D K+++ + Sbjct: 242 HYGFKGQSTKASVTDYDKPLSVAAGSDSFSAIDLKISRNDYAVT------LDEIKQIYVR 295 Query: 303 VFPHESTRER---KELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 FP + ++ DP DP F+EP++D +R Q++QE+ R+ Sbjct: 296 RFPQVPKNQDVLPGDMDDPANDPNFNEPIVDRLRLQREQEISVLLRD 342 >gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938-PA, isoform A [Apis mellifera] Length = 470 Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 124/369 (33%), Gaps = 64/369 (17%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 + D LW AEV PS + + +G GKTT++ + + Sbjct: 23 PENKDNLWSSILAEV-----------QNSSSNKLPSNKNILVLGDNESGKTTLIAKL-QG 70 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LE+ + + + +W L G ++L++ + A+ V+LV Sbjct: 71 VEDPKKGSGLEFAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLRFALNAERFPHTLVMLV 130 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------- 175 ++ P A+ + ++S + ++K+ R + + + Sbjct: 131 AAMTTPWAILDQLQSWAALLGDHIDKLPLDNDTWQRCRQLNVKKWQDYTEPGDELDPGSP 190 Query: 176 --------DRELISPFPVP-----------LLIVGSKFDIF------QDFDSEKRKVICK 210 D + + P+P +++V +K D D+ E I + Sbjct: 191 LRRTSRNLDDDTMDNLPLPEGVLTTNLGLDVVVVITKTDYMSTLEKEHDYKDEHFDFIQQ 250 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA L +TS+K + ++ + + IPAG D+ Sbjct: 251 WIRRFCLQYGAGLFYTSAKEDKNCDLLYKYLTHRIYSLPFRTPALVVEKDAVLIPAGWDN 310 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFE----------------KVFPHESTRERK 313 + +I ++ ++ + + D+ + + F + Sbjct: 311 MKKIS---ILHENLQSMKPDDYYRDVIAQPSINRKCVAREVEVQAEEEQAFLAKQQAALL 367 Query: 314 ELKDPVKDP 322 +KDP + P Sbjct: 368 GVKDPTRSP 376 >gi|157128066|ref|XP_001661298.1| dynein light intermediate chain [Aedes aegypti] gi|108872707|gb|EAT36932.1| dynein light intermediate chain [Aedes aegypti] Length = 494 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 59/359 (16%), Positives = 119/359 (33%), Gaps = 54/359 (15%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD 63 + LW +EV + PS ++V +G A GKTT++ + + Sbjct: 26 DPKENLWSAILSEV-----------QTQSSTKLPSNKSVLVLGDNASGKTTLIAKL-QGV 73 Query: 64 ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVL 123 E K LEY + + +W L G ++L++ + N + V+L L Sbjct: 74 EDPKKGSGLEYAYIDVRDEYRDDVTRLGVWILDGDPGHTNLLKYALNETNYAHTLVILTL 133 Query: 124 DLSKPNALWETMESLLGSARNQVEKVCAALQK--------------------TGESRSGK 163 ++ P + + +E + + + + ++ + S Sbjct: 134 SMTTPWSWVDQLEHWIKMLDDHIAGLKIDPEERQQCRQRLVTVWQSYCDTIDELDPGSPI 193 Query: 164 QRVPRVLHKDYPDRELISPFPVPLLIVG-------SKFDIFQ------DFDSEKRKVICK 210 +R R+ D L P V +G +K D D+ E + + Sbjct: 194 KRTNRLSSVDDDLDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQ 253 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGASL +TS K + ++ +G + IPAG D+ Sbjct: 254 WIRRFCLVYGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRTPALIVEKDAVLIPAGWDN 313 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I ++ + + + D+ + + E + ++ Q Sbjct: 314 MKKIN---ILYENMQSCKPDDYYNDIIAQPPSRKTVSNREIEVQ-----TEEEQAFLSR 364 >gi|146097038|ref|XP_001468017.1| dynein light intermediate chain [Leishmania infantum JPCM5] gi|134072383|emb|CAM71091.1| dynein light intermediate chain, putative [Leishmania infantum] Length = 424 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 172/370 (46%), Gaps = 38/370 (10%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD 63 + D D+ +R + E + ++ +G+ GKTT+L R Sbjct: 65 IVIDPTKDLWQNI--TRNIKDANVEQT--------ETSLVMVGASGSGKTTLLHRIYTSF 114 Query: 64 E---------TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNV 114 + K T AL+Y+F RR+ +AH WE+ G S L+ I +T +NV Sbjct: 115 QSSSSGSGPKRVKATTALDYSFARRS--ERNVAPVAHFWEIAQGTQFSQLLDIVLTPENV 172 Query: 115 SFLSVVLVLDLSKPN--ALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRVPRVL 170 ++ +V+D S+ WET L +V + ++ G + K R + + Sbjct: 173 HAVAAAVVVDASEEGLPVSWETATYWLRRLDQRVSDISQRMKAKGSTTPAKILTRAQKAI 232 Query: 171 HKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKS 230 D+PD + + +P ++V +K D F+ D ++ K++C+++R+LAH YGA ++FTS + Sbjct: 233 GLDHPDLKRMRLSGIPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQE 291 Query: 231 ETTMSKSRSFINQLAFGTER-PKSISTDPSK-PLAIPAGSDSLSQIGPPVATEVDIGTLH 288 + R+ +N F PK + TDP + + + DS IG P + + Sbjct: 292 SV---RWRALMNFTLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGDPDVSRLGGSVST 348 Query: 289 AKNPFDLWKKVFEKVFPHESTRERKELKDP-------VKDPQFSEPLIDSIRAQKDQELD 341 D WK F++ FP + E K + DP + F +P+ID++R QKD+EL+ Sbjct: 349 GDAELDRWKAPFDEAFPPKKLNEDKVMDDPFIRRLYDTAEGGFGDPVIDALRKQKDEELE 408 Query: 342 QYKREQAKSW 351 QY+++ + + Sbjct: 409 QYRKKSSNAA 418 >gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, isoform A [Tribolium castaneum] Length = 475 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 62/375 (16%), Positives = 127/375 (33%), Gaps = 64/375 (17%) Query: 1 MPK-------VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKT 53 MP+ S LW ++V++ + PS + V +G GKT Sbjct: 1 MPEEVAKPTDDSKKNLWSQILSDVQNNGN-----------PKLPSCKQVLVLGDNECGKT 49 Query: 54 TILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADN 113 TI+ + + E K LEY + + + +W L G +DL++ + + Sbjct: 50 TIVAKL-QGVEDPKKGSGLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHTDLLKFALNEET 108 Query: 114 VSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVC--------------------AAL 153 V+L + ++ P ++ E ++ + ++K+ Sbjct: 109 FQHTLVILTVTMTAPWSILEQLQHWASVLADHLDKLKLDVDLRQNRRQHIVKMWQEYVEP 168 Query: 154 QKTGESRSGKQRVPRVL---------HKDYPDRELISPFPVPLLIVGSKFDIF------Q 198 + S +R R P+ L + + +++V +K D Sbjct: 169 GDELDPASPMKRSSRNFGDGEDGLEEQTSLPEGTLTNNLGLDIVVVVTKTDYIQTLEKEH 228 Query: 199 DFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 D+ E + + +R YGA+L +TS+K + ++ +G Sbjct: 229 DYRDEHLDFMQQWIRKFCLQYGAALFYTSAKEDKNCDLLYKYLTHRIYGFPFRTPALVVE 288 Query: 259 SKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKD 317 + IPAG D++++I ++ T + F D+ + + + T Sbjct: 289 KDAVFIPAGWDNMNKI---RILYENLHTCKPDDYFRDIIVQPATRKTINRETELL----- 340 Query: 318 PVKDPQFSEPLIDSI 332 +D Q I Sbjct: 341 -AEDEQAFLARQQQI 354 >gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 233 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 111/183 (60%), Positives = 140/183 (76%), Gaps = 1/183 (0%) Query: 175 PDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTM 234 DRELI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FTS KSE + Sbjct: 51 KDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTS-KSEALL 109 Query: 235 SKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFD 294 K R INQLAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P + Sbjct: 110 LKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPME 169 Query: 295 LWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSL 354 LWKKV++K+FP +ST K ++DP +DPQ++E +D +R QKDQEL+ YKR +K+WK + Sbjct: 170 LWKKVYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWKQI 229 Query: 355 ALD 357 LD Sbjct: 230 ELD 232 >gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00000001598 [Nasonia vitripennis] Length = 486 Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 125/362 (34%), Gaps = 57/362 (15%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 D LW A+V + PS + V +G GKTT++ + + E Sbjct: 28 DNLWSSILAQV-----------QNSSNNKLPSNKNVLVLGDNESGKTTLIAKL-QGVEDP 75 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + + + +W L G ++L++ + A V+LV ++ Sbjct: 76 KKGSGLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLKFALNAKRFPNTLVMLVAAMT 135 Query: 127 KPNALWETMESLLGSARNQVEKVCAAL----QKTGESRSGKQRVPRVLHKDYPDR----- 177 P AL + ++ + ++K+ + Q + R ++ + + D Sbjct: 136 TPWALLDQLQFWSRVLGDHIDKLASDNDDFKQTWQDCRQQIKKKWQDYTEPGDDLDPGSP 195 Query: 178 ----------ELISPFPVP-----------LLIVGSKFDIF------QDFDSEKRKVICK 210 E + P+P +++V +K D D+ E + + Sbjct: 196 LRRTSRNLDDESVDNLPLPDGVLTTNLGLDIVVVITKTDYMSTLEKEHDYRDEHFDFMQQ 255 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA L +TS K + ++ + + IPAG D+ Sbjct: 256 WIRRFCLQYGAGLFYTSVKEDKNCDLLYKYLTHRIYSLPFRTPALVVEKDAVLIPAGWDN 315 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 + +I ++ ++ + + D+ K P +++++ +D Q Sbjct: 316 MKKIS---ILHENLQSMKPDDYYRDVIVKP-----PSNRKSVQRQVEVQTEDEQAFLTRQ 367 Query: 330 DS 331 Sbjct: 368 QE 369 >gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974436|ref|XP_001184479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 483 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 59/351 (16%), Positives = 117/351 (33%), Gaps = 54/351 (15%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD 63 LW E + + PS +++ +G GKTT+L R + Sbjct: 21 DEPQNLWTSIL-----------SEVSSHSSSKLPSCKSILVLGEDETGKTTLLSRL-QGV 68 Query: 64 ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVL 123 E K LEY + +W L G DL++ +TADN+ + V++ + Sbjct: 69 EDPKKGYGLEYLYLDVRDEDRDDTTRCGVWILAGENEHEDLLRYALTADNLEHMLVIIAV 128 Query: 124 DLSKPNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRV--- 166 D+ +P + ++++ R V+ + Q E +G+ Sbjct: 129 DMCRPWNIMDSLQKWTQVIRRHVDSLRIPPEKLRELEQRLVQQFQAYTEPETGQDSSVTR 188 Query: 167 -------------PRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKV 207 + + L VP+++V +K D QD+ E Sbjct: 189 RTSGVTKPTGAEDEEAVVLPLGETTLTHNLGVPIVVVVTKSDYVNTLEKEQDYSDEHLDF 248 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + + +R YGA+L + S K ++ + + L +P+G Sbjct: 249 LQQNVRKFCLNYGAALFYVSVKENKNCDLLNRYLLHRLYDFPFNSAALVVEKDALFVPSG 308 Query: 268 SDSLSQIGPPVATEVDIGTLHAKNPFDL-WKKVFEKVFPHESTRERKELKD 317 D+L ++ ++ + + P+D K + + +D Sbjct: 309 WDNLQKVS---ILYENMANIDPEKPYDEVIIKPVVRRLLQ--DNKEIIAED 354 >gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_a [Rattus norvegicus] Length = 455 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 108/348 (31%), Gaps = 85/348 (24%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR + IPAG D Sbjct: 256 AHLRGFCL-------------------------------------QFVEKDAVFIPAGWD 278 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 279 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 323 >gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermediate chain [Tetrahymena thermophila] Length = 474 Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 100/345 (28%), Positives = 170/345 (49%), Gaps = 22/345 (6%) Query: 15 AEVRSRESRTDEEEAEEEDAHF------PSQRTVFFMGSKAGGKTT---ILLRFLERDET 65 EV + + + E++ ++T+ +G K GKTT IL + D+ Sbjct: 13 NEVNKGDRSNIDLWSHAEESELKQGFAKNLEKTLVVIGDKGSGKTTFVNILKNMQQVDDR 72 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 PT+ L+Y + RR + K++ H +ELGGG S ++ IPI+ N +LVLDL Sbjct: 73 YIPTVGLDYQYVRRTNANR--KELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLDL 130 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQ---KTGESRSGKQRVPRVLHKDYPDRELISP 182 SKP+ + E+ R Q+++ + + RS + + + +PD+ + Sbjct: 131 SKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQARFESHPDKNRVKI 190 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 P+ +++G K+D+F+ DSE RK + +TLR+LAH GASL F SSK+ RS +N Sbjct: 191 LPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSKNNDLFQNVRSIMN 250 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 FG + ++ +P+ I D L+++G P + + +KKV ++ Sbjct: 251 NALFGKTLAQYYQSEHLRPIEISLSKDELAKMGLPQISGNM-------TYLEAFKKVIQE 303 Query: 303 VFPHESTRERKELKDPVK-DPQFSEPLIDSIRAQKDQELDQYKRE 346 FP + +DP++ +F E IDSIRA+KD+E+ +E Sbjct: 304 TFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKE 348 >gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_b [Mus musculus] Length = 458 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 58/348 (16%), Positives = 110/348 (31%), Gaps = 82/348 (23%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAA--------------LQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR I + + IPAG D Sbjct: 256 AHLRRFCLQ---------------------CILGML-------------KDAVFIPAGWD 281 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 282 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 326 >gi|157874331|ref|XP_001685649.1| dynein light intermediate chain, putative [Leishmania major] gi|68128721|emb|CAJ08854.1| dynein light intermediate chain, putative [Leishmania major] Length = 425 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 98/364 (26%), Positives = 167/364 (45%), Gaps = 39/364 (10%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD 63 + D D+ +R + E + ++ +G+ GKTT+L R Sbjct: 65 IVIDPTKDLWQNI--TRNVKDANVEQT--------ETSLVVVGASGSGKTTLLHRIYTSF 114 Query: 64 ET---------AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNV 114 ++ K T AL+Y+F RR+ +AH WE+ G S L+ I +T +NV Sbjct: 115 QSNSSGSGPKRVKATTALDYSFARRS--ERNVAPVAHFWEIAQGTQFSQLLDIVVTPENV 172 Query: 115 SFLSVVLVLDLSKPN--ALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRVPRVL 170 + +V+D S+ WET L +V + ++ G + K R + + Sbjct: 173 HAVVAAVVVDASEEGLPVAWETATYWLRRLDQRVSDISQRMKAKGSTTPAKILTRAQKAI 232 Query: 171 HKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKS 230 D+PD + + VP ++V +K D F+ D ++ K +C+++R+LAH YGA ++FTS + Sbjct: 233 GLDHPDLKRMRLSGVPTVLVINKIDAFRR-DMQQLKFLCRSMRYLAHLYGAHVVFTSEQE 291 Query: 231 ETTMSKSRSFINQLAFGTER-PKSISTDPSK-PLAIPAGSDSLSQIGPPVATEVDIGTLH 288 + R+ +N F PK + TDP + + + DS IG P + + Sbjct: 292 SV---RWRALMNFTLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGDPDVSRLGGSAST 348 Query: 289 AKNPFDLWKKVFEKVFPHESTRER-KELKDP-------VKDPQFSEPLIDSIRAQKDQEL 340 D WK F++ FP + E K + DP + F +P+ID++R QKD+EL Sbjct: 349 GDAELDRWKAPFDEAFPPKKLNEEGKVVDDPFIRRLYDTSEGGFGDPVIDALRKQKDEEL 408 Query: 341 DQYK 344 +QY+ Sbjct: 409 EQYR 412 >gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae str. PEST] gi|157018577|gb|EAA06916.4| AGAP000723-PA [Anopheles gambiae str. PEST] Length = 470 Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 114/336 (33%), Gaps = 43/336 (12%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E + + PS ++V +G A GKTT++ + + E K LEY + + Sbjct: 6 EVQTQSNTKLPSNKSVLVLGDNASGKTTLIAKL-QGVEDPKKGSGLEYAYIDVRDEYRDD 64 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 +W L G ++L++ + N V+L L ++ P + + ++ + + + Sbjct: 65 VTRLSVWILDGDPGHNNLLKFALNEQNFPHTLVILTLSMTTPWSWVDQLQHWMKILDDHI 124 Query: 147 EKVCAALQKT--------------------GESRSGKQRVPRVLHKDYPDRELISPFPVP 186 + ++ + S +R R+ D L P V Sbjct: 125 AGLKIDPEEKQQCQARLTTEWQNYCETIDDLDPGSPIKRTNRLPSVDDELDALPLPEGVL 184 Query: 187 LLIVG-------SKFDIFQ------DFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 +G +K D D+ E + + +R YGASL +TS K + Sbjct: 185 TTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQWIRRFCLMYGASLFYTSVKEDKN 244 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 ++ +G + IPAG D++ +I ++ + + + Sbjct: 245 CDLLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDNMKKIS---ILYENMQSCKPDDYY 301 Query: 294 -DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 D+ + + E + +D Q Sbjct: 302 NDIIAQPPSRKTVSNRESEIQ-----TEDEQSFLAR 332 >gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 light intermediate chain [Apis mellifera] Length = 345 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 185/343 (53%), Gaps = 25/343 (7%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 + S + + DIA EE+ + + + +R++ +GSK GKTTI+ RFLE+ Sbjct: 4 QNSEENVRDIALRFCLE------EEQRRKTNPNETHERSIIIVGSKRVGKTTIVHRFLEK 57 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNV----SFLS 118 DE KPT+A++Y+FGR+A G + K+I H+WE+G S LV +T ++ ++ Sbjct: 58 DEAPKPTIAMDYSFGRKA-GKSLIKNIVHVWEVGHLT--SSLVSAAMTGSSLTHSPHHVT 114 Query: 119 VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRE 178 ++++LDLS+P LW T E L RN + + KQR+ + Sbjct: 115 ILVILDLSQPEILWTTFEEALSVVRNAM---KMSYDDKIIQELKKQRIKERKKIVEKE-- 169 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 I PFP+ L +G K+D F+D D +K++++ KTLR +AH GASL + S+K ++ + + + Sbjct: 170 -IDPFPMRLCFIGGKYDQFKDLDLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIK 228 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 ++ FGT+ TD KPLAI AG+DS S I ++ D K+ Sbjct: 229 DLLSYYGFGTQFSDIKCTDFEKPLAISAGTDSFSSI------DLQFPQTRPSAMLDTIKQ 282 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELD 341 ++ P ES L+DP DP F+EP+ID +R Q+++E++ Sbjct: 283 IYVTHIPQESRSNEIILEDPSNDPNFNEPIIDRLRTQREEEIN 325 >gi|154343515|ref|XP_001567703.1| dynein light intermediate chain, putative [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065035|emb|CAM43147.1| dynein light intermediate chain, putative [Leishmania braziliensis] Length = 428 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 98/375 (26%), Positives = 174/375 (46%), Gaps = 42/375 (11%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 ++ D D+ +R + E + + +G+ GKTT+L R Sbjct: 64 QIVIDPTKDLWQNI--TRNVKDAAVEQT--------EINLVVVGAPGSGKTTLLHRIYTS 113 Query: 63 DETA---------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADN 113 +++ K T AL+Y+F RR+ +AH WE+ G+ S L+ + +T +N Sbjct: 114 FQSSASGSCSKRVKATTALDYSFARRS--ERNVAPVAHFWEIAQGMQFSQLLDVVVTPEN 171 Query: 114 VSFLSVVLVLDLSKPN--ALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRVPRV 169 V + +V+D S+ WE + +V + ++ G + K R + Sbjct: 172 VHAIVAAVVVDASEEGLPVAWEAATYWMRRIDQRVSDISQRMKAKGSTTPEKLLTRAQKA 231 Query: 170 LHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSK 229 + ++PD + + VP ++V +K D F+ D ++ K++C+++R+LAH YGA ++FTS + Sbjct: 232 VGLEHPDLKRMRLSGVPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQ 290 Query: 230 SETTMSKSRSFINQLAFGTER-PKSISTDPSK-PLAIPAGSDSLSQIGPPVATEVDIGTL 287 + R+ +N F PK + TDP + + + A DS IG P + + G Sbjct: 291 ESV---RWRALMNFTLFQAPFDPKHLQTDPERGAVLLTADRDSFLDIGDPNMSRLGGGGS 347 Query: 288 HA---KNPFDLWKKVFEKVFPHESTRE-RKELKDP-------VKDPQFSEPLIDSIRAQK 336 A D WK F+ FP + E K + DP + F EP+ID++R QK Sbjct: 348 SASTGDAELDRWKVPFDDAFPPKKLNEEDKVMDDPFIRRLYDTSEGGFGEPMIDTLRKQK 407 Query: 337 DQELDQYKREQAKSW 351 D+EL+QY++ + + Sbjct: 408 DEELEQYRKNSSNAA 422 >gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] gi|89300006|gb|EAR97994.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] Length = 487 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 99/358 (27%), Positives = 170/358 (47%), Gaps = 35/358 (9%) Query: 15 AEVRSRESRTDEEEAEEEDAHF------PSQRTVFFMGSKAGGKTT---ILLRFLERDET 65 EV + + + E++ ++T+ +G K GKTT IL + D+ Sbjct: 13 NEVNKGDRSNIDLWSHAEESELKQGFAKNLEKTLVVIGDKGSGKTTFVNILKNMQQVDDR 72 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 PT+ L+Y + RR + K++ H +ELGGG S ++ IPI+ N +LVLDL Sbjct: 73 YIPTVGLDYQYVRRTNANR--KELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLDL 130 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQ---KTGESRSGKQRVPRVLHKDYPDRELISP 182 SKP+ + E+ R Q+++ + + RS + + + +PD+ + Sbjct: 131 SKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQARFESHPDKNRVKI 190 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSS-------------K 229 P+ +++G K+D+F+ DSE RK + +TLR+LAH GASL F SS + Sbjct: 191 LPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSNTQIHVLFNQHNKR 250 Query: 230 SETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHA 289 + RS +N FG + ++ +P+ I D L+++G P + Sbjct: 251 NNDLFQNVRSIMNNALFGKTLAQYYQSEHLRPIEISLSKDELAKMGLPQISGNM------ 304 Query: 290 KNPFDLWKKVFEKVFPHESTRERKELKDPVK-DPQFSEPLIDSIRAQKDQELDQYKRE 346 + +KKV ++ FP + +DP++ +F E IDSIRA+KD+E+ +E Sbjct: 305 -TYLEAFKKVIQETFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKE 361 >gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] gi|31376209|gb|AAO12154.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|33334344|gb|AAQ12259.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|47680185|gb|AAT37069.1| dynein 1b light intermediate chain [Chlamydomonas reinhardtii] gi|158276532|gb|EDP02304.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] Length = 427 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 97/371 (26%), Positives = 173/371 (46%), Gaps = 36/371 (9%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 +P + T I A + EE ++ A +F+GS+A GK+T+L RFL Sbjct: 7 LPGQAVKTPGSIWAKAIEH-----ANEERKKPGADGRGDAFCYFVGSRAAGKSTLLNRFL 61 Query: 61 --ERDETAKPTLALEYTFGRR-ARGHNTPKDIAHLWELGGGISLSDLV----QIPITADN 113 R E KP+ +EYT+ R+ A + KD+AH+WE+GG ++ + Q+ +TA Sbjct: 62 YPTRAEVPKPSEGIEYTYARKPAAFDHEKKDLAHIWEVGGSQEFAEEIVNSDQLFLTAKQ 121 Query: 114 VSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES--RSGKQRVPRVLH 171 V+ VV+V+DLS P + T+ + + ++ +K G +QR L+ Sbjct: 122 VTTAVVVIVVDLSDPAGVLPTLLYWVEQVKKKLGSTYEKFEKKGLQLPEQLRQRAKSKLY 181 Query: 172 KDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTS---- 227 D++ + + L+I +K+D F++ D E +KV+ + LR++AH +GA L + S Sbjct: 182 SANEDKDTVYHSGISLVIAATKYDAFKNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLHG 241 Query: 228 ------SKSETTMSKSRSFINQLAFGTERPKSI-----STDPSKPLAIPAGSDSLSQIGP 276 ++ + +N L F K + D + P+ +PAG D+ +G Sbjct: 242 ASEGSGAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSVGR 301 Query: 277 PVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVK---DPQFSEPLIDSIR 333 P + W+++FEK+FP +E K K Q+ E +D++R Sbjct: 302 PRSQGEG----TVAGGLAEWRELFEKMFPGVREKEAKMSAKGAKFVIPEQYKEEEVDAVR 357 Query: 334 AQKDQELDQYK 344 +K +L+ ++ Sbjct: 358 QRKVTDLENFR 368 >gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosophila melanogaster] gi|22832093|gb|AAN09291.1| CG1938-PB, isoform B [Drosophila melanogaster] Length = 398 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 96/284 (33%), Gaps = 41/284 (14%) Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W L G ++L+ + N + V+L + +++P E + + ++ Sbjct: 2 TRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQPWGWLEQLNHWIKVLGQHID 61 Query: 148 KVCAALQKT--------------------GESRSGKQRVPRVLHKDYPDR------ELIS 181 + ++ + S +R R D D LI+ Sbjct: 62 SLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLLPLTEDALIT 121 Query: 182 PFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMS 235 + +++V +K D ++ E I + +R +G SL +TS K + Sbjct: 122 NLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLRHGTSLFYTSVKEDKNCD 181 Query: 236 KSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-D 294 ++ +G + IPAG DSL +I ++ + A+NP+ D Sbjct: 182 VLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLKKIS---ILYENMHGVKAENPYTD 238 Query: 295 LWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQ 338 + K + E + +D Q I Q DQ Sbjct: 239 IIKSPPTRKAVSNREAEVQ-----TEDEQAFLARQQEILKQGDQ 277 >gi|119584836|gb|EAW64432.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_b [Homo sapiens] Length = 224 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 80/217 (36%), Gaps = 36/217 (16%) Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------------------S 161 +LV+D+SKP ++++ R V+K+ ++ + + Sbjct: 1 MLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPA 60 Query: 162 GKQRVPRVLHKDYPDR--------ELISPFPVPLLIVGSKFDIF------QDFDSEKRKV 207 QR +D D L +P+L+V +K D D+ E Sbjct: 61 SPQRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDF 120 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 I +R YGA+LI+TS K + +I Q +G + IPAG Sbjct: 121 IQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAG 180 Query: 268 SDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKV 303 D+ +IG + TL A++ F D+ K + Sbjct: 181 WDNDKKIG---ILHENFQTLKAEDNFEDIITKPPVRK 214 >gi|158602493|gb|EDP38908.1| dynein light intermediate chain, putative [Brugia malayi] Length = 469 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 58/325 (17%), Positives = 113/325 (34%), Gaps = 60/325 (18%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 + +W +EV + + T+ F+G++ GK+ +L R E+ E Sbjct: 25 DDERIWTQILSEVSANGMSNS------------APGTILFLGNRQSGKSWLLNRL-EKRE 71 Query: 65 TAKPTLALEYTFGRRARGHNTPKD-----------------IAHLWELGGGISLSDLVQI 107 T+ ALEY F + +W L G ++ + LV+ Sbjct: 72 TSGRGSALEYHFLNVHTDYRDVSYAYQLASAGAGVAPGESVTLPVWVLDGDVAFAPLVKF 131 Query: 108 PITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAA-------------LQ 154 +TA +S V+L + +P A+ ++ + +Q+E + Q Sbjct: 132 ALTAP-LSKSIVILCASMQEPGAVLPSLNKWVKVISDQIENIFDKATVIDARKSQELFWQ 190 Query: 155 KTGE-------------SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQD-F 200 + E + R V+ L L++V +K D+ + Sbjct: 191 EYVEPLDSSMQSDKIPSMETEHVRSHFVVLLPLEQNILTRNTGAALVVVLTKSDLAHNEM 250 Query: 201 DSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSK 260 E+ + +R +GA+L++TS+K E + ++ G Sbjct: 251 SDEQLDRLQYHVRKFCMAHGAALVYTSAKEEKNTALLYKYVVHRVCGMPFTTPAQVVDKD 310 Query: 261 PLAIPAGSDSLSQ--IGPPVATEVD 283 + +PAG D+ + I +VD Sbjct: 311 SVFVPAGWDNEKKLDIIKEAIPDVD 335 >gi|123423641|ref|XP_001306418.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121887991|gb|EAX93488.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 286 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 74/330 (22%), Positives = 135/330 (40%), Gaps = 50/330 (15%) Query: 15 AEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEY 74 V + E E E + V F+G + GK++++ +F R ++ PTLAL Y Sbjct: 5 NVVNDLWGQIIEHETEPIKPYGAGDSHVLFVGGEQSGKSSLINQFFGRGDSTYPTLALAY 64 Query: 75 TFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWET 134 N + + H WELGGG+ + L+ T D +S V + DLSK ++ E+ Sbjct: 65 QCCNLKV--NGKEKVLHFWELGGGVQMESLIPTIATEDTISGFVVFVCFDLSKSASIIES 122 Query: 135 MESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKF 194 +E L D++ + + G+ + Sbjct: 123 LE-WLDIL----------------------------QMRLKDKQNA------IFLAGTHY 147 Query: 195 DIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI 254 D+F+ + +++I + LR +A + L+FTSSK ET +++ ++ I + + Sbjct: 148 DLFESKSPQDKEIIVQGLRSIAAEHKVGLVFTSSKMETLINRFKNVIKYVCIANSNVREK 207 Query: 255 STDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKE 314 S D P+ + G+D+ Q + D+ K+ ++ + + Sbjct: 208 SVDFFNPVIVGPGADTELQ-------------TSGQEVADMMNKLSAEIAIEKRDKSSNS 254 Query: 315 LKDPVKDPQFSEPLIDSIRAQKDQELDQYK 344 LK+ + DP +E IDS+ K EL+ K Sbjct: 255 LKNVITDPGLAEEDIDSLYLAKKAELNSKK 284 >gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70865007|gb|EAN81375.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 286 Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats. Identities = 69/246 (28%), Positives = 122/246 (49%), Gaps = 28/246 (11%) Query: 1 MPKVSSDTLWDIAAAEV-RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRF 59 MP+V+ D D+ + +RE++ + ++ V +G+ GKT++L R Sbjct: 50 MPQVTVDPTKDLWQNIILNTRENQVTQ-----------TEVNVLIVGTSGSGKTSLLRRI 98 Query: 60 LERDETA-----------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIP 108 T+ KPT AL+Y+F RR H +AH WEL G+ LS L ++ Sbjct: 99 FSGVNTSSSSVPKSFLRVKPTTALDYSFVRRNDRHIA--QVAHFWELAQGMELSQLCEVV 156 Query: 109 ITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRV 166 IT +NV + + +V+D S+P+ +W+T+ + +V ++ ++ G + K R Sbjct: 157 ITPENVHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRA 216 Query: 167 PRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFT 226 R++ ++PD + VP +I+ +K D F + K + +++RF+AH YGA L+FT Sbjct: 217 KRLVGMEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFT 275 Query: 227 SSKSET 232 S Sbjct: 276 SDAEAI 281 >gi|39971217|ref|XP_366999.1| hypothetical protein MGG_03075 [Magnaporthe grisea 70-15] gi|149210811|ref|XP_001522780.1| hypothetical protein MGCH7_ch7g878 [Magnaporthe grisea 70-15] gi|86196833|gb|EAQ71471.1| hypothetical protein MGCH7_ch7g878 [Magnaporthe grisea 70-15] gi|145017071|gb|EDK01434.1| hypothetical protein MGG_03075 [Magnaporthe grisea 70-15] Length = 561 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 114/391 (29%), Gaps = 66/391 (16%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPT--------- 69 ++ E+ P ++ + +G + + L T Sbjct: 24 KKDMWNSMLESVASGKRLP-EKNLLVLGGTVETQRSFLETLSSDFRRTLDTDHIPPVANH 82 Query: 70 LALEYTFGRRARGHNTP-KDIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVLVLDLSK 127 AL T+ L+ L S S L++ +T + VV++LD S Sbjct: 83 FALGNTYYDVLDADQEDILARITLYSLTKPSASFSSLLKPLLTPQTIPNTLVVILLDWSH 142 Query: 128 PNALWETMESLLGSAR-----------NQVEKVCAALQKTGESRSGKQRVPR-------- 168 P + + R + +E+V + G + Sbjct: 143 PWLWMRQLRDWILLLRTVLVSLSIEAKDAMEEVMIGWRDRGRGGASTNLDGSGVATAAMA 202 Query: 169 --------VLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRF 214 + E +PL +V D Q + E+ V+ + +R Sbjct: 203 SDGGAGSDSVALPLGPGEWEDALGLPLSVVCQNADKIDSLEKRQGWKEEQFDVVMQFMRT 262 Query: 215 LAHFYGASLIFTSSK-SETTMSKSRSFI-NQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 + +GASLI+TS+ S S + + K D K + +P DS Sbjct: 263 VLLKHGASLIYTSTSVPSQLPSLIHSSLGITSLLKRQPLKHNVIDRDK-IVVPPNWDSWG 321 Query: 273 QIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQ-FSEPLIDS 331 +I + W ++ FP ES R D + + FS+ D Sbjct: 322 KI---RVLRDGFDVEMVS---EGWSIDLDQPFPRESARTLNG--DGLNEAGEFSDSESDD 373 Query: 332 IRAQKDQE---------LDQYKREQAKSWKS 353 Q + + +Q + + + Sbjct: 374 GARQSEDDQVEGSAVVLYEQKIENPSAAAQQ 404 >gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 446 Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats. Identities = 46/201 (22%), Positives = 74/201 (36%), Gaps = 22/201 (10%) Query: 135 MESLLGSARNQVEKVCAALQKTGESRSG----KQRVPRVLHKDYPDR--------ELISP 182 +E L + ++ V Q+ E QR +D D L Sbjct: 99 LEYLYLNVHDEDRDVIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVLPLGADTLTHN 158 Query: 183 FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSK 236 +P+L+V +K D D+ E I +R YGA+LI+TS K + Sbjct: 159 LGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDL 218 Query: 237 SRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DL 295 +I Q +G + IPAG D+ +IG + TL A++ F D+ Sbjct: 219 VYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG---ILHENFQTLKAEDNFEDI 275 Query: 296 WKKVFEKVFPHESTRERKELK 316 K + F HE ++ + Sbjct: 276 ITKPPVRKFVHEKEIMAEDDQ 296 Score = 86.5 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 47/159 (29%), Gaps = 26/159 (16%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 LW +EV +R + P+ + V +G GKT+++ + ++ E Sbjct: 44 DGQNLWSCILSEVSTRSR-----------SKLPAGKNVLLLGEDGAGKTSLIRK-IQGIE 91 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWE--------------LGGGISLSDLVQIPIT 110 K LEY + + D V +P+ Sbjct: 92 EYKKGRGLEYLYLNVHDEDRDVIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVLPLG 151 Query: 111 ADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKV 149 AD ++ + VL + +E + + Sbjct: 152 ADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFI 190 >gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 134 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 72/134 (53%), Positives = 95/134 (70%), Gaps = 1/134 (0%) Query: 224 IFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVD 283 +FTS KSE + K R INQLAFG ++ KS+ D +KPL I AG DSL QIG P + D Sbjct: 1 MFTS-KSEALLLKMRGVINQLAFGIDKSKSMCVDQNKPLFITAGLDSLCQIGSPPVPDSD 59 Query: 284 IGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQY 343 IG L A +P +LWKKV+EK+FP +ST K ++DP +DPQ++E +D +R QKDQEL+QY Sbjct: 60 IGKLQAHSPMELWKKVYEKLFPPKSTSTLKAIQDPARDPQYAESEVDEMRVQKDQELEQY 119 Query: 344 KREQAKSWKSLALD 357 KR +K+WK + LD Sbjct: 120 KRSSSKTWKQIELD 133 >gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain isoform 2 [Homo sapiens] gi|16740931|gb|AAH16324.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|119620695|gb|EAX00290.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_b [Homo sapiens] Length = 201 Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 103/205 (50%), Positives = 132/205 (64%), Gaps = 13/205 (6%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+P Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPVSC 172 Query: 179 ---LISPFPVPLLIVGSKFDIFQDF 200 L+ VP ++ + + F F Sbjct: 173 CLGLLLESLVPFIVNDNITNNFFRF 197 >gi|121713178|ref|XP_001274200.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] gi|119402353|gb|EAW12774.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] Length = 509 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 52/360 (14%), Positives = 97/360 (26%), Gaps = 56/360 (15%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFFMGSKA-------------GGKTTILLRFLERDET 65 + + ++ P ++ + +G +T++ + Sbjct: 15 KKNIWSSMLDSVANGKRLP-EKNLLILGGTQDTQREFLETLSADTSDSTLIGEKRKGRVP 73 Query: 66 AKP-TLALEYTFGRRARGHNTPK-DIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVLV 122 AL YT+ + L S + L++ +T +V VV++ Sbjct: 74 PIANQFALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTPQSVPETLVVIL 133 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDY-------- 174 LD S P + + R V K + R D Sbjct: 134 LDWSDPWTWIRRLREWVRLLR-HVLFSLDDETKIVMEEIMTEWRDRKRGMDSGSAGAQGL 192 Query: 175 -----------PDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 E +P+ +V D + E+ I + LR + Sbjct: 193 TSSGGPVTIPLGPGEWDEGLGIPVCVVCQGADKIEKLEKDHGWREEEFDFILQFLRTILL 252 Query: 218 FYGASLIFTSSKSETTMSKSR--SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 +GASLI+T+ ++ S + K D K + +P DS +I Sbjct: 253 KHGASLIYTTPFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPPNWDSWGKIR 311 Query: 276 PPVATEVDIGTLHAKNPFDLWKKVFEKVF------PHESTRERKELKDPVKDPQFSEPLI 329 G A + + E + P + +D E I Sbjct: 312 IIREGFDMEGVSTAWSI--EIQDPPEPLPGSVHYEPQDEGATAA--EDGTSAVTIFEQTI 367 >gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] Length = 201 Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats. Identities = 103/205 (50%), Positives = 133/205 (64%), Gaps = 13/205 (6%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE +KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPSKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+P Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPVSC 172 Query: 179 ---LISPFPVPLLIVGSKFDIFQDF 200 L+ VP ++ + + F F Sbjct: 173 CLGLLLESLVPFIVNDNITNNFFRF 197 >gi|123415018|ref|XP_001304608.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121886072|gb|EAX91678.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 287 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 69/343 (20%), Positives = 128/343 (37%), Gaps = 68/343 (19%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 D DI A + + A + ++ F+GS+ GK+ + +F R + Sbjct: 3 VDPKRDIWGALINEK--------ASSLKSGVNEEKHFLFVGSEKSGKSCLQNQFFSRRDE 54 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 TLAL Y + + + H WE+G G L L+ +T + + + + ++ Sbjct: 55 PPETLALSYQSASV--RQDDKEVVLHFWEIGSGTKLDQLINTIVTKETLKDFNAFICFNV 112 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPV 185 +KP+++ ++ E + + +S Sbjct: 113 NKPSSILTAIDW--------AENLISKFAYKSQS-------------------------- 138 Query: 186 PLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLA 245 + +G+ +D F+ D ++ + LR +A Y A LIFTS K + ++ + I QLA Sbjct: 139 -IYFIGTFYDTFESNDPSQKINTVQGLRAIASKYHAGLIFTSYKDDNLANRFKGLIRQLA 197 Query: 246 FGTERPKSISTDPSKPLAIPAGSDSL---SQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 G I T P+ I SD ++I P ++ K Sbjct: 198 LGETPTGEIITQHISPVFILPDSDKECGGNEIISPYVRQL-------------------K 238 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKR 345 P + + DP +F+E ID + K++EL++ R Sbjct: 239 SAPPDDDAQAASKDDPTSS-KFAEKEIDELAETKERELEEKLR 280 >gi|116194005|ref|XP_001222815.1| hypothetical protein CHGG_06720 [Chaetomium globosum CBS 148.51] gi|88182633|gb|EAQ90101.1| hypothetical protein CHGG_06720 [Chaetomium globosum CBS 148.51] Length = 539 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 107/344 (31%), Gaps = 49/344 (14%) Query: 16 EVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTI--------LLRFLERDETAK 67 + +E + P ++ + +G + L R L+R+ + Sbjct: 27 KAEKKELWNSMLSSVASGRRLP-EKNIILLGGTVDSQREFFETLANNDLRRTLDRNASRM 85 Query: 68 P----TLALEYTFGRRARGHNTPK-DIAHLWELGGGIS-LSDLVQIPITADNVSFLSVVL 121 P + AL YT+ L+ L + + L++ +T ++ +V+ Sbjct: 86 PPVANSFALGYTYYDVLDADQEDTLARISLYTLTSPSAAFASLLRPLLTPQSIPNTLIVV 145 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKT------------------GESRSGK 163 +LD S+P + + R + + ++T + + Sbjct: 146 LLDWSEPWKWMRQLREWILLLRTVLVSLSDECEETMKEVMLAWRDRGRGGVTNLDGTAAV 205 Query: 164 QRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 + E +PL +V + Q + E+ V+ + LR Sbjct: 206 PTADGEMDLPVGPGEWTDELGLPLCVVCQNAEKMEYLEKTQSWKEEEFDVVLQFLRTTLL 265 Query: 218 FYGASLIFTSSKSETTMSKSR--SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 +GASLI+T+ + + S + K D K + IP DS +I Sbjct: 266 RHGASLIYTTPSVPSQLPTLIHSSLGIHSLLKKQPLKHNVIDRDK-VVIPPNWDSWGKI- 323 Query: 276 PPVATEVDIGTLHAKNPFDLWKKVFEKVFP-HESTRERKELKDP 318 N W ++ FP +S ++D Sbjct: 324 --RVLRDGFDVDLVSNG---WSIDLDQPFPRPQSNGSENGIEDG 362 >gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150 [Aspergillus niger] gi|134076075|emb|CAK39434.1| unnamed protein product [Aspergillus niger] Length = 523 Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats. Identities = 56/377 (14%), Positives = 108/377 (28%), Gaps = 58/377 (15%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK----------- 67 + + ++ P ++ + +G + L Sbjct: 27 KKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFLDTLAADSSDPSLSNDKRKGRVP 85 Query: 68 ---PTLALEYTFGRRARGHNTPK-DIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVLV 122 AL YT+ + + L S + L++ +T ++ VV++ Sbjct: 86 PVANQFALGYTYQDVLDADHEDTLARVSAYLLSEPSLSFAPLLKPLLTPQSIPETLVVIL 145 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------- 175 LD S P + + R V K + + R D Sbjct: 146 LDWSDPWTWIRRLREWVRLLR-HVLISLDDETKIVMEENLTEWRDRKRGMDSSSGGAQGF 204 Query: 176 ------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 E +P+ +V D + E+ I + +R L Sbjct: 205 TSSAGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEQFDFILQFMRTLLL 264 Query: 218 FYGASLIFTSSKSETTMSKSR--SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 +GASLI+T+ ++ S + K D K + +P+ DS +I Sbjct: 265 KHGASLIYTTPFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPSNWDSWGKIR 323 Query: 276 PPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLID--SIR 333 G A + + E + + D D Q + + D S Sbjct: 324 IIREGFDMEGISTAWSI--EIQDPPEPLT--------NGVDDRSSDEQTANAVDDGTSAV 373 Query: 334 AQKDQELDQYKREQAKS 350 A +Q + KR+ + + Sbjct: 374 AIFEQTIQDPKRDTSMA 390 >gi|157863075|gb|ABV90642.1| cytoplasmic dynein light intermediate chain [Tetrahymena thermophila] Length = 457 Score = 166 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 54/322 (16%), Positives = 118/322 (36%), Gaps = 66/322 (20%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW+ E + + + V +G++ GK T++ E Sbjct: 5 EPSKKENLWNNILNETGQK--------------NKFQNKQVLVLGTRGTGKRTLIDSLHE 50 Query: 62 RDETAKPTL-----------------ALEYTFGRRARGHNTPKDI---AHLWELGGGISL 101 +T P + AL+Y + + +D + + Sbjct: 51 ISQTIYPKIRSNEMQSGKLRIAGSVSALDYVYLNVKNLDDQDEDTMAKLGFYIIDEETQ- 109 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 S L+ I + + V + ++LDLS+P E ++ + N ++ + L+ + R+ Sbjct: 110 SQLLPIVLKQNTVKDTLITIMLDLSEPWTFMEQLDKWIEMITNHLQSLQINLETLDQMRA 169 Query: 162 GKQRVPRVLHKDYPDREL-------------------------------ISPFPVPLLIV 190 +++ R + D + S +P++I+ Sbjct: 170 KVEKLFRDYKEPVLDSDGKLVKSDTQISPEEEAELIKLKSSVPLPEGSLTSNLGIPIVIL 229 Query: 191 GSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTER 250 +K D+ + ++ +++ LR YGASL+FTSSK++ ++ ++ +G + Sbjct: 230 ANKSDLIAQSNDQQSQIVLYYLRKYCLQYGASLVFTSSKNQESLEIYYEYMLHTLYGFKN 289 Query: 251 PKSISTDPSKPLAIPAGSDSLS 272 + IP+GSD+L+ Sbjct: 290 KNKSEIYTIDSIFIPSGSDNLN 311 >gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] gi|21615437|emb|CAC42262.2| Hypothetical protein C39E9.14b [Caenorhabditis elegans] gi|21684779|emb|CAD37351.1| Hypothetical protein C39E9.14b [Caenorhabditis elegans] Length = 441 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 62/329 (18%), Positives = 111/329 (33%), Gaps = 50/329 (15%) Query: 1 MPKVSSDTLW--DIAAAEVRSRESRTDEEEA------EEEDAHFPSQRTVFFMGSKAGGK 52 MP ++ L D A A + S TDEE + + TV +G GK Sbjct: 1 MPP-TAQPLEFDDTANAVLPVLYSSTDEEVGIWRELLASKKTNTNQGSTVIVLGDNRSGK 59 Query: 53 TTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAH-----------------LWEL 95 +++L R + D T KP L Y +W L Sbjct: 60 SSLLSRLDKSDRTVKPKSLLGYRVLHVQNDARDASYAYQLGTAGANLNPSELLQIPVWSL 119 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G + + L++ + + +L + PN L +++ Q +K + Sbjct: 120 DGNAACASLLKHAL-PATPAEAIFILTASIDNPN-LIHSLKRWANVCTEQAQKHFTK-ED 176 Query: 156 TGESRSGKQRVPRVL---------------------HKDYPDRELISPFPVPLLIVGSKF 194 RS ++++ + L V ++V +K Sbjct: 177 LKAGRSQQEKMWQEYVDPVQSQMSTSVVGSFADEHNLLPLDQGTLTENCGVTFMVVITKS 236 Query: 195 DIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI 254 D+ ++F + I LR GA+L+FTS+K + + +I +FGT + Sbjct: 237 DLGKEFTDAQFAKISIQLRKFCLSLGATLVFTSAKETKNIQLLQKYIVHRSFGTAFTSAA 296 Query: 255 STDPSKPLAIPAGSDSLSQIGPPVATEVD 283 + + +PAG D +I + D Sbjct: 297 QVIERESIFVPAGWDGEKKIDIIRESIPD 325 >gi|119479611|ref|XP_001259834.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] gi|119407988|gb|EAW17937.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] Length = 505 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 96/344 (27%), Gaps = 53/344 (15%) Query: 18 RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL------- 70 + + ++ P ++ + +G + + +T+ PTL Sbjct: 14 SKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFIETL--SADTSDPTLISEKRRG 70 Query: 71 ---------ALEYTFGRRARGHNTPK-DIAHLWELGGGI-SLSDLVQIPITADNVSFLSV 119 AL YT+ + L S + L++ +T +V V Sbjct: 71 RLPPVANQFALGYTYHDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTPQSVPETLV 130 Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDY----- 174 V++LD S P + + R V K + R D Sbjct: 131 VILLDWSDPWTWVRRLREWVRLLR-HVLISLDDETKIVMEEIMTEWKDRKRGMDSGAQGL 189 Query: 175 -----------PDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 E +P+ +V D + E+ I + +R + Sbjct: 190 ASSGGPVTIPPGPGEWDEGLGIPMCVVCQGADKIEKLEKEHGWREEEFDFILQFMRTILL 249 Query: 218 FYGASLIFTSSKSETTMSKSR--SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 +GASL +T++ ++ S + K D K + +P DS +I Sbjct: 250 KHGASLTYTTTFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPPNWDSWGKIR 308 Query: 276 PPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPV 319 G A + + E + + D Sbjct: 309 IIREGFDMEGVSTAWSI--EIQDAPE----PLTGAVDQPQDDSA 346 >gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [Caenorhabditis briggsae] gi|39587719|emb|CAE58657.1| Hypothetical protein CBG01826 [Caenorhabditis briggsae] Length = 391 Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats. Identities = 63/326 (19%), Positives = 111/326 (34%), Gaps = 49/326 (15%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEA------EEEDAHFPSQRTVFFMGSKAGGKTTILL 57 L D A A + S TD+E + + TV +G GK+++L Sbjct: 5 TQQQELDDTANAVLPVLYSSTDDEVGIWREVLASKKTNTNQGSTVIVLGDNRCGKSSLLA 64 Query: 58 RFLERDETAKPTLALEYTFGRRARGHNTPKDIAH-----------------LWELGGGIS 100 R + D ++KP L Y +W L G S Sbjct: 65 RLDKSDRSSKPKSLLGYRVLHVQNDARDASYAYQLGTAGANLNPSELLQIPVWSLDGNES 124 Query: 101 LSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR 160 + L++ + S + +L + PN L +++ Q +K + + R Sbjct: 125 CASLLKYAL-PATPSEVVFILSASIDNPN-LINSLKRWANVCTEQAQKHFSK-EDLKAGR 181 Query: 161 SGKQRVPRVL---------------------HKDYPDRELISPFPVPLLIVGSKFDIF-- 197 + ++R+ + LI V ++V +K D+ Sbjct: 182 NQQERMWQEYVDPVQSHMSTSVVGSFADEHSLLPLDQGTLIENCGVTFMVVITKSDLVLG 241 Query: 198 QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTD 257 ++F + I LR L GA+LIFTS+K + + +I +FGT + Sbjct: 242 KEFTDAQFAKISIQLRKLCLSLGATLIFTSTKESKNIQLLQKYIVHRSFGTAFTSAAQVI 301 Query: 258 PSKPLAIPAGSDSLSQIGPPVATEVD 283 + +PAG D +I + D Sbjct: 302 ERDSIFVPAGWDGEKKIDIIRESIPD 327 >gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT00019900001 [Paramecium tetraurelia strain d4-2] gi|124421326|emb|CAK86207.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 31/305 (10%) Query: 39 QRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 Q + F G GK+TI+ + ++ + L YT ++ + + +E+ G Sbjct: 21 QHSFVFCGQTQSGKSTIVSKLT--SQSIQEQAGLIYT--QQKTNIIGYQAVLQYFEVSGQ 76 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLS-KPNALWETMESLLGSARNQVEKVCAALQKTG 157 + L+ +P+ + S +LV+DLS P+ + + + + + EK LQ++ Sbjct: 77 -AFKQLLTLPLNKQSYQQYSYILVIDLSDNPHEILNVCNTEIRYIKEETEK---KLQQSI 132 Query: 158 ESRSGKQRVPRVLHK--DYPDRELISPFPVPLLIVGSKFDIF-QDFDSEKRKVICKTLRF 214 + + KQ + K + D+ I P VP++IVG K+D+F ++ D E RK I + LR+ Sbjct: 133 DVDTFKQLELNIYDKIMMHHDKNRIIPSYVPIIIVGWKYDLFSKNLDQESRKWITRGLRY 192 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI-STDPSKPLAIPAGSDSLSQ 273 LAH SL+F S++ + ++ L + + I D K L I SDS+ Sbjct: 193 LAHSNNCSLVFGSNQDYQLVKQT------LQYNVKPSAPIYQFDHLKQLCITQLSDSIEN 246 Query: 274 IGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDP---QFSEPLID 330 I P + NP D + K+ + ++K+ + + + + E ID Sbjct: 247 INLPPS---------GNNPLDGFNKIIKDQIVAVVNNQKKKKQSKISEEDWDNYKEEKID 297 Query: 331 SIRAQ 335 + Q Sbjct: 298 RLIKQ 302 >gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] Length = 209 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 68/174 (39%), Gaps = 12/174 (6%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTRAR-----------SKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP 175 V D+S+P + E+++ R ++K+ +K E + + + Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEE 189 >gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] gi|21615436|emb|CAA94342.2| Hypothetical protein C39E9.14a [Caenorhabditis elegans] gi|21684778|emb|CAA97773.2| Hypothetical protein C39E9.14a [Caenorhabditis elegans] Length = 443 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 111/331 (33%), Gaps = 52/331 (15%) Query: 1 MPKVSSDTLW--DIAAAEVRSRESRTDEEEA------EEEDAHFPSQRTVFFMGSKAGGK 52 MP ++ L D A A + S TDEE + + TV +G GK Sbjct: 1 MPP-TAQPLEFDDTANAVLPVLYSSTDEEVGIWRELLASKKTNTNQGSTVIVLGDNRSGK 59 Query: 53 TTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAH-----------------LWEL 95 +++L R + D T KP L Y +W L Sbjct: 60 SSLLSRLDKSDRTVKPKSLLGYRVLHVQNDARDASYAYQLGTAGANLNPSELLQIPVWSL 119 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G + + L++ + + +L + PN L +++ Q +K + Sbjct: 120 DGNAACASLLKHAL-PATPAEAIFILTASIDNPN-LIHSLKRWANVCTEQAQKHFTK-ED 176 Query: 156 TGESRSGKQRVPRVL---------------------HKDYPDRELISPFPVPLLIVGSKF 194 RS ++++ + L V ++V +K Sbjct: 177 LKAGRSQQEKMWQEYVDPVQSQMSTSVVGSFADEHNLLPLDQGTLTENCGVTFMVVITKS 236 Query: 195 DIF--QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 D+ ++F + I LR GA+L+FTS+K + + +I +FGT Sbjct: 237 DLVLGKEFTDAQFAKISIQLRKFCLSLGATLVFTSAKETKNIQLLQKYIVHRSFGTAFTS 296 Query: 253 SISTDPSKPLAIPAGSDSLSQIGPPVATEVD 283 + + + +PAG D +I + D Sbjct: 297 AAQVIERESIFVPAGWDGEKKIDIIRESIPD 327 >gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT00009430001 [Paramecium tetraurelia strain d4-2] gi|124407696|emb|CAK73082.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 72/305 (23%), Positives = 133/305 (43%), Gaps = 31/305 (10%) Query: 39 QRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 Q + G GK+TI+ + + + L + ++ + + +E+ G Sbjct: 21 QHSFVLCGQPQSGKSTIVSKLT--SQQIQDQAGL--IYAQQKTNIIGYQAVLQYFEISGQ 76 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLS-KPNALWETMESLLGSARNQVEKVCAALQKTG 157 + L+ +P+ + S VLV+DLS P+ + + + R + EK LQ++ Sbjct: 77 -AFKQLLTLPLNKQSYQQYSYVLVIDLSDNPHEILNVCNAEIRYIREETEK---KLQQSI 132 Query: 158 ESRSGKQRVPRVLHK--DYPDRELISPFPVPLLIVGSKFDIF-QDFDSEKRKVICKTLRF 214 + + KQ + K + D+ I P VP++IVG K+D+F ++ D E RK I + LR+ Sbjct: 133 DVDTFKQLELNIYDKIMMHHDKNRIVPLYVPIIIVGWKYDLFSKNLDLESRKWITRGLRY 192 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI-STDPSKPLAIPAGSDSLSQ 273 LAH SL+F S++ + ++ L + + SI D K + I SDS+ Sbjct: 193 LAHTNNCSLVFGSNQDYQFVRQT------LQYHVKPTASIYQYDHLKQICITQLSDSIEN 246 Query: 274 IGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDP---QFSEPLID 330 I P + NP D + K+ + ++K+ + + + + E ID Sbjct: 247 INLPPS---------GNNPLDGFNKIIKDQIVAVVNNQKKKKQSKITEEDWNNYKEEKID 297 Query: 331 SIRAQ 335 + Q Sbjct: 298 RLIKQ 302 >gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus oryzae] Length = 523 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 52/362 (14%), Positives = 94/362 (25%), Gaps = 58/362 (16%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK----------- 67 + + ++ P ++ + +G + L Sbjct: 27 KKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFLDTLSADTSDPSLSNDRRKGRLP 85 Query: 68 ---PTLALEYTFGRRARGHNTPK-DIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVLV 122 AL YT+ + L S + L++ +TA +V VV++ Sbjct: 86 PVANQFALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTAQSVPETLVVIL 145 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD--------- 173 LD S P + + R V K + + R D Sbjct: 146 LDWSDPWTWVRRLREWVRLLR-HVLISLDDETKIVMEETMTEWRDRKRGMDPSSTGAQGL 204 Query: 174 ----------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 E +P+ +V D + E+ I + +R + Sbjct: 205 TSSGGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEEFDFILQFMRTILL 264 Query: 218 FYGASLIFTSSK--SETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 +GASLI+T+ + S + K D K + +P+ DS +I Sbjct: 265 KHGASLIYTTPFLVNSLQSLLHSSLGIHSLLKRQSLKHNVIDRDK-ILVPSNWDSWGKIR 323 Query: 276 PPVATEVDIGTLHAKNPFDLWKKVF--------EKVFPHESTRERKELKDPVKDPQFSEP 327 G A + + + P L D E Sbjct: 324 IIREGFDMEGVSTAWSI--EIQDPPEPLSGSSMDDAKPQ--GENAAGLDDGTSAVAIFEQ 379 Query: 328 LI 329 I Sbjct: 380 TI 381 >gi|67536988|ref|XP_662268.1| hypothetical protein AN4664.2 [Aspergillus nidulans FGSC A4] gi|40741516|gb|EAA60706.1| hypothetical protein AN4664.2 [Aspergillus nidulans FGSC A4] Length = 522 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 57/388 (14%), Positives = 105/388 (27%), Gaps = 71/388 (18%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFFMGSKA----------------------------- 49 + + ++ P ++ + +G+ A Sbjct: 17 KKNIWSSMLDSAATGKRLP-EKNLLILGATALLSFGSSLTPPCLGGTPESQREFLEAYSA 75 Query: 50 -GGKTTILLRFLERDETAKP---TLALEYTFGRRARGHNTPK-DIAHLWELGGGI-SLSD 103 +++ + P AL YT+ + L S + Sbjct: 76 DTLDSSLSNEKRKGKGKVPPVANQFALGYTYLDVLDADQEDTLARVSAYLLSEPSLSFAP 135 Query: 104 LVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGK 163 L++ +T ++ SVV++LD S P + + R V K + Sbjct: 136 LLKPLLTPQSIPETSVVILLDWSDPWTWVRRLREWVRLLR-HVLVSLDDETKVVMEENMT 194 Query: 164 QRVPRVLHKD---------------YPDRELISPFPVPLLIVGSKFDIF------QDFDS 202 Q R D E VPL +V D + Sbjct: 195 QWRERKKGIDTSSTGSQATSSGSAIIGPGEWDEGLGVPLCVVCQGTDKMEKLERDHGWSE 254 Query: 203 EKRKVICKTLRFLAHFYGASLIFTSSKSETTMS--KSRSFINQLAFGTERPKSISTDPSK 260 ++ I + +R L +GASLI+T + S K+ + K Sbjct: 255 DEFDFIHQFMRTLLVKHGASLIYTKPFHANNLHSVLHSSLGIHSLLKKLSLKANFIERDK 314 Query: 261 PLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVK 320 + IP DS ++I G A + + E S R + D Sbjct: 315 -ILIPTNWDSWAKIRVIREGSNLEGISTAWSI--EIQDPPE----PLSDRNDEAQDDGSS 367 Query: 321 DPQFSEPLIDSIRAQKDQELDQYKREQA 348 + + +Q + KR + Sbjct: 368 EEDDGTSAV----KIYEQTIKDPKRNTS 391 >gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT00034450001 [Paramecium tetraurelia strain d4-2] gi|124399480|emb|CAK64972.1| unnamed protein product [Paramecium tetraurelia] Length = 425 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 110/278 (39%), Gaps = 19/278 (6%) Query: 18 RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLA------ 71 +E+ ++ E+ + + +G K GK ++L + +T K + Sbjct: 2 SKKENVWNQLLFEKSRQGGFINKNLLILGRKCSGKRSLLDALADVTKTLKNGIRQKGITP 61 Query: 72 -LEYTFGRRARG---HNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 ++Y + +++ L L+ + N+ VV+ LD+ + Sbjct: 62 IVDYAYLNLIDLRDPDYNTNARLNVYIL-EEEGQKYLLPQILNHKNIKNTFVVIALDMQE 120 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKTGESRSGK-QRVPRVLHKDYPDRELISPFPVP 186 P E ++ +G ++ + + +L + E +S Q + ++ + L + +P Sbjct: 121 PWTFMEDLDRWIGVLQDMMADLRLSLNELEEMKSNVMQYMSQMDGGQAHEGLLKTNLGIP 180 Query: 187 LLIVGSKFDIFQDFD-----SEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFI 241 L+++ +K DI + D +K ++I LR YGA+L+FTS K + + ++ Sbjct: 181 LMVMVNKSDILERDDKGKDWDQKAEIIQFCLRQFCVNYGATLLFTSVKQKINIKVMYEYV 240 Query: 242 NQLAFGTER--PKSISTDPSKPLAIPAGSDSLSQIGPP 277 + + + + L IP G D ++ I Sbjct: 241 LHRLYNMPFETSQHKNLSDFESLFIPLGQDDINIIKST 278 >gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT00031450001 [Paramecium tetraurelia strain d4-2] gi|124395704|emb|CAK61219.1| unnamed protein product [Paramecium tetraurelia] Length = 435 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 110/278 (39%), Gaps = 19/278 (6%) Query: 18 RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLA------ 71 +E+ ++ E+ + + +G K GK ++L E +T K + Sbjct: 2 SKKENVWNQLLFEKSRQGGFINKNLVILGRKCSGKRSLLDSLAEITKTHKNAIRQKGITP 61 Query: 72 -LEYTFGRRARGHNTPK---DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSK 127 ++Y F + +++ L L+ + N+ VV+ LD+ + Sbjct: 62 IVDYAFLNLIDLRDPDYNTNARLNVYIL-EEEGQKYLLPQILNHKNIKNTFVVIALDMQE 120 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKTGESRSGK-QRVPRVLHKDYPDRELISPFPVP 186 P E ++ + ++ + + +L + E ++ Q + ++ + L + +P Sbjct: 121 PWTFMEDLDRWISVLQDMMADLRLSLNELEEMKANVMQYMSQMDGGQAHEGLLKTNLGIP 180 Query: 187 LLIVGSKFDIFQDFD-----SEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFI 241 L+++ +K DI + D +K ++I LR YGA+L+FTS K + + ++ Sbjct: 181 LMVMVNKSDILERDDKGKDWDQKAEIIQFCLRQFCVNYGATLLFTSVKQKINIKVMYEYV 240 Query: 242 NQLAFGTER--PKSISTDPSKPLAIPAGSDSLSQIGPP 277 + + + + L IP G D ++ I Sbjct: 241 LHRLYNMPFETSQHKNLSDFESLFIPLGQDDINIIKST 278 >gi|115398722|ref|XP_001214950.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191833|gb|EAU33533.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 508 Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats. Identities = 49/334 (14%), Positives = 94/334 (28%), Gaps = 41/334 (12%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKT--TILLRFLERDETAKP-TLALEYT 75 + + + P ++ + + + + + ++ + AL YT Sbjct: 27 KKNIWSSLLDNVANGKRLP-EKNLLILDTLSANPSDPSLSDEKRKGRVPPVANQFALGYT 85 Query: 76 FGRRARGHNTPK-DIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWE 133 + + L S + L++ +T ++ VV++LD S P Sbjct: 86 YQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTPQSIPETLVVILLDWSDPWTWVR 145 Query: 134 TMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDY-----------------PD 176 + + R V K + R D Sbjct: 146 RLREWVRLLR-HVLVSLDDETKIVMEEMMTEWRDRKRGMDAAGAQGLSGSGGPVTMPLGP 204 Query: 177 RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKS 230 E +P+ +V D + E+ I + LR + +GASLI+T+ Sbjct: 205 GEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEEFDFILQFLRTILLKHGASLIYTTPFL 264 Query: 231 ETTMSKSR--SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLH 288 ++ S + K D K + +P+ DS +I G Sbjct: 265 ANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPSNWDSWGKIRIIREGFDMEGVST 323 Query: 289 AKNPFDLWKKVFEKVFPHESTRERKELKDPVKDP 322 A + E E P +DP Sbjct: 324 AWS--------IEIQDLPEPLTNGPADDKPEEDP 349 >gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Coprinopsis cinerea okayama7#130] Length = 513 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 60/325 (18%), Positives = 108/325 (33%), Gaps = 75/325 (23%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 P+ + LWD V + + + + +G + GK+TI L+ Sbjct: 9 PEAPPENLWDSILNSVST--------------SRSIPAKQIILLGQPSTGKSTIASALLQ 54 Query: 62 RD------ETAKPTLALEYTFGRRARGHNTPKDIAHLWEL-GGGISLSDLVQIPITADN- 113 ++ + + A+ Y F + + + S ++L+ + Sbjct: 55 KNVSDENKDDGRIDFAVGYEFADVKDEEG----RSSRYLMPSSSHSYTNLLPHFVPPRTA 110 Query: 114 VSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD 173 + VV+VLD ++P E ++S L + K + + ++R P Sbjct: 111 LPHTCVVIVLDWTRPWTFIEELQSWLQWVEDWA-KGDGSREVEIVREENRERRP------ 163 Query: 174 YPDRELISP-FPVPLLIVGSKFDIFQDFD---------------SEKRKVICKTLRFLAH 217 L VP+++V SK D+ D E+ I + LR + Sbjct: 164 ---GTLTHNASGVPIIVVCSKADLIDDGPEIAAGAMVKGKGGEWEERTDGIMQVLRTICL 220 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERP------------------KSISTDPS 259 YGA L++T+ ET R + L F P K + D Sbjct: 221 KYGAGLLYTTPLPETL-QILRQYALHLLFMPPAPSPGMEAQVPMKNIFPFQHKPNTLDR- 278 Query: 260 KPLAIPAGSDSLSQIGPPVATEVDI 284 + +PAG DS +IG Sbjct: 279 DHILVPAGWDSWGKIG---VLREGF 300 >gi|158290784|ref|XP_312349.4| AGAP002589-PA [Anopheles gambiae str. PEST] gi|157018063|gb|EAA07717.5| AGAP002589-PA [Anopheles gambiae str. PEST] Length = 239 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 75/218 (34%), Gaps = 26/218 (11%) Query: 85 TPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARN 144 +W L L+ L++ + + ++L L ++ P + ++ + N Sbjct: 17 EESARLSIWTLAADPELNGLLKFALNERSFPHTLILLTLSMAAPWNWMDQLQYWMKVLDN 76 Query: 145 QVEKVCAALQKTGE--------------------SRSGKQRVPRVLHKDYPDRELISPFP 184 + + + + S +R ++ D L S Sbjct: 77 HIGGLEIDAELKHQCMARLMAKWQSYSDLGSDPLRNSPCKRSNELVPLPLEDAVLTSNLG 136 Query: 185 VPLLIVGSKFDIFQ------DFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 + +++V + D ++ E + + +R YGASL++T+ K+ Sbjct: 137 MEVIVVVKRSDQMATLRRELNYREEHFDFMQQAIRRAGLQYGASLVYTTVKNNINCDLLL 196 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 ++ +G S S + +PAG DS+ +I Sbjct: 197 QYLKHRIYGLPFGTSASVVEKDAVFVPAGWDSVQKISI 234 >gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vinifera] Length = 215 Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 76/230 (33%), Gaps = 51/230 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++KP E + L R+ + Sbjct: 72 ERYR-----AITSAYYRGALGALLVYDVTKPTTF-ENVSRWLKELRDHADSNIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 ++++G+K D+ R V + + A Sbjct: 120 -----------------------------IMLIGNKTDLKH-----LRAVATEDAQGFAE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 G S I TS+ T + K+ I + K++S+D P I G Sbjct: 146 KEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTLSSDDPAPAGIKEG 195 >gi|85002141|gb|ABC68472.1| Rab6A [Marsupenaeus japonicus] Length = 212 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 82/239 (34%), Gaps = 51/239 (21%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + F+G ++ GKT+++ RF+ D T + T+ +++ T LW+ G Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 L+ I V+V D++ N+ + R + Sbjct: 71 ERFRSLIPSYIRDS----TVAVVVYDITNANSF-HQTSKWIDDVRTERGSDVI------- 118 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ S+KR+V + A Sbjct: 119 ----------------------------IVLVGNKTDL-----SDKRQVSTEEGERKAKE 145 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 I TS+K+ + + + G E ++ D ++ + S++ + IG Sbjct: 146 LNVMFIETSAKAGYNVKQLFRRVAAALPGMESTENKKVDMTE--VVLRDSENAADIGRT 202 >gi|146164455|ref|XP_001013126.2| Ras family protein [Tetrahymena thermophila SB210] gi|146145792|gb|EAR92881.2| Ras family protein [Tetrahymena thermophila SB210] Length = 681 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 116/325 (35%), Gaps = 69/325 (21%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW+ E + + + V +G++ GK T++ E Sbjct: 5 EPSKKENLWNNILNETGQK--------------NKFQNKQVLVLGTRGTGKRTLIDSLHE 50 Query: 62 RDETAKPTL-----------------ALEYTFGRRARGHNTPKDI---AHLWELGGGISL 101 +T P + AL+Y + + +D + + Sbjct: 51 ISQTIYPKIRSNEMQSGKLRIAGSVSALDYVYLNVKNLDDQDEDTMAKLGFYIIDEETQ- 109 Query: 102 SDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 S L+ I + + V + ++LDLS+P E ++ + N ++ + L+ + R+ Sbjct: 110 SQLLPIVLKQNTVKDTLITIMLDLSEPWTFMEQLDKWIEMITNHLQSLQINLETLDQMRA 169 Query: 162 GKQRVPRVLHKDYPDR--------------------ELISPFPVP--------------L 187 +++ R + D +L S P+P Sbjct: 170 KVEKLFRDYKEPVLDSDGKLVKSDTQISPEEEAELIKLKSSVPLPEGSLTSNLVYKETYR 229 Query: 188 LIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFG 247 + K D+ + ++ +++ LR YGASL+FTSSK++ ++ ++ +G Sbjct: 230 FLNQIKSDLIAQSNDQQSQIVLYYLRKYCLQYGASLVFTSSKNQESLEIYYEYMLHTLYG 289 Query: 248 TERPKSISTDPSKPLAIPAGSDSLS 272 + + IP+GSD+L+ Sbjct: 290 FKNKNKSEIYTIDSIFIPSGSDNLN 314 Score = 85.3 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 70/202 (34%), Gaps = 45/202 (22%) Query: 48 KAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLV 105 K GK+ +L+R+ + D T+ +E+ + K +W+ G S +V Sbjct: 475 KGVGKSCMLIRYSKNDFVTDYNATIGVEFQSKIVKINDASVK--LQIWDTAGQESFRSIV 532 Query: 106 QIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQR 165 + + V+LV +++ + ++++ L A+ E+ Sbjct: 533 KSF----YKKTVGVLLVYNIANKESF-QSIKHWLTEAKENSEESAI-------------- 573 Query: 166 VPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIF 225 ++VG++ D +DF + RK+ + L F Sbjct: 574 ---------------------FVLVGAQSDREKDFCIKSRKISREEAEQFQKANQIDLFF 612 Query: 226 -TSSKSETTMSKSRSFINQLAF 246 SSK+ + + + AF Sbjct: 613 EVSSKNNSFIDECFEKTAYAAF 634 >gi|119183788|ref|XP_001242885.1| hypothetical protein CIMG_06781 [Coccidioides immitis RS] gi|90301671|gb|EAS31302.1| hypothetical protein CIMG_06781 [Coccidioides immitis RS] Length = 531 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 45/352 (12%), Positives = 104/352 (29%), Gaps = 53/352 (15%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK----------- 67 + + + P ++T+ +G + L + Sbjct: 31 KKNLWSSMLDGVASGKRLP-EKTLLVLGGTPESQREFLDTLSSDPSDPRLPSEKKKGKAP 89 Query: 68 ---PTLALEYTFGRRARGHNTP-KDIAHLWELGGG-ISLSDLVQIPITADNVSFLSVVLV 122 AL YT+ ++ L + + L++ + +V +V++ Sbjct: 90 PIANQFALGYTYRDVLDADQEDILSRVSIYLLSEPSPAFAPLLKPLLNPKSVRETLIVIL 149 Query: 123 LDLSKPNALWETMESLLGSAR----NQVEKVCAALQKTGESRSGKQR---------VPRV 169 LD P + + R + + +++ G++R Sbjct: 150 LDWESPWLWVRQLREWIRLLRSVLFSLDDDTKLVMEEIMMEWKGQRRGTDSTYPAGSSAP 209 Query: 170 LHKDYPDRELISPFPVPLLIVGS------KFDIFQDFDSEKRKVICKTLRFLAHFYGASL 223 + E +P+ +V K + + E+ I + +R + +G+SL Sbjct: 210 VSIPLGPGEWDEGLGIPMCVVCQGAEKIEKLEKDHGWREEEFDFILQFMRTILLKHGSSL 269 Query: 224 IFTSSKSETTMSKSR--SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATE 281 I+T+ ++ S + K D K + +P+ DS +I Sbjct: 270 IYTTPFLANSLQSLIHSSLGIHSLLKRQSFKHNVIDRDK-ILVPSNWDSWGKIRIIREGF 328 Query: 282 VDIGTLHAKNPFDLWK-------KVFEKVFPHESTRE-----RKELKDPVKD 321 G A + + + E+ E + ++DP +D Sbjct: 329 DMEGVGTAWSI--EIQESAGSGDEPAEREPNPEDGTSAVAIYEQTIQDPKRD 378 >gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis] gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis] Length = 216 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 74/230 (32%), Gaps = 51/230 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + + +K T+ +E+ R+ + A +W+ G Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFA--TRSINVDGKMIKAQIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+++ E +E L R+ E Sbjct: 72 ERYR-----AITSAYYRGAVGALLVYDITRHVTF-ENVERWLKELRDHTEHNIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + + A Sbjct: 120 -----------------------------VMLVGNKSDLRH-----LRAVSTEDAQTFAE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 G I TS+ T + + + + K++ A P G Sbjct: 146 REGLYFIETSALESTNVENAFKQVLTQIYRIVSKKALDVSEDNAAAPPQG 195 >gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HOMOLOG A2A); GTP binding [Arabidopsis thaliana] gi|3024516|sp|O04486|RB11C_ARATH Ras-related protein Rab11C gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene. [Arabidopsis thaliana] gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana] gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana] gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana] gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana] Length = 217 Score = 151 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 73/224 (32%), Gaps = 51/224 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++KP E + L R+ + Sbjct: 72 ERYR-----AITSAYYRGALGALLVYDVTKPTTF-ENVSRWLKELRDHADSNIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 ++++G+K D+ R V + + A Sbjct: 120 -----------------------------IMLIGNKTDLKH-----LRAVATEDAQSYAE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKP 261 G S I TS+ + K+ I + KSIS+D + Sbjct: 146 KEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTA 189 >gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, member RAS oncogene family [Macaca mulatta] Length = 304 Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 54/245 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 101 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 158 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 159 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 206 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 207 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 232 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G S I TS+ T + + I + K +S D + P+ ++ I P Sbjct: 233 KNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHVP 289 Query: 278 VATEV 282 TE Sbjct: 290 PTTEN 294 >gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Dictyostelium discoideum AX4] gi|60462801|gb|EAL61001.1| dynein light intermediate chain [Dictyostelium discoideum AX4] Length = 504 Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats. Identities = 68/371 (18%), Positives = 123/371 (33%), Gaps = 72/371 (19%) Query: 15 AEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRF--LERDETAKPTLAL 72 + + + ++ +R V +G GK+ +L +F + E+ K +AL Sbjct: 4 QQQQEEDIWGQILRESSNKNNYFEKRDVAILGDPTSGKSLLLSKFDTVSNVESLKS-IAL 62 Query: 73 EYTFGRRARGH--NTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 YTF P + W L G S +DL++ + +N+ V++ LD S+P Sbjct: 63 SYTFSDIYEDDTSEDPVGRINYWSLEGEASQNDLLKFSLNKENIKNCMVIITLDFSQPWN 122 Query: 131 LWETMESLLGSARNQV----------------------------------------EKVC 150 L E+++ LG + Sbjct: 123 LVESLKKWLGILEEHIKSIFKDDKNGFKNLQDKLSIKWHEYEEPTTTAATTTTTTTSNNI 182 Query: 151 AALQKTGESRSGKQRVPRV-----------------LHKDYPDRELISPFPVPLLIVGSK 193 + K + V + + LI+ VP+L+ K Sbjct: 183 ENNTNKTSPTTDKIQTNNVQKKKKKKVNISSAEDASVLPPLSENILINNLGVPILVACCK 242 Query: 194 FDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFG 247 D D+ E I + LR + YGA LI+TS++ E + +I + FG Sbjct: 243 SDSVVMLEKDFDYKDELFDYIQQYLRRICLQYGAGLIYTSARKEINCGVTLEYIENILFG 302 Query: 248 TERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKN-PFDLWKKVFEKVFPH 306 E + +PAG D+L++I + + P++ K + Sbjct: 303 FELKSKTQLIEKDQIFVPAGWDTLAKI---QVDFENQKVCKDTDEPYENIVKKPSIIKRR 359 Query: 307 ESTRERKELKD 317 E T+ + D Sbjct: 360 EQTQTNSIICD 370 >gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii] gi|3025293|sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 gi|806728|gb|AAA82729.1| YptC6 gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii] Length = 216 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 80/252 (31%), Gaps = 56/252 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + + +K T+ +E+ T K +W+ G Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K E +E L R+ + Sbjct: 72 ERYR-----AITSAYYRGAVGALLVYDITKSVTF-ENVERWLKELRDHADSNIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + + Sbjct: 120 -----------------------------IMLVGNKSDLKH-----LRDVQTEVAQAFCE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G S I TS+ T + K+ I + K + ++ ++P I G D + Sbjct: 146 REGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRP-KIGEGRD----VIVI 200 Query: 278 VATEVDIGTLHA 289 D G Sbjct: 201 DNAHDDGGKKKG 212 >gi|85089469|ref|XP_957965.1| hypothetical protein [Neurospora crassa OR74A] Length = 531 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 97/354 (27%), Gaps = 68/354 (19%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTI--------LLRFLER 62 D E +E + ++ P ++ + +G + L R +R Sbjct: 19 DSRNGEKEKKELWSSMLDSVASAKRLP-EKNILLLGGSVDSQREFFESLSRNELRRNTDR 77 Query: 63 DETAKPTLA----LEYTFGRRARGHNTPK-DIAHLWEL-GGGISLSDLVQIPITADNVSF 116 + KP +A L YT+ L+ L + + L+Q IT ++ Sbjct: 78 QGSRKPPIANSFALGYTYYDVLDADQEDTLARISLYTLTDPSPAFASLIQPLITPQSIPN 137 Query: 117 LSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT-------------------- 156 +V++LD S+P + + R +K+ T Sbjct: 138 TLIVILLDWSQPWKWMRQLREWILLLRTVFQKLNRECSATMEEVMTVWRERGRGGGLNLD 197 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGS---KFDIF---QDFDSEKRKVICK 210 G S + E +PL +V K D Q + E+ V+ + Sbjct: 198 GTSAVPTTSADADVSLPVGPGEWEDALGMPLCVVCQNAEKMDHLEKTQGWKEEEFDVVLQ 257 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 LR + +SL + K D K + +P DS Sbjct: 258 FLRTILLRLHSSLG-----------------IHSLLKKQPLKHNVIDRDK-ILVPPNWDS 299 Query: 271 LSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVF---PHESTRERKELKDPVKD 321 +I + W + P E + D Sbjct: 300 WGKI---RVLREGFDVEAVSSG---WTADLSIPWPRQPQRVANGDDEQQGETND 347 >gi|114675154|ref|XP_001147785.1| PREDICTED: similar to GTP-binding protein RAB11B [Pan troglodytes] Length = 348 Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 143 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 200 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 201 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 248 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 249 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 274 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 275 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 331 Query: 278 VATE 281 T+ Sbjct: 332 PTTD 335 >gi|149426497|ref|XP_001518037.1| PREDICTED: similar to rab11, partial [Ornithorhynchus anatinus] Length = 331 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 79/244 (32%), Gaps = 54/244 (22%) Query: 42 VFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 129 LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQE 186 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 IT+ +LV D++K +E +E L R+ + Sbjct: 187 RYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------- 233 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ R V R A Sbjct: 234 ----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAEK 260 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPV 278 G S I TS+ T + + I + K +S D + P+ ++ I P Sbjct: 261 NGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHVPP 317 Query: 279 ATEV 282 TE Sbjct: 318 TTEN 321 >gi|3024500|sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus] Length = 226 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 75/222 (33%), Gaps = 51/222 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G A GK+ IL RF + +K T+ +E+ H T K +W+ G Sbjct: 19 KVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKA--QIWDTAGQ 76 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 +T+ +LV D++K + + L RN +K Sbjct: 77 ERYR-----AVTSAYYRGAVGAMLVYDITKRQTF-DHIPRWLEELRNHADKNIV------ 124 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 ++++G+K D+ +R V + + A Sbjct: 125 -----------------------------IILIGNKCDLVN-----QRDVPTEDAKEFAE 150 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPS 259 G + TS+ T + + + + + KS++ D S Sbjct: 151 KEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADES 192 >gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago truncatula] Length = 220 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 71/219 (32%), Gaps = 51/219 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 17 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA--QIWDTAGQ 74 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++KP + + L R+ + Sbjct: 75 ERYR-----AITSAYYRGALGALLVYDVTKPTTF-DNVTRWLKELRDHADANIV------ 122 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 ++++G+K D+ R V + + A Sbjct: 123 -----------------------------IMLIGNKTDLKH-----LRAVATEDAQSYAE 148 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIST 256 G S I TS+ T + K+ + KS+ST Sbjct: 149 KEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLST 187 >gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus] Length = 216 Score = 148 bits (375), Expect = 4e-34, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 54/245 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G S I TS+ T + + I + K +S D + P+ ++ I P Sbjct: 145 KNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHMS-DRRENDMSPSN--NVVPIHVP 201 Query: 278 VATEV 282 TE Sbjct: 202 PTTEN 206 >gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] Length = 215 Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 78/230 (33%), Gaps = 51/230 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++KP E + L R+ + Sbjct: 72 ERYR-----AITSAYYRGALGALLVYDVTKPTTF-ENVSRWLKELRDHADSNIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 ++++G+K D+ R V + + A Sbjct: 120 -----------------------------IMLIGNKTDLKH-----LRAVATEDAQSYAE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 G + I TS+ T + K+ I + KS+S++ S P +I G Sbjct: 146 KEGLAFIETSALEATNVEKAFQTILSEIYRIVSKKSLSSEESAPASIKDG 195 >gi|15236081|ref|NP_195699.1| AtRABH1c (Arabidopsis Rab GTPase homolog H1c); GTP binding [Arabidopsis thaliana] gi|13272477|gb|AAK17177.1|AF325109_1 small GTP-binding protein-like [Arabidopsis thaliana] gi|14423430|gb|AAK62397.1|AF386952_1 small GTP-binding protein-like [Arabidopsis thaliana] gi|4490740|emb|CAB38902.1| small GTP-binding protein-like [Arabidopsis thaliana] gi|7271044|emb|CAB80652.1| small GTP-binding protein-like [Arabidopsis thaliana] gi|23197670|gb|AAN15362.1| small GTP-binding protein-like [Arabidopsis thaliana] Length = 214 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 71/212 (33%), Gaps = 48/212 (22%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + F+G ++ GKT+I+ RF+ + D T +PT+ +++ T LW+ G Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTV--RLQLWDTAGQ 68 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 L+ I + ++V D+S T + + R + + Sbjct: 69 ERFRSLIPSYIRDSS----VAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVI------- 117 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ EKR+V Sbjct: 118 ----------------------------IVLVGNKTDLV-----EKRQVSISEGEDKGKE 144 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTER 250 YG I TS+K + I G + Sbjct: 145 YGVMFIETSAKENFNIKALFRKIAAALPGVDS 176 >gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ustilago maydis 521] gi|46101753|gb|EAK86986.1| hypothetical protein UM06104.1 [Ustilago maydis 521] Length = 219 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 49/211 (23%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + F+G ++ GKT+++ RF+ D T + T+ +++ T LW+ G Sbjct: 5 KLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDTAGQ 62 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 L+ I + V+V D++ + T + R + Sbjct: 63 ERFRSLIPSYIRDSS----VAVVVYDITNRASFQNT-SKWVDDVRAERGNDVI------- 110 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ S+KR+V + A Sbjct: 111 ----------------------------IVLVGNKTDL-----SDKRQVTTEEAEKKAQE 137 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTE 249 + I TS+K+ + I Q G + Sbjct: 138 FNVMFIETSAKAGHNVKVLFKKIAQALPGMD 168 >gi|73987203|ref|XP_854399.1| PREDICTED: similar to RAB11B, member RAS oncogene family [Canis familiaris] Length = 410 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 205 RLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 262 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 263 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 310 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 311 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 336 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 337 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 393 Query: 278 VATE 281 T+ Sbjct: 394 PTTD 397 >gi|149692307|ref|XP_001496560.1| PREDICTED: similar to rab11 [Equus caballus] Length = 255 Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 79/244 (32%), Gaps = 54/244 (22%) Query: 42 VFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 53 IVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQE 110 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 IT+ +LV D++K +E +E L R+ + Sbjct: 111 RYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------- 157 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ R V R A Sbjct: 158 ----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAEK 184 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPV 278 G S I TS+ T + + I + K +S D + P+ ++ I P Sbjct: 185 NGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHVPP 241 Query: 279 ATEV 282 TE Sbjct: 242 TTEN 245 >gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (japonica cultivar-group)] gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa (japonica cultivar-group)] gi|125550513|gb|EAY96222.1| hypothetical protein OsI_017455 [Oryza sativa (indica cultivar-group)] gi|125592518|gb|EAZ32577.1| hypothetical protein OsJ_016060 [Oryza sativa (japonica cultivar-group)] Length = 220 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 70/221 (31%), Gaps = 51/221 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ K +W+ G Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKA--QIWDTAGQ 73 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ VLV D+SKP + + L R+ + Sbjct: 74 ERYR-----AITSAYYRGALGAVLVYDVSKPTTF-DNISRWLKELRDHAD---------- 117 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 + +++VG+K D+ R V A Sbjct: 118 -------------------------ANIRIMLVGNKTDLKH-----LRAVATDDAHKFAE 147 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 G S I TS+ T + ++ I + K +++D Sbjct: 148 AEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVASDE 188 >gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum] Length = 228 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 68/216 (31%), Gaps = 51/216 (23%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF D +K T+ +E+ + A +W+ G Sbjct: 29 KVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNI--DGKVIKAQIWDTAGQ 86 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ ++V D+ K + + S L R+ EK + Sbjct: 87 ERYR-----AITSAYYRGAVGALVVYDVCKLQSF-HNLTSWLNELRDHAEKNIVMM---- 136 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +VG+K D+ R V + RF A Sbjct: 137 -------------------------------LVGNKCDLRH-----LRNVGTEDARFFAQ 160 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKS 253 G S I TS+ T + ++ I Q + Sbjct: 161 QQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHP 196 >gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos] Length = 216 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G S I TS+ T + + I + K +S D + P+ ++ I P Sbjct: 145 KNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHVP 201 Query: 278 VATEV 282 T Sbjct: 202 PTTGN 206 >gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase Length = 184 Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 66/211 (31%), Gaps = 51/211 (24%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 22 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 79 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 80 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 127 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 128 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 153 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 G S I TS+ T + + I + Sbjct: 154 KNGLSFIETSALDSTNVEAAFQTILTEIYRI 184 >gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum] gi|738933|prf||2001457A GTP-binding protein Length = 215 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 75/224 (33%), Gaps = 51/224 (22%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G A GK+ +L RF E D +K T+ +E+ K +W+ G Sbjct: 14 KIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFL-SVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 +T+ ++V D+S+ ++++ L Q + A + Sbjct: 72 ERFR-----AVTSAYYRGAFGALVVYDISRRGTF-DSIKRWLDELTTQNDSTVARM---- 121 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +VG+K D+ R+V + + A Sbjct: 122 -------------------------------LVGNKCDL-----ESLREVSTEEGKAFAE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKP 261 G + TS+ T + K+ + + + K +++D K Sbjct: 146 EEGLFFMETSALDSTNVQKAFEIVIREIYNNISRKVLNSDSYKA 189 >gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp Length = 191 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 66/209 (31%), Gaps = 51/209 (24%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 31 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 88 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 89 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 136 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 137 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 162 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAF 246 G S I TS+ T + + I + Sbjct: 163 KNGLSFIETSALDSTNVEAAFQTILTEIY 191 >gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980] gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980] Length = 213 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 76/247 (30%), Gaps = 60/247 (24%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 11 KVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA--QIWDTAGQ 68 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+SK +E + L R+ + Sbjct: 69 ERYR-----AITSAYYRGAVGALLVYDISKHQT-YENVTRWLKELRDHADSNIV------ 116 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + + A Sbjct: 117 -----------------------------IMLVGNKSDLRH-----LRAVPTEEAKQFAS 142 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI---------PAGS 268 S I TS+ + + + I + K++ S I P S Sbjct: 143 ENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGDSAQATIGSGTNITLTPPPS 202 Query: 269 DSLSQIG 275 D ++ G Sbjct: 203 DEAAKGG 209 >gi|154285758|ref|XP_001543674.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150407315|gb|EDN02856.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 511 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 85/283 (30%), Gaps = 32/283 (11%) Query: 70 LALEYTFGRRARGHNTP-KDIAHLWELGGGIS-LSDLVQIPITADNVSFLSVVLVLDLSK 127 AL YT+ ++ L S + L++ +T V +V++LD Sbjct: 56 FALGYTYHDVLDADQEDILARVSIYLLSEPSSSFAPLLKPLLTPKTVPETLIVILLDWEN 115 Query: 128 PNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLH---------------- 171 P ++ + R+ + + K + Sbjct: 116 PWTWVRQLQEWIRLLRSVLISL-DDETKVVMEEVMTEWRDHKRGGDPASSAGGGMTTSGG 174 Query: 172 ---KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGAS 222 E +P+ +V D + E+ I + +R + +GAS Sbjct: 175 PVTIPLGPGEWDEGLGIPMCVVCQGADKIEKLEKEHGWHEEEFDFILQFMRTILLKHGAS 234 Query: 223 LIFTSSKSETTMSKSR--SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVAT 280 LI+T+ ++ S + K D K + IP+ DS +I Sbjct: 235 LIYTTPFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILIPSNWDSWGKIRIIREG 293 Query: 281 EVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQ 323 G + ++ K + E+ + ++ ++ + Sbjct: 294 FDIEGVGTGWSI-EIQDKPKQFRGVSETDGDNQDEENTKNNSG 335 >gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic construct] gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct] gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct] gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct] gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct] gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct] Length = 217 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 54/245 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G S I TS+ T + + I + K +S D + P+ ++ I P Sbjct: 145 KNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHVP 201 Query: 278 VATEV 282 TE Sbjct: 202 PTTEN 206 >gi|147834571|emb|CAN69655.1| hypothetical protein [Vitis vinifera] gi|157328940|emb|CAO23670.1| unnamed protein product [Vitis vinifera] gi|157330715|emb|CAO48972.1| unnamed protein product [Vitis vinifera] Length = 215 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 73/224 (32%), Gaps = 51/224 (22%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G A GK+ +L R+ E D +K T+ +E+ K +W+ G Sbjct: 11 KIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKEVKA--QIWDTAGQ 68 Query: 99 ISLSDLVQIPITADNVSFL-SVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 +T+ +LV D+S+ + E++ L + + A + Sbjct: 69 ERFR-----AVTSAYYRGAFGALLVYDISRRSTF-ESIARWLDELKIHCDTTVARM---- 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +VG+K D+ R V + + LA Sbjct: 119 -------------------------------LVGNKCDL-----ENIRDVSTEEGKNLAE 142 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKP 261 G + TS+ T + + + + F K + +D K Sbjct: 143 AEGLFFMETSALDATNVKTAFEMVIREIFNNVSRKVLHSDSYKA 186 >gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica] Length = 215 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 73/230 (31%), Gaps = 53/230 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++KP + L R+ + Sbjct: 72 ERYR-----AITSAYYRGAVGALLVYDVTKPTTFE---QVWLKELRDHADSNIV------ 117 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 ++++G+K D+ LR A Sbjct: 118 -----------------------------IMLIGNKTDLKHSRAVRTEDAQGFMLRKKAL 148 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAF-GTERPKSISTDPSKPLAIPA 266 S I TS+ T + K+ I L F G KS+S+D P I Sbjct: 149 ----SFIETSALKATNVEKAFQTILCLRFTGIISKKSLSSDEPAPSVIKE 194 >gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis] Length = 218 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 44/248 (17%), Positives = 76/248 (30%), Gaps = 54/248 (21%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K G+ ++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIAERSAHDESPGN-NVVDISVP 201 Query: 278 VATEVDIG 285 T+ G Sbjct: 202 PTTDSQRG 209 >gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10] gi|150854657|gb|EDN29849.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10] Length = 213 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 76/247 (30%), Gaps = 60/247 (24%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 11 KVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA--QIWDTAGQ 68 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+SK +E + L R+ + Sbjct: 69 ERYR-----AITSAYYRGAVGALLVYDISKHQT-YENVTRWLKELRDHADSNIV------ 116 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + + A Sbjct: 117 -----------------------------IMLVGNKSDLRH-----LRAVPTEEAKQFAS 142 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI---------PAGS 268 S I TS+ + + + I + K++ S I P S Sbjct: 143 ENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGDSAQATIASGTNITLTPPPS 202 Query: 269 DSLSQIG 275 D ++ G Sbjct: 203 DEAAKGG 209 >gi|4758984|ref|NP_004654.1| Ras-related protein Rab-11A [Homo sapiens] gi|13592148|ref|NP_112414.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|31980840|ref|NP_059078.2| RAB11a, member RAS oncogene family [Mus musculus] gi|54792725|ref|NP_001003276.1| Ras-related protein Rab-11A [Canis lupus familiaris] gi|72535192|ref|NP_001026958.1| Ras-related protein Rab-11A [Sus scrofa] gi|126722661|ref|NP_001075720.1| tubulovesicle-associated protein [Oryctolagus cuniculus] gi|73999640|ref|XP_855589.1| PREDICTED: rab11 GTP-binding protein [Canis familiaris] gi|114657631|ref|XP_510490.2| PREDICTED: similar to rab11 [Pan troglodytes] gi|126277069|ref|XP_001367185.1| PREDICTED: similar to rab11 [Monodelphis domestica] gi|50402540|sp|P62494|RB11A_RAT Ras-related protein Rab-11A (Rab-11) (24KG) gi|50402541|sp|P62490|RB11A_CANFA Ras-related protein Rab-11A (Rab-11) gi|50402542|sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A (Rab-11) (YL8) gi|50402543|sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A (Rab-11) gi|50402544|sp|P62493|RB11A_RABIT Ras-related protein Rab-11A (Rab-11) gi|75056558|sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A gi|75070685|sp|Q5R9M7|RB11A_PONPY Ras-related protein Rab-11A gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens] gi|917|emb|CAA39799.1| rab11 [Canis familiaris] gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens] gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein gi|310067|gb|AAA31491.1| tubulovesicle-associated protein gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens] gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens] gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus] gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus] gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens] gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens] gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens] gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens] gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens] gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo pygmaeus] gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct] gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct] gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa] gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus] gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus] gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus] gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus] gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct] gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct] gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus] gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|1089909|prf||2018147A GTP-binding protein rab11 Length = 216 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 54/245 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G S I TS+ T + + I + K +S D + P+ ++ I P Sbjct: 145 KNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHVP 201 Query: 278 VATEV 282 TE Sbjct: 202 PTTEN 206 >gi|57524801|ref|NP_001005827.1| Ras-related protein Rab-11A [Gallus gallus] gi|82233797|sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A gi|53133464|emb|CAG32061.1| hypothetical protein [Gallus gallus] Length = 216 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 54/245 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G S I TS+ T + + I + K +S D + P+ ++ I P Sbjct: 145 KNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHVP 201 Query: 278 VATEV 282 TE Sbjct: 202 PTTEN 206 >gi|84000297|ref|NP_001033251.1| hypothetical protein LOC534708 [Bos taurus] gi|116255983|sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A gi|83405346|gb|AAI11144.1| Similar to RAB11a, member RAS oncogene family [Bos taurus] Length = 216 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 79/245 (32%), Gaps = 54/245 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G S I TS+ T + + I + K +S D + P+ ++ I P Sbjct: 145 KNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHVP 201 Query: 278 VATEV 282 TE Sbjct: 202 PTTEN 206 >gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15] Length = 215 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 70/221 (31%), Gaps = 51/221 (23%) Query: 37 PSQRTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWE 94 P+ T +G GK+ +L RF + +K T+ +E+ T K +W+ Sbjct: 10 PACHTFVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA--QIWD 67 Query: 95 LGGGISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 G IT+ +LV D+SK +E + L R+ + Sbjct: 68 TAGQERYR-----AITSAYYRGAVGALLVYDISKHQT-YENVTRWLKELRDHADSNIV-- 119 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + + Sbjct: 120 ---------------------------------IMLVGNKSDLRH-----LRAVPTEEAK 141 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI 254 A S I TS+ + + + I + K++ Sbjct: 142 QFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL 182 >gi|78057535|gb|ABB17267.1| secretion related GTPase C [Aspergillus niger] Length = 210 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 49/222 (22%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTP 86 ++ + + F+G ++ GKT+++ RF+ D T + T+ +++ T Sbjct: 6 GVGSYSNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV 65 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 LW+ G L+ I + V+V D+S + T + R + Sbjct: 66 --RLQLWDTAGQERFRSLIPSYIRDSS----VAVVVYDISNAKSFQNT-RKWIDDVRGER 118 Query: 147 EKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRK 206 +++VG+K D+ ++KR+ Sbjct: 119 GNDVI-----------------------------------IVLVGNKTDL-----NDKRE 138 Query: 207 VICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 V A G I TS+K + + I Q G Sbjct: 139 VTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGM 180 >gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var. neoformans B-3501A] Length = 213 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 53/226 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKA--QIWDTAGQ 69 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E + L R+ + Sbjct: 70 ERYR-----AITSAYYRGAVGALLVYDIAKHQT-YENVTRWLKELRDHADANIV------ 117 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + A Sbjct: 118 -----------------------------IMLVGNKSDLKH-----LRAVSTDEAKQFAT 143 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIST--DPSKP 261 G S I TS+ + + + I + KS+ + D KP Sbjct: 144 ENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIKP 189 >gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa] gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A] Length = 214 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 66/215 (30%), Gaps = 51/215 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 11 KVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA--QIWDTAGQ 68 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+SK E + L R+ ++ Sbjct: 69 ERYR-----AITSAYYRGAVGALLVYDISKGVTF-ENVNRWLKELRDHADQNIV------ 116 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + + A Sbjct: 117 -----------------------------IMLVGNKSDLRH-----LRAVPTEDAKKFAE 142 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 S I TS+ T + + I + K Sbjct: 143 ENHLSFIETSALDATNVELAFQNILTEIYKIVSTK 177 >gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966] Length = 213 Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 82/252 (32%), Gaps = 56/252 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + ++ T+ +E+ R+ + A +W+ G Sbjct: 12 KVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFA--TRSINVDGKTIKAQIWDTAGQ 69 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K + + L R+ + Sbjct: 70 ERYR-----AITSAYYRGAVGALLVYDIAKHSTYVN-VSRWLKELRDHADSNIV------ 117 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + + A Sbjct: 118 -----------------------------VMLVGNKSDLRH-----LRAVPTEEAKAFAA 143 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ + + ++ I + K++ + + P+G ++ I Sbjct: 144 ENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSSDD--VIKPSGGET---ISVQ 198 Query: 278 VATEVDIGTLHA 289 +T+ T Sbjct: 199 PSTDDGGQTKKG 210 >gi|145251179|ref|XP_001397103.1| hypothetical protein An15g05740 [Aspergillus niger] gi|134082633|emb|CAK42527.1| unnamed protein product [Aspergillus niger] Length = 209 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 49/222 (22%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTP 86 ++ + + F+G ++ GKT+++ RF+ D T + T+ +++ T Sbjct: 6 GVGSYSNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV 65 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 LW+ G L+ I + V+V D+S + T + R + Sbjct: 66 --RLQLWDTAGQERFRSLIPSYIRDSS----VAVVVYDISNAKSFQNT-RKWIDDVRGER 118 Query: 147 EKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRK 206 +++VG+K D+ ++KR+ Sbjct: 119 GNDVI-----------------------------------IVLVGNKTDL-----NDKRE 138 Query: 207 VICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 V A G I TS+K + + I Q G Sbjct: 139 VTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGM 180 >gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] Length = 218 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 75/244 (30%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K G+ ++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIAERSAHGESPGN-NVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi] Length = 215 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 78/234 (33%), Gaps = 52/234 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K + +E +E L R+ ++ Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAK-HVTYENVERWLKELRDHADQNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEAKAYAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 S I TS+ T + + + I + + K + D ++ GS+ + Sbjct: 145 KNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHVGGD-NRAAISTPGSNGI 197 >gi|154303178|ref|XP_001551997.1| hypothetical protein BC1G_09609 [Botryotinia fuckeliana B05.10] gi|150855072|gb|EDN30264.1| hypothetical protein BC1G_09609 [Botryotinia fuckeliana B05.10] Length = 517 Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 99/302 (32%), Gaps = 41/302 (13%) Query: 18 RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTIL--------LRFLERDETAKPT 69 ++ + + P ++ + +G A + L + +R + +P Sbjct: 20 EKKDMWSSMLDGVASGKRLP-EKNILVLGGTADSQKEFLEALSVDETRKSQDRQSSKQPP 78 Query: 70 LA----LEYTFGRRARGHNTP-KDIAHLWELGGG-ISLSDLVQIPITADNVSFLSVVLVL 123 +A L YT+ + L+ L S + L+Q +T + +V++L Sbjct: 79 IANNFALGYTYHDVLDADHEDILARLSLYLLADPSPSFTPLMQPLLTPQTIPNTLIVILL 138 Query: 124 DLSKPNALWETMESLLGSAR-----------NQVEKVCAALQKTGESRS-----GKQRVP 167 D S+P + + + R ++E+V + + G S G Sbjct: 139 DWSQPWFWLKELRDWIRLLRPLLISLDEDCKEKMEEVMISWRDRGRGGSTLDGGGSTATE 198 Query: 168 RVLHKDYPDRELISPFPVPLLIVGSKFDIF---QDFDSEKRKVICKTLRFLAHFYGASLI 224 + E +PL V K + + + ++ + + LR + +GASLI Sbjct: 199 GDVSLPLGPGEWEEALGLPLC-VSDKIETLEKERSWREDEFDYVLQFLRTILLKHGASLI 257 Query: 225 FTSS--KSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEV 282 +T+ S S + + D K + +P DS +I Sbjct: 258 YTTPGVISPLQGLIHSSLGIHSLLKRQPIRHNLIDRDK-VVVPPNWDSWGKI---RVLRE 313 Query: 283 DI 284 Sbjct: 314 GF 315 >gi|71002422|ref|XP_755892.1| RAS small monomeric GTPase Rab6, putative [Aspergillus fumigatus Af293] gi|119481981|ref|XP_001261019.1| rab6 [Neosartorya fischeri NRRL 181] gi|66853530|gb|EAL93854.1| RAS small monomeric GTPase Rab6, putative [Aspergillus fumigatus Af293] gi|119409173|gb|EAW19122.1| rab6 [Neosartorya fischeri NRRL 181] Length = 207 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 49/222 (22%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTP 86 ++ + + F+G ++ GKT+++ RF+ D T + T+ +++ T Sbjct: 5 GVGSYSNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV 64 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 LW+ G L+ I + V+V D+S + T + R + Sbjct: 65 --RLQLWDTAGQERFRSLIPSYIRDSS----VAVVVYDISNAKSFQNT-RKWIDDVRGER 117 Query: 147 EKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRK 206 +++VG+K D+ ++KR+ Sbjct: 118 GNDVI-----------------------------------IVLVGNKTDL-----NDKRE 137 Query: 207 VICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 V A G I TS+K + + I Q G Sbjct: 138 VTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGM 179 >gi|15230422|ref|NP_187823.1| AtRABA4d (Arabidopsis Rab GTPase homolog A4d); GTP binding [Arabidopsis thaliana] gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana] gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana] gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana] Length = 222 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 71/224 (31%), Gaps = 51/224 (22%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G A GKT +L RF E +K T+ +E+ + T K +W+ G Sbjct: 17 KVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKA--QIWDTAGQ 74 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 +T+ +LV D++K + + M L R +K Sbjct: 75 ERYR-----AVTSAYYRGAVGAMLVYDMTKRQSF-DHMAKWLEELRGHADKNIV------ 122 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 ++++G+K D+ R V + + A Sbjct: 123 -----------------------------IMLIGNKCDLG-----SLRAVPTEDAQEFAQ 148 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKP 261 + TS+ T + + I + KS++ D Sbjct: 149 RENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDDA 192 >gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum] Length = 218 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 74/240 (30%), Gaps = 58/240 (24%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GK+ +L RF + +K T+ +E+ + A +W+ G Sbjct: 18 KIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNI--DGKVIKAQIWDTAGQ 75 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+ + +E L + EK Sbjct: 76 ERYR-----AITSAYYRGAVGALLVYDVCVLQSFRN-LEIWLKELNDHAEKNIV------ 123 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + RF A Sbjct: 124 -----------------------------VMLVGNKCDLRH-----LRSVGTEDARFFAQ 149 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKS--ISTD-----PSKPLAIPAGSDS 270 G S I TS+ T + ++ I Q + + D + + +D+ Sbjct: 150 QQGLSFIETSALDSTNVEEAFCQILQNIYSIVSSHPPVNNIDMKMSLHNNQPIVSPNADN 209 >gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa (japonica cultivar-group)] gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa (japonica cultivar-group)] gi|125595229|gb|EAZ35288.1| hypothetical protein OsJ_018771 [Oryza sativa (japonica cultivar-group)] Length = 217 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 33/230 (14%), Positives = 71/230 (30%), Gaps = 52/230 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + + +K T+ +E+ K +W+ G Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ ++V D+++ E +E + ++ + Sbjct: 72 ERYR-----AITSAYYRGAVGALVVYDVTRHVTF-ENVERWMRELKDHTDANIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + + A Sbjct: 120 -----------------------------IMLVGNKADLRH-----LRAVSTEDAKAFAE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A P G Sbjct: 146 KENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIG-DDPAAPPKG 194 >gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] Length = 218 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 75/244 (30%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K D P ++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QMVDRPGHDESPGN--NVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|15222396|ref|NP_172221.1| AtRABA2b (Arabidopsis Rab GTPase homolog A2b); GTP binding [Arabidopsis thaliana] Length = 214 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 69/221 (31%), Gaps = 51/221 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GK+ IL RF + +K T+ +E+ T K +W+ G Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K + L R+ + Sbjct: 72 ERYR-----AITSAYYRGAVGALLVYDITKRQTFENVL-RWLRELRDHADSNIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++ G+K D+ R V + R LA Sbjct: 120 -----------------------------IMMAGNKSDLNH-----LRSVADEDGRSLAE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 G S + TS+ T + K+ I + K+++ Sbjct: 146 KEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQE 186 >gi|83770344|dbj|BAE60477.1| unnamed protein product [Aspergillus oryzae] Length = 209 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 74/222 (33%), Gaps = 49/222 (22%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTP 86 A ++ + + F+G ++ GKT+++ RF+ D T + T+ +++ T Sbjct: 6 AVGSYSNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV 65 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 LW+ G L+ I + V+V D+S + T + R + Sbjct: 66 --RLQLWDTAGQERFRSLIPSYIRDSS----VAVVVYDISNAKSFQNT-RKWIDDVRGER 118 Query: 147 EKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRK 206 +++VG+K D+ ++KR+ Sbjct: 119 GNDVI-----------------------------------IVLVGNKTDL-----NDKRE 138 Query: 207 VICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 V A G I TS+K + + I Q G Sbjct: 139 VTTAQGEEEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGM 180 >gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Danio rerio] gi|29294722|gb|AAH48889.1| Zgc:55760 [Danio rerio] Length = 218 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 75/244 (30%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 RVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K D P ++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QMVDRPGHDESPGN--NVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|108706608|gb|ABF94403.1| Ras-related protein Rab-6A, putative, expressed [Oryza sativa (japonica cultivar-group)] Length = 215 Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 78/234 (33%), Gaps = 50/234 (21%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++ + F+G +A GKT I+ RF+ + D T + T+ +++ T LW+ Sbjct: 9 AKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTV--RLQLWDT 66 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G L+ I + V+V D++ + ++ + Q Sbjct: 67 AGQERFRSLIPSYIRDSS----VAVIVYDVTDRQSFL-SISKWIEEVNTQRGGDVI---- 117 Query: 156 TGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL 215 +++VG+K D+ +KR++ Sbjct: 118 -------------------------------IVLVGNKTDLV-----DKRQISTDEGEAK 141 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI-STDPSKPLAIPAGS 268 A +GA + TS+K+ + I G E S D PA S Sbjct: 142 AQEHGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSSAKQEDMVDINLRPAAS 195 >gi|42543204|pdb|1OIW|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gtpgammas gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp And Pi Length = 191 Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 66/209 (31%), Gaps = 51/209 (24%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 31 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGL 88 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 89 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 136 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 137 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 162 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAF 246 G S I TS+ T + + I + Sbjct: 163 KNGLSFIETSALDSTNVEAAFQTILTEIY 191 >gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max] Length = 217 Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 75/229 (32%), Gaps = 51/229 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + + +K T+ +E+ R ++ A +W+ G Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFA--TRTLDVDSKVIKAQIWDTAGQ 72 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+++ E ++ L RN + Sbjct: 73 ERYR-----AITSAYYRGAVGALLVYDVTRQATF-ENVDRWLKELRNHTDANIV------ 120 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ V + + A Sbjct: 121 -----------------------------VMLVGNKSDLRHLVA-----VSTEDGKSYAE 146 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA 266 + TS+ T + + + + + K++ + ++PA Sbjct: 147 KESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAVEVAENGTTSVPA 195 >gi|116498990|gb|EAU81885.1| hypothetical protein CC1G_06096 [Coprinopsis cinerea okayama7#130] Length = 209 Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 66/218 (30%), Gaps = 51/218 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKA--QIWDTAGQ 69 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K + L R+ + Sbjct: 70 ERYR-----AITSAYYRGAVGALLVYDIAKHATYVN-VTRWLKELRDHADSNIV------ 117 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + A Sbjct: 118 -----------------------------IMLVGNKSDLKH-----LRAVPTDEAKAFAT 143 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 G S I TS+ + + + I + KS+ Sbjct: 144 ENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLE 181 >gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens] Length = 218 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 76/246 (30%), Gaps = 58/246 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI--STDPSKPLAIPAGSDSLSQIG 275 S I TS+ T + ++ I + K I + +++ I Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDES-----PGNNVVDIS 199 Query: 276 PPVATE 281 P T+ Sbjct: 200 VPPTTD 205 >gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus] Length = 218 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis] Length = 217 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 79/248 (31%), Gaps = 54/248 (21%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K IS D S P ++ I P Sbjct: 145 KNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIS-DRSGHEESPGN--NVVDISLP 201 Query: 278 VATEVDIG 285 T+ G Sbjct: 202 PTTDSQRG 209 >gi|6679583|ref|NP_033023.1| RAB11B, member RAS oncogene family [Mus musculus] gi|1172815|sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B gi|433064|gb|AAC42093.1| Rab11b gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus] gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus] gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus] gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus] gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus] gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus] gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus] gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus] gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus] gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus] gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus] gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus] Length = 218 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|3024528|sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris] Length = 214 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 70/221 (31%), Gaps = 51/221 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GK+ IL RF + +K T+ +E+ T K +W+ G Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K + ++ L R+ + Sbjct: 72 ERYR-----AITSAYYRGAVGALLVYDITKRQTF-DNVQRWLRELRDHADSNIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++ G+K D+ R V + + LA Sbjct: 120 -----------------------------IMMAGNKSDLKH-----LRAVSEEDGQALAE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 G S + TS+ + K+ I + K+++ Sbjct: 146 KEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQE 186 >gi|85082713|ref|XP_956972.1| hypothetical protein ( (NM_017382) RAB11a, member RAS oncogene family [Mus musculus] sp|Q9JLX1|R11A_MOUSE RAS-RELATED PROTEIN RAB-11A gb|AAF36458.1|AF127669_1 (AF127669) small GTPase [Mus musculus] ) [Neurospora crassa OR74A] Length = 214 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 66/214 (30%), Gaps = 51/214 (23%) Query: 42 VFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA--QIWDTAGQE 69 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 IT+ +LV D+SK E + L R+ ++ Sbjct: 70 RYR-----AITSAYYRGAVGALLVYDISKGVTF-ENVNRWLKELRDHADQNIV------- 116 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ R V + + A Sbjct: 117 ----------------------------IMLVGNKSDLRH-----LRAVPTEDAKKFAEE 143 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 S I TS+ T + + I + K Sbjct: 144 NHLSFIETSALDATNVELAFQNILTEIYKIVSTK 177 >gi|1381676|gb|AAB97114.1| small GTP-binding protein [Glycine max] Length = 222 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 51/222 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G A GK+ IL RF + +K T+ +E+ H T K +W+ G Sbjct: 15 KVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKA--QIWDTAGQ 72 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 +T+ +LV D++K + + L RN +K Sbjct: 73 ERYR-----AVTSAYYRGAVGAMLVYDITKRQTF-DHIPRWLEELRNHADKNIV------ 120 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++ G+K D+ +R V + + A Sbjct: 121 -----------------------------IILTGNKCDL-----ENQRDVPTEDAKEFAE 146 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPS 259 G + TS+ T + + + + K+++ D + Sbjct: 147 KEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADEN 188 >gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens] Length = 218 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis] Length = 207 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 73/213 (34%), Gaps = 49/213 (23%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++ + F+G ++ GKT+I+ RF+ + D T + T+ +++ T LW+ Sbjct: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDT 65 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G L+ I + V+V D++ + T + R + Sbjct: 66 AGQERFRSLIPSYIRDSS----VAVIVFDVANRQSFLNTA-RWIEEVRTERGSDVI---- 116 Query: 156 TGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL 215 +++VG+K D+ +KR+V + Sbjct: 117 -------------------------------IVLVGNKTDLV-----DKRQVSIEEGDAK 140 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 A +G I TS+K+ + I G Sbjct: 141 AREFGVMFIETSAKAGFNIKALFRKIAAALPGM 173 >gi|50540176|ref|NP_001002555.1| hypothetical protein LOC436828 [Danio rerio] gi|125808482|ref|XP_001330902.1| PREDICTED: hypothetical protein [Danio rerio] gi|125808488|ref|XP_001336227.1| PREDICTED: hypothetical protein [Danio rerio] gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio] Length = 218 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 75/244 (30%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K G+ ++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIAERSAHDESPGN-NVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|17507543|ref|NP_490675.1| RAB family member (rab-11.1) [Caenorhabditis elegans] gi|2088715|gb|AAB54158.1| Rab family protein 11.1 [Caenorhabditis elegans] Length = 211 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 74/221 (33%), Gaps = 51/221 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ + T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K + +E +E L R+ ++ Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAK-HVTYENVERWLKELRDHADQNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEAKIYAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 S I TS+ T + + + I + + K + TD Sbjct: 145 RNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTDR 185 >gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct] Length = 219 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 43/246 (17%), Positives = 76/246 (30%), Gaps = 58/246 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI--STDPSKPLAIPAGSDSLSQIG 275 S I TS+ T + ++ I + K I + +++ I Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDES-----PGNNVVDIS 199 Query: 276 PPVATE 281 P T+ Sbjct: 200 VPPTTD 205 >gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum] gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba] gi|738937|prf||2001457E GTP-binding protein gi|1098295|prf||2115367C small GTP-binding protein Length = 217 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 75/229 (32%), Gaps = 51/229 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + + +K T+ +E+ R ++ A +W+ G Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFA--TRTLNVDSKVIKAQIWDTAGQ 72 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+++ E ++ L RN + Sbjct: 73 ERYR-----AITSAYYRGAVGALLVYDVTRHATF-ENVDRWLKELRNHTDSNIV------ 120 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ V + + A Sbjct: 121 -----------------------------VMLVGNKADLRHLVA-----VSTEDGKSYAE 146 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA 266 + TS+ T + + + + + K++ + ++PA Sbjct: 147 KESLYFMETSALEATNVENAFAEVLTQIYHIVSKKTVEGAENGNASVPA 195 >gi|14249144|ref|NP_116006.1| RAB11B, member RAS oncogene family [Rattus norvegicus] gi|78369332|ref|NP_001030468.1| RAB11A, member RAS oncogene family [Bos taurus] gi|109123235|ref|XP_001093925.1| PREDICTED: RAB11B, member RAS oncogene family [Macaca mulatta] gi|38258938|sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B (GTP-binding protein YPT3) gi|50403673|sp|O35509|RB11B_RAT Ras-related protein Rab-11B gi|108860922|sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus] gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens] gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus] gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct] gi|75773827|gb|AAI05163.1| RAB11A, member RAS oncogene family [Bos taurus] gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis] gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus] Length = 218 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|118085220|ref|XP_425653.2| PREDICTED: similar to RAB38 [Gallus gallus] Length = 212 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 71/226 (31%), Gaps = 46/226 (20%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GKT+I+ R++ + T+ +++ + LW++ G Sbjct: 12 KLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFA-LKVLSWDAETVVRLQLWDIAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 ++ ++ + +V D+++P E + Sbjct: 71 ERFGNMTRVYYR----EAMGAFIVFDVTRPATF-EAVTKWKEDLD--------------- 110 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 L + PVP +++ +K D D + Sbjct: 111 ----------------SKLVLPNGKPVPTVLLANKCDQGIDVLMNN----GIKMDQFCKE 150 Query: 219 YG-ASLIFTSSKSETTMSKS-RSFINQLA-FGTERPKSISTDPSKP 261 G TS+K ++++ R + + ++ + I TD KP Sbjct: 151 NGFVGWFETSAKENININEASRCLVKHIIATESDPVQPIETDIIKP 196 >gi|71651576|ref|XP_814463.1| small GTP-binding protein RAB6 [Trypanosoma cruzi strain CL Brener] gi|70879437|gb|EAN92612.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi] Length = 268 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 67/219 (30%), Gaps = 49/219 (22%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPK 87 + + +G ++ GKT+++ RF+ D+ + T+ +++ + T Sbjct: 25 ASSSTAAVVKHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRTV- 83 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 H+W+ G L+ I + ++V D++ + T + R + Sbjct: 84 -RLHVWDTAGQERFRSLIPSYIRNSS----GTIVVYDITSRASFLGTF-KWIDEVRAERG 137 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + +VG+K D EKR V Sbjct: 138 DSVV-----------------------------------IFLVGNKLDA-----QEKRVV 157 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 + + A Y + S+K + + + Sbjct: 158 STEEAQKKAEEYNLVFMEVSAKQGKNVKALFRKMAEALP 196 >gi|157344192|emb|CAO69125.1| unnamed protein product [Vitis vinifera] Length = 215 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 75/231 (32%), Gaps = 51/231 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GK+ IL RF + +K T+ +E+ T K +W+ G Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K E ++ L R+ + Sbjct: 72 ERYR-----AITSAYYRGAVGALLVYDITKRQTF-ENVQRWLRELRDHADSNIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++ G+K D+ R V + LA Sbjct: 120 -----------------------------IMMAGNKSDLNH-----LRAVSGDDAQILAE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 G S + TS+ + K+ I + K+++ + + +P G+ Sbjct: 146 KEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASINLPHGT 196 >gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1] gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1] Length = 230 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 67/217 (30%), Gaps = 51/217 (23%) Query: 42 VFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 31 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA--QIWDTAGQE 88 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 IT+ +LV D+SK ++ + L R+ + Sbjct: 89 RYR-----AITSAYYRGAVGALLVYDISKHQT-YDNVNRWLKELRDHADSNIV------- 135 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ R V + A Sbjct: 136 ----------------------------IMLVGNKSDLRH-----LRAVPTDEAKQFASE 162 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 S I TS+ + + + I + K+I Sbjct: 163 NNLSFIETSALDASNVELAFQNILTEIYRIVSSKAII 199 >gi|623584|gb|AAA74116.1| putative Length = 209 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 75/224 (33%), Gaps = 51/224 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G A GK+ +L R+ + +K T+ +E+ K +W+ G Sbjct: 6 KIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKA--QIWDTAGQ 63 Query: 99 ISLSDLVQIPITADNVSFL-SVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 +T+ ++V D+++ +++ L + + A + Sbjct: 64 ERFR-----AVTSAYYRGAFGALVVYDITRRTTF-DSIPRWLDELKTHSDTTVARM---- 113 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +VG+K D+ R V + + LA Sbjct: 114 -------------------------------LVGNKCDL-----DNIRAVSVEEGKSLAE 137 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKP 261 G + TS+ T ++K+ + + + + K +++D K Sbjct: 138 SEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVLNSDSYKA 181 >gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana] Length = 204 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 75/238 (31%), Gaps = 54/238 (22%) Query: 44 FMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQERY 61 Query: 102 SDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR 160 IT+ +LV D++K +E +E L R+ ++ Sbjct: 62 R-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLRELRDHADQNIV--------- 106 Query: 161 SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYG 220 +++VG+K D+ R V + A G Sbjct: 107 --------------------------IMLVGNKSDLRH-----LRAVPTDEAKAFAERNG 135 Query: 221 ASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPV 278 S I TS+ T + + I + K I + L P ++ QI Sbjct: 136 LSFIETSALDSTNVETAFQNILTEIYRIVSQKQIVILQKEILIRP---HNVEQIDVKP 190 >gi|91076508|ref|XP_973251.1| PREDICTED: similar to CG5771-PB, isoform B [Tribolium castaneum] Length = 215 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 71/217 (32%), Gaps = 51/217 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 ITA +LV D++K +E +E L R+ ++ Sbjct: 71 ERYR-----AITAAYYRGAVGALLVYDIAKHLT-YENVERWLRELRDHADQNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V+ + + A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVLTEEAKAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI 254 G S I TS+ T + + I + K I Sbjct: 145 RNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQI 181 >gi|55925277|ref|NP_001007360.1| RAB11a, member RAS oncogene family [Danio rerio] gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio] gi|94733840|emb|CAK10790.1| novel protein (zgc:103679) [Danio rerio] gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio] Length = 215 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 72/230 (31%), Gaps = 52/230 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 G S + TS+ T + + I + K +S D P+ Sbjct: 145 KNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMS-DRRDNDMSPSN 193 >gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa (japonica cultivar-group)] gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa (japonica cultivar-group)] gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa (japonica cultivar-group)] gi|125527190|gb|EAY75304.1| hypothetical protein OsI_003151 [Oryza sativa (indica cultivar-group)] gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_002850 [Oryza sativa (japonica cultivar-group)] Length = 224 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 70/249 (28%), Gaps = 55/249 (22%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF E + T+ +E+ K +W+ G Sbjct: 21 KVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKA--QIWDTAGQ 78 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ ++V D+++ E L R+ + Sbjct: 79 ERYR-----AITSAYYRGAVGALVVYDVTRRITFENA-ERWLKELRDHTDANIV------ 126 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + R A Sbjct: 127 -----------------------------VMLVGNKADLRH-----LRAVPAEDARAFAE 152 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD---SLSQI 274 +G + TS+ T + + + + + ++ P A P G S Sbjct: 153 AHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNALDIG-DDPAAPPRGRTIDVSAKDD 211 Query: 275 GPPVATEVD 283 Sbjct: 212 AVTPVNSSG 220 >gi|147782540|emb|CAN75036.1| hypothetical protein [Vitis vinifera] gi|157341997|emb|CAO63453.1| unnamed protein product [Vitis vinifera] Length = 208 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 73/219 (33%), Gaps = 49/219 (22%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++ + F+G ++ GKT+I+ RF+ + D T + T+ +++ T LW+ Sbjct: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDT 65 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G L+ I + V+V D++ + T + R + Sbjct: 66 AGQERFRSLIPSYIRDSS----VAVIVYDVASRQSFLNT-SKWIEEVRTERGSDVI---- 116 Query: 156 TGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL 215 +++VG+K D+ EKR+V + Sbjct: 117 -------------------------------IVLVGNKTDLV-----EKRQVSIEEGEAK 140 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI 254 A I TS+K+ + I G E S Sbjct: 141 ARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSA 179 >gi|131849|sp|P22129|RB11B_DISOM Ras-related protein Rab-11B (ORA3) gi|213121|gb|AAA49233.1| GTP-binding protein Length = 218 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 47/244 (19%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K IS D S P ++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIS-DRSAHDESPGN--NVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum] gi|738935|prf||2001457C GTP-binding protein Length = 225 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 74/222 (33%), Gaps = 51/222 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G A GK+ IL RF + +K T+ +E+ H T K +W+ G Sbjct: 19 KVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKA--QIWDTAGQ 76 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 +T+ +LV D++K + + L RN +K Sbjct: 77 ERYR-----AVTSAYYRGAVGAMLVYDITKRQTF-DHIPRWLEELRNHADKNIV------ 124 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ +R V + + A Sbjct: 125 -----------------------------IILVGNKSDL-----ENQRDVPTEDAKEFAE 150 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPS 259 G + TS+ T + S + + K+++ D S Sbjct: 151 KEGLFFLETSALQATNVEASFMTVLTEIYNILNKKNLAADES 192 >gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus] Length = 218 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries] Length = 208 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 77/245 (31%), Gaps = 54/245 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 5 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 62 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 63 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 110 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 111 -----------------------------IMLVGNKSDLRH-----FRAVPTDEARAFAE 136 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G S I T + T + + I + K +S + S+++ I P Sbjct: 137 KNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQMSDRRENDMFP---SNNVVPIHVP 193 Query: 278 VATEV 282 TE Sbjct: 194 PTTEN 198 >gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] gi|148234494|ref|NP_001087765.1| MGC84419 protein [Xenopus laevis] gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis] gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] Length = 216 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 79/245 (32%), Gaps = 54/245 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNKIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G S I TS+ T + + I + ++ +D + P+ ++ I P Sbjct: 145 KNGLSFIETSALDSTNVEAAFQTILTEIYRIVS-QTQMSDRRENDMSPSN--NVVPIHVP 201 Query: 278 VATEV 282 TE Sbjct: 202 PTTEN 206 >gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlamydomonas reinhardtii] gi|158284201|gb|EDP09951.1| small rab-related GTPase [Chlamydomonas reinhardtii] Length = 211 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 77/238 (32%), Gaps = 52/238 (21%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++ + F+G ++ GKT+I+ RF+ + D T + T+ +++ T LW+ Sbjct: 10 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDT 67 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G L+ I + V+V D++ + T + R + Sbjct: 68 AGQERFRSLIPSYIRDSS----VAVVVYDITNRQSFLNTA-RWIQEVRTERGNDVI---- 118 Query: 156 TGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL 215 + +VG+K D+ +KR+V + Sbjct: 119 -------------------------------IFLVGNKTDLI-----DKRQVSIEEGDAK 142 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTER---PKSISTDPSKPLAIPAGSDS 270 A + I TS+K+ + I G E K + K DS Sbjct: 143 ARELNVNFIETSAKAGLNIKALFRKIAAALPGMESVTQNKQEQMEEVKLTTSTVTLDS 200 >gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|148237448|ref|NP_001087959.1| hypothetical protein LOC494642 [Xenopus laevis] gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis] gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] Length = 218 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ D S P ++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-DRSAHDESPGN--NVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|82596931|ref|XP_726467.1| hypothetical protein PY00721 [Plasmodium yoelii yoelii str. 17XNL] gi|23481886|gb|EAA18032.1| Rab6 [Plasmodium yoelii yoelii] Length = 282 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 71/231 (30%), Gaps = 53/231 (22%) Query: 32 EDAHFPSQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDI 89 D+ + F+G +A GKT+I+ RF+ D + T+ +++ Sbjct: 80 SDSGLNK-YKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPV--R 136 Query: 90 AHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKV 149 LW+ G L+ I + ++V D++ + T + N+ K Sbjct: 137 LQLWDTAGQERFRSLIPSYIRDS----AAAIVVYDITNRQSFENT-TKWIQDILNERGKD 191 Query: 150 CAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVIC 209 +++VG+K D+ + RKV Sbjct: 192 VI-----------------------------------IVLVGNKTDLA-----DLRKVTY 211 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERP---KSISTD 257 + A Y TS+K+ + I E ++ D Sbjct: 212 EEGMQKAQEYNTMFHETSAKAGHNIKVLFKKIAAKLPNLENNNNHEANVVD 262 >gi|60302752|ref|NP_001012569.1| RAB11B, member RAS oncogene family [Gallus gallus] gi|126323801|ref|XP_001376337.1| PREDICTED: hypothetical protein [Monodelphis domestica] gi|60098771|emb|CAH65216.1| hypothetical protein [Gallus gallus] Length = 218 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ D S P ++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-DRSAHDESPGN--NVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|147802502|emb|CAN73117.1| hypothetical protein [Vitis vinifera] Length = 215 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 75/231 (32%), Gaps = 51/231 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GK+ IL RF + +K T+ +E+ T K +W+ G Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKTVKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K E ++ L R+ + Sbjct: 72 ERYR-----AITSAYYRGAVGALLVYDITKRQTF-ENVQRWLRELRDHADSNIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++ G+K D+ R V + LA Sbjct: 120 -----------------------------IMMAGNKSDLNH-----LRAVSGDDAQILAE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 G S + TS+ + K+ I + K+++ + + +P G+ Sbjct: 146 KEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASINLPHGT 196 >gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3 gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3 gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3 Length = 172 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 66/211 (31%), Gaps = 51/211 (24%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 10 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGL 67 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 68 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 115 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 116 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 141 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 G S I TS+ T + + I + Sbjct: 142 KNGLSFIETSALDSTNVEAAFQTILTEIYRI 172 >gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM 70294] gi|156114012|gb|EDO15545.1| hypothetical protein Kpol_1042p2 [Vanderwaltozyma polyspora DSM 70294] Length = 214 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 41/256 (16%), Positives = 89/256 (34%), Gaps = 55/256 (21%) Query: 31 EEDAHFPSQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKD 88 ++ + F+G + GKT+++ RF+ D+ + T+ +++ T Sbjct: 2 SRPNKSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKT--I 59 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 LW+ G L+ I ++V D++K + + ++ + +N+ + Sbjct: 60 RLQLWDTAGQERFRSLIPSYIRDSR----VAIVVYDITKKKSF-DCIDKWIEDVKNERGE 114 Query: 149 VCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVI 208 V L +VG+K D+ +++R+V Sbjct: 115 ----------------------------------DNVILCVVGNKSDL-----TDERQVS 135 Query: 209 CKTLRFLAHFYGA-SLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + A GA + TS+K+ + I + + +S D ++ Sbjct: 136 TEDGEKKAKELGAKIFMETSTKAGYNVKNLFKKIAKSLPEFQNSESTPLDETE------N 189 Query: 268 SDSLSQIGPPVATEVD 283 SD+ + G T D Sbjct: 190 SDNTKKTGIIDITTND 205 >gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis] Length = 223 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 35/243 (14%), Positives = 76/243 (31%), Gaps = 54/243 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GK+ IL R+ + +K T+ +E+ H + K +W+ G Sbjct: 18 KLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSVKA--QIWDTAGQ 75 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 +T+ +LV D+++ + + L R +K Sbjct: 76 ERYR-----AVTSAYYRGAVGAMLVYDVTRRQTF-DHIPRWLEELRGHADKNIV------ 123 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ ++R + + + A Sbjct: 124 -----------------------------IILVGNKSDL-----EDQRAISTEDAKEFAE 149 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G + TS+ + + + S + F K++ GS + +I Sbjct: 150 TEGLFFLETSALNAVNVETAFSTVLTEIFNIVNKKNLVAGEGNG---DPGSLAGKKIDIV 206 Query: 278 VAT 280 Sbjct: 207 PGP 209 >gi|15233873|ref|NP_193578.1| AtRABA1e (Arabidopsis Rab GTPase homolog A1e); GTP binding [Arabidopsis thaliana] gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis thaliana] gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis thaliana] gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana] gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana] Length = 217 Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 76/230 (33%), Gaps = 52/230 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GK+ +L RF + + +K T+ +E+ + A LW+ G Sbjct: 15 KLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHV--DEKIIKAQLWDTAGQ 72 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+++ E +E L R+ + Sbjct: 73 ERYR-----AITSAYYRGAVGALLVYDITRHITF-ENVERWLKELRDHTDANVV------ 120 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + R + Sbjct: 121 -----------------------------IMLVGNKADLRH-----LRAVPTEEARSFSE 146 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ T + ++ + + + K++ P+++P G Sbjct: 147 RENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALD-GTGDPMSLPKG 195 >gi|145529147|ref|XP_001450362.1| hypothetical protein GSPATT00017322001 [Paramecium tetraurelia strain d4-2] gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia] gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia] gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia] Length = 213 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 70/232 (30%), Gaps = 54/232 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GKT IL RF+ D +KPT+ +E+ + + K +W+ G Sbjct: 14 KIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKSVK--CQIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT + D+++ T E L + + Sbjct: 72 ERYR-----AITNAYYRGAVGAFICYDVTREPTFKNT-EKWLAELKEHADGNIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 ++++G+K D ++R V Sbjct: 120 -----------------------------IIMIGNKTDAV-----DQRAVRTDEASNFCE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAF---GTERPKSISTDPSKPLAIPA 266 I TS+ T + + + I F G++ K + + P+ + Sbjct: 146 QQKIGFIETSALDGTNIDVAFNKIVANIFHTIGSKTAKKVVQVETDPVVLSE 197 >gi|41056251|ref|NP_956417.1| hypothetical protein LOC386994 [Danio rerio] gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio] Length = 216 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 67/215 (31%), Gaps = 51/215 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E E L ++ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENAERWLKELQDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPMDEAKAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 +G S + TS+ + + + I + + Sbjct: 145 KHGLSFLETSALDSSNVELAFQTILTEIYRIVSQR 179 >gi|3024501|sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus] Length = 216 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 51/221 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GK+ IL RF + +K T+ +E+ T K +W+ G Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA--QIWDTAGQ 71 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K + ++ L R+ + Sbjct: 72 ERYR-----AITSAYYRGAVGALLVYDITKRQTF-DNVQRWLRELRDHADSNIV------ 119 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++ G+K D+ R V L+ Sbjct: 120 -----------------------------IMMAGNKSDLNH-----LRAVSEDDGGALSE 145 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 G S + TS+ T + K+ I + K+++ Sbjct: 146 KEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQE 186 >gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family [Xenopus laevis] gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis] Length = 218 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 79/244 (32%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ + +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGVVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ D S P ++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA-DRSAHDESPGN--NVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|115472201|ref|NP_001059699.1| Os07g0496000 [Oryza sativa (japonica cultivar-group)] gi|24059912|dbj|BAC21376.1| GTP-binding protein Rab6 [Oryza sativa (japonica cultivar-group)] gi|113611235|dbj|BAF21613.1| Os07g0496000 [Oryza sativa (japonica cultivar-group)] Length = 208 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 74/219 (33%), Gaps = 49/219 (22%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++ + F+G ++ GKT+I+ RF+ + D T + T+ +++ T LW+ Sbjct: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDT 65 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G L+ I + V+V D++ + T + R + Sbjct: 66 AGQERFRSLIPSYIRDSS----VAVIVFDVASRQSFLNT-SKWIEEVRTERGSDVI---- 116 Query: 156 TGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL 215 +++VG+K D+ +KR+V + Sbjct: 117 -------------------------------IVLVGNKTDLV-----DKRQVSIEEGEGK 140 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI 254 A G I TS+K+ + I G E S Sbjct: 141 AKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSA 179 >gi|15227173|ref|NP_179816.1| AtRABH1d (Arabidopsis Rab GTPase homolog H1d); GTP binding [Arabidopsis thaliana] gi|4567198|gb|AAD23614.1| putative GTP-binding protein [Arabidopsis thaliana] Length = 207 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 74/215 (34%), Gaps = 49/215 (22%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++ + F+G ++ GKT+I+ RF+ + D T + T+ +++ T LW+ Sbjct: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV--RLQLWDT 65 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G L+ I + V+V D++ + T + RN+ Sbjct: 66 AGQERFRSLIPSYIRDSS----VAVVVYDVANRLSFLNT-SKWIEEVRNERAGDVI---- 116 Query: 156 TGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL 215 +++VG+K D+ EKR+V + Sbjct: 117 -------------------------------IVLVGNKTDLV-----EKRQVSIEEGDSK 140 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTER 250 YG I TS+K+ + I G E Sbjct: 141 GREYGVMFIETSAKAGFNIKPLFRKIAAALPGMES 175 >gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae] Length = 221 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 66/215 (30%), Gaps = 51/215 (23%) Query: 43 FFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGIS 100 +G GK+ +L RF + K T+ +E+ T K +W+ G Sbjct: 23 VLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKA--QIWDTAGQER 80 Query: 101 LSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 IT+ +LV D+SK ++ + L R+ + Sbjct: 81 YR-----AITSAYYRGAVGALLVYDISKHQT-YDNVNRWLKELRDHADSNIV-------- 126 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 +++VG+K D+ R V + + A Sbjct: 127 ---------------------------IMLVGNKSDLRH-----LRAVPTEEAKQFASEN 154 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI 254 S I TS+ + + + I + K++ Sbjct: 155 NLSFIETSALDASNVELAFQNILTEIYRIVSSKAL 189 >gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding [Arabidopsis thaliana] gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana] gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana] gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana] Length = 217 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 71/230 (30%), Gaps = 52/230 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + + +K T+ +E+ K +W+ G Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKA--QIWDTAGQ 72 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+++ E +E L R+ + Sbjct: 73 ERYR-----AITSAYYRGAVGALLVYDVTRHVTF-ENVERWLKELRDHTDANIV------ 120 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 ++ VG+K D+ R V + + A Sbjct: 121 -----------------------------IMFVGNKADLRH-----LRAVSTEDAKAFAE 146 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A+P G Sbjct: 147 RENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIG-DDPAALPKG 195 >gi|623586|gb|AAA74117.1| putative Length = 208 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 73/219 (33%), Gaps = 49/219 (22%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++ + F+G ++ GKT+I+ RF+ + D T + T+ +++ T LW+ Sbjct: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV--ALQLWDT 65 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G L+ I + V+V D++ + T + R + Sbjct: 66 AGQERFRSLIPSYIRDSS----VAVIVYDVASRQSFLNT-SKWIEEVRTERGSDVI---- 116 Query: 156 TGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL 215 +++VG+K D+ EKR+V + Sbjct: 117 -------------------------------IVLVGNKTDLV-----EKRQVSIEEAEAK 140 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI 254 A I TS+K+ + I G E S Sbjct: 141 ARELNVMFIETSAKAGFNIKPLFRKIAAALPGMETLSSA 179 >gi|70990240|ref|XP_749969.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293] gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293] Length = 204 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 68/217 (31%), Gaps = 51/217 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 TV +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 5 TVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKA--QIWDTAGQ 62 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+SK ++ + L R+ + Sbjct: 63 ERYR-----AITSAYYRGAVGALLVYDISKHQT-YDNVNRWLKELRDHADSNIV------ 110 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + A Sbjct: 111 -----------------------------IMLVGNKSDLRH-----LRAVPTDEAKQFAS 136 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI 254 S I TS+ + + + I + K++ Sbjct: 137 ENNLSFIETSALDASNVELAFQNILTEIYRIVSSKAL 173 >gi|108706607|gb|ABF94402.1| Ras-related protein Rab-6A, putative, expressed [Oryza sativa (japonica cultivar-group)] Length = 215 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 78/234 (33%), Gaps = 50/234 (21%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++ + F+G +A GKT I+ RF+ + D T + T+ +++ T LW+ Sbjct: 9 AKYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRTV--RLQLWDT 66 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G L+ I + V+V D++ + ++ + Q Sbjct: 67 AGQERFRSLIPSYIRDSS----VAVIVYDVTGKQSFL-SISKWIEEVNTQRGGDVI---- 117 Query: 156 TGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL 215 +++VG+K D+ +KR++ Sbjct: 118 -------------------------------IVLVGNKTDLV-----DKRQISTDEGEAK 141 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI-STDPSKPLAIPAGS 268 A +GA + TS+K+ + I G E S D PA S Sbjct: 142 AQEHGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSSAKQEDMVDINLRPAAS 195 >gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus] Length = 217 Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 76/247 (30%), Gaps = 55/247 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ ++ Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADQNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTD-PSKPLAIPAGSDSLSQIGP 276 S I TS+ T + + I + K I D + P D++ I Sbjct: 145 KNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIRNDTDNDPS---PSGDNVKPISI 201 Query: 277 PVATEVD 283 D Sbjct: 202 APTDSSD 208 >gi|15238392|ref|NP_201330.1| AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding [Arabidopsis thaliana] gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana] gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana] gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana] gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana] Length = 226 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 79/244 (32%), Gaps = 52/244 (21%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G A GK+ IL R+ E +K T+ +E+ H + K +W+ G Sbjct: 19 KVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKA--QIWDTAGQ 76 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 +T+ +LV D+++ + + L R +K Sbjct: 77 ERYR-----AVTSAYYRGAVGAMLVYDITRRQTF-DHIPRWLEELRAHADKNIV------ 124 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 ++++G+K D+ ++R + + + A Sbjct: 125 -----------------------------IILIGNKSDLV-----DQRAIPTEDAKEFAE 150 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 G + TS+ + T + + S + F KS++ GS + +I Sbjct: 151 KEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASE-DQENGNPGSLAGKKIDIV 209 Query: 278 VATE 281 Sbjct: 210 PGPG 213 >gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis] Length = 219 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 69/222 (31%), Gaps = 51/222 (22%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G A GK+ IL RF E +K T+ +E+ H + K +W+ G Sbjct: 12 KVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKA--QIWDTAGQ 69 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 +T+ +LV D++K + + L RN + Sbjct: 70 ERYR-----AVTSAYYRGAVGAMLVYDITKRQTF-DHVPRWLEELRNHADNNIV------ 117 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + + A Sbjct: 118 -----------------------------IMLVGNKCDL-----DNLRAVPTEDAKEFAQ 143 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPS 259 G + TS+ T + + + F KS+ Sbjct: 144 KEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLIASQD 185 >gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens] Length = 218 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSDIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|145357850|ref|NP_196588.3| AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding [Arabidopsis thaliana] gi|8953407|emb|CAB96682.1| GTP-binding protein [Arabidopsis thaliana] Length = 207 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 73/213 (34%), Gaps = 49/213 (23%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++ + F+G ++ GKT+I+ RF+ + D T + T+ +++ T LW+ Sbjct: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTV--RLQLWDT 65 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G L+ I + V+V D++ + T + R + Sbjct: 66 AGQERFRSLIPSYIRDSS----VAVIVYDVANRQSFLNT-SKWIEDVRTERGSDVI---- 116 Query: 156 TGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL 215 +++VG+K D+ +KR+V + Sbjct: 117 -------------------------------IVLVGNKTDLV-----DKRQVSIEEGDNK 140 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 A YG I TS+K+ + I G Sbjct: 141 ARDYGVIFIETSAKAGFNIKPLFRKIAAALPGM 173 >gi|94733945|emb|CAK04342.1| novel protein (zgc:55760) [Danio rerio] Length = 205 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 74/242 (30%), Gaps = 54/242 (22%) Query: 43 FFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGIS 100 +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 2 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQER 59 Query: 101 LSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 IT+ +LV D++K +E +E L R+ + Sbjct: 60 YR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-------- 105 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 +++VG+K D+ R V R A Sbjct: 106 ---------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAEKN 133 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 S I TS+ T + ++ I + K D P ++ I P Sbjct: 134 NLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QMVDRPGHDESPGN--NVVDISVPPT 190 Query: 280 TE 281 T+ Sbjct: 191 TD 192 >gi|72384491|gb|AAZ67607.1| 80A08_22 [Brassica rapa subsp. pekinensis] Length = 206 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 77/222 (34%), Gaps = 49/222 (22%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++ + F+G ++ GKT+I+ RF+ + D T + T+ +++ T LW+ Sbjct: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYMEDRT--LRLQLWDT 65 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G L+ I + V+V D++ + T + R + Sbjct: 66 AGQERFRSLIPSYIRDSS----VAVIVYDVANRQSFLNT-SKWIEDVRTERGSDVI---- 116 Query: 156 TGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL 215 +++VG+K D+ +KR+V + Sbjct: 117 -------------------------------IVLVGNKTDLV-----DKRQVSIEEGDNK 140 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTD 257 A +G I TS+K+ + I+ G + + D Sbjct: 141 ARDFGVIFIETSAKAGFNIKPLFRKISAALPGMDTLSTRQGD 182 >gi|19114161|ref|NP_593249.1| GTPase Ryh1 [Schizosaccharomyces pombe] gi|134131|sp|P17608|RYH1_SCHPO GTP-binding protein ryh1 gi|5077|emb|CAA36715.1| ryh1 [Schizosaccharomyces pombe] gi|2330800|emb|CAB11173.1| GTPase Ryh1 [Schizosaccharomyces pombe] Length = 201 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 79/227 (34%), Gaps = 49/227 (21%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + F+G ++ GKT+++ RF+ + D T + T+ +++ T LW+ G Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 L+ I + ++V D++ N+ T E + R + Sbjct: 71 ERFRSLIPSYIRDSS----VAIIVYDITNHNSFVNT-EKWIEDVRAERGDDVI------- 118 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ +KR+V + A Sbjct: 119 ----------------------------IVLVGNKTDLA-----DKRQVTQEEGEKKAKE 145 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIP 265 + TS+K+ + I Q+ G E ++ ST P Sbjct: 146 LKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVETQSTQMIDVSIQP 192 >gi|147844837|emb|CAN83336.1| hypothetical protein [Vitis vinifera] gi|157344444|emb|CAO69827.1| unnamed protein product [Vitis vinifera] Length = 216 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 77/230 (33%), Gaps = 52/230 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + + + +K T+ +E+ R+ + A +W+ G Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFA--TRSIRVDEKVVKAQIWDTAGQ 72 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+++ E ++ L R+ + Sbjct: 73 ERYR-----AITSAYYRGAVGALLVYDVTRHVTF-ENVDRWLKELRDHTDSSIV------ 120 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + + A Sbjct: 121 -----------------------------IMLVGNKADLGH-----LRAVSTEDAKAYAE 146 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 I TS+ T + + + + + K++ T + +P G Sbjct: 147 KESTFFIETSALESTNVENAFTEVLTQIYHVVSRKALETG-DEAATVPKG 195 >gi|3024504|sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B gi|623578|gb|AAA74113.1| putative Length = 217 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 72/230 (31%), Gaps = 52/230 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + +G GK+ +L RF + +K T+ +E+ K +W+ G Sbjct: 16 KLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKA--QIWDTAGQ 73 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ ++V D+++ E +E L R+ ++ Sbjct: 74 ERYR-----AITSAYYRGAVGALVVYDITRHVTF-ENVERWLKELRDHTDQNIV------ 121 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + + A Sbjct: 122 -----------------------------IMLVGNKADLRH-----LRAVSTEDAKAFAE 147 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A+P G Sbjct: 148 RENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVG-DDPAALPKG 196 >gi|6984166|gb|AAF34783.1|AF228419_1 RAB6 protein [Toxoplasma gondii] Length = 209 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 49/219 (22%) Query: 39 QRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELG 96 + + F+G +A GKT+I+ RF+ D + T+ +++ T LW+ Sbjct: 11 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQATIGIDFLSKTLYLEDRTV--RLQLWDTA 68 Query: 97 GGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 G L+ I + + V+V D++ + T + R + Sbjct: 69 GQERFRSLIPSYIRDSS----AAVVVYDITNRASFLNT-TKWIEDVRAERGNDVI----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 + +VG+K D+ ++R+V + R A Sbjct: 119 ------------------------------ISLVGNKTDLA-----DRRQVSYEEGRQKA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 + + TS+K+ + + G E ++ S Sbjct: 144 QEHDIMFVETSAKAGYNIKNLFRKLASALPGLETQQTAS 182 >gi|156542630|ref|XP_001604718.1| PREDICTED: similar to rab6 [Nasonia vitripennis] Length = 246 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 55/223 (24%) Query: 41 TVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 + F+G ++ GKT+++ RF+ D T + T+ +++ T LW+ G Sbjct: 52 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDTAGQ 109 Query: 99 ISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 L+ I V+V D++ N+ + R + + Sbjct: 110 ERFRSLIPSYIRDS----TVAVVVYDITNANSF-HQTSKWIDDVRTERGSDVIIM----- 159 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +VG+K D+ S+KR+V + A Sbjct: 160 ------------------------------LVGNKTDL-----SDKRQVSTEEGERKAKE 184 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKP 261 I TS+K+ + + + G + +KP Sbjct: 185 LNVMFIETSAKAGYNVKQLFRRVAAALPGMDST------ENKP 221 >gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase Length = 199 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 7 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 64 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 65 ERYRR-----ITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 112 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 113 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 138 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 139 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 195 Query: 278 VATE 281 T+ Sbjct: 196 PTTD 199 >gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis] gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis] Length = 218 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 68/217 (31%), Gaps = 51/217 (23%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEAKAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI 254 G S I TS+ T + + I + K I Sbjct: 145 KNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQI 181 >gi|15224916|ref|NP_181989.1| RAB6; GTP binding [Arabidopsis thaliana] gi|3341681|gb|AAC27463.1| putative small GTP-binding protein [Arabidopsis thaliana] gi|21593488|gb|AAM65455.1| putative small GTP-binding protein [Arabidopsis thaliana] gi|107738267|gb|ABF83670.1| At2g44610 [Arabidopsis thaliana] gi|110742258|dbj|BAE99055.1| putative small GTP-binding protein [Arabidopsis thaliana] gi|741994|prf||2008312A GTP-binding protein Length = 208 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 49/213 (23%) Query: 38 SQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 ++ + F+G ++ GKT+I+ RF+ + D T + T+ +++ T LW+ Sbjct: 8 AKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTV--RLQLWDT 65 Query: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQK 155 G L+ I + V+V D++ + T + R + Sbjct: 66 AGQERFRSLIPSYIRDSS----VAVIVYDVASRQSFLNT-TKWIDEVRTERGSDVI---- 116 Query: 156 TGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFL 215 +++VG+K D+ +KR+V + Sbjct: 117 -------------------------------VVLVGNKTDLV-----DKRQVSIEEAEAK 140 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 A I TS+K+ + I G Sbjct: 141 ARELNVMFIETSAKAGFNIKALFRKIAAALPGM 173 >gi|134118235|ref|XP_772218.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254827|gb|EAL17571.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var. neoformans B-3501A] Length = 213 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 79/238 (33%), Gaps = 49/238 (20%) Query: 31 EEDAHFPSQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKD 88 + + + F+G ++ GKT+++ RF+ D T + T+ +++ T Sbjct: 13 SSASTPLKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRTV-- 70 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 LW+ G L+ I + V+V D++ + T + RN+ + Sbjct: 71 RLQLWDTAGQERFRSLIPSYIRDSS----VAVIVYDITNRTSFQNT-SKWVDDVRNERGQ 125 Query: 149 VCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVI 208 +++VG+K D+ ++KR+V Sbjct: 126 DVI-----------------------------------IVLVGNKTDL-----NDKRQVT 145 Query: 209 CKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA 266 + L A G I TS+K+ + I G K T + P Sbjct: 146 PEDLDKRAKELGVMSIETSAKAGHNVKTLFKKIAMALPGGSEAKDNGTTKIDVSSSPQ 203 >gi|4758986|ref|NP_004209.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens] Length = 218 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 78/244 (31%), Gaps = 54/244 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQ 70 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D++K +E +E L R+ + Sbjct: 71 ERYRR-----ITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 Searching..................................................done Results from round 4 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light inter... 381 e-104 gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermed... 379 e-103 gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain is... 379 e-103 gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain i... 378 e-103 gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein... 376 e-102 gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 ligh... 376 e-102 gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light int... 375 e-102 gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermed... 373 e-101 gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] 373 e-101 gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein... 366 e-100 gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Dan... 362 3e-98 gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 lig... 360 9e-98 gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 ... 355 2e-96 gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermed... 351 5e-95 gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chai... 348 3e-94 gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] 341 4e-92 gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] 329 2e-88 gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [S... 324 7e-87 gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella... 316 1e-84 gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermed... 306 1e-81 gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin li... 305 3e-81 gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermedi... 305 3e-81 gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibencla... 304 6e-81 gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A is... 302 2e-80 gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo s... 302 2e-80 gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light ... 302 3e-80 gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo s... 301 4e-80 gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermed... 301 5e-80 gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon n... 301 6e-80 gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light interme... 301 7e-80 gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein li... 300 8e-80 gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermed... 300 8e-80 gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 ... 299 3e-79 gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light interme... 298 3e-79 gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light int... 297 5e-79 gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-interm... 297 9e-79 gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [D... 296 1e-78 gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 ... 296 2e-78 gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light... 296 2e-78 gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculu... 295 3e-78 gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light int... 294 5e-78 gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light inte... 294 5e-78 gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermed... 294 6e-78 gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light ... 294 7e-78 gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] 294 9e-78 gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermed... 293 1e-77 gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermedi... 293 1e-77 gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light int... 292 3e-77 gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-interm... 291 4e-77 gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] 290 1e-76 gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light inter... 289 3e-76 gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light ... 286 2e-75 gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light inte... 283 1e-74 gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] 283 1e-74 gi|157119433|ref|XP_001653379.1| conserved hypothetical protein ... 281 4e-74 gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] 280 8e-74 gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon n... 280 1e-73 gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate ... 279 3e-73 gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] 278 4e-73 gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light inte... 278 4e-73 gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic,... 275 3e-72 gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae s... 273 1e-71 gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A... 271 5e-71 gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin li... 267 1e-69 gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein... 266 2e-69 gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon n... 265 4e-69 gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Tr... 264 7e-69 gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein li... 264 9e-69 gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [G... 264 1e-68 gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosoph... 262 3e-68 gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoob... 255 4e-66 gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, is... 253 2e-65 gi|157128066|ref|XP_001661298.1| dynein light intermediate chain... 252 4e-65 gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melano... 250 1e-64 gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated fa... 249 2e-64 gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938... 248 4e-64 gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] 245 4e-63 gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] 244 7e-63 gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella... 243 1e-62 gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae s... 242 2e-62 gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 ligh... 241 5e-62 gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [... 241 6e-62 gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00... 240 8e-62 gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chai... 238 5e-61 gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermed... 236 2e-60 gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Tr... 236 2e-60 gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermedi... 234 6e-60 gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [S... 234 9e-60 gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermedia... 230 2e-58 gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoob... 228 4e-58 gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermedi... 227 1e-57 gi|146097038|ref|XP_001468017.1| dynein light intermediate chain... 223 1e-56 gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00... 223 1e-56 gi|114675154|ref|XP_001147785.1| PREDICTED: similar to GTP-bindi... 220 1e-55 gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_002... 220 1e-55 gi|73987203|ref|XP_854399.1| PREDICTED: similar to RAB11B, membe... 218 5e-55 gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, m... 216 2e-54 gi|157874331|ref|XP_001685649.1| dynein light intermediate chain... 215 3e-54 gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 ... 215 3e-54 gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] 214 8e-54 gi|149426497|ref|XP_001518037.1| PREDICTED: similar to rab11, pa... 213 1e-53 gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malas... 213 2e-53 gi|149692307|ref|XP_001496560.1| PREDICTED: similar to rab11 [Eq... 213 2e-53 gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon n... 213 2e-53 gi|6679583|ref|NP_033023.1| RAB11B, member RAS oncogene family [... 213 2e-53 gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens] 212 2e-53 gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Dan... 212 2e-53 gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus] 212 3e-53 gi|14249144|ref|NP_116006.1| RAB11B, member RAS oncogene family ... 212 3e-53 gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus] 212 4e-53 gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus] 211 5e-53 gi|131849|sp|P22129|RB11B_DISOM Ras-related protein Rab-11B (ORA... 211 6e-53 gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos] 211 7e-53 gi|94733945|emb|CAK04342.1| novel protein (zgc:55760) [Danio rerio] 210 9e-53 gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens] 210 9e-53 gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [H... 210 9e-53 gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene fami... 210 1e-52 gi|60302752|ref|NP_001012569.1| RAB11B, member RAS oncogene fami... 210 1e-52 gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human R... 210 1e-52 gi|4758986|ref|NP_004209.1| RAB11B, member RAS oncogene family [... 210 1e-52 gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncog... 210 1e-52 gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon n... 210 1e-52 gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens] 210 1e-52 gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [sy... 210 1e-52 gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vini... 210 1e-52 gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene fam... 210 2e-52 gi|4758984|ref|NP_004654.1| Ras-related protein Rab-11A [Homo sa... 210 2e-52 gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] 210 2e-52 gi|84000297|ref|NP_001033251.1| hypothetical protein LOC534708 [... 209 2e-52 gi|57524801|ref|NP_001005827.1| Ras-related protein Rab-11A [Gal... 209 2e-52 gi|50540176|ref|NP_001002555.1| hypothetical protein LOC436828 [... 209 3e-52 gi|154343515|ref|XP_001567703.1| dynein light intermediate chain... 209 3e-52 gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ust... 208 3e-52 gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light interme... 208 6e-52 gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097... 208 6e-52 gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis] >gnl|BL_O... 208 6e-52 gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cry... 207 8e-52 gi|3024500|sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A >gnl... 207 8e-52 gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella... 207 1e-51 gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346... 207 1e-51 gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries] 207 1e-51 gi|148236881|ref|NP_001088852.1| hypothetical protein LOC496163 ... 206 2e-51 gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon n... 206 2e-51 gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlam... 206 2e-51 gi|52345666|ref|NP_001004880.1| MGC88884 protein [Xenopus tropic... 206 2e-51 gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene fami... 205 5e-51 gi|55925277|ref|NP_001007360.1| RAB11a, member RAS oncogene fami... 205 5e-51 gi|1381676|gb|AAB97114.1| small GTP-binding protein [Glycine max] 205 6e-51 gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella] 204 7e-51 gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa] 204 7e-51 gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light int... 204 7e-51 gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus] 204 9e-51 gi|116498990|gb|EAU81885.1| hypothetical protein CC1G_06096 [Cop... 203 2e-50 gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150... 203 2e-50 gi|15233873|ref|NP_193578.1| AtRABA1e (Arabidopsis Rab GTPase ho... 203 2e-50 gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon n... 203 2e-50 gi|147811153|emb|CAN70163.1| hypothetical protein [Vitis vinifer... 203 2e-50 gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekine... 202 2e-50 gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana] 202 3e-50 gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HO... 202 3e-50 gi|157344192|emb|CAO69125.1| unnamed protein product [Vitis vini... 202 3e-50 gi|91076508|ref|XP_973251.1| PREDICTED: similar to CG5771-PB, is... 202 3e-50 gi|3024501|sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C >gnl... 202 3e-50 gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis] 202 3e-50 gi|109940137|sp|P25766|RGP1_ORYSJ Ras-related protein RGP1 (GTP-... 202 3e-50 gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa (jap... 202 3e-50 gi|3024528|sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV >gnl... 202 4e-50 gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus... 202 4e-50 gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus] 202 4e-50 gi|125951003|ref|XP_001345672.1| PREDICTED: hypothetical protein... 202 4e-50 gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putativ... 202 4e-50 gi|41056251|ref|NP_956417.1| hypothetical protein LOC386994 [Dan... 202 5e-50 gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus] >gnl|BL... 202 5e-50 gi|15238392|ref|NP_201330.1| AtRABA4a (Arabidopsis Rab GTPase ho... 201 5e-50 gi|15230422|ref|NP_187823.1| AtRABA4d (Arabidopsis Rab GTPase ho... 201 5e-50 gi|3024504|sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B >gnl... 201 5e-50 gi|66513627|ref|XP_623997.1| PREDICTED: similar to Rab-protein 1... 201 6e-50 gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti] >gnl|BL_O... 201 7e-50 gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interact... 201 7e-50 gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Pha... 201 7e-50 gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus] 200 9e-50 gi|147834751|emb|CAN75016.1| hypothetical protein [Vitis vinifer... 200 9e-50 gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase 200 1e-49 gi|156551916|ref|XP_001607057.1| PREDICTED: similar to putative ... 200 1e-49 gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] 200 1e-49 gi|5902803|sp|P28188|ARA5_ARATH Ras-related protein ARA-5 >gnl|B... 200 1e-49 gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypi... 200 1e-49 gi|147789804|emb|CAN62934.1| hypothetical protein [Vitis vinifer... 200 1e-49 gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa (jap... 200 1e-49 gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase ho... 200 1e-49 gi|147802502|emb|CAN73117.1| hypothetical protein [Vitis vinifera] 200 1e-49 gi|50292391|ref|XP_448628.1| unnamed protein product [Candida gl... 200 2e-49 gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum] >g... 200 2e-49 gi|157358689|emb|CAO66374.1| unnamed protein product [Vitis vini... 200 2e-49 gi|17507543|ref|NP_490675.1| RAB family member (rab-11.1) [Caeno... 200 2e-49 gi|85002141|gb|ABC68472.1| Rab6A [Marsupenaeus japonicus] 199 2e-49 gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca coagulata] 199 2e-49 gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max] 199 2e-49 gi|125552993|gb|EAY98702.1| hypothetical protein OsI_019935 [Ory... 199 3e-49 gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G P... 198 3e-49 gi|70990240|ref|XP_749969.1| Ras GTPase Rab11, putative [Aspergi... 198 3e-49 gi|145229443|ref|XP_001389030.1| hypothetical protein An01g06060... 198 3e-49 gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neo... 198 4e-49 gi|15222396|ref|NP_172221.1| AtRABA2b (Arabidopsis Rab GTPase ho... 198 4e-49 gi|157354705|emb|CAO48023.1| unnamed protein product [Vitis vini... 198 4e-49 gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa] 198 4e-49 gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum] >g... 198 4e-49 gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa (jap... 198 4e-49 gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Asp... 198 4e-49 gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 ... 198 5e-49 gi|115478587|ref|NP_001062887.1| Os09g0327100 [Oryza sativa (jap... 198 5e-49 gi|3024505|sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D >gnl... 198 5e-49 gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces po... 198 6e-49 gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa (jap... 198 6e-49 gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana ... 198 7e-49 gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270... 197 7e-49 gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa] 197 7e-49 gi|267527|sp|Q01111|YPT3_NICPL Ras-related protein YPT3 >gnl|BL_... 197 7e-49 gi|147844837|emb|CAN83336.1| hypothetical protein [Vitis vinifer... 197 9e-49 gi|157328625|emb|CAO22323.1| unnamed protein product [Vitis vini... 197 9e-49 gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza... 197 1e-48 gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (jap... 197 1e-48 gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding pr... 197 1e-48 gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis] >gnl|BL_O... 197 1e-48 gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana] 197 1e-48 gi|125605011|gb|EAZ44047.1| hypothetical protein OsJ_027530 [Ory... 197 1e-48 gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japo... 197 1e-48 gi|15219955|ref|NP_173136.1| RAB11 (ARABIDOPSIS RAB GTPASE HOMOL... 197 1e-48 gi|15218719|ref|NP_174177.1| AtRABA1i (Arabidopsis Rab GTPase ho... 197 1e-48 gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa (jap... 197 1e-48 gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein ... 197 1e-48 gi|17137216|ref|NP_477170.1| Rab-protein 11 CG5771-PB, isoform B... 197 1e-48 gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypi... 197 1e-48 gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa (jap... 197 1e-48 gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein... 196 2e-48 gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum] 196 2e-48 gi|3024502|sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D >gnl... 196 2e-48 gi|42543204|pdb|1OIW|A Chain A, X-Ray Structure Of The Small G P... 196 2e-48 gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis] 196 2e-48 gi|15237828|ref|NP_200723.1| AtRABA2d (Arabidopsis Rab GTPase ho... 196 2e-48 gi|157745909|ref|XP_001668051.1| Hypothetical protein CBG03904 [... 196 2e-48 gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza ... 196 2e-48 gi|15234020|ref|NP_193615.1| AtRABA1d/AtRab11B/AthSGBP (Arabidop... 196 2e-48 gi|85082713|ref|XP_956972.1| hypothetical protein ( (NM_017382) ... 195 3e-48 gi|3024503|sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C >gnl... 195 3e-48 gi|157338312|emb|CAO39356.1| unnamed protein product [Vitis vini... 195 3e-48 gi|15236099|ref|NP_195709.1| ATGB3 (GTP-BINDING PROTEIN 3); GTP ... 195 4e-48 gi|3024529|sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E >gnl... 195 5e-48 gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum] >g... 195 5e-48 gi|45191035|ref|NP_985289.1| AER434Cp [Ashbya gossypii ATCC 1089... 195 5e-48 gi|147777473|emb|CAN62732.1| hypothetical protein [Vitis vinifer... 195 5e-48 gi|15232477|ref|NP_188124.1| AtRABA1g (Arabidopsis Rab GTPase ho... 195 5e-48 gi|157327287|emb|CAO15080.1| unnamed protein product [Vitis vini... 195 6e-48 gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa (jap... 195 6e-48 gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum] >g... 194 6e-48 gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans] 194 6e-48 gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gib... 194 6e-48 gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa] 194 6e-48 gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa (jap... 194 7e-48 gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa (jap... 194 7e-48 gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster] 194 8e-48 gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound ... 194 8e-48 gi|157341762|emb|CAO62317.1| unnamed protein product [Vitis vini... 194 8e-48 gi|50285709|ref|XP_445283.1| unnamed protein product [Candida gl... 194 8e-48 gi|1053063|gb|AAA80678.1| small GTP-binding protein 193 1e-47 gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis ... 193 1e-47 gi|6320869|ref|NP_010948.1| GTPase of the Ypt/Rab family, very s... 193 1e-47 gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aes... 193 1e-47 gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis] 193 1e-47 gi|1370164|emb|CAA98159.1| RAB1B [Lotus japonicus] 193 1e-47 gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein... 193 1e-47 gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula] 193 1e-47 gi|115447653|ref|NP_001047606.1| Os02g0653800 [Oryza sativa (jap... 193 1e-47 gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa (jap... 193 2e-47 gi|15242483|ref|NP_199387.1| AtRABA1c (Arabidopsis Rab GTPase ho... 193 2e-47 gi|121713178|ref|XP_001274200.1| dynein light intermediate chain... 193 2e-47 gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus] 193 2e-47 gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa] 193 2e-47 gi|15217622|ref|NP_171715.1| ATRAB1B (Arabidopsis thaliana respo... 193 2e-47 gi|15232652|ref|NP_190267.1| AtRABA2c/AtRab11A (Arabidopsis Rab ... 193 2e-47 gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japo... 192 2e-47 gi|147788245|emb|CAN75965.1| hypothetical protein [Vitis vinifera] 192 2e-47 gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p1... 192 2e-47 gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza ... 192 3e-47 gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis] 192 3e-47 gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum] >g... 192 3e-47 gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum] 192 3e-47 gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japo... 192 3e-47 gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa (jap... 192 3e-47 gi|217841|dbj|BAA00832.1| small GTP-binding protein [Arabidopsis... 192 3e-47 gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicot... 192 4e-47 gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta v... 192 5e-47 gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab1... 191 5e-47 gi|156542630|ref|XP_001604718.1| PREDICTED: similar to rab6 [Nas... 191 6e-47 gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum] >g... 191 8e-47 gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In C... 191 8e-47 gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabido... 191 8e-47 gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosoph... 191 8e-47 gi|466172|sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 >gnl|B... 191 8e-47 gi|147834571|emb|CAN69655.1| hypothetical protein [Vitis vinifer... 191 8e-47 gi|158292354|ref|XP_313857.2| AGAP004559-PD [Anopheles gambiae s... 190 9e-47 gi|145610591|ref|XP_368165.2| hypothetical protein MGG_01079 [Ma... 190 9e-47 gi|72180728|ref|XP_798729.1| PREDICTED: similar to Rab11b [Stron... 190 1e-46 gi|623584|gb|AAA74116.1| putative 190 1e-46 gi|125546399|gb|EAY92538.1| hypothetical protein OsI_013771 [Ory... 190 1e-46 gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa (jap... 190 1e-46 gi|6321228|ref|NP_011305.1| GTPase of the Ypt/Rab family, very s... 190 1e-46 gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Sol... 190 1e-46 gi|119479611|ref|XP_001259834.1| conserved hypothetical protein ... 190 1e-46 gi|15221477|ref|NP_172128.1| ARA2 (Arabidopsis Rab GTPase homolo... 190 2e-46 gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneif... 190 2e-46 gi|15225121|ref|NP_180726.1| AtRABA5d (Arabidopsis Rab GTPase ho... 190 2e-46 gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thali... 190 2e-46 gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlam... 190 2e-46 gi|15226182|ref|NP_180943.1| ArRABA1h (Arabidopsis Rab GTPase ho... 190 2e-46 gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis] 190 2e-46 gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa] 189 2e-46 gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii] 189 2e-46 gi|19114161|ref|NP_593249.1| GTPase Ryh1 [Schizosaccharomyces po... 189 2e-46 gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max] 189 3e-46 gi|82596931|ref|XP_726467.1| hypothetical protein PY00721 [Plasm... 189 3e-46 gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-li... 189 3e-46 gi|157349142|emb|CAO24288.1| unnamed protein product [Vitis vini... 189 3e-46 gi|158297778|ref|XP_001238010.2| AGAP011363-PA [Anopheles gambia... 188 4e-46 gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspe... 188 4e-46 gi|157112176|ref|XP_001657425.1| rab6 [Aedes aegypti] >gnl|BL_OR... 188 4e-46 gi|17137220|ref|NP_477172.1| Rab-protein 6 CG6601-PA [Drosophila... 188 5e-46 gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlam... 188 5e-46 gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum] >g... 188 5e-46 gi|125559285|gb|EAZ04821.1| hypothetical protein OsI_026053 [Ory... 188 5e-46 gi|91094319|ref|XP_972453.1| PREDICTED: similar to CG6601-PA [Tr... 188 5e-46 gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ust... 188 5e-46 gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus... 188 6e-46 gi|42561732|ref|NP_563750.2| ARA/Ara-1/AtRABA5e/AtRab11D (Arabid... 188 6e-46 gi|157112172|ref|XP_001657423.1| rab6 [Aedes aegypti] >gnl|BL_OR... 188 6e-46 gi|464524|sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A >gnl|... 187 8e-46 gi|157775947|ref|XP_001666039.1| Hypothetical protein CBG06854 [... 187 8e-46 gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis] 187 8e-46 gi|114052691|ref|NP_001040270.1| ras small monomeric GTPase Rab6... 187 8e-46 gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lema... 187 9e-46 gi|125808502|ref|XP_692506.2| PREDICTED: similar to Rab11b prote... 187 1e-45 gi|50412303|ref|XP_457123.1| hypothetical protein DEHA0B03608g [... 187 1e-45 gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis] 187 1e-45 gi|3024506|sp|Q40523|RB11A_TOBAC Ras-related protein Rab11A >gnl... 187 1e-45 gi|125558411|gb|EAZ03947.1| hypothetical protein OsI_025179 [Ory... 187 1e-45 gi|15238852|ref|NP_199607.1| SMG1 (SMALL MOLECULAR WEIGHT G-PROT... 187 1e-45 gi|125562255|gb|EAZ07703.1| hypothetical protein OsI_028935 [Ory... 187 1e-45 gi|108706608|gb|ABF94403.1| Ras-related protein Rab-6A, putative... 187 1e-45 gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus... 187 1e-45 gi|126138088|ref|XP_001385567.1| predicted protein [Pichia stipi... 187 1e-45 gi|145251179|ref|XP_001397103.1| hypothetical protein An15g05740... 187 1e-45 gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus] 187 1e-45 gi|78057535|gb|ABB17267.1| secretion related GTPase C [Aspergill... 187 1e-45 gi|56693355|ref|NP_001008641.1| RAB25, member RAS oncogene famil... 186 2e-45 gi|71002422|ref|XP_755892.1| RAS small monomeric GTPase Rab6, pu... 186 2e-45 gi|147782540|emb|CAN75036.1| hypothetical protein [Vitis vinifer... 186 2e-45 gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [C... 186 2e-45 gi|17553774|ref|NP_498993.1| RAB family member (rab-6.1) [Caenor... 186 2e-45 gi|13195674|ref|NP_077249.1| RAB6A, member RAS oncogene family [... 186 2e-45 gi|48096836|ref|XP_392533.1| PREDICTED: similar to Rab-protein 6... 186 2e-45 gi|125604071|gb|EAZ43396.1| hypothetical protein OsJ_026879 [Ory... 186 2e-45 gi|145607295|ref|XP_361669.2| RAS small monomeric GTPase Rab6 [M... 186 2e-45 gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus] 186 2e-45 gi|15231462|ref|NP_187397.1| AtRABA5b (Arabidopsis Rab GTPase ho... 186 2e-45 gi|17570073|ref|NP_510790.1| RAB family member (rab-6.2) [Caenor... 186 2e-45 gi|83770344|dbj|BAE60477.1| unnamed protein product [Aspergillus... 186 3e-45 gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, put... 186 3e-45 gi|56757031|gb|AAW26687.1| SJCHGC02776 protein [Schistosoma japo... 185 3e-45 gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis] 185 3e-45 gi|47228262|emb|CAG07657.1| unnamed protein product [Tetraodon n... 185 3e-45 gi|157767730|ref|XP_001667345.1| Hypothetical protein CBG15944 [... 185 3e-45 gi|109459131|ref|XP_001062702.1| PREDICTED: similar to RAB6A, me... 185 4e-45 gi|125844561|ref|XP_001331029.1| PREDICTED: hypothetical protein... 185 4e-45 gi|126327867|ref|XP_001363218.1| PREDICTED: similar to Rab6 prot... 185 4e-45 gi|15224916|ref|NP_181989.1| RAB6; GTP binding [Arabidopsis thal... 185 4e-45 gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa (jap... 185 4e-45 gi|119907597|ref|XP_001252030.1| PREDICTED: similar to Rab6 prot... 185 4e-45 gi|38679888|ref|NP_942599.1| RAB6A, member RAS oncogene family i... 185 5e-45 gi|73987984|ref|XP_850271.1| PREDICTED: similar to RAB6A, member... 185 5e-45 gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus N... 185 6e-45 gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norv... 184 6e-45 gi|125828213|ref|XP_001331974.1| PREDICTED: similar to RAB6, mem... 184 6e-45 gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha gr... 184 7e-45 gi|83751822|gb|ABC42924.1| GTP-binding protein [Anas platyrhynchos] 184 7e-45 gi|50550715|ref|XP_502830.1| hypothetical protein [Yarrowia lipo... 184 7e-45 gi|126327865|ref|XP_001363135.1| PREDICTED: similar to Rab6 prot... 184 8e-45 gi|48766845|gb|AAT46563.1| Rab [Marsupenaeus japonicus] 184 8e-45 gi|109107885|ref|XP_001115437.1| PREDICTED: similar to RAB6A, me... 184 8e-45 gi|47222578|emb|CAG02943.1| unnamed protein product [Tetraodon n... 184 8e-45 gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptospor... 184 8e-45 gi|157344707|emb|CAO70462.1| unnamed protein product [Vitis vini... 184 9e-45 gi|15227173|ref|NP_179816.1| AtRABH1d (Arabidopsis Rab GTPase ho... 184 9e-45 gi|15236081|ref|NP_195699.1| AtRABH1c (Arabidopsis Rab GTPase ho... 184 9e-45 gi|108706607|gb|ABF94402.1| Ras-related protein Rab-6A, putative... 184 9e-45 gi|71651576|ref|XP_814463.1| small GTP-binding protein RAB6 [Try... 184 9e-45 gi|19923231|ref|NP_002860.2| RAB6A, member RAS oncogene family i... 184 1e-44 gi|6984166|gb|AAF34783.1|AF228419_1 RAB6 protein [Toxoplasma gon... 183 1e-44 gi|109105440|ref|XP_001118047.1| PREDICTED: similar to RAB1B, me... 183 1e-44 gi|51480434|gb|AAH80215.1| Rab6b protein [Danio rerio] 183 1e-44 gi|149725600|ref|XP_001491236.1| PREDICTED: hypothetical protein... 183 1e-44 gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10... 183 1e-44 gi|126645710|ref|XP_001388049.1| Rab11, putative [Cryptosporidiu... 183 1e-44 gi|114638536|ref|XP_001150399.1| PREDICTED: similar to RAB1B, me... 183 1e-44 gi|147903483|ref|NP_001080506.1| RAB6A, member RAS oncogene fami... 183 1e-44 gi|159102818|gb|EDP41716.1| hypothetical protein MGL_3924 [Malas... 183 1e-44 gi|113206062|ref|NP_001038105.1| RAB6A, member RAS oncogene fami... 183 1e-44 gi|115472201|ref|NP_001059699.1| Os07g0496000 [Oryza sativa (jap... 183 1e-44 gi|450635|gb|AAA50159.1| GTP binding protein 183 1e-44 gi|148227273|ref|NP_001090835.1| RAB6B, member RAS oncogene fami... 183 1e-44 gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11... 183 1e-44 gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis] 183 1e-44 gi|62898834|dbj|BAD97271.1| RAB6A, member RAS oncogene family is... 183 1e-44 gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa (jap... 183 1e-44 gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lema... 183 2e-44 gi|157343673|emb|CAO68179.1| unnamed protein product [Vitis vini... 183 2e-44 gi|623586|gb|AAA74117.1| putative 183 2e-44 gi|68491615|ref|XP_710395.1| putative rab family GTP-binding pro... 183 2e-44 gi|289370|gb|AAA68983.1| small GTP-binding protein 183 2e-44 gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus] 183 2e-44 gi|68402952|ref|XP_695291.1| PREDICTED: similar to Rab1-prov pro... 183 2e-44 gi|114085|sp|P19892|ARA1_ARATH Ras-related protein ARA-1 >gnl|BL... 183 2e-44 gi|157766202|ref|XP_001675444.1| Hypothetical protein CBG18559 [... 183 2e-44 gi|77681452|ref|NP_001029351.1| RAB6B, member RAS oncogene famil... 183 2e-44 gi|145357850|ref|NP_196588.3| AtRABH1e (Arabidopsis Rab GTPase h... 183 2e-44 gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum an... 183 2e-44 gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum] >g... 183 2e-44 gi|45361477|ref|NP_989315.1| RAB6A, member RAS oncogene family [... 183 2e-44 gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, puta... 183 2e-44 gi|125836149|ref|XP_001339908.1| PREDICTED: hypothetical protein... 183 2e-44 gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis] 183 2e-44 gi|114576516|ref|XP_001149988.1| PREDICTED: similar to Rab10 iso... 182 2e-44 gi|147899039|ref|NP_001089868.1| hypothetical protein LOC734934 ... 182 2e-44 gi|114577812|ref|XP_530454.2| PREDICTED: hypothetical protein [P... 182 2e-44 gi|1053067|gb|AAA80680.1| small GTP-binding protein 182 2e-44 gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p... 182 3e-44 gi|131785|sp|P22125|RAB1_DISOM Ras-related protein ORAB-1 >gnl|B... 182 3e-44 gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica] 182 3e-44 gi|148233560|ref|NP_001086132.1| MGC83971 protein [Xenopus laevi... 182 3e-44 gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max] 182 3e-44 gi|15224226|ref|NP_181842.1| ARA4 (Arabidopsis Rab GTPase homolo... 182 3e-44 gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene famil... 182 3e-44 gi|56757515|gb|AAW26922.1| SJCHGC02777 protein [Schistosoma japo... 182 4e-44 gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella... 182 4e-44 gi|30424655|ref|NP_776142.1| RAB6B, member RAS oncogene family [... 181 4e-44 gi|47225306|emb|CAG09806.1| unnamed protein product [Tetraodon n... 181 4e-44 gi|73535740|pdb|1YZQ|A Chain A, Gppnhp-Bound Rab6 Gtpase 181 4e-44 gi|115398722|ref|XP_001214950.1| conserved hypothetical protein ... 181 4e-44 gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene famil... 181 4e-44 gi|61806504|ref|NP_001013485.1| hypothetical protein LOC541339 [... 181 4e-44 gi|123417386|ref|XP_001305092.1| GTP-binding protein YPTM2, puta... 181 5e-44 gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa (jap... 181 5e-44 gi|145349021|ref|XP_001418939.1| predicted protein [Ostreococcus... 181 5e-44 gi|147902449|ref|NP_001086223.1| MGC84182 protein [Xenopus laevi... 181 5e-44 gi|160704321|gb|EAT78701.2| hypothetical protein SNOG_14076 [Pha... 181 5e-44 gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, i... 181 6e-44 gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideu... 181 6e-44 gi|156717362|ref|NP_001096221.1| hypothetical protein LOC1001247... 181 6e-44 gi|156538473|ref|XP_001606644.1| PREDICTED: similar to ras-relat... 181 7e-44 gi|149640905|ref|XP_001513393.1| PREDICTED: similar to RAB1A, me... 181 7e-44 gi|147784781|emb|CAN66526.1| hypothetical protein [Vitis vinifer... 181 7e-44 gi|72384491|gb|AAZ67607.1| 80A08_22 [Brassica rapa subsp. pekine... 181 7e-44 gi|1370196|emb|CAA98175.1| RAB8D [Lotus japonicus] 181 7e-44 gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabi... 181 8e-44 gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C, put... 181 8e-44 gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [A... 181 8e-44 gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus] 181 8e-44 gi|158591297|gb|EDP29910.1| Ras-related protein Rab-10, putative... 181 8e-44 gi|125836147|ref|XP_001339841.1| PREDICTED: hypothetical protein... 181 8e-44 gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berg... 181 9e-44 gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Crypto... 180 9e-44 gi|66828353|ref|XP_647531.1| Rab GTPase [Dictyostelium discoideu... 180 9e-44 gi|1575675|gb|AAC47440.1| rab6 [Plasmodium falciparum] 180 1e-43 gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis] 180 1e-43 gi|157072984|gb|EAA32658.2| GTP-binding protein ryh1 [Neurospora... 180 1e-43 gi|432607|gb|AAB28535.1| ras-related GTP binding protein possess... 180 1e-43 gi|49456921|emb|CAG46781.1| RAB6A [Homo sapiens] 180 1e-43 Sequences not found previously or not previously below threshold: gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella... 192 4e-47 gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Asper... 189 3e-46 gi|125546252|gb|EAY92391.1| hypothetical protein OsI_013624 [Ory... 187 1e-45 gi|157354270|emb|CAO46871.1| unnamed protein product [Vitis vini... 187 1e-45 gi|15238115|ref|NP_199563.1| AtRABA5a (Arabidopsis Rab GTPase ho... 186 2e-45 gi|2500076|sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT... 186 2e-45 gi|125588449|gb|EAZ29113.1| hypothetical protein OsJ_012596 [Ory... 186 2e-45 gi|157761211|ref|XP_001672948.1| Hypothetical protein CBG01077 [... 185 5e-45 gi|17558550|ref|NP_503397.1| RAB family member (rab-1) [Caenorha... 185 5e-45 gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bomb... 185 6e-45 gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus] 184 6e-45 gi|118486589|gb|ABK95133.1| unknown [Populus trichocarpa] 184 6e-45 gi|1053065|gb|AAA80679.1| small GTP-binding protein 184 9e-45 gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassi... 183 1e-44 gi|401686|sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 >gnl|B... 183 2e-44 gi|41055496|ref|NP_957436.1| hypothetical protein LOC394117 [Dan... 182 3e-44 gi|66556180|ref|XP_392967.2| PREDICTED: similar to Rab-protein 1... 182 3e-44 gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding prote... 181 4e-44 gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [P... 181 5e-44 gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, put... 181 6e-44 gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae s... 181 6e-44 gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays] 181 7e-44 gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brass... 181 8e-44 gi|91087113|ref|XP_975150.1| PREDICTED: similar to CG3320-PA, is... 180 1e-43 >gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light intermediate chain isoform 1 [Pan troglodytes] Length = 351 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 211/355 (59%), Positives = 264/355 (74%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT+D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PDRELI P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +S K++KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 296 LFPPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|20988526|gb|AAH30450.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|24659541|gb|AAH39070.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 351 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 210/355 (59%), Positives = 264/355 (74%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R S E + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRRSHGSEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 +AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 SAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGE--SRSGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT S +QR+ V+ KD+PDRELI P Sbjct: 117 LSKPNDLWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P +LWKKV++K Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +ST K ++DP +DPQ++E +D +R QKDQEL+ YKR +K+WK + LD Sbjct: 296 LFPPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWKQIELD 350 >gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain isoform 1 variant [Homo sapiens] Length = 351 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 209/355 (58%), Positives = 261/355 (73%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD ELI P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKLRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 296 LFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 350 >gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain isoform 1 [Homo sapiens] gi|19908231|gb|AAL99216.1| dynein 2 light intermediate chain [Homo sapiens] gi|119620696|gb|EAX00291.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_c [Homo sapiens] Length = 351 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 209/355 (58%), Positives = 260/355 (73%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD ELI P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 296 LFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 350 >gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein [Equus caballus] Length = 351 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 210/355 (59%), Positives = 265/355 (74%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 SDTLW+IA AEV R S E + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSDTLWEIAKAEVEKRGSNGSESDGVE-----IGEKSVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GR+A+GHN PKDIAH WELGGG SL DL+ IPIT+D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRKAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V KV L K +Q++ + KD+PDRE+I P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVNKVIMKLGKKNSKASSEMRQKIWSNMQKDHPDREIIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FP+PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DSLSQIG P + DIG LHA++P +LWKKV+E+ Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMELWKKVYER 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP ++T K++KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 296 LFPPKNTNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 2 [Canis familiaris] Length = 348 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 213/355 (60%), Positives = 264/355 (74%), Gaps = 11/355 (3%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R S D E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGSEGDGLE--------IGEKSVFFIGSKNGGKTTIILRCLDRDE 53 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHN PKDIAH WELGGG SL DL+ IPIT+DN+ S+VLVLD Sbjct: 54 PPKPTLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTFSIVLVLD 113 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+K+ L KT +Q++ + KD+PDREL+ P Sbjct: 114 LSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDP 173 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 F +PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 174 FLIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKVRGVIN 232 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DSLSQIG P + DIG LHA +P DLWKKV+E+ Sbjct: 233 QLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYER 292 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 VFP +ST K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 293 VFPPKSTNTLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWKQIELD 347 >gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] gi|81673547|gb|AAI09911.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] Length = 351 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 212/355 (59%), Positives = 264/355 (74%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R S +E + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGSSENEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRR +GHN PKDIAH WELGGG SL DL+ IPIT+D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + + ++KV L K +Q++ + KD+PDREL+ P Sbjct: 117 LSKPNDLWPTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKDHPDRELLDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FP+PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG + KSI D +KPL I AG DSLSQIGPP + DIG LHA++P DLWKKV+EK Sbjct: 236 QLAFGINKSKSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDLWKKVYEK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +S K++KDP KDPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 296 LFPPKSINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|62822153|gb|AAY14702.1| unknown [Homo sapiens] gi|119620694|gb|EAX00289.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 352 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 208/356 (58%), Positives = 259/356 (72%), Gaps = 9/356 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDY-PDRELIS 181 LSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+ D ELI Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPQDHELID 176 Query: 182 PFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFI 241 PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R I Sbjct: 177 PFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVI 235 Query: 242 NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFE 301 NQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+E Sbjct: 236 NQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYE 295 Query: 302 KVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 K+FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 296 KLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 351 >gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] Length = 350 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 208/355 (58%), Positives = 259/355 (72%), Gaps = 9/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT +Q++ +D+PD ELI P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIW-NYAEDHPDHELIDP 175 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 176 FPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 234 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK Sbjct: 235 QLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEK 294 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 295 LFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 349 >gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 387 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 212/354 (59%), Positives = 265/354 (74%), Gaps = 8/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 SDTLW+IA AEV RE + + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 39 SDTLWEIAKAEVEKREISENGGDGAE-----VCEKSVFFIGSKNGGKTTIILRCLDRDEP 93 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT +++ S+VLVLDL Sbjct: 94 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITNESLRTFSLVLVLDL 153 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPF 183 SKPN LW TMESLL + V+K+ L KT +Q++ + KD+PDRELI PF Sbjct: 154 SKPNDLWPTMESLLQVTKAHVDKLIMKLGKTSTKAASEMRQKMWSNMQKDHPDRELIDPF 213 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P+PL+I+GSK+DIFQDFDSEKRK+ICKTLRF++H+YGASL+F S KSE + K R INQ Sbjct: 214 PIPLVIIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMFAS-KSEALLLKIRGVINQ 272 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSIS D +KPL IPAG DSLSQIG P +E +IG LHA+ P +LWKKV+EKV Sbjct: 273 LAFGIDKSKSISVDQNKPLFIPAGLDSLSQIGSPPLSENEIGKLHAQTPMELWKKVYEKV 332 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +S KE +DP +DPQ++E +D +RAQKDQEL+QYK+ +KSWK + D Sbjct: 333 FPPKSANTSKETRDPARDPQYAESEVDEMRAQKDQELEQYKKNTSKSWKQIEFD 386 >gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Danio rerio] gi|32766386|gb|AAH55198.1| Zgc:63673 [Danio rerio] Length = 358 Score = 362 bits (929), Expect = 3e-98, Method: Composition-based stats. Identities = 358/358 (100%), Positives = 358/358 (100%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL Sbjct: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV Sbjct: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI Sbjct: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF Sbjct: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF Sbjct: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 Query: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP Sbjct: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 >gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 light intermediate chain [Gallus gallus] Length = 637 Score = 360 bits (924), Expect = 9e-98, Method: Composition-based stats. Identities = 204/360 (56%), Positives = 263/360 (73%), Gaps = 9/360 (2%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPK + DTLWDIA EV RE+ D+ + E +++V FMGSK GGKTTI+LR L Sbjct: 284 MPK-AGDTLWDIARDEVEKRENNGDDGKRVE-----VCEKSVLFMGSKNGGKTTIILRCL 337 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 ER+E KPTL LEYTFGRRAR HN PKDIAH WE+GGG SL +L++IPIT +N+ +VV Sbjct: 338 EREEVPKPTLVLEYTFGRRARRHNAPKDIAHFWEIGGGTSLLELIRIPITVNNIRSFAVV 397 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES--RSGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + RN V K+ A L+KT KQ++ L +D+PD + Sbjct: 398 LVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKTDPEVAAEIKQKMQNNLQRDHPDYD 457 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 L+ PFP+PL+I+GSK+DIF +FDSE RK+I +TLRF++H+YGASL+FTS KSE + K+R Sbjct: 458 LVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRFVSHYYGASLVFTS-KSEALLLKAR 516 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 + IN LAFG +R KS+S D SKPL IPAG DSLSQIGPP ++ +IG + A P +LWKK Sbjct: 517 ALINHLAFGYDRSKSVSVDHSKPLFIPAGLDSLSQIGPPPTSDSNIGKMRANTPLELWKK 576 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 VFEK FP S + ++ KDP + Q++E +D +RAQK+QE +QYKR +KSWK + DP Sbjct: 577 VFEKTFPPRSFSDLQDSKDPAQVSQYAEYEVDVMRAQKNQEFEQYKRNASKSWKEMDFDP 636 >gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 [Macaca mulatta] Length = 365 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 199/359 (55%), Positives = 254/359 (70%), Gaps = 8/359 (2%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 +P+ +TLW+IA AEV R E + E +++VFF+GSK GGKTTI+LR L Sbjct: 12 VPQKIIETLWEIAKAEVEKRGINGSEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCL 66 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RD K L L ++F G +TPKDIAH WELGGG SL DL+ +PIT+D + S+V Sbjct: 67 DRDRPPKMVLFLFFSFSFCHPGWSTPKDIAHFWELGGGTSLLDLISVPITSDTLRTFSLV 126 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+K+ L KT +Q++ + KD+PDRE Sbjct: 127 LVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNPKAASEMRQKIWNNMQKDHPDRE 186 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+DIFQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 187 LIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 245 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS SQIG P E DIG LHA +P +LWKK Sbjct: 246 GVINQLAFGIDKSKSICVDQNKPLLITAGLDSFSQIGSPPVPENDIGKLHAHSPMELWKK 305 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 306 VYEKLFPPKSINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 364 >gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermediate chain isoform 2 [Pan troglodytes] Length = 334 Score = 351 bits (900), Expect = 5e-95, Method: Composition-based stats. Identities = 202/342 (59%), Positives = 252/342 (73%), Gaps = 11/342 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT+D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQEL 340 V+EK+FP +S K++KDP +DPQ++E +D +R QKDQ L Sbjct: 292 VYEKLFPPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQVL 333 >gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chain isoform 3 [Homo sapiens] Length = 334 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 199/339 (58%), Positives = 247/339 (72%), Gaps = 11/339 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD E Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKD 337 V+EK+FP +S K++KDP +DPQ++E +D +R QKD Sbjct: 292 VYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKD 330 >gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] Length = 341 Score = 341 bits (875), Expect = 4e-92, Method: Composition-based stats. Identities = 196/335 (58%), Positives = 248/335 (74%), Gaps = 11/335 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV+ R S E + E ++++FF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVQKRRSHGSEGDGAE-----IGEKSLFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE+AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDESAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE--SRSGKQRVPRVLHKDYPDRE 178 LVLDLSKPN W TME+LL + ++ V+KV L KT S +QR+ V+ KD+PDRE Sbjct: 113 LVLDLSKPNDHWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 231 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P +LWKK Sbjct: 232 GVINQLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKK 291 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIR 333 V++K+FP +ST K ++DP +DPQ++E +D +R Sbjct: 292 VYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMR 326 >gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] Length = 318 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 187/319 (58%), Positives = 234/319 (73%), Gaps = 8/319 (2%) Query: 21 ESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRA 80 E + E ++++VFF+GSK GGKTTI+LR L+RDE KPTLALEYT+GRRA Sbjct: 2 GINGSEGDGAE-----FAEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRA 56 Query: 81 RGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLG 140 +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDLSKPN LW TME+LL Sbjct: 57 KGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQ 116 Query: 141 SARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQ 198 + ++ V+KV L KT +Q++ + KD+PD ELI PFPVPL+I+GSK+D+FQ Sbjct: 117 ATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQ 176 Query: 199 DFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 DF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R INQLAFG ++ KSI D Sbjct: 177 DFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKLRGVINQLAFGIDKSKSICVDQ 235 Query: 259 SKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDP 318 +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK+FP +S K++KDP Sbjct: 236 NKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDP 295 Query: 319 VKDPQFSEPLIDSIRAQKD 337 +DPQ++E +D +R QKD Sbjct: 296 ARDPQYAENEVDEMRIQKD 314 >gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115941395|ref|XP_001177851.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 363 Score = 324 bits (830), Expect = 7e-87, Method: Composition-based stats. Identities = 162/356 (45%), Positives = 244/356 (68%), Gaps = 7/356 (1%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 M ++WDIA E + + +E+ E S+ + F+GSK GKT+I+LRFL Sbjct: 1 MFANKEKSIWDIAILEAEQKHATESKEQGGEAKG---SENHILFIGSKNAGKTSIILRFL 57 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 E++E KPT+ALEYTFGRRA+GHN KDI H+WELGGG LS L +IP++ D + S++ Sbjct: 58 EKEEAPKPTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLM 117 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAAL--QKTGESRSGKQRVPRVLHKDYPDRE 178 +V+DLS+P LW TME+L+ A + VE+V + K+R + + D+PDR+ Sbjct: 118 VVMDLSQPYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHPDRD 177 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 ++ PFP+PL+IVG+K+D++QDFD EKRKVI KTLRF+AH YGA+L F+S+K++ MS+++ Sbjct: 178 MLDPFPLPLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTK 237 Query: 239 SFINQLAFGTE-RPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 + ++ LAFGT K+IS DP+KP+++P G DSL QIG P + D+G +A+ P DLWK Sbjct: 238 NLVSHLAFGTTLSLKTISIDPNKPISVPFGLDSLEQIGLPPVADDDLGRSNARTPLDLWK 297 Query: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKS 353 + F FP +ST + ++DP KDPQ++E +D++R QK++EL++Y+++ + K Sbjct: 298 QAFTSYFPQKSTIKA-IVEDPSKDPQYAEAAVDNMREQKNKELERYRKQAERRAKE 352 >gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella vectensis] gi|156226126|gb|EDO46938.1| predicted protein [Nematostella vectensis] Length = 366 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 161/357 (45%), Positives = 227/357 (63%), Gaps = 3/357 (0%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 K S T+WD+A E + ++ +E H + +F +GSK GKT+++LRFL+R Sbjct: 4 KRSDKTIWDLAIEERDYLLNEAKKKGTQESSPHG-EEAGIFLIGSKNAGKTSMVLRFLDR 62 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 DE KPT AL+YTFGR+A+GHN KD+ H+WELGGG LS L+ IPI D+V LS+++ Sbjct: 63 DEVPKPTTALDYTFGRKAKGHNIAKDVGHIWELGGGTFLSKLIDIPINVDSVRGLSIIIF 122 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQR--VPRVLHKDYPDRELI 180 LDLS PN LW TME+LL + +V KV L S K R D+PD+ + Sbjct: 123 LDLSLPNELWHTMETLLNQVKKRVHKVMDELAAKNPSAVQKLRNDAWEKFGTDHPDKSFV 182 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 PFP+PL IVG K+DI+QDFD EKRK+I + LRF+AH GA L F S+K+E + +SR Sbjct: 183 EPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGRSRGM 242 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 I L F T K+I D +KP+ + AG DSL+QIG P D+G L ++NP+DLWK + Sbjct: 243 IGHLLFHTSLGKAIGVDHNKPIIVSAGQDSLAQIGAPPVASEDLGRLQSRNPYDLWKAAY 302 Query: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP E +++ + +DP KDPQ+ E +D++R QKD+ELD+Y+R+ + + ++ D Sbjct: 303 ATFFPPEKSKQHSDREDPSKDPQYFEAAVDAMRKQKDEELDRYRRQAERKAREMSRD 359 >gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|73919260|sp|Q8R1Q8|DC1L1_MOUSE Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|19484061|gb|AAH23347.1| Dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|74198263|dbj|BAE35301.1| unnamed protein product [Mus musculus] gi|148677352|gb|EDL09299.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] Length = 523 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 127/347 (36%), Gaps = 48/347 (13%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPTGKNVLLLGEDGAGKTSLIRR-IQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ E R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRTTGAQEDRGDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 330 DKKIG---ILHENFQTLKVEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin light chain A [Monodelphis domestica] Length = 520 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 73/347 (21%), Positives = 128/347 (36%), Gaps = 46/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V +G GKT+++ R Sbjct: 36 EEDDGQNLWSCILSEVSTR-----------SRSKLPSGKNVLLLGEDGAGKTSLIGRIQG 84 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 R E K EY + + ++W L G + L++ + A+++ V+L Sbjct: 85 RPEECKKGRGAEYLYLSVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMEANSLRDTLVIL 144 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD----- 176 V+D+SKP ++++ R ++K+ ++ E R + + D Sbjct: 145 VVDMSKPWTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASP 204 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L VP+L+V +K D D+ E I Sbjct: 205 QRRSTLQEDKDDSVMLPLGADTLTYNLGVPVLVVCTKCDAISVLEKEHDYKDEHFDFIQS 264 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 265 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFKIPAVVVEKDAVFIPAGWDN 324 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 325 DKKIG---ILHENFQTLKAEDSFEDIITKPPVRKFVHEKEIVAEDDQ 368 >gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 127/347 (36%), Gaps = 48/347 (13%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPTGKNVLLLGEDGAGKTSLIRR-IQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ E R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 330 DKKIG---ILHENFQTLKIEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibenclamide-sensitive voltage-gated potassium channel, partial [Ornithorhynchus anatinus] Length = 449 Score = 304 bits (779), Expect = 6e-81, Method: Composition-based stats. Identities = 183/343 (53%), Positives = 242/343 (70%), Gaps = 16/343 (4%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +TLW+IA AEV +E +E +++VFF+GSK GGKTTI+LR L+RDE A Sbjct: 1 ETLWEIARAEVEKKEKPGGGDEG---------EKSVFFVGSKNGGKTTIILRCLDRDEPA 51 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 +PTLALEYTFGRRARGHNTPKDIAH WELGGG SL DL +IPITAD++ + + LDLS Sbjct: 52 RPTLALEYTFGRRARGHNTPKDIAHFWELGGGTSLLDLARIPITADSLRTFATDIFLDLS 111 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVP 186 +P+ LW T E LL + R L + G + R + +D+PDRE I PFP+P Sbjct: 112 RPSELWLTAEHLLRAVRTH----VENLGQPGTRAAATPRTWSPVPEDHPDREFIDPFPIP 167 Query: 187 LLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 L+I+GSK+D+FQ+ DSEKRKVIC+TLRFLAH +GA+L+FT KSE + K+RS I+ LAF Sbjct: 168 LVIIGSKYDVFQNLDSEKRKVICRTLRFLAHHHGATLMFTG-KSEALLLKTRSVISHLAF 226 Query: 247 --GTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVF 304 G +R K+++ D +KPL IPAG DS SQIGPP + DIG L + P +LWK+V+ K F Sbjct: 227 GVGVDRSKALTLDQNKPLFIPAGLDSFSQIGPPPSAAGDIGKLRVQTPLELWKEVYNKAF 286 Query: 305 PHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 P ++ +RK+LKDP +DPQ++E +D++RAQKDQ + +R Q Sbjct: 287 PLQTKSDRKDLKDPGRDPQYAEREVDAMRAQKDQRKKRRERGQ 329 >gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A isoform 2 [Pan troglodytes] gi|134047749|sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|119584837|gb|EAW64433.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_c [Homo sapiens] gi|124297735|gb|AAI31621.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] Length = 523 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 128/347 (36%), Gaps = 48/347 (13%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ + R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 330 DKKIG---ILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 128/347 (36%), Gaps = 48/347 (13%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ + R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 330 DKKIG---ILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light chain-A [Canis familiaris] Length = 524 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 128/347 (36%), Gaps = 48/347 (13%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAISLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R ++K+ ++ E R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRNTGSQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 330 DKKIG---ILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIVAEDDQ 373 >gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 128/347 (36%), Gaps = 48/347 (13%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ + R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQIEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 GRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPFD-LWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F+ + K + F HE ++ + Sbjct: 330 DKKIG---ILHENFQTLKAEDNFEGIITKPPVRKFVHEKEIMAEDDQ 373 >gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] gi|73919261|sp|Q9QXU8|DC1L1_RAT Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|6651427|gb|AAF22294.1|AF181992_1 dynein light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 301 bits (771), Expect = 5e-80, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 126/347 (36%), Gaps = 48/347 (13%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSRILREVSTR-----------SRSKLPTGKNVLLLGEDGAGKTSLIRR-IQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ E R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 330 DKKIG---ILHENFQTLKIEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 301 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 213/364 (58%), Positives = 258/364 (70%), Gaps = 13/364 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPK+SSDTLWD+AAAEV SRES D E + +RTVF MGSKAGGKT+ILL+ L Sbjct: 1 MPKISSDTLWDLAAAEVNSRESEDDYGER-----NVAVERTVFLMGSKAGGKTSILLKCL 55 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE +KPTLALEYTFGRRARGHNTPKDIAH+WELGGG LSDLVQIPIT+ ++ FLSV+ Sbjct: 56 DRDEPSKPTLALEYTFGRRARGHNTPKDIAHIWELGGGTFLSDLVQIPITSADLKFLSVI 115 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------SGKQRVPRVLHKDY 174 L++DLSKPN LW T E LL + +EK + QK ++ + Q RVL DY Sbjct: 116 LIVDLSKPNELWGTTEKLLQVTQAHLEKAFSMAQKAQTAKPAATHQTATQSAARVLPADY 175 Query: 175 PDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLI-FTSSKSETT 233 PDRELIS FPVPLLIVGSK+DIFQ+FDS+K+K+I + LRF+AH Y ASLI Sbjct: 176 PDRELISAFPVPLLIVGSKYDIFQEFDSDKKKLIAQMLRFVAHSYAASLIVIHQXXXXXX 235 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 K++S D +KPL IPAGSDS SQIG P A +VDI +LHA+NP Sbjct: 236 XXXXXXXXXXXXXXXXXXKTVSMDLTKPLIIPAGSDSFSQIGSPCAADVDIASLHARNPK 295 Query: 294 DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKS 353 DLW+KV VFP E + ++LKDP KDPQ+SEP ID++RAQKDQEL+QYKR AK+W+ Sbjct: 296 DLWRKVCGCVFPPEKEHQ-QDLKDPAKDPQYSEPQIDAMRAQKDQELEQYKRNAAKTWQG 354 Query: 354 LALD 357 L L+ Sbjct: 355 LDLE 358 >gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] gi|5531813|gb|AAD44481.1| dynein light chain-A [Homo sapiens] Length = 523 Score = 301 bits (770), Expect = 7e-80, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 127/347 (36%), Gaps = 48/347 (13%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ + R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E Sbjct: 210 RRNTASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 330 DKKIG---ILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein light intermediate chain 2 [Monodelphis domestica] Length = 493 Score = 300 bits (769), Expect = 8e-80, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 125/361 (34%), Gaps = 48/361 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + + G GKTT+L + + Sbjct: 28 EEDEGQNLWSSILSEVSTR-----------SRSKLPSGKNILVFGEDGSGKTTLLAKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E +K LEY + ++W L G + L++ ++A+ + V+ Sbjct: 76 GAEHSKKGRGLEYLYLNIHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAETLQETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------ 175 V D+S+P + E+++ R ++K+ ++ + + + + Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRDMEQKFVKDFQEYVEPEEGYQGSP 195 Query: 176 --------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLASAQDGENVILPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHVRKFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ +P+ D K + H+ ++ + + Q Sbjct: 316 NEKKIA---ILHENFTTVKPDDPYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQQSFLAK 372 Query: 329 I 329 Sbjct: 373 Q 373 >gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_a [Mus musculus] Length = 527 Score = 300 bits (769), Expect = 8e-80, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 127/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 63 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 110 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 111 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 170 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 171 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 230 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 231 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 290 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 291 AHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 350 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 351 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 400 Query: 329 IDSIRA 334 S+ A Sbjct: 401 QQSLLA 406 >gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 [Bos taurus] gi|86438315|gb|AAI12622.1| Similar to Dynein light intermediate chain 1, cytosolic (Dynein light chain A) (DLC-A) [Bos taurus] Length = 524 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 126/347 (36%), Gaps = 48/347 (13%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDPYHKGLLKFSLDAISLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R ++K+ ++ E R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L VP+L+V +K D D+ E I Sbjct: 210 RRSTASQEDRDDSVLLPLGADTLTQNLGVPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+ S K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYASVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL A++ F D+ K + F HE ++ + Sbjct: 330 DKKIG---ILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 125/365 (34%), Gaps = 54/365 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V G GKTT++ + + Sbjct: 24 EDDEGQNLWSSILSEVSTR-----------SSSKLPSGKNVLLFGEDGSGKTTLMSKL-Q 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------ 175 V+D+S+P + E+++ R V+K+ ++ E + + + Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 176 -------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVFIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + T+ ++PF D K + H+ +D Q Sbjct: 312 DKKIG---ILHENFTTVRPEDPFEDFITKPPVRKLVHDKEIS-------AEDEQVFLMKQ 361 Query: 330 DSIRA 334 S+ A Sbjct: 362 QSLLA 366 >gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] gi|62531080|gb|AAH93336.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 122/347 (35%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V G GKTT++ + + Sbjct: 24 EDDEGQNLWSSILSEVSTR-----------SSSKLPSGKNVLLFGEDGSGKTTLMSKL-Q 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------ 175 V+D+S+P + E+++ R V+K+ ++ E + + + Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 176 -------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVLIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + T+ ++PF D K + H+ ++ + Sbjct: 312 DKKIG---ILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQ 355 >gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-intermediate chain [Xenopus laevis] gi|28280005|gb|AAH45030.1| Dnclic1-prov protein [Xenopus laevis] Length = 508 Score = 297 bits (760), Expect = 9e-79, Method: Composition-based stats. Identities = 66/347 (19%), Positives = 125/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + P + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTR-----------SRSKLPFGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ + +V ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDDDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------ 175 V+D+S+P ++++ R V+K+ ++ E R + + Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKLKIPPEEMREMEERIVRHFQEYVEPGDELPTSP 198 Query: 176 -------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 D L +P+++V +K D D+ E I Sbjct: 199 QRRNTSSDECDDSVILPLADDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFKMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 319 DKKIG---ILHENFQTLKPEDTFEDVITKPPVRKFVHEKEIVAEDDQ 362 >gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [Danio rerio] Length = 500 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 70/365 (19%), Positives = 124/365 (33%), Gaps = 54/365 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V G GKTT++ + + Sbjct: 24 EDDEGQNLWSSILSEVSTR-----------SSSKLPSGKNVLLFGEDGSGKTTLMSKL-Q 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------ 175 V+D+S+P + E+++ R V+K+ ++ E + + + Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 176 -------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVFIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +I + T+ ++PF D K + H+ +D Q Sbjct: 312 DKKI---CILHENFTTVRPEDPFEDFITKPPVRKLVHDKEIS-------AEDEQVFLMKQ 361 Query: 330 DSIRA 334 S+ A Sbjct: 362 QSLLA 366 >gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 [Xenopus tropicalis] gi|111305599|gb|AAI21354.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Xenopus tropicalis] Length = 508 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 125/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ + +V ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP 167 V+D+S+P ++++ R V+K+ Q+ E P Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKLKIPPEEMKEMEEKIVRNFQEYVEPGEEFPASP 198 Query: 168 RVLHK-----------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 + + + L +P+++V +K D D+ E I Sbjct: 199 QKRNTSSDEQDDSVILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFLFNMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 319 DKKIG---ILHENFQTLKPEDTFEDIITKPPVRKFVHEKEIVAEDDQ 362 >gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light chain A [Gallus gallus] gi|2494217|sp|Q90828|DC1L1_CHICK Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) (LIC57/59) gi|510249|emb|CAA55698.1| dyenin light chain A [Gallus sp.] Length = 515 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 66/348 (18%), Positives = 130/348 (37%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS ++V +G GKT+++ + ++ Sbjct: 31 EEDDGQNLWSCILSEVSTR-----------SRSKLPSGKSVLLLGEDGAGKTSLIGK-IQ 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++ L G + L++ + A+++ ++L Sbjct: 79 GIEEYKKGRGMEYLYLNVHDEDRDDQTRCNVRILDGDLYHKGLLKFAMEANSLKDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD----- 176 V+D+S+P ++++ R ++K+ ++ E R + + D Sbjct: 139 VVDMSRPWTAMDSLQKWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFPASP 198 Query: 177 ---------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 L +P+++V +K D D+ E I Sbjct: 199 QRRNTSLQEDKDDSVILPLGADTLTCNLGIPVVVVCTKCDAISVLEKEHDYRDEHFDFIQ 258 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K + +I Q +G + IPAG D Sbjct: 259 SHIRRFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFNVPAVVVEKDAVFIPAGWD 318 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +IG + TL A++ F D +K + F HE ++ + Sbjct: 319 NDKKIG---ILHENFQTLKAEDSFEDSIRKPPVRKFVHEKEIVAEDDQ 363 >gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculus] gi|74183685|dbj|BAE24463.1| unnamed protein product [Mus musculus] gi|74190862|dbj|BAE28215.1| unnamed protein product [Mus musculus] gi|74212500|dbj|BAE30992.1| unnamed protein product [Mus musculus] Length = 492 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 127/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|55726458|emb|CAH89998.1| hypothetical protein [Pongo pygmaeus] Length = 492 Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 127/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------AGSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] gi|73919263|sp|Q6PDL0|DC1L2_MOUSE Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|35193080|gb|AAH58645.1| Dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] Length = 492 Score = 294 bits (754), Expect = 5e-78, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 127/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKKLA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Rattus norvegicus] gi|2494218|sp|Q62698|DC1L2_RAT Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|619665|gb|AAA80334.1| LIC-2 gi|149032345|gb|EDL87236.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_b [Rattus norvegicus] Length = 497 Score = 294 bits (753), Expect = 6e-78, Method: Composition-based stats. Identities = 68/348 (19%), Positives = 124/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light intermediate chain 2 isoform 3 [Bos taurus] Length = 492 Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 128/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYVEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKEAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] Length = 492 Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 127/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Homo sapiens] Length = 492 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 127/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Homo sapiens] gi|3287825|sp|O43237|DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|2665836|gb|AAB88513.1| dynein light intermediate chain 2 [Homo sapiens] gi|119603445|gb|EAW83039.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|119603446|gb|EAW83040.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|158256964|dbj|BAF84455.1| unnamed protein product [Homo sapiens] Length = 492 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 127/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|67970473|dbj|BAE01579.1| unnamed protein product [Macaca fascicularis] Length = 492 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 72/366 (19%), Positives = 128/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS +++ G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKSILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] gi|11992258|gb|AAG42486.1|AF317841_1 cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] Length = 508 Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 125/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ NV ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP 167 V+D+S+P ++++ R ++K+ Q+ E P Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 168 RVLHK-----------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 + + + L +P+++V +K D D+ E I Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 319 DKKIG---ILHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQ 362 >gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] Length = 508 Score = 290 bits (742), Expect = 1e-76, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 125/347 (36%), Gaps = 47/347 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ NV ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP 167 V+D+S+P ++++ R ++K+ Q+ E P Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 168 RVLHK-----------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 + + + L +P+++V +K D D+ E I Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +IG + TL ++ F D+ K + F HE ++ + Sbjct: 319 DRKIG---ILHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQ 362 >gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Gallus gallus] gi|53126839|emb|CAG30989.1| hypothetical protein [Gallus gallus] Length = 488 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 127/360 (35%), Gaps = 47/360 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + + G GKTT++ + ++ Sbjct: 24 EEEEGQNLWSSILSEVSTR-----------SRSKLPSGKNILVFGDDGSGKTTLMAK-IQ 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + + ++W L G + L++ ++A+++ VV Sbjct: 72 GAEHGKKGRGLEYLYLNIHDEDRDDQTRCNVWILDGDLYNKGLLKFAVSAESLQDTIVVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------ 175 V D+S+P + E+++ + ++K+ ++ + + + + Sbjct: 132 VADMSRPWTVMESLQKWASVLQEHIDKLKIPPEEMRDMEQKFIKEFQEYVEPEEGYQGSP 191 Query: 176 -------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 + L +P+L+V +K D D+ E I Sbjct: 192 QRRGPSSGQEDESVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K E + +I +G + + IPAG D+ Sbjct: 252 HIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFQFTTPALVVEKDAVFIPAGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +I + T+ + + D K + H+ ++ + + Q Sbjct: 312 EKKIA---ILHENFTTVKPDDAYEDFIAKPPVRKLVHDKELAAEDEQVFLMKQQSFLAKQ 368 >gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light intermediate chain 2, cytosolic (LIC53/55) (LIC-2) [Canis familiaris] Length = 481 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 71/358 (19%), Positives = 124/358 (34%), Gaps = 55/358 (15%) Query: 10 WDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPT 69 W +EV +R + PS + + G GKTT++ + + E K Sbjct: 25 WSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-QGAEHGKKG 72 Query: 70 LALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPN 129 LEY + ++W L G + L++ ++A+++ V+ V D+S+P Sbjct: 73 RGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSRPW 132 Query: 130 ALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVPRVLHK--- 172 + E+++ R ++K+ Q E G Q P+ Sbjct: 133 TVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEPEEGCQGSPQRRGPLTS 192 Query: 173 ---------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 D L +P+L+V +K D D+ E I LR Sbjct: 193 GPDEENVALPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRRFCL 252 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 253 QYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFVTPALVVEKDAVFIPAGWDNEKKIA-- 310 Query: 278 VATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRA 334 + T+ ++ + D K + H+ +D Q S+ A Sbjct: 311 -ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMKQQSLLA 360 >gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Xenopus laevis] gi|112419317|gb|AAI22489.1| MGC154222 protein [Xenopus laevis] Length = 487 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 61/348 (17%), Positives = 123/348 (35%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW ++V + + PS + + G GKTT++ + + Sbjct: 21 EEDEGQSLWSSILSDVST-----------SARSKLPSGKNILVFGEDGSGKTTLMAKL-Q 68 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ + A+++S V Sbjct: 69 GAEHNKKGRGLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESISETVAVF 128 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------ 175 V D+S+P + E++ R ++K+ ++ E + + + Sbjct: 129 VGDMSRPWTIMESLLKWASVLREHIDKLKIPPEEMRELEQKIIKDFQEYVEPEEALSGSP 188 Query: 176 --------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 189 QRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDFIQ 248 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YG++LI+TS K E + +I + ++ + IPAG D Sbjct: 249 SHIRKFCLQYGSALIYTSVKEEKNLDLLYKYIVHKTYNFHFNRAAMVVEKDSVFIPAGWD 308 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +IG + T+ ++ + D K + H+ ++ + Sbjct: 309 NEKKIG---ILHENFSTVKPEDAYEDFIVKPPVRKLVHDKEVAAEDEQ 353 >gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] Length = 335 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 68/334 (20%), Positives = 122/334 (36%), Gaps = 48/334 (14%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 16 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 63 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 64 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 123 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ + R + + D Sbjct: 124 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQ 183 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 184 RRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 243 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 244 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 303 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKV 303 +IG + TL A++ F D+ K + Sbjct: 304 DKKIG---ILHENFQTLKAEDNFEDIITKPPVRK 334 >gi|157119433|ref|XP_001653379.1| conserved hypothetical protein [Aedes aegypti] gi|108883162|gb|EAT47387.1| conserved hypothetical protein [Aedes aegypti] Length = 347 Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats. Identities = 115/355 (32%), Positives = 189/355 (53%), Gaps = 25/355 (7%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 M +++T+ DIA V + E P++RT+F +GSK GK+T++ RFL Sbjct: 10 MEPDTTETIQDIAMKLVTE------HMKQESSLTGGPTERTIFVLGSKGAGKSTLINRFL 63 Query: 61 ERDETAKPTLALEYTFGRRARGHNT-PKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 +RD+ +PTLALEY+FGRR K+I ++WELG ++ + L+++P+ + ++ + Sbjct: 64 DRDDITRPTLALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAAFAA 123 Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 V+VLDLS+P+ LW ++ +L + + K C+ E ++R+ + + D+ D Sbjct: 124 VIVLDLSQPDRLWTDLQCILNGLKQAISKNCSP----KEVSEMQERMKQKVGLDHEDLNT 179 Query: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 + P P++IVG K+D FQ+ DSE +K +C+ LR ++H GA+LIF +SK+ + R Sbjct: 180 LEILPFPVIIVGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRD 239 Query: 240 FINQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 +N L FG+ K+ + D + P+ +P G DS +IG IG Sbjct: 240 AMNHLGFGSPSNPFKATALDHNGPIVVPFGGDSWEKIGVTPTNSERIGMS---------- 289 Query: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 + P T + DP KD F E +ID +RAQKD EL + ++ K Sbjct: 290 --YSAQIPQVGTEKVSIPDDPAKDGGFKERVIDELRAQKDDELMRLLKDTEMRMK 342 >gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] Length = 480 Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats. Identities = 60/348 (17%), Positives = 119/348 (34%), Gaps = 50/348 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW ++V + + PS + + G GKTT++ + + Sbjct: 16 EEDEGQSLWSSILSDVST-----------SARSKLPSGKNILVFGEDGSGKTTLVAKL-Q 63 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ + A+++ V Sbjct: 64 GAEHNKKGRGLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESIGETVAVF 123 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------ 175 V D+S+P + E++ R ++K+ ++ E + + + Sbjct: 124 VGDMSRPWTIMESLLKWASVLREHIDKLKIPPEEIRELEQKIIKDFQEYVEPEDALSGSP 183 Query: 176 --------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 184 QRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDFIQ 243 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K E + +I + + + IPAG D Sbjct: 244 SHIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYNFHFNCAAMVVEKDSVFIPAGWD 303 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +IG + ++ + D K + H+ ++ + Sbjct: 304 NEKKIG---ILHENF--SKPEDAYEDFIVKPPVRKLVHDKEVAAEDEQ 346 >gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon nigroviridis] Length = 463 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 122/355 (34%), Gaps = 53/355 (14%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 ++V +R + PS + + G GKTT++ + E E K Sbjct: 1 SSILSDVSTR-----------SSSKLPSGKNILVFGEDGSGKTTLMAKL-EGAEHNKKGR 48 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + ++W L G + L++ ++A ++S V V+D+S+P Sbjct: 49 GLEYLYLSVHDEDRDDLTRCNVWILDGDLYHKGLLKFAVSAKSLSDCLAVFVVDMSRPWI 108 Query: 131 LWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP--------------- 175 + ++++ R+ ++K+ E + + + Sbjct: 109 IMDSLQKWSSVLRDHLDKLKIEPDVMREMEQKMVKAFQEYSEPEDANSSSPQRRAPTAGE 168 Query: 176 ---------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYG 220 + L +P+L+V +K D D+ E I +R YG Sbjct: 169 DEAVVLPLGENTLTHNLGIPVLVVCTKCDAVSVLEKEHDYKEEHFDFIQSHIRKFCLQYG 228 Query: 221 ASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVAT 280 A L +TS K E + +I + + + IP+G D+ +I Sbjct: 229 AGLFYTSVKEEKNLDLLYKYIVHKLYDFQFTTPALVVEKDAVFIPSGWDNEKKIA---IL 285 Query: 281 EVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRA 334 ++ T+ ++PF D K + HE +D Q S+ A Sbjct: 286 HENLSTVRPEDPFEDFIAKPPVRKLVHEKEIN-------AEDEQVFLMKQQSLLA 333 >gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632687|emb|CAM56700.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 489 Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 122/345 (35%), Gaps = 45/345 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V MG GKTT++ + + Sbjct: 25 EEEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVVVMGEVGSGKTTLVAKL-Q 72 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E LEY + + + W L G + L + I+ +N+ ++ Sbjct: 73 GVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 132 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--------------------- 160 V+DLS+P ++++ R+ V+K+ + E Sbjct: 133 VVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVP 192 Query: 161 --SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 + + + L +P+++V +K D D+ E I + Sbjct: 193 QRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHI 252 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+L++TS K + ++ +G + IP+G D+ Sbjct: 253 RRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEK 312 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +I + + A++ F D+ K + F HE + ++ + Sbjct: 313 KIA---ILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQ 354 >gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] Length = 485 Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 122/345 (35%), Gaps = 45/345 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V MG GKTT++ + + Sbjct: 21 EEEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVVVMGEVGSGKTTLVAKL-Q 68 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E LEY + + + W L G + L + I+ +N+ ++ Sbjct: 69 GVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 128 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--------------------- 160 V+DLS+P ++++ R+ V+K+ + E Sbjct: 129 VVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVP 188 Query: 161 --SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 + + + L +P+++V +K D D+ E I + Sbjct: 189 QRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHI 248 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+L++TS K + ++ +G + IP+G D+ Sbjct: 249 RRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEK 308 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +I + + A++ F D+ K + F HE + ++ + Sbjct: 309 KIA---ILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQ 350 >gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light intermediate chain 1 [Danio rerio] gi|94733316|emb|CAK11123.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632686|emb|CAM56699.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 501 Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 122/345 (35%), Gaps = 45/345 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V MG GKTT++ + + Sbjct: 27 EEEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVVVMGEVGSGKTTLVAKL-Q 74 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E LEY + + + W L G + L + I+ +N+ ++ Sbjct: 75 GVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 134 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--------------------- 160 V+DLS+P ++++ R+ V+K+ + E Sbjct: 135 VVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVP 194 Query: 161 --SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 + + + L +P+++V +K D D+ E I + Sbjct: 195 QRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHI 254 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+L++TS K + ++ +G + IP+G D+ Sbjct: 255 RRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEK 314 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 +I + + A++ F D+ K + F HE + ++ + Sbjct: 315 KIA---ILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQ 356 >gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic, light intermediate polypeptide 2 [Macaca mulatta] Length = 497 Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats. Identities = 69/371 (18%), Positives = 126/371 (33%), Gaps = 60/371 (16%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSK-----------FDIFQDFDSEK 204 + D L +P+L+V +K F + Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKVRARGLLAWLGSGSEHAFREKN 255 Query: 205 RKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 ++ LR YGA+LI+TS K E + +I +G + I Sbjct: 256 VRIFDSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFI 315 Query: 265 PAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQ 323 PAG D+ +I + T+ ++ + D K + H+ +D Q Sbjct: 316 PAGWDNEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQ 365 Query: 324 FSEPLIDSIRA 334 S+ A Sbjct: 366 VFLMKQQSLLA 376 >gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae str. PEST] gi|116118470|gb|EAA13896.3| AGAP010165-PA [Anopheles gambiae str. PEST] Length = 339 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 122/356 (34%), Positives = 190/356 (53%), Gaps = 26/356 (7%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 M +++T+ DIA V + A P++RT+F +GSK GK+T++ RFL Sbjct: 1 MEVDTTETIQDIAIKLVTEQLRNESRL------ATTPTERTLFVLGSKGVGKSTLINRFL 54 Query: 61 ERDETAKPTLALEYTFGRRARGHNT-PKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 +RD+ +PTLALEY+FGR+ K+I ++WELG + S L+++PI + + S Sbjct: 55 DRDDVPRPTLALEYSFGRKTASGQGAQKNICNVWELGSLANSSQLIEMPIRSHGLQTFSC 114 Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 +++LDLS+P+ LW +ES+L + K G+ K+ + + K++PD Sbjct: 115 IVMLDLSQPDRLWTDLESVLNGLKQATAKHAV----AGQIEEMKELTAQRIGKEHPDLST 170 Query: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 + FP P++IVG K+DI+Q+ DSE RK +C+ LR +AH GA+L++ S+K+ + R Sbjct: 171 LELFPFPIVIVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRD 230 Query: 240 FINQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 +N L FG+ ++ S D S PLAIP G+DS ++IG + IG Sbjct: 231 TMNHLGFGSPSNPFRAASFDHSSPLAIPFGADSWARIGVTPSNSERIGLS---------- 280 Query: 298 KVFEKVFPHESTRERKEL-KDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 F P L DP KD F E ID +R+QKD+EL ++ K Sbjct: 281 --FSTQIPQLPIGNGGILPDDPAKDAGFKEASIDELRSQKDEELMYVLKDTEIRMK 334 >gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A isoform 1 [Pan troglodytes] Length = 472 Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats. Identities = 68/330 (20%), Positives = 121/330 (36%), Gaps = 44/330 (13%) Query: 20 RESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRR 79 RE + + PS G GKT+++ R ++ E K LEY + Sbjct: 4 REGEHETLDPGPAGTRPPS-------GEDGAGKTSLI-RKIQGIEEYKKGRGLEYLYLNV 55 Query: 80 ARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLL 139 + ++W L G + L++ + A ++ V+LV+D+SKP ++++ Sbjct: 56 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWA 115 Query: 140 GSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD----------------------- 176 R V+K+ ++ + R + + D Sbjct: 116 SVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVLP 175 Query: 177 ---RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTS 227 L +P+L+V +K D D+ E I +R YGA+LI+TS Sbjct: 176 LGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTS 235 Query: 228 SKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTL 287 K + +I Q +G + IPAG D+ +IG + TL Sbjct: 236 VKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG---ILHENFQTL 292 Query: 288 HAKNPF-DLWKKVFEKVFPHESTRERKELK 316 A++ F D+ K + F HE ++ + Sbjct: 293 KAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 322 >gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin light chain A [Ornithorhynchus anatinus] Length = 471 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 124/324 (38%), Gaps = 37/324 (11%) Query: 26 EEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNT 85 ++ +H ++ T + G GKT+++ + ++ + K +EY + Sbjct: 1 MALSQAPSSHLLAKGTAWGQGEDGAGKTSLIGK-MQGIDEYKKGRGMEYLYLNVHDEDRD 59 Query: 86 PKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 + ++W L G + L++ + A+++ V+LV+D+SKP ++++ R Sbjct: 60 DQTRCNVWILDGDLYHKGLLKFAMDANSLKDTLVMLVVDMSKPWTALDSLQKWASVVREH 119 Query: 146 VEKVCAALQKTGESRSGKQRVPRVLHKDYPD--------------------------REL 179 ++K+ ++ E R + + D L Sbjct: 120 IDKLKIPPEEMKEMEQKLIRDFQEYIEPGEDFPASPQRRNTTSQEDKDDSVILPLGADTL 179 Query: 180 ISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 +P+L+V +K D D+ E I +R YGA+LI+TS K Sbjct: 180 TYNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKN 239 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 + +I Q +G + IPAG D+ +IG + TL A++ F Sbjct: 240 IDLVYKYIVQKLYGFPFKIPAVVVEKDAVFIPAGWDNDKKIG---ILHENFQTLKAEDSF 296 Query: 294 -DLWKKVFEKVFPHESTRERKELK 316 D+ K + F HE ++ + Sbjct: 297 EDIIIKPPVRKFVHEKEIVAEDDQ 320 >gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein, partial [Gallus gallus] Length = 388 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 64/354 (18%), Positives = 125/354 (35%), Gaps = 47/354 (13%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 +EV +R + PS +T+ +G GKTT++ + + E + Sbjct: 1 SSILSEVSTR-----------SRSKLPSGKTILVLGDNGSGKTTLMAKL-QGAEHGQKGR 48 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + ++W L G I L++ ++A+++ V+ V+D+S+P Sbjct: 49 GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWT 108 Query: 131 LWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVPRVLHKDY-- 174 + E++E G R ++K+ Q+ E Q + Sbjct: 109 VMESLEKWAGVLREHIDKLKIPPEEMRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQ 168 Query: 175 ---------PDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + L +P+L+V +K D + + E I +R Y Sbjct: 169 ENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQY 228 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 GA+LI+TS K E + ++ +G + + IPAG D+ +I Sbjct: 229 GAALIYTSVKGEKNLDLLYKYLVHKMYGFQLTTPALVVEKDAVFIPAGWDNEKKIA---I 285 Query: 280 TEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSI 332 + + + D K + H + ++ +K Q + + Sbjct: 286 LHENFTRVKPGYAYEDFIAKPRVRKLVHTELVTAEADQEFLKRMQSLLAKLPEM 339 >gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon nigroviridis] Length = 400 Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 62/318 (19%), Positives = 119/318 (37%), Gaps = 32/318 (10%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E + + PS + V MG GKTT++ + + + LEY + Sbjct: 6 EVSTHSRSKLPSGKNVLVMGEVGSGKTTLVAKL-QGVDEYMKGRGLEYLYFSVHDDDIDD 64 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 + W L G + L + + D++ +++ +D+S+P ++++ AR + Sbjct: 65 HARCNAWVLDGDLYHKGLQGVAVPVDSIGNTLLLITVDMSRPWNALDSLQKWAAVAREHI 124 Query: 147 EK--------------VCAALQKTGESRSGKQRVPRVLHKDYP-------DRELISPFPV 185 +K + Q+ E SG+ P+ +D D L + Sbjct: 125 DKLRVAPETLRELEHNLVKQFQEYVEPGSGEDGTPQRRSEDEESILLPLGDSTLTHNLGI 184 Query: 186 PLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 P+++V +K D D+ E I LR YGASL++TS K + Sbjct: 185 PVVVVCTKCDAIGTLEKEHDYRDEHLDFIQSHLRRFCLQYGASLVYTSVKEMKNLDILYK 244 Query: 240 FINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKK 298 ++ +G P + IP+G D+ +I + T + + F D+ K Sbjct: 245 YLVHRLYGFPFPCPAQVVERDAVFIPSGWDNEKKIA---ILHENFQTFKSDDTFEDVIVK 301 Query: 299 VFEKVFPHESTRERKELK 316 + HE + ++ + Sbjct: 302 PPVRKIVHEKEIQAEDDQ 319 >gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70877049|gb|EAN90434.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 422 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 105/380 (27%), Positives = 181/380 (47%), Gaps = 41/380 (10%) Query: 1 MPKVSSDTLWDIAAAEV-RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRF 59 MP+V+ D D+ + +RE++ + ++ V +G+ GGKT++L R Sbjct: 50 MPQVTVDPTKDLWQNIILNTRENQVTQ-----------TEVNVLIVGTSGGGKTSLLRRI 98 Query: 60 LERDETA-----------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIP 108 T+ KPT AL+Y+F RR +AH WEL G+ LS L ++ Sbjct: 99 FSGVNTSSSSVPKSFLRVKPTTALDYSFVRR--NDRHIAQVAHFWELAQGMELSQLCEVV 156 Query: 109 ITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRV 166 IT +NV + + +V+D S+P+ +W+T+ + +V ++ ++ G + K R Sbjct: 157 ITPENVHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRA 216 Query: 167 PRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFT 226 R++ ++PD + VP +I+ +K D F + K + +++RF+AH YGA L+FT Sbjct: 217 KRLVGMEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFT 275 Query: 227 SSKSETTMSKSRSFINQLAFGTER-PKSISTD-PSKPLAIPAGSDSLSQIGPPVATEVDI 284 S K R+ +N L F + K I D + + +D+ + IG P +++ Sbjct: 276 SDAEAI---KLRAVMNHLVFVSTFDLKHIELDPERGAVLVIPSADTFADIGEPAVSDMGG 332 Query: 285 GTLHAKNPFDLWKKVFEKVFPHESTRER-------KELKDPVKDPQFSEPLIDSIRAQKD 337 D WK + +FP + + R K L D + F EP +D++R QK+ Sbjct: 333 LQSTGDAELDRWKAPLDAMFPAKQSEGRMQNDSFLKRLYD-TGENGFGEPTVDAVRKQKE 391 Query: 338 QELDQYKREQAKSWKSLALD 357 EL+QY++ K KS D Sbjct: 392 DELEQYRKSAFKREKSTKDD 411 >gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein light intermediate chain 2, partial [Equus caballus] Length = 490 Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 66/348 (18%), Positives = 119/348 (34%), Gaps = 48/348 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 26 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 73 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 74 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 133 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 134 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEPEEGCQGSP 193 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 194 QRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQ 253 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI TS K ++ I S PAG D Sbjct: 254 SHLRRFCLQYGAALIDTSVKEAKSLDLKNKCIIHPTSNDPVTSPGKASQSLFAFRPAGWD 313 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELK 316 + +I + T+ ++ + D K + H+ ++ + Sbjct: 314 NEKKIA---ILHENFTTVKPEDVYEDFIVKPPVRKLVHDKELAAEDEQ 358 >gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 374 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 115/325 (35%), Gaps = 47/325 (14%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 +EV +R + PS +T+ +G GKTT++ + + E + Sbjct: 64 SSILSEVSTR-----------SRSKLPSGKTILVLGDNGSGKTTLMAKL-QGAEHGQKGR 111 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + ++W L G I L++ ++A+++ V+ V+D+S+P Sbjct: 112 GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWT 171 Query: 131 LWETMESLLGSARNQVEKV--------------CAALQKTGESRSGKQRVPRVLHKDY-- 174 E++E G R ++K+ Q+ E Q + Sbjct: 172 AMESLEKWAGVLREHIDKLKIPPEETRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQ 231 Query: 175 ---------PDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + L +P+L+V +K D + + E I +R Y Sbjct: 232 ENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQY 291 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 GA+LI+TS K E + ++ +G + + IPAG D+ +I Sbjct: 292 GAALIYTSVKGEKNLDLLYKYLVHKMYGFQLTTPALVVEKDAVFIPAGWDNEKKIA---I 348 Query: 280 TEVDIGTLHAKNPF-DLWKKVFEKV 303 + + + D K + Sbjct: 349 LHENFTRVKPGYAYEDFIAKPRVRK 373 >gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosophila melanogaster] gi|24641224|ref|NP_727500.1| Dlic2 CG1938-PC, isoform C [Drosophila melanogaster] gi|24641226|ref|NP_727501.1| Dlic2 CG1938-PD, isoform D [Drosophila melanogaster] gi|16182605|gb|AAL13531.1| GH06357p [Drosophila melanogaster] gi|22832089|gb|AAF48011.2| CG1938-PA, isoform A [Drosophila melanogaster] gi|22832090|gb|AAN09288.1| CG1938-PC, isoform C [Drosophila melanogaster] gi|22832091|gb|AAN09289.1| CG1938-PD, isoform D [Drosophila melanogaster] Length = 493 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 70/377 (18%), Positives = 131/377 (34%), Gaps = 54/377 (14%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 + LW EV+++ S PS ++V +G A GKTT++ + + E Sbjct: 26 EKENLWSAILNEVQTQGS-----------TKLPSNKSVLVLGDNATGKTTLIAKL-QGVE 73 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + +W L G ++L+ + N + V+L + Sbjct: 74 DPKKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVS 133 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKT--------------------GESRSGKQ 164 +++P E + + ++ + ++ + S + Sbjct: 134 MTQPWGWLEQLNHWIKVLGQHIDSLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVK 193 Query: 165 RVPRVLHKDYPD------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 R R D D LI+ + +++V +K D ++ E I + + Sbjct: 194 RTMRNNSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWI 253 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R +G SL +TS K + ++ +G + IPAG DSL Sbjct: 254 RNFCLRHGTSLFYTSVKEDKNCDVLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLK 313 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDS 331 +I ++ + A+NP+ D+ K + E + +D Q Sbjct: 314 KIS---ILYENMHGVKAENPYTDIIKSPPTRKAVSNREAEVQ-----TEDEQAFLARQQE 365 Query: 332 IRAQKDQ-ELDQYKREQ 347 I Q DQ + R Q Sbjct: 366 ILKQGDQVRGESPLRSQ 382 >gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoobscura] gi|54643019|gb|EAL31763.1| GA15140-PA [Drosophila pseudoobscura] Length = 499 Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 65/377 (17%), Positives = 127/377 (33%), Gaps = 54/377 (14%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 + LW EV+++ S P+ ++V +G A GKTT++ + + E Sbjct: 28 EKENLWSAILNEVQTQGS-----------TKLPANKSVLVLGDNATGKTTLIAKL-QGVE 75 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + +W L G ++L+ + N + V+L + Sbjct: 76 DPKKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHFALNETNYAHTLVILTVS 135 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL-------------- 170 +++P E + + +E + + +R + Sbjct: 136 MTQPWGWLEQLNHWIKVLGQHIESLPLEAKDKEMARQRLATTWQSYCEVGDDLDPGSPVK 195 Query: 171 ------------HKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 + LI+ + +++V +K D ++ E I + + Sbjct: 196 RTMRNNSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWI 255 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R GASL +TS K + ++ +G + IPAG DSL Sbjct: 256 RSFCLRTGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLK 315 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDS 331 +I ++ + A++P+ D+ K + E + +D Q Sbjct: 316 KIS---ILYENMHGIKAESPYSDVIKAPPTRKAVSNREVEVQ-----TEDEQTFLARQQE 367 Query: 332 IRAQKDQEL-DQYKREQ 347 I Q Q+ + R Q Sbjct: 368 ILKQAGQDRGESPLRSQ 384 >gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, isoform A [Tribolium castaneum] Length = 475 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 57/370 (15%), Positives = 124/370 (33%), Gaps = 54/370 (14%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEED--AHFPSQRTVFFMGSKAGGKTTILLR 58 MP+ + D + + + + PS + V +G GKTTI+ + Sbjct: 1 MPEEVAKPTDDS------KKNLWSQILSDVQNNGNPKLPSCKQVLVLGDNECGKTTIVAK 54 Query: 59 FLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLS 118 + E K LEY + + + +W L G +DL++ + + Sbjct: 55 L-QGVEDPKKGSGLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHTDLLKFALNEETFQHTL 113 Query: 119 VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL-------- 170 V+L + ++ P ++ E ++ + ++K+ + R ++ + Sbjct: 114 VILTVTMTAPWSILEQLQHWASVLADHLDKLKLDVDLRQNRRQHIVKMWQEYVEPGDELD 173 Query: 171 ---------------------HKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSE 203 P+ L + + +++V +K D D+ E Sbjct: 174 PASPMKRSSRNFGDGEDGLEEQTSLPEGTLTNNLGLDIVVVVTKTDYIQTLEKEHDYRDE 233 Query: 204 KRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 + + +R YGA+L +TS+K + ++ +G + Sbjct: 234 HLDFMQQWIRKFCLQYGAALFYTSAKEDKNCDLLYKYLTHRIYGFPFRTPALVVEKDAVF 293 Query: 264 IPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDP 322 IPAG D++++I ++ T + F D+ + + + T +D Sbjct: 294 IPAGWDNMNKI---RILYENLHTCKPDDYFRDIIVQPATRKTINRETELL------AEDE 344 Query: 323 QFSEPLIDSI 332 Q I Sbjct: 345 QAFLARQQQI 354 >gi|157128066|ref|XP_001661298.1| dynein light intermediate chain [Aedes aegypti] gi|108872707|gb|EAT36932.1| dynein light intermediate chain [Aedes aegypti] Length = 494 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 60/359 (16%), Positives = 122/359 (33%), Gaps = 54/359 (15%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD 63 + LW +EV++ + PS ++V +G A GKTT++ + + Sbjct: 26 DPKENLWSAILSEVQT-----------QSSTKLPSNKSVLVLGDNASGKTTLIAKL-QGV 73 Query: 64 ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVL 123 E K LEY + + +W L G ++L++ + N + V+L L Sbjct: 74 EDPKKGSGLEYAYIDVRDEYRDDVTRLGVWILDGDPGHTNLLKYALNETNYAHTLVILTL 133 Query: 124 DLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--------------------SGK 163 ++ P + + +E + + + + ++ + R S Sbjct: 134 SMTTPWSWVDQLEHWIKMLDDHIAGLKIDPEERQQCRQRLVTVWQSYCDTIDELDPGSPI 193 Query: 164 QRVPRVLHKDYPDRELISPFPVPLLIVG-------SKFDIFQ------DFDSEKRKVICK 210 +R R+ D L P V +G +K D D+ E + + Sbjct: 194 KRTNRLSSVDDDLDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQ 253 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGASL +TS K + ++ +G + IPAG D+ Sbjct: 254 WIRRFCLVYGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRTPALIVEKDAVLIPAGWDN 313 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I ++ + + + D+ + + E + ++ Q Sbjct: 314 MKKIN---ILYENMQSCKPDDYYNDIIAQPPSRKTVSNREIEVQ-----TEEEQAFLSR 364 >gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melanogaster] gi|22946025|gb|AAF52775.2| CG3769-PA [Drosophila melanogaster] gi|66770889|gb|AAY54756.1| IP11319p [Drosophila melanogaster] Length = 368 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 19/347 (5%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 + ++ ++ DIA R + + + E P +RT+ +GSK GKTT + +F +R Sbjct: 26 ESATPSIQDIAG-----RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 Query: 63 DET-AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 +E +PTLALEY+FGRR +P+ ++WELG + L+++P+ + L+V+L Sbjct: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELIS 181 +LDLS+P W +E R+ +++ + +QR + + D E + Sbjct: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL-REILEQRTVERVGQQNKDSEKLD 198 Query: 182 PFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFI 241 P P P++IVG K+D+F FD RK C+ LR +AH G +L+F S K R I Sbjct: 199 PLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI 258 Query: 242 NQLAFGTE--RPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKV 299 L FG+ +S D ++PL I G+DS S+IG A V+ + A ++ + Sbjct: 259 CHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQLQ 316 Query: 300 FEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 EK + KE DP KDP F E +ID IR+QK++EL R+ Sbjct: 317 LEKQ-------KLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRD 356 >gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated family member (xbx-1) [Caenorhabditis elegans] gi|77799271|emb|CAB01645.2| Hypothetical protein F02D8.3 [Caenorhabditis elegans] Length = 370 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 122/355 (34%), Positives = 204/355 (57%), Gaps = 21/355 (5%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHF------------PSQRTVFFMGSKAGGKTTI 55 +WD+A ++ + R E + + +D + + + F G++ GK++ Sbjct: 2 NIWDLAKQKLVENKQRAAELKQKLDDENGTQSDNYLSEVRRRHESHIIFAGNRKSGKSSF 61 Query: 56 LLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVS 115 +L FLER E K ++ LEYT+ RR RG KDIA+LWELGGG ++++L+ +PIT NV Sbjct: 62 MLNFLERKEDLKDSVGLEYTYARRTRG--NVKDIANLWELGGGATVTELLSVPITMKNVE 119 Query: 116 FLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP 175 S++L+LD++ + +W T+E + S R V + ++R ++ R+ D Sbjct: 120 ICSLILLLDMTNLDEMWITIEKTVDSVRRLV-ENLERQDINLQTRLAEKMRLRLEKYDDG 178 Query: 176 DRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMS 235 ++ +P P+P+ IV SK+D FQ+F+SEKR+ +C+ LRFLA+ YGA+L+ SS+ E Sbjct: 179 SLKMCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPK 238 Query: 236 KSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDL 295 ++ + AFGT P+ TD +KP+ + G DSL IG P A++ +G A +PF+L Sbjct: 239 LVKNMTSHFAFGTVCPQGYMTDHNKPMFVKCGFDSLESIGIPPASDNFMG---ASSPFNL 295 Query: 296 WKKVFEKVFPHES---TRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 W++ F ++P ++ E + +DP+ DP F EP ID++ K +EL + R + Sbjct: 296 WRESFISLWPQKTGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKELKNHIRSK 350 >gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938-PA, isoform A [Apis mellifera] Length = 470 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 122/369 (33%), Gaps = 64/369 (17%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 + D LW AEV PS + + +G GKTT++ + + Sbjct: 23 PENKDNLWSSILAEV-----------QNSSSNKLPSNKNILVLGDNESGKTTLIAKL-QG 70 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LE+ + + + +W L G ++L++ + A+ V+LV Sbjct: 71 VEDPKKGSGLEFAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLRFALNAERFPHTLVMLV 130 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK---------- 172 ++ P A+ + ++S + ++K+ R + + + Sbjct: 131 AAMTTPWAILDQLQSWAALLGDHIDKLPLDNDTWQRCRQLNVKKWQDYTEPGDELDPGSP 190 Query: 173 ----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 P+ L + + +++V +K D D+ E I + Sbjct: 191 LRRTSRNLDDDTMDNLPLPEGVLTTNLGLDVVVVITKTDYMSTLEKEHDYKDEHFDFIQQ 250 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA L +TS+K + ++ + + IPAG D+ Sbjct: 251 WIRRFCLQYGAGLFYTSAKEDKNCDLLYKYLTHRIYSLPFRTPALVVEKDAVLIPAGWDN 310 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKV----------------FPHESTRERK 313 + +I ++ ++ + + D+ + F + Sbjct: 311 MKKIS---ILHENLQSMKPDDYYRDVIAQPSINRKCVAREVEVQAEEEQAFLAKQQAALL 367 Query: 314 ELKDPVKDP 322 +KDP + P Sbjct: 368 GVKDPTRSP 376 >gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] Length = 433 Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 54/302 (17%), Positives = 109/302 (36%), Gaps = 34/302 (11%) Query: 45 MGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDL 104 MG GKTT++ + + E LEY + + + W L G + L Sbjct: 1 MGEVGSGKTTLVAKL-QGVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGL 59 Query: 105 VQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR---- 160 + I+ +N+ ++ V+DLS+P ++++ R+ V+K+ + E Sbjct: 60 QKFAISLENLEDSLILFVVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLT 119 Query: 161 -------------------SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIF---- 197 + + + L +P+++V +K D Sbjct: 120 KQFQEYVEPGSDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLE 179 Query: 198 --QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 D+ E I +R YGA+L++TS K + ++ +G Sbjct: 180 KEHDYKDEHLDFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQ 239 Query: 256 TDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKE 314 + IP+G D+ +I + + A++ F D+ K + F HE + ++ Sbjct: 240 VVEKDSVFIPSGWDNEKKIA---ILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAED 296 Query: 315 LK 316 + Sbjct: 297 DQ 298 >gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] Length = 358 Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats. Identities = 109/323 (33%), Positives = 168/323 (52%), Gaps = 14/323 (4%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET-AKPTLALEYTFGRRARGHNT 85 + E P +RT+ +GSK GKTT + +F +R+E +PTLALEY+FGRR + Sbjct: 35 LLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS 94 Query: 86 PKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 P+ ++WELG + L+++P+ + L+V+L+LDLS+P W +E R+ Sbjct: 95 PQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDT 153 Query: 146 VEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKR 205 +++ + +QR + + D E + P P P++IVG K+D+F FD R Sbjct: 154 AQQMMEKVTPEL-REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIR 212 Query: 206 KVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTE--RPKSISTDPSKPLA 263 K C+ LR +AH G +L+F S K R I L FG+ +S D ++PL Sbjct: 213 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 272 Query: 264 IPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQ 323 I G+DS S+IG A V+ + A ++ + EK + KE DP KDP Sbjct: 273 IWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQLQLEKQ-------KLKETTDPAKDPG 323 Query: 324 FSEPLIDSIRAQKDQELDQYKRE 346 F E +ID IR+QK++EL R+ Sbjct: 324 FKELVIDEIRSQKNEELAGLMRD 346 >gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella vectensis] gi|156225136|gb|EDO45956.1| predicted protein [Nematostella vectensis] Length = 422 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 120/338 (35%), Gaps = 40/338 (11%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKD 88 PS +++ +G+ GKTT++ + +++ LEYT+ Sbjct: 8 QSSASRKLPSHKSIILIGNDESGKTTLISKLRGKEDDISKGHGLEYTYLEVHDEEIDDYT 67 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 ++W L G L++ +T + + VV+V+D S+P A+ E++ S R + Sbjct: 68 RLNVWILDGDPRNKSLLKYALTPKHARDVLVVMVVDCSRPWAIMESLHSWTEILREHIHS 127 Query: 149 VCAALQKTGESRSGKQRVPRVLH----------------------KDYPDRELISPFPVP 186 + + ++ E + + + L+ +P Sbjct: 128 LKLSPKELNEMEEKIVQQFQDYTDTEEASDENRRRSGTKDEDKVVLPLEENVLVDNLGIP 187 Query: 187 LLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 ++++ +K D +DF E I + +R +GA+L +TS K + + Sbjct: 188 MIVLVTKTDCMLSLEKDRDFHDEHFDFIQQHIRRYCLKHGAALFYTSVKENKNCNLFLKY 247 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDL-WKKV 299 + +G + IP+G DS+ +IG + +H + FD K Sbjct: 248 VLHKIYGLPFKSPALVVDKDSVFIPSGWDSMKKIG---ILNEHLKNIHPDDSFDDHIIKP 304 Query: 300 FEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKD 337 + E ++ Q + QK+ Sbjct: 305 ALRKPLQEKEIT-------AEEEQAFLAKQQQL-LQKN 334 >gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae str. PEST] gi|157018577|gb|EAA06916.4| AGAP000723-PA [Anopheles gambiae str. PEST] Length = 470 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 56/336 (16%), Positives = 114/336 (33%), Gaps = 43/336 (12%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTP 86 E + + PS ++V +G A GKTT++ + + E K LEY + + Sbjct: 6 EVQTQSNTKLPSNKSVLVLGDNASGKTTLIAKL-QGVEDPKKGSGLEYAYIDVRDEYRDD 64 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 +W L G ++L++ + N V+L L ++ P + + ++ + + + Sbjct: 65 VTRLSVWILDGDPGHNNLLKFALNEQNFPHTLVILTLSMTTPWSWVDQLQHWMKILDDHI 124 Query: 147 EKVCAALQKTGES--------------------RSGKQRVPRVLHKDYPDRELISPFPVP 186 + ++ + S +R R+ D L P V Sbjct: 125 AGLKIDPEEKQQCQARLTTEWQNYCETIDDLDPGSPIKRTNRLPSVDDELDALPLPEGVL 184 Query: 187 LLIVG-------SKFDIFQ------DFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 +G +K D D+ E + + +R YGASL +TS K + Sbjct: 185 TTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQWIRRFCLMYGASLFYTSVKEDKN 244 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 ++ +G + IPAG D++ +I ++ + + + Sbjct: 245 CDLLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDNMKKIS---ILYENMQSCKPDDYY 301 Query: 294 -DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 D+ + + E + +D Q Sbjct: 302 NDIIAQPPSRKTVSNRESEIQ-----TEDEQSFLAR 332 >gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 3 [Canis familiaris] Length = 225 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 130/225 (57%), Positives = 167/225 (74%), Gaps = 3/225 (1%) Query: 135 MESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPFPVPLLIVGS 192 ME+LL + ++ V+K+ L KT +Q++ + KD+PDREL+ PF +PL+I+GS Sbjct: 1 MENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIPLVIIGS 60 Query: 193 KFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 K+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R INQLAFG ++ K Sbjct: 61 KYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKVRGVINQLAFGIDKSK 119 Query: 253 SISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRER 312 SI D +KPL I AG DSLSQIG P + DIG LHA +P DLWKKV+E+VFP +ST Sbjct: 120 SICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVFPPKSTNTL 179 Query: 313 KELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 180 KHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWKQIELD 224 >gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] gi|39583371|emb|CAE66345.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] Length = 366 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 111/355 (31%), Positives = 195/355 (54%), Gaps = 25/355 (7%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHF------------PSQRTVFFMGSKAGGKTTI 55 +WD+A ++ + R E E + +D + + + G++ I Sbjct: 2 NIWDLAKQKLVENKQRAAELEQKLDDENGAVNDNYLAEVRRRHESHIIIAGNRQI----I 57 Query: 56 LLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVS 115 + E + LE+T+ RR RG KD+A+LWELGGG S+++L+ +PITA NV Sbjct: 58 IHVEFSGAERRFERIGLEFTYARRTRG--NVKDVANLWELGGGSSVTELLSVPITAKNVE 115 Query: 116 FLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP 175 S++++LD++ + +W T+E + + R V + ++R ++ R+ + Sbjct: 116 TCSLIVLLDMTNLSEMWITIEKTVDTVRRLV-ENLERQDANLQTRMAEKSRLRLEKYESS 174 Query: 176 DRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMS 235 ++ +P P+P+ IV +K+D FQ+F+SEKR+ +C+ LRFLA+ YGA+L+ SS+ E Sbjct: 175 SLKMCAPCPLPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPK 234 Query: 236 KSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDL 295 ++ I+ AFGT P+ TD +KP+ I G D+L IG P ++ +G A +PF+L Sbjct: 235 LVKNMISHFAFGTVCPQGYITDHNKPMFIKCGFDNLEAIGIPPGSDNFMG---ASSPFNL 291 Query: 296 WKKVFEKVFPHESTR---ERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 W++ F ++P ++ E + +DP+ DP F EP ID++ K +EL+ + R + Sbjct: 292 WRESFISLWPQKTGNVDVEDTKKQDPMIDPVFKEPSIDNLVEIKRKELENHIRSK 346 >gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00000001598 [Nasonia vitripennis] Length = 486 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 59/362 (16%), Positives = 124/362 (34%), Gaps = 57/362 (15%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 D LW A+V + PS + V +G GKTT++ + + E Sbjct: 28 DNLWSSILAQV-----------QNSSNNKLPSNKNVLVLGDNESGKTTLIAKL-QGVEDP 75 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K LEY + + + +W L G ++L++ + A V+LV ++ Sbjct: 76 KKGSGLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLKFALNAKRFPNTLVMLVAAMT 135 Query: 127 KPNALWETMESLLGSARNQVEKVCAAL----QKTGESRSGKQRVPRVLHK---------- 172 P AL + ++ + ++K+ + Q + R ++ + + Sbjct: 136 TPWALLDQLQFWSRVLGDHIDKLASDNDDFKQTWQDCRQQIKKKWQDYTEPGDDLDPGSP 195 Query: 173 ----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 PD L + + +++V +K D D+ E + + Sbjct: 196 LRRTSRNLDDESVDNLPLPDGVLTTNLGLDIVVVITKTDYMSTLEKEHDYRDEHFDFMQQ 255 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA L +TS K + ++ + + IPAG D+ Sbjct: 256 WIRRFCLQYGAGLFYTSVKEDKNCDLLYKYLTHRIYSLPFRTPALVVEKDAVLIPAGWDN 315 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 + +I ++ ++ + + D+ K P +++++ +D Q Sbjct: 316 MKKIS---ILHENLQSMKPDDYYRDVIVKP-----PSNRKSVQRQVEVQTEDEQAFLTRQ 367 Query: 330 DS 331 Sbjct: 368 QE 369 >gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chain [Rattus norvegicus] gi|50927372|gb|AAH79201.1| Dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 311 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 156/279 (55%), Positives = 193/279 (69%), Gaps = 15/279 (5%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R + + E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRRCHGSDGDGME-----IGEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L K +QR+ V+ KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVTMKLGKANSKASSEMRQRMWSVMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKMR 231 Query: 239 SFINQLAFGTERP----KSISTDPSKPLAIPAGSDSLSQ 273 INQLAFG ++ S S+ +P S Sbjct: 232 GVINQLAFGIDKRYWYIFSNQFPRSRVSCLPPPLSSACD 270 >gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_b [Mus musculus] Length = 458 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 62/366 (16%), Positives = 112/366 (30%), Gaps = 89/366 (24%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR G + IPAG D Sbjct: 256 AHLRRFCLQC-------------------------ILGM---------LKDAVFIPAGWD 281 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 282 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 331 Query: 329 IDSIRA 334 S+ A Sbjct: 332 QQSLLA 337 >gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Trypanosoma brucei TREU927] gi|70835124|gb|EAN80626.1| dynein light intermediate chain, putative [Trypanosoma brucei] Length = 418 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 92/375 (24%), Positives = 161/375 (42%), Gaps = 39/375 (10%) Query: 3 KVSSDTLWDIAAAEV-RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL- 60 ++ D D+ ++E+ + S+ +F +G GKT+++ R Sbjct: 57 QIVVDPTKDLWQNIALNTKENNLPQ-----------SEANLFVVGCSGAGKTSVIQRVCS 105 Query: 61 ----------ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPIT 110 + KPT AL+Y + R+ H WEL G+ LS L ++ IT Sbjct: 106 AIGAGGNTSGKGKTKVKPTTALDYQYTTRS--DRHVSQTVHFWELAQGMELSQLCEVVIT 163 Query: 111 ADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT--GESRSGKQRVPR 168 +NV + + +V+D S P+++W+T+ L + ++ ++ R R Sbjct: 164 PENVHLMHIAIVVDFSDPSSMWDTLAYWLKRVDRRANEILQKMRAKGSNTPDKLHARAQR 223 Query: 169 VLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSS 228 L + +PD + + +P +IV +K D F E+ K + + LRF+AH YGA L+F+S Sbjct: 224 ALGEGHPDLKRVRLSGLPTVIVCNKVDAFPG-PMEQMKTLTRCLRFIAHLYGAYLVFSSD 282 Query: 229 KSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPV-ATEVDIG-- 285 + + + L R + + L +P D+ IG P G Sbjct: 283 ADSAKLRLLLNHLLFLTPFDARQVELDVERGTILIMPEN-DTFVDIGDPPLCDGPSGGPV 341 Query: 286 -TLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVK------DPQFSEPLIDSIRAQKDQ 338 + D WK + +FP ++ R + +K + F EP ID+IR QKD+ Sbjct: 342 TQSTGDSELDRWKVPLDAMFPPKAGGGRAQSDAMLKRLYDMGEGGFGEPTIDTIRRQKDE 401 Query: 339 ELDQYKREQAKSWKS 353 EL+QY++ A+ K Sbjct: 402 ELEQYRKSAARRDKG 416 >gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_a [Rattus norvegicus] Length = 455 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 112/366 (30%), Gaps = 92/366 (25%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCA--------------ALQKTGESRSGKQRVP 167 V D+S+P + E+++ R ++K+ Q E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSP 195 Query: 168 RVLHK------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR + + IPAG D Sbjct: 256 AHLRGFC-------------------------------------LQFVEKDAVFIPAGWD 278 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 279 NEKKIA---ILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 328 Query: 329 IDSIRA 334 S+ A Sbjct: 329 QQSLLA 334 >gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974436|ref|XP_001184479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 483 Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 119/366 (32%), Gaps = 58/366 (15%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW E + + PS +++ +G GKTT+L R + Sbjct: 20 DDEPQNLWTSIL-----------SEVSSHSSSKLPSCKSILVLGEDETGKTTLLSRL-QG 67 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + +W L G DL++ +TADN+ + V++ Sbjct: 68 VEDPKKGYGLEYLYLDVRDEDRDDTTRCGVWILAGENEHEDLLRYALTADNLEHMLVIIA 127 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------- 175 +D+ +P + ++++ R V+ + +K E + + + Sbjct: 128 VDMCRPWNIMDSLQKWTQVIRRHVDSLRIPPEKLRELEQRLVQQFQAYTEPETGQDSSVT 187 Query: 176 -----------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRK 206 + L VP+++V +K D QD+ E Sbjct: 188 RRTSGVTKPTGAEDEEAVVLPLGETTLTHNLGVPIVVVVTKSDYVNTLEKEQDYSDEHLD 247 Query: 207 VICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA 266 + + +R YGA+L + S K ++ + + L +P+ Sbjct: 248 FLQQNVRKFCLNYGAALFYVSVKENKNCDLLNRYLLHRLYDFPFNSAALVVEKDALFVPS 307 Query: 267 GSDSLSQIGPPVATEVDIGTLHAKNPFDL-WKKVFEKVFPHESTRERKELKDPVKDPQFS 325 G D+L ++ ++ + + P+D K + + +D Q Sbjct: 308 GWDNLQKVS---ILYENMANIDPEKPYDEVIIKPVVRRLLQ--DNKEII----AEDEQVF 358 Query: 326 EPLIDS 331 + Sbjct: 359 LMKQQA 364 >gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermediate chain [Tetrahymena thermophila] Length = 474 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 100/346 (28%), Positives = 170/346 (49%), Gaps = 22/346 (6%) Query: 14 AAEVRSRESRTDEEEAEEEDAHF------PSQRTVFFMGSKAGGKTT---ILLRFLERDE 64 EV + + + E++ ++T+ +G K GKTT IL + D+ Sbjct: 12 NNEVNKGDRSNIDLWSHAEESELKQGFAKNLEKTLVVIGDKGSGKTTFVNILKNMQQVDD 71 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 PT+ L+Y + RR + K++ H +ELGGG S ++ IPI+ N +LVLD Sbjct: 72 RYIPTVGLDYQYVRRTNANR--KELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLD 129 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQ---KTGESRSGKQRVPRVLHKDYPDRELIS 181 LSKP+ + E+ R Q+++ + + RS + + + +PD+ + Sbjct: 130 LSKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQARFESHPDKNRVK 189 Query: 182 PFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFI 241 P+ +++G K+D+F+ DSE RK + +TLR+LAH GASL F SSK+ RS + Sbjct: 190 ILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSKNNDLFQNVRSIM 249 Query: 242 NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFE 301 N FG + ++ +P+ I D L+++G P + + +KKV + Sbjct: 250 NNALFGKTLAQYYQSEHLRPIEISLSKDELAKMGLPQISGNM-------TYLEAFKKVIQ 302 Query: 302 KVFPHESTRERKELKDPVK-DPQFSEPLIDSIRAQKDQELDQYKRE 346 + FP + +DP++ +F E IDSIRA+KD+E+ +E Sbjct: 303 ETFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKE 348 >gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoobscura] gi|54645577|gb|EAL34315.1| GA17674-PA [Drosophila pseudoobscura] Length = 368 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 105/349 (30%), Positives = 176/349 (50%), Gaps = 22/349 (6%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 ++ ++ DIA R + + + E P +RT+ +GSK GK+T + +F +R Sbjct: 26 DNATPSIQDIAG-----RLAEEQQRLRQLEATSMPKERTLLVLGSKCVGKSTAINKFFDR 80 Query: 63 DETA-KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 +E +PTLALEY+FGRR +P+ ++WELG + L+++P+ + L+V + Sbjct: 81 EEHTTRPTLALEYSFGRRIGSGRSPQV-INVWELGSLDNADQLLEVPMRTHGLQQLAVFI 139 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELIS 181 ++DLS+P W +E R +++ A + ++ + RV H++ D + Sbjct: 140 MVDLSQPQRFWTDLECAYKGLRVTSQELLARMTPELRETLEQRTLERVGHQNKEDLGTLE 199 Query: 182 PFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFI 241 P P++IVG K+D+F D +K IC+ LR +AH G +L+F S K R I Sbjct: 200 LLPFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGALLFYSQKVPKLSKVLRDTI 259 Query: 242 NQLAFGTER--PKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKV 299 + + FG+ +S TD ++PL++ G+DS S+IG A + Sbjct: 260 SHMGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDTGAQS-----------VERIGAT 308 Query: 300 FEKVFP--HESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 F P + ++ +DP KDP F E LID +RAQK++EL R+ Sbjct: 309 FGVAVPQLQLEKQLQQVPQDPAKDPGFKESLIDEMRAQKNEELATIMRD 357 >gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 233 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 113/214 (52%), Positives = 147/214 (68%), Gaps = 1/214 (0%) Query: 144 NQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSE 203 ++ C+ L + + DRELI PFP+PL+I+GSK+DIFQDFD E Sbjct: 20 QHAKRHCSLLGTGWRNLLAGLNQHTNHSRHLKDRELIDPFPIPLVIIGSKYDIFQDFDPE 79 Query: 204 KRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 KRKVICKTLRF+AH+YGASL+FTS KSE + K R INQLAFG ++ KSI D +KPL Sbjct: 80 KRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVINQLAFGIDKSKSICVDQNKPLF 138 Query: 264 IPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQ 323 I AG DSL QIG P + DIG L A +P +LWKKV++K+FP +ST K ++DP +DPQ Sbjct: 139 ITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLFPPKSTGTLKAVQDPARDPQ 198 Query: 324 FSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 ++E +D +R QKDQEL+ YKR +K+WK + LD Sbjct: 199 YAESEVDEMRVQKDQELEHYKRSSSKTWKQIELD 232 >gi|146097038|ref|XP_001468017.1| dynein light intermediate chain [Leishmania infantum JPCM5] gi|134072383|emb|CAM71091.1| dynein light intermediate chain, putative [Leishmania infantum] Length = 424 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 98/371 (26%), Positives = 173/371 (46%), Gaps = 40/371 (10%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLR-FLER 62 + D D+ +R + E E + +G+ GKTT+L R + Sbjct: 65 IVIDPTKDLWQNI--TRNIKDANVEQTETS--------LVMVGASGSGKTTLLHRIYTSF 114 Query: 63 DETA--------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNV 114 ++ K T AL+Y+F RR+ +AH WE+ G S L+ I +T +NV Sbjct: 115 QSSSSGSGPKRVKATTALDYSFARRS--ERNVAPVAHFWEIAQGTQFSQLLDIVLTPENV 172 Query: 115 SFLSVVLVLDLSK---PNALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRVPRV 169 ++ +V+D S+ P + WET L +V + ++ G + K R + Sbjct: 173 HAVAAAVVVDASEEGLPVS-WETATYWLRRLDQRVSDISQRMKAKGSTTPAKILTRAQKA 231 Query: 170 LHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSK 229 + D+PD + + +P ++V +K D F+ D ++ K++C+++R+LAH YGA ++FTS + Sbjct: 232 IGLDHPDLKRMRLSGIPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQ 290 Query: 230 SETTMSKSRSFINQLAFGTER-PKSISTD-PSKPLAIPAGSDSLSQIGPPVATEVDIGTL 287 + R+ +N F PK + TD + + DS IG P + + Sbjct: 291 ESV---RWRALMNFTLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGDPDVSRLGGSVS 347 Query: 288 HAKNPFDLWKKVFEKVFPHESTRERKELKDP-------VKDPQFSEPLIDSIRAQKDQEL 340 D WK F++ FP + E K + DP + F +P+ID++R QKD+EL Sbjct: 348 TGDAELDRWKAPFDEAFPPKKLNEDKVMDDPFIRRLYDTAEGGFGDPVIDALRKQKDEEL 407 Query: 341 DQYKREQAKSW 351 +QY+++ + + Sbjct: 408 EQYRKKSSNAA 418 >gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00000012631 [Nasonia vitripennis] Length = 357 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 101/347 (29%), Positives = 180/347 (51%), Gaps = 18/347 (5%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 T D A + D + D ++++ +GS+ GKTT++ RFLE+++T K Sbjct: 6 TNQDNARELALQASIQEDT--QRKTDPEESHEKSLIILGSREVGKTTMIYRFLEKEDTPK 63 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGG--GISLSDLVQIPITADNVSFLSVVLVLDL 125 PTLA++Y++GR+A G + KD+ H+WE+G +S ++ + + +V+++LDL Sbjct: 64 PTLAMDYSYGRKA-GKSLVKDVVHVWEVGHLAPSLISGSMRGCTLSHSAHHTTVLIMLDL 122 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRE--LISPF 183 KP+ LW ++E L + R + + + R K R R K + E + PF Sbjct: 123 GKPDVLWNSLEECLVAVR-AAMMMSYQQELVHDLRERKIRYLRERAKPGTEDEPPVDDPF 181 Query: 184 PVPLLIVGSKFDIFQDFDS-EKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 P+ L ++G K+D F++ S + ++ I + LR AH GA L + S+K + +++ ++ Sbjct: 182 PMRLCLIGGKYDEFRELHSGDDKESIGQALRAAAHVLGAGLHYHSAKDSHLLRRTKELLS 241 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 F + K+ TD KPL++ AGSDS S I ++ T D K+++ + Sbjct: 242 HYGFKGQSTKASVTDYDKPLSVAAGSDSFSAIDLKISRNDYAVT------LDEIKQIYVR 295 Query: 303 VFPHESTRER---KELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 FP + ++ DP DP F+EP++D +R Q++QE+ R+ Sbjct: 296 RFPQVPKNQDVLPGDMDDPANDPNFNEPIVDRLRLQREQEISVLLRD 342 >gi|114675154|ref|XP_001147785.1| PREDICTED: similar to GTP-binding protein RAB11B [Pan troglodytes] Length = 348 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 142 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 199 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 200 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 248 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 249 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 273 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 274 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISV 330 Query: 277 PVATE 281 P T+ Sbjct: 331 PPTTD 335 >gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] gi|89300006|gb|EAR97994.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] Length = 487 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 99/359 (27%), Positives = 171/359 (47%), Gaps = 35/359 (9%) Query: 14 AAEVRSRESRTDEEEAEEEDAHF------PSQRTVFFMGSKAGGKTT---ILLRFLERDE 64 EV + + + E++ ++T+ +G K GKTT IL + D+ Sbjct: 12 NNEVNKGDRSNIDLWSHAEESELKQGFAKNLEKTLVVIGDKGSGKTTFVNILKNMQQVDD 71 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 PT+ L+Y + RR + K++ H +ELGGG S ++ IPI+ N +LVLD Sbjct: 72 RYIPTVGLDYQYVRRTNANR--KELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLD 129 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQ---KTGESRSGKQRVPRVLHKDYPDRELIS 181 LSKP+ + E+ R Q+++ + + RS + + + +PD+ + Sbjct: 130 LSKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQARFESHPDKNRVK 189 Query: 182 PFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTM------- 234 P+ +++G K+D+F+ DSE RK + +TLR+LAH GASL F SS ++ + Sbjct: 190 ILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSNTQIHVLFNQHNK 249 Query: 235 ------SKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLH 288 RS +N FG + ++ +P+ I D L+++G P + Sbjct: 250 RNNDLFQNVRSIMNNALFGKTLAQYYQSEHLRPIEISLSKDELAKMGLPQISGNM----- 304 Query: 289 AKNPFDLWKKVFEKVFPHESTRERKELKDPVK-DPQFSEPLIDSIRAQKDQELDQYKRE 346 + +KKV ++ FP + +DP++ +F E IDSIRA+KD+E+ +E Sbjct: 305 --TYLEAFKKVIQETFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKE 361 >gi|73987203|ref|XP_854399.1| PREDICTED: similar to RAB11B, member RAS oncogene family [Canis familiaris] Length = 410 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 44/261 (16%), Positives = 82/261 (31%), Gaps = 59/261 (22%) Query: 29 AEEEDAHFPSQRT-----VFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRAR 81 A + P + + +G GK+ +L RF + +K T+ +E+ Sbjct: 188 AVSQPKRQPREVKTYLLRLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 247 Query: 82 GHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLG 140 T K +W+ G IT+ +LV D++K +E +E L Sbjct: 248 DGKTIKA--QIWDTAGQERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLK 299 Query: 141 SARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDF 200 R+ + +++VG+K D+ Sbjct: 300 ELRDHADSNIV-----------------------------------IMLVGNKSDLRH-- 322 Query: 201 DSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSK 260 R V R A S I TS+ T + ++ I + K I+ + Sbjct: 323 ---LRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DR 376 Query: 261 PLAIPAGSDSLSQIGPPVATE 281 + +++ I P T+ Sbjct: 377 AAHDESPGNNVVDISVPPTTD 397 >gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, member RAS oncogene family [Macaca mulatta] Length = 304 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 79/250 (31%), Gaps = 54/250 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 100 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 157 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 158 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 206 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 207 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 231 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K +S D + P+ ++ I Sbjct: 232 EKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHV 288 Query: 277 PVATEVDIGT 286 P TE Sbjct: 289 PPTTENKPKV 298 >gi|157874331|ref|XP_001685649.1| dynein light intermediate chain, putative [Leishmania major] gi|68128721|emb|CAJ08854.1| dynein light intermediate chain, putative [Leishmania major] Length = 425 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 98/364 (26%), Positives = 164/364 (45%), Gaps = 39/364 (10%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLR-FLER 62 + D D+ +R + E E + +G+ GKTT+L R + Sbjct: 65 IVIDPTKDLWQNI--TRNVKDANVEQTETS--------LVVVGASGSGKTTLLHRIYTSF 114 Query: 63 DETA--------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNV 114 + K T AL+Y+F RR+ +AH WE+ G S L+ I +T +NV Sbjct: 115 QSNSSGSGPKRVKATTALDYSFARRS--ERNVAPVAHFWEIAQGTQFSQLLDIVVTPENV 172 Query: 115 SFLSVVLVLDLSKPN--ALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRVPRVL 170 + +V+D S+ WET L +V + ++ G + K R + + Sbjct: 173 HAVVAAVVVDASEEGLPVAWETATYWLRRLDQRVSDISQRMKAKGSTTPAKILTRAQKAI 232 Query: 171 HKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKS 230 D+PD + + VP ++V +K D F+ D ++ K +C+++R+LAH YGA ++FTS + Sbjct: 233 GLDHPDLKRMRLSGVPTVLVINKIDAFRR-DMQQLKFLCRSMRYLAHLYGAHVVFTSEQE 291 Query: 231 ETTMSKSRSFINQLAFGTER-PKSISTD-PSKPLAIPAGSDSLSQIGPPVATEVDIGTLH 288 + R+ +N F PK + TD + + DS IG P + + Sbjct: 292 SV---RWRALMNFTLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGDPDVSRLGGSAST 348 Query: 289 AKNPFDLWKKVFEKVFPHESTRER-KELKDP-------VKDPQFSEPLIDSIRAQKDQEL 340 D WK F++ FP + E K + DP + F +P+ID++R QKD+EL Sbjct: 349 GDAELDRWKAPFDEAFPPKKLNEEGKVVDDPFIRRLYDTSEGGFGDPVIDALRKQKDEEL 408 Query: 341 DQYK 344 +QY+ Sbjct: 409 EQYR 412 >gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 light intermediate chain [Apis mellifera] Length = 345 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 114/343 (33%), Positives = 185/343 (53%), Gaps = 25/343 (7%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 + S + + DIA EE+ + + + +R++ +GSK GKTTI+ RFLE+ Sbjct: 4 QNSEENVRDIALRFCLE------EEQRRKTNPNETHERSIIIVGSKRVGKTTIVHRFLEK 57 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNV----SFLS 118 DE KPT+A++Y+FGR+A G + K+I H+WE+G S LV +T ++ ++ Sbjct: 58 DEAPKPTIAMDYSFGRKA-GKSLIKNIVHVWEVGHLTS--SLVSAAMTGSSLTHSPHHVT 114 Query: 119 VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRE 178 ++++LDLS+P LW T E L RN + + KQR+ + Sbjct: 115 ILVILDLSQPEILWTTFEEALSVVRNA---MKMSYDDKIIQELKKQRIKERKKIVEKE-- 169 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 I PFP+ L +G K+D F+D D +K++++ KTLR +AH GASL + S+K ++ + + + Sbjct: 170 -IDPFPMRLCFIGGKYDQFKDLDLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIK 228 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 ++ FGT+ TD KPLAI AG+DS S I ++ D K+ Sbjct: 229 DLLSYYGFGTQFSDIKCTDFEKPLAISAGTDSFSSI------DLQFPQTRPSAMLDTIKQ 282 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELD 341 ++ P ES L+DP DP F+EP+ID +R Q+++E++ Sbjct: 283 IYVTHIPQESRSNEIILEDPSNDPNFNEPIIDRLRTQREEEIN 325 >gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] Length = 218 Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K + +P + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMV---DRPGHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|149426497|ref|XP_001518037.1| PREDICTED: similar to rab11, partial [Ornithorhynchus anatinus] Length = 331 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 79/248 (31%), Gaps = 54/248 (21%) Query: 42 VFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 129 LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQE 186 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 IT+ +LV D++K +E +E L R+ + Sbjct: 187 RYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------- 233 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ R V R A Sbjct: 234 ----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAEK 260 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPV 278 G S I TS+ T + + I + K +S D + P+ ++ I P Sbjct: 261 NGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHVPP 317 Query: 279 ATEVDIGT 286 TE Sbjct: 318 TTENKPKV 325 >gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966] Length = 213 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 86/262 (32%), Gaps = 56/262 (21%) Query: 31 EEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKD 88 ++++ V +G GK+ +L RF + ++ T+ +E+ R+ + Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFA--TRSINVDGKTI 59 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVE 147 A +W+ G IT+ +LV D++K + + L R+ + Sbjct: 60 KAQIWDTAGQERYR-----AITSAYYRGAVGALLVYDIAKHSTYVN-VSRWLKELRDHAD 113 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 +++VG+K D+ R V Sbjct: 114 SNIV-----------------------------------VMLVGNKSDLRH-----LRAV 133 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + + A S I TS+ + + ++ I + K++ + + P+G Sbjct: 134 PTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSSDD--VIKPSG 191 Query: 268 SDSLSQIGPPVATEVDIGTLHA 289 ++ I +T+ T Sbjct: 192 GET---ISVQPSTDDGGQTKKG 210 >gi|149692307|ref|XP_001496560.1| PREDICTED: similar to rab11 [Equus caballus] Length = 255 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 52/281 (18%), Positives = 85/281 (30%), Gaps = 54/281 (19%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--A 66 LW AE S S + +G GK+ +L RF + + Sbjct: 20 LWQGKNAEWTFLPSDQSAVFTSLSTPTPISSLVIVLIGDSGVGKSNLLSRFTRNEFNLES 79 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLS-VVLVLDL 125 K T+ +E+ T K +W+ G IT+ +LV D+ Sbjct: 80 KSTIGVEFATRSIQVDGKTIKA--QIWDTAGQERYR-----AITSAYYRGAVGALLVYDI 132 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPV 185 +K +E +E L R+ + Sbjct: 133 AKHLT-YENVERWLKELRDHADSNIV---------------------------------- 157 Query: 186 PLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLA 245 +++VG+K D+ R V R A G S I TS+ T + + I Sbjct: 158 -IMLVGNKSDLRH-----LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI 211 Query: 246 FGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGT 286 + K +S D + P+ ++ I P TE Sbjct: 212 YRIVSQKQMS-DRRENDMSPSN--NVVPIHVPPTTENKPKV 249 >gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis] Length = 218 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 79/249 (31%), Gaps = 54/249 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---ERSAHDESPGNNVVDISV 200 Query: 277 PVATEVDIG 285 P T+ G Sbjct: 201 PPTTDSQRG 209 >gi|6679583|ref|NP_033023.1| RAB11B, member RAS oncogene family [Mus musculus] gi|1172815|sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B gi|433064|gb|AAC42093.1| Rab11b gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus] gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus] gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus] gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus] gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus] gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus] gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus] gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus] gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus] gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus] gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus] gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus] Length = 218 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens] Length = 218 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Danio rerio] gi|29294722|gb|AAH48889.1| Zgc:55760 [Danio rerio] Length = 218 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K + +P + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMV---DRPGHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus] Length = 218 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|14249144|ref|NP_116006.1| RAB11B, member RAS oncogene family [Rattus norvegicus] gi|78369332|ref|NP_001030468.1| RAB11A, member RAS oncogene family [Bos taurus] gi|109123235|ref|XP_001093925.1| PREDICTED: RAB11B, member RAS oncogene family [Macaca mulatta] gi|38258938|sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B (GTP-binding protein YPT3) gi|50403673|sp|O35509|RB11B_RAT Ras-related protein Rab-11B gi|108860922|sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus] gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens] gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus] gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct] gi|75773827|gb|AAI05163.1| RAB11A, member RAS oncogene family [Bos taurus] gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis] gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus] Length = 218 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus] Length = 216 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 79/250 (31%), Gaps = 54/250 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K +S D + P+ ++ I Sbjct: 144 EKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHMS-DRRENDMSPSN--NVVPIHV 200 Query: 277 PVATEVDIGT 286 P TE Sbjct: 201 PPTTENKPKV 210 >gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus] Length = 218 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|131849|sp|P22129|RB11B_DISOM Ras-related protein Rab-11B (ORA3) gi|213121|gb|AAA49233.1| GTP-binding protein Length = 218 Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats. Identities = 44/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K IS + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIS---DRSAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos] Length = 216 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 78/246 (31%), Gaps = 54/246 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K +S D + P+ ++ I Sbjct: 144 EKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHV 200 Query: 277 PVATEV 282 P T Sbjct: 201 PPTTGN 206 >gi|94733945|emb|CAK04342.1| novel protein (zgc:55760) [Danio rerio] Length = 205 Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 77/242 (31%), Gaps = 54/242 (22%) Query: 43 FFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGIS 100 +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 2 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQER 59 Query: 101 LSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 IT+ +LV D++K +E +E L R+ + Sbjct: 60 YR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-------- 105 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 +++VG+K D+ R V R A Sbjct: 106 ---------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAEKN 133 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 S I TS+ T + ++ I + K + +P + +++ I P Sbjct: 134 NLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMV---DRPGHDESPGNNVVDISVPPT 190 Query: 280 TE 281 T+ Sbjct: 191 TD 192 >gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens] Length = 218 Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 77/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DCAAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens] Length = 218 Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSDIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|148237448|ref|NP_001087959.1| hypothetical protein LOC494642 [Xenopus laevis] gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis] gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] Length = 218 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRSAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|60302752|ref|NP_001012569.1| RAB11B, member RAS oncogene family [Gallus gallus] gi|126323801|ref|XP_001376337.1| PREDICTED: hypothetical protein [Monodelphis domestica] gi|60098771|emb|CAH65216.1| hypothetical protein [Gallus gallus] Length = 218 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRSAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase Length = 199 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 77/244 (31%), Gaps = 52/244 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 6 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 63 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 + + +LV D++K +E +E L R+ + Sbjct: 64 QERYRRITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 112 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 113 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 138 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 139 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 195 Query: 278 VATE 281 T+ Sbjct: 196 PTTD 199 >gi|4758986|ref|NP_004209.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens] Length = 218 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 77/244 (31%), Gaps = 52/244 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 + + +LV D++K +E +E L R+ + Sbjct: 70 QERYRRITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV------ 118 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V R A Sbjct: 119 -----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAE 144 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 145 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISVP 201 Query: 278 VATE 281 T+ Sbjct: 202 PTTD 205 >gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic construct] gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct] gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct] gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct] gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct] gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct] Length = 217 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 79/250 (31%), Gaps = 54/250 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K +S D + P+ ++ I Sbjct: 144 EKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHV 200 Query: 277 PVATEVDIGT 286 P TE Sbjct: 201 PPTTENKPKV 210 >gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis] Length = 217 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 79/249 (31%), Gaps = 54/249 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K IS + + +++ I Sbjct: 144 EKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIS---DRSGHEESPGNNVVDISL 200 Query: 277 PVATEVDIG 285 P T+ G Sbjct: 201 PPTTDSQRG 209 >gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens] Length = 218 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 42/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I T++ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct] Length = 219 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 77/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DCAAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vinifera] Length = 215 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 77/243 (31%), Gaps = 51/243 (20%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFL-SVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++KP E + L R+ + Sbjct: 71 QERYR-----AITSAYYRGALGALLVYDVTKPTTF-ENVSRWLKELRDHADSNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ R V + + A Sbjct: 120 ------------------------------IMLIGNKTDLKH-----LRAVATEDAQGFA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + K+ I + K++S+D P I G + Sbjct: 145 EKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTLSSDDPAPAGIKEGKTLVVDGSD 204 Query: 277 PVA 279 Sbjct: 205 TNT 207 >gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family [Xenopus laevis] gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis] Length = 218 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 79/245 (32%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ + +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGVVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRSAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|4758984|ref|NP_004654.1| Ras-related protein Rab-11A [Homo sapiens] gi|13592148|ref|NP_112414.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|31980840|ref|NP_059078.2| RAB11a, member RAS oncogene family [Mus musculus] gi|54792725|ref|NP_001003276.1| Ras-related protein Rab-11A [Canis lupus familiaris] gi|72535192|ref|NP_001026958.1| Ras-related protein Rab-11A [Sus scrofa] gi|126722661|ref|NP_001075720.1| tubulovesicle-associated protein [Oryctolagus cuniculus] gi|73999640|ref|XP_855589.1| PREDICTED: rab11 GTP-binding protein [Canis familiaris] gi|114657631|ref|XP_510490.2| PREDICTED: similar to rab11 [Pan troglodytes] gi|126277069|ref|XP_001367185.1| PREDICTED: similar to rab11 [Monodelphis domestica] gi|50402540|sp|P62494|RB11A_RAT Ras-related protein Rab-11A (Rab-11) (24KG) gi|50402541|sp|P62490|RB11A_CANFA Ras-related protein Rab-11A (Rab-11) gi|50402542|sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A (Rab-11) (YL8) gi|50402543|sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A (Rab-11) gi|50402544|sp|P62493|RB11A_RABIT Ras-related protein Rab-11A (Rab-11) gi|75056558|sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A gi|75070685|sp|Q5R9M7|RB11A_PONPY Ras-related protein Rab-11A gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens] gi|917|emb|CAA39799.1| rab11 [Canis familiaris] gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens] gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein gi|310067|gb|AAA31491.1| tubulovesicle-associated protein gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens] gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens] gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus] gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus] gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens] gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens] gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens] gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens] gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens] gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo pygmaeus] gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct] gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct] gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa] gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus] gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus] gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus] gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus] gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct] gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct] gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus] gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|1089909|prf||2018147A GTP-binding protein rab11 Length = 216 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 79/250 (31%), Gaps = 54/250 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K +S D + P+ ++ I Sbjct: 144 EKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHV 200 Query: 277 PVATEVDIGT 286 P TE Sbjct: 201 PPTTENKPKV 210 >gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] Length = 218 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---ERSAHGESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|84000297|ref|NP_001033251.1| hypothetical protein LOC534708 [Bos taurus] gi|116255983|sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A gi|83405346|gb|AAI11144.1| Similar to RAB11a, member RAS oncogene family [Bos taurus] Length = 216 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 47/250 (18%), Positives = 79/250 (31%), Gaps = 54/250 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K +S D + P+ ++ I Sbjct: 144 EKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHV 200 Query: 277 PVATEVDIGT 286 P TE Sbjct: 201 PPTTENKPKV 210 >gi|57524801|ref|NP_001005827.1| Ras-related protein Rab-11A [Gallus gallus] gi|82233797|sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A gi|53133464|emb|CAG32061.1| hypothetical protein [Gallus gallus] Length = 216 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 47/246 (19%), Positives = 79/246 (32%), Gaps = 54/246 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K +S D + P+ ++ I Sbjct: 144 EKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHV 200 Query: 277 PVATEV 282 P TE Sbjct: 201 PPTTEN 206 >gi|50540176|ref|NP_001002555.1| hypothetical protein LOC436828 [Danio rerio] gi|125808482|ref|XP_001330902.1| PREDICTED: hypothetical protein [Danio rerio] gi|125808488|ref|XP_001336227.1| PREDICTED: hypothetical protein [Danio rerio] gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio] Length = 218 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---ERSAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|154343515|ref|XP_001567703.1| dynein light intermediate chain, putative [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065035|emb|CAM43147.1| dynein light intermediate chain, putative [Leishmania braziliensis] Length = 428 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 95/375 (25%), Positives = 169/375 (45%), Gaps = 42/375 (11%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 ++ D D+ +R + E + + +G+ GKTT+L R Sbjct: 64 QIVIDPTKDLWQNI--TRNVKDAAVEQT--------EINLVVVGAPGSGKTTLLHRIYTS 113 Query: 63 DETA---------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADN 113 +++ K T AL+Y+F RR+ +AH WE+ G+ S L+ + +T +N Sbjct: 114 FQSSASGSCSKRVKATTALDYSFARRS--ERNVAPVAHFWEIAQGMQFSQLLDVVVTPEN 171 Query: 114 VSFLSVVLVLDLSKPN--ALWETMESLLGSARNQVEKVCAALQKTGESRSGK--QRVPRV 169 V + +V+D S+ WE + +V + ++ G + K R + Sbjct: 172 VHAIVAAVVVDASEEGLPVAWEAATYWMRRIDQRVSDISQRMKAKGSTTPEKLLTRAQKA 231 Query: 170 LHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSK 229 + ++PD + + VP ++V +K D F+ D ++ K++C+++R+LAH YGA ++FTS + Sbjct: 232 VGLEHPDLKRMRLSGVPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQ 290 Query: 230 SETTMSKSRSFINQLAFGTER-PKSISTD-PSKPLAIPAGSDSLSQIGPPVATE---VDI 284 + R+ +N F PK + TD + + A DS IG P + Sbjct: 291 ESV---RWRALMNFTLFQAPFDPKHLQTDPERGAVLLTADRDSFLDIGDPNMSRLGGGGS 347 Query: 285 GTLHAKNPFDLWKKVFEKVFPHESTRE-RKELKDP-------VKDPQFSEPLIDSIRAQK 336 D WK F+ FP + E K + DP + F EP+ID++R QK Sbjct: 348 SASTGDAELDRWKVPFDDAFPPKKLNEEDKVMDDPFIRRLYDTSEGGFGEPMIDTLRKQK 407 Query: 337 DQELDQYKREQAKSW 351 D+EL+QY++ + + Sbjct: 408 DEELEQYRKNSSNAA 422 >gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521] gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521] Length = 213 Score = 208 bits (531), Expect = 3e-52, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 84/261 (32%), Gaps = 56/261 (21%) Query: 31 EEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKD 88 ++++ V +G GK+ +L RF + + +K T+ +E+ + T K Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKA 61 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G IT+ +LV D++K + L R+ + Sbjct: 62 --QIWDTAGQERYR-----AITSAYYRGAVGALLVYDIAKHPTYVN-VSRWLKELRDHAD 113 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 +++VG+K D+ R V Sbjct: 114 SNIV-----------------------------------IMLVGNKSDLRH-----LRAV 133 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + + A S I TS+ + + ++ I + K++ + + P+G Sbjct: 134 PTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDD--VIKPSG 191 Query: 268 SDSLSQIGPPVATEVDIGTLH 288 ++ I + + T Sbjct: 192 GET---ITVQPSADDGGQTKK 209 >gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 446 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 97/321 (30%), Gaps = 73/321 (22%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + P + Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDR-DVIR------DFQEYVEPGEDFPASPQ---------- 132 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISP 182 + N + ++ + L Sbjct: 133 ----RRNT------------------------------ASQEDKDDSVVLPLGADTLTHN 158 Query: 183 FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSK 236 +P+L+V +K D D+ E I +R YGA+LI+TS K + Sbjct: 159 LGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDL 218 Query: 237 SRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DL 295 +I Q +G + IPAG D+ +IG + TL A++ F D+ Sbjct: 219 VYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIG---ILHENFQTLKAEDNFEDI 275 Query: 296 WKKVFEKVFPHESTRERKELK 316 K + F HE ++ + Sbjct: 276 ITKPPVRKFVHEKEIMAEDDQ 296 >gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980] gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980] Length = 213 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 75/253 (29%), Gaps = 55/253 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 10 FKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA--QIWDTAG 67 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+SK +E + L R+ + Sbjct: 68 QERYR-----AITSAYYRGAVGALLVYDISKHQT-YENVTRWLKELRDHADSNIV----- 116 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 117 ------------------------------IMLVGNKSDLRH-----LRAVPTEEAKQFA 141 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ + + + I + K++ S I +G+ I Sbjct: 142 SENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGDSAQATIGSGT----NITL 197 Query: 277 PVATEVDIGTLHA 289 + Sbjct: 198 TPPPSDEAAKGGG 210 >gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis] gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis] Length = 216 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 75/241 (31%), Gaps = 51/241 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ R+ + A +W+ G Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFA--TRSINVDGKMIKAQIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E +E L R+ E Sbjct: 71 QERYR-----AITSAYYRGAVGALLVYDITRHVTF-ENVERWLKELRDHTEHNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 120 ------------------------------VMLVGNKSDLRH-----LRAVSTEDAQTFA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G I TS+ T + + + + K++ A P G + Sbjct: 145 EREGLYFIETSALESTNVENAFKQVLTQIYRIVSKKALDVSEDNAAAPPQGQTINVKDDV 204 Query: 277 P 277 Sbjct: 205 T 205 >gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var. neoformans B-3501A] Length = 213 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 81/260 (31%), Gaps = 56/260 (21%) Query: 31 EEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKD 88 + +++ V +G GK+ +L RF + +K T+ +E+ T K Sbjct: 2 TDGSNYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKA 61 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G IT+ +LV D++K +E + L R+ + Sbjct: 62 --QIWDTAGQERYR-----AITSAYYRGAVGALLVYDIAKHQT-YENVTRWLKELRDHAD 113 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 +++VG+K D+ R V Sbjct: 114 ANIV-----------------------------------IMLVGNKSDLKH-----LRAV 133 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + A G S I TS+ + + + I + KS+ + + P+G Sbjct: 134 STDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD--VIKPSG 191 Query: 268 SDSLSQIGPPVATEVDIGTL 287 ++ I + Sbjct: 192 GET---ILVAPTADDGGAKS 208 >gi|3024500|sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus] Length = 226 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 81/246 (32%), Gaps = 52/246 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ IL RF + +K T+ +E+ H T K +W+ G Sbjct: 18 FKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKA--QIWDTAG 75 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + L RN +K Sbjct: 76 QERYR-----AVTSAYYRGAVGAMLVYDITKRQTFDH-IPRWLEELRNHADKNIV----- 124 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ +R V + + A Sbjct: 125 ------------------------------IILIGNKCDLVN-----QRDVPTEDAKEFA 149 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G + TS+ T + + + + + KS++ D S+ A S +I Sbjct: 150 EKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQGNGNSASL-SGQKIII 208 Query: 277 PVATEV 282 P + Sbjct: 209 PGPAQE 214 >gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis] gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis] Length = 218 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 79/251 (31%), Gaps = 55/251 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEAKAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA-GSDSLSQIG 275 G S I TS+ T + + I + K I P + + S+++ I Sbjct: 144 EKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQI---HDSPSSDGSHPSNNVQTIH 200 Query: 276 PPVATEVDIGT 286 T+ D Sbjct: 201 VAPTTDDDRKK 211 >gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10] gi|150854657|gb|EDN29849.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10] Length = 213 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 75/253 (29%), Gaps = 55/253 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 10 FKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA--QIWDTAG 67 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+SK +E + L R+ + Sbjct: 68 QERYR-----AITSAYYRGAVGALLVYDISKHQT-YENVTRWLKELRDHADSNIV----- 116 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 117 ------------------------------IMLVGNKSDLRH-----LRAVPTEEAKQFA 141 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ + + + I + K++ S I +G+ I Sbjct: 142 SENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGDSAQATIASGT----NITL 197 Query: 277 PVATEVDIGTLHA 289 + Sbjct: 198 TPPPSDEAAKGGG 210 >gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries] Length = 208 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 76/250 (30%), Gaps = 54/250 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 4 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 61 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 62 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 110 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 111 ------------------------------IMLVGNKSDLRH-----FRAVPTDEARAFA 135 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I T + T + + I + K +S S+++ I Sbjct: 136 EKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQMSDRREN---DMFPSNNVVPIHV 192 Query: 277 PVATEVDIGT 286 P TE Sbjct: 193 PPTTENKPKV 202 >gi|148236881|ref|NP_001088852.1| hypothetical protein LOC496163 [Xenopus laevis] gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis] Length = 218 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 76/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + +S I + K ++ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMA---DRAAHEDSPGNNVVDISV 200 Query: 277 PVATE 281 + Sbjct: 201 TPTMD 205 >gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis] Length = 216 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 78/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARVFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 EKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRSAHDESPGNNVVDISV 200 Query: 277 PVATE 281 P T+ Sbjct: 201 PPTTD 205 >gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii] gi|3025293|sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 gi|806728|gb|AAA82729.1| YptC6 gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii] Length = 216 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 45/253 (17%), Positives = 80/253 (31%), Gaps = 56/253 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ T K +W+ G Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K E +E L R+ + Sbjct: 71 QERYR-----AITSAYYRGAVGALLVYDITKSVTF-ENVERWLKELRDHADSNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + Sbjct: 120 ------------------------------IMLVGNKSDLKH-----LRDVQTEVAQAFC 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + K+ I + K + ++ ++P I G D + Sbjct: 145 EREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRP-KIGEGRDVI----V 199 Query: 277 PVATEVDIGTLHA 289 D G Sbjct: 200 IDNAHDDGGKKKG 212 >gi|52345666|ref|NP_001004880.1| MGC88884 protein [Xenopus tropicalis] gi|49671143|gb|AAH75268.1| MGC88884 protein [Xenopus tropicalis] Length = 218 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 76/245 (31%), Gaps = 54/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + +S I + K ++ + + +++ I Sbjct: 144 EKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMA---DRAAHEDSPGNNVVDISV 200 Query: 277 PVATE 281 + Sbjct: 201 TPTMD 205 >gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] gi|148234494|ref|NP_001087765.1| MGC84419 protein [Xenopus laevis] gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis] gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] Length = 216 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 45/246 (18%), Positives = 79/246 (32%), Gaps = 54/246 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNKIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + ++ +D + P+ ++ I Sbjct: 144 EKNGLSFIETSALDSTNVEAAFQTILTEIYRIVS-QTQMSDRRENDMSPSN--NVVPIHV 200 Query: 277 PVATEV 282 P TE Sbjct: 201 PPTTEN 206 >gi|55925277|ref|NP_001007360.1| RAB11a, member RAS oncogene family [Danio rerio] gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio] gi|94733840|emb|CAK10790.1| novel protein (zgc:103679) [Danio rerio] gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio] Length = 215 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 75/243 (30%), Gaps = 54/243 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S + TS+ T + + I + K +S D P+ ++ I Sbjct: 144 EKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMS-DRRDNDMSPSN--NVVSIQV 200 Query: 277 PVA 279 Sbjct: 201 QPT 203 >gi|1381676|gb|AAB97114.1| small GTP-binding protein [Glycine max] Length = 222 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 79/246 (32%), Gaps = 52/246 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ IL RF + +K T+ +E+ H T K +W+ G Sbjct: 14 FKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKA--QIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + L RN +K Sbjct: 72 QERYR-----AVTSAYYRGAVGAMLVYDITKRQTFDH-IPRWLEELRNHADKNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++ G+K D+ +R V + + A Sbjct: 121 ------------------------------IILTGNKCDL-----ENQRDVPTEDAKEFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G + TS+ T + + + + K+++ D ++ A S +I Sbjct: 146 EKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADENQGNGNSASL-SGQKIIV 204 Query: 277 PVATEV 282 P + Sbjct: 205 PGPAQE 210 >gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella] Length = 218 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 78/248 (31%), Gaps = 55/248 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + +Q Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIVIMQ-- 121 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 VG+K D+ R V + A Sbjct: 122 ---------------------------------VGNKSDLRH-----LRAVPTDEAKAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA-GSDSLSQIG 275 G S I TS+ T + + I + K I P + + S+++ I Sbjct: 144 EKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQI---HDSPTSDGSHPSNNVQTIH 200 Query: 276 PPVATEVD 283 T+ D Sbjct: 201 VAPTTDED 208 >gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa] Length = 223 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 80/252 (31%), Gaps = 52/252 (20%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ IL RF + +K T+ +E+ H + K +W+ G Sbjct: 18 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKA--QIWDTAG 75 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + L R+ +K Sbjct: 76 QERYR-----AVTSAYYRGAVGAMLVYDITKRQTFDH-IPRWLEELRSHADKNIV----- 124 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ ++R V + + A Sbjct: 125 ------------------------------IILIGNKSDL-----EDQRAVPTEDVNEFA 149 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G + TS+ T + + + F K++ ++ PA S +I Sbjct: 150 QKEGLFFLETSALQATNVESAFMTLLTEIFNIVNKKNLIAGENQSNGNPASL-SGKKIII 208 Query: 277 PVATEVDIGTLH 288 P + Sbjct: 209 PGPAQEIPSKSK 220 >gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] gi|31376209|gb|AAO12154.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|33334344|gb|AAQ12259.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|47680185|gb|AAT37069.1| dynein 1b light intermediate chain [Chlamydomonas reinhardtii] gi|158276532|gb|EDP02304.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] Length = 427 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 97/371 (26%), Positives = 173/371 (46%), Gaps = 36/371 (9%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 +P + T I A + EE ++ A +F+GS+A GK+T+L RFL Sbjct: 7 LPGQAVKTPGSIWA-----KAIEHANEERKKPGADGRGDAFCYFVGSRAAGKSTLLNRFL 61 Query: 61 --ERDETAKPTLALEYTFGRR-ARGHNTPKDIAHLWELGGGISLSDLV----QIPITADN 113 R E KP+ +EYT+ R+ A + KD+AH+WE+GG ++ + Q+ +TA Sbjct: 62 YPTRAEVPKPSEGIEYTYARKPAAFDHEKKDLAHIWEVGGSQEFAEEIVNSDQLFLTAKQ 121 Query: 114 VSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE--SRSGKQRVPRVLH 171 V+ VV+V+DLS P + T+ + + ++ +K G +QR L+ Sbjct: 122 VTTAVVVIVVDLSDPAGVLPTLLYWVEQVKKKLGSTYEKFEKKGLQLPEQLRQRAKSKLY 181 Query: 172 KDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTS---- 227 D++ + + L+I +K+D F++ D E +KV+ + LR++AH +GA L + S Sbjct: 182 SANEDKDTVYHSGISLVIAATKYDAFKNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLHG 241 Query: 228 ------SKSETTMSKSRSFINQLAFGTERPKSI-----STDPSKPLAIPAGSDSLSQIGP 276 ++ + +N L F K + D + P+ +PAG D+ +G Sbjct: 242 ASEGSGAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSVGR 301 Query: 277 PVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVK---DPQFSEPLIDSIR 333 P + W+++FEK+FP +E K K Q+ E +D++R Sbjct: 302 PRSQGEG----TVAGGLAEWRELFEKMFPGVREKEAKMSAKGAKFVIPEQYKEEEVDAVR 357 Query: 334 AQKDQELDQYK 344 +K +L+ ++ Sbjct: 358 QRKVTDLENFR 368 >gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus] Length = 217 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 74/247 (29%), Gaps = 53/247 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + + I + K I D D++ I Sbjct: 144 EKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIRNDTDN--DPSPSGDNVKPISI 201 Query: 277 PVATEVD 283 D Sbjct: 202 APTDSSD 208 >gi|116498990|gb|EAU81885.1| hypothetical protein CC1G_06096 [Coprinopsis cinerea okayama7#130] Length = 209 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 74/261 (28%), Gaps = 58/261 (22%) Query: 31 EEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKD 88 E +++ V +G GK+ +L RF + +K T+ +E+ T K Sbjct: 2 AEGSNYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKA 61 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G IT+ +LV D++K + L R+ + Sbjct: 62 --QIWDTAGQERYR-----AITSAYYRGAVGALLVYDIAKHATYVN-VTRWLKELRDHAD 113 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + +VG+K D+ R V Sbjct: 114 SNIVIM-----------------------------------LVGNKSDLKH-----LRAV 133 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + A G S I TS+ + + + I + KS+ + + G Sbjct: 134 PTDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLESSSTNIEPPTQG 193 Query: 268 SDSLSQIGPP-VATEVDIGTL 287 I G Sbjct: 194 ------ISVTAPEPADKGGKC 208 >gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150 [Aspergillus niger] gi|134076075|emb|CAK39434.1| unnamed protein product [Aspergillus niger] Length = 523 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 56/377 (14%), Positives = 108/377 (28%), Gaps = 58/377 (15%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK----------- 67 + + ++ P ++ + +G + L Sbjct: 27 KKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFLDTLAADSSDPSLSNDKRKGRVP 85 Query: 68 ---PTLALEYTFGRRARGHNTPK-DIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVLV 122 AL YT+ + + L S + L++ +T ++ VV++ Sbjct: 86 PVANQFALGYTYQDVLDADHEDTLARVSAYLLSEPSLSFAPLLKPLLTPQSIPETLVVIL 145 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------- 175 LD S P + + R V K + + R D Sbjct: 146 LDWSDPWTWIRRLREWVRLLR-HVLISLDDETKIVMEENLTEWRDRKRGMDSSSGGAQGF 204 Query: 176 ------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 E +P+ +V D + E+ I + +R L Sbjct: 205 TSSAGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEQFDFILQFMRTLLL 264 Query: 218 FYGASLIFTSSKSETTMSKSR--SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 +GASLI+T+ ++ S + K D K + +P+ DS +I Sbjct: 265 KHGASLIYTTPFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPSNWDSWGKIR 323 Query: 276 PPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLID--SIR 333 G A + + E + + D D Q + + D S Sbjct: 324 IIREGFDMEGISTAWSI--EIQDPPEPLT--------NGVDDRSSDEQTANAVDDGTSAV 373 Query: 334 AQKDQELDQYKREQAKS 350 A +Q + KR+ + + Sbjct: 374 AIFEQTIQDPKRDTSMA 390 >gi|15233873|ref|NP_193578.1| AtRABA1e (Arabidopsis Rab GTPase homolog A1e); GTP binding [Arabidopsis thaliana] gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis thaliana] gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis thaliana] gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana] gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana] Length = 217 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 78/249 (31%), Gaps = 54/249 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +L RF + + +K T+ +E+ A LW+ G Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVD--EKIIKAQLWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E +E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDITRHITF-ENVERWLKELRDHTDANVV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + R + Sbjct: 121 ------------------------------IMLVGNKADLRH-----LRAVPTEEARSFS 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS--DSLSQI 274 + TS+ T + ++ + + + K++ P+++P G D ++ Sbjct: 146 ERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALD-GTGDPMSLPKGQTIDIGNKD 204 Query: 275 GPPVATEVD 283 Sbjct: 205 DVTAVKSSG 213 >gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis] Length = 203 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 79/247 (31%), Gaps = 54/247 (21%) Query: 42 VFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQE 58 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 IT+ +LV D++K +E +E L R+ + Sbjct: 59 RYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV------- 105 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ R V R A Sbjct: 106 ----------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAEK 132 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPV 278 S I TS+ T + ++ I + K I+ + + +++ I P Sbjct: 133 NTLSFIETSALDSTKVEEAFKNILTEIYRIVSQKQIA---DRSAHDESPGNNVVDISLPP 189 Query: 279 ATEVDIG 285 T+ G Sbjct: 190 TTDSQRG 196 >gi|147811153|emb|CAN70163.1| hypothetical protein [Vitis vinifera] gi|157330348|emb|CAO45515.1| unnamed protein product [Vitis vinifera] Length = 226 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 79/259 (30%), Gaps = 52/259 (20%) Query: 32 EDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDI 89 V +G A GK+ IL RF + +K T+ +E+ H + K Sbjct: 10 SSQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA- 68 Query: 90 AHLWELGGGISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEK 148 +W+ G +T+ +LV D++K + + L R +K Sbjct: 69 -QIWDTAGQERYR-----AVTSAYYRGAVGAMLVYDITKRQSFDH-IPRWLEELRGHADK 121 Query: 149 VCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVI 208 ++++G+K D+ E+R V Sbjct: 122 NIV-----------------------------------IILIGNKTDL-----EEQRAVP 141 Query: 209 CKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 + + A G + TS+ T + + + F K++ + PA Sbjct: 142 TEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNLVAGEDQANGNPASL 201 Query: 269 DSLSQIGPPVATEVDIGTL 287 + +I P + Sbjct: 202 -TGKRITIPGPAQEIPAKS 219 >gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis] Length = 223 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 75/244 (30%), Gaps = 54/244 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ IL R+ + +K T+ +E+ H + K +W+ G Sbjct: 17 FKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSVKA--QIWDTAG 74 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D+++ + L R +K Sbjct: 75 QERYR-----AVTSAYYRGAVGAMLVYDVTRRQTFDH-IPRWLEELRGHADKNIV----- 123 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ ++R + + + A Sbjct: 124 ------------------------------IILVGNKSDL-----EDQRAISTEDAKEFA 148 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G + TS+ + + + S + F K++ GS + +I Sbjct: 149 ETEGLFFLETSALNAVNVETAFSTVLTEIFNIVNKKNLVAGEGN---GDPGSLAGKKIDI 205 Query: 277 PVAT 280 Sbjct: 206 VPGP 209 >gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana] Length = 204 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 76/243 (31%), Gaps = 54/243 (22%) Query: 44 FMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISL 101 +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQERY 61 Query: 102 SDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR 160 IT+ +LV D++K +E +E L R+ ++ Sbjct: 62 R-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLRELRDHADQNIV--------- 106 Query: 161 SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYG 220 +++VG+K D+ R V + A G Sbjct: 107 --------------------------IMLVGNKSDLRH-----LRAVPTDEAKAFAERNG 135 Query: 221 ASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVAT 280 S I TS+ T + + I + K I + L P ++ QI Sbjct: 136 LSFIETSALDSTNVETAFQNILTEIYRIVSQKQIVILQKEILIRP---HNVEQIDVKPTG 192 Query: 281 EVD 283 E Sbjct: 193 ERG 195 >gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HOMOLOG A2A); GTP binding [Arabidopsis thaliana] gi|3024516|sp|O04486|RB11C_ARATH Ras-related protein Rab11C gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene. [Arabidopsis thaliana] gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana] gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana] gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana] gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana] Length = 217 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 79/250 (31%), Gaps = 54/250 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFL-SVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++KP E + L R+ + Sbjct: 71 QERYR-----AITSAYYRGALGALLVYDVTKPTTF-ENVSRWLKELRDHADSNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ R V + + A Sbjct: 120 ------------------------------IMLIGNKTDLKH-----LRAVATEDAQSYA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ + K+ I + KSIS+D + A + I Sbjct: 145 EKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANANIKEGQT---IDV 201 Query: 277 PVATEVDIGT 286 +E + Sbjct: 202 AATSESNAKK 211 >gi|157344192|emb|CAO69125.1| unnamed protein product [Vitis vinifera] Length = 215 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 75/232 (32%), Gaps = 51/232 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ IL RF + +K T+ +E+ T K +W+ G Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K E ++ L R+ + Sbjct: 71 QERYR-----AITSAYYRGAVGALLVYDITKRQTF-ENVQRWLRELRDHADSNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++ G+K D+ R V + LA Sbjct: 120 ------------------------------IMMAGNKSDLNH-----LRAVSGDDAQILA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 G S + TS+ + K+ I + K+++ + + +P G+ Sbjct: 145 EKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASINLPHGT 196 >gi|91076508|ref|XP_973251.1| PREDICTED: similar to CG5771-PB, isoform B [Tribolium castaneum] Length = 215 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 78/252 (30%), Gaps = 54/252 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 ITA +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITAAYYRGAVGALLVYDIAKHLT-YENVERWLRELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V+ + + A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVLTEEAKAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K I P + P ++ I Sbjct: 144 ERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIRDPPEGDVIRP---HNVEPIDV 200 Query: 277 PVATEVDIGTLH 288 D Sbjct: 201 KPTMNTDGVRKQ 212 >gi|3024501|sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus] Length = 216 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 75/246 (30%), Gaps = 53/246 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ IL RF + +K T+ +E+ T K +W+ G Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K + ++ L R+ + Sbjct: 71 QERYR-----AITSAYYRGAVGALLVYDITKRQTF-DNVQRWLRELRDHADSNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++ G+K D+ R V L+ Sbjct: 120 ------------------------------IMMAGNKSDLNH-----LRAVSEDDGGALS 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S + TS+ T + K+ I + K+++ + A G + I Sbjct: 145 EKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGT--TINV 202 Query: 277 PVATEV 282 + Sbjct: 203 ADTSGN 208 >gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis] Length = 217 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 75/235 (31%), Gaps = 52/235 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDD--KVIKAQIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E +E L R+ + Sbjct: 71 QERYR-----AITSAYYRGAVGALLVYDVTRHVTF-ENVERWLKELRDHTDANIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 120 ------------------------------IMLVGNKADLRH-----LRAVSIEDGKAFA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + TS+ T + + + + + K++ P A+P+ ++ Sbjct: 145 ERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKALDVGE-DPAAVPSKGQTI 198 >gi|109940137|sp|P25766|RGP1_ORYSJ Ras-related protein RGP1 (GTP-binding regulatory protein RGP1) gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa (japonica cultivar-group)] Length = 226 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 51/242 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 19 FKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKA--QIWDTAG 76 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + + L R +K Sbjct: 77 QERYR-----AVTSAYYRGAVGAMLVYDITKRQSFDH-VARWLEELRGHADKNIV----- 125 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ R V + + A Sbjct: 126 ------------------------------IMLIGNKSDLGT-----LRVVPTEDAKEFA 150 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + + + + K++ + + + ++I Sbjct: 151 ERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSLLKGTKIVV 210 Query: 277 PV 278 P Sbjct: 211 PG 212 >gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa (japonica cultivar-group)] gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa (japonica cultivar-group)] gi|125595229|gb|EAZ35288.1| hypothetical protein OsJ_018771 [Oryza sativa (japonica cultivar-group)] Length = 217 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 52/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD--KVVKAQIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ ++V D+++ E +E + ++ + Sbjct: 71 QERYR-----AITSAYYRGAVGALVVYDVTRHVTF-ENVERWMRELKDHTDANIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 120 ------------------------------IMLVGNKADLRH-----LRAVSTEDAKAFA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A P G Sbjct: 145 EKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIG-DDPAAPPKG 194 >gi|3024528|sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris] Length = 214 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 73/232 (31%), Gaps = 51/232 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ IL RF + +K T+ +E+ T K +W+ G Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K + ++ L R+ + Sbjct: 71 QERYR-----AITSAYYRGAVGALLVYDITKRQTF-DNVQRWLRELRDHADSNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++ G+K D+ R V + + LA Sbjct: 120 ------------------------------IMMAGNKSDLKH-----LRAVSEEDGQALA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 G S + TS+ + K+ I + K+++ + G+ Sbjct: 145 EKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQGT 196 >gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae] Length = 221 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 74/245 (30%), Gaps = 60/245 (24%) Query: 43 FFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGIS 100 +G GK+ +L RF + K T+ +E+ + A +W+ G Sbjct: 23 VLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVD--SKTIKAQIWDTAGQER 80 Query: 101 LSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 IT+ +LV D+SK ++ + L R+ + Sbjct: 81 YR-----AITSAYYRGAVGALLVYDISKHQT-YDNVNRWLKELRDHADSNIV-------- 126 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 +++VG+K D+ R V + + A Sbjct: 127 ---------------------------IMLVGNKSDLRH-----LRAVPTEEAKQFASEN 154 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIST---------DPSKPLAIPAGSDS 270 S I TS+ + + + I + K++ + D + I D Sbjct: 155 NLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQAGLGDRRPVVDINPSQDP 214 Query: 271 LSQIG 275 ++ G Sbjct: 215 ETKQG 219 >gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus] Length = 217 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 74/247 (29%), Gaps = 53/247 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + + I + K I D D++ I Sbjct: 144 EKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQKQIRNDADN--DPSPSGDNVKAISI 201 Query: 277 PVATEVD 283 D Sbjct: 202 APTDSSD 208 >gi|125951003|ref|XP_001345672.1| PREDICTED: hypothetical protein [Danio rerio] Length = 217 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 77/240 (32%), Gaps = 54/240 (22%) Query: 45 MGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLS 102 +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 16 IGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAGQERYR 73 Query: 103 DLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRS 161 IT+ +LV D++K +E +E L R+ + Sbjct: 74 -----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADNNIV---------- 117 Query: 162 GKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGA 221 +++VG+K D+ R V R A Sbjct: 118 -------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAEKNNL 147 Query: 222 SLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATE 281 S I TS+ T + ++ I + K I+ + + +++ I P T+ Sbjct: 148 SFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---ERSAHDESPGNNVVDISVPPTTD 204 >gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi] Length = 215 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 80/245 (32%), Gaps = 53/245 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHVT-YENVERWLKELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEAKAYA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + + + I + + K + D ++ GS+ + I P Sbjct: 144 EKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHVGGD-NRAAISTPGSNGIV-ISP 201 Query: 277 PVATE 281 + Sbjct: 202 TAEPQ 206 >gi|41056251|ref|NP_956417.1| hypothetical protein LOC386994 [Danio rerio] gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio] Length = 216 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 73/249 (29%), Gaps = 54/249 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E E L ++ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENAERWLKELQDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPMDEAKAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 +G S + TS+ + + + I + + +S P+ + I Sbjct: 144 EKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQMS-GRGDDSFSPSSK--VVPITV 200 Query: 277 PVATEVDIG 285 Sbjct: 201 QPTQNSGKQ 209 >gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus] gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus] Length = 217 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 74/247 (29%), Gaps = 53/247 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + + I + K I D D++ I Sbjct: 144 EKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQKQIRNDADN--DPSPSGDNVKAISI 201 Query: 277 PVATEVD 283 D Sbjct: 202 APTDSSD 208 >gi|15238392|ref|NP_201330.1| AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding [Arabidopsis thaliana] gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana] gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana] gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana] gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana] Length = 226 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 78/246 (31%), Gaps = 52/246 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ IL R+ + +K T+ +E+ H + K +W+ G Sbjct: 18 FKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKA--QIWDTAG 75 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D+++ + L R +K Sbjct: 76 QERYR-----AVTSAYYRGAVGAMLVYDITRRQTFDH-IPRWLEELRAHADKNIV----- 124 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ ++R + + + A Sbjct: 125 ------------------------------IILIGNKSDLV-----DQRAIPTEDAKEFA 149 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G + TS+ + T + + S + F KS++ GS + +I Sbjct: 150 EKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASE-DQENGNPGSLAGKKIDI 208 Query: 277 PVATEV 282 Sbjct: 209 VPGPGQ 214 >gi|15230422|ref|NP_187823.1| AtRABA4d (Arabidopsis Rab GTPase homolog A4d); GTP binding [Arabidopsis thaliana] gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana] gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana] gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana] Length = 222 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 75/253 (29%), Gaps = 55/253 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GKT +L RF + +K T+ +E+ + T K +W+ G Sbjct: 16 FKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKA--QIWDTAG 73 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + M L R +K + Sbjct: 74 QERYR-----AVTSAYYRGAVGAMLVYDMTKRQSFDH-MAKWLEELRGHADKNIVIM--- 124 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++G+K D+ R V + + A Sbjct: 125 --------------------------------LIGNKCDLG-----SLRAVPTEDAQEFA 147 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + + I + KS++ D G+ SL + Sbjct: 148 QRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDDA----DGNSSLLKGTR 203 Query: 277 PVATEVDIGTLHA 289 + Sbjct: 204 IIIPSEQESGKRG 216 >gi|3024504|sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B gi|623578|gb|AAA74113.1| putative Length = 217 Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 72/231 (31%), Gaps = 52/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +L RF + +K T+ +E+ K +W+ G Sbjct: 15 FKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKA--QIWDTAG 72 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ ++V D+++ E +E L R+ ++ Sbjct: 73 QERYR-----AITSAYYRGAVGALVVYDITRHVTF-ENVERWLKELRDHTDQNIV----- 121 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 122 ------------------------------IMLVGNKADLRH-----LRAVSTEDAKAFA 146 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A+P G Sbjct: 147 ERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVG-DDPAALPKG 196 >gi|66513627|ref|XP_623997.1| PREDICTED: similar to Rab-protein 11 CG5771-PB, isoform B [Apis mellifera] Length = 215 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 73/243 (30%), Gaps = 59/243 (24%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLRELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEAKAFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K + P D++ Sbjct: 144 EKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK--------QIRDPPEGDTIRPQNV 195 Query: 277 PVA 279 Sbjct: 196 EPI 198 >gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti] gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti] gi|108874607|gb|EAT38832.1| rab11 [Aedes aegypti] Length = 215 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 75/244 (30%), Gaps = 55/244 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ R+ + A +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFA--TRSIEVDGKTIKAQIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLRELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEAKGFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K I P +L I Sbjct: 144 ERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI----RDPPEGSVIRPNLENIDV 199 Query: 277 PVAT 280 Sbjct: 200 KPTN 203 >gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago truncatula] Length = 220 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 71/220 (32%), Gaps = 51/220 (23%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 16 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA--QIWDTAG 73 Query: 98 GISLSDLVQIPITADNVSFL-SVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++KP + + L R+ + Sbjct: 74 QERYR-----AITSAYYRGALGALLVYDVTKPTTF-DNVTRWLKELRDHADANIV----- 122 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ R V + + A Sbjct: 123 ------------------------------IMLIGNKTDLKH-----LRAVATEDAQSYA 147 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIST 256 G S I TS+ T + K+ + KS+ST Sbjct: 148 EKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLST 187 >gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15] Length = 215 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 70/222 (31%), Gaps = 51/222 (22%) Query: 37 PSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWE 94 P+ T +G GK+ +L RF + +K T+ +E+ T K +W+ Sbjct: 10 PACHTFVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKA--QIWD 67 Query: 95 LGGGISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 G IT+ +LV D+SK +E + L R+ + Sbjct: 68 TAGQERYR-----AITSAYYRGAVGALLVYDISKHQT-YENVTRWLKELRDHADSNIV-- 119 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + + Sbjct: 120 ---------------------------------IMLVGNKSDLRH-----LRAVPTEEAK 141 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 A S I TS+ + + + I + K++ Sbjct: 142 QFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 183 >gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus] Length = 218 Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 44/246 (17%), Positives = 79/246 (32%), Gaps = 56/246 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV-ICKTLRFL 215 +L+VG+K D+ R V R Sbjct: 119 ------------------------------ILLVGNKSDLRH-----LRAVCPLTEARAF 143 Query: 216 AHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 A + S I TS+ T + ++ I + K I+ + + +++ I Sbjct: 144 AERH-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVDIS 199 Query: 276 PPVATE 281 P T+ Sbjct: 200 VPPTTD 205 >gi|147834751|emb|CAN75016.1| hypothetical protein [Vitis vinifera] gi|157338370|emb|CAO39414.1| unnamed protein product [Vitis vinifera] Length = 218 Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 75/237 (31%), Gaps = 52/237 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD--GKVIKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E ++ L RN + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHATF-ENVDRWLKELRNHTDPNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ V + + A Sbjct: 121 ------------------------------VMLVGNKSDLRHLV-----AVSTEDGKTYA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS-TDPSKPLAIPAGSDSLS 272 + TS+ T + + + + + KS+ D ++PA + ++ Sbjct: 146 ERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGDEGAASSVPAKGERIN 202 >gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase Length = 184 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 66/212 (31%), Gaps = 51/212 (24%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 21 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 78 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 79 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 127 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 128 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 152 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 G S I TS+ T + + I + Sbjct: 153 EKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184 >gi|156551916|ref|XP_001607057.1| PREDICTED: similar to putative rab11 [Nasonia vitripennis] Length = 215 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 73/243 (30%), Gaps = 59/243 (24%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLRELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEAKTFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K + P D++ Sbjct: 144 EKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK--------QIRDPPEGDTIRPQNV 195 Query: 277 PVA 279 Sbjct: 196 EPI 198 >gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] Length = 215 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 78/232 (33%), Gaps = 51/232 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFL-SVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++KP E + L R+ + Sbjct: 71 QERYR-----AITSAYYRGALGALLVYDVTKPTTF-ENVSRWLKELRDHADSNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ R V + + A Sbjct: 120 ------------------------------IMLIGNKTDLKH-----LRAVATEDAQSYA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 G + I TS+ T + K+ I + KS+S++ S P +I G Sbjct: 145 EKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKKSLSSEESAPASIKDGK 196 >gi|5902803|sp|P28188|ARA5_ARATH Ras-related protein ARA-5 gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana] Length = 258 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 78/270 (28%), Gaps = 55/270 (20%) Query: 14 AAEVRSRESR--TDEEEAEEEDAHFPSQR----TVFFMGSKAGGKTTILLRFLERD--ET 65 +E R R+ + + + +G GK+ +LLRF + E+ Sbjct: 32 KSEKRERDLWLCIARCSSSHRSKTMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVES 91 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 T+ +++ R + +W+ G + + +++V D+ Sbjct: 92 YISTIGVDF--KIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAH----GIIIVYDV 145 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPV 185 + + ++ L L Sbjct: 146 TDEESF-NNVKQWLSEIDRYASDNVNKL-------------------------------- 172 Query: 186 PLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLA 245 +VG+K D+ E R + +T + A G + TS+K T + ++ ++ Sbjct: 173 ---LVGNKSDLT-----ENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASI 224 Query: 246 FGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 + + P G + G Sbjct: 225 KERMASQPAGNNARPPTVQIRGQPVAQKNG 254 >gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum] Length = 218 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 75/240 (31%), Gaps = 53/240 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ R+ + A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFA--TRSLNVDGKVIKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ + E +E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHSTF-ENVERWLRELRDHTDPNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ V + + A Sbjct: 121 ------------------------------VMLVGNKSDLRHLV-----AVSTEDGKSFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + + + + + K++ T + +I Sbjct: 146 EKESLYFMETSALEATNVEIAFAEVLTQIYNIVSKKAMETSDDGAASAVPSK--GEKIDV 203 >gi|147789804|emb|CAN62934.1| hypothetical protein [Vitis vinifera] gi|157348632|emb|CAO23524.1| unnamed protein product [Vitis vinifera] Length = 223 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 36/250 (14%), Positives = 75/250 (30%), Gaps = 51/250 (20%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ +L RF + +K T+ +E+ A K +W+ G Sbjct: 16 FKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKAVKA--QIWDTAG 73 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + M L R +K Sbjct: 74 QERYR-----AVTSAYYRGAVGAMLVYDMTKRQSFDH-MARWLEELRGHADKNIV----- 122 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ R V + + A Sbjct: 123 ------------------------------IMLIGNKSDLG-----SLRAVPTEDAQEFA 147 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + + + + K+++ + + ++I Sbjct: 148 ERENLFFMETSALEATNVETAFLTVLTDIYKIISKKTLTANTDTDSTGSSTLLKGTKIIV 207 Query: 277 PVATEVDIGT 286 P + Sbjct: 208 PGGPDSAAQK 217 >gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa (japonica cultivar-group)] gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa (japonica cultivar-group)] gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa (japonica cultivar-group)] gi|125527190|gb|EAY75304.1| hypothetical protein OsI_003151 [Oryza sativa (indica cultivar-group)] gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_002850 [Oryza sativa (japonica cultivar-group)] Length = 224 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 72/250 (28%), Gaps = 55/250 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + + T+ +E+ K +W+ G Sbjct: 20 FKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKA--QIWDTAG 77 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ ++V D+++ E E L R+ + Sbjct: 78 QERYR-----AITSAYYRGAVGALVVYDVTRRITF-ENAERWLKELRDHTDANIV----- 126 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + R A Sbjct: 127 ------------------------------VMLVGNKADLRH-----LRAVPAEDARAFA 151 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD---SLSQ 273 +G + TS+ T + + + + + ++ P A P G S Sbjct: 152 EAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNALDIG-DDPAAPPRGRTIDVSAKD 210 Query: 274 IGPPVATEVD 283 Sbjct: 211 DAVTPVNSSG 220 >gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding [Arabidopsis thaliana] gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana] gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana] gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana] Length = 217 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 71/231 (30%), Gaps = 52/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ K +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKA--QIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E +E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHVTF-ENVERWLKELRDHTDANIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++ VG+K D+ R V + + A Sbjct: 121 ------------------------------IMFVGNKADLRH-----LRAVSTEDAKAFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A+P G Sbjct: 146 ERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIG-DDPAALPKG 195 >gi|147802502|emb|CAN73117.1| hypothetical protein [Vitis vinifera] Length = 215 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 75/232 (32%), Gaps = 51/232 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ IL RF + +K T+ +E+ T K +W+ G Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKTVKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K E ++ L R+ + Sbjct: 71 QERYR-----AITSAYYRGAVGALLVYDITKRQTF-ENVQRWLRELRDHADSNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++ G+K D+ R V + LA Sbjct: 120 ------------------------------IMMAGNKSDLNH-----LRAVSGDDAQILA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 G S + TS+ + K+ I + K+++ + + +P G+ Sbjct: 145 EKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASINLPHGT 196 >gi|50292391|ref|XP_448628.1| unnamed protein product [Candida glabrata] gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata CBS 138] Length = 221 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 67/246 (27%), Gaps = 53/246 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +L RF + +K T+ +E+ K A +W+ G Sbjct: 15 FKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVED--KKIKAQIWDTAG 72 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ ++V D+SK +E L + + Sbjct: 73 QERYR-----AITSAYYRGAVGALIVYDISKSGT-YENCNHWLTELKENADDNV------ 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 + ++G+K D+ R V + R A Sbjct: 121 -----------------------------AIGLIGNKSDLEH-----LRAVPTEEARGFA 146 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 TS+ + + + + + + D + +G+ I Sbjct: 147 SENQLFFTETSALNSENVDLAFRELIEQIYKMVNK--HQVDLGENAKGSSGAPKGPTISL 204 Query: 277 PVATEV 282 Sbjct: 205 APVPGE 210 >gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum] gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba] gi|738937|prf||2001457E GTP-binding protein gi|1098295|prf||2115367C small GTP-binding protein Length = 217 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 75/235 (31%), Gaps = 51/235 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ + A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD--SKVIKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E ++ L RN + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHATF-ENVDRWLKELRNHTDSNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ V + + A Sbjct: 121 ------------------------------VMLVGNKADLRHLV-----AVSTEDGKSYA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + TS+ T + + + + + K++ + ++PA + + Sbjct: 146 EKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKTVEGAENGNASVPAKGEKI 200 >gi|157358689|emb|CAO66374.1| unnamed protein product [Vitis vinifera] Length = 217 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 72/231 (31%), Gaps = 52/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD--KVVKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E +E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHVTF-ENVERWLKELRDHTDSNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 121 ------------------------------IMLVGNKADLRH-----LRAVSTEDAKAFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A+P G Sbjct: 146 ERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIG-DDPAALPKG 195 >gi|17507543|ref|NP_490675.1| RAB family member (rab-11.1) [Caenorhabditis elegans] gi|2088715|gb|AAB54158.1| Rab family protein 11.1 [Caenorhabditis elegans] Length = 211 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 73/222 (32%), Gaps = 51/222 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ + T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHVT-YENVERWLKELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEAKIYA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 S I TS+ T + + + I + + K + TD Sbjct: 144 ERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTDR 185 >gi|85002141|gb|ABC68472.1| Rab6A [Marsupenaeus japonicus] Length = 212 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 84/245 (34%), Gaps = 51/245 (20%) Query: 35 HFPSQRTVFFMGSKAGGKTTILLRFL--ERDETAKPTLALEYTFGRRARGHNTPKDIAHL 92 + + + F+G ++ GKT+++ RF+ D T + T+ +++ T L Sbjct: 7 NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTV--RLQL 64 Query: 93 WELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAA 152 W+ G L+ I V+V D++ N+ + R + Sbjct: 65 WDTAGQERFRSLIPSYIRDS----TVAVVVYDITNANSF-HQTSKWIDDVRTERGSDVI- 118 Query: 153 LQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTL 212 +++VG+K D+ S+KR+V + Sbjct: 119 ----------------------------------IVLVGNKTDL-----SDKRQVSTEEG 139 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 A I TS+K+ + + + G E ++ D ++ + S++ + Sbjct: 140 ERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTENKKVDMTEVVL--RDSENAA 197 Query: 273 QIGPP 277 IG Sbjct: 198 DIGRT 202 >gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca coagulata] Length = 215 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 73/243 (30%), Gaps = 54/243 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLRELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARTFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K I P ++ I Sbjct: 144 ERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQKQI---RDPPEGDTIRPTNVEAIDV 200 Query: 277 PVA 279 Sbjct: 201 KPT 203 >gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max] Length = 217 Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 77/235 (32%), Gaps = 51/235 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ R ++ A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFA--TRTLDVDSKVIKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E ++ L RN + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRQATF-ENVDRWLKELRNHTDANIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ V + + A Sbjct: 121 ------------------------------VMLVGNKSDLRHLV-----AVSTEDGKSYA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + TS+ T + + + + + K++ + ++PA + + Sbjct: 146 EKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAVEVAENGTTSVPAKGEKI 200 >gi|125552993|gb|EAY98702.1| hypothetical protein OsI_019935 [Oryza sativa (indica cultivar-group)] Length = 220 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 31/242 (12%), Positives = 68/242 (28%), Gaps = 55/242 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + + +K T+ +E+ A +W+ G Sbjct: 18 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVD--GKVIKAQIWDTAG 75 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ + + L R+ + Sbjct: 76 QERYR-----AITSAYYRGAVGALLVYDVTRRATF-DNVGRWLRELRDHTDPSIV----- 124 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++G+K D+ V + + A Sbjct: 125 ------------------------------CMLIGNKSDLRHLV-----AVSTEDGKEFA 149 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + + + + + K + G +I Sbjct: 150 EAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPEDGSAGPGKG----EKINV 205 Query: 277 PV 278 Sbjct: 206 KD 207 >gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp Length = 191 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 66/210 (31%), Gaps = 51/210 (24%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 30 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 87 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 88 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 136 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 137 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 161 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAF 246 G S I TS+ T + + I + Sbjct: 162 EKNGLSFIETSALDSTNVEAAFQTILTEIY 191 >gi|70990240|ref|XP_749969.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293] gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293] Length = 204 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 72/231 (31%), Gaps = 51/231 (22%) Query: 41 TVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGG 98 TV +G GK+ +L RF + +K T+ +E+ + A +W+ G Sbjct: 5 TVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVD--SKTIKAQIWDTAGQ 62 Query: 99 ISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 IT+ +LV D+SK ++ + L R+ + Sbjct: 63 ERYR-----AITSAYYRGAVGALLVYDISKHQT-YDNVNRWLKELRDHADSNIV------ 110 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +++VG+K D+ R V + A Sbjct: 111 -----------------------------IMLVGNKSDLRH-----LRAVPTDEAKQFAS 136 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 S I TS+ + + + I + K++ S + +G Sbjct: 137 ENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGDSGQAPLSSGR 187 >gi|145229443|ref|XP_001389030.1| hypothetical protein An01g06060 [Aspergillus niger] gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger] Length = 211 Score = 198 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 75/248 (30%), Gaps = 60/248 (24%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ + A +W+ G Sbjct: 10 FKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVD--SKTIKAQIWDTAG 67 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+SK ++ + L R+ + Sbjct: 68 QERYR-----AITSAYYRGAVGALLVYDISKHQT-YDNVNRWLKELRDHADSNIV----- 116 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 117 ------------------------------IMLVGNKSDLRH-----LRAVPTEEAKQFA 141 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS---------TDPSKPLAIPAG 267 S I TS+ + + + I + K++ D + I Sbjct: 142 SENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGDAGQTVLGDRRDMVRIDES 201 Query: 268 SDSLSQIG 275 D ++ G Sbjct: 202 EDPKTKQG 209 >gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181] gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181] Length = 224 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 73/234 (31%), Gaps = 51/234 (21%) Query: 38 SQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWEL 95 Q ++ +G GK+ +L RF + +K T+ +E+ + A +W+ Sbjct: 22 PQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVD--SKTIKAQIWDT 79 Query: 96 GGGISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQ 154 G IT+ +LV D+SK ++ + L R+ + Sbjct: 80 AGQERYR-----AITSAYYRGAVGALLVYDISKHQT-YDNVNRWLKELRDHADSNIV--- 130 Query: 155 KTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRF 214 +++VG+K D+ R V + Sbjct: 131 --------------------------------IMLVGNKSDLRH-----LRAVPTDEAKQ 153 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 A S I TS+ + + + I + K++ S + +G Sbjct: 154 FASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGDSGQAPLSSGR 207 >gi|15222396|ref|NP_172221.1| AtRABA2b (Arabidopsis Rab GTPase homolog A2b); GTP binding [Arabidopsis thaliana] Length = 214 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 73/240 (30%), Gaps = 53/240 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ IL RF + +K T+ +E+ T K +W+ G Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K E + L R+ + Sbjct: 71 QERYR-----AITSAYYRGAVGALLVYDITKRQTF-ENVLRWLRELRDHADSNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++ G+K D+ R V + R LA Sbjct: 120 ------------------------------IMMAGNKSDLNH-----LRSVADEDGRSLA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S + TS+ T + K+ I + K+++ G + I Sbjct: 145 EKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQE--AAGNLPGQGTAINISD 202 >gi|157354705|emb|CAO48023.1| unnamed protein product [Vitis vinifera] Length = 218 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 33/240 (13%), Positives = 74/240 (30%), Gaps = 53/240 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ R+ + A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFA--TRSLNVDGKVIKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ + E +E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHSTF-ENVERWLRELRDHTDPNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ V + + A Sbjct: 121 ------------------------------VMLIGNKSDLRHLV-----AVSTEDGKSFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + + + + + K++ + +I Sbjct: 146 ERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMEAGDDGAASAVPSK--GEKIDV 203 >gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa] Length = 215 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 70/231 (30%), Gaps = 52/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +L RF + +K T+ +E+ K +W+ G Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDKIVKA--QIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E +E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHVTF-ENVERWLKELRDHTDANIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++ VG+K D+ R V + + A Sbjct: 121 ------------------------------IMFVGNKADLRH-----LRAVSTEDAKAFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A+P G Sbjct: 146 ERENTYFMETSALESLNVENAFTEVLTQIYHVVSRKALDIG-DDPAALPKG 195 >gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum] gi|738935|prf||2001457C GTP-binding protein Length = 225 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 44/251 (17%), Positives = 79/251 (31%), Gaps = 52/251 (20%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ IL RF + +K T+ +E+ H T K +W+ G Sbjct: 18 FKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKA--QIWDTAG 75 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + L RN +K Sbjct: 76 QERYR-----AVTSAYYRGAVGAMLVYDITKRQTFDH-IPRWLEELRNHADKNIV----- 124 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ +R V + + A Sbjct: 125 ------------------------------IILVGNKSDL-----ENQRDVPTEDAKEFA 149 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G + TS+ T + S + + K+++ D S+ A +I Sbjct: 150 EKEGLFFLETSALQATNVEASFMTVLTEIYNILNKKNLAADESQGNGNSASLLG-QKIVI 208 Query: 277 PVATEVDIGTL 287 P + Sbjct: 209 PGPGQEVPAKS 219 >gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa (japonica cultivar-group)] gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa (japonica cultivar-group)] gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa (japonica cultivar-group)] gi|125594884|gb|EAZ34943.1| hypothetical protein OsJ_018426 [Oryza sativa (japonica cultivar-group)] Length = 220 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 31/242 (12%), Positives = 68/242 (28%), Gaps = 55/242 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + + +K T+ +E+ A +W+ G Sbjct: 18 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVD--GKVIKAQIWDTAG 75 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ + + L R+ + Sbjct: 76 QERYR-----AITSAYYRGAVGALLVYDVTRRATF-DNVGRWLRELRDHTDPSIV----- 124 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++G+K D+ V + + A Sbjct: 125 ------------------------------CMLIGNKSDLRHLV-----AVSTEDGKEFA 149 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + + + + + K + G +I Sbjct: 150 EAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPEDGSAGPGKG----EKINV 205 Query: 277 PV 278 Sbjct: 206 KD 207 >gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1] gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1] Length = 230 Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 75/246 (30%), Gaps = 60/246 (24%) Query: 42 VFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GK+ +L RF + +K T+ +E+ + A +W+ G Sbjct: 31 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVD--SKTIKAQIWDTAGQE 88 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 IT+ +LV D+SK ++ + L R+ + Sbjct: 89 RYR-----AITSAYYRGAVGALLVYDISKHQT-YDNVNRWLKELRDHADSNIV------- 135 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ R V + A Sbjct: 136 ----------------------------IMLVGNKSDLRH-----LRAVPTDEAKQFASE 162 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS---------TDPSKPLAIPAGSD 269 S I TS+ + + + I + K+I + + + D Sbjct: 163 NNLSFIETSALDASNVELAFQNILTEIYRIVSSKAIIEGGDSGQATLSSGRTIEVSKTPD 222 Query: 270 SLSQIG 275 + S+ G Sbjct: 223 TESKQG 228 >gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa] gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A] Length = 214 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 73/240 (30%), Gaps = 54/240 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ + A +W+ G Sbjct: 10 FKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVD--SKTIKAQIWDTAG 67 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+SK E + L R+ ++ Sbjct: 68 QERYR-----AITSAYYRGAVGALLVYDISKGVTF-ENVNRWLKELRDHADQNIV----- 116 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 117 ------------------------------IMLVGNKSDLRH-----LRAVPTEDAKKFA 141 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + + I + K+ + P G +LS Sbjct: 142 EENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNF---DNGPSGSNEGHQNLSGQSI 198 >gi|115478587|ref|NP_001062887.1| Os09g0327100 [Oryza sativa (japonica cultivar-group)] gi|113631120|dbj|BAF24801.1| Os09g0327100 [Oryza sativa (japonica cultivar-group)] Length = 257 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 71/231 (30%), Gaps = 52/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 54 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD--KVVKAQIWDTAG 111 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ ++V D+++ E +E L R+ + Sbjct: 112 QERYR-----AITSAYYRGAVGALVVYDVTRHVTF-ENVERWLKELRDHTDANIV----- 160 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 161 ------------------------------IMLVGNKADLRH-----LRAVSVEDAKGFA 185 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A P G Sbjct: 186 ERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIG-DDPAAPPRG 235 >gi|3024505|sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D gi|623580|gb|AAA74114.1| putative Length = 222 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 52/242 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ IL RF + +K T+ +E+ A H + K +W+ G Sbjct: 16 FKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKA--QIWDTAG 73 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + L R ++ + Sbjct: 74 QERYR-----AVTSAYYRGAVGAMLVYDITKRQTFDH-IPRWLEELRAHADRNIVIM--- 124 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++G+K D+ ++R V + + A Sbjct: 125 --------------------------------LIGNKTDL-----EDQRAVPTEDAKEFA 147 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G + TS+ T + + + F K+++ D ++ PA + +I Sbjct: 148 QKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASL-TGKKILV 206 Query: 277 PV 278 P Sbjct: 207 PG 208 >gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe] gi|141306|sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 (RAB) gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe] gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe] gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe] Length = 214 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 72/231 (31%), Gaps = 52/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 +G GK+ +L+RF + +K T+ +E+ K A +W+ G Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLD--NKKIKAQIWDTAG 68 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ ++V D++K ++ + + L R + Sbjct: 69 QERYR-----AITSAYYRGAVGALIVYDITKQSSF-DNVGRWLKELREHADSNIV----- 117 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 118 ------------------------------IMLVGNKTDLLH-----LRAVSTEEAQAFA 142 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 S I TS+ + + ++ + F +S+ + AG Sbjct: 143 AENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAG-DDGVHPTAG 192 >gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa (japonica cultivar-group)] gi|109940140|sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa] gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa (japonica cultivar-group)] gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_022529 [Oryza sativa (indica cultivar-group)] Length = 217 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 70/242 (28%), Gaps = 55/242 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 15 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVD--GKVVKAQIWDTAG 72 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ + E +E L R+ + Sbjct: 73 QERYR-----AITSAYYRGAVGALLVYDVTRHSTF-ENVERWLKELRDHTDPNIV----- 121 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ V + A Sbjct: 122 ------------------------------VMLVGNKSDLRHLV-----AVQTDEGKAFA 146 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + + + + + +S+ G +I Sbjct: 147 ERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSGPGKG----EKINI 202 Query: 277 PV 278 Sbjct: 203 KD 204 >gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia] Length = 203 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 72/238 (30%), Gaps = 49/238 (20%) Query: 40 RTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +LLRF + E+ T+ +++ R + +W+ G Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTIKLQIWDTAG 66 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 + + +++V D++ + ++ L L Sbjct: 67 QERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLSEIDRYASDSVNKL---- 117 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +VG+K D+ ++ V +T + A Sbjct: 118 -------------------------------LVGNKCDLT-----AQKVVSTETAQAFAD 141 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 G + TS+K+ T + ++ + + S + P G + G Sbjct: 142 EIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSG 199 >gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS] gi|90301160|gb|EAS30791.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS] Length = 227 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 75/247 (30%), Gaps = 53/247 (21%) Query: 42 VFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G GK+ +L RF + +K T+ +E+ + + +W+ G Sbjct: 29 LVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVD--SKTIKSQIWDTAGQE 86 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 IT+ +LV D+SK +E + L R+ + Sbjct: 87 RYR-----AITSAYYRGAVGALLVYDISKHQT-YENVTRWLKELRDHADSNIV------- 133 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ R V + + A Sbjct: 134 ----------------------------IMLVGNKSDLRH-----LRAVPTEEAKQFASD 160 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPV 278 S I TS+ + + + I F K++ D P + +I Sbjct: 161 NNLSFIETSALDASNVELAFQNILTEIFRIVSSKAL--DSGDSAQNPLSDRKVVEITKTQ 218 Query: 279 ATEVDIG 285 E G Sbjct: 219 DPESKQG 225 >gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa] Length = 203 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 72/238 (30%), Gaps = 49/238 (20%) Query: 40 RTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +LLRF + E+ T+ +++ R + +W+ G Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTIKLQIWDTAG 66 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 + + +++V D++ + ++ L + L Sbjct: 67 QERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVNKL---- 117 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +VG+K D+ + + V +T + A Sbjct: 118 -------------------------------LVGNKCDLTAN-----KVVSYETAKAFAD 141 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 G + TS+K+ T + ++ + + + P G + G Sbjct: 142 EIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNNARPPTVQIRGQPVNQKSG 199 >gi|267527|sp|Q01111|YPT3_NICPL Ras-related protein YPT3 gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia] Length = 218 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 78/250 (31%), Gaps = 53/250 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNID--NKVIKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ +E + L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHVT-YENVTRWLKELRDHTDPNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ V + LA Sbjct: 121 ------------------------------VMLIGNKSDLRHLV-----AVSTDEAKGLA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIST-DPSKPLAIPAGSDSLSQIG 275 G + TS+ T + + + + K++ D + P ++++ I Sbjct: 146 EREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETIN-IK 204 Query: 276 PPVATEVDIG 285 ++ G Sbjct: 205 DEGSSWKKFG 214 >gi|147844837|emb|CAN83336.1| hypothetical protein [Vitis vinifera] gi|157344444|emb|CAO69827.1| unnamed protein product [Vitis vinifera] Length = 216 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 77/245 (31%), Gaps = 56/245 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + + +K T+ +E+ A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVD--EKVVKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E ++ L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHVTF-ENVDRWLKELRDHTDSSIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 121 ------------------------------IMLVGNKADLGH-----LRAVSTEDAKAYA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPS-----KPLAIPAGSDSL 271 I TS+ T + + + + + K++ T K I G D + Sbjct: 146 EKESTFFIETSALESTNVENAFTEVLTQIYHVVSRKALETGDEAATVPKGQTINVGKDDV 205 Query: 272 SQIGP 276 S I Sbjct: 206 SAIKI 210 >gi|157328625|emb|CAO22323.1| unnamed protein product [Vitis vinifera] Length = 203 Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 71/238 (29%), Gaps = 49/238 (20%) Query: 40 RTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +LLRF + E+ T+ +++ R + +W+ G Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTIKLQIWDTAG 66 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 + + +++V D++ + ++ L + L Sbjct: 67 QERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVNKL---- 117 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +VG+K D+ + + V +T + A Sbjct: 118 -------------------------------LVGNKCDLTAN-----KVVSYETAKAFAD 141 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 G + TS+K+ T + ++ + + P G + G Sbjct: 142 EIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNTARPPTVQIRGQPVNQKSG 199 >gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa] Length = 217 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 70/242 (28%), Gaps = 55/242 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 15 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVD--GKVVKAQIWDTAG 72 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ + E +E L R+ + Sbjct: 73 QERYR-----AITSAYYRGAVGALLVYDVTRHSTF-ENVERWLKELRDHTDPNIV----- 121 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ V + A Sbjct: 122 ------------------------------VMLVGNKSDLRHLV-----AVQTDEGKAFA 146 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + + + + + +S+ G +I Sbjct: 147 ERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSGPGKG----EKINI 202 Query: 277 PV 278 Sbjct: 203 KD 204 >gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (japonica cultivar-group)] gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa (japonica cultivar-group)] gi|125550513|gb|EAY96222.1| hypothetical protein OsI_017455 [Oryza sativa (indica cultivar-group)] gi|125592518|gb|EAZ32577.1| hypothetical protein OsJ_016060 [Oryza sativa (japonica cultivar-group)] Length = 220 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 69/222 (31%), Gaps = 51/222 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ A +W+ G Sbjct: 15 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVE--GKIIKAQIWDTAG 72 Query: 98 GISLSDLVQIPITADNVSFL-SVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ VLV D+SKP + + L R+ + Sbjct: 73 QERYR-----AITSAYYRGALGAVLVYDVSKPTTF-DNISRWLKELRDHADANIR----- 121 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V A Sbjct: 122 ------------------------------IMLVGNKTDLKH-----LRAVATDDAHKFA 146 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 G S I TS+ T + ++ I + K +++D Sbjct: 147 EAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVASDE 188 >gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis thaliana] Length = 220 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 75/253 (29%), Gaps = 57/253 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GKT +L RF + +K T+ +E+ + T K +W+ G Sbjct: 16 FKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKA--QIWDTAG 73 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + M L R +K + Sbjct: 74 QER-------AVTSAYYRGAVGAMLVYDMTKRQSFDH-MAKWLEELRGHADKNIVIM--- 122 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++G+K D+ R V + + A Sbjct: 123 --------------------------------LIGNKCDLG-----SLRAVPTEDAQEFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + + I + KS++ D G+ SL + Sbjct: 146 QRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDDA----DGNSSLLKGTR 201 Query: 277 PVATEVDIGTLHA 289 + Sbjct: 202 IIIPSEQESGKRG 214 >gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis] gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis] Length = 202 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 70/238 (29%), Gaps = 49/238 (20%) Query: 40 RTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +LLRF + E+ T+ +++ R + +W+ G Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTIKLQIWDTAG 66 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 + + +++V D++ + ++ L + L Sbjct: 67 QERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVNKL---- 117 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 +VG+K D+ + R V T + A Sbjct: 118 -------------------------------LVGNKCDLTAN-----RAVDYDTAKAFAD 141 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 G + TS+K+ T + ++ + + G + + G Sbjct: 142 EIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNSSRPATVQMKGQPVVQKSG 199 >gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana] Length = 224 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 84/246 (34%), Gaps = 54/246 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ +L RF + +K T+ +E+ + A +W+ G Sbjct: 18 FKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQ--KSIKAQIWDTAG 75 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + L R +K Sbjct: 76 QERYR-----AVTSAYYRGAVGAMLVYDMTKRETFEH-IPRWLEELRAHADKNIV----- 124 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ ++R V + + A Sbjct: 125 ------------------------------IILIGNKSDL-----EDQRAVPTEDAKEFA 149 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G + TS+ + T + S + + + T K+++++ + GS + +I Sbjct: 150 EKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASECD---SNNPGSLAGKKILI 206 Query: 277 PVATEV 282 P + + Sbjct: 207 PGSGQE 212 >gi|125605011|gb|EAZ44047.1| hypothetical protein OsJ_027530 [Oryza sativa (japonica cultivar-group)] Length = 229 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 68/223 (30%), Gaps = 51/223 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 19 FKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKA--QIWDTAG 76 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + + L R +K Sbjct: 77 QERYR-----AVTSAYYRGAVGAMLVYDITKRQSFDH-VARWLEELRGHADKNIV----- 125 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ R V + + A Sbjct: 126 ------------------------------IMLIGNKSDLGT-----LRVVPTEDAKEFA 150 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPS 259 + TS+ T + + + + K++ + Sbjct: 151 ERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEE 193 >gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum] Length = 228 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 70/232 (30%), Gaps = 53/232 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF +K T+ +E+ A +W+ G Sbjct: 28 FKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNID--GKVIKAQIWDTAG 85 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ ++V D+ K + + S L R+ EK Sbjct: 86 QERYR-----AITSAYYRGAVGALVVYDVCKLQSF-HNLTSWLNELRDHAEKNIV----- 134 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + RF A Sbjct: 135 ------------------------------MMLVGNKCDLRH-----LRNVGTEDARFFA 159 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKS--ISTDPSKPLAIPA 266 G S I TS+ T + ++ I Q + + D L Sbjct: 160 QQQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHPPVNNIDMKMSLHNNP 211 >gi|15219955|ref|NP_173136.1| RAB11 (ARABIDOPSIS RAB GTPASE HOMOLOG A1B); GTP binding [Arabidopsis thaliana] gi|3024526|sp|Q39222|RB11B_ARATH Ras-related protein Rab11 gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana] gi|451860|gb|AAA32872.1| small GTP-binding protein gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana] gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana] Length = 216 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 70/231 (30%), Gaps = 51/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVD--GKVVKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E ++ L +N + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRRATF-ENVDRWLKELKNHTDPNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ V + + A Sbjct: 121 ------------------------------VMLVGNKSDLRH-----LLAVPTEDGKSYA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ T + + + + + K + ++P G Sbjct: 146 EQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKG 196 >gi|15218719|ref|NP_174177.1| AtRABA1i (Arabidopsis Rab GTPase homolog A1i); GTP binding [Arabidopsis thaliana] gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana] gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana] Length = 218 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 74/250 (29%), Gaps = 58/250 (23%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V G GK+ +L RF D ++ T+ +E+ K +W+ G Sbjct: 14 FKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKA--QIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E +E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHVTF-ENVERWLKELRDHTDANIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R + + + A Sbjct: 121 ------------------------------IMLVGNKADLRH-----LRAISTEEAKAFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA-------GSD 269 + TS+ + + + + + K++ A+P G D Sbjct: 146 ERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPTTALPKGQMINVGGRD 205 Query: 270 SLSQIGPPVA 279 +S + P Sbjct: 206 DISAVKKPGC 215 >gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa (japonica cultivar-group)] gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa (japonica cultivar-group)] Length = 215 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 76/236 (32%), Gaps = 51/236 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ IL RF + +K T+ +E+ T K +W+ G Sbjct: 13 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K E ++ L R+ + Sbjct: 71 QERYR-----AITSAYYRGAVGALLVYDITKKQTF-ENIQRWLRELRDHADSNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + LA Sbjct: 120 ------------------------------IMMVGNKSDLNH-----LRSVPEEDGQALA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 G S + TS+ + K+ I + K+++ + P +++ Sbjct: 145 EKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQEAAGSGPPTQGTTIN 200 >gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba] gi|1098294|prf||2115367B small GTP-binding protein Length = 207 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 72/231 (31%), Gaps = 52/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + + +K T+ +E+ A +W+ G Sbjct: 4 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD--KVVKAQIWDTAG 61 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E +E L R+ + Sbjct: 62 QERYR-----AITSAYYRGAVGALLVYDVTRHVTF-ENVERWLKELRDHTDANIV----- 110 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 111 ------------------------------VMLVGNKADLRH-----LRAVSTEDSTAFA 135 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A+P G Sbjct: 136 ERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIG-DDPAALPKG 185 >gi|17137216|ref|NP_477170.1| Rab-protein 11 CG5771-PB, isoform B [Drosophila melanogaster] gi|19549675|ref|NP_599137.1| Rab-protein 11 CG5771-PA, isoform A [Drosophila melanogaster] gi|125776219|ref|XP_001359206.1| GA19116-PA [Drosophila pseudoobscura] gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster] gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster] gi|7300703|gb|AAF55850.1| CG5771-PA, isoform A [Drosophila melanogaster] gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster] gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster] gi|23171847|gb|AAN13849.1| CG5771-PB, isoform B [Drosophila melanogaster] gi|54638949|gb|EAL28351.1| GA19116-PA [Drosophila pseudoobscura] Length = 214 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 43/243 (17%), Positives = 78/243 (32%), Gaps = 54/243 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ R+ + A +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFA--TRSIEVDGKTIKAQIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLRELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRSVPTDEAKLFA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G S I TS+ T + + I + K I P + P+ ++ I Sbjct: 144 ERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDVIRPS---NVEPIDV 200 Query: 277 PVA 279 Sbjct: 201 KPT 203 >gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum] Length = 218 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 75/240 (31%), Gaps = 53/240 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ R+ + A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFA--TRSLNVDGKVIKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ + E +E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHSTF-ENVERWLRELRDHTDPNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ V + + A Sbjct: 121 ------------------------------VMLVGNKSDLRHLV-----AVSTEDGKSFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + S + + + K++ T + +I Sbjct: 146 EKESLYFMETSALEATNVEISFAEVLTQIYNVISKKAMETSDDGAASAVPSK--GEKIDV 203 >gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa (japonica cultivar-group)] gi|109940138|sp|Q40723|RGP2_ORYSJ Ras-related protein RGP2 (GTP-binding regulatory protein RGP2) gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa (japonica cultivar-group)] gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa (japonica cultivar-group)] gi|125551654|gb|EAY97363.1| hypothetical protein OsI_018596 [Oryza sativa (indica cultivar-group)] gi|125593585|gb|EAZ33644.1| hypothetical protein OsJ_017127 [Oryza sativa (japonica cultivar-group)] gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa (indica cultivar-group)] Length = 217 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 75/246 (30%), Gaps = 52/246 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ IL RF +K T+ +E+ T K +W+ G Sbjct: 13 FKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K + + + L R+ + Sbjct: 71 QERYR-----AITSAYYRGAVGALLVYDITKRQSF-DNVHRWLRELRDHADSSIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + LA Sbjct: 120 ------------------------------IMMVGNKSDLIH-----LRAVSEDEGKALA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G + TS+ + ++ I +G K+++ + + P S I Sbjct: 145 EKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKALAAKEAAAASAPLPSQG-KTISI 203 Query: 277 PVATEV 282 A Sbjct: 204 DSAAGN 209 >gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis thaliana] Length = 216 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 70/231 (30%), Gaps = 51/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVD--GKVVKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E ++ L +N + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRRATF-ENVDRWLKELKNHTDPNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ V + + A Sbjct: 121 ------------------------------VMLVGNKSDLRH-----LLAVPTEDGKSYA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ T + + + + + K + ++P G Sbjct: 146 EQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKG 196 >gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum] Length = 218 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 34/250 (13%), Positives = 73/250 (29%), Gaps = 53/250 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNID--GKVIKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT +LV D+++ E + L R+ + Sbjct: 72 QERYR-----AITIAYYRGAVGALLVYDVTRHVTF-ENVNRWLKELRDHTDPNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ V + + LA Sbjct: 121 ------------------------------VMLLGNKSDLRHLV-----AVSTEEAKSLA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIST-DPSKPLAIPAGSDSLSQIG 275 + TS+ T + + + + K++ D P +++ I Sbjct: 146 EREALYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSTAPPKGQTIN-IK 204 Query: 276 PPVATEVDIG 285 + G Sbjct: 205 DEGSAWKKFG 214 >gi|3024502|sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus] Length = 218 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 72/237 (30%), Gaps = 52/237 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVD--AKVVKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRRATF-ENAARWLKELRDHTDPNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ V + + A Sbjct: 121 ------------------------------VMLIGNKSDLRHLV-----AVPTEDGKSFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIST-DPSKPLAIPAGSDSLS 272 + TS+ T + + + + + +++ D +P+ +++ Sbjct: 146 ERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTIN 202 >gi|42543204|pdb|1OIW|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gtpgammas gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp And Pi Length = 191 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 66/210 (31%), Gaps = 51/210 (24%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ T K +W+ G Sbjct: 30 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA--QIWDTAG 87 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ + Sbjct: 88 LERYR-----AITSAYYRGAVGALLVYDIAKHLT-YENVERWLKELRDHADSNIV----- 136 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V R A Sbjct: 137 ------------------------------IMLVGNKSDLRH-----LRAVPTDEARAFA 161 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAF 246 G S I TS+ T + + I + Sbjct: 162 EKNGLSFIETSALDSTNVEAAFQTILTEIY 191 >gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis] Length = 219 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 67/223 (30%), Gaps = 51/223 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ IL RF + +K T+ +E+ H + K +W+ G Sbjct: 11 FKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKA--QIWDTAG 68 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + L RN + + Sbjct: 69 QERYR-----AVTSAYYRGAVGAMLVYDITKRQTFDH-VPRWLEELRNHADNNIVIM--- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +VG+K D+ R V + + A Sbjct: 120 --------------------------------LVGNKCDL-----DNLRAVPTEDAKEFA 142 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPS 259 G + TS+ T + + + F KS+ Sbjct: 143 QKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLIASQD 185 >gi|15237828|ref|NP_200723.1| AtRABA2d (Arabidopsis Rab GTPase homolog A2d); GTP binding [Arabidopsis thaliana] gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana] gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana] gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana] Length = 217 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 67/216 (31%), Gaps = 51/216 (23%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GKT IL RF + +K T+ +E+ T K +W+ G Sbjct: 13 FKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA--QIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K + + L R+ + Sbjct: 71 QERYR-----AITSAYYRGAVGALLVYDITKRQTF-DNVLRWLRELRDHADSNIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++ G+K D+ R V + + LA Sbjct: 120 ------------------------------IMMAGNKADLNH-----LRSVAEEDGQTLA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 G S + TS+ T + K+ + + K Sbjct: 145 ETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180 >gi|157745909|ref|XP_001668051.1| Hypothetical protein CBG03904 [Caenorhabditis briggsae] gi|39595276|emb|CAE60313.1| Hypothetical protein CBG03904 [Caenorhabditis briggsae] Length = 211 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 73/222 (32%), Gaps = 51/222 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + +K T+ +E+ + T K +W+ G Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKA--QIWDTAG 69 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D++K +E +E L R+ ++ Sbjct: 70 QERYR-----AITSAYYRGAVGALLVYDIAKHVT-YENVERWLKELRDHADQNIV----- 118 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 119 ------------------------------IMLVGNKSDLRH-----LRAVPTDEAKIYA 143 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 S I TS+ T + + + I + + K + +D Sbjct: 144 ERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGSDR 185 >gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_029863 [Oryza sativa (indica cultivar-group)] gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_027753 [Oryza sativa (japonica cultivar-group)] Length = 216 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 71/231 (30%), Gaps = 52/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ A +W+ G Sbjct: 13 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD--KVVKAQIWDTAG 70 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ ++V D+++ E +E L R+ + Sbjct: 71 QERYR-----AITSAYYRGAVGALVVYDVTRHVTF-ENVERWLKELRDHTDANIV----- 119 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + + A Sbjct: 120 ------------------------------IMLVGNKADLRH-----LRAVSVEDAKGFA 144 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A P G Sbjct: 145 ERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIG-DDPAAPPRG 194 >gi|15234020|ref|NP_193615.1| AtRABA1d/AtRab11B/AthSGBP (Arabidopsis Rab GTPase homolog A1d); GTP binding [Arabidopsis thaliana] gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana] gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana] gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana] gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana] gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana] Length = 214 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 74/240 (30%), Gaps = 55/240 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ R+ N A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFA--TRSLNVNEKVIKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ + E +E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHSTF-ENVERWLRELRDHTDPNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ V + + A Sbjct: 121 ------------------------------VMLVGNKSDLRHLV-----AVQTEDAKSFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 + TS+ T + + S + + K++ G +I Sbjct: 146 ENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGEDSGNVPSKG----EKIDV 201 >gi|85082713|ref|XP_956972.1| hypothetical protein ( (NM_017382) RAB11a, member RAS oncogene family [Mus musculus] sp|Q9JLX1|R11A_MOUSE RAS-RELATED PROTEIN RAB-11A gb|AAF36458.1|AF127669_1 (AF127669) small GTPase [Mus musculus] ) [Neurospora crassa OR74A] Length = 214 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 73/238 (30%), Gaps = 54/238 (22%) Query: 42 VFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 V +G GK+ +L RF + +K T+ +E+ + A +W+ G Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVD--SKTIKAQIWDTAGQE 69 Query: 100 SLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE 158 IT+ +LV D+SK E + L R+ ++ Sbjct: 70 RYR-----AITSAYYRGAVGALLVYDISKGVTF-ENVNRWLKELRDHADQNIV------- 116 Query: 159 SRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHF 218 +++VG+K D+ R V + + A Sbjct: 117 ----------------------------IMLVGNKSDLRH-----LRAVPTEDAKKFAEE 143 Query: 219 YGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 S I TS+ T + + I + K+ + P G +LS Sbjct: 144 NHLSFIETSALDATNVELAFQNILTEIYKIVSTKNF---DNGPSGSNEGHQNLSGQSI 198 >gi|3024503|sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C gi|623576|gb|AAA74112.1| putative Length = 222 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 43/250 (17%), Positives = 82/250 (32%), Gaps = 52/250 (20%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GKT IL RF + +K T+ +E+ H + K +W+ G Sbjct: 16 FKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKA--QIWDTAG 73 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + L R ++ + Sbjct: 74 QERYR-----AVTSAYYRGAVGAMLVYDITKRQTFDH-IPRWLEELRAHADRNIVIM--- 124 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 + G+K D+ ++R V + + A Sbjct: 125 --------------------------------LTGNKTDL-----EDQRAVPTEDAKEFA 147 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 G + TS+ T + + + F K+++ D ++ + PA + +I Sbjct: 148 QKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADENQSNSNPASL-TGKKILV 206 Query: 277 PVATEVDIGT 286 P +V G Sbjct: 207 PGPGQVIPGK 216 >gi|157338312|emb|CAO39356.1| unnamed protein product [Vitis vinifera] Length = 217 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 71/231 (30%), Gaps = 52/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + +K T+ +E+ K +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKA--QIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E +E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHVTF-ENVERWLKELRDHTDSHIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 121 ------------------------------IMLVGNKGDLRH-----LRAVSIDDAKAFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A+P G Sbjct: 146 ERENTFFMETSALESMNVENAFTEVLTQIYQVVSRKALDIG-DDPAALPKG 195 >gi|15236099|ref|NP_195709.1| ATGB3 (GTP-BINDING PROTEIN 3); GTP binding [Arabidopsis thaliana] gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana] gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana] gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana] gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana] Length = 224 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 85/248 (34%), Gaps = 58/248 (23%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G A GK+ +L RF + +K T+ +E+ + A +W+ G Sbjct: 18 FKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQ--KSIKAQIWDTAG 75 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 +T+ +LV D++K + L R +K Sbjct: 76 QERYR-----AVTSAYYRGAVGAMLVYDMTKRETFEH-IPRWLEELRAHADKNIV----- 124 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ ++R V + + A Sbjct: 125 ------------------------------IILIGNKSDL-----EDQRAVPTEDAKEFA 149 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIST--DPSKPLAIPAGSDSLSQI 274 G + TS+ + T + S + + + T K++++ D + P GS + +I Sbjct: 150 EKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSNNP-----GSLAGKKI 204 Query: 275 GPPVATEV 282 P + + Sbjct: 205 LIPGSGQE 212 >gi|3024529|sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus] Length = 218 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 72/237 (30%), Gaps = 52/237 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +L RF + +K T+ +E+ A +W+ G Sbjct: 14 FKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNID--GKVIKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ ET L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRSTTF-ETAGRWLKELRDHTDPNIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 ++++G+K D+ V + + A Sbjct: 121 ------------------------------VMLIGNKSDLRHLVT-----VSTEDGKAFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIST-DPSKPLAIPAGSDSLS 272 + TS+ T + + S + + +++ D +P+ +++ Sbjct: 146 EKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPSTSVVPSQGQTIN 202 >gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum] gi|738936|prf||2001457D GTP-binding protein Length = 217 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 72/231 (31%), Gaps = 52/231 (22%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 V +G GK+ +L RF + + + +K T+ +E+ A +W+ G Sbjct: 14 FKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDD--KVVKAQIWDTAG 71 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ +LV D+++ E +E L R+ + Sbjct: 72 QERYR-----AITSAYYRGAVGALLVYDVTRHVTF-ENVERWLKELRDHTDANIV----- 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 +++VG+K D+ R V + A Sbjct: 121 ------------------------------VMLVGNKADLRH-----LRAVSTEDSTSFA 145 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + TS+ + + + + + K++ P A+P G Sbjct: 146 EREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIG-DDPAALPKG 195 >gi|45191035|ref|NP_985289.1| AER434Cp [Ashbya gossypii ATCC 10895] gi|44984103|gb|AAS53113.1| AER434Cp [Ashbya gossypii ATCC 10895] Length = 219 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 67/252 (26%), Gaps = 54/252 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +L RF + +K T+ +E+ K A +W+ G Sbjct: 15 FKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVE--GKKVKAQIWDTAG 72 Query: 98 GISLSDLVQIPITADNVSFLS-VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT 156 IT+ ++V D+SK ++ +E L R ++ Sbjct: 73 QERYR-----AITSAYYRGAVGALIVYDISKSSS-YENCNHWLTELRENADENV------ 120 Query: 157 GESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLA 216 + ++G+K D+ R V + A Sbjct: 121 -----------------------------AVGLIGNKSDLAH-----LRAVPTDEAKNFA 146 Query: 217 HFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGP 276 TS+ + + + + + + + + I Sbjct: 147 QGNQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSENNGSGTVPRGPT---ISL 203 Query: 277 PVATEVDIGTLH 288 A Sbjct: 204 APAPSEKSKKKT 215 Searching..................................................done Results from round 5 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light inter... 386 e-105 gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain is... 383 e-104 gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 ligh... 382 e-104 gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermed... 381 e-104 gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain i... 381 e-104 gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein... 379 e-103 gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light int... 379 e-103 gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] 378 e-103 gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermed... 376 e-102 gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein... 371 e-101 gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Dan... 365 3e-99 gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 lig... 362 1e-98 gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 ... 358 3e-97 gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermed... 357 7e-97 gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chai... 352 2e-95 gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] 344 4e-93 gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] 334 6e-90 gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [S... 327 7e-88 gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein li... 321 4e-86 gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella... 319 2e-85 gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermed... 318 4e-85 gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermed... 317 6e-85 gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermedi... 316 1e-84 gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light interme... 316 1e-84 gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A is... 316 2e-84 gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [D... 315 2e-84 gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin li... 315 2e-84 gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo s... 315 2e-84 gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon n... 315 3e-84 gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light int... 315 3e-84 gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light ... 315 3e-84 gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo s... 314 5e-84 gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light interme... 313 1e-83 gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light ... 313 1e-83 gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light int... 312 2e-83 gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculu... 312 2e-83 gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermed... 312 3e-83 gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermed... 312 3e-83 gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermedi... 311 4e-83 gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-interm... 311 4e-83 gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 ... 311 4e-83 gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] 311 4e-83 gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light inte... 311 5e-83 gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light int... 310 8e-83 gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 ... 310 9e-83 gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermed... 310 1e-82 gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light inter... 308 4e-82 gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light... 308 5e-82 gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibencla... 307 6e-82 gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-interm... 305 3e-81 gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] 304 9e-81 gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light ... 302 2e-80 gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light inte... 299 2e-79 gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon n... 297 1e-78 gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] 294 6e-78 gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic,... 293 1e-77 gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] 292 3e-77 gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate ... 289 3e-76 gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] 288 4e-76 gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light inte... 288 5e-76 gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein li... 283 1e-74 gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A... 282 3e-74 gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein... 280 8e-74 gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin li... 276 2e-72 gi|157119433|ref|XP_001653379.1| conserved hypothetical protein ... 275 2e-72 gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosoph... 272 2e-71 gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [G... 272 3e-71 gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae s... 271 7e-71 gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon n... 270 7e-71 gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoob... 267 1e-69 gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, is... 263 2e-68 gi|157128066|ref|XP_001661298.1| dynein light intermediate chain... 260 1e-67 gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermed... 256 2e-66 gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermedi... 254 7e-66 gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Tr... 254 7e-66 gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938... 253 1e-65 gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] 252 2e-65 gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00... 250 7e-65 gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated fa... 250 9e-65 gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 ligh... 249 2e-64 gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae s... 247 6e-64 gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melano... 247 8e-64 gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella... 247 8e-64 gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [S... 245 3e-63 gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chai... 243 9e-63 gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] 242 2e-62 gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [... 240 8e-62 gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermedi... 237 7e-61 gi|149692307|ref|XP_001496560.1| PREDICTED: similar to rab11 [Eq... 235 4e-60 gi|114675154|ref|XP_001147785.1| PREDICTED: similar to GTP-bindi... 234 7e-60 gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, m... 234 7e-60 gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Tr... 232 2e-59 gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoob... 232 4e-59 gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light interme... 230 1e-58 gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa] 229 2e-58 gi|5902803|sp|P28188|ARA5_ARATH Ras-related protein ARA-5 >gnl|B... 229 2e-58 gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malas... 228 3e-58 gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus] 228 3e-58 gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis] >gnl|BL_O... 228 4e-58 gi|157328625|emb|CAO22323.1| unnamed protein product [Vitis vini... 228 4e-58 gi|149426497|ref|XP_001518037.1| PREDICTED: similar to rab11, pa... 228 5e-58 gi|73987203|ref|XP_854399.1| PREDICTED: similar to RAB11B, membe... 227 7e-58 gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos] 227 7e-58 gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncog... 227 1e-57 gi|84000297|ref|NP_001033251.1| hypothetical protein LOC534708 [... 227 1e-57 gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana ... 227 1e-57 gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] 227 1e-57 gi|4758984|ref|NP_004654.1| Ras-related protein Rab-11A [Homo sa... 227 1e-57 gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella... 227 1e-57 gi|57524801|ref|NP_001005827.1| Ras-related protein Rab-11A [Gal... 226 2e-57 gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis] 225 3e-57 gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa] 225 3e-57 gi|157341762|emb|CAO62317.1| unnamed protein product [Vitis vini... 225 3e-57 gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00... 225 4e-57 gi|6679583|ref|NP_033023.1| RAB11B, member RAS oncogene family [... 225 4e-57 gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens] 225 4e-57 gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicot... 225 5e-57 gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ust... 225 5e-57 gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097... 225 5e-57 gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Dan... 225 5e-57 gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis] >gnl|BL_O... 225 5e-57 gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus] 225 5e-57 gi|14249144|ref|NP_116006.1| RAB11B, member RAS oncogene family ... 224 6e-57 gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon n... 224 7e-57 gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus] 224 8e-57 gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus] 224 8e-57 gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries] 224 8e-57 gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346... 224 9e-57 gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human R... 223 1e-56 gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene fami... 223 1e-56 gi|15233873|ref|NP_193578.1| AtRABA1e (Arabidopsis Rab GTPase ho... 223 1e-56 gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cry... 223 1e-56 gi|4758986|ref|NP_004209.1| RAB11B, member RAS oncogene family [... 223 1e-56 gi|466172|sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 >gnl|B... 223 1e-56 gi|116498990|gb|EAU81885.1| hypothetical protein CC1G_06096 [Cop... 223 1e-56 gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Sol... 223 1e-56 gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon n... 223 1e-56 gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [H... 223 1e-56 gi|131849|sp|P22129|RB11B_DISOM Ras-related protein Rab-11B (ORA... 223 1e-56 gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlam... 223 1e-56 gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens] 223 1e-56 gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150... 223 1e-56 gi|109105440|ref|XP_001118047.1| PREDICTED: similar to RAB1B, me... 223 1e-56 gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella... 223 1e-56 gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vini... 223 2e-56 gi|55742328|ref|NP_001007162.1| RAB1A, member RAS oncogene famil... 223 2e-56 gi|114577812|ref|XP_530454.2| PREDICTED: hypothetical protein [P... 223 2e-56 gi|15217622|ref|NP_171715.1| ATRAB1B (Arabidopsis thaliana respo... 223 2e-56 gi|60302752|ref|NP_001012569.1| RAB11B, member RAS oncogene fami... 223 2e-56 gi|114638536|ref|XP_001150399.1| PREDICTED: similar to RAB1B, me... 223 2e-56 gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [sy... 223 2e-56 gi|1053067|gb|AAA80680.1| small GTP-binding protein 222 2e-56 gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum an... 222 2e-56 gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [C... 222 2e-56 gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene famil... 222 2e-56 gi|149725600|ref|XP_001491236.1| PREDICTED: hypothetical protein... 222 2e-56 gi|1053063|gb|AAA80678.1| small GTP-binding protein 222 2e-56 gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlam... 222 2e-56 gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa (jap... 222 2e-56 gi|131785|sp|P22125|RAB1_DISOM Ras-related protein ORAB-1 >gnl|B... 222 3e-56 gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum] >g... 222 3e-56 gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, i... 222 3e-56 gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens] 222 3e-56 gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [sy... 221 4e-56 gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] 221 4e-56 gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene fami... 221 4e-56 gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa (jap... 221 5e-56 gi|4758988|ref|NP_004152.1| RAB1A, member RAS oncogene family [H... 221 5e-56 gi|148236881|ref|NP_001088852.1| hypothetical protein LOC496163 ... 221 5e-56 gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella] 221 5e-56 gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene fam... 221 5e-56 gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max] 221 6e-56 gi|72535190|ref|NP_001026957.1| RAB1B, member RAS oncogene famil... 221 6e-56 gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum] >g... 221 6e-56 gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza ... 221 6e-56 gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis] 221 7e-56 gi|52345666|ref|NP_001004880.1| MGC88884 protein [Xenopus tropic... 221 7e-56 gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus] 221 7e-56 gi|56205120|emb|CAI24449.1| RAB1, member RAS oncogene family [Mu... 221 8e-56 gi|149640905|ref|XP_001513393.1| PREDICTED: similar to RAB1A, me... 220 8e-56 gi|3024504|sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B >gnl... 220 9e-56 gi|50540176|ref|NP_001002555.1| hypothetical protein LOC436828 [... 220 9e-56 gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus] 220 1e-55 gi|115447653|ref|NP_001047606.1| Os02g0653800 [Oryza sativa (jap... 220 1e-55 gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae s... 220 1e-55 gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta v... 220 1e-55 gi|464524|sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A >gnl|... 220 2e-55 gi|55925277|ref|NP_001007360.1| RAB11a, member RAS oncogene fami... 220 2e-55 gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HO... 220 2e-55 gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis] 220 2e-55 gi|118087671|ref|XP_419342.2| PREDICTED: hypothetical protein [G... 220 2e-55 gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus] 219 2e-55 gi|91076508|ref|XP_973251.1| PREDICTED: similar to CG5771-PB, is... 219 2e-55 gi|206553|gb|AAA42006.1| ras protein 219 2e-55 gi|157344192|emb|CAO69125.1| unnamed protein product [Vitis vini... 219 2e-55 gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa (jap... 219 2e-55 gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis] 219 2e-55 gi|94733945|emb|CAK04342.1| novel protein (zgc:55760) [Danio rerio] 219 3e-55 gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon n... 219 3e-55 gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, put... 219 3e-55 gi|217841|dbj|BAA00832.1| small GTP-binding protein [Arabidopsis... 219 3e-55 gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus] 219 3e-55 gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum] >g... 218 3e-55 gi|109940137|sp|P25766|RGP1_ORYSJ Ras-related protein RGP1 (GTP-... 218 3e-55 gi|66513627|ref|XP_623997.1| PREDICTED: similar to Rab-protein 1... 218 4e-55 gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus] 218 4e-55 gi|41056251|ref|NP_956417.1| hypothetical protein LOC386994 [Dan... 218 4e-55 gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putativ... 218 4e-55 gi|2500076|sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT... 218 4e-55 gi|3024528|sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV >gnl... 218 4e-55 gi|125773595|ref|XP_001358056.1| GA17362-PA [Drosophila pseudoob... 218 4e-55 gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti] >gnl|BL_O... 218 5e-55 gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermedia... 218 5e-55 gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa] 218 5e-55 gi|450635|gb|AAA50159.1| GTP binding protein 218 5e-55 gi|1370164|emb|CAA98159.1| RAB1B [Lotus japonicus] 218 5e-55 gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase 218 5e-55 gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus] >gnl|BL... 218 5e-55 gi|109103158|ref|XP_001089840.1| PREDICTED: similar to RAB1, mem... 218 6e-55 gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus] 218 6e-55 gi|156551916|ref|XP_001607057.1| PREDICTED: similar to putative ... 218 6e-55 gi|3024501|sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C >gnl... 218 6e-55 gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase ho... 217 8e-55 gi|432607|gb|AAB28535.1| ras-related GTP binding protein possess... 217 8e-55 gi|24648682|ref|NP_732610.1| Rab-protein 1 CG3320-PA, isoform A ... 217 8e-55 gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa] 217 9e-55 gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum] >g... 217 1e-54 gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norv... 217 1e-54 gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabi... 216 1e-54 gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max] 216 1e-54 gi|401686|sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 >gnl|B... 216 1e-54 gi|157358689|emb|CAO66374.1| unnamed protein product [Vitis vini... 216 1e-54 gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis] 216 1e-54 gi|147834751|emb|CAN75016.1| hypothetical protein [Vitis vinifer... 216 2e-54 gi|15219955|ref|NP_173136.1| RAB11 (ARABIDOPSIS RAB GTPASE HOMOL... 216 2e-54 gi|147802502|emb|CAN73117.1| hypothetical protein [Vitis vinifera] 216 2e-54 gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypi... 216 2e-54 gi|226486|prf||1515250A rab1B protein 216 2e-54 gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca coagulata] 216 2e-54 gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus... 216 2e-54 gi|68402952|ref|XP_695291.1| PREDICTED: similar to Rab1-prov pro... 216 2e-54 gi|41055496|ref|NP_957436.1| hypothetical protein LOC394117 [Dan... 216 2e-54 gi|109511883|ref|XP_001061706.1| PREDICTED: similar to Ras-relat... 215 3e-54 gi|119479611|ref|XP_001259834.1| conserved hypothetical protein ... 215 3e-54 gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein... 215 3e-54 gi|17558550|ref|NP_503397.1| RAB family member (rab-1) [Caenorha... 215 3e-54 gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Pha... 215 3e-54 gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G P... 215 3e-54 gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 ... 215 3e-54 gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [A... 215 4e-54 gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus... 215 4e-54 gi|15218719|ref|NP_174177.1| AtRABA1i (Arabidopsis Rab GTPase ho... 215 5e-54 gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interact... 215 5e-54 gi|3024500|sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A >gnl... 215 5e-54 gi|115478587|ref|NP_001062887.1| Os09g0327100 [Oryza sativa (jap... 215 5e-54 gi|157354270|emb|CAO46871.1| unnamed protein product [Vitis vini... 215 5e-54 gi|17507543|ref|NP_490675.1| RAB family member (rab-11.1) [Caeno... 215 5e-54 gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassi... 215 5e-54 gi|121713178|ref|XP_001274200.1| dynein light intermediate chain... 215 5e-54 gi|67528150|ref|XP_661885.1| GTP-binding protein Ypt1 [Aspergill... 215 5e-54 gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (jap... 215 5e-54 gi|147844837|emb|CAN83336.1| hypothetical protein [Vitis vinifer... 214 6e-54 gi|157354705|emb|CAO48023.1| unnamed protein product [Vitis vini... 214 6e-54 gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa (jap... 214 6e-54 gi|115495993|ref|NP_001069701.1| RAB1B, member RAS oncogene fami... 214 6e-54 gi|15236555|ref|NP_193486.1| RAB1C; GTP binding [Arabidopsis tha... 214 6e-54 gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus] 214 7e-54 gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa] 214 7e-54 gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] 214 7e-54 gi|125552993|gb|EAY98702.1| hypothetical protein OsI_019935 [Ory... 214 7e-54 gi|91087113|ref|XP_975150.1| PREDICTED: similar to CG3320-PA, is... 214 7e-54 gi|157761211|ref|XP_001672948.1| Hypothetical protein CBG01077 [... 214 7e-54 gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a... 214 7e-54 gi|145229443|ref|XP_001389030.1| hypothetical protein An01g06060... 214 7e-54 gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus... 214 8e-54 gi|17137216|ref|NP_477170.1| Rab-protein 11 CG5771-PB, isoform B... 214 8e-54 gi|75077202|sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B >gn... 214 8e-54 gi|1381676|gb|AAB97114.1| small GTP-binding protein [Glycine max] 214 8e-54 gi|1053065|gb|AAA80679.1| small GTP-binding protein 214 9e-54 gi|154276982|ref|XP_001539336.1| GTP-binding protein ypt1 [Ajell... 214 9e-54 gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa (jap... 213 1e-53 gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio] 213 1e-53 gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 ... 213 1e-53 gi|147811153|emb|CAN70163.1| hypothetical protein [Vitis vinifer... 213 1e-53 gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa (jap... 213 1e-53 gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon n... 213 1e-53 gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative... 213 1e-53 gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bomb... 213 1e-53 gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana] 213 1e-53 gi|303748|dbj|BAA02115.1| GTP-binding protein [Pisum sativum] >g... 213 1e-53 gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus] 213 1e-53 gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Cocci... 213 1e-53 gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana] 213 1e-53 gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens] 213 1e-53 gi|147789804|emb|CAN62934.1| hypothetical protein [Vitis vinifer... 213 1e-53 gi|85109909|ref|XP_963146.1| GTP-BINDING PROTEIN YPT1 [Neurospor... 213 1e-53 gi|145242842|ref|XP_001393994.1| secretion related GTPase srgB-A... 213 1e-53 gi|146097038|ref|XP_001468017.1| dynein light intermediate chain... 213 1e-53 gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein ... 213 1e-53 gi|45191035|ref|NP_985289.1| AER434Cp [Ashbya gossypii ATCC 1089... 213 1e-53 gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa (jap... 213 2e-53 gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces po... 213 2e-53 gi|154318598|ref|XP_001558617.1| GTP-binding protein ypt1 [Botry... 213 2e-53 gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsu... 213 2e-53 gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza... 213 2e-53 gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza ... 213 2e-53 gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypi... 213 2e-53 gi|13569962|ref|NP_112243.1| RAB1B, member RAS oncogene family [... 213 2e-53 gi|56605816|ref|NP_001008371.1| similar to Ras-related protein R... 213 2e-53 gi|42543204|pdb|1OIW|A Chain A, X-Ray Structure Of The Small G P... 213 2e-53 gi|66556180|ref|XP_392967.2| PREDICTED: similar to Rab-protein 1... 213 2e-53 gi|15222396|ref|NP_172221.1| AtRABA2b (Arabidopsis Rab GTPase ho... 213 2e-53 gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum] >g... 212 3e-53 gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [P... 212 3e-53 gi|15234020|ref|NP_193615.1| AtRABA1d/AtRab11B/AthSGBP (Arabidop... 212 3e-53 gi|50285709|ref|XP_445283.1| unnamed protein product [Candida gl... 212 3e-53 gi|70990240|ref|XP_749969.1| Ras GTPase Rab11, putative [Aspergi... 212 3e-53 gi|118486589|gb|ABK95133.1| unknown [Populus trichocarpa] 212 3e-53 gi|156545982|ref|XP_001607208.1| PREDICTED: similar to rab1 [Nas... 212 4e-53 gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neo... 212 4e-53 gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula] 211 4e-53 gi|7533034|gb|AAF63333.1|AF244545_1 YptA [Aspergillus awamori] 211 4e-53 gi|131803|sp|P10536|RAB1B_RAT Ras-related protein Rab-1B >gnl|BL... 211 4e-53 gi|157338312|emb|CAO39356.1| unnamed protein product [Vitis vini... 211 4e-53 gi|15230422|ref|NP_187823.1| AtRABA4d (Arabidopsis Rab GTPase ho... 211 4e-53 gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum] 211 5e-53 gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon n... 211 5e-53 gi|50292391|ref|XP_448628.1| unnamed protein product [Candida gl... 211 5e-53 gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1... 211 5e-53 gi|3024503|sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C >gnl... 211 5e-53 gi|156063734|ref|XP_001597789.1| GTP-binding protein ypt1 [Scler... 211 5e-53 gi|3024505|sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D >gnl... 211 6e-53 gi|18422766|ref|NP_568678.1| AtRABD2b/AtRab1A (Arabidopsis Rab G... 211 6e-53 gi|21313162|ref|NP_083852.1| RAB1B, member RAS oncogene family [... 211 6e-53 gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans] 211 6e-53 gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster] 211 6e-53 gi|125605011|gb|EAZ44047.1| hypothetical protein OsJ_027530 [Ory... 211 6e-53 gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound ... 211 7e-53 gi|157745909|ref|XP_001668051.1| Hypothetical protein CBG03904 [... 211 7e-53 gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1, put... 211 8e-53 gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding prote... 211 8e-53 gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Pha... 210 8e-53 gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p1... 210 9e-53 gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa (jap... 210 1e-52 gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa (jap... 210 1e-52 gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aes... 210 1e-52 gi|83771518|dbj|BAE61650.1| unnamed protein product [Aspergillus... 210 1e-52 gi|15237828|ref|NP_200723.1| AtRABA2d (Arabidopsis Rab GTPase ho... 210 1e-52 gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassi... 210 1e-52 gi|15232477|ref|NP_188124.1| AtRABA1g (Arabidopsis Rab GTPase ho... 210 1e-52 gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japo... 210 1e-52 gi|125951003|ref|XP_001345672.1| PREDICTED: hypothetical protein... 210 1e-52 gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Asp... 210 1e-52 gi|66810383|ref|XP_638915.1| Rab GTPase [Dictyostelium discoideu... 210 1e-52 gi|122064946|sp|Q06AU7|RAB1B_PIG Ras-related protein Rab-1B >gnl... 210 2e-52 gi|466171|sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 >gnl|BL_... 210 2e-52 gi|147777473|emb|CAN62732.1| hypothetical protein [Vitis vinifer... 210 2e-52 gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus] 210 2e-52 gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa (jap... 210 2e-52 gi|3024529|sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E >gnl... 210 2e-52 gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum] >g... 209 2e-52 gi|39978155|ref|XP_370465.1| secretion related GTPase [Magnaport... 209 2e-52 gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococ... 209 2e-52 gi|85082713|ref|XP_956972.1| hypothetical protein ( (NM_017382) ... 209 2e-52 gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa] 209 2e-52 gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein... 209 3e-52 gi|6320869|ref|NP_010948.1| GTPase of the Ypt/Rab family, very s... 209 3e-52 gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Crypto... 209 3e-52 gi|267527|sp|Q01111|YPT3_NICPL Ras-related protein YPT3 >gnl|BL_... 209 3e-52 gi|15238392|ref|NP_201330.1| AtRABA4a (Arabidopsis Rab GTPase ho... 209 3e-52 gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gib... 209 3e-52 gi|6321228|ref|NP_011305.1| GTPase of the Ypt/Rab family, very s... 209 3e-52 gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum] >g... 209 3e-52 gi|157327287|emb|CAO15080.1| unnamed protein product [Vitis vini... 209 3e-52 gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabido... 209 3e-52 gi|66816599|ref|XP_642309.1| Rab GTPase [Dictyostelium discoideu... 208 3e-52 gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis] 208 3e-52 gi|126338784|ref|XP_001365286.1| PREDICTED: hypothetical protein... 208 4e-52 gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaet... 208 4e-52 gi|147788245|emb|CAN75965.1| hypothetical protein [Vitis vinifera] 208 4e-52 gi|15242483|ref|NP_199387.1| AtRABA1c (Arabidopsis Rab GTPase ho... 208 4e-52 gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekine... 208 4e-52 gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis] 208 4e-52 gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab1... 208 4e-52 gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster] 208 4e-52 gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum] 208 5e-52 gi|15238115|ref|NP_199563.1| AtRABA5a (Arabidopsis Rab GTPase ho... 208 5e-52 gi|15229836|ref|NP_187779.1| ATFP8 (Arabidopsis Rab GTPase homol... 208 5e-52 gi|15232652|ref|NP_190267.1| AtRABA2c/AtRab11A (Arabidopsis Rab ... 208 5e-52 gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270... 208 5e-52 gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon n... 208 6e-52 gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis] 208 6e-52 gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus] 208 7e-52 gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_002... 207 7e-52 gi|114576516|ref|XP_001149988.1| PREDICTED: similar to Rab10 iso... 207 7e-52 gi|3024502|sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D >gnl... 207 7e-52 gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana] 207 7e-52 gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In C... 207 7e-52 gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneif... 207 8e-52 gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malas... 207 9e-52 gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa (jap... 207 9e-52 gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa (jap... 207 1e-51 gi|15238852|ref|NP_199607.1| SMG1 (SMALL MOLECULAR WEIGHT G-PROT... 207 1e-51 gi|115398722|ref|XP_001214950.1| conserved hypothetical protein ... 207 1e-51 gi|72180728|ref|XP_798729.1| PREDICTED: similar to Rab11b [Stron... 207 1e-51 gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa (jap... 207 1e-51 gi|1370196|emb|CAA98175.1| RAB8D [Lotus japonicus] 207 1e-51 gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lema... 207 1e-51 gi|414832|gb|AAA34003.1| Rab7p 206 1e-51 gi|15226182|ref|NP_180943.1| ArRABA1h (Arabidopsis Rab GTPase ho... 206 1e-51 gi|158292354|ref|XP_313857.2| AGAP004559-PD [Anopheles gambiae s... 206 1e-51 gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Pichia... 206 1e-51 gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago ... 206 1e-51 gi|92893897|gb|ABE91947.1| Ras small GTPase, Rab type [Medicago ... 206 2e-51 gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Hypo... 206 2e-51 gi|1448941|gb|AAB04618.1| ypt-related protein 206 2e-51 gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japo... 206 2e-51 gi|148237538|ref|NP_001083031.1| hypothetical protein LOC1000387... 206 2e-51 gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii] 206 2e-51 gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptospor... 206 2e-51 gi|145610591|ref|XP_368165.2| hypothetical protein MGG_01079 [Ma... 206 3e-51 gi|15236099|ref|NP_195709.1| ATGB3 (GTP-BINDING PROTEIN 3); GTP ... 206 3e-51 gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula] 206 3e-51 gi|126277017|ref|XP_001366139.1| PREDICTED: similar to RAB-8b pr... 205 3e-51 gi|125546399|gb|EAY92538.1| hypothetical protein OsI_013771 [Ory... 205 3e-51 gi|149773480|ref|NP_001092729.1| hypothetical protein LOC1000937... 205 3e-51 gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyce... 205 3e-51 gi|119578676|gb|EAW58272.1| hCG2011109 [Homo sapiens] 205 3e-51 gi|50412303|ref|XP_457123.1| hypothetical protein DEHA0B03608g [... 205 3e-51 gi|71410660|ref|XP_807614.1| small GTP-binding protein Rab1 [Try... 205 3e-51 gi|157874331|ref|XP_001685649.1| dynein light intermediate chain... 205 4e-51 gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, put... 205 4e-51 gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thali... 205 4e-51 gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10... 205 4e-51 gi|15221477|ref|NP_172128.1| ARA2 (Arabidopsis Rab GTPase homolo... 205 4e-51 gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa] 205 5e-51 gi|75070935|sp|Q5REC9|RAB8B_PONPY Ras-related protein Rab-8B >gn... 205 5e-51 gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max] 205 5e-51 gi|17737369|ref|NP_523419.1| Rab-protein 10 CG17060-PA [Drosophi... 205 6e-51 gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis ... 204 6e-51 gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum] 204 7e-51 gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene fami... 204 7e-51 gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-li... 204 7e-51 gi|156538473|ref|XP_001606644.1| PREDICTED: similar to ras-relat... 204 8e-51 gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, puta... 204 8e-51 gi|23463313|ref|NP_695229.1| RAB8B, member RAS oncogene family [... 204 8e-51 gi|7706563|ref|NP_057614.1| RAB8B, member RAS oncogene family [H... 204 9e-51 gi|125559285|gb|EAZ04821.1| hypothetical protein OsI_026053 [Ory... 204 9e-51 gi|125546252|gb|EAY92391.1| hypothetical protein OsI_013624 [Ory... 204 1e-50 gi|91083485|ref|XP_971858.1| PREDICTED: similar to CG8287-PA [Tr... 203 1e-50 gi|131848|sp|P22128|RAB8_DISOM Ras-related protein Rab-8 (ORA2) ... 203 1e-50 gi|30585389|gb|AAP36967.1| Homo sapiens mel transforming oncogen... 203 1e-50 gi|66518279|ref|XP_393723.2| PREDICTED: similar to Rab-protein 1... 203 1e-50 gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces po... 203 1e-50 gi|126138088|ref|XP_001385567.1| predicted protein [Pichia stipi... 203 1e-50 gi|16933567|ref|NP_005361.2| mel transforming oncogene [Homo sap... 203 2e-50 gi|74152890|dbj|BAE27741.1| unnamed protein product [Mus musculus] 203 2e-50 gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa (jap... 203 2e-50 gi|157428086|ref|NP_001098951.1| RAB8A, member RAS oncogene fami... 203 2e-50 gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japo... 203 2e-50 gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norv... 203 2e-50 gi|140832723|gb|AAI35799.1| Rab8b protein [Xenopus tropicalis] 203 2e-50 gi|147783308|emb|CAN64127.1| hypothetical protein [Vitis vinifera] 203 2e-50 gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotian... 203 2e-50 gi|157337366|emb|CAO21712.1| unnamed protein product [Vitis vini... 203 2e-50 gi|157347471|emb|CAO18108.1| unnamed protein product [Vitis vini... 203 2e-50 gi|75070428|sp|Q5R4A3|RAB8A_PONPY Ras-related protein Rab-8A >gn... 203 2e-50 gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis] 203 2e-50 gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon n... 202 2e-50 gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum] 202 3e-50 gi|156551213|ref|XP_001600682.1| PREDICTED: similar to ras-relat... 202 3e-50 gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus] 202 3e-50 gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspe... 202 3e-50 gi|50752811|ref|XP_413757.1| PREDICTED: similar to GTPase Rab8b ... 202 3e-50 gi|50292669|ref|XP_448767.1| unnamed protein product [Candida gl... 202 3e-50 gi|125562255|gb|EAZ07703.1| hypothetical protein OsI_028935 [Ory... 202 3e-50 gi|38372905|ref|NP_075615.2| cell line NK14 derived transforming... 202 3e-50 gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lema... 202 3e-50 gi|157344312|emb|CAO69245.1| unnamed protein product [Vitis vini... 202 3e-50 gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Asper... 202 3e-50 gi|156847653|ref|XP_001646710.1| hypothetical protein Kpol_1023p... 202 4e-50 gi|68491615|ref|XP_710395.1| putative rab family GTP-binding pro... 202 4e-50 gi|49522647|gb|AAH71176.1| Rab8a protein [Rattus norvegicus] 202 4e-50 gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa] 201 4e-50 gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis] 201 4e-50 gi|3024527|sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV >gnl... 201 4e-50 gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodde... 201 4e-50 gi|46326983|gb|AAS88430.1| ethylene-responsive small GTP-binding... 201 4e-50 gi|1370198|emb|CAA98176.1| RAB8E [Lotus japonicus] 201 4e-50 gi|115496115|ref|NP_001069785.1| RAB8B, member RAS oncogene fami... 201 4e-50 gi|15231322|ref|NP_190192.1| ARA3; GTP binding [Arabidopsis thal... 201 5e-50 gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene fami... 201 5e-50 gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus] 201 5e-50 gi|125604071|gb|EAZ43396.1| hypothetical protein OsJ_026879 [Ory... 201 5e-50 gi|157349142|emb|CAO24288.1| unnamed protein product [Vitis vini... 201 5e-50 gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa (jap... 201 5e-50 gi|157343673|emb|CAO68179.1| unnamed protein product [Vitis vini... 201 5e-50 gi|125821495|ref|XP_001334371.1| PREDICTED: similar to GTPase Ra... 201 5e-50 gi|158591297|gb|EDP29910.1| Ras-related protein Rab-10, putative... 201 6e-50 Sequences not found previously or not previously below threshold: gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, puta... 201 6e-50 >gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light intermediate chain isoform 1 [Pan troglodytes] Length = 351 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 211/355 (59%), Positives = 264/355 (74%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT+D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PDRELI P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +S K++KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 296 LFPPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain isoform 1 variant [Homo sapiens] Length = 351 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 209/355 (58%), Positives = 261/355 (73%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD ELI P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKLRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 296 LFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 350 >gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 2 [Canis familiaris] Length = 348 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 213/355 (60%), Positives = 264/355 (74%), Gaps = 11/355 (3%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R S D E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGSEGDGLE--------IGEKSVFFIGSKNGGKTTIILRCLDRDE 53 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHN PKDIAH WELGGG SL DL+ IPIT+DN+ S+VLVLD Sbjct: 54 PPKPTLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTFSIVLVLD 113 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+K+ L KT +Q++ + KD+PDREL+ P Sbjct: 114 LSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDP 173 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 F +PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 174 FLIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKVRGVIN 232 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DSLSQIG P + DIG LHA +P DLWKKV+E+ Sbjct: 233 QLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYER 292 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 VFP +ST K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 293 VFPPKSTNTLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWKQIELD 347 >gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|20988526|gb|AAH30450.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|24659541|gb|AAH39070.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 351 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 209/355 (58%), Positives = 263/355 (74%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R S E + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRRSHGSEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 +AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 SAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT +QR+ V+ KD+PDRELI P Sbjct: 117 LSKPNDLWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P +LWKKV++K Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +ST K ++DP +DPQ++E +D +R QKDQEL+ YKR +K+WK + LD Sbjct: 296 LFPPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWKQIELD 350 >gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain isoform 1 [Homo sapiens] gi|19908231|gb|AAL99216.1| dynein 2 light intermediate chain [Homo sapiens] gi|119620696|gb|EAX00291.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_c [Homo sapiens] Length = 351 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 209/355 (58%), Positives = 260/355 (73%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD ELI P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 296 LFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 350 >gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein [Equus caballus] Length = 351 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 210/355 (59%), Positives = 265/355 (74%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 SDTLW+IA AEV R S E + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSDTLWEIAKAEVEKRGSNGSESDGVE-----IGEKSVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GR+A+GHN PKDIAH WELGGG SL DL+ IPIT+D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRKAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V KV L K +Q++ + KD+PDRE+I P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVNKVIMKLGKKNSKASSEMRQKIWSNMQKDHPDREIIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FP+PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DSLSQIG P + DIG LHA++P +LWKKV+E+ Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMELWKKVYER 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP ++T K++KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 296 LFPPKNTNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] gi|81673547|gb|AAI09911.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] Length = 351 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 212/355 (59%), Positives = 264/355 (74%), Gaps = 8/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R S +E + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGSSENEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRR +GHN PKDIAH WELGGG SL DL+ IPIT+D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + + ++KV L K +Q++ + KD+PDREL+ P Sbjct: 117 LSKPNDLWPTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKDHPDRELLDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FP+PL+I+GSK+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG + KSI D +KPL I AG DSLSQIGPP + DIG LHA++P DLWKKV+EK Sbjct: 236 QLAFGINKSKSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDLWKKVYEK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +S K++KDP KDPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 296 LFPPKSINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 350 >gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] Length = 350 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 208/355 (58%), Positives = 259/355 (72%), Gaps = 9/355 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT +Q++ +D+PD ELI P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIW-NYAEDHPDHELIDP 175 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 176 FPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 234 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK Sbjct: 235 QLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEK 294 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 +FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 295 LFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 349 >gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|62822153|gb|AAY14702.1| unknown [Homo sapiens] gi|119620694|gb|EAX00289.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 352 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 209/356 (58%), Positives = 260/356 (73%), Gaps = 9/356 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYP-DRELIS 181 LSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+P D ELI Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPQDHELID 176 Query: 182 PFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFI 241 PFPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R I Sbjct: 177 PFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVI 235 Query: 242 NQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFE 301 NQLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+E Sbjct: 236 NQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYE 295 Query: 302 KVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 K+FP +S K++KDP +DPQ++E +D +R QKD EL+QYKR +KSWK + LD Sbjct: 296 KLFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWKQIELD 351 >gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 387 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 212/354 (59%), Positives = 265/354 (74%), Gaps = 8/354 (2%) Query: 6 SDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET 65 SDTLW+IA AEV RE + + E +++VFF+GSK GGKTTI+LR L+RDE Sbjct: 39 SDTLWEIAKAEVEKREISENGGDGAE-----VCEKSVFFIGSKNGGKTTIILRCLDRDEP 93 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT +++ S+VLVLDL Sbjct: 94 PKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITNESLRTFSLVLVLDL 153 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPF 183 SKPN LW TMESLL + V+K+ L KT +Q++ + KD+PDRELI PF Sbjct: 154 SKPNDLWPTMESLLQVTKAHVDKLIMKLGKTSTKAASEMRQKMWSNMQKDHPDRELIDPF 213 Query: 184 PVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQ 243 P+PL+I+GSK+DIFQDFDSEKRK+ICKTLRF++H+YGASL+F S KSE + K R INQ Sbjct: 214 PIPLVIIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMFAS-KSEALLLKIRGVINQ 272 Query: 244 LAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKV 303 LAFG ++ KSIS D +KPL IPAG DSLSQIG P +E +IG LHA+ P +LWKKV+EKV Sbjct: 273 LAFGIDKSKSISVDQNKPLFIPAGLDSLSQIGSPPLSENEIGKLHAQTPMELWKKVYEKV 332 Query: 304 FPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP +S KE +DP +DPQ++E +D +RAQKDQEL+QYK+ +KSWK + D Sbjct: 333 FPPKSANTSKETRDPARDPQYAESEVDEMRAQKDQELEQYKKNTSKSWKQIEFD 386 >gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Danio rerio] gi|32766386|gb|AAH55198.1| Zgc:63673 [Danio rerio] Length = 358 Score = 365 bits (937), Expect = 3e-99, Method: Composition-based stats. Identities = 358/358 (100%), Positives = 358/358 (100%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL Sbjct: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV Sbjct: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI Sbjct: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF Sbjct: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF Sbjct: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 Query: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP Sbjct: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 >gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 light intermediate chain [Gallus gallus] Length = 637 Score = 362 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 204/360 (56%), Positives = 263/360 (73%), Gaps = 9/360 (2%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPK + DTLWDIA EV RE+ D+ + E +++V FMGSK GGKTTI+LR L Sbjct: 284 MPK-AGDTLWDIARDEVEKRENNGDDGKRVE-----VCEKSVLFMGSKNGGKTTIILRCL 337 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 ER+E KPTL LEYTFGRRAR HN PKDIAH WE+GGG SL +L++IPIT +N+ +VV Sbjct: 338 EREEVPKPTLVLEYTFGRRARRHNAPKDIAHFWEIGGGTSLLELIRIPITVNNIRSFAVV 397 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES--RSGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + RN V K+ A L+KT KQ++ L +D+PD + Sbjct: 398 LVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKTDPEVAAEIKQKMQNNLQRDHPDYD 457 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 L+ PFP+PL+I+GSK+DIF +FDSE RK+I +TLRF++H+YGASL+FTS KSE + K+R Sbjct: 458 LVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRFVSHYYGASLVFTS-KSEALLLKAR 516 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 + IN LAFG +R KS+S D SKPL IPAG DSLSQIGPP ++ +IG + A P +LWKK Sbjct: 517 ALINHLAFGYDRSKSVSVDHSKPLFIPAGLDSLSQIGPPPTSDSNIGKMRANTPLELWKK 576 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP 358 VFEK FP S + ++ KDP + Q++E +D +RAQK+QE +QYKR +KSWK + DP Sbjct: 577 VFEKTFPPRSFSDLQDSKDPAQVSQYAEYEVDVMRAQKNQEFEQYKRNASKSWKEMDFDP 636 >gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 [Macaca mulatta] Length = 365 Score = 358 bits (919), Expect = 3e-97, Method: Composition-based stats. Identities = 199/359 (55%), Positives = 254/359 (70%), Gaps = 8/359 (2%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 +P+ +TLW+IA AEV R E + E +++VFF+GSK GGKTTI+LR L Sbjct: 12 VPQKIIETLWEIAKAEVEKRGINGSEGDGAE-----IGEKSVFFIGSKNGGKTTIILRCL 66 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RD K L L ++F G +TPKDIAH WELGGG SL DL+ +PIT+D + S+V Sbjct: 67 DRDRPPKMVLFLFFSFSFCHPGWSTPKDIAHFWELGGGTSLLDLISVPITSDTLRTFSLV 126 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+K+ L KT +Q++ + KD+PDRE Sbjct: 127 LVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNPKAASEMRQKIWNNMQKDHPDRE 186 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFPVPL+I+GSK+DIFQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 187 LIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIR 245 Query: 239 SFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 INQLAFG ++ KSI D +KPL I AG DS SQIG P E DIG LHA +P +LWKK Sbjct: 246 GVINQLAFGIDKSKSICVDQNKPLLITAGLDSFSQIGSPPVPENDIGKLHAHSPMELWKK 305 Query: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 V+EK+FP +S K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 306 VYEKLFPPKSINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWKQIELD 364 >gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermediate chain isoform 2 [Pan troglodytes] Length = 334 Score = 357 bits (916), Expect = 7e-97, Method: Composition-based stats. Identities = 200/338 (59%), Positives = 250/338 (73%), Gaps = 8/338 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E ++++VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKSVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT+D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PDRELI P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQEL 340 +FP +S K++KDP +DPQ++E +D +R QKDQ L Sbjct: 296 LFPPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQVL 333 >gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chain isoform 3 [Homo sapiens] Length = 334 Score = 352 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 197/335 (58%), Positives = 245/335 (73%), Gaps = 8/335 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV R E + E +++ VFF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAE-----IAEKFVFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 KPTLALEYT+GRRA+GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISP 182 LSKPN LW TME+LL + ++ V+KV L KT +Q++ + KD+PD ELI P Sbjct: 117 LSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FPVPL+I+GSK+D+FQDF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKD 337 +FP +S K++KDP +DPQ++E +D +R QKD Sbjct: 296 LFPPKSINTLKDIKDPARDPQYAENEVDEMRIQKD 330 >gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] Length = 341 Score = 344 bits (884), Expect = 4e-93, Method: Composition-based stats. Identities = 193/331 (58%), Positives = 245/331 (74%), Gaps = 8/331 (2%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 S+TLW+IA AEV+ R S E + E ++++FF+GSK GGKTTI+LR L+RDE Sbjct: 2 PSETLWEIAKAEVQKRRSHGSEGDGAE-----IGEKSLFFIGSKNGGKTTIILRCLDRDE 56 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 +AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLD Sbjct: 57 SAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLD 116 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGES--RSGKQRVPRVLHKDYPDRELISP 182 LSKPN W TME+LL + ++ V+KV L KT +QR+ V+ KD+PDRELI P Sbjct: 117 LSKPNDHWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDP 176 Query: 183 FPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFIN 242 FP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FTS KSE + K R IN Sbjct: 177 FPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVIN 235 Query: 243 QLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEK 302 QLAFG ++ KSI D +KPL I AG DSL QIG P + DIG L A +P +LWKKV++K Sbjct: 236 QLAFGIDKSKSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDK 295 Query: 303 VFPHESTRERKELKDPVKDPQFSEPLIDSIR 333 +FP +ST K ++DP +DPQ++E +D +R Sbjct: 296 LFPPKSTGTLKAVQDPARDPQYAESEVDEMR 326 >gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] Length = 318 Score = 334 bits (857), Expect = 6e-90, Method: Composition-based stats. Identities = 187/319 (58%), Positives = 234/319 (73%), Gaps = 8/319 (2%) Query: 21 ESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRA 80 E + E ++++VFF+GSK GGKTTI+LR L+RDE KPTLALEYT+GRRA Sbjct: 2 GINGSEGDGAE-----FAEKSVFFIGSKNGGKTTIILRCLDRDEPPKPTLALEYTYGRRA 56 Query: 81 RGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLG 140 +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+VLVLDLSKPN LW TME+LL Sbjct: 57 KGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQ 116 Query: 141 SARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQ 198 + ++ V+KV L KT +Q++ + KD+PD ELI PFPVPL+I+GSK+D+FQ Sbjct: 117 ATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQ 176 Query: 199 DFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDP 258 DF+SEKRKVICKTLRF+AH+YGASL+FTS KSE + K R INQLAFG ++ KSI D Sbjct: 177 DFESEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKLRGVINQLAFGIDKSKSICVDQ 235 Query: 259 SKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDP 318 +KPL I AG DS QIG P E DIG LHA +P +LWKKV+EK+FP +S K++KDP Sbjct: 236 NKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDP 295 Query: 319 VKDPQFSEPLIDSIRAQKD 337 +DPQ++E +D +R QKD Sbjct: 296 ARDPQYAENEVDEMRIQKD 314 >gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115941395|ref|XP_001177851.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 363 Score = 327 bits (839), Expect = 7e-88, Method: Composition-based stats. Identities = 162/356 (45%), Positives = 244/356 (68%), Gaps = 7/356 (1%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 M ++WDIA E + + +E+ E S+ + F+GSK GKT+I+LRFL Sbjct: 1 MFANKEKSIWDIAILEAEQKHATESKEQGGEAKG---SENHILFIGSKNAGKTSIILRFL 57 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 E++E KPT+ALEYTFGRRA+GHN KDI H+WELGGG LS L +IP++ D + S++ Sbjct: 58 EKEEAPKPTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLM 117 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAAL--QKTGESRSGKQRVPRVLHKDYPDRE 178 +V+DLS+P LW TME+L+ A + VE+V + K+R + + D+PDR+ Sbjct: 118 VVMDLSQPYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHPDRD 177 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 ++ PFP+PL+IVG+K+D++QDFD EKRKVI KTLRF+AH YGA+L F+S+K++ MS+++ Sbjct: 178 MLDPFPLPLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTK 237 Query: 239 SFINQLAFGTE-RPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 + ++ LAFGT K+IS DP+KP+++P G DSL QIG P + D+G +A+ P DLWK Sbjct: 238 NLVSHLAFGTTLSLKTISIDPNKPISVPFGLDSLEQIGLPPVADDDLGRSNARTPLDLWK 297 Query: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKS 353 + F FP +ST + ++DP KDPQ++E +D++R QK++EL++Y+++ + K Sbjct: 298 QAFTSYFPQKSTIKA-IVEDPSKDPQYAEAAVDNMREQKNKELERYRKQAERRAKE 352 >gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein light intermediate chain 2 [Monodelphis domestica] Length = 493 Score = 321 bits (824), Expect = 4e-86, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 126/363 (34%), Gaps = 48/363 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + + G GKTT+L + + Sbjct: 28 EEDEGQNLWSSILSEVSTR-----------SRSKLPSGKNILVFGEDGSGKTTLLAKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E +K LEY + ++W L G + L++ ++A+ + V+ Sbjct: 76 GAEHSKKGRGLEYLYLNIHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAETLQETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V D+S+P + E+++ R ++K+ ++ + + + + Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRDMEQKFVKDFQEYVEPEEGYQGSP 195 Query: 173 -----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLASAQDGENVILPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHVRKFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ +P+ D K + H+ ++ + + Q Sbjct: 316 NEKKIAI---LHENFTTVKPDDPYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQQSFLAK 372 Query: 329 IDS 331 + Sbjct: 373 QPA 375 >gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella vectensis] gi|156226126|gb|EDO46938.1| predicted protein [Nematostella vectensis] Length = 366 Score = 319 bits (818), Expect = 2e-85, Method: Composition-based stats. Identities = 161/357 (45%), Positives = 227/357 (63%), Gaps = 3/357 (0%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 K S T+WD+A E + ++ +E H + +F +GSK GKT+++LRFL+R Sbjct: 4 KRSDKTIWDLAIEERDYLLNEAKKKGTQESSPHGE-EAGIFLIGSKNAGKTSMVLRFLDR 62 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 DE KPT AL+YTFGR+A+GHN KD+ H+WELGGG LS L+ IPI D+V LS+++ Sbjct: 63 DEVPKPTTALDYTFGRKAKGHNIAKDVGHIWELGGGTFLSKLIDIPINVDSVRGLSIIIF 122 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQR--VPRVLHKDYPDRELI 180 LDLS PN LW TME+LL + +V KV L S K R D+PD+ + Sbjct: 123 LDLSLPNELWHTMETLLNQVKKRVHKVMDELAAKNPSAVQKLRNDAWEKFGTDHPDKSFV 182 Query: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 PFP+PL IVG K+DI+QDFD EKRK+I + LRF+AH GA L F S+K+E + +SR Sbjct: 183 EPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGRSRGM 242 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 I L F T K+I D +KP+ + AG DSL+QIG P D+G L ++NP+DLWK + Sbjct: 243 IGHLLFHTSLGKAIGVDHNKPIIVSAGQDSLAQIGAPPVASEDLGRLQSRNPYDLWKAAY 302 Query: 301 EKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 FP E +++ + +DP KDPQ+ E +D++R QKD+ELD+Y+R+ + + ++ D Sbjct: 303 ATFFPPEKSKQHSDREDPSKDPQYFEAAVDAMRKQKDEELDRYRRQAERKAREMSRD 359 >gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|73919260|sp|Q8R1Q8|DC1L1_MOUSE Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|19484061|gb|AAH23347.1| Dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|74198263|dbj|BAE35301.1| unnamed protein product [Mus musculus] gi|148677352|gb|EDL09299.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] Length = 523 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 131/365 (35%), Gaps = 55/365 (15%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPTGKNVLLLGEDGAGKTSLIRR-IQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ E R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRTTGAQEDRGDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL ++ F D+ K + F HE +D Q + Sbjct: 330 DKKIGI---LHENFQTLKVEDNFEDIITKPPVRKFVHEKEI-------MAEDDQVFLMKL 379 Query: 330 DSIRA 334 S+ A Sbjct: 380 QSLLA 384 >gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_a [Mus musculus] Length = 527 Score = 317 bits (814), Expect = 6e-85, Method: Composition-based stats. Identities = 71/366 (19%), Positives = 128/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 63 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 110 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 111 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 170 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG--------------ESRSGKQRVP 167 V D+S+P + E+++ R ++K+ ++ E G Q P Sbjct: 171 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 230 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 231 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 290 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 291 AHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 350 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 351 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 400 Query: 329 IDSIRA 334 S+ A Sbjct: 401 QQSLLA 406 >gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 131/365 (35%), Gaps = 55/365 (15%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPTGKNVLLLGEDGAGKTSLIRR-IQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ E R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL ++ F D+ K + F HE +D Q + Sbjct: 330 DKKIGI---LHENFQTLKIEDNFEDIITKPPVRKFVHEKEI-------MAEDDQVFLMKL 379 Query: 330 DSIRA 334 S+ A Sbjct: 380 QSLLA 384 >gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 125/365 (34%), Gaps = 54/365 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V G GKTT++ + + Sbjct: 24 EDDEGQNLWSSILSEVSTR-----------SSSKLPSGKNVLLFGEDGSGKTTLMSKL-Q 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------ 175 V+D+S+P + E+++ R V+K+ ++ E + + + Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 176 -------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVFIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + T+ ++PF D K + H+ +D Q Sbjct: 312 DKKIGI---LHENFTTVRPEDPFEDFITKPPVRKLVHDKEIS-------AEDEQVFLMKQ 361 Query: 330 DSIRA 334 S+ A Sbjct: 362 QSLLA 366 >gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A isoform 2 [Pan troglodytes] gi|134047749|sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|119584837|gb|EAW64433.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_c [Homo sapiens] gi|124297735|gb|AAI31621.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] Length = 523 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 132/365 (36%), Gaps = 55/365 (15%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ + R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL A++ F D+ K + F HE +D Q + Sbjct: 330 DKKIGI---LHENFQTLKAEDNFEDIITKPPVRKFVHEKEI-------MAEDDQVFLMKL 379 Query: 330 DSIRA 334 S+ A Sbjct: 380 QSLLA 384 >gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [Danio rerio] Length = 500 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 70/365 (19%), Positives = 124/365 (33%), Gaps = 54/365 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V G GKTT++ + + Sbjct: 24 EDDEGQNLWSSILSEVSTR-----------SSSKLPSGKNVLLFGEDGSGKTTLMSKL-Q 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------ 175 V+D+S+P + E+++ R V+K+ ++ E + + + Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 176 -------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVFIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +I + T+ ++PF D K + H+ +D Q Sbjct: 312 DKKI---CILHENFTTVRPEDPFEDFITKPPVRKLVHDKEIS-------AEDEQVFLMKQ 361 Query: 330 DSIRA 334 S+ A Sbjct: 362 QSLLA 366 >gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin light chain A [Monodelphis domestica] Length = 520 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 74/360 (20%), Positives = 130/360 (36%), Gaps = 46/360 (12%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V +G GKT+++ R Sbjct: 36 EEDDGQNLWSCILSEVSTR-----------SRSKLPSGKNVLLLGEDGAGKTSLIGRIQG 84 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 R E K EY + + ++W L G + L++ + A+++ V+L Sbjct: 85 RPEECKKGRGAEYLYLSVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMEANSLRDTLVIL 144 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD----- 176 V+D+SKP ++++ R ++K+ ++ E R + + D Sbjct: 145 VVDMSKPWTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASP 204 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L VP+L+V +K D D+ E I Sbjct: 205 QRRSTLQEDKDDSVMLPLGADTLTYNLGVPVLVVCTKCDAISVLEKEHDYKDEHFDFIQS 264 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 265 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFKIPAVVVEKDAVFIPAGWDN 324 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL A++ F D+ K + F HE ++ + + Q Sbjct: 325 DKKIGI---LHENFQTLKAEDSFEDIITKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 381 >gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 132/365 (36%), Gaps = 55/365 (15%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ + R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL A++ F D+ K + F HE +D Q + Sbjct: 330 DKKIGI---LHENFQTLKAEDNFEDIITKPPVRKFVHEKEI-------MAEDDQVFLMKL 379 Query: 330 DSIRA 334 S+ A Sbjct: 380 QSLLA 384 >gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 213/364 (58%), Positives = 258/364 (70%), Gaps = 13/364 (3%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MPK+SSDTLWD+AAAEV SRES D E + +RTVF MGSKAGGKT+ILL+ L Sbjct: 1 MPKISSDTLWDLAAAEVNSRESEDDYGER-----NVAVERTVFLMGSKAGGKTSILLKCL 55 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE +KPTLALEYTFGRRARGHNTPKDIAH+WELGGG LSDLVQIPIT+ ++ FLSV+ Sbjct: 56 DRDEPSKPTLALEYTFGRRARGHNTPKDIAHIWELGGGTFLSDLVQIPITSADLKFLSVI 115 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR------SGKQRVPRVLHKDY 174 L++DLSKPN LW T E LL + +EK + QK ++ + Q RVL DY Sbjct: 116 LIVDLSKPNELWGTTEKLLQVTQAHLEKAFSMAQKAQTAKPAATHQTATQSAARVLPADY 175 Query: 175 PDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLI-FTSSKSETT 233 PDRELIS FPVPLLIVGSK+DIFQ+FDS+K+K+I + LRF+AH Y ASLI Sbjct: 176 PDRELISAFPVPLLIVGSKYDIFQEFDSDKKKLIAQMLRFVAHSYAASLIVIHQXXXXXX 235 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 K++S D +KPL IPAGSDS SQIG P A +VDI +LHA+NP Sbjct: 236 XXXXXXXXXXXXXXXXXXKTVSMDLTKPLIIPAGSDSFSQIGSPCAADVDIASLHARNPK 295 Query: 294 DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKS 353 DLW+KV VFP E + ++LKDP KDPQ+SEP ID++RAQKDQEL+QYKR AK+W+ Sbjct: 296 DLWRKVCGCVFPPEKEHQ-QDLKDPAKDPQYSEPQIDAMRAQKDQELEQYKRNAAKTWQG 354 Query: 354 LALD 357 L L+ Sbjct: 355 LDLE 358 >gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] gi|62531080|gb|AAH93336.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 125/365 (34%), Gaps = 54/365 (14%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V G GKTT++ + + Sbjct: 24 EDDEGQNLWSSILSEVSTR-----------SSSKLPSGKNVLLFGEDGSGKTTLMSKL-Q 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + +W L G + L++ +TA+++ V Sbjct: 72 GAEHNKKGRGLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP------ 175 V+D+S+P + E+++ R V+K+ ++ E + + + Sbjct: 132 VVDMSRPWTIMESLQKWTSVLREHVDKLRIPPEEMREMEQRMVKAFQEYVEPEEATPGSP 191 Query: 176 -------------------DRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 D L +P+LIV +K D D+ E I Sbjct: 192 QRRAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA LI+TS K E + ++ + + + IP+G D+ Sbjct: 252 HIRRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSSPALVVEKDAVLIPSGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + T+ ++PF D K + H+ +D Q Sbjct: 312 DKKIGI---LHENFTTVRPEDPFEDFITKPPVRKLVHDKEIS-------AEDEQVFLMKQ 361 Query: 330 DSIRA 334 S+ A Sbjct: 362 QSLLA 366 >gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light chain-A [Canis familiaris] Length = 524 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 132/365 (36%), Gaps = 55/365 (15%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAISLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R ++K+ ++ E R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRNTGSQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL A++ F D+ K + F HE +D Q + Sbjct: 330 DKKIGI---LHENFQTLKAEDNFEDIITKPPVRKFVHEKEIV-------AEDDQVFLMKL 379 Query: 330 DSIRA 334 S+ A Sbjct: 380 QSLLA 384 >gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 314 bits (806), Expect = 5e-84, Method: Composition-based stats. Identities = 74/365 (20%), Positives = 132/365 (36%), Gaps = 55/365 (15%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ + R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQIEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 GRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPFD-LWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL A++ F+ + K + F HE +D Q + Sbjct: 330 DKKIGI---LHENFQTLKAEDNFEGIITKPPVRKFVHEKEI-------MAEDDQVFLMKL 379 Query: 330 DSIRA 334 S+ A Sbjct: 380 QSLLA 384 >gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] gi|5531813|gb|AAD44481.1| dynein light chain-A [Homo sapiens] Length = 523 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 74/365 (20%), Positives = 131/365 (35%), Gaps = 55/365 (15%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ + R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E Sbjct: 210 RRNTASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL A++ F D+ K + F HE +D Q + Sbjct: 330 DKKIGI---LHENFQTLKAEDNFEDIITKPPVRKFVHEKEI-------MAEDDQVFLMKL 379 Query: 330 DSIRA 334 S+ A Sbjct: 380 QSLLA 384 >gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light intermediate chain 2 isoform 3 [Bos taurus] Length = 492 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 68/366 (18%), Positives = 128/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V D+S+P + E+++ R ++K+ ++ E + + + Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYVEPEEGCQGSP 195 Query: 173 -----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKEAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|55726458|emb|CAH89998.1| hypothetical protein [Pongo pygmaeus] Length = 492 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 69/366 (18%), Positives = 127/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------AGSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V D+S+P + E+++ R ++K+ +K E + + + Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 173 -----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculus] gi|74183685|dbj|BAE24463.1| unnamed protein product [Mus musculus] gi|74190862|dbj|BAE28215.1| unnamed protein product [Mus musculus] gi|74212500|dbj|BAE30992.1| unnamed protein product [Mus musculus] Length = 492 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 71/366 (19%), Positives = 128/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG--------------ESRSGKQRVP 167 V D+S+P + E+++ R ++K+ ++ E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Homo sapiens] Length = 492 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 69/366 (18%), Positives = 127/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V D+S+P + E+++ R ++K+ +K E + + + Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 173 -----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] gi|73919261|sp|Q9QXU8|DC1L1_RAT Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|6651427|gb|AAF22294.1|AF181992_1 dynein light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 312 bits (799), Expect = 3e-83, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 130/365 (35%), Gaps = 55/365 (15%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSRILREVSTR-----------SRSKLPTGKNVLLLGEDGAGKTSLIRR-IQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ E R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 210 RRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL ++ F D+ K + F HE +D Q + Sbjct: 330 DKKIGI---LHENFQTLKIEDNFEDIITKPPVRKFVHEKEI-------MAEDDQVFLMKL 379 Query: 330 DSIRA 334 S+ A Sbjct: 380 QSLLA 384 >gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Homo sapiens] gi|3287825|sp|O43237|DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|2665836|gb|AAB88513.1| dynein light intermediate chain 2 [Homo sapiens] gi|119603445|gb|EAW83039.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|119603446|gb|EAW83040.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|158256964|dbj|BAF84455.1| unnamed protein product [Homo sapiens] Length = 492 Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 69/366 (18%), Positives = 127/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V D+S+P + E+++ R ++K+ +K E + + + Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 173 -----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-intermediate chain [Xenopus laevis] gi|28280005|gb|AAH45030.1| Dnclic1-prov protein [Xenopus laevis] Length = 508 Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 127/360 (35%), Gaps = 47/360 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + P + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTR-----------SRSKLPFGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ + +V ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDDDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V+D+S+P ++++ R V+K+ ++ E R + + Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKLKIPPEEMREMEERIVRHFQEYVEPGDELPTSP 198 Query: 173 ----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 D L +P+++V +K D D+ E I Sbjct: 199 QRRNTSSDECDDSVILPLADDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFKMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL ++ F D+ K + F HE ++ + + Q Sbjct: 319 DKKIGI---LHENFQTLKPEDTFEDVITKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 375 >gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 [Bos taurus] gi|86438315|gb|AAI12622.1| Similar to Dynein light intermediate chain 1, cytosolic (Dynein light chain A) (DLC-A) [Bos taurus] Length = 524 Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 130/365 (35%), Gaps = 55/365 (15%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G L++ + A ++ V+LV Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDPYHKGLLKFSLDAISLKDTLVMLV 149 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R ++K+ ++ E R + + D Sbjct: 150 VDMSKPWTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQ 209 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L VP+L+V +K D D+ E I Sbjct: 210 RRSTASQEDRDDSVLLPLGADTLTQNLGVPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 269 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+ S K + +I Q +G + IPAG D+ Sbjct: 270 HIRKFCLQYGAALIYASVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 329 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL A++ F D+ K + F HE +D Q + Sbjct: 330 DKKIGI---LHENFQTLKAEDNFEDIITKPPVRKFVHEKEI-------MAEDDQVFLMKL 379 Query: 330 DSIRA 334 S+ A Sbjct: 380 QSLLA 384 >gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] Length = 492 Score = 311 bits (798), Expect = 4e-83, Method: Composition-based stats. Identities = 67/366 (18%), Positives = 126/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL----------- 170 V D+S+P + E+++ R ++K+ ++ + + + Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSP 195 Query: 171 ---------------HKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] gi|73919263|sp|Q6PDL0|DC1L2_MOUSE Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|35193080|gb|AAH58645.1| Dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] Length = 492 Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats. Identities = 71/366 (19%), Positives = 128/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG--------------ESRSGKQRVP 167 V D+S+P + E+++ R ++K+ ++ E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKKLA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|67970473|dbj|BAE01579.1| unnamed protein product [Macaca fascicularis] Length = 492 Score = 310 bits (795), Expect = 8e-83, Method: Composition-based stats. Identities = 69/366 (18%), Positives = 128/366 (34%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS +++ G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKSILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V D+S+P + E+++ R ++K+ +K E + + + Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 173 -----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDSIRA 334 S+ A Sbjct: 366 QQSLLA 371 >gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 [Xenopus tropicalis] gi|111305599|gb|AAI21354.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Xenopus tropicalis] Length = 508 Score = 310 bits (795), Expect = 9e-83, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 127/360 (35%), Gaps = 47/360 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ + +V ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V+D+S+P ++++ R V+K+ ++ E R + + Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKLKIPPEEMKEMEEKIVRNFQEYVEPGEEFPASP 198 Query: 173 ----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 + L +P+++V +K D D+ E I Sbjct: 199 QKRNTSSDEQDDSVILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFLFNMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL ++ F D+ K + F HE ++ + + Q Sbjct: 319 DKKIGI---LHENFQTLKPEDTFEDIITKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 375 >gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Rattus norvegicus] gi|2494218|sp|Q62698|DC1L2_RAT Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|619665|gb|AAA80334.1| LIC-2 gi|149032345|gb|EDL87236.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_b [Rattus norvegicus] Length = 497 Score = 310 bits (794), Expect = 1e-82, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 123/363 (33%), Gaps = 55/363 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL----------- 170 V D+S+P + E+++ R ++K+ ++ + + + Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSP 195 Query: 171 ---------------HKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI+TS K E + +I +G + IPAG D Sbjct: 256 AHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTIPALVVEKDAVFIPAGWD 315 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 316 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 365 Query: 329 IDS 331 Sbjct: 366 QQE 368 >gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Gallus gallus] gi|53126839|emb|CAG30989.1| hypothetical protein [Gallus gallus] Length = 488 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 128/362 (35%), Gaps = 47/362 (12%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + + G GKTT++ + ++ Sbjct: 24 EEEEGQNLWSSILSEVSTR-----------SRSKLPSGKNILVFGDDGSGKTTLMAK-IQ 71 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + + ++W L G + L++ ++A+++ VV Sbjct: 72 GAEHGKKGRGLEYLYLNIHDEDRDDQTRCNVWILDGDLYNKGLLKFAVSAESLQDTIVVF 131 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V D+S+P + E+++ + ++K+ ++ + + + + Sbjct: 132 VADMSRPWTVMESLQKWASVLQEHIDKLKIPPEEMRDMEQKFIKEFQEYVEPEEGYQGSP 191 Query: 173 ----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 + L +P+L+V +K D D+ E I Sbjct: 192 QRRGPSSGQEDESVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQS 251 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K E + +I +G + + IPAG D+ Sbjct: 252 HIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFQFTTPALVVEKDAVFIPAGWDN 311 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +I + T+ + + D K + H+ ++ + + Q Sbjct: 312 EKKIAI---LHENFTTVKPDDAYEDFIAKPPVRKLVHDKELAAEDEQVFLMKQQSFLAKQ 368 Query: 330 DS 331 + Sbjct: 369 PA 370 >gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light chain A [Gallus gallus] gi|2494217|sp|Q90828|DC1L1_CHICK Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) (LIC57/59) gi|510249|emb|CAA55698.1| dyenin light chain A [Gallus sp.] Length = 515 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 67/361 (18%), Positives = 132/361 (36%), Gaps = 48/361 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS ++V +G GKT+++ + ++ Sbjct: 31 EEDDGQNLWSCILSEVSTR-----------SRSKLPSGKSVLLLGEDGAGKTSLIGK-IQ 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++ L G + L++ + A+++ ++L Sbjct: 79 GIEEYKKGRGMEYLYLNVHDEDRDDQTRCNVRILDGDLYHKGLLKFAMEANSLKDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD----- 176 V+D+S+P ++++ R ++K+ ++ E R + + D Sbjct: 139 VVDMSRPWTAMDSLQKWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFPASP 198 Query: 177 ---------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 L +P+++V +K D D+ E I Sbjct: 199 QRRNTSLQEDKDDSVILPLGADTLTCNLGIPVVVVCTKCDAISVLEKEHDYRDEHFDFIQ 258 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K + +I Q +G + IPAG D Sbjct: 259 SHIRRFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFNVPAVVVEKDAVFIPAGWD 318 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +IG + TL A++ F D +K + F HE ++ + + Q Sbjct: 319 NDKKIGI---LHENFQTLKAEDSFEDSIRKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAK 375 Query: 329 I 329 Sbjct: 376 Q 376 >gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibenclamide-sensitive voltage-gated potassium channel, partial [Ornithorhynchus anatinus] Length = 449 Score = 307 bits (788), Expect = 6e-82, Method: Composition-based stats. Identities = 183/343 (53%), Positives = 242/343 (70%), Gaps = 16/343 (4%) Query: 7 DTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA 66 +TLW+IA AEV +E +E +++VFF+GSK GGKTTI+LR L+RDE A Sbjct: 1 ETLWEIARAEVEKKEKPGGGDEG---------EKSVFFVGSKNGGKTTIILRCLDRDEPA 51 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 +PTLALEYTFGRRARGHNTPKDIAH WELGGG SL DL +IPITAD++ + + LDLS Sbjct: 52 RPTLALEYTFGRRARGHNTPKDIAHFWELGGGTSLLDLARIPITADSLRTFATDIFLDLS 111 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVP 186 +P+ LW T E LL + R L + G + R + +D+PDRE I PFP+P Sbjct: 112 RPSELWLTAEHLLRAVRTH----VENLGQPGTRAAATPRTWSPVPEDHPDREFIDPFPIP 167 Query: 187 LLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 L+I+GSK+D+FQ+ DSEKRKVIC+TLRFLAH +GA+L+FT KSE + K+RS I+ LAF Sbjct: 168 LVIIGSKYDVFQNLDSEKRKVICRTLRFLAHHHGATLMFTG-KSEALLLKTRSVISHLAF 226 Query: 247 --GTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVF 304 G +R K+++ D +KPL IPAG DS SQIGPP + DIG L + P +LWK+V+ K F Sbjct: 227 GVGVDRSKALTLDQNKPLFIPAGLDSFSQIGPPPSAAGDIGKLRVQTPLELWKEVYNKAF 286 Query: 305 PHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 P ++ +RK+LKDP +DPQ++E +D++RAQKDQ + +R Q Sbjct: 287 PLQTKSDRKDLKDPGRDPQYAEREVDAMRAQKDQRKKRRERGQ 329 >gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] gi|11992258|gb|AAG42486.1|AF317841_1 cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] Length = 508 Score = 305 bits (782), Expect = 3e-81, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 127/360 (35%), Gaps = 47/360 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ NV ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V+D+S+P ++++ R ++K+ ++ E R + + Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 173 ----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 + L +P+++V +K D D+ E I Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL ++ F D+ K + F HE ++ + + Q Sbjct: 319 DKKIGI---LHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 375 >gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] Length = 508 Score = 304 bits (778), Expect = 9e-81, Method: Composition-based stats. Identities = 67/360 (18%), Positives = 127/360 (35%), Gaps = 47/360 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 LW +EV +R + PS + V +G GKT+++ + + Sbjct: 31 EDEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVLLLGEDGAGKTSLIGKL-Q 78 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K +EY + + ++W L G + L++ NV ++L Sbjct: 79 GIEEYKKGRGMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V+D+S+P ++++ R ++K+ ++ E R + + Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 173 ----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 + L +P+++V +K D D+ E I Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + + IPAG D+ Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMPAVVVEKDAVFIPAGWDN 318 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +IG + TL ++ F D+ K + F HE ++ + + Q Sbjct: 319 DRKIGI---LHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 375 >gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light intermediate chain 2, cytosolic (LIC53/55) (LIC-2) [Canis familiaris] Length = 481 Score = 302 bits (775), Expect = 2e-80, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 123/358 (34%), Gaps = 55/358 (15%) Query: 10 WDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPT 69 W +EV +R + PS + + G GKTT++ + + E K Sbjct: 25 WSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-QGAEHGKKG 72 Query: 70 LALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPN 129 LEY + ++W L G + L++ ++A+++ V+ V D+S+P Sbjct: 73 RGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSRPW 132 Query: 130 ALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL------------------- 170 + E+++ R ++K+ ++ E + + Sbjct: 133 TVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEPEEGCQGSPQRRGPLTS 192 Query: 171 -------HKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 D L +P+L+V +K D D+ E I LR Sbjct: 193 GPDEENVALPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQSHLRRFCL 252 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGA+LI+TS K E + +I +G + IPAG D+ +I Sbjct: 253 QYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFVTPALVVEKDAVFIPAGWDNEKKIAI- 311 Query: 278 VATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRA 334 + T+ ++ + D K + H+ +D Q S+ A Sbjct: 312 --LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMKQQSLLA 360 >gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Xenopus laevis] gi|112419317|gb|AAI22489.1| MGC154222 protein [Xenopus laevis] Length = 487 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 126/363 (34%), Gaps = 48/363 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW ++V + + PS + + G GKTT++ + + Sbjct: 21 EEDEGQSLWSSILSDVST-----------SARSKLPSGKNILVFGEDGSGKTTLMAKL-Q 68 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ + A+++S V Sbjct: 69 GAEHNKKGRGLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESISETVAVF 128 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V D+S+P + E++ R ++K+ ++ E + + + Sbjct: 129 VGDMSRPWTIMESLLKWASVLREHIDKLKIPPEEMRELEQKIIKDFQEYVEPEEALSGSP 188 Query: 173 -----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 189 QRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDFIQ 248 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YG++LI+TS K E + +I + ++ + IPAG D Sbjct: 249 SHIRKFCLQYGSALIYTSVKEEKNLDLLYKYIVHKTYNFHFNRAAMVVEKDSVFIPAGWD 308 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +IG + T+ ++ + D K + H+ ++ + + Q Sbjct: 309 NEKKIGI---LHENFSTVKPEDAYEDFIVKPPVRKLVHDKEVAAEDEQVFLMKQQSYLAK 365 Query: 329 IDS 331 + Sbjct: 366 QPA 368 >gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon nigroviridis] Length = 463 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 122/355 (34%), Gaps = 53/355 (14%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 ++V +R + PS + + G GKTT++ + E E K Sbjct: 1 SSILSDVSTR-----------SSSKLPSGKNILVFGEDGSGKTTLMAKL-EGAEHNKKGR 48 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + ++W L G + L++ ++A ++S V V+D+S+P Sbjct: 49 GLEYLYLSVHDEDRDDLTRCNVWILDGDLYHKGLLKFAVSAKSLSDCLAVFVVDMSRPWI 108 Query: 131 LWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK------------------ 172 + ++++ R+ ++K+ E + + + Sbjct: 109 IMDSLQKWSSVLRDHLDKLKIEPDVMREMEQKMVKAFQEYSEPEDANSSSPQRRAPTAGE 168 Query: 173 ------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYG 220 + L +P+L+V +K D D+ E I +R YG Sbjct: 169 DEAVVLPLGENTLTHNLGIPVLVVCTKCDAVSVLEKEHDYKEEHFDFIQSHIRKFCLQYG 228 Query: 221 ASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVAT 280 A L +TS K E + +I + + + IP+G D+ +I Sbjct: 229 AGLFYTSVKEEKNLDLLYKYIVHKLYDFQFTTPALVVEKDAVFIPSGWDNEKKIAI---L 285 Query: 281 EVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRA 334 ++ T+ ++PF D K + HE +D Q S+ A Sbjct: 286 HENLSTVRPEDPFEDFIAKPPVRKLVHEKEIN-------AEDEQVFLMKQQSLLA 333 >gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] Length = 480 Score = 294 bits (754), Expect = 6e-78, Method: Composition-based stats. Identities = 61/363 (16%), Positives = 122/363 (33%), Gaps = 50/363 (13%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW ++V + + PS + + G GKTT++ + + Sbjct: 16 EEDEGQSLWSSILSDVST-----------SARSKLPSGKNILVFGEDGSGKTTLVAKL-Q 63 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ + A+++ V Sbjct: 64 GAEHNKKGRGLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESIGETVAVF 123 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V D+S+P + E++ R ++K+ ++ E + + + Sbjct: 124 VGDMSRPWTIMESLLKWASVLREHIDKLKIPPEEIRELEQKIIKDFQEYVEPEDALSGSP 183 Query: 173 -----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 184 QRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDFIQ 243 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 +R YGA+LI+TS K E + +I + + + IPAG D Sbjct: 244 SHIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYNFHFNCAAMVVEKDSVFIPAGWD 303 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +IG + ++ + D K + H+ ++ + + Q Sbjct: 304 NEKKIGI---LHENF--SKPEDAYEDFIVKPPVRKLVHDKEVAAEDEQVFLMKQQSYLAK 358 Query: 329 IDS 331 + Sbjct: 359 QPA 361 >gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic, light intermediate polypeptide 2 [Macaca mulatta] Length = 497 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 66/371 (17%), Positives = 126/371 (33%), Gaps = 60/371 (16%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD-------- 173 V D+S+P + E+++ R ++K+ +K E + + + Sbjct: 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSP 195 Query: 174 ------------------YPDRELISPFPVPLLIVGSKFDIF-----------QDFDSEK 204 D L +P+L+V +K F + Sbjct: 196 QRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKVRARGLLAWLGSGSEHAFREKN 255 Query: 205 RKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 ++ LR YGA+LI+TS K E + +I +G + I Sbjct: 256 VRIFDSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFI 315 Query: 265 PAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQ 323 PAG D+ +I + T+ ++ + D K + H+ +D Q Sbjct: 316 PAGWDNEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQ 365 Query: 324 FSEPLIDSIRA 334 S+ A Sbjct: 366 VFLMKQQSLLA 376 >gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] Length = 335 Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats. Identities = 68/335 (20%), Positives = 122/335 (36%), Gaps = 48/335 (14%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 16 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 63 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + ++W L G + L++ + A ++ V+LV Sbjct: 64 IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 123 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD------ 176 +D+SKP ++++ R V+K+ ++ + R + + D Sbjct: 124 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQ 183 Query: 177 --------------------RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 L +P+L+V +K D D+ E I Sbjct: 184 RRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQS 243 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA+LI+TS K + +I Q +G + IPAG D+ Sbjct: 244 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDN 303 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVF 304 +IG + TL A++ F D+ K + Sbjct: 304 DKKIGI---LHENFQTLKAEDNFEDIITKPPVRKV 335 >gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632687|emb|CAM56700.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 489 Score = 289 bits (739), Expect = 3e-76, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 125/358 (34%), Gaps = 45/358 (12%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V MG GKTT++ + + Sbjct: 25 EEEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVVVMGEVGSGKTTLVAKL-Q 72 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E LEY + + + W L G + L + I+ +N+ ++ Sbjct: 73 GVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 132 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V+DLS+P ++++ R+ V+K+ + E + + + Sbjct: 133 VVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVP 192 Query: 173 --------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 + L +P+++V +K D D+ E I + Sbjct: 193 QRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHI 252 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+L++TS K + ++ +G + IP+G D+ Sbjct: 253 RRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEK 312 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +I + + A++ F D+ K + F HE + ++ + + Q Sbjct: 313 KIAI---LHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQVFLVKLQSLLSKQ 367 >gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] Length = 485 Score = 288 bits (738), Expect = 4e-76, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 125/358 (34%), Gaps = 45/358 (12%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V MG GKTT++ + + Sbjct: 21 EEEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVVVMGEVGSGKTTLVAKL-Q 68 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E LEY + + + W L G + L + I+ +N+ ++ Sbjct: 69 GVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 128 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V+DLS+P ++++ R+ V+K+ + E + + + Sbjct: 129 VVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVP 188 Query: 173 --------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 + L +P+++V +K D D+ E I + Sbjct: 189 QRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHI 248 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+L++TS K + ++ +G + IP+G D+ Sbjct: 249 RRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEK 308 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +I + + A++ F D+ K + F HE + ++ + + Q Sbjct: 309 KIAI---LHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQVFLVKLQSLLSKQ 363 >gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light intermediate chain 1 [Danio rerio] gi|94733316|emb|CAK11123.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632686|emb|CAM56699.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 501 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 125/358 (34%), Gaps = 45/358 (12%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + LW +EV +R + PS + V MG GKTT++ + + Sbjct: 27 EEEDGQNLWSSILSEVSTR-----------SRSKLPSGKNVVVMGEVGSGKTTLVAKL-Q 74 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E LEY + + + W L G + L + I+ +N+ ++ Sbjct: 75 GVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 134 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK--------- 172 V+DLS+P ++++ R+ V+K+ + E + + + Sbjct: 135 VVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLTKQFQEYVEPGSDLDAVP 194 Query: 173 --------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTL 212 + L +P+++V +K D D+ E I + Sbjct: 195 QRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHI 254 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R YGA+L++TS K + ++ +G + IP+G D+ Sbjct: 255 RRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQVVEKDSVFIPSGWDNEK 314 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 +I + + A++ F D+ K + F HE + ++ + + Q Sbjct: 315 KIAI---LHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQVFLVKLQSLLSKQ 369 >gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein light intermediate chain 2, partial [Equus caballus] Length = 490 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 66/366 (18%), Positives = 121/366 (33%), Gaps = 55/366 (15%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 26 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 73 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 74 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 133 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL----------- 170 V D+S+P + E+++ R ++K+ ++ E + + Sbjct: 134 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEPEEGCQGSP 193 Query: 171 ---------------HKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 194 QRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHFDFIQ 253 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR YGA+LI TS K ++ I S PAG D Sbjct: 254 SHLRRFCLQYGAALIDTSVKEAKSLDLKNKCIIHPTSNDPVTSPGKASQSLFAFRPAGWD 313 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 314 NEKKIAI---LHENFTTVKPEDVYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 363 Query: 329 IDSIRA 334 S+ A Sbjct: 364 QQSLLA 369 >gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A isoform 1 [Pan troglodytes] Length = 472 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 72/348 (20%), Positives = 125/348 (35%), Gaps = 51/348 (14%) Query: 20 RESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRR 79 RE + + PS G GKT+++ R ++ E K LEY + Sbjct: 4 REGEHETLDPGPAGTRPPS-------GEDGAGKTSLI-RKIQGIEEYKKGRGLEYLYLNV 55 Query: 80 ARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLL 139 + ++W L G + L++ + A ++ V+LV+D+SKP ++++ Sbjct: 56 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWA 115 Query: 140 GSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPD----------------------- 176 R V+K+ ++ + R + + D Sbjct: 116 SVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVLP 175 Query: 177 ---RELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTS 227 L +P+L+V +K D D+ E I +R YGA+LI+TS Sbjct: 176 LGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTS 235 Query: 228 SKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTL 287 K + +I Q +G + IPAG D+ +IG + TL Sbjct: 236 VKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIGI---LHENFQTL 292 Query: 288 HAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRA 334 A++ F D+ K + F HE +D Q + S+ A Sbjct: 293 KAEDNFEDIITKPPVRKFVHEKEI-------MAEDDQVFLMKLQSLLA 333 >gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein, partial [Gallus gallus] Length = 388 Score = 280 bits (718), Expect = 8e-74, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 126/354 (35%), Gaps = 47/354 (13%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 +EV +R + PS +T+ +G GKTT++ + + E + Sbjct: 1 SSILSEVSTR-----------SRSKLPSGKTILVLGDNGSGKTTLMAKL-QGAEHGQKGR 48 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + ++W L G I L++ ++A+++ V+ V+D+S+P Sbjct: 49 GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWT 108 Query: 131 LWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD----------------- 173 + E++E G R ++K+ ++ + + + + Sbjct: 109 VMESLEKWAGVLREHIDKLKIPPEEMRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQ 168 Query: 174 --------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + L +P+L+V +K D + + E I +R Y Sbjct: 169 ENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQY 228 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 GA+LI+TS K E + ++ +G + + IPAG D+ +I Sbjct: 229 GAALIYTSVKGEKNLDLLYKYLVHKMYGFQLTTPALVVEKDAVFIPAGWDNEKKIAI--- 285 Query: 280 TEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSI 332 + + + D K + H + ++ +K Q + + Sbjct: 286 LHENFTRVKPGYAYEDFIAKPRVRKLVHTELVTAEADQEFLKRMQSLLAKLPEM 339 >gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin light chain A [Ornithorhynchus anatinus] Length = 471 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 64/337 (18%), Positives = 126/337 (37%), Gaps = 37/337 (10%) Query: 26 EEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNT 85 ++ +H ++ T + G GKT+++ + ++ + K +EY + Sbjct: 1 MALSQAPSSHLLAKGTAWGQGEDGAGKTSLIGK-MQGIDEYKKGRGMEYLYLNVHDEDRD 59 Query: 86 PKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 + ++W L G + L++ + A+++ V+LV+D+SKP ++++ R Sbjct: 60 DQTRCNVWILDGDLYHKGLLKFAMDANSLKDTLVMLVVDMSKPWTALDSLQKWASVVREH 119 Query: 146 VEKVCAALQKTGESRSGKQRVPRVLHKDYPD--------------------------REL 179 ++K+ ++ E R + + D L Sbjct: 120 IDKLKIPPEEMKEMEQKLIRDFQEYIEPGEDFPASPQRRNTTSQEDKDDSVILPLGADTL 179 Query: 180 ISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 +P+L+V +K D D+ E I +R YGA+LI+TS K Sbjct: 180 TYNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKN 239 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF 293 + +I Q +G + IPAG D+ +IG + TL A++ F Sbjct: 240 IDLVYKYIVQKLYGFPFKIPAVVVEKDAVFIPAGWDNDKKIGI---LHENFQTLKAEDSF 296 Query: 294 -DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 D+ K + F HE ++ + + Q Sbjct: 297 EDIIIKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 333 >gi|157119433|ref|XP_001653379.1| conserved hypothetical protein [Aedes aegypti] gi|108883162|gb|EAT47387.1| conserved hypothetical protein [Aedes aegypti] Length = 347 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 115/355 (32%), Positives = 189/355 (53%), Gaps = 25/355 (7%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 M +++T+ DIA V + E P++RT+F +GSK GK+T++ RFL Sbjct: 10 MEPDTTETIQDIAMKLVTE------HMKQESSLTGGPTERTIFVLGSKGAGKSTLINRFL 63 Query: 61 ERDETAKPTLALEYTFGRRARGHNT-PKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 +RD+ +PTLALEY+FGRR K+I ++WELG ++ + L+++P+ + ++ + Sbjct: 64 DRDDITRPTLALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAAFAA 123 Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 V+VLDLS+P+ LW ++ +L + + K C+ E ++R+ + + D+ D Sbjct: 124 VIVLDLSQPDRLWTDLQCILNGLKQAISKNCSP----KEVSEMQERMKQKVGLDHEDLNT 179 Query: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 + P P++IVG K+D FQ+ DSE +K +C+ LR ++H GA+LIF +SK+ + R Sbjct: 180 LEILPFPVIIVGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRD 239 Query: 240 FINQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 +N L FG+ K+ + D + P+ +P G DS +IG IG Sbjct: 240 AMNHLGFGSPSNPFKATALDHNGPIVVPFGGDSWEKIGVTPTNSERIGMS---------- 289 Query: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 + P T + DP KD F E +ID +RAQKD EL + ++ K Sbjct: 290 --YSAQIPQVGTEKVSIPDDPAKDGGFKERVIDELRAQKDDELMRLLKDTEMRMK 342 >gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosophila melanogaster] gi|24641224|ref|NP_727500.1| Dlic2 CG1938-PC, isoform C [Drosophila melanogaster] gi|24641226|ref|NP_727501.1| Dlic2 CG1938-PD, isoform D [Drosophila melanogaster] gi|16182605|gb|AAL13531.1| GH06357p [Drosophila melanogaster] gi|22832089|gb|AAF48011.2| CG1938-PA, isoform A [Drosophila melanogaster] gi|22832090|gb|AAN09288.1| CG1938-PC, isoform C [Drosophila melanogaster] gi|22832091|gb|AAN09289.1| CG1938-PD, isoform D [Drosophila melanogaster] Length = 493 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 65/377 (17%), Positives = 127/377 (33%), Gaps = 54/377 (14%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 + LW EV+++ PS ++V +G A GKTT++ + + E Sbjct: 26 EKENLWSAILNEVQTQG-----------STKLPSNKSVLVLGDNATGKTTLIAKL-QGVE 73 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + +W L G ++L+ + N + V+L + Sbjct: 74 DPKKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVS 133 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL-------------- 170 +++P E + + ++ + ++ +R + Sbjct: 134 MTQPWGWLEQLNHWIKVLGQHIDSLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVK 193 Query: 171 ------------HKDYPDRELISPFPVPLLIVGSKFDIFQ------DFDSEKRKVICKTL 212 + LI+ + +++V +K D ++ E I + + Sbjct: 194 RTMRNNSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWI 253 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R +G SL +TS K + ++ +G + IPAG DSL Sbjct: 254 RNFCLRHGTSLFYTSVKEDKNCDVLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLK 313 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDS 331 +I ++ + A+NP+ D+ K + E + +D Q Sbjct: 314 KISI---LYENMHGVKAENPYTDIIKSPPTRKAVSNREAEVQ-----TEDEQAFLARQQE 365 Query: 332 IRAQKDQ-ELDQYKREQ 347 I Q DQ + R Q Sbjct: 366 ILKQGDQVRGESPLRSQ 382 >gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 374 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 59/325 (18%), Positives = 117/325 (36%), Gaps = 47/325 (14%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 +EV +R + PS +T+ +G GKTT++ + + E + Sbjct: 64 SSILSEVSTR-----------SRSKLPSGKTILVLGDNGSGKTTLMAKL-QGAEHGQKGR 111 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + ++W L G I L++ ++A+++ V+ V+D+S+P Sbjct: 112 GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWT 171 Query: 131 LWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD----------------- 173 E++E G R ++K+ ++T + + + + Sbjct: 172 AMESLEKWAGVLREHIDKLKIPPEETRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQ 231 Query: 174 --------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 + L +P+L+V +K D + + E I +R Y Sbjct: 232 ENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQY 291 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 GA+LI+TS K E + ++ +G + + IPAG D+ +I Sbjct: 292 GAALIYTSVKGEKNLDLLYKYLVHKMYGFQLTTPALVVEKDAVFIPAGWDNEKKIAI--- 348 Query: 280 TEVDIGTLHAKNPF-DLWKKVFEKV 303 + + + D K + Sbjct: 349 LHENFTRVKPGYAYEDFIAKPRVRK 373 >gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae str. PEST] gi|116118470|gb|EAA13896.3| AGAP010165-PA [Anopheles gambiae str. PEST] Length = 339 Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats. Identities = 121/356 (33%), Positives = 189/356 (53%), Gaps = 26/356 (7%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 M +++T+ DIA V + P++RT+F +GSK GK+T++ RFL Sbjct: 1 MEVDTTETIQDIAIKLVTEQLRNESRLATT------PTERTLFVLGSKGVGKSTLINRFL 54 Query: 61 ERDETAKPTLALEYTFGRRARGHNT-PKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 +RD+ +PTLALEY+FGR+ K+I ++WELG + S L+++PI + + S Sbjct: 55 DRDDVPRPTLALEYSFGRKTASGQGAQKNICNVWELGSLANSSQLIEMPIRSHGLQTFSC 114 Query: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 +++LDLS+P+ LW +ES+L + K G+ K+ + + K++PD Sbjct: 115 IVMLDLSQPDRLWTDLESVLNGLKQATAKHAV----AGQIEEMKELTAQRIGKEHPDLST 170 Query: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 + FP P++IVG K+DI+Q+ DSE RK +C+ LR +AH GA+L++ S+K+ + R Sbjct: 171 LELFPFPIVIVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRD 230 Query: 240 FINQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 +N L FG+ ++ S D S PLAIP G+DS ++IG + IG Sbjct: 231 TMNHLGFGSPSNPFRAASFDHSSPLAIPFGADSWARIGVTPSNSERIGLS---------- 280 Query: 298 KVFEKVFPHESTRERKEL-KDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 F P L DP KD F E ID +R+QKD+EL ++ K Sbjct: 281 --FSTQIPQLPIGNGGILPDDPAKDAGFKEASIDELRSQKDEELMYVLKDTEIRMK 334 >gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon nigroviridis] Length = 400 Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 122/352 (34%), Gaps = 43/352 (12%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 +EV + + PS + V MG GKTT++ + + + Sbjct: 1 STILSEVST-----------HSRSKLPSGKNVLVMGEVGSGKTTLVAKL-QGVDEYMKGR 48 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + + W L G + L + + D++ +++ +D+S+P Sbjct: 49 GLEYLYFSVHDDDIDDHARCNAWVLDGDLYHKGLQGVAVPVDSIGNTLLLITVDMSRPWN 108 Query: 131 LWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK------------------ 172 ++++ AR ++K+ A + E + + + Sbjct: 109 ALDSLQKWAAVAREHIDKLRVAPETLRELEHNLVKQFQEYVEPGSGEDGTPQRRSEDEES 168 Query: 173 ---DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASL 223 D L +P+++V +K D D+ E I LR YGASL Sbjct: 169 ILLPLGDSTLTHNLGIPVVVVCTKCDAIGTLEKEHDYRDEHLDFIQSHLRRFCLQYGASL 228 Query: 224 IFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVD 283 ++TS K + ++ +G P + IP+G D+ +I + Sbjct: 229 VYTSVKEMKNLDILYKYLVHRLYGFPFPCPAQVVERDAVFIPSGWDNEKKIAI---LHEN 285 Query: 284 IGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRA 334 T + + F D+ K + HE + ++ + + Q ++ A Sbjct: 286 FQTFKSDDTFEDVIVKPPVRKIVHEKEIQAEDDQVFLVKLQSLLAKQPAVTA 337 >gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoobscura] gi|54643019|gb|EAL31763.1| GA15140-PA [Drosophila pseudoobscura] Length = 499 Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 63/377 (16%), Positives = 126/377 (33%), Gaps = 54/377 (14%) Query: 5 SSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE 64 + LW EV+++ P+ ++V +G A GKTT++ + + E Sbjct: 28 EKENLWSAILNEVQTQG-----------STKLPANKSVLVLGDNATGKTTLIAKL-QGVE 75 Query: 65 TAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLD 124 K LEY + + +W L G ++L+ + N + V+L + Sbjct: 76 DPKKGSGLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHFALNETNYAHTLVILTVS 135 Query: 125 LSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL-------------- 170 +++P E + + +E + + +R + Sbjct: 136 MTQPWGWLEQLNHWIKVLGQHIESLPLEAKDKEMARQRLATTWQSYCEVGDDLDPGSPVK 195 Query: 171 ------------HKDYPDRELISPFPVPLLIVGSKFDIFQ------DFDSEKRKVICKTL 212 + LI+ + +++V +K D ++ E I + + Sbjct: 196 RTMRNNSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWI 255 Query: 213 RFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS 272 R GASL +TS K + ++ +G + IPAG DSL Sbjct: 256 RSFCLRTGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDSLK 315 Query: 273 QIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDS 331 +I ++ + A++P+ D+ K + ++ +D Q Sbjct: 316 KISI---LYENMHGIKAESPYSDVIKAPPTRKAVSNRE-----VEVQTEDEQTFLARQQE 367 Query: 332 IRAQKDQE-LDQYKREQ 347 I Q Q+ + R Q Sbjct: 368 ILKQAGQDRGESPLRSQ 384 >gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, isoform A [Tribolium castaneum] Length = 475 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 59/391 (15%), Positives = 129/391 (32%), Gaps = 60/391 (15%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEED--AHFPSQRTVFFMGSKAGGKTTILLR 58 MP+ + D + + + + PS + V +G GKTTI+ + Sbjct: 1 MPEEVAKPTDDS------KKNLWSQILSDVQNNGNPKLPSCKQVLVLGDNECGKTTIVAK 54 Query: 59 FLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLS 118 + E K LEY + + + +W L G +DL++ + + Sbjct: 55 L-QGVEDPKKGSGLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHTDLLKFALNEETFQHTL 113 Query: 119 VVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD----- 173 V+L + ++ P ++ E ++ + ++K+ + R ++ + + Sbjct: 114 VILTVTMTAPWSILEQLQHWASVLADHLDKLKLDVDLRQNRRQHIVKMWQEYVEPGDELD 173 Query: 174 ------------------------YPDRELISPFPVPLLIVGSKFDIF------QDFDSE 203 P+ L + + +++V +K D D+ E Sbjct: 174 PASPMKRSSRNFGDGEDGLEEQTSLPEGTLTNNLGLDIVVVVTKTDYIQTLEKEHDYRDE 233 Query: 204 KRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 + + +R YGA+L +TS+K + ++ +G + Sbjct: 234 HLDFMQQWIRKFCLQYGAALFYTSAKEDKNCDLLYKYLTHRIYGFPFRTPALVVEKDAVF 293 Query: 264 IPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDP 322 IPAG D++++I ++ T + F D+ + + + T +D Sbjct: 294 IPAGWDNMNKI---RILYENLHTCKPDDYFRDIIVQPATRKTINRETELL------AEDE 344 Query: 323 QFSEPLIDSIR------AQKDQELDQYKREQ 347 Q I Q + + R Sbjct: 345 QAFLARQQQILFAGGNNLQGPRLGETPIRSS 375 >gi|157128066|ref|XP_001661298.1| dynein light intermediate chain [Aedes aegypti] gi|108872707|gb|EAT36932.1| dynein light intermediate chain [Aedes aegypti] Length = 494 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 61/391 (15%), Positives = 131/391 (33%), Gaps = 56/391 (14%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD 63 + LW +EV+++ PS ++V +G A GKTT++ + + Sbjct: 26 DPKENLWSAILSEVQTQ-----------SSTKLPSNKSVLVLGDNASGKTTLIAKL-QGV 73 Query: 64 ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVL 123 E K LEY + + +W L G ++L++ + N + V+L L Sbjct: 74 EDPKKGSGLEYAYIDVRDEYRDDVTRLGVWILDGDPGHTNLLKYALNETNYAHTLVILTL 133 Query: 124 DLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL------------- 170 ++ P + + +E + + + + ++ + R V + Sbjct: 134 SMTTPWSWVDQLEHWIKMLDDHIAGLKIDPEERQQCRQRLVTVWQSYCDTIDELDPGSPI 193 Query: 171 --------------HKDYPDRELISPFPVPLLIVGSKFDIFQ------DFDSEKRKVICK 210 P+ L + + +++V +K D D+ E + + Sbjct: 194 KRTNRLSSVDDDLDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQ 253 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGASL +TS K + ++ +G + IPAG D+ Sbjct: 254 WIRRFCLVYGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRTPALIVEKDAVLIPAGWDN 313 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 + +I ++ + + + D+ + + E + ++ Q Sbjct: 314 MKKINI---LYENMQSCKPDDYYNDIIAQPPSRKTVSNREIEVQ-----TEEEQAFLSRQ 365 Query: 330 DSIRAQKD--QELDQYKREQAKSWKSLALDP 358 + Q + R Q + K+ P Sbjct: 366 LQLLQQGQTPTRGESPMRSQNSASKTSPRTP 396 >gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_b [Mus musculus] Length = 458 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 61/366 (16%), Positives = 113/366 (30%), Gaps = 89/366 (24%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG--------------ESRSGKQRVP 167 V D+S+P + E+++ R ++K+ ++ E G Q P Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEPEEGCQGSP 195 Query: 168 RVLH------------KDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 + D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR G + IPAG D Sbjct: 256 AHLRRFCLQC-------------------------ILGM---------LKDAVFIPAGWD 281 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 282 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 331 Query: 329 IDSIRA 334 S+ A Sbjct: 332 QQSLLA 337 >gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_a [Rattus norvegicus] Length = 455 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 56/366 (15%), Positives = 111/366 (30%), Gaps = 92/366 (25%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 + +LW +EV +R + PS + + G GKTT++ + + Sbjct: 28 EEEEGQSLWSSILSEVSTR-----------ARSKLPSGKNILVFGEDGSGKTTLMTKL-Q 75 Query: 62 RDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 E K LEY + ++W L G + L++ ++A+++ V+ Sbjct: 76 GAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIF 135 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL----------- 170 V D+S+P + E+++ R ++K+ ++ + + + Sbjct: 136 VADMSRPWTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEPEEGCQGSP 195 Query: 171 ---------------HKDYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVIC 209 D L +P+L+V +K D D+ E I Sbjct: 196 QRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRDEHLDFIQ 255 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 LR + + IPAG D Sbjct: 256 AHLRGFC-------------------------------------LQFVEKDAVFIPAGWD 278 Query: 270 SLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 + +I + T+ ++ + D K + H+ +D Q Sbjct: 279 NEKKIAI---LHENFTTVKPEDAYEDFIVKPPVRKLVHDKELA-------AEDEQVFLMK 328 Query: 329 IDSIRA 334 S+ A Sbjct: 329 QQSLLA 334 >gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70877049|gb|EAN90434.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 422 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 102/379 (26%), Positives = 179/379 (47%), Gaps = 39/379 (10%) Query: 1 MPKVSSDTLWDIAAAEV-RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRF 59 MP+V+ D D+ + +RE++ + ++ V +G+ GGKT++L R Sbjct: 50 MPQVTVDPTKDLWQNIILNTRENQVTQ-----------TEVNVLIVGTSGGGKTSLLRRI 98 Query: 60 LERDETA-----------KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIP 108 T+ KPT AL+Y+F RR +AH WEL G+ LS L ++ Sbjct: 99 FSGVNTSSSSVPKSFLRVKPTTALDYSFVRR--NDRHIAQVAHFWELAQGMELSQLCEVV 156 Query: 109 ITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGE--SRSGKQRV 166 IT +NV + + +V+D S+P+ +W+T+ + +V ++ ++ G R Sbjct: 157 ITPENVHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRA 216 Query: 167 PRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFT 226 R++ ++PD + VP +I+ +K D F + K + +++RF+AH YGA L+FT Sbjct: 217 KRLVGMEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFT 275 Query: 227 SSKSETTMSKSRSFINQLAFGTER-PKSISTD-PSKPLAIPAGSDSLSQIGPPVATEVDI 284 S K R+ +N L F + K I D + + +D+ + IG P +++ Sbjct: 276 SDAEAI---KLRAVMNHLVFVSTFDLKHIELDPERGAVLVIPSADTFADIGEPAVSDMGG 332 Query: 285 GTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVK------DPQFSEPLIDSIRAQKDQ 338 D WK + +FP + + R + +K + F EP +D++R QK+ Sbjct: 333 LQSTGDAELDRWKAPLDAMFPAKQSEGRMQNDSFLKRLYDTGENGFGEPTVDAVRKQKED 392 Query: 339 ELDQYKREQAKSWKSLALD 357 EL+QY++ K KS D Sbjct: 393 ELEQYRKSAFKREKSTKDD 411 >gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938-PA, isoform A [Apis mellifera] Length = 470 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 122/369 (33%), Gaps = 64/369 (17%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 + D LW AEV PS + + +G GKTT++ + + Sbjct: 23 PENKDNLWSSILAEV-----------QNSSSNKLPSNKNILVLGDNESGKTTLIAKL-QG 70 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LE+ + + + +W L G ++L++ + A+ V+LV Sbjct: 71 VEDPKKGSGLEFAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLRFALNAERFPHTLVMLV 130 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK---------- 172 ++ P A+ + ++S + ++K+ R + + + Sbjct: 131 AAMTTPWAILDQLQSWAALLGDHIDKLPLDNDTWQRCRQLNVKKWQDYTEPGDELDPGSP 190 Query: 173 ----------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICK 210 P+ L + + +++V +K D D+ E I + Sbjct: 191 LRRTSRNLDDDTMDNLPLPEGVLTTNLGLDVVVVITKTDYMSTLEKEHDYKDEHFDFIQQ 250 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 +R YGA L +TS+K + ++ + + IPAG D+ Sbjct: 251 WIRRFCLQYGAGLFYTSAKEDKNCDLLYKYLTHRIYSLPFRTPALVVEKDAVLIPAGWDN 310 Query: 271 LSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKV----------------FPHESTRERK 313 + +I ++ ++ + + D+ + F + Sbjct: 311 MKKISI---LHENLQSMKPDDYYRDVIAQPSINRKCVAREVEVQAEEEQAFLAKQQAALL 367 Query: 314 ELKDPVKDP 322 +KDP + P Sbjct: 368 GVKDPTRSP 376 >gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] Length = 433 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 112/315 (35%), Gaps = 34/315 (10%) Query: 45 MGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDL 104 MG GKTT++ + + E LEY + + + W L G + L Sbjct: 1 MGEVGSGKTTLVAKL-QGVEEYMKGRGLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGL 59 Query: 105 VQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQ 164 + I+ +N+ ++ V+DLS+P ++++ R+ V+K+ + E Sbjct: 60 QKFAISLENLEDSLILFVVDLSRPWLALDSLQKWGSVVRDFVDKLRVPPETMRELEHRLT 119 Query: 165 RVPRVLHK-----------------------DYPDRELISPFPVPLLIVGSKFDIF---- 197 + + + + L +P+++V +K D Sbjct: 120 KQFQEYVEPGSDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLE 179 Query: 198 --QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS 255 D+ E I +R YGA+L++TS K + ++ +G Sbjct: 180 KEHDYKDEHLDFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSPAQ 239 Query: 256 TDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKE 314 + IP+G D+ +I + + A++ F D+ K + F HE + ++ Sbjct: 240 VVEKDSVFIPSGWDNEKKIAI---LHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAED 296 Query: 315 LKDPVKDPQFSEPLI 329 + + Q Sbjct: 297 DQVFLVKLQSLLSKQ 311 >gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00000001598 [Nasonia vitripennis] Length = 486 Score = 250 bits (640), Expect = 7e-65, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 125/365 (34%), Gaps = 57/365 (15%) Query: 4 VSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD 63 + D LW A+V + PS + V +G GKTT++ + + Sbjct: 25 ENEDNLWSSILAQV-----------QNSSNNKLPSNKNVLVLGDNESGKTTLIAKL-QGV 72 Query: 64 ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVL 123 E K LEY + + + +W L G ++L++ + A V+LV Sbjct: 73 EDPKKGSGLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLKFALNAKRFPNTLVMLVA 132 Query: 124 DLSKPNALWETMESLLGSARNQVEKVCAAL----QKTGESRSGKQRVPRVLHK------- 172 ++ P AL + ++ + ++K+ + Q + R ++ + + Sbjct: 133 AMTTPWALLDQLQFWSRVLGDHIDKLASDNDDFKQTWQDCRQQIKKKWQDYTEPGDDLDP 192 Query: 173 -------------------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKV 207 PD L + + +++V +K D D+ E Sbjct: 193 GSPLRRTSRNLDDESVDNLPLPDGVLTTNLGLDIVVVITKTDYMSTLEKEHDYRDEHFDF 252 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + + +R YGA L +TS K + ++ + + IPAG Sbjct: 253 MQQWIRRFCLQYGAGLFYTSVKEDKNCDLLYKYLTHRIYSLPFRTPALVVEKDAVLIPAG 312 Query: 268 SDSLSQIGPPVATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSE 326 D++ +I ++ ++ + + D+ K P +++++ +D Q Sbjct: 313 WDNMKKISI---LHENLQSMKPDDYYRDVIVKP-----PSNRKSVQRQVEVQTEDEQAFL 364 Query: 327 PLIDS 331 Sbjct: 365 TRQQE 369 >gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated family member (xbx-1) [Caenorhabditis elegans] gi|77799271|emb|CAB01645.2| Hypothetical protein F02D8.3 [Caenorhabditis elegans] Length = 370 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 122/355 (34%), Positives = 204/355 (57%), Gaps = 21/355 (5%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHF------------PSQRTVFFMGSKAGGKTTI 55 +WD+A ++ + R E + + +D + + + F G++ GK++ Sbjct: 2 NIWDLAKQKLVENKQRAAELKQKLDDENGTQSDNYLSEVRRRHESHIIFAGNRKSGKSSF 61 Query: 56 LLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVS 115 +L FLER E K ++ LEYT+ RR RG KDIA+LWELGGG ++++L+ +PIT NV Sbjct: 62 MLNFLERKEDLKDSVGLEYTYARRTRG--NVKDIANLWELGGGATVTELLSVPITMKNVE 119 Query: 116 FLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP 175 S++L+LD++ + +W T+E + S R V + ++R ++ R+ D Sbjct: 120 ICSLILLLDMTNLDEMWITIEKTVDSVRRLV-ENLERQDINLQTRLAEKMRLRLEKYDDG 178 Query: 176 DRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMS 235 ++ +P P+P+ IV SK+D FQ+F+SEKR+ +C+ LRFLA+ YGA+L+ SS+ E Sbjct: 179 SLKMCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPK 238 Query: 236 KSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDL 295 ++ + AFGT P+ TD +KP+ + G DSL IG P A++ +G A +PF+L Sbjct: 239 LVKNMTSHFAFGTVCPQGYMTDHNKPMFVKCGFDSLESIGIPPASDNFMG---ASSPFNL 295 Query: 296 WKKVFEKVFPHES---TRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 W++ F ++P ++ E + +DP+ DP F EP ID++ K +EL + R + Sbjct: 296 WRESFISLWPQKTGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKELKNHIRSK 350 >gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 3 [Canis familiaris] Length = 225 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 130/225 (57%), Positives = 167/225 (74%), Gaps = 3/225 (1%) Query: 135 MESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRELISPFPVPLLIVGS 192 ME+LL + ++ V+K+ L KT +Q++ + KD+PDREL+ PF +PL+I+GS Sbjct: 1 MENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIPLVIIGS 60 Query: 193 KFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 K+DIFQDFDSEKRKVICKTLRF+AH+YGASL+FTS KSE + K R INQLAFG ++ K Sbjct: 61 KYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKVRGVINQLAFGIDKSK 119 Query: 253 SISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRER 312 SI D +KPL I AG DSLSQIG P + DIG LHA +P DLWKKV+E+VFP +ST Sbjct: 120 SICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVFPPKSTNTL 179 Query: 313 KELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 K +KDP +DPQ++E +D +R QKDQEL+QYKR +KSWK + LD Sbjct: 180 KHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWKQIELD 224 >gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae str. PEST] gi|157018577|gb|EAA06916.4| AGAP000723-PA [Anopheles gambiae str. PEST] Length = 470 Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 119/352 (33%), Gaps = 54/352 (15%) Query: 11 DIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTL 70 +EV+++ + PS ++V +G A GKTT++ + + E K Sbjct: 1 SSILSEVQTQ-----------SNTKLPSNKSVLVLGDNASGKTTLIAKL-QGVEDPKKGS 48 Query: 71 ALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNA 130 LEY + + +W L G ++L++ + N V+L L ++ P + Sbjct: 49 GLEYAYIDVRDEYRDDVTRLSVWILDGDPGHNNLLKFALNEQNFPHTLVILTLSMTTPWS 108 Query: 131 LWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVL-------------------- 170 + ++ + + + + ++ + ++ + Sbjct: 109 WVDQLQHWMKILDDHIAGLKIDPEEKQQCQARLTTEWQNYCETIDDLDPGSPIKRTNRLP 168 Query: 171 -------HKDYPDRELISPFPVPLLIVGSKFDIFQ------DFDSEKRKVICKTLRFLAH 217 P+ L + + +++V +K D D+ E + + +R Sbjct: 169 SVDDELDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQWIRRFCL 228 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 YGASL +TS K + ++ +G + IPAG D++ +I Sbjct: 229 MYGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRTPALVVEKDAVLIPAGWDNMKKISI- 287 Query: 278 VATEVDIGTLHAKNPF-DLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPL 328 ++ + + + D+ + + E + +D Q Sbjct: 288 --LYENMQSCKPDDYYNDIIAQPPSRKTVSNRESEIQ-----TEDEQSFLAR 332 >gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melanogaster] gi|22946025|gb|AAF52775.2| CG3769-PA [Drosophila melanogaster] gi|66770889|gb|AAY54756.1| IP11319p [Drosophila melanogaster] Length = 368 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 113/347 (32%), Positives = 179/347 (51%), Gaps = 19/347 (5%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 + ++ ++ DIA R + + + E P +RT+ +GSK GKTT + +F +R Sbjct: 26 ESATPSIQDIAG-----RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 Query: 63 DET-AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 +E +PTLALEY+FGRR +P+ ++WELG + L+++P+ + L+V+L Sbjct: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELIS 181 +LDLS+P W +E R+ +++ + +QR + + D E + Sbjct: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR-EILEQRTVERVGQQNKDSEKLD 198 Query: 182 PFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFI 241 P P P++IVG K+D+F FD RK C+ LR +AH G +L+F S K R I Sbjct: 199 PLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI 258 Query: 242 NQLAFGTE--RPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKV 299 L FG+ +S D ++PL I G+DS S+IG A V+ + A ++ + Sbjct: 259 CHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQLQ 316 Query: 300 FEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 EK + KE DP KDP F E +ID IR+QK++EL R+ Sbjct: 317 LEKQ-------KLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRD 356 >gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella vectensis] gi|156225136|gb|EDO45956.1| predicted protein [Nematostella vectensis] Length = 422 Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats. Identities = 58/338 (17%), Positives = 120/338 (35%), Gaps = 40/338 (11%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKD 88 PS +++ +G+ GKTT++ + +++ LEYT+ Sbjct: 8 QSSASRKLPSHKSIILIGNDESGKTTLISKLRGKEDDISKGHGLEYTYLEVHDEEIDDYT 67 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 ++W L G L++ +T + + VV+V+D S+P A+ E++ S R + Sbjct: 68 RLNVWILDGDPRNKSLLKYALTPKHARDVLVVMVVDCSRPWAIMESLHSWTEILREHIHS 127 Query: 149 VCAALQKTGESRSGKQRVPRVL----------------------HKDYPDRELISPFPVP 186 + + ++ E + + + L+ +P Sbjct: 128 LKLSPKELNEMEEKIVQQFQDYTDTEEASDENRRRSGTKDEDKVVLPLEENVLVDNLGIP 187 Query: 187 LLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 ++++ +K D +DF E I + +R +GA+L +TS K + + Sbjct: 188 MIVLVTKTDCMLSLEKDRDFHDEHFDFIQQHIRRYCLKHGAALFYTSVKENKNCNLFLKY 247 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDL-WKKV 299 + +G + IP+G DS+ +IG + +H + FD K Sbjct: 248 VLHKIYGLPFKSPALVVDKDSVFIPSGWDSMKKIGI---LNEHLKNIHPDDSFDDHIIKP 304 Query: 300 FEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKD 337 + E ++ Q + QK+ Sbjct: 305 ALRKPLQEKEIT-------AEEEQAFLAKQQQLL-QKN 334 >gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974436|ref|XP_001184479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 483 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 60/373 (16%), Positives = 121/373 (32%), Gaps = 58/373 (15%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW E + + PS +++ +G GKTT+L R + Sbjct: 20 DDEPQNLWTSIL-----------SEVSSHSSSKLPSCKSILVLGEDETGKTTLLSRL-QG 67 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + +W L G DL++ +TADN+ + V++ Sbjct: 68 VEDPKKGYGLEYLYLDVRDEDRDDTTRCGVWILAGENEHEDLLRYALTADNLEHMLVIIA 127 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD--------- 173 +D+ +P + ++++ R V+ + +K E + + + Sbjct: 128 VDMCRPWNIMDSLQKWTQVIRRHVDSLRIPPEKLRELEQRLVQQFQAYTEPETGQDSSVT 187 Query: 174 ---------------------YPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRK 206 + L VP+++V +K D QD+ E Sbjct: 188 RRTSGVTKPTGAEDEEAVVLPLGETTLTHNLGVPIVVVVTKSDYVNTLEKEQDYSDEHLD 247 Query: 207 VICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA 266 + + +R YGA+L + S K ++ + + L +P+ Sbjct: 248 FLQQNVRKFCLNYGAALFYVSVKENKNCDLLNRYLLHRLYDFPFNSAALVVEKDALFVPS 307 Query: 267 GSDSLSQIGPPVATEVDIGTLHAKNPFDL-WKKVFEKVFPHESTRERKELKDPVKDPQFS 325 G D+L ++ ++ + + P+D K + + + +D Q Sbjct: 308 GWDNLQKVSI---LYENMANIDPEKPYDEVIIKPVVRRLLQD------NKEIIAEDEQVF 358 Query: 326 EPLIDSIRAQKDQ 338 + Q Sbjct: 359 LMKQQATIRNAAQ 371 >gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chain [Rattus norvegicus] gi|50927372|gb|AAH79201.1| Dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 311 Score = 243 bits (622), Expect = 9e-63, Method: Composition-based stats. Identities = 152/253 (60%), Positives = 187/253 (73%), Gaps = 11/253 (4%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 MP S+TLW+IA AEV R + + E +++VFF+GSK GGKTTI+LR L Sbjct: 1 MP---SETLWEIAKAEVEKRRCHGSDGDGME-----IGEKSVFFIGSKNGGKTTIILRCL 52 Query: 61 ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 +RDE AKPTLALEYT+GR+ +GHNTPKDIAH WELGGG SL DL+ IPIT D + S+V Sbjct: 53 DRDEPAKPTLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIV 112 Query: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR--SGKQRVPRVLHKDYPDRE 178 LVLDLSKPN LW TME+LL + ++ V+KV L K +QR+ V+ KD+PDRE Sbjct: 113 LVLDLSKPNDLWPTMENLLQATKSHVDKVTMKLGKANSKASSEMRQRMWSVMQKDHPDRE 172 Query: 179 LISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSR 238 LI PFP+PL+I+GSK+DIFQDFD EKRKVICKTLRF+AH+YGASL+FTS KSE + K R Sbjct: 173 LIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTS-KSEALLLKMR 231 Query: 239 SFINQLAFGTERP 251 INQLAFG ++ Sbjct: 232 GVINQLAFGIDKR 244 >gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] Length = 358 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 109/323 (33%), Positives = 168/323 (52%), Gaps = 14/323 (4%) Query: 27 EEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET-AKPTLALEYTFGRRARGHNT 85 + E P +RT+ +GSK GKTT + +F +R+E +PTLALEY+FGRR + Sbjct: 35 LLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS 94 Query: 86 PKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 P+ ++WELG + L+++P+ + L+V+L+LDLS+P W +E R+ Sbjct: 95 PQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDT 153 Query: 146 VEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKR 205 +++ + +QR + + D E + P P P++IVG K+D+F FD R Sbjct: 154 AQQMMEKVTPELR-EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIR 212 Query: 206 KVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTE--RPKSISTDPSKPLA 263 K C+ LR +AH G +L+F S K R I L FG+ +S D ++PL Sbjct: 213 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 272 Query: 264 IPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQ 323 I G+DS S+IG A V+ + A ++ + EK + KE DP KDP Sbjct: 273 IWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQLQLEKQ-------KLKETTDPAKDPG 323 Query: 324 FSEPLIDSIRAQKDQELDQYKRE 346 F E +ID IR+QK++EL R+ Sbjct: 324 FKELVIDEIRSQKNEELAGLMRD 346 >gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] gi|39583371|emb|CAE66345.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] Length = 366 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 111/355 (31%), Positives = 195/355 (54%), Gaps = 25/355 (7%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHF------------PSQRTVFFMGSKAGGKTTI 55 +WD+A ++ + R E E + +D + + + G++ I Sbjct: 2 NIWDLAKQKLVENKQRAAELEQKLDDENGAVNDNYLAEVRRRHESHIIIAGNRQI----I 57 Query: 56 LLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVS 115 + E + LE+T+ RR RG KD+A+LWELGGG S+++L+ +PITA NV Sbjct: 58 IHVEFSGAERRFERIGLEFTYARRTRG--NVKDVANLWELGGGSSVTELLSVPITAKNVE 115 Query: 116 FLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYP 175 S++++LD++ + +W T+E + + R V + ++R ++ R+ + Sbjct: 116 TCSLIVLLDMTNLSEMWITIEKTVDTVRRLV-ENLERQDANLQTRMAEKSRLRLEKYESS 174 Query: 176 DRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMS 235 ++ +P P+P+ IV +K+D FQ+F+SEKR+ +C+ LRFLA+ YGA+L+ SS+ E Sbjct: 175 SLKMCAPCPLPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPK 234 Query: 236 KSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDL 295 ++ I+ AFGT P+ TD +KP+ I G D+L IG P ++ +G A +PF+L Sbjct: 235 LVKNMISHFAFGTVCPQGYITDHNKPMFIKCGFDNLEAIGIPPGSDNFMG---ASSPFNL 291 Query: 296 WKKVFEKVFPHESTR---ERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQ 347 W++ F ++P ++ E + +DP+ DP F EP ID++ K +EL+ + R + Sbjct: 292 WRESFISLWPQKTGNVDVEDTKKQDPMIDPVFKEPSIDNLVEIKRKELENHIRSK 346 >gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 233 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 113/214 (52%), Positives = 147/214 (68%), Gaps = 1/214 (0%) Query: 144 NQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSE 203 ++ C+ L + + DRELI PFP+PL+I+GSK+DIFQDFD E Sbjct: 20 QHAKRHCSLLGTGWRNLLAGLNQHTNHSRHLKDRELIDPFPIPLVIIGSKYDIFQDFDPE 79 Query: 204 KRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLA 263 KRKVICKTLRF+AH+YGASL+FTS KSE + K R INQLAFG ++ KSI D +KPL Sbjct: 80 KRKVICKTLRFVAHYYGASLMFTS-KSEALLLKIRGVINQLAFGIDKSKSICVDQNKPLF 138 Query: 264 IPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQ 323 I AG DSL QIG P + DIG L A +P +LWKKV++K+FP +ST K ++DP +DPQ Sbjct: 139 ITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLFPPKSTGTLKAVQDPARDPQ 198 Query: 324 FSEPLIDSIRAQKDQELDQYKREQAKSWKSLALD 357 ++E +D +R QKDQEL+ YKR +K+WK + LD Sbjct: 199 YAESEVDEMRVQKDQELEHYKRSSSKTWKQIELD 232 >gi|149692307|ref|XP_001496560.1| PREDICTED: similar to rab11 [Equus caballus] Length = 255 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 49/280 (17%), Positives = 83/280 (29%), Gaps = 52/280 (18%) Query: 9 LWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--A 66 LW AE S S + +G GK+ +L RF + + Sbjct: 20 LWQGKNAEWTFLPSDQSAVFTSLSTPTPISSLVIVLIGDSGVGKSNLLSRFTRNEFNLES 79 Query: 67 KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLS 126 K T+ +E+ A +W+ G + + +LV D++ Sbjct: 80 KSTIGVEFATRSIQVD--GKTIKAQIWDTAGQERYRAITSAYYRGA----VGALLVYDIA 133 Query: 127 KPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVP 186 K +E +E L R+ + Sbjct: 134 KHLT-YENVERWLKELRDHADSNIV----------------------------------- 157 Query: 187 LLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 +++VG+K D+ R V R A G S I TS+ T + + I + Sbjct: 158 IMLVGNKSDLRH-----LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 212 Query: 247 GTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGT 286 K +S D + P+ ++ I P TE Sbjct: 213 RIVSQKQMS-DRRENDMSPSN--NVVPIHVPPTTENKPKV 249 >gi|114675154|ref|XP_001147785.1| PREDICTED: similar to GTP-binding protein RAB11B [Pan troglodytes] Length = 348 Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 138 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 195 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 196 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 248 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 249 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 270 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 271 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVD 327 Query: 274 IGPPVATE 281 I P T+ Sbjct: 328 ISVPPTTD 335 >gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, member RAS oncogene family [Macaca mulatta] Length = 304 Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 78/253 (30%), Gaps = 52/253 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 96 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 153 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 154 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 206 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 207 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 228 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + K +S D + P+ ++ Sbjct: 229 AFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVP 285 Query: 274 IGPPVATEVDIGT 286 I P TE Sbjct: 286 IHVPPTTENKPKV 298 >gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Trypanosoma brucei TREU927] gi|70835124|gb|EAN80626.1| dynein light intermediate chain, putative [Trypanosoma brucei] Length = 418 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 91/375 (24%), Positives = 161/375 (42%), Gaps = 39/375 (10%) Query: 3 KVSSDTLWDIAAAE-VRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL- 60 ++ D D+ + ++E+ + S+ +F +G GKT+++ R Sbjct: 57 QIVVDPTKDLWQNIALNTKENNLPQ-----------SEANLFVVGCSGAGKTSVIQRVCS 105 Query: 61 ----------ERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPIT 110 + KPT AL+Y + R+ H WEL G+ LS L ++ IT Sbjct: 106 AIGAGGNTSGKGKTKVKPTTALDYQYTTRS--DRHVSQTVHFWELAQGMELSQLCEVVIT 163 Query: 111 ADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKT--GESRSGKQRVPR 168 +NV + + +V+D S P+++W+T+ L + ++ ++ R R Sbjct: 164 PENVHLMHIAIVVDFSDPSSMWDTLAYWLKRVDRRANEILQKMRAKGSNTPDKLHARAQR 223 Query: 169 VLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSS 228 L + +PD + + +P +IV +K D F E+ K + + LRF+AH YGA L+F+S Sbjct: 224 ALGEGHPDLKRVRLSGLPTVIVCNKVDAFPG-PMEQMKTLTRCLRFIAHLYGAYLVFSSD 282 Query: 229 KSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPV-ATEVDIG-- 285 + + + L R + + I +D+ IG P G Sbjct: 283 ADSAKLRLLLNHLLFLTPFDARQVELDV-ERGTILIMPENDTFVDIGDPPLCDGPSGGPV 341 Query: 286 -TLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVK------DPQFSEPLIDSIRAQKDQ 338 + D WK + +FP ++ R + +K + F EP ID+IR QKD+ Sbjct: 342 TQSTGDSELDRWKVPLDAMFPPKAGGGRAQSDAMLKRLYDMGEGGFGEPTIDTIRRQKDE 401 Query: 339 ELDQYKREQAKSWKS 353 EL+QY++ A+ K Sbjct: 402 ELEQYRKSAARRDKG 416 >gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoobscura] gi|54645577|gb|EAL34315.1| GA17674-PA [Drosophila pseudoobscura] Length = 368 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 106/349 (30%), Positives = 177/349 (50%), Gaps = 22/349 (6%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 ++ ++ DIA R + + + E P +RT+ +GSK GK+T + +F +R Sbjct: 26 DNATPSIQDIAG-----RLAEEQQRLRQLEATSMPKERTLLVLGSKCVGKSTAINKFFDR 80 Query: 63 DETA-KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVL 121 +E +PTLALEY+FGRR +P+ I ++WELG + L+++P+ + L+V + Sbjct: 81 EEHTTRPTLALEYSFGRRIGSGRSPQVI-NVWELGSLDNADQLLEVPMRTHGLQQLAVFI 139 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELIS 181 ++DLS+P W +E R +++ A + ++ + RV H++ D + Sbjct: 140 MVDLSQPQRFWTDLECAYKGLRVTSQELLARMTPELRETLEQRTLERVGHQNKEDLGTLE 199 Query: 182 PFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFI 241 P P++IVG K+D+F D +K IC+ LR +AH G +L+F S K R I Sbjct: 200 LLPFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGALLFYSQKVPKLSKVLRDTI 259 Query: 242 NQLAFGTER--PKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKV 299 + + FG+ +S TD ++PL++ G+DS S+IG A + Sbjct: 260 SHMGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDTGAQS-----------VERIGAT 308 Query: 300 FEKVFP--HESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 F P + ++ +DP KDP F E LID +RAQK++EL R+ Sbjct: 309 FGVAVPQLQLEKQLQQVPQDPAKDPGFKESLIDEMRAQKNEELATIMRD 357 >gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 446 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 60/339 (17%), Positives = 101/339 (29%), Gaps = 80/339 (23%) Query: 3 KVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLER 62 LW +EV +R + P+ + V +G GKT+++ R ++ Sbjct: 42 DEDGQNLWSCILSEVSTR-----------SRSKLPAGKNVLLLGEDGAGKTSLI-RKIQG 89 Query: 63 DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLV 122 E K LEY + + P + Sbjct: 90 IEEYKKGRGLEYLYLNVHDEDRDV-IR------DFQEYVEPGEDFPASPQ---------- 132 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISP 182 + N + ++ + L Sbjct: 133 ----RRNT------------------------------ASQEDKDDSVVLPLGADTLTHN 158 Query: 183 FPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSK 236 +P+L+V +K D D+ E I +R YGA+LI+TS K + Sbjct: 159 LGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDL 218 Query: 237 SRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPF-DL 295 +I Q +G + IPAG D+ +IG + TL A++ F D+ Sbjct: 219 VYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKIGI---LHENFQTLKAEDNFEDI 275 Query: 296 WKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRA 334 K + F HE +D Q + S+ A Sbjct: 276 ITKPPVRKFVHEKEI-------MAEDDQVFLMKLQSLLA 307 >gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa] Length = 203 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 29/244 (11%), Positives = 69/244 (28%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ + + V +T Sbjct: 116 KLLVGN-----------------------------------KCDLTAN-----KVVSYET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + + + P G Sbjct: 136 AKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNNARPPTVQIRGQPVN 195 Query: 272 SQIG 275 + G Sbjct: 196 QKSG 199 >gi|5902803|sp|P28188|ARA5_ARATH Ras-related protein ARA-5 gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana] Length = 258 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 77/270 (28%), Gaps = 55/270 (20%) Query: 14 AAEVRSRESR------TDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ET 65 +E R R+ + ++ + + + +G GK+ +LLRF + E+ Sbjct: 32 KSEKRERDLWLCIARCSSSHRSKTMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVES 91 Query: 66 AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDL 125 T+ +++ R + +W+ G + + +++V D+ Sbjct: 92 YISTIGVDF--KIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAH----GIIIVYDV 145 Query: 126 SKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPV 185 + + ++ L L Sbjct: 146 TDEESF-NNVKQWLSEIDRYASDNVNKLLVGN---------------------------- 176 Query: 186 PLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLA 245 K D+ E R + +T + A G + TS+K T + ++ ++ Sbjct: 177 -------KSDLT-----ENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASI 224 Query: 246 FGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 + + P G + G Sbjct: 225 KERMASQPAGNNARPPTVQIRGQPVAQKNG 254 >gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966] Length = 213 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 80/261 (30%), Gaps = 54/261 (20%) Query: 31 EEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKD 88 ++++ V +G GK+ +L RF + ++ T+ +E+ Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVD--GKTI 59 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 A +W+ G + + +LV D++K + + L R+ + Sbjct: 60 KAQIWDTAGQERYRAITSAYYRGA----VGALLVYDIAKHSTYVN-VSRWLKELRDHADS 114 Query: 149 VCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVI 208 + VG+K D+ R V Sbjct: 115 NIVVML-----------------------------------VGNKSDLRH-----LRAVP 134 Query: 209 CKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 + + A S I TS+ + + ++ I + K++ + + P+G Sbjct: 135 TEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSSDD--VIKPSGG 192 Query: 269 DSLSQIGPPVATEVDIGTLHA 289 ++ I +T+ T Sbjct: 193 ET---ISVQPSTDDGGQTKKG 210 >gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus] Length = 216 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 78/253 (30%), Gaps = 52/253 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + K +S D + P+ ++ Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHMS-DRRENDMSPSN--NVVP 197 Query: 274 IGPPVATEVDIGT 286 I P TE Sbjct: 198 IHVPPTTENKPKV 210 >gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis] gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis] Length = 202 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 29/244 (11%), Positives = 68/244 (27%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L +K D+ + R V T Sbjct: 116 KLLVG-----------------------------------NKCDLTAN-----RAVDYDT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + + G + Sbjct: 136 AKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNSSRPATVQMKGQPVV 195 Query: 272 SQIG 275 + G Sbjct: 196 QKSG 199 >gi|157328625|emb|CAO22323.1| unnamed protein product [Vitis vinifera] Length = 203 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 29/244 (11%), Positives = 68/244 (27%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ + + V +T Sbjct: 116 KLLVGN-----------------------------------KCDLTAN-----KVVSYET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + + P G Sbjct: 136 AKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNTARPPTVQIRGQPVN 195 Query: 272 SQIG 275 + G Sbjct: 196 QKSG 199 >gi|149426497|ref|XP_001518037.1| PREDICTED: similar to rab11, partial [Ornithorhynchus anatinus] Length = 331 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 77/247 (31%), Gaps = 52/247 (21%) Query: 42 VFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGI 99 + +G GK+ +L RF + +K T+ +E+ A +W+ G Sbjct: 129 LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIWDTAGQE 186 Query: 100 SLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGES 159 + + +LV D++K +E +E L R+ + Sbjct: 187 RYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-------- 233 Query: 160 RSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFY 219 +++VG+K D+ R V R A Sbjct: 234 ---------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAEKN 261 Query: 220 GASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVA 279 G S I TS+ T + + I + K +S D + P+ ++ I P Sbjct: 262 GLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVPIHVPPT 318 Query: 280 TEVDIGT 286 TE Sbjct: 319 TENKPKV 325 >gi|73987203|ref|XP_854399.1| PREDICTED: similar to RAB11B, member RAS oncogene family [Canis familiaris] Length = 410 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 78/255 (30%), Gaps = 57/255 (22%) Query: 34 AHFPSQRT-----VFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTP 86 P + + +G GK+ +L RF + +K T+ +E+ Sbjct: 193 KRQPREVKTYLLRLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GK 250 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 A +W+ G + + +LV D++K +E +E L R+ Sbjct: 251 TIKAQIWDTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHA 305 Query: 147 EKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRK 206 + +++VG+K D+ R Sbjct: 306 DSNIV-----------------------------------IMLVGNKSDLRH-----LRA 325 Query: 207 VICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA 266 V R A S I TS+ T + ++ I + K I+ + + Sbjct: 326 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDES 382 Query: 267 GSDSLSQIGPPVATE 281 +++ I P T+ Sbjct: 383 PGNNVVDISVPPTTD 397 >gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos] Length = 216 Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 77/252 (30%), Gaps = 52/252 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + K +S D + P+ ++ Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVP 197 Query: 274 IGPPVATEVDIG 285 I P T Sbjct: 198 IHVPPTTGNKPK 209 >gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic construct] gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct] gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct] gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct] gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct] gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct] Length = 217 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 78/253 (30%), Gaps = 52/253 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + K +S D + P+ ++ Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVP 197 Query: 274 IGPPVATEVDIGT 286 I P TE Sbjct: 198 IHVPPTTENKPKV 210 >gi|84000297|ref|NP_001033251.1| hypothetical protein LOC534708 [Bos taurus] gi|116255983|sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A gi|83405346|gb|AAI11144.1| Similar to RAB11a, member RAS oncogene family [Bos taurus] Length = 216 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 78/253 (30%), Gaps = 52/253 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + K +S D + P+ ++ Sbjct: 141 AFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVP 197 Query: 274 IGPPVATEVDIGT 286 I P TE Sbjct: 198 IHVPPTTENKPKV 210 >gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia] Length = 203 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 67/244 (27%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLSEIDRYASDSVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + ++ V +T Sbjct: 116 KLLVGNKCDLT----------------------------------------AQKVVSTET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + + S + P G Sbjct: 136 AQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVN 195 Query: 272 SQIG 275 + G Sbjct: 196 QKSG 199 >gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] Length = 218 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K + +P + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMV---DRPGHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|4758984|ref|NP_004654.1| Ras-related protein Rab-11A [Homo sapiens] gi|13592148|ref|NP_112414.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|31980840|ref|NP_059078.2| RAB11a, member RAS oncogene family [Mus musculus] gi|54792725|ref|NP_001003276.1| Ras-related protein Rab-11A [Canis lupus familiaris] gi|72535192|ref|NP_001026958.1| Ras-related protein Rab-11A [Sus scrofa] gi|126722661|ref|NP_001075720.1| tubulovesicle-associated protein [Oryctolagus cuniculus] gi|73999640|ref|XP_855589.1| PREDICTED: rab11 GTP-binding protein [Canis familiaris] gi|114657631|ref|XP_510490.2| PREDICTED: similar to rab11 [Pan troglodytes] gi|126277069|ref|XP_001367185.1| PREDICTED: similar to rab11 [Monodelphis domestica] gi|50402540|sp|P62494|RB11A_RAT Ras-related protein Rab-11A (Rab-11) (24KG) gi|50402541|sp|P62490|RB11A_CANFA Ras-related protein Rab-11A (Rab-11) gi|50402542|sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A (Rab-11) (YL8) gi|50402543|sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A (Rab-11) gi|50402544|sp|P62493|RB11A_RABIT Ras-related protein Rab-11A (Rab-11) gi|75056558|sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A gi|75070685|sp|Q5R9M7|RB11A_PONPY Ras-related protein Rab-11A gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens] gi|917|emb|CAA39799.1| rab11 [Canis familiaris] gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens] gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein gi|310067|gb|AAA31491.1| tubulovesicle-associated protein gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens] gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens] gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus] gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus] gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens] gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens] gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens] gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens] gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens] gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo pygmaeus] gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct] gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct] gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa] gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus] gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus] gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus] gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus] gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct] gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct] gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus] gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|1089909|prf||2018147A GTP-binding protein rab11 Length = 216 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 78/253 (30%), Gaps = 52/253 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + K +S D + P+ ++ Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVP 197 Query: 274 IGPPVATEVDIGT 286 I P TE Sbjct: 198 IHVPPTTENKPKV 210 >gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis] gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis] Length = 205 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 72/261 (27%), Gaps = 60/261 (22%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D++ + ++ L Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYAC 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L K D+ K+ V Sbjct: 115 ENVNKLLVGN-----------------------------------KCDLTT-----KKVV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 T + A G + TS+K+ T + ++ + P P G Sbjct: 135 DFTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPSPA----------PQG 184 Query: 268 SDSLSQIG-PPVATEVDIGTL 287 + S +I + G Sbjct: 185 AGSNVKINSSTPVKQGGGGCC 205 >gi|57524801|ref|NP_001005827.1| Ras-related protein Rab-11A [Gallus gallus] gi|82233797|sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A gi|53133464|emb|CAG32061.1| hypothetical protein [Gallus gallus] Length = 216 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 44/252 (17%), Positives = 78/252 (30%), Gaps = 52/252 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + K +S D + P+ ++ Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMS-DRRENDMSPSN--NVVP 197 Query: 274 IGPPVATEVDIG 285 I P TE Sbjct: 198 IHVPPTTENKPK 209 >gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis] Length = 202 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 70/244 (28%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVELDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L +VG+K D+ K+ V +T Sbjct: 116 KL-----------------------------------LVGNKNDLT-----AKKVVDYQT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ + + + + G + Sbjct: 136 AKAFADEIGIPFLETSAKNAINVEDAFMTMAAEIKNRMASQPAMNSTRPTTVQMKGQPVV 195 Query: 272 SQIG 275 + G Sbjct: 196 PKSG 199 >gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa] Length = 203 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 28/245 (11%), Positives = 69/245 (28%), Gaps = 49/245 (20%) Query: 33 DAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIA 90 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 TPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTIKL 59 Query: 91 HLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVC 150 +W+ G + + +++V D++ + ++ L + Sbjct: 60 QIWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDQESF-NNVKQWLNEIDRYASENV 114 Query: 151 AALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICK 210 L +K D+ + + V + Sbjct: 115 NKLLVG-----------------------------------NKSDLTAN-----KVVSYE 134 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 T + A G + TS+K+ + ++ + + + + P G Sbjct: 135 TAKAFADEIGIPFMETSAKNAINVEQAFMAMAADIKNRMASQPAANNARPPTVQIRGQPV 194 Query: 271 LSQIG 275 G Sbjct: 195 NQNTG 199 >gi|157341762|emb|CAO62317.1| unnamed protein product [Vitis vinifera] Length = 203 Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 69/244 (28%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + ++ T+ +++ R + Sbjct: 3 QEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDQESF-NNVKQWLNEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ + + V +T Sbjct: 116 KLLVGN-----------------------------------KCDLTAN-----KVVSYET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + + + P G Sbjct: 136 AKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKTRMASQPAMNNARPPSVQLQGQPVN 195 Query: 272 SQIG 275 + G Sbjct: 196 QKSG 199 >gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00000012631 [Nasonia vitripennis] Length = 357 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 101/349 (28%), Positives = 177/349 (50%), Gaps = 22/349 (6%) Query: 8 TLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK 67 T D A + D + D ++++ +GS+ GKTT++ RFLE+++T K Sbjct: 6 TNQDNARELALQASIQEDT--QRKTDPEESHEKSLIILGSREVGKTTMIYRFLEKEDTPK 63 Query: 68 PTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITA----DNVSFLSVVLVL 123 PTLA++Y++GR+A G + KD+ H+WE+G L+ + + +V+++L Sbjct: 64 PTLAMDYSYGRKA-GKSLVKDVVHVWEVGHLA--PSLISGSMRGCTLSHSAHHTTVLIML 120 Query: 124 DLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRE--LIS 181 DL KP+ LW ++E L + R + + + R K R R K + E + Sbjct: 121 DLGKPDVLWNSLEECLVAVRA-AMMMSYQQELVHDLRERKIRYLRERAKPGTEDEPPVDD 179 Query: 182 PFPVPLLIVGSKFDIFQDFDS-EKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 PFP+ L ++G K+D F++ S + ++ I + LR AH GA L + S+K + +++ Sbjct: 180 PFPMRLCLIGGKYDEFRELHSGDDKESIGQALRAAAHVLGAGLHYHSAKDSHLLRRTKEL 239 Query: 241 INQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVF 300 ++ F + K+ TD KPL++ AGSDS S I + D D K+++ Sbjct: 240 LSHYGFKGQSTKASVTDYDKPLSVAAGSDSFSAIDLK-ISRNDYAVT-----LDEIKQIY 293 Query: 301 EKVFPHESTRER---KELKDPVKDPQFSEPLIDSIRAQKDQELDQYKRE 346 + FP + ++ DP DP F+EP++D +R Q++QE+ R+ Sbjct: 294 VRRFPQVPKNQDVLPGDMDDPANDPNFNEPIVDRLRLQREQEISVLLRD 342 >gi|6679583|ref|NP_033023.1| RAB11B, member RAS oncogene family [Mus musculus] gi|1172815|sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B gi|433064|gb|AAC42093.1| Rab11b gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus] gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus] gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus] gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus] gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus] gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus] gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus] gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus] gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus] gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus] gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus] gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus] Length = 218 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens] Length = 218 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum] Length = 203 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 69/238 (28%), Gaps = 49/238 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLSEIDRYASDGVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 ++VG+K D+ + R V +T Sbjct: 116 K-----------------------------------ILVGNKSDLTAN-----RVVSYET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 + A G + TS+K T + ++ + + + P G Sbjct: 136 AKAFADEIGIPFLETSAKDATNVEQAFMAMTSAIKNRMASQPANNSAKPPTVNIRGQP 193 >gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521] gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521] Length = 213 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 80/260 (30%), Gaps = 54/260 (20%) Query: 31 EEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKD 88 ++++ V +G GK+ +L RF + + +K T+ +E+ + Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVD--GKTV 59 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 A +W+ G + + +LV D++K + L R+ + Sbjct: 60 KAQIWDTAGQERYRAITSAYYRGA----VGALLVYDIAKHPTYVN-VSRWLKELRDHADS 114 Query: 149 VCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVI 208 + VG+K D+ R V Sbjct: 115 NIVIML-----------------------------------VGNKSDLRH-----LRAVP 134 Query: 209 CKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 + + A S I TS+ + + ++ I + K++ + + P+G Sbjct: 135 TEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDD--VIKPSGG 192 Query: 269 DSLSQIGPPVATEVDIGTLH 288 ++ I + + T Sbjct: 193 ET---ITVQPSADDGGQTKK 209 >gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980] gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980] Length = 213 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 73/256 (28%), Gaps = 53/256 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDA--KTIKAQIW 63 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+SK +E + L R+ + + Sbjct: 64 DTAGQERYRAITSAYYRGA----VGALLVYDISKHQT-YENVTRWLKELRDHADSNIVIM 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 VG+K D+ R V + + Sbjct: 119 L-----------------------------------VGNKSDLRH-----LRAVPTEEAK 138 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ + + + I + K++ S I +G++ Sbjct: 139 QFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGDSAQATIGSGTN---- 194 Query: 274 IGPPVATEVDIGTLHA 289 I + Sbjct: 195 ITLTPPPSDEAAKGGG 210 >gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Danio rerio] gi|29294722|gb|AAH48889.1| Zgc:55760 [Danio rerio] Length = 218 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K + +P + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMV---DRPGHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis] gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis] Length = 216 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 38/250 (15%), Positives = 74/250 (29%), Gaps = 49/250 (19%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + + +K T+ +E+ A +W Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVD--GKMIKAQIW 66 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+++ E +E L R+ E Sbjct: 67 DTAGQERYRAITSAYYRGA----VGALLVYDITRHVTF-ENVERWLKELRDHTEHNIV-- 119 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + + Sbjct: 120 ---------------------------------VMLVGNKSDLRH-----LRAVSTEDAQ 141 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G I TS+ T + + + + K++ A P G + Sbjct: 142 TFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKKALDVSEDNAAAPPQGQTINVK 201 Query: 274 IGPPVATEVD 283 +V Sbjct: 202 DDVTATKKVG 211 >gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus] Length = 218 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|14249144|ref|NP_116006.1| RAB11B, member RAS oncogene family [Rattus norvegicus] gi|78369332|ref|NP_001030468.1| RAB11A, member RAS oncogene family [Bos taurus] gi|109123235|ref|XP_001093925.1| PREDICTED: RAB11B, member RAS oncogene family [Macaca mulatta] gi|38258938|sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B (GTP-binding protein YPT3) gi|50403673|sp|O35509|RB11B_RAT Ras-related protein Rab-11B gi|108860922|sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus] gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens] gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus] gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct] gi|75773827|gb|AAI05163.1| RAB11A, member RAS oncogene family [Bos taurus] gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis] gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus] Length = 218 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis] Length = 218 Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 78/252 (30%), Gaps = 52/252 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---ERSAHDESPGNNVVD 197 Query: 274 IGPPVATEVDIG 285 I P T+ G Sbjct: 198 ISVPPTTDSQRG 209 >gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus] Length = 202 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 27/244 (11%), Positives = 69/244 (28%), Gaps = 50/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + ++ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + E + V +T Sbjct: 116 KLLVGNKCDLT----------------------------------------ENKVVSYET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + + ++ + I G Sbjct: 136 AKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNNARPPTVQI-RGQPVN 194 Query: 272 SQIG 275 + G Sbjct: 195 QKSG 198 >gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus] Length = 218 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries] Length = 208 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 75/252 (29%), Gaps = 52/252 (20%) Query: 37 PSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWE 94 V +G GK+ +L RF + +K T+ +E+ A +W+ Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIWD 58 Query: 95 LGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQ 154 G + + +LV D++K +E +E L R+ + Sbjct: 59 TAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV--- 110 Query: 155 KTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRF 214 +++VG+K D+ R V R Sbjct: 111 --------------------------------IMLVGNKSDLRHF-----RAVPTDEARA 133 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 A G S I T + T + + I + K +S + S+++ I Sbjct: 134 FAEKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQMSDRRENDMFP---SNNVVPI 190 Query: 275 GPPVATEVDIGT 286 P TE Sbjct: 191 HVPPTTENKPKV 202 >gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10] gi|150854657|gb|EDN29849.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10] Length = 213 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 73/256 (28%), Gaps = 53/256 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDA--KTIKAQIW 63 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+SK +E + L R+ + + Sbjct: 64 DTAGQERYRAITSAYYRGA----VGALLVYDISKHQT-YENVTRWLKELRDHADSNIVIM 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 VG+K D+ R V + + Sbjct: 119 L-----------------------------------VGNKSDLRH-----LRAVPTEEAK 138 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ + + + I + K++ S I +G++ Sbjct: 139 QFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGDSAQATIASGTN---- 194 Query: 274 IGPPVATEVDIGTLHA 289 I + Sbjct: 195 ITLTPPPSDEAAKGGG 210 >gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase Length = 199 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 59 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 60 DTAGQERYRRITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 112 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 113 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 134 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 135 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVD 191 Query: 274 IGPPVATE 281 I P T+ Sbjct: 192 ISVPPTTD 199 >gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|148237448|ref|NP_001087959.1| hypothetical protein LOC494642 [Xenopus laevis] gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis] gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] Length = 218 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 79/260 (30%), Gaps = 52/260 (20%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPK 87 D + V +G GK+ +L RF + +K T+ +E+ Sbjct: 2 GARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 A +W+ G + + +LV D++K +E +E L R+ + Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHAD 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 +++VG+K D+ R V Sbjct: 115 NNIV-----------------------------------IMLVGNKSDLRH-----LRAV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 R A S I TS+ T + ++ I + K I+ + + Sbjct: 135 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRSAHDESP 191 Query: 268 SDSLSQIGPPVATEVDIGTL 287 +++ I P T+ + Sbjct: 192 GNNVVDISVPPTTDGQKSSK 211 >gi|15233873|ref|NP_193578.1| AtRABA1e (Arabidopsis Rab GTPase homolog A1e); GTP binding [Arabidopsis thaliana] gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis thaliana] gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis thaliana] gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana] gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana] Length = 217 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 78/252 (30%), Gaps = 52/252 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + + +G GK+ +L RF + + +K T+ +E+ A LW Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVD--EKIIKAQLW 67 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+++ E +E L R+ + Sbjct: 68 DTAGQERYRAITSAYYRGA----VGALLVYDITRHITF-ENVERWLKELRDHTDANVV-- 120 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + R Sbjct: 121 ---------------------------------IMLVGNKADLRH-----LRAVPTEEAR 142 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS--DSL 271 + + TS+ T + ++ + + + K++ P+++P G D Sbjct: 143 SFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALD-GTGDPMSLPKGQTIDIG 201 Query: 272 SQIGPPVATEVD 283 ++ Sbjct: 202 NKDDVTAVKSSG 213 >gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var. neoformans B-3501A] Length = 213 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 77/261 (29%), Gaps = 54/261 (20%) Query: 31 EEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKD 88 + +++ V +G GK+ +L RF + +K T+ +E+ Sbjct: 2 TDGSNYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVD--GKTV 59 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 A +W+ G + + +LV D++K +E + L R+ + Sbjct: 60 KAQIWDTAGQERYRAITSAYYRGA----VGALLVYDIAKHQT-YENVTRWLKELRDHADA 114 Query: 149 VCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVI 208 + G+K D+ R V Sbjct: 115 NIVIMLV-----------------------------------GNKSDLKH-----LRAVS 134 Query: 209 CKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 + A G S I TS+ + + + I + KS+ + + P+G Sbjct: 135 TDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD--VIKPSGG 192 Query: 269 DSLSQIGPPVATEVDIGTLHA 289 ++ I + + Sbjct: 193 ET---ILVAPTADDGGAKSGS 210 >gi|4758986|ref|NP_004209.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens] Length = 218 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRRITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|466172|sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 gi|287835|emb|CAA44919.1| yptm2 [Zea mays] Length = 203 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 28/242 (11%), Positives = 71/242 (29%), Gaps = 49/242 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + ++ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDQESF-NNVKQWLNEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L +VG+K D+ + + V +T Sbjct: 116 KL-----------------------------------LVGNKSDLTAN-----KVVATET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + + + + G Sbjct: 136 AKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPATVQIRGQPVN 195 Query: 272 SQ 273 + Sbjct: 196 QK 197 >gi|116498990|gb|EAU81885.1| hypothetical protein CC1G_06096 [Coprinopsis cinerea okayama7#130] Length = 209 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 71/260 (27%), Gaps = 56/260 (21%) Query: 31 EEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKD 88 E +++ V +G GK+ +L RF + +K T+ +E+ Sbjct: 2 AEGSNYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVD--GKTV 59 Query: 89 IAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEK 148 A +W+ G + + +LV D++K + L R+ + Sbjct: 60 KAQIWDTAGQERYRAITSAYYRGA----VGALLVYDIAKHATYVN-VTRWLKELRDHADS 114 Query: 149 VCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVI 208 + VG+K D+ R V Sbjct: 115 NIVIML-----------------------------------VGNKSDLKH-----LRAVP 134 Query: 209 CKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 + A G S I TS+ + + + I + KS+ + + G Sbjct: 135 TDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLESSSTNIEPPTQG- 193 Query: 269 DSLSQIGPP-VATEVDIGTL 287 I G Sbjct: 194 -----ISVTAPEPADKGGKC 208 >gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum] Length = 203 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 31/238 (13%), Positives = 69/238 (28%), Gaps = 49/238 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDF--KIRTVEQDGKTIKLR 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLSEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 ++VG+K D+ + R V +T Sbjct: 116 K-----------------------------------ILVGNKADLTAN-----RVVSYET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 + A G + TS+K T + ++ + + S P G Sbjct: 136 AKAFADEIGIPFLETSAKDATNVEQAFMAMTGAIKNRMASQPASNSAKPPTVNIRGQP 193 >gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis] Length = 217 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 45/252 (17%), Positives = 79/252 (31%), Gaps = 52/252 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K IS D S P +++ Sbjct: 141 AFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIS-DRSGHEESP--GNNVVD 197 Query: 274 IGPPVATEVDIG 285 I P T+ G Sbjct: 198 ISLPPTTDSQRG 209 >gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens] Length = 218 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSDIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|131849|sp|P22129|RB11B_DISOM Ras-related protein Rab-11B (ORA3) gi|213121|gb|AAA49233.1| GTP-binding protein Length = 218 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 41/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K IS + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIS---DRSAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii] gi|2500073|sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 gi|806724|gb|AAA82727.1| YptC1 gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta] gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii] Length = 203 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 71/235 (30%), Gaps = 49/235 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTVELDGKVIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L +VG+K D+ K+ V Sbjct: 116 KL-----------------------------------LVGNKSDLT-----SKKVVEYSV 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA 266 + A G + TS+K+ T + ++ + + I T P+ P Sbjct: 136 AKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPVVRPQ 190 >gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens] Length = 218 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 76/248 (30%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DCAAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150 [Aspergillus niger] gi|134076075|emb|CAK39434.1| unnamed protein product [Aspergillus niger] Length = 523 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 55/380 (14%), Positives = 107/380 (28%), Gaps = 58/380 (15%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK----------- 67 + + ++ P ++ + +G + L Sbjct: 27 KKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFLDTLAADSSDPSLSNDKRKGRVP 85 Query: 68 ---PTLALEYTFGRRARGHNTPK-DIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVLV 122 AL YT+ + + L S + L++ +T ++ VV++ Sbjct: 86 PVANQFALGYTYQDVLDADHEDTLARVSAYLLSEPSLSFAPLLKPLLTPQSIPETLVVIL 145 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK---------- 172 LD S P + + R V K + + R Sbjct: 146 LDWSDPWTWIRRLREWVRLLR-HVLISLDDETKIVMEENLTEWRDRKRGMDSSSGGAQGF 204 Query: 173 ---------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 E +P+ +V D + E+ I + +R L Sbjct: 205 TSSAGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEQFDFILQFMRTLLL 264 Query: 218 FYGASLIFTSSKSETTMS--KSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 +GASLI+T+ ++ S + K D K + +P+ DS +I Sbjct: 265 KHGASLIYTTPFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPSNWDSWGKIR 323 Query: 276 PPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLID--SIR 333 G A + + E + + D D Q + + D S Sbjct: 324 IIREGFDMEGISTAWSI--EIQDPPEPLT--------NGVDDRSSDEQTANAVDDGTSAV 373 Query: 334 AQKDQELDQYKREQAKSWKS 353 A +Q + KR+ + + Sbjct: 374 AIFEQTIQDPKRDTSMALTG 393 >gi|109105440|ref|XP_001118047.1| PREDICTED: similar to RAB1B, member RAS oncogene family [Macaca mulatta] Length = 271 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 81/294 (27%), Gaps = 66/294 (22%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEE------DAHFPSQRTVFFMGSKAGGKTTI 55 P LW AA + RE+ A E + + + +G GK+ + Sbjct: 36 PARRGRGLWGGAATILE-REAEQSRLGATERAAAAAMNPEYDYLFKLLLIGDSGVGKSCL 94 Query: 56 LLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADN 113 LLRF + E+ T+ +++ R + +W+ G + + Sbjct: 95 LLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAH 152 Query: 114 VSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD 173 +++V D++ + + ++ L + L +S Sbjct: 153 ----GIIVVYDVTDQES-YANVKQWLQEIDRYASENVNKLLVGNKSDLTT---------- 197 Query: 174 YPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 K+ V T + A G + TS+K+ T Sbjct: 198 ------------------------------KKVVDNTTAKEFADSLGIPFLETSAKNATN 227 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTL 287 + ++ + P + S L +I G Sbjct: 228 VEQAFMTMAAEIKKRMGPGAASGGERPNL----------KIDSTPVKPAGGGCC 271 >gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis] gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis] Length = 218 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 78/254 (30%), Gaps = 53/254 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAK 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA-GSDSLS 272 A G S I TS+ T + + I + K I P + + S+++ Sbjct: 141 AFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQI---HDSPSSDGSHPSNNVQ 197 Query: 273 QIGPPVATEVDIGT 286 I T+ D Sbjct: 198 TIHVAPTTDDDRKK 211 >gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vinifera] Length = 215 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 44/250 (17%), Positives = 76/250 (30%), Gaps = 49/250 (19%) Query: 32 EDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDI 89 D + V +G GK+ +L RF + +K T+ +E+ T K Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA- 63 Query: 90 AHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKV 149 +W+ G + L +LV D++KP E + L R+ + Sbjct: 64 -QIWDTAGQERYRAITSAYYRGA----LGALLVYDVTKPTTF-ENVSRWLKELRDHADSN 117 Query: 150 CAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVIC 209 + +G+K D+ R V Sbjct: 118 IVIML-----------------------------------IGNKTDLKH-----LRAVAT 137 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 + + A G S I TS+ T + K+ I + K++S+D P I G Sbjct: 138 EDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTLSSDDPAPAGIKEGKT 197 Query: 270 SLSQIGPPVA 279 + Sbjct: 198 LVVDGSDTNT 207 >gi|55742328|ref|NP_001007162.1| RAB1A, member RAS oncogene family [Danio rerio] gi|27817324|emb|CAD61089.1| novel protein similar to human RAS oncogene family member RAB1B [Danio rerio] gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio] gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio] Length = 201 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 73/248 (29%), Gaps = 59/248 (23%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L +VG+K D+ K+ V T Sbjct: 116 KL-----------------------------------LVGNKCDLTT-----KKVVDYTT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + P A GS+ Sbjct: 136 AKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM----------GPGATAGGSEKT 185 Query: 272 SQIGPPVA 279 +I Sbjct: 186 MKIESTPV 193 >gi|114577812|ref|XP_530454.2| PREDICTED: hypothetical protein [Pan troglodytes] Length = 211 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 70/256 (27%), Gaps = 58/256 (22%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + F + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 12 SEFDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQ 69 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 70 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYASENVN 124 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + K+ V T Sbjct: 125 KLLVGNKCDLTT----------------------------------------KKVVDYTT 144 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + +S + P + + K S Sbjct: 145 AKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK---------SN 195 Query: 272 SQIGPPVATEVDIGTL 287 +I + G Sbjct: 196 VKIQSTPVKQSGGGCC 211 >gi|15217622|ref|NP_171715.1| ATRAB1B (Arabidopsis thaliana responsive to abscisic acid 1B); GTP binding gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana] gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana] Length = 203 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 68/244 (27%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDEESF-NNVKQWLSEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ E R + +T Sbjct: 116 KLLVGN-----------------------------------KSDLT-----ENRAIPYET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K T + ++ ++ + + P G Sbjct: 136 AKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPTVQIRGQPVA 195 Query: 272 SQIG 275 + G Sbjct: 196 QKNG 199 >gi|60302752|ref|NP_001012569.1| RAB11B, member RAS oncogene family [Gallus gallus] gi|126323801|ref|XP_001376337.1| PREDICTED: hypothetical protein [Monodelphis domestica] gi|60098771|emb|CAH65216.1| hypothetical protein [Gallus gallus] Length = 218 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRSAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|114638536|ref|XP_001150399.1| PREDICTED: similar to RAB1B, member RAS oncogene family [Pan troglodytes] Length = 255 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 82/294 (27%), Gaps = 66/294 (22%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEE------DAHFPSQRTVFFMGSKAGGKTTI 55 P LW AA + RE+ A E ++ + + +G GK+ + Sbjct: 20 PARRGRGLWGGAATILE-REAEQSRLGATERAAAAAMNSEYDYLFKLLLIGDSGVGKSCL 78 Query: 56 LLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADN 113 LLRF + E+ T+ +++ R + +W+ G + + Sbjct: 79 LLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAH 136 Query: 114 VSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD 173 +++V D++ + + ++ L + L +S Sbjct: 137 ----GIIVVYDVTDQES-YANVKQWLQEIDRYASENVNKLLVGNKSDLTT---------- 181 Query: 174 YPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 K+ V T + A G + TS+K+ T Sbjct: 182 ------------------------------KKVVDNTTAKEFADSLGIPFLETSAKNATN 211 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTL 287 + ++ + P + S L +I G Sbjct: 212 VEQAFMTMAAEIKKRMGPGAASGGERPNL----------KIDSTPVKPAGGGCC 255 >gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct] Length = 219 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 76/248 (30%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DCAAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|1053067|gb|AAA80680.1| small GTP-binding protein Length = 203 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 69/244 (28%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + ++ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDITDQESF-NNVKQWLSEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ ++ R V T Sbjct: 116 KLLVGN-----------------------------------KSDL-----NDNRAVSYDT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + S+KS T + ++ + + S + P G Sbjct: 136 AKAFADEIGIPFMEASAKSATNVEQAFMAMAAEIKNRMATQPASNNAKPPTVQIRGQPVN 195 Query: 272 SQIG 275 + G Sbjct: 196 QKNG 199 >gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum] Length = 203 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 69/244 (28%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + ++ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDITDQESF-NNVKQWLSEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ ++ R V T Sbjct: 116 KLLVGN-----------------------------------KSDL-----NDNRAVSYDT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + S+KS T + ++ + + S + P G Sbjct: 136 AKAFADEIGIPFMEASAKSATNVEQAFMAMAAEIKNRMATQPASNNAKPPTVQIRGQPVN 195 Query: 272 SQIG 275 + G Sbjct: 196 QKSG 199 >gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum] Length = 202 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 24/233 (10%), Positives = 64/233 (27%), Gaps = 49/233 (21%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + ++ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + + V +T Sbjct: 116 KLLVGNKCDLA----------------------------------------ANKVVSSET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 + A G + TS+K+ T + ++ + + + + I Sbjct: 136 AKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPANNARPPTVQI 188 >gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus tropicalis] gi|148230336|ref|NP_001080138.1| RAB1, member RAS oncogene family [Xenopus laevis] gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis] gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus tropicalis] gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus tropicalis] Length = 204 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 30/260 (11%), Positives = 69/260 (26%), Gaps = 59/260 (22%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D++ + ++ L Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L + K+ V Sbjct: 115 ENVNKLLVGNKCDLTT----------------------------------------KKVV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 T + A G + TS+K+ T + ++ + P A G Sbjct: 135 DYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM----------GPGATAGG 184 Query: 268 SDSLSQIGPPVATEVDIGTL 287 + +I + G Sbjct: 185 QEKNVKIQSTPVKQSSGGCC 204 >gi|149725600|ref|XP_001491236.1| PREDICTED: hypothetical protein [Equus caballus] Length = 239 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 81/294 (27%), Gaps = 66/294 (22%) Query: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEE------DAHFPSQRTVFFMGSKAGGKTTI 55 P LW AA + RE+ A E + + + +G GK+ + Sbjct: 4 PARRGRGLWGGAATILE-REAEQSRLGATERAAAAAMNPEYDYLFKLLLIGDSGVGKSCL 62 Query: 56 LLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADN 113 LLRF + E+ T+ +++ R + +W+ G + + Sbjct: 63 LLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAH 120 Query: 114 VSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKD 173 +++V D++ + + ++ L + L +S Sbjct: 121 ----GIIVVYDVTDQES-YANVKQWLQEIDRYASENVNKLLVGNKSDLTT---------- 165 Query: 174 YPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETT 233 K+ V T + A G + TS+K+ T Sbjct: 166 ------------------------------KKVVDNTTAKEFADSLGIPFLETSAKNATN 195 Query: 234 MSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTL 287 + ++ + P + S L +I G Sbjct: 196 VEQAFMTMAAEIKKRMGPGAASGGERPNL----------KIDSTPVKPAGGGCC 239 >gi|1053063|gb|AAA80678.1| small GTP-binding protein Length = 203 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 67/244 (27%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSRLLLRFADDSYLESYISTIGVDF--KIRTVDQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLSEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + ++ V +T Sbjct: 116 KLLVGNKCDLT----------------------------------------AQKVVSTET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + + S + P G Sbjct: 136 AQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVN 195 Query: 272 SQIG 275 + G Sbjct: 196 QKSG 199 >gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii] gi|3025293|sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 gi|806728|gb|AAA82729.1| YptC6 gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii] Length = 216 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 82/263 (31%), Gaps = 54/263 (20%) Query: 29 AEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTP 86 + + D + V +G GK+ +L RF + + +K T+ +E+ Sbjct: 2 SHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVD--GK 59 Query: 87 KDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQV 146 A +W+ G + + +LV D++K E +E L R+ Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGA----VGALLVYDITKSVTF-ENVERWLKELRDHA 114 Query: 147 EKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRK 206 + +++VG+K D+ R Sbjct: 115 DSNIV-----------------------------------IMLVGNKSDLKH-----LRD 134 Query: 207 VICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA 266 V + + G S I TS+ T + K+ I + K + ++ ++P I Sbjct: 135 VQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRP-KIGE 193 Query: 267 GSDSLSQIGPPVATEVDIGTLHA 289 G D + D G Sbjct: 194 GRDVI----VIDNAHDDGGKKKG 212 >gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa (japonica cultivar-group)] gi|109940139|sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa (japonica cultivar-group)] gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa (japonica cultivar-group)] gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa (japonica cultivar-group)] gi|125526416|gb|EAY74530.1| hypothetical protein OsI_002377 [Oryza sativa (indica cultivar-group)] gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_002158 [Oryza sativa (japonica cultivar-group)] Length = 202 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 29/244 (11%), Positives = 64/244 (26%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + E R V + Sbjct: 116 KLLVGNKCDLA----------------------------------------ENRVVSYEA 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + LA G + TS+K T + K+ + + + G Sbjct: 136 GKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQMRGQPVA 195 Query: 272 SQIG 275 Q Sbjct: 196 QQSS 199 >gi|131785|sp|P22125|RAB1_DISOM Ras-related protein ORAB-1 gi|213123|gb|AAA49234.1| GTP-binding protein Length = 202 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 31/256 (12%), Positives = 67/256 (26%), Gaps = 58/256 (22%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + K+ V T Sbjct: 116 KLLVGNKCDLTT----------------------------------------KKVVDYTT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + P + S K S Sbjct: 136 AKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEK---------SN 186 Query: 272 SQIGPPVATEVDIGTL 287 I G Sbjct: 187 VNIQSTPVKSSGGGCC 202 >gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum] gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba] gi|738942|prf||2001457K GTP-binding protein gi|1098293|prf||2115367A small GTP-binding protein Length = 202 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 66/244 (27%), Gaps = 50/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + ++ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDEESF-NNVKQWLSEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + E R V +T Sbjct: 116 KLLVGNKCDLT----------------------------------------ENRAVPYET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K T + ++ + + + + I G Sbjct: 136 AKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKERMASQPTNNARPPTVQI-RGQPVG 194 Query: 272 SQIG 275 + G Sbjct: 195 QKSG 198 >gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens] Length = 257 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 31/256 (12%), Positives = 69/256 (26%), Gaps = 58/256 (22%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 58 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQ 115 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 116 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYASENVN 170 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + K+ V T Sbjct: 171 KLLVGNKCDLTT----------------------------------------KKVVDYTT 190 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + +S + P + + K S Sbjct: 191 AKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK---------SN 241 Query: 272 SQIGPPVATEVDIGTL 287 +I + G Sbjct: 242 VKIQSTPVKQSGGGCC 257 >gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens] Length = 218 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 39/248 (15%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I T++ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQIA---DRAAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct] gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct] Length = 206 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 70/260 (26%), Gaps = 58/260 (22%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D++ + ++ L Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L + K+ V Sbjct: 115 ENVNKLLVGNKCDLTT----------------------------------------KKVV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 T + A G + TS+K+ T + +S + P + + K Sbjct: 135 DYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK------- 187 Query: 268 SDSLSQIGPPVATEVDIGTL 287 S +I + G Sbjct: 188 --SNVKIQSTPVKQSGGGCC 205 >gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] Length = 218 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---ERSAHGESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] gi|148234494|ref|NP_001087765.1| MGC84419 protein [Xenopus laevis] gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis] gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] Length = 216 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 77/252 (30%), Gaps = 52/252 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNKIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + +S D + P+ ++ Sbjct: 141 AFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQMS-DRRENDMSPSN--NVVP 197 Query: 274 IGPPVATEVDIG 285 I P TE Sbjct: 198 IHVPPTTENKPK 209 >gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa (japonica cultivar-group)] gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa (japonica cultivar-group)] gi|125524668|gb|EAY72782.1| hypothetical protein OsI_000629 [Oryza sativa (indica cultivar-group)] gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_000604 [Oryza sativa (japonica cultivar-group)] Length = 203 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 27/242 (11%), Positives = 70/242 (28%), Gaps = 49/242 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + ++ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDQESF-NNVKQWLNEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L +K D+ + + V +T Sbjct: 116 KLLVG-----------------------------------NKSDLTAN-----KVVSSET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + + +++ P G Sbjct: 136 AKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAASNARPPTVQIRGQPVN 195 Query: 272 SQ 273 + Sbjct: 196 QK 197 >gi|4758988|ref|NP_004152.1| RAB1A, member RAS oncogene family [Homo sapiens] gi|6679587|ref|NP_033022.1| RAB1, member RAS oncogene family [Mus musculus] gi|45433570|ref|NP_112352.2| RAB1, member RAS oncogene family [Rattus norvegicus] gi|55741705|ref|NP_001003153.1| RAB1A, member RAS oncogene family [Canis lupus familiaris] gi|109103156|ref|XP_001090072.1| PREDICTED: similar to RAB1, member RAS oncogene family isoform 4 [Macaca mulatta] gi|149727528|ref|XP_001493347.1| PREDICTED: similar to RAB1A, member RAS oncogene family [Equus caballus] gi|51338603|sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A (YPT1-related protein) gi|51338604|sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A (YPT1-related protein) gi|51338716|sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A gi|51338790|sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus] gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens] gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus] gi|550060|gb|AAA60240.1| GTP-binding protein gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus] gi|6006435|emb|CAB56775.1| rab1 [Canis familiaris] gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens] gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus] gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens] gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus] gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus] gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens] gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens] gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens] gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct] gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct] gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus] gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus] gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus] gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus] gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens] gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens] gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus] gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct] gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus] gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus] gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus] Length = 205 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 70/260 (26%), Gaps = 58/260 (22%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D++ + ++ L Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L + K+ V Sbjct: 115 ENVNKLLVGNKCDLTT----------------------------------------KKVV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 T + A G + TS+K+ T + +S + P + + K Sbjct: 135 DYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK------- 187 Query: 268 SDSLSQIGPPVATEVDIGTL 287 S +I + G Sbjct: 188 --SNVKIQSTPVKQSGGGCC 205 >gi|148236881|ref|NP_001088852.1| hypothetical protein LOC496163 [Xenopus laevis] gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis] Length = 218 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 75/248 (30%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + +S I + K ++ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMA---DRAAHEDSPGNNVVD 197 Query: 274 IGPPVATE 281 I + Sbjct: 198 ISVTPTMD 205 >gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella] Length = 218 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 43/251 (17%), Positives = 77/251 (30%), Gaps = 53/251 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIVIM 120 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 Q VG+K D+ R V + Sbjct: 121 Q-----------------------------------VGNKSDLRH-----LRAVPTDEAK 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPA-GSDSLS 272 A G S I TS+ T + + I + K I P + + S+++ Sbjct: 141 AFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQI---HDSPTSDGSHPSNNVQ 197 Query: 273 QIGPPVATEVD 283 I T+ D Sbjct: 198 TIHVAPTTDED 208 >gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family [Xenopus laevis] gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis] Length = 218 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 79/260 (30%), Gaps = 52/260 (20%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPK 87 D + V +G GK+ +L RF + +K T+ +E+ Sbjct: 2 GARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 A +W+ G + + +LV D++K +E +E L R+ + Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRG----VVGALLVYDIAKHLT-YENVERWLKELRDHAD 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 +++VG+K D+ R V Sbjct: 115 NNIV-----------------------------------IMLVGNKSDLRH-----LRAV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 R A S I TS+ T + ++ I + K I+ + + Sbjct: 135 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRSAHDESP 191 Query: 268 SDSLSQIGPPVATEVDIGTL 287 +++ I P T+ + Sbjct: 192 GNNVVDISVPPTTDGQKSSK 211 >gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max] Length = 202 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 62/233 (26%), Gaps = 49/233 (21%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDEESF-NNVKQWLSEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + R V +T Sbjct: 116 KLLVGNKCDL----------------------------------------EANRAVSYET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 + A G + TS+K T + ++ + + + + I Sbjct: 136 AKAFADGIGIPFMETSAKDATNVEQAFMAMTASIKDRMASQPANNARPPTVQI 188 >gi|72535190|ref|NP_001026957.1| RAB1B, member RAS oncogene family [Sus scrofa] gi|75056559|sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa] Length = 205 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 70/260 (26%), Gaps = 58/260 (22%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D++ + ++ L Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQGSF-NNVKQWLQEIDRYAS 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L + K+ V Sbjct: 115 ENVNKLLVGNKCDLTT----------------------------------------KKVV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 T + A G + TS+K+ T + +S + P + + K Sbjct: 135 DYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK------- 187 Query: 268 SDSLSQIGPPVATEVDIGTL 287 S +I + G Sbjct: 188 --SNVKIQSTPVKQSGGGCC 205 >gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum] gi|738941|prf||2001457J GTP-binding protein Length = 203 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 66/244 (27%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDEESF-NNVKQWLSEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ + R V T Sbjct: 116 KLLVGN-----------------------------------KSDLTAN-----RVVSYDT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K T + + + + + + P G Sbjct: 136 AKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANNARPPTVQIRGQPVG 195 Query: 272 SQIG 275 + G Sbjct: 196 QKGG 199 >gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa] gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa (japonica cultivar-group)] Length = 203 Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats. Identities = 27/242 (11%), Positives = 68/242 (28%), Gaps = 49/242 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + ++ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDQESF-NNVKQWLNEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ + + V +T Sbjct: 116 KLLVGN-----------------------------------KSDLTAN-----KVVSSET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + + + + P G Sbjct: 136 AKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAANARPPTVQIRGQPVN 195 Query: 272 SQ 273 + Sbjct: 196 QK 197 >gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis] Length = 203 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 25/224 (11%), Positives = 62/224 (27%), Gaps = 49/224 (21%) Query: 33 DAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIA 90 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 TTEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKMIKL 59 Query: 91 HLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVC 150 +W+ G + + +++V D++ + ++ L + Sbjct: 60 QIWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEINRYASENV 114 Query: 151 AALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICK 210 L + +R V + Sbjct: 115 NKLLVGNKCDLTT----------------------------------------RRVVSYQ 134 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSI 254 T + A G + TS+K+ T + ++ + + Sbjct: 135 TGKDFADSLGIPFLETSAKNATNVEEAFMTMASEIKKRMASQPA 178 >gi|52345666|ref|NP_001004880.1| MGC88884 protein [Xenopus tropicalis] gi|49671143|gb|AAH75268.1| MGC88884 protein [Xenopus tropicalis] Length = 218 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 75/248 (30%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + +S I + K ++ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMA---DRAAHEDSPGNNVVD 197 Query: 274 IGPPVATE 281 I + Sbjct: 198 ISVTPTMD 205 >gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus] Length = 217 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 75/261 (28%), Gaps = 51/261 (19%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPK 87 +D + V +G GK+ +L RF + +K T+ +E+ Sbjct: 2 GSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 A +W+ G + + +LV D++K +E +E L R+ + Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHAD 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + +++VG+K D+ R V Sbjct: 115 QNIV-----------------------------------IMLVGNKSDLRH-----LRAV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 R A S I TS+ T + + I + K I D Sbjct: 135 PTDEARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIRNDTDN--DPSPS 192 Query: 268 SDSLSQIGPPVATEVDIGTLH 288 D++ I D Sbjct: 193 GDNVKPISIAPTDSSDTRKKQ 213 >gi|56205120|emb|CAI24449.1| RAB1, member RAS oncogene family [Mus musculus] Length = 202 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 31/256 (12%), Positives = 69/256 (26%), Gaps = 58/256 (22%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + K+ V T Sbjct: 116 KLLVGNKCDLTT----------------------------------------KKVVDYTT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + +S + P + + K S Sbjct: 136 AKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK---------SN 186 Query: 272 SQIGPPVATEVDIGTL 287 +I + G Sbjct: 187 VKIQSTPVKQSGGGCC 202 >gi|149640905|ref|XP_001513393.1| PREDICTED: similar to RAB1A, member RAS oncogene family [Ornithorhynchus anatinus] Length = 228 Score = 220 bits (562), Expect = 8e-56, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 69/260 (26%), Gaps = 58/260 (22%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 25 SALSPYSDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 82 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D++ + ++ L Sbjct: 83 IKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYAS 137 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L + K+ V Sbjct: 138 ENVNKLLVGNKCDLTT----------------------------------------KKVV 157 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 T + A G + TS+K+ T + +S + P + + K Sbjct: 158 DYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK------- 210 Query: 268 SDSLSQIGPPVATEVDIGTL 287 S +I + G Sbjct: 211 --SNVKIQSTPVKQSSGGCC 228 >gi|3024504|sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B gi|623578|gb|AAA74113.1| putative Length = 217 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 29/254 (11%), Positives = 74/254 (29%), Gaps = 49/254 (19%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + + +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 11 YDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDD--KIVKAQIW 68 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + ++V D+++ E +E L R+ ++ Sbjct: 69 DTAGQERYRAITSAYYRGA----VGALVVYDITRHVTF-ENVERWLKELRDHTDQNIV-- 121 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + + Sbjct: 122 ---------------------------------IMLVGNKADLRH-----LRAVSTEDAK 143 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A + TS+ + + + + + K++ + ++ + Sbjct: 144 AFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAALPKGQTINVGK 203 Query: 274 IGPPVATEVDIGTL 287 +V + Sbjct: 204 DDVSAVKKVGCCSS 217 >gi|50540176|ref|NP_001002555.1| hypothetical protein LOC436828 [Danio rerio] gi|125808482|ref|XP_001330902.1| PREDICTED: hypothetical protein [Danio rerio] gi|125808488|ref|XP_001336227.1| PREDICTED: hypothetical protein [Danio rerio] gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio] Length = 218 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 77/248 (31%), Gaps = 52/248 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 AFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---ERSAHDESPGNNVVD 197 Query: 274 IGPPVATE 281 I P T+ Sbjct: 198 ISVPPTTD 205 >gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus] Length = 253 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 31/262 (11%), Positives = 70/262 (26%), Gaps = 58/262 (22%) Query: 28 EAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNT 85 + + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 48 DMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDG 105 Query: 86 PKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 W+ G + + +++V D++ + ++ L Sbjct: 106 KTIKLQRWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRY 160 Query: 146 VEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKR 205 + L + K+ Sbjct: 161 ASENVNKLLVGNKCDLTT----------------------------------------KK 180 Query: 206 KVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIP 265 V T + A G + TS+K+ T + +S + P + + K Sbjct: 181 VVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK----- 235 Query: 266 AGSDSLSQIGPPVATEVDIGTL 287 S +I + G Sbjct: 236 ----SNVKIQSTPVKQSGGGCC 253 >gi|115447653|ref|NP_001047606.1| Os02g0653800 [Oryza sativa (japonica cultivar-group)] gi|113537137|dbj|BAF09520.1| Os02g0653800 [Oryza sativa (japonica cultivar-group)] gi|125540532|gb|EAY86927.1| hypothetical protein OsI_008160 [Oryza sativa (indica cultivar-group)] gi|125583107|gb|EAZ24038.1| hypothetical protein OsJ_007521 [Oryza sativa (japonica cultivar-group)] Length = 219 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 27/239 (11%), Positives = 67/239 (28%), Gaps = 49/239 (20%) Query: 37 PSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWE 94 + +G GK+ +LLRF + ++ T+ +++ R + +W+ Sbjct: 22 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF--KIRTVEQDGKTIKLQIWD 79 Query: 95 LGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQ 154 G + + +++V D++ + ++ L L Sbjct: 80 TAGQERFRTITSSYYRGAH----GIIIVYDVTDQESF-NNVKQWLNEIDRYASDNVNKLL 134 Query: 155 KTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRF 214 K D+ + + V +T + Sbjct: 135 VGN-----------------------------------KSDLTAN-----KVVSSETAKA 154 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G + TS+K+ T + ++ + + + + P G + Sbjct: 155 FADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAANARPPTVQIRGQPVNQK 213 >gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST] gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST] Length = 201 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 34/245 (13%), Positives = 74/245 (30%), Gaps = 49/245 (20%) Query: 33 DAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIA 90 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 SPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIDLDGKTIKL 59 Query: 91 HLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVC 150 +W+ G + + +++V D + ++ E ++ L Sbjct: 60 QIWDTAGQERFRTITSSYYRGAH----GIIVVYDCTDHDSF-ENVKQWLEEIERYACDNV 114 Query: 151 AALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICK 210 L + K++V Sbjct: 115 NKLLVGNKCDLQT----------------------------------------KKRVDTT 134 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 T LA+ G + TS+K+ T + ++ + P S + DP + I G + Sbjct: 135 TAMELANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAADPPSAVKIDKGRNV 194 Query: 271 LSQIG 275 ++ G Sbjct: 195 EAKSG 199 >gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris] Length = 202 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 30/232 (12%), Positives = 75/232 (32%), Gaps = 50/232 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLW 93 + + +G GK+ +LLRF + E+ T+ +++ R + +W Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDF--KIRTVEQDGKTIKLQIW 62 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +++V D++ + + ++ L Sbjct: 63 DTAGQERFRTITSSYYRGAH----GIIIVYDVTDQQSF-DNVKQWLNEIDRYASDNVVK- 116 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 ++VG+K D+ + + V +T + Sbjct: 117 ----------------------------------ILVGNKSDLTSN-----KVVSSETAK 137 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIP 265 A G + TS+K+ T + ++ + + S + ++P +P Sbjct: 138 AFADEIGIPFLETSAKNSTNVEQAFMTMAAEIKKRVASQPAS-NATRPTTVP 188 >gi|464524|sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis] Length = 205 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 74/244 (30%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 6 PDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQ 63 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 64 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYASENVN 118 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L +K D+ K+ V T Sbjct: 119 KLLVG-----------------------------------NKSDLTT-----KKVVDFTT 138 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + P + ++D + I + + Sbjct: 139 AKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDSKPSVKINSSTPVS 198 Query: 272 SQIG 275 + G Sbjct: 199 ANKG 202 >gi|55925277|ref|NP_001007360.1| RAB11a, member RAS oncogene family [Danio rerio] gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio] gi|94733840|emb|CAK10790.1| novel protein (zgc:103679) [Danio rerio] gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio] Length = 215 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 74/246 (30%), Gaps = 52/246 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTVKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S + TS+ T + + I + K +S D P+ ++ Sbjct: 141 AFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMS-DRRDNDMSPSN--NVVS 197 Query: 274 IGPPVA 279 I Sbjct: 198 IQVQPT 203 >gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HOMOLOG A2A); GTP binding [Arabidopsis thaliana] gi|3024516|sp|O04486|RB11C_ARATH Ras-related protein Rab11C gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene. [Arabidopsis thaliana] gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana] gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana] gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana] gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana] Length = 217 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 78/257 (30%), Gaps = 52/257 (20%) Query: 32 EDAHFPSQRTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDI 89 D + V +G GK+ +L RF + +K T+ +E+ T K Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA- 63 Query: 90 AHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKV 149 +W+ G + L +LV D++KP E + L R+ + Sbjct: 64 -QIWDTAGQERYRAITSAYYRGA----LGALLVYDVTKPTTF-ENVSRWLKELRDHADSN 117 Query: 150 CAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVIC 209 + ++G+K D+ R V Sbjct: 118 IVIM-----------------------------------LIGNKTDLKH-----LRAVAT 137 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 + + A G S I TS+ + K+ I + KSIS+D + A Sbjct: 138 EDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTA---NANIK 194 Query: 270 SLSQIGPPVATEVDIGT 286 I +E + Sbjct: 195 EGQTIDVAATSESNAKK 211 >gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis] Length = 203 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 25/242 (10%), Positives = 67/242 (27%), Gaps = 49/242 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTMKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ ++ ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDQDSF-NNVKQWLNEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + +K+ V +T Sbjct: 116 KLLVGNKCDLT----------------------------------------DKKVVSYET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ + ++ ++ + + + G Sbjct: 136 AKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANNARPATVQIRGQPVE 195 Query: 272 SQ 273 + Sbjct: 196 QK 197 >gi|118087671|ref|XP_419342.2| PREDICTED: hypothetical protein [Gallus gallus] gi|126303762|ref|XP_001374724.1| PREDICTED: similar to RAB1A, member RAS oncogene family, [Monodelphis domestica] Length = 205 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 70/260 (26%), Gaps = 58/260 (22%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D++ + ++ L Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L + K+ V Sbjct: 115 ENVNKLLVGNKCDLTT----------------------------------------KKVV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 T + A G + TS+K+ T + +S + P + + K Sbjct: 135 DYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK------- 187 Query: 268 SDSLSQIGPPVATEVDIGTL 287 S +I + G Sbjct: 188 --SNVKIQSTPVKQSSGGCC 205 >gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus] Length = 203 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 65/244 (26%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDF--KIRTVEQDAKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDEESF-NNVKQWLSEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + R V T Sbjct: 116 KLLVGNKCDLT----------------------------------------ANRAVSYDT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K T + ++ ++ + + + P G Sbjct: 136 AKEFADQIGIPFMETSAKDATNVEQAFMGMSASIKNRMASQPSANNGRPPTVQIRGQPVG 195 Query: 272 SQIG 275 + G Sbjct: 196 PKSG 199 >gi|91076508|ref|XP_973251.1| PREDICTED: similar to CG5771-PB, isoform B [Tribolium castaneum] Length = 215 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 79/261 (30%), Gaps = 52/261 (19%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPK 87 +D + V +G GK+ +L RF + +K T+ +E+ Sbjct: 2 SSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVD--GKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 A +W+ G + + +LV D++K +E +E L R+ + Sbjct: 60 IKAQIWDTAGQERYRAITAAYYRGA----VGALLVYDIAKHLT-YENVERWLRELRDHAD 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + +++VG+K D+ R V Sbjct: 115 QNIV-----------------------------------IMLVGNKSDLRH-----LRAV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + + + A G S I TS+ T + + I + K I P + P Sbjct: 135 LTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIRDPPEGDVIRP-- 192 Query: 268 SDSLSQIGPPVATEVDIGTLH 288 ++ I D Sbjct: 193 -HNVEPIDVKPTMNTDGVRKQ 212 >gi|206553|gb|AAA42006.1| ras protein Length = 205 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 70/260 (26%), Gaps = 58/260 (22%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D++ + ++ L Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L + K+ V Sbjct: 115 ENVNKLLVGNKCDLTT----------------------------------------KKVV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 T + A G + TS+K+E + +S + P + + K Sbjct: 135 DYTTAKEFADSLGIPFLETSAKNEKNVEQSFMTMAAEIKKRMGPGATAGGAEK------- 187 Query: 268 SDSLSQIGPPVATEVDIGTL 287 S +I + G Sbjct: 188 --SNVKIQSTPVKQSGGGCC 205 >gi|157344192|emb|CAO69125.1| unnamed protein product [Vitis vinifera] Length = 215 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 72/235 (30%), Gaps = 49/235 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLW 93 + + +G GK+ IL RF + +K T+ +E+ A +W Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE--GKTVKAQIW 66 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K E ++ L R+ + + Sbjct: 67 DTAGQERYRAITSAYYRGA----VGALLVYDITKRQTF-ENVQRWLRELRDHADSNIVIM 121 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 G+K D+ R V + Sbjct: 122 MA-----------------------------------GNKSDLNH-----LRAVSGDDAQ 141 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 LA G S + TS+ + K+ I + K+++ + + +P G+ Sbjct: 142 ILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASINLPHGT 196 >gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa (japonica cultivar-group)] gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa (japonica cultivar-group)] gi|125595229|gb|EAZ35288.1| hypothetical protein OsJ_018771 [Oryza sativa (japonica cultivar-group)] Length = 217 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 31/235 (13%), Positives = 71/235 (30%), Gaps = 50/235 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + + +K T+ +E+ A +W Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD--KVVKAQIW 66 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + ++V D+++ E +E + ++ + Sbjct: 67 DTAGQERYRAITSAYYRGA----VGALVVYDVTRHVTF-ENVERWMRELKDHTDANIV-- 119 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + + Sbjct: 120 ---------------------------------IMLVGNKADLRH-----LRAVSTEDAK 141 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 A + TS+ + + + + + K++ P A P G Sbjct: 142 AFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIG-DDPAAPPKGQ 195 >gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis] Length = 217 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 69/235 (29%), Gaps = 49/235 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + + +K T+ +E+ A +W Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDD--KVIKAQIW 66 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+++ E +E L R+ + Sbjct: 67 DTAGQERYRAITSAYYRGA----VGALLVYDVTRHVTF-ENVERWLKELRDHTDANIV-- 119 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + + Sbjct: 120 ---------------------------------IMLVGNKADLRH-----LRAVSIEDGK 141 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 A + TS+ T + + + + + K++ G Sbjct: 142 AFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKALDVGEDPAAVPSKGQ 196 >gi|94733945|emb|CAK04342.1| novel protein (zgc:55760) [Danio rerio] Length = 205 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 75/241 (31%), Gaps = 52/241 (21%) Query: 43 FFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLWELGGGIS 100 +G GK+ +L RF + +K T+ +E+ A +W+ G Sbjct: 2 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIWDTAGQER 59 Query: 101 LSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESR 160 + + +LV D++K +E +E L R+ + Sbjct: 60 YRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV--------- 105 Query: 161 SGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYG 220 +++VG+K D+ R V R A Sbjct: 106 --------------------------IMLVGNKSDLRH-----LRAVPTDEARAFAEKNN 134 Query: 221 ASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVAT 280 S I TS+ T + ++ I + K + +P + +++ I P T Sbjct: 135 LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMV---DRPGHDESPGNNVVDISVPPTT 191 Query: 281 E 281 + Sbjct: 192 D 192 >gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis] Length = 216 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 78/252 (30%), Gaps = 52/252 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADNNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A S I TS+ T + ++ I + K I+ + + +++ Sbjct: 141 VFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIA---DRSAHDESPGNNVVD 197 Query: 274 IGPPVATEVDIG 285 I P T+ G Sbjct: 198 ISVPPTTDGQKG 209 >gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti] gi|108879268|gb|EAT43493.1| ras-related protein Rab-1A, putative [Aedes aegypti] Length = 206 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 72/250 (28%), Gaps = 49/250 (19%) Query: 28 EAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNT 85 A + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 SASAMSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIDLDG 59 Query: 86 PKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQ 145 +W+ G + + +++V D + + +++ L Sbjct: 60 KTIKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDCTDQESF-NNVKTWLEEIERY 114 Query: 146 VEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKR 205 + L K D+ K+ Sbjct: 115 ACENVNKLLVGN-----------------------------------KCDLQT-----KK 134 Query: 206 KVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIP 265 V T A+ G + TS+K+ T + ++ + P S + + + I Sbjct: 135 VVDTTTAMEYANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAAEAPSAVKID 194 Query: 266 AGSDSLSQIG 275 S+ G Sbjct: 195 KSRSVESKSG 204 >gi|217841|dbj|BAA00832.1| small GTP-binding protein [Arabidopsis thaliana] Length = 195 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 67/238 (28%), Gaps = 49/238 (20%) Query: 40 RTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +LLRF + E+ T+ +++ R + +W+ G Sbjct: 1 FKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDF--KIRTVEQDGKTIKLQIWDTAG 58 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 + + +++V D++ + ++ L L Sbjct: 59 QERFRTITSSYYRGAH----GIIIVYDVTDEESF-NNVKQWLSEIDRYASDNVNKLLVGN 113 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 K D+ E R + +T + A Sbjct: 114 -----------------------------------KSDLT-----ENRAIPYETAKAFAD 133 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 G + TS+K T + ++ ++ + + P G + G Sbjct: 134 EIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPTVQIRGQPVAQKNG 191 >gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus] Length = 203 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 65/244 (26%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFGDDSYIESYISTIGVDF--KIRTVEQDAKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDEESF-NNVKQWLSEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + R V T Sbjct: 116 KLLVGNKCDLT----------------------------------------ANRAVSYDT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K T + ++ ++ + + + P G Sbjct: 136 AKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANNGRPPTVQIRGQPVG 195 Query: 272 SQIG 275 + G Sbjct: 196 QKSG 199 >gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum] gi|738940|prf||2001457H GTP-binding protein Length = 202 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 27/244 (11%), Positives = 69/244 (28%), Gaps = 50/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + ++ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ + + V +T Sbjct: 116 KLLVGN-----------------------------------KSDLA-----DNKVVSSET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ + ++ + + + + I G Sbjct: 136 AKAFADEIGIPFMETSAKNANNVEQAFMAMAAEIKNRMASQPSNNARPPTVQI-RGQPVN 194 Query: 272 SQIG 275 + G Sbjct: 195 QKSG 198 >gi|109940137|sp|P25766|RGP1_ORYSJ Ras-related protein RGP1 (GTP-binding regulatory protein RGP1) gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa (japonica cultivar-group)] Length = 226 Score = 218 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 72/248 (29%), Gaps = 49/248 (19%) Query: 33 DAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIA 90 V +G A GK+ +L RF + +K T+ +E+ T K Sbjct: 12 GQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKA-- 69 Query: 91 HLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVC 150 +W+ G + + +LV D++K + + L R +K Sbjct: 70 QIWDTAGQERYRAVTSAYYRGA----VGAMLVYDITKRQSFDH-VARWLEELRGHADKNI 124 Query: 151 AALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICK 210 + ++G+K D+ R V + Sbjct: 125 VIM-----------------------------------LIGNKSDL-----GTLRVVPTE 144 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDS 270 + A + TS+ T + + + + K++ + + + Sbjct: 145 DAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSLLK 204 Query: 271 LSQIGPPV 278 ++I P Sbjct: 205 GTKIVVPG 212 >gi|66513627|ref|XP_623997.1| PREDICTED: similar to Rab-protein 11 CG5771-PB, isoform B [Apis mellifera] Length = 215 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 74/255 (29%), Gaps = 52/255 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ ++ Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLRELRDHADQNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAK 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + K I P P ++ Sbjct: 141 AFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDTIRPQ---NVEP 197 Query: 274 IGPPVATEVDIGTLH 288 I + Sbjct: 198 IDVKPTMNSEGMRKQ 212 >gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus] Length = 205 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 70/260 (26%), Gaps = 58/260 (22%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D++ + ++ L Sbjct: 60 IKLQIWDTAGEERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L + K+ V Sbjct: 115 ENVNKLLVGNKCDLTT----------------------------------------KKVV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 T + A G + TS+K+ T + +S + P + + K Sbjct: 135 DYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK------- 187 Query: 268 SDSLSQIGPPVATEVDIGTL 287 S +I + G Sbjct: 188 --SNVKIQSTPVKQSGGGCC 205 >gi|41056251|ref|NP_956417.1| hypothetical protein LOC386994 [Danio rerio] gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio] Length = 216 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 71/253 (28%), Gaps = 52/253 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVE--GKTVKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E E L ++ + + Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENAERWLKELQDHADSNIVIM 120 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 VG+K D+ R V + Sbjct: 121 L-----------------------------------VGNKSDLRH-----LRAVPMDEAK 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A +G S + TS+ + + + I + + +S P+ + Sbjct: 141 AFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQMS-GRGDDSFSPSSK--VVP 197 Query: 274 IGPPVATEVDIGT 286 I + Sbjct: 198 ITVQPTQNSGKQS 210 >gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi] Length = 215 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 80/260 (30%), Gaps = 51/260 (19%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPK 87 D + V +G GK+ +L RF + +K T+ +E+ Sbjct: 2 GSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVE--GKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 A +W+ G + + +LV D++K +E +E L R+ + Sbjct: 60 VKAQIWDTAGQERYRAITSAYYRGA----VGALLVYDIAKHVT-YENVERWLKELRDHAD 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + +++VG+K D+ R V Sbjct: 115 QNIV-----------------------------------IMLVGNKSDLRH-----LRAV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + A S I TS+ T + + + I + + K + D ++ G Sbjct: 135 PTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHVGGD-NRAAISTPG 193 Query: 268 SDSLSQIGPPVATEVDIGTL 287 S+ + I P + Sbjct: 194 SNGIV-ISPTAEPQTKKQCC 212 >gi|2500076|sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 gi|940432|gb|AAB40355.1| ras related protein PiYpt1 Length = 201 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 30/256 (11%), Positives = 66/256 (25%), Gaps = 60/256 (23%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLHEIDRYACENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L G+K D+ KR V Sbjct: 116 KLLV-----------------------------------GNKSDLT-----AKRVVSTDA 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ + K+ + P + + G Sbjct: 136 AKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAP--VAPKAGVKLTPGQQ-- 191 Query: 272 SQIGPPVATEVDIGTL 287 Sbjct: 192 -------VPSNGGSKC 200 >gi|3024528|sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris] Length = 214 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 71/250 (28%), Gaps = 53/250 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLW 93 + + +G GK+ IL RF + +K T+ +E+ A +W Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE--GKTVKAQIW 66 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K + ++ L R+ + + Sbjct: 67 DTAGQERYRAITSAYYRGA----VGALLVYDITKRQTF-DNVQRWLRELRDHADSNIVIM 121 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 K D+ R V + + Sbjct: 122 MAGN-----------------------------------KSDLKH-----LRAVSEEDGQ 141 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 LA G S + TS+ + K+ I + K+++ + G+ Sbjct: 142 ALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQGT----T 197 Query: 274 IGPPVATEVD 283 I A+ Sbjct: 198 INVADASANQ 207 >gi|125773595|ref|XP_001358056.1| GA17362-PA [Drosophila pseudoobscura] gi|54637791|gb|EAL27193.1| GA17362-PA [Drosophila pseudoobscura] Length = 205 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 74/245 (30%), Gaps = 49/245 (20%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 SSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D + + ++ L Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDCTDQESF-NNVKQWLEEIERYAC 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L +VG+K D+ K+ V Sbjct: 115 ENVNKL-----------------------------------LVGNKSDLTT-----KKVV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 T A G + TS+KS T + ++ + P S +TD + + I G Sbjct: 135 DHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQG 194 Query: 268 SDSLS 272 Sbjct: 195 RPVEK 199 >gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti] gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti] gi|108874607|gb|EAT38832.1| rab11 [Aedes aegypti] Length = 215 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 42/247 (17%), Positives = 77/247 (31%), Gaps = 53/247 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ R+ + A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFA--TRSIEVDGKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ ++ Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLRELRDHADQNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAK 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + K I P + P +L Sbjct: 141 GFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGSVIRP----NLEN 196 Query: 274 IGPPVAT 280 I Sbjct: 197 IDVKPTN 203 >gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermediate chain [Tetrahymena thermophila] Length = 474 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 102/359 (28%), Positives = 174/359 (48%), Gaps = 24/359 (6%) Query: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHF------PSQRTVFFMGSKAGGKTT 54 M + D + EV + + + E++ ++T+ +G K GKTT Sbjct: 1 MNRNQEDNEQE--NNEVNKGDRSNIDLWSHAEESELKQGFAKNLEKTLVVIGDKGSGKTT 58 Query: 55 ---ILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITA 111 IL + D+ PT+ L+Y + RR + K++ H +ELGGG S ++ IPI+ Sbjct: 59 FVNILKNMQQVDDRYIPTVGLDYQYVRRTNANR--KELIHSYELGGGKEQSKMITIPISK 116 Query: 112 DNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQ---KTGESRSGKQRVPR 168 N +LVLDLSKP+ + E+ R Q+++ + + RS + + Sbjct: 117 QNFRDAFYILVLDLSKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQ 176 Query: 169 VLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSS 228 + +PD+ + P+ +++G K+D+F+ DSE RK + +TLR+LAH GASL F SS Sbjct: 177 ARFESHPDKNRVKILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASS 236 Query: 229 KSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLH 288 K+ RS +N FG + ++ +P+ I D L+++G P + Sbjct: 237 KNNDLFQNVRSIMNNALFGKTLAQYYQSEHLRPIEISLSKDELAKMGLPQISGNM----- 291 Query: 289 AKNPFDLWKKVFEKVFPHESTRERKELKDPVK-DPQFSEPLIDSIRAQKDQELDQYKRE 346 + +KKV ++ FP + +DP++ +F E IDSIRA+KD+E+ +E Sbjct: 292 --TYLEAFKKVIQETFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKE 348 >gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa] Length = 203 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 27/244 (11%), Positives = 66/244 (27%), Gaps = 49/244 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ + + V + Sbjct: 116 KLLVGN-----------------------------------KSDLTSN-----KVVSYEQ 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K T + ++ ++ + + G Sbjct: 136 AKAFADEIGIPFMETSAKDATNVEQAFMAMSAAIKDRMASQPAMNNAKPSTVQFKGQPVE 195 Query: 272 SQIG 275 + G Sbjct: 196 QKGG 199 >gi|450635|gb|AAA50159.1| GTP binding protein Length = 218 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 66/234 (28%), Gaps = 35/234 (14%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDGEESFNNVKQWLSEIDRYASDNVN 116 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVI-CK 210 L + R + D+ R V + Sbjct: 117 KLLVGNKCDLEANRAVSNIET---------------------ADL-----EANRAVSNIE 150 Query: 211 TLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI 264 T + A G I TS+K T + ++ + + + + I Sbjct: 151 TAKAFADGIGIPFIETSAKDATNVEQAFMAMTASIKDRMASQPANNARPPTVQI 204 >gi|1370164|emb|CAA98159.1| RAB1B [Lotus japonicus] Length = 194 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 67/237 (28%), Gaps = 52/237 (21%) Query: 40 RTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWELGG 97 + +G GK+ +LLRF + E+ T+ +++ R + +W+ G Sbjct: 1 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDF--KIRTVEQDAKTIKLQIWDTAG 58 Query: 98 GISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTG 157 + + +++V D++ + ++ L L Sbjct: 59 QERFRTITSSYYRGAH----GIIIVYDVTDEESF-NNVKQWLSEIDRYASDNVNKLLVGN 113 Query: 158 ESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAH 217 K D+ + R V +T + A Sbjct: 114 -----------------------------------KSDLTAN-----RAVSYETAKAFAD 133 Query: 218 FYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAI---PAGSDSL 271 G + TS+K T + ++ + + + + I P G S Sbjct: 134 EIGIPFMETSAKDATNVEQAFMAMAASIKNRMASQPANNARPPTVNISGKPVGQSSG 190 >gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase Length = 184 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 65/219 (29%), Gaps = 49/219 (22%) Query: 32 EDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDI 89 + V +G GK+ +L RF + +K T+ +E+ Sbjct: 13 PRGSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIK 70 Query: 90 AHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKV 149 A +W+ G + + +LV D++K +E +E L R+ + Sbjct: 71 AQIWDTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSN 125 Query: 150 CAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVIC 209 +++VG+K D+ R V Sbjct: 126 IV-----------------------------------IMLVGNKSDLRH-----LRAVPT 145 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGT 248 R A G S I TS+ T + + I + Sbjct: 146 DEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184 >gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus] gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus] Length = 217 Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 75/256 (29%), Gaps = 51/256 (19%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPK 87 +D + V +G GK+ +L RF + +K T+ +E+ Sbjct: 2 GSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 A +W+ G + + +LV D++K +E +E L R+ + Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHAD 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + +++VG+K D+ R V Sbjct: 115 QNIV-----------------------------------IMLVGNKSDLRH-----LRAV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 R A S I TS+ T + + I + K I D Sbjct: 135 PTDEARAFAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQKQIRNDADN--DPSPS 192 Query: 268 SDSLSQIGPPVATEVD 283 D++ I D Sbjct: 193 GDNVKAISIAPTDSSD 208 >gi|109103158|ref|XP_001089840.1| PREDICTED: similar to RAB1, member RAS oncogene family isoform 3 [Macaca mulatta] Length = 204 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 31/253 (12%), Positives = 68/253 (26%), Gaps = 58/253 (22%) Query: 37 PSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWE 94 + +G GK+ +LLRF + E+ T+ +++ R + +W+ Sbjct: 8 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQIWD 65 Query: 95 LGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQ 154 G + + +++V D++ + ++ L + L Sbjct: 66 TAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYASENVNKLL 120 Query: 155 KTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRF 214 + K+ V T + Sbjct: 121 VGNKCDLTT----------------------------------------KKVVDYTTAKE 140 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 A G + TS+K+ T + +S + P + + K S +I Sbjct: 141 FADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK---------SNVKI 191 Query: 275 GPPVATEVDIGTL 287 + G Sbjct: 192 QSTPVKQSGGGCC 204 >gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus] Length = 217 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 42/256 (16%), Positives = 75/256 (29%), Gaps = 51/256 (19%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPK 87 +D + V +G GK+ +L RF + +K T+ +E+ Sbjct: 2 GSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 A +W+ G + + +LV D++K +E +E L R+ + Sbjct: 60 IKAQIWDTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHAD 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + +++VG+K D+ R V Sbjct: 115 QNIV-----------------------------------IMLVGNKSDLRH-----LRAV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 R A S I TS+ T + + I + K I D Sbjct: 135 PTDEARAFAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQKQIRNDADN--DPSPS 192 Query: 268 SDSLSQIGPPVATEVD 283 D++ I D Sbjct: 193 GDNVKAISIAPTDSSD 208 >gi|156551916|ref|XP_001607057.1| PREDICTED: similar to putative rab11 [Nasonia vitripennis] Length = 215 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 74/255 (29%), Gaps = 52/255 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ ++ Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLRELRDHADQNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAK 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + K I P P ++ Sbjct: 141 TFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDTIRPQ---NVEP 197 Query: 274 IGPPVATEVDIGTLH 288 I + Sbjct: 198 IDVKPTMSSEGMRKQ 212 >gi|3024501|sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus] Length = 216 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 72/254 (28%), Gaps = 51/254 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLW 93 + + +G GK+ IL RF + +K T+ +E+ A +W Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVE--GKTVKAQIW 66 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K + ++ L R+ + + Sbjct: 67 DTAGQERYRAITSAYYRGA----VGALLVYDITKRQTF-DNVQRWLRELRDHADSNIVIM 121 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 G+K D+ R V Sbjct: 122 MA-----------------------------------GNKSDLNH-----LRAVSEDDGG 141 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 L+ G S + TS+ T + K+ I + K+++ + A G + Sbjct: 142 ALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQ--GTT 199 Query: 274 IGPPVATEVDIGTL 287 I + Sbjct: 200 INVADTSGNTKKGC 213 >gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding [Arabidopsis thaliana] gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana] gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana] gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana] Length = 217 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 72/239 (30%), Gaps = 50/239 (20%) Query: 32 EDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDI 89 D + V +G GK+ +L RF + + +K T+ +E+ Sbjct: 6 ADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD--KIVK 63 Query: 90 AHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKV 149 A +W+ G + + +LV D+++ E +E L R+ + Sbjct: 64 AQIWDTAGQERYRAITSAYYRGA----VGALLVYDVTRHVTF-ENVERWLKELRDHTDAN 118 Query: 150 CAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVIC 209 ++ VG+K D+ R V Sbjct: 119 IV-----------------------------------IMFVGNKADLRH-----LRAVST 138 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 + + A + TS+ + + + + + K++ P A+P G Sbjct: 139 EDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIG-DDPAALPKGQ 196 >gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza sativa] Length = 202 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 27/221 (12%), Positives = 61/221 (27%), Gaps = 49/221 (22%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLNEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + E R V + Sbjct: 116 KLLVGNKCDLA----------------------------------------ENRVVSYEA 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 + LA G + TS+K T + K+ + + Sbjct: 136 GKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQ 176 >gi|24648682|ref|NP_732610.1| Rab-protein 1 CG3320-PA, isoform A [Drosophila melanogaster] gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster] gi|7300727|gb|AAF55873.1| CG3320-PA, isoform A [Drosophila melanogaster] Length = 205 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 36/245 (14%), Positives = 75/245 (30%), Gaps = 49/245 (20%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 SSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D + + ++ L Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDCTDQESF-NNVKQWLEEIERYAC 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L +VG+K D+ K+ V Sbjct: 115 ENVNKL-----------------------------------LVGNKSDLTT-----KKVV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 T A G + TS+KS T + ++ + P S +TD + + I G Sbjct: 135 DHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQG 194 Query: 268 SDSLS 272 + Sbjct: 195 RPVEN 199 >gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa] Length = 215 Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 74/254 (29%), Gaps = 50/254 (19%) Query: 32 EDAHFPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDI 89 D + + +G GK+ +L RF + +K T+ +E+ Sbjct: 6 ADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDD--KIVK 63 Query: 90 AHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKV 149 A +W+ G + + +LV D+++ E +E L R+ + Sbjct: 64 AQIWDTAGQERYRAITSAYYRGA----VGALLVYDVTRHVTF-ENVERWLKELRDHTDAN 118 Query: 150 CAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVIC 209 ++ VG+K D+ R V Sbjct: 119 IV-----------------------------------IMFVGNKADLRH-----LRAVST 138 Query: 210 KTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSD 269 + + A + TS+ + + + + + K++ P A+P G Sbjct: 139 EDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSRKALDIG-DDPAALPKGET 197 Query: 270 SLSQIGPPVATEVD 283 + +V Sbjct: 198 INVKDDVSAVKKVG 211 >gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum] gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba] gi|738937|prf||2001457E GTP-binding protein gi|1098295|prf||2115367C small GTP-binding protein Length = 217 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 75/243 (30%), Gaps = 52/243 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + + +K T+ +E+ + A +W Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD--SKVIKAQIW 67 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+++ E ++ L RN + Sbjct: 68 DTAGQERYRAITSAYYRGA----VGALLVYDVTRHATF-ENVDRWLKELRNHTDSNIV-- 120 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ V + + Sbjct: 121 ---------------------------------VMLVGNKADLRH-----LVAVSTEDGK 142 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A + TS+ T + + + + + K++ + ++PA + Sbjct: 143 SYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKTVEGAENGNASVPA---KGEK 199 Query: 274 IGP 276 I Sbjct: 200 IDL 202 >gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norvegicus] Length = 231 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 34/256 (13%), Positives = 75/256 (29%), Gaps = 29/256 (11%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQES-YANVKQWLQEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L +S ++V + P L VGS + Sbjct: 116 KLLVGNKSDLTTKKVV---------DNTTAKVSRPALAVGSGS-HVPSPLLPLLLSLFFP 165 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + P + S L Sbjct: 166 WQEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNL--------- 216 Query: 272 SQIGPPVATEVDIGTL 287 +I G Sbjct: 217 -KIDSTPVKSASGGCC 231 >gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabidopsis thaliana] Length = 221 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 27/241 (11%), Positives = 64/241 (26%), Gaps = 50/241 (20%) Query: 37 PSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLWE 94 + +G GK+ +LLRF + ++ T+ +++ R + +W+ Sbjct: 25 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDF--KIRTVEQDGKTIKLQIWD 82 Query: 95 LGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQ 154 G + + +++ D++ + ++ L + L Sbjct: 83 TAGQERFRTITSSYYRGAH----GIIVTYDVTDLESF-NNVKQWLNEIDRYASENVNKLL 137 Query: 155 KTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRF 214 + Q + V +T + Sbjct: 138 VGNKCDLTSQ----------------------------------------KVVSTETAKA 157 Query: 215 LAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQI 274 A G + TS+K+ T + ++ + + P G Q Sbjct: 158 FADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAG-GSKPPTVQIRGQPVNQQS 216 Query: 275 G 275 G Sbjct: 217 G 217 >gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max] Length = 217 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 34/243 (13%), Positives = 77/243 (31%), Gaps = 52/243 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + + +K T+ +E+ R ++ A +W Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFA--TRTLDVDSKVIKAQIW 67 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+++ E ++ L RN + Sbjct: 68 DTAGQERYRAITSAYYRGA----VGALLVYDVTRQATF-ENVDRWLKELRNHTDANIV-- 120 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ V + + Sbjct: 121 ---------------------------------VMLVGNKSDLRH-----LVAVSTEDGK 142 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A + TS+ T + + + + + K++ + ++PA + Sbjct: 143 SYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAVEVAENGTTSVPA---KGEK 199 Query: 274 IGP 276 I Sbjct: 200 IDL 202 >gi|401686|sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 gi|170661|gb|AAA34255.1| small G protein Length = 203 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 28/221 (12%), Positives = 67/221 (30%), Gaps = 49/221 (22%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTVELDGKVIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLAEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L +VG+K D+ K+ V + Sbjct: 116 KL-----------------------------------LVGNKSDLTG-----KKVVDYQA 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPK 252 + A G + TS+K+ T + ++ + + Sbjct: 136 AKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQ 176 >gi|157358689|emb|CAO66374.1| unnamed protein product [Vitis vinifera] Length = 217 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 34/235 (14%), Positives = 72/235 (30%), Gaps = 50/235 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + + +K T+ +E+ A +W Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD--KVVKAQIW 67 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+++ E +E L R+ + Sbjct: 68 DTAGQERYRAITSAYYRGA----VGALLVYDVTRHVTF-ENVERWLKELRDHTDSNIV-- 120 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + + Sbjct: 121 ---------------------------------IMLVGNKADLRH-----LRAVSTEDAK 142 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 A + TS+ + + + + + K++ P A+P G Sbjct: 143 AFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIG-DDPAALPKGQ 196 >gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis] Length = 203 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 25/242 (10%), Positives = 66/242 (27%), Gaps = 49/242 (20%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDF--KIRTVEQDGKTMKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ ++ ++ L Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIIVYDVTDQDSF-NNVKQWLNEIDRYASDNVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L + +K+ V +T Sbjct: 116 KLLVGNKCDLT----------------------------------------DKKVVSYET 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS K+ + ++ ++ + + + G Sbjct: 136 AKAFADEIGIPFMETSLKNALNVGQAFMAMSASIKDRMASQPAANNARPATVQIRGQPVE 195 Query: 272 SQ 273 + Sbjct: 196 QK 197 >gi|147834751|emb|CAN75016.1| hypothetical protein [Vitis vinifera] gi|157338370|emb|CAO39414.1| unnamed protein product [Vitis vinifera] Length = 218 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 72/234 (30%), Gaps = 50/234 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + + +K T+ +E+ A +W Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVD--GKVIKAQIW 67 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+++ E ++ L RN + Sbjct: 68 DTAGQERYRAITSAYYRGA----VGALLVYDVTRHATF-ENVDRWLKELRNHTDPNIV-- 120 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ V + + Sbjct: 121 ---------------------------------VMLVGNKSDLRH-----LVAVSTEDGK 142 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSIS-TDPSKPLAIPA 266 A + TS+ T + + + + + KS+ D ++PA Sbjct: 143 TYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGDEGAASSVPA 196 >gi|15219955|ref|NP_173136.1| RAB11 (ARABIDOPSIS RAB GTPASE HOMOLOG A1B); GTP binding [Arabidopsis thaliana] gi|3024526|sp|Q39222|RB11B_ARATH Ras-related protein Rab11 gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana] gi|451860|gb|AAA32872.1| small GTP-binding protein gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana] gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana] Length = 216 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 71/243 (29%), Gaps = 49/243 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + + +K T+ +E+ A +W Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVD--GKVVKAQIW 67 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+++ E ++ L +N + Sbjct: 68 DTAGQERYRAITSAYYRGA----VGALLVYDVTRRATF-ENVDRWLKELKNHTDPNIV-- 120 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ V + + Sbjct: 121 ---------------------------------VMLVGNKSDLRH-----LLAVPTEDGK 142 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A + TS+ T + + + + + K + ++P G + Sbjct: 143 SYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKGEKIEVK 202 Query: 274 IGP 276 Sbjct: 203 NDV 205 >gi|147802502|emb|CAN73117.1| hypothetical protein [Vitis vinifera] Length = 215 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 72/235 (30%), Gaps = 49/235 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDE--TAKPTLALEYTFGRRARGHNTPKDIAHLW 93 + + +G GK+ IL RF + +K T+ +E+ A +W Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVE--GKTVKAQIW 66 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K E ++ L R+ + + Sbjct: 67 DTAGQERYRAITSAYYRGA----VGALLVYDITKRQTF-ENVQRWLRELRDHADSNIVIM 121 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 G+K D+ R V + Sbjct: 122 MA-----------------------------------GNKSDLNH-----LRAVSGDDAQ 141 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGS 268 LA G S + TS+ + K+ I + K+++ + + +P G+ Sbjct: 142 ILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQEAASINLPHGT 196 >gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum] Length = 218 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 72/243 (29%), Gaps = 51/243 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + + +K T+ +E+ A +W Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVD--GKVIKAQIW 67 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+++ + E +E L R+ + Sbjct: 68 DTAGQERYRAITSAYYRGA----VGALLVYDVTRHSTF-ENVERWLRELRDHTDPNIV-- 120 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ V + + Sbjct: 121 ---------------------------------VMLVGNKSDLRH-----LVAVSTEDGK 142 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A + TS+ T + + + + + K++ T + + Sbjct: 143 SFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSKKAMETSDDGAASAVPSK--GEK 200 Query: 274 IGP 276 I Sbjct: 201 IDV 203 >gi|226486|prf||1515250A rab1B protein Length = 201 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 69/256 (26%), Gaps = 59/256 (23%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTVTSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ K+ V T Sbjct: 116 KLLVGN-----------------------------------KSDLTT-----KKVVDNTT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A G + TS+K+ T + ++ + P + S L Sbjct: 136 AKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNL--------- 186 Query: 272 SQIGPPVATEVDIGTL 287 +I G Sbjct: 187 -KIDSTPVKSASGGCC 201 >gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca coagulata] Length = 215 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 73/246 (29%), Gaps = 52/246 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 65 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ ++ Sbjct: 66 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLRELRDHADQNIV-- 118 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 119 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 140 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A G S I TS+ T + + I + K I P P ++ Sbjct: 141 TFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQKQIRDPPEGDTIRPT---NVEA 197 Query: 274 IGPPVA 279 I Sbjct: 198 IDVKPT 203 >gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus oryzae] Length = 523 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 53/375 (14%), Positives = 103/375 (27%), Gaps = 53/375 (14%) Query: 19 SRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAK----------- 67 + + ++ P ++ + +G + L Sbjct: 27 KKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFLDTLSADTSDPSLSNDRRKGRLP 85 Query: 68 ---PTLALEYTFGRRARGHNTPK-DIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVLV 122 AL YT+ + L S + L++ +TA +V VV++ Sbjct: 86 PVANQFALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTAQSVPETLVVIL 145 Query: 123 LDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHK---------- 172 LD S P + + R V K + + R Sbjct: 146 LDWSDPWTWVRRLREWVRLLR-HVLISLDDETKIVMEETMTEWRDRKRGMDPSSTGAQGL 204 Query: 173 ---------DYPDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAH 217 E +P+ +V D + E+ I + +R + Sbjct: 205 TSSGGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEEFDFILQFMRTILL 264 Query: 218 FYGASLIFTSSK--SETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIG 275 +GASLI+T+ + S + K D K + +P+ DS +I Sbjct: 265 KHGASLIYTTPFLVNSLQSLLHSSLGIHSLLKRQSLKHNVIDRDK-ILVPSNWDSWGKIR 323 Query: 276 PPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQ 335 G A + + E + + + P + S A Sbjct: 324 IIREGFDMEGVSTAWSI--EIQDPPEPL-----SGSSMDDAKPQGENAAGLDDGTSAVAI 376 Query: 336 KDQELDQYKREQAKS 350 +Q + KR+ + + Sbjct: 377 FEQTIKDPKRDASMT 391 >gi|68402952|ref|XP_695291.1| PREDICTED: similar to Rab1-prov protein [Danio rerio] Length = 201 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 30/256 (11%), Positives = 67/256 (26%), Gaps = 59/256 (23%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQESF-NNVKQWLQEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ K+ V Sbjct: 116 KLLVGN-----------------------------------KCDLTT-----KKVVDYTA 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A + TS+KS T + ++ + P + + S Sbjct: 136 AKEFADSLSIPFLETSAKSSTNVEQAFMTMAAEIKKRMGPGATAGAEK----------SN 185 Query: 272 SQIGPPVATEVDIGTL 287 +I G Sbjct: 186 LKIHSTPVKTSSGGCC 201 >gi|41055496|ref|NP_957436.1| hypothetical protein LOC394117 [Danio rerio] gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio] Length = 201 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 71/256 (27%), Gaps = 59/256 (23%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTIKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + +++V D++ + + ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQES-YNNVKQWLQEIDRYASENVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L K D+ K+ V T Sbjct: 116 KLLVGN-----------------------------------KCDLTT-----KKVVDYTT 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSL 271 + A + TS+K+ T + ++ + P +T KP Sbjct: 136 AKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG-ATTGGDKPNL-------- 186 Query: 272 SQIGPPVATEVDIGTL 287 +I + G Sbjct: 187 -KIESTPVRQSGGGCC 201 >gi|109511883|ref|XP_001061706.1| PREDICTED: similar to Ras-related protein Rab-1B [Rattus norvegicus] Length = 288 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 74/278 (26%), Gaps = 61/278 (21%) Query: 14 AAEVRSRESRTDEEEAEEED--AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPT 69 E+ + E A + + +G GK+ +LLRF + E+ T Sbjct: 68 LLELTAGSRLGATERATAAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYIST 127 Query: 70 LALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPN 129 + +++ R + +W+ G + + +++V D++ Sbjct: 128 IGVDF--KIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDVTDQE 181 Query: 130 ALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLI 189 + + ++ L + L +S Sbjct: 182 S-YANVKQWLQEIDRYASENVNKLLVGNKSDLTT-------------------------- 214 Query: 190 VGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTE 249 K+ V T + A G + TS+K+ T + ++ + Sbjct: 215 --------------KKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRM 260 Query: 250 RPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTL 287 P + S L +I G Sbjct: 261 GPGAASGGERPNL----------KIDSTPVKSASGGCC 288 >gi|119479611|ref|XP_001259834.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] gi|119407988|gb|EAW17937.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] Length = 505 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 50/373 (13%), Positives = 99/373 (26%), Gaps = 53/373 (14%) Query: 18 RSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETA----------- 66 + + ++ P ++ + +G + + Sbjct: 14 SKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFIETLSADTSDPTLISEKRRGRL 72 Query: 67 ---KPTLALEYTFGRRARGHNTPK-DIAHLWELGGGI-SLSDLVQIPITADNVSFLSVVL 121 AL YT+ + L S + L++ +T +V VV+ Sbjct: 73 PPVANQFALGYTYHDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTPQSVPETLVVI 132 Query: 122 VLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDY------- 174 +LD S P + + R V K + R D Sbjct: 133 LLDWSDPWTWVRRLREWVRLLR-HVLISLDDETKIVMEEIMTEWKDRKRGMDSGAQGLAS 191 Query: 175 ---------PDRELISPFPVPLLIVGSKFDIF------QDFDSEKRKVICKTLRFLAHFY 219 E +P+ +V D + E+ I + +R + + Sbjct: 192 SGGPVTIPPGPGEWDEGLGIPMCVVCQGADKIEKLEKEHGWREEEFDFILQFMRTILLKH 251 Query: 220 GASLIFTSSKSETTMS--KSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPP 277 GASL +T++ ++ S + K D K + +P DS +I Sbjct: 252 GASLTYTTTFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPPNWDSWGKIRII 310 Query: 278 VATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKD 337 G A + + E + + D + + + Sbjct: 311 REGFDMEGVSTAWSI--EIQDAPE----PLTGAVDQPQDDSAMGAEDGTSAV----TIFE 360 Query: 338 QELDQYKREQAKS 350 Q + KR A + Sbjct: 361 QTITDPKRNTAMA 373 >gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis thaliana] Length = 216 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 71/243 (29%), Gaps = 49/243 (20%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + + +K T+ +E+ A +W Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVD--GKVVKAQIW 67 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+++ E ++ L +N + Sbjct: 68 DTAGQERYRAITSAYYRGA----VGALLVYDVTRRATF-ENVDRWLKELKNHTDPNIV-- 120 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ V + + Sbjct: 121 ---------------------------------VMLVGNKSDLRH-----LLAVPTEDGK 142 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQ 273 A + TS+ T + + + + + K + ++P G + Sbjct: 143 SYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKGEKIEVK 202 Query: 274 IGP 276 Sbjct: 203 NDV 205 >gi|17558550|ref|NP_503397.1| RAB family member (rab-1) [Caenorhabditis elegans] gi|3806150|gb|AAC69218.1| Rab family protein 1 [Caenorhabditis elegans] Length = 205 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 30/260 (11%), Positives = 68/260 (26%), Gaps = 59/260 (22%) Query: 30 EEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPK 87 + + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 2 AAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKT 59 Query: 88 DIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVE 147 +W+ G + + +++V D++ ++ L Sbjct: 60 IKLQIWDTAGQERFRTITSSYYRGAH----GIIVVYDITDQETF-NNVKQWLQEIDRYAC 114 Query: 148 KVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKV 207 + L + KR V Sbjct: 115 ENVNKLLVGNKCDLT----------------------------------------AKRAV 134 Query: 208 ICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAG 267 + + A G + TS+KS T + ++ + P+ G Sbjct: 135 ETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRM----------GPVQGAGG 184 Query: 268 SDSLSQIGPPVATEVDIGTL 287 + + G + G Sbjct: 185 APGVRITGSQPVQDKKSGGC 204 >gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15] Length = 201 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 74/231 (32%), Gaps = 49/231 (21%) Query: 34 AHFPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAH 91 + + +G GK+ +LLRF + E+ T+ +++ R + Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTVKLQ 60 Query: 92 LWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCA 151 +W+ G + + + +V D++ ++ ++ L + Sbjct: 61 IWDTAGQERFRTITSSYYRGAH----GICVVYDVTDMDSF-NNVKQWLQEIDRYATEGVN 115 Query: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 L +VG+K D+ +K+ V Sbjct: 116 KL-----------------------------------LVGNKSDMA-----DKKVVEYTV 135 Query: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPL 262 + A G + TS+KS T + ++ + + + +T P+ P+ Sbjct: 136 AKEFADSLGIPFLETSAKSATNVEQAFLTMARQIKERMGTTTANTKPTVPI 186 >gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp Length = 191 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 65/213 (30%), Gaps = 49/213 (23%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ A +W Sbjct: 26 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--GKTIKAQIW 83 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D++K +E +E L R+ + Sbjct: 84 DTAGQERYRAITSAYYRGA----VGALLVYDIAKHLT-YENVERWLKELRDHADSNIV-- 136 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V R Sbjct: 137 ---------------------------------IMLVGNKSDLRH-----LRAVPTDEAR 158 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAF 246 A G S I TS+ T + + I + Sbjct: 159 AFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191 >gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa] gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A] Length = 214 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 40/256 (15%), Positives = 74/256 (28%), Gaps = 54/256 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERDET--AKPTLALEYTFGRRARGHNTPKDIAHLW 93 + V +G GK+ +L RF + +K T+ +E+ + A +W Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVD--SKTIKAQIW 63 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + +LV D+SK E + L R+ ++ Sbjct: 64 DTAGQERYRAITSAYYRGA----VGALLVYDISKGVTF-ENVNRWLKELRDHADQNIV-- 116 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +++VG+K D+ R V + + Sbjct: 117 ---------------------------------IMLVGNKSDLRH-----LRAVPTEDAK 138 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLS- 272 A S I TS+ T + + I + K+ + P G +LS Sbjct: 139 KFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFD---NGPSGSNEGHQNLSG 195 Query: 273 -QIGPPVATEVDIGTL 287 I Sbjct: 196 QSISLSQTANDPQAKS 211 >gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1] gi|119404296|gb|EAW14672.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1] Length = 207 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 72/226 (31%), Gaps = 49/226 (21%) Query: 36 FPSQRTVFFMGSKAGGKTTILLRFLERD--ETAKPTLALEYTFGRRARGHNTPKDIAHLW 93 + + +G GK+ +LLRF + E+ T+ +++ R + +W Sbjct: 11 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF--KIRTIELDGKTVKLQIW 68 Query: 94 ELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAAL 153 + G + + + +V D++ ++ ++ L + L Sbjct: 69 DTAGQERFRTITSSYYRGAH----GICVVYDVTDMDSF-NNVKQWLQEIDRYATEGVNKL 123 Query: 154 QKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLR 213 +VG+K D+ +K+ V + Sbjct: 124 -----------------------------------LVGNKSDM-----EDKKVVEYTVAK 143 Query: 214 FLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPS 259 A G + TS+K+ + + ++ + + +++ P+ Sbjct: 144 EFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKPT 189 Database: /data/curated/sequences/fasta/proteomes/nr_So.fa Posted date: Dec 27, 2007 11:11 AM Number of letters in database: 1,979,780,658 Number of sequences in database: 5,742,111 Lambda K H 0.314 0.160 0.425 Lambda K H 0.267 0.0491 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,209,489,054 Number of Sequences: 5742111 Number of extensions: 332834368 Number of successful extensions: 1833030 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 18600 Number of HSP's successfully gapped in prelim test: 20736 Number of HSP's that attempted gapping in prelim test: 1720310 Number of HSP's gapped (non-prelim): 65936 length of query: 358 length of database: 1,979,780,658 effective HSP length: 134 effective length of query: 224 effective length of database: 1,210,337,784 effective search space: 271115663616 effective search space used: 271115663616 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 79 (34.8 bits)