Query Ver_Hs_NP_057225.1_DNCLI1 Command /cluster/toolkit/production/bioprogs/hhpred/hhsearch -cal -cpu 4 -v 1 -i /cluster/toolkit/production/tmp/production/96180/s_NP_057225.hhm -d /cluster/toolkit/production/databases/hhpred/new_dbs/scop70_1.71/db/scop.hhm -o /cluster/toolkit/production/tmp/production/96180/s_NP_057225.hhr -p 20 -P 20 -Z 100 -B 100 -seq 1 -aliw 80 -local -ssm 2 -norealign -sc 1 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1wmsa_ c.37.1.8 (A:) Rab9a {H 98.9 8.7E-09 8.3E-13 75.6 11.2 160 70-305 9-172 (174) 2 d1r2qa_ c.37.1.8 (A:) Rab5a {H 98.9 2.2E-09 2.1E-13 79.7 8.1 160 69-305 8-168 (170) 3 d1g16a_ c.37.1.8 (A:) Rab-rela 98.9 3.3E-09 3.1E-13 78.4 8.6 159 69-305 4-163 (166) 4 d1oiva_ c.37.1.8 (A:) Rab11a { 98.9 8.3E-09 7.9E-13 75.7 9.8 159 70-305 9-168 (168) 5 d1ukvy_ c.37.1.8 (Y:) GTPase Y 98.8 1.1E-08 1E-12 75.0 8.0 156 70-304 9-167 (204) 6 d1d5ca_ c.37.1.8 (A:) Rab6 {Ma 98.8 6.1E-09 5.9E-13 76.6 6.8 158 70-304 4-162 (162) 7 d1m7ba_ c.37.1.8 (A:) RhoE (RN 98.7 6.7E-08 6.4E-12 69.6 9.9 166 70-301 5-173 (179) 8 d1c1ya_ c.37.1.8 (A:) Rap1A {H 98.6 4.5E-08 4.3E-12 70.8 7.5 160 69-304 5-165 (167) 9 d1mh1__ c.37.1.8 (-) Rac {Huma 98.6 4.8E-08 4.6E-12 70.5 7.3 174 69-308 7-182 (183) 10 d3raba_ c.37.1.8 (A:) Rab3a {R 98.6 7.8E-08 7.4E-12 69.1 8.4 159 70-305 8-167 (169) 11 d2ngra_ c.37.1.8 (A:) CDC42 {H 98.6 2.1E-07 2E-11 66.1 9.7 178 69-312 5-184 (191) 12 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 98.6 1.3E-07 1.3E-11 67.6 8.6 168 68-301 3-172 (177) 13 d1kao__ c.37.1.8 (-) Rap2a {Hu 98.5 1.1E-07 1E-11 68.1 7.9 160 69-304 5-164 (167) 14 d1u8za_ c.37.1.8 (A:) Ras-rela 98.5 1.3E-07 1.3E-11 67.6 6.8 160 70-305 7-166 (168) 15 d1upta_ c.37.1.8 (A:) ADP-ribo 98.4 9.1E-07 8.7E-11 61.9 10.6 159 69-304 7-165 (169) 16 d1ky3a_ c.37.1.8 (A:) Rab-rela 98.4 4.6E-07 4.4E-11 63.8 8.5 164 69-305 4-171 (175) 17 d1moza_ c.37.1.8 (A:) ADP-ribo 98.4 3.7E-07 3.5E-11 64.5 7.8 176 47-304 2-177 (182) 18 d1i2ma_ c.37.1.8 (A:) Ran {Hum 98.4 2.5E-07 2.4E-11 65.7 6.8 158 69-308 5-165 (170) 19 d1svsa1 c.37.1.8 (A:32-60,A:18 98.4 4.4E-06 4.2E-10 57.2 12.5 167 69-304 4-191 (195) 20 d1ksha_ c.37.1.8 (A:) ADP-ribo 98.4 4.3E-07 4.1E-11 64.1 7.1 160 69-305 4-163 (165) 21 d1mkya2 c.37.1.8 (A:173-358) P 98.3 1.8E-06 1.7E-10 59.9 8.6 172 60-304 1-181 (186) 22 d1wf3a1 c.37.1.8 (A:3-180) GTP 98.3 4.9E-07 4.7E-11 63.7 5.7 172 63-312 2-177 (178) 23 d1e0sa_ c.37.1.8 (A:) ADP-ribo 98.3 9.7E-07 9.2E-11 61.7 7.2 155 69-304 14-172 (173) 24 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 98.2 4.4E-06 4.2E-10 57.2 10.0 162 69-304 5-167 (170) 25 d1udxa2 c.37.1.8 (A:157-336) O 98.2 2.8E-06 2.7E-10 58.5 7.6 166 69-308 3-171 (180) 26 d1r8sa_ c.37.1.8 (A:) ADP-ribo 98.1 9.8E-07 9.4E-11 61.6 5.1 159 69-304 2-160 (160) 27 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 98.1 9E-06 8.6E-10 55.1 9.5 164 69-305 4-168 (184) 28 d1ctqa_ c.37.1.8 (A:) cH-p21 R 98.1 2.1E-06 2E-10 59.4 6.3 158 70-304 6-163 (166) 29 d1fzqa_ c.37.1.8 (A:) ADP-ribo 98.0 4.3E-07 4.1E-11 64.1 1.5 175 52-304 2-176 (176) 30 d1wb1a4 c.37.1.8 (A:1-179) Elo 98.0 5.1E-06 4.9E-10 56.8 6.1 157 69-304 7-173 (179) 31 d1azsc2 c.37.1.8 (C:36-66,C:20 97.9 0.0001 9.7E-09 48.0 12.2 164 70-304 8-213 (223) 32 d1mkya1 c.37.1.8 (A:2-172) Pro 97.9 6.7E-06 6.4E-10 56.0 6.1 157 69-304 2-163 (171) 33 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 97.9 1.2E-05 1.2E-09 54.2 6.4 157 70-304 16-185 (186) 34 d1m2ob_ c.37.1.8 (B:) SAR1 {Ba 97.8 3.9E-05 3.7E-09 50.8 8.6 133 70-271 3-167 (167) 35 d1etu_1 c.37.1.8 (5-200) Elong 97.8 2.1E-05 2E-09 52.6 7.0 150 69-300 9-195 (196) 36 d1egaa1 c.37.1.8 (A:4-182) GTP 97.8 1.3E-05 1.3E-09 54.0 5.3 156 67-304 5-170 (179) 37 d1jnya3 c.37.1.8 (A:4-227) Elo 97.8 1.5E-05 1.5E-09 53.5 5.5 149 69-293 5-197 (224) 38 d1svia_ c.37.1.8 (A:) Probable 97.7 0.00019 1.8E-08 46.1 10.4 154 69-304 25-193 (195) 39 d1f60a3 c.37.1.8 (A:2-240) Elo 97.7 1.4E-05 1.3E-09 53.8 4.2 153 69-293 8-198 (239) 40 d1d2ea3 c.37.1.8 (A:55-250) El 97.6 6.6E-05 6.3E-09 49.2 7.2 154 69-304 5-193 (196) 41 d1exma3 c.37.1.8 (A:3-212) Elo 97.6 1.9E-05 1.8E-09 52.9 4.4 149 69-293 11-179 (210) 42 d1kk1a3 c.37.1.8 (A:6-200) Ini 97.5 0.00039 3.7E-08 44.0 9.9 163 69-304 7-193 (195) 43 d1puia_ c.37.1.8 (A:) Probable 97.5 0.00018 1.7E-08 46.3 8.1 168 56-300 3-183 (188) 44 d1xzpa2 c.37.1.8 (A:212-371) T 97.4 3.9E-05 3.8E-09 50.8 3.3 151 69-301 2-157 (160) 45 d1rfla_ c.37.1.8 (A:) Probable 97.1 1.4E-05 1.4E-09 53.7 -1.3 156 64-300 4-163 (172) 46 d1r5ba3 c.37.1.8 (A:215-459) E 97.0 0.00068 6.5E-08 42.4 6.1 156 69-293 26-220 (245) 47 d1nrjb_ c.37.1.8 (B:) Signal r 96.9 0.00059 5.6E-08 42.8 5.3 126 69-256 5-139 (209) 48 d1lnza2 c.37.1.8 (A:158-342) O 96.9 5.6E-05 5.4E-09 49.7 -0.1 170 69-308 3-175 (185) 49 d1g7sa4 c.37.1.8 (A:1-227) Ini 96.8 0.0017 1.7E-07 39.6 7.4 169 68-304 4-216 (227) 50 d1h65a_ c.37.1.8 (A:) Chloropl 96.2 0.0064 6.1E-07 35.8 6.9 155 50-275 15-186 (257) 51 d1oxxk2 c.37.1.12 (K:1-242) Gl 95.2 0.092 8.7E-06 27.9 9.6 170 63-286 27-198 (242) 52 d1tq4a_ c.37.1.8 (A:) Interfer 95.0 0.036 3.4E-06 30.7 7.1 142 69-277 58-202 (400) 53 d1v43a3 c.37.1.12 (A:7-245) Hy 93.7 0.12 1.1E-05 27.2 7.4 167 63-286 28-194 (239) 54 d1g2912 c.37.1.12 (1:1-240) Ma 93.4 2.1 0.0002 18.7 13.5 179 64-295 26-206 (240) 55 d1okkd2 c.37.1.10 (D:97-303) G 92.1 0.053 5.1E-06 29.5 3.8 33 65-97 4-36 (207) 56 d1ji0a_ c.37.1.12 (A:) Branche 91.5 0.31 3E-05 24.3 7.2 117 63-191 28-148 (240) 57 d1fts_2 c.37.1.10 (285-495) GT 90.6 0.09 8.6E-06 27.9 3.7 35 63-97 5-39 (211) 58 d1pzna2 c.37.1.11 (A:96-349) D 90.2 16 0.0015 12.7 14.9 145 64-286 33-188 (254) 59 d1u0la2 c.37.1.8 (A:69-293) Pr 89.6 0.91 8.7E-05 21.1 8.2 141 234-385 38-224 (225) 60 d1mv5a_ c.37.1.12 (A:) Multidr 88.6 0.17 1.6E-05 26.1 3.8 35 63-97 24-58 (242) 61 d1q12a2 c.37.1.12 (A:4-235) Ma 88.3 0.77 7.3E-05 21.7 7.0 97 63-166 22-118 (232) 62 d1ixza_ c.37.1.20 (A:) AAA dom 88.1 0.21 2E-05 25.5 4.0 52 36-87 9-62 (247) 63 d1g6oa_ c.37.1.11 (A:) Hexamer 87.0 0.2 1.9E-05 25.6 3.4 23 67-89 166-188 (323) 64 d1pf4a1 c.37.1.12 (A:321-564) 87.0 0.085 8.2E-06 28.1 1.5 35 63-97 45-79 (244) 65 d1cr1a_ c.37.1.11 (A:) Gene 4 86.9 1 1E-04 20.7 7.1 163 64-286 32-194 (277) 66 d1szpa2 c.37.1.11 (A:145-395) 86.5 6.4 0.00062 15.4 10.9 145 64-286 31-181 (251) 67 d1s4qa_ c.37.1.1 (A:) Guanylat 86.4 0.2 1.9E-05 25.6 3.2 31 67-97 2-32 (183) 68 d1y63a_ c.37.1.1 (A:) Probable 86.1 0.27 2.5E-05 24.8 3.6 25 65-89 3-27 (174) 69 d1n0ua2 c.37.1.8 (A:3-343) Elo 85.9 0.73 7E-05 21.8 5.8 128 69-197 19-186 (341) 70 d1n0wa_ c.37.1.11 (A:) DNA rep 85.8 12 0.0011 13.5 12.0 145 64-286 20-170 (242) 71 d1sgwa_ c.37.1.12 (A:) Putativ 85.8 0.18 1.7E-05 26.0 2.6 35 63-97 23-57 (200) 72 d1jj7a_ c.37.1.12 (A:) Peptide 85.8 0.23 2.2E-05 25.3 3.2 35 63-97 36-70 (251) 73 d1vpla_ c.37.1.12 (A:) Putativ 85.6 0.23 2.2E-05 25.2 3.2 35 63-97 24-58 (238) 74 d1r0wa_ c.37.1.12 (A:) Cystic 85.5 0.27 2.5E-05 24.8 3.4 35 63-97 58-92 (281) 75 d1mt0a_ c.37.1.12 (A:) Haemoly 84.4 0.22 2.1E-05 25.4 2.5 35 63-97 25-59 (241) 76 d1fnna2 c.37.1.20 (A:1-276) CD 83.6 1.3 0.00012 20.1 6.2 60 40-105 20-79 (276) 77 d1t4ga2 c.37.1.11 (A:65-322) D 83.5 17 0.0016 12.5 12.0 159 64-286 31-192 (258) 78 d3adk__ c.37.1.1 (-) Adenylate 82.9 0.32 3.1E-05 24.2 2.9 27 63-89 4-30 (194) 79 d1b0ua_ c.37.1.12 (A:) ATP-bin 82.7 0.37 3.5E-05 23.8 3.2 35 63-97 24-58 (258) 80 d1l2ta_ c.37.1.12 (A:) MJ0796 82.2 0.4 3.8E-05 23.6 3.2 35 63-97 27-61 (230) 81 d1ak2_1 c.37.1.1 (14-146,177-2 81.0 0.56 5.3E-05 22.6 3.6 25 65-89 1-25 (190) 82 d1g6ha_ c.37.1.12 (A:) MJ1267 80.8 0.42 4E-05 23.5 2.9 35 63-97 26-60 (254) 83 d1viaa_ c.37.1.2 (A:) Shikimat 79.2 0.53 5.1E-05 22.7 3.0 22 68-89 1-22 (161) 84 d1lw7a2 c.37.1.1 (A:220-411) T 78.6 0.51 4.9E-05 22.9 2.7 23 67-89 7-29 (192) 85 d1l7vc_ c.37.1.12 (C:) ABC tra 78.2 0.55 5.2E-05 22.6 2.8 34 63-97 21-54 (231) 86 d1w1wa_ c.37.1.12 (A:) Smc hea 77.8 0.82 7.8E-05 21.4 3.6 27 64-90 22-48 (427) 87 d1puja_ c.37.1.8 (A:) Probable 77.7 2.2 0.00021 18.5 5.8 47 46-94 93-139 (273) 88 d1e9ra_ c.37.1.11 (A:) Bacteri 76.9 5.8 0.00055 15.7 7.7 104 66-173 49-158 (433) 89 d1r7ra3 c.37.1.20 (A:471-735) 76.1 1.3 0.00013 20.1 4.3 54 36-89 7-63 (265) 90 d1lv7a_ c.37.1.20 (A:) AAA dom 75.2 1.8 0.00017 19.1 4.8 50 39-89 15-67 (256) 91 d1gvnb_ c.37.1.21 (B:) Plasmid 75.1 1.9 0.00018 19.0 4.8 47 42-89 8-54 (273) 92 d1g41a_ c.37.1.20 (A:) HslU {H 75.1 1.1 0.0001 20.7 3.6 30 65-94 47-76 (443) 93 d1d2na_ c.37.1.20 (A:) Hexamer 74.8 1.3 0.00013 20.0 4.0 35 52-89 28-62 (246) 94 d1jbka_ c.37.1.20 (A:) ClpB, A 73.7 2.2 0.00021 18.5 5.0 47 33-89 19-65 (195) 95 d4tmka_ c.37.1.1 (A:) Thymidyl 73.7 1.2 0.00011 20.4 3.5 23 67-89 2-24 (210) 96 d1gky__ c.37.1.1 (-) Guanylate 73.6 1.2 0.00012 20.3 3.6 62 70-131 4-82 (186) 97 d1kaga_ c.37.1.2 (A:) Shikimat 73.4 1.1 0.0001 20.7 3.2 24 66-89 1-24 (169) 98 d1np6a_ c.37.1.10 (A:) Molybdo 72.9 0.97 9.3E-05 20.9 2.9 20 70-89 5-24 (170) 99 d1nn5a_ c.37.1.1 (A:) Thymidyl 71.5 1.4 0.00014 19.8 3.5 23 67-89 3-25 (209) 100 d1u0la2 c.37.1.8 (A:69-293) Pr 70.8 1.5 0.00015 19.6 3.6 28 67-94 95-122 (225) No 1 >d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens)} Probab=98.90 E-value=8.7e-09 Score=75.58 Aligned_columns=160 Identities=25% Q ss_pred EEEEECCCCCHHHHHHHHHH---CCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHH Q ss_conf 88973699767899999742---014688865214564045000043252463686586243245556787002666455 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQG---IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLV 146 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~---~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLV 146 (523) |+|+|..++|||+|+.++.+ .+++....+.+|....+..+++ .-++.+|-..+...+..+.+..+..-. .+ T Consensus 9 ivivG~~~vGKTsLi~~~~~~~~~~~~~~t~~~~~~~~~i~~~~~--~i~l~~~d~~~~~~~~~~~~~~~~~~d----~~ 82 (174) T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGH--FVTMQIWDTAGQERFRSLRTPFYRGSD----CC 82 (174) T ss_dssp EEEECCTTSSHHHHHHHHHHSCCCC----CCSEEEEEEEEEETTE--EEEEEEEECCCCGGGHHHHGGGGTTCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECEEEEEEEECCE--EEEEEEEECCCCCHHHHHHHEECCCCE----EE T ss_conf 999817998789999998638135653331551105679999897--999998312473001021100126865----89 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 65540101368999999999999999973278988999999999999998504555666655344567666776534478 Q Ver_Hs_NP_0572 147 MLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVP 226 (523) Q Consensus 147 vIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lP 226 (523) ++|.|.+.|+++ +.++.|..-++.+..... T Consensus 83 i~v~d~~~~~s~-~~i~~~~~~i~~~~~~~~------------------------------------------------- 112 (174) T d1wmsa_ 83 LLTFSVDDSQSF-QNLSNWKKEFIYYADVKE------------------------------------------------- 112 (174) T ss_dssp EEEEETTCHHHH-HTHHHHHHHHHHHHTCSC------------------------------------------------- T ss_pred EEEEECCCHHHH-HHHHHHHHHHHHHHCCCC------------------------------------------------- T ss_conf 998635886789-999899999998710036------------------------------------------------- Q ss_pred CCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEE-ECCCCHHHHHHHHHHHHHHHC Q ss_conf 8876230058832799850741255554205774789999999999999971876888-326636789999999998760 Q Ver_Hs_NP_0572 227 LGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIY-TSVKENKNIDLVYKYIVQKLY 305 (523) Q Consensus 227 Lgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiY-TS~ke~knl~LLykYl~HrLy 305 (523) .-++|+++|++|+|. .+.....|+ ++.++-+++...+| ||++...|++-+...+..++. T Consensus 113 --------~~~~piiivgnK~Dl-----~~~~v~~ee-------~~~~~~~~~~~~~~e~Sak~~~~I~e~f~~li~~il 172 (174) T d1wmsa_ 113 --------PESFPFVILGNKIDI-----SERQVSTEE-------AQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 172 (174) T ss_dssp --------TTTSCEEEEEECTTC-----SSCSSCHHH-------HHHHHHHTTCCCEEECCTTTCTTHHHHHHHHHHHHH T ss_pred --------CCCCCEEEEECCCCC-----CCCCCCHHH-------HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH T ss_conf --------788528999514575-----435569899-------999999707982799860589888899999999995 No 2 >d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens)} Probab=98.90 E-value=2.2e-09 Score=79.65 Aligned_columns=160 Identities=21% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCC-CEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 588973699767899999742014688865-2145640450000432524636865862432455567870026664556 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRG-LEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVM 147 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~g-LeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVv 147 (523) .|+++|..++|||||+.+|.+..-...... +...|..+.-+..+..-++.+|...|...+..+.+..+.... .++ T Consensus 8 ki~liG~~~vGKSsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~~----~~i 83 (170) T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQ----AAI 83 (170) T ss_dssp EEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGHHHHHTTCS----EEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCCCC----EEE T ss_conf 8999817998799999998648015662442024543454555791799987306773011232155404652----899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 55401013689999999999999999732789889999999999999985045556666553445676667765344788 Q Ver_Hs_NP_0572 148 LVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPL 227 (523) Q Consensus 148 IvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPL 227 (523) +|.|.+.+.++ +.++.|+..++.+... T Consensus 84 ~v~d~~~~~s~-~~~~~~~~~~~~~~~~---------------------------------------------------- 110 (170) T d1r2qa_ 84 VVYDITNEESF-ARAKNWVKELQRQASP---------------------------------------------------- 110 (170) T ss_dssp EEEETTCHHHH-HHHHHHHHHHHHHSCT---------------------------------------------------- T ss_pred EEEECCCHHHH-HHHHHHHHHHHHHCCC---------------------------------------------------- T ss_conf 99625301468-9999999998750378---------------------------------------------------- Q ss_pred CCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHC Q ss_conf 876230058832799850741255554205774789999999999999971876888326636789999999998760 Q Ver_Hs_NP_0572 228 GADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLY 305 (523) Q Consensus 228 geg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrLy 305 (523) .+|+++|++|+|. .++..+-+.-++.|+-.+++-++.+|.+...+++-+..+|..+|+ T Consensus 111 ---------~~piilVgnK~Dl-----------~~~~~v~~~~~~~~~~~~~~~~~e~Sa~~~~gi~elf~~l~~~i~ 168 (170) T d1r2qa_ 111 ---------NIVIALSGNKADL-----------ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168 (170) T ss_dssp ---------TCEEEEEEECGGG-----------GGGCCSCHHHHHHHHHHTTCEEEECCTTTCTTHHHHHHHHHHTSC T ss_pred ---------CEEEEEEEEHHHH-----------HHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHC T ss_conf ---------5577753200102-----------210477989999999955981899862689788899999999832 No 3 >d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae)} Probab=98.88 E-value=3.3e-09 Score=78.44 Aligned_columns=159 Identities=22% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCC-CEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 588973699767899999742014688865-2145640450000432524636865862432455567870026664556 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRG-LEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVM 147 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~g-LeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVv 147 (523) .|+|+|..++|||||+.+|...+-...... ++..|....-...+....+.+|-..|...+..+.+..+..-. .++ T Consensus 4 Ki~ivG~~~vGKTsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~d----~~i 79 (166) T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYRGAM----GII 79 (166) T ss_dssp EEEEEESTTSSHHHHHHHHHHCCCCC-------CCEEEEEEESSSCEEEEEEECCTTGGGTSCCCHHHHTTEE----EEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHCCCCC----EEE T ss_conf 8999807998799999998648007762445411468889987584136887205783200001243326996----899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 55401013689999999999999999732789889999999999999985045556666553445676667765344788 Q Ver_Hs_NP_0572 148 LVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPL 227 (523) Q Consensus 148 IvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPL 227 (523) +|.|.+.|.++ +.+++|++.++..... T Consensus 80 ~v~d~~~~~s~-~~~~~~~~~i~~~~~~---------------------------------------------------- 106 (166) T d1g16a_ 80 LVYDITDERTF-TNIKQWFKTVNEHAND---------------------------------------------------- 106 (166) T ss_dssp EEEETTCHHHH-HTHHHHHHHHHHHSCT---------------------------------------------------- T ss_pred EEEECCCCCHH-HHHHHHHHHHHHCCCC---------------------------------------------------- T ss_conf 99851565338-8999999998612689---------------------------------------------------- Q ss_pred CCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHC Q ss_conf 876230058832799850741255554205774789999999999999971876888326636789999999998760 Q Ver_Hs_NP_0572 228 GADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLY 305 (523) Q Consensus 228 geg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrLy 305 (523) .+|++||.+|+| |+++.-..+| ++.|+-+++...+-||++...+++-+...|.+.++ T Consensus 107 ---------~~piivv~nK~D----l~~~~v~~~e--------~~~~~~~~~~~~~e~Sa~~g~gv~~lf~~l~~~i~ 163 (166) T d1g16a_ 107 ---------EAQLLLVGNKSD----METRVVTADQ--------GEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 163 (166) T ss_dssp ---------TCEEEEEEECTT----CTTCCSCHHH--------HHHHHHHHTCCEEECBTTTTBSHHHHHHHHHHHHH T ss_pred ---------CCCEEEEEECHH----HHHCCCCHHH--------HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH T ss_conf ---------851666763102----2200675889--------99999965993999961589888899999999999 No 4 >d1oiva_ c.37.1.8 (A:) Rab11a {Human (Homo sapiens)} Probab=98.85 E-value=8.3e-09 Score=75.73 Aligned_columns=159 Identities=21% Q ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCC-CEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 88973699767899999742014688865-21456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQGIEEYKKGRG-LEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~~e~~kKg~g-LeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) |+|+|+.++|||||+.+|.+.+-..+... .+..+....-...+..-.+.+|-..|...+..+.+..+..-.. ++| T Consensus 9 i~ivG~~~vGKSSLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~~~~~~~~~~~d~----~i~ 84 (168) T d1oiva_ 9 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVG----ALL 84 (168) T ss_dssp EEEESSTTSSHHHHHHHHHHSCCCSSCCCCSSEEEEEEEEEETTEEEEEEEEEECSCCCCHHHHHHHHTTEEE----EEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCCCCE----EEE T ss_conf 9998369987999999986580343655326533422789988948999985067830123555776227878----999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |.|.+.+ .-++.+.+|+.-++....... T Consensus 85 v~d~~~~-~s~~~i~~~~~~i~~~~~~~~--------------------------------------------------- 112 (168) T d1oiva_ 85 VYDIAKH-LTYENVERWLKELRDHADSNI--------------------------------------------------- 112 (168) T ss_dssp EEETTCH-HHHHTHHHHHHHHHHHSCTTC--------------------------------------------------- T ss_pred EEEECCC-CHHHHHHHHHHHHHHHCCCCE--------------------------------------------------- T ss_conf 9984263-016889999999986148953--------------------------------------------------- Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHC Q ss_conf 76230058832799850741255554205774789999999999999971876888326636789999999998760 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLY 305 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrLy 305 (523) |++||++|+| |+++..-..|+ .|.||-++++..+.||+|...|++-+...|..++| T Consensus 113 ----------piiivgnK~D----l~~~~~v~~~~-------~~~~~~~~~~~~~e~Sak~g~~i~e~f~~ii~~i~ 168 (168) T d1oiva_ 113 ----------VIMLVGNKSD----LRHLRAVPTDE-------ARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 168 (168) T ss_dssp ----------EEEEEEECTT----CGGGCCSCHHH-------HHHHHHHHTCEEEECCTTTCTTHHHHHHHHHHHHC T ss_pred ----------EEEEEEECCC----HHHCCCCCHHH-------HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHC T ss_conf ----------8996110001----22203779899-------99999963993899971689787899999999709 No 5 >d1ukvy_ c.37.1.8 (Y:) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae)} Probab=98.77 E-value=1.1e-08 Score=75.00 Aligned_columns=156 Identities=18% Q ss_pred EEEEECCCCCHHHHHHHHHH---CCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHH Q ss_conf 88973699767899999742---014688865214564045000043252463686586243245556787002666455 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQG---IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLV 146 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~---~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLV 146 (523) |+|+|+.++|||||+.++.. .+++....+.+|.+..+..+++ ...+.+|-..|...+..+.+..+.--. .+ T Consensus 9 I~iiG~~~vGKTSLi~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~--~~~i~i~D~~g~e~~~~~~~~~~~~ad----~i 82 (204) T d1ukvy_ 9 LLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGK--TVKLQIWDTAGQERFRTITSSYYRGSH----GI 82 (204) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCTTCCCSSCCCEEEEEEEETTE--EEEEEEECCTTTTTTTCCCHHHHTTCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCE--EEEEEEECCCCCCHHHHHHHHHHCCCC----EE T ss_conf 889816997799999998648105762452112466889988886--887443026773012345677614797----47 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 65540101368999999999999999973278988999999999999998504555666655344567666776534478 Q Ver_Hs_NP_0572 147 MLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVP 226 (523) Q Consensus 147 vIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lP 226 (523) |+|.|.+.+..+-+ ++.|+.-+..+. T Consensus 83 ilvfd~~d~~S~~~-~~~~~~~i~~~~----------------------------------------------------- 108 (204) T d1ukvy_ 83 IIVYDVTDQESFNG-VKMWLQEIDRYA----------------------------------------------------- 108 (204) T ss_dssp EEEEETTCHHHHHH-HHHHHHHHHHHS----------------------------------------------------- T ss_pred EEEEECCCHHHHHH-HHHHHHHHHHHH----------------------------------------------------- T ss_conf 99985166012335-689999986531----------------------------------------------------- Q ss_pred CCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH Q ss_conf 887623005883279985074125555420577478999999999999997187688832663678999999999876 Q Ver_Hs_NP_0572 227 LGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 227 Lgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrL 304 (523) ...+|++||++|+|. +++..+-..-.+.||-.+++..+-||++...|++-+...|...+ T Consensus 109 --------~~~~~iiivgnK~D~-----------~~~~~v~~~e~~~~~~~~~~~~~e~SAk~~~gi~e~f~~i~~~i 167 (204) T d1ukvy_ 109 --------TSTVLKLLVGNKCDL-----------KDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 167 (204) T ss_dssp --------CTTCEEEEEEECTTC-----------TTTCCSCHHHHHHHHHHTTCCEEECCTTTCTTHHHHHHHHHHHH T ss_pred --------CCCCEEEEEEECCCC-----------HHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH T ss_conf --------024102455411340-----------01025418999999996198189995168988899999999999 No 6 >d1d5ca_ c.37.1.8 (A:) Rab6 {Malaria parasite (Plasmodium falciparum)} Probab=98.76 E-value=6.1e-09 Score=76.60 Aligned_columns=158 Identities=22% Q ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCC-CEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 88973699767899999742014688865-21456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQGIEEYKKGRG-LEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~~e~~kKg~g-LeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) |+|+|..++|||||+.+|.+-+-...-.. ++..|....=...+..-++.+|...|...+....+..+..-. .+++ T Consensus 4 i~i~G~~~vGKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~d----~~i~ 79 (162) T d1d5ca_ 4 LVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQERFRSLIPSYIRDSA----AAIV 79 (162) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCTTCCCCCCCEEEEEEEEETTEEEEEEEEECCCSGGGGGGHHHHHTTCS----EEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCCCC----EEEE T ss_conf 899817998799999998648015661331554677789730881699986237652033456677632683----8999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |.|.+.++++ +.+.+|+.-++....... T Consensus 80 v~d~~~~~s~-~~~~~~l~~i~~~~~~~~--------------------------------------------------- 107 (162) T d1d5ca_ 80 VYDITNRQSF-ENTTKWIQDILNERGKDV--------------------------------------------------- 107 (162) T ss_dssp EEETTCHHHH-HTHHHHHHHHHHHHTTSS--------------------------------------------------- T ss_pred EEECCCCCCH-HHHHHHHHHHHHHCCCCE--------------------------------------------------- T ss_conf 9744666777-899999999975124865--------------------------------------------------- Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH Q ss_conf 7623005883279985074125555420577478999999999999997187688832663678999999999876 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrL 304 (523) |++||++|+|.. ++-++....++.++-++++..+.+|++...+++-|.+-|.-+| T Consensus 108 ----------piilvgnK~Dl~-----------~~~~v~~~~~~~~~~~~~~~~~~~Sa~~g~gv~~lf~~i~~~l 162 (162) T d1d5ca_ 108 ----------IIALVGNKTDLG-----------DLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTASKL 162 (162) T ss_dssp ----------EEEEEEECGGGG-----------GGCCSCHHHHHHHHHHTTCEEEECBTTTTBSCHHHHHHHHHCC T ss_pred ----------EEEEEEECCCCC-----------CCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHC T ss_conf ----------789975214653-----------2245488999999996499299997268968789999999839 No 7 >d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus)} Probab=98.68 E-value=6.7e-08 Score=69.55 Aligned_columns=166 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 88973699767899999742014688865214564045000043252463686586243245556787002666455655 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvIv 149 (523) |+|+|+.++|||+|+.++..-+-......--.....+.=...+..-++.+|-..|...+..+.+.....-+ .++|| T Consensus 5 I~iiG~~~vGKTsli~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~~~~~~~~~~~d----~~iiv 80 (179) T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSD----AVLIC 80 (179) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEEEEEECSSCEEEEEEEEECCSGGGTTTGGGGCTTCS----EEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHCCCC----EEEEE T ss_conf 99970699878999999862823666343367621343201331102686114432100000056632786----57999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 40101368999999999999999973278988999999999999998504555666655344567666776534478887 Q Ver_Hs_NP_0572 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLGA 229 (523) Q Consensus 150 lDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLge 229 (523) -|++.++++-.-++.|...++.. T Consensus 81 ydv~~~~Sf~~i~~~~~~~~~~~--------------------------------------------------------- 103 (179) T d1m7ba_ 81 FDISRPETLDSVLKKWKGEIQEF--------------------------------------------------------- 103 (179) T ss_dssp EETTCHHHHHHHHHTHHHHHHHH--------------------------------------------------------- T ss_pred EECCCCHHHHHHHHHHHHHHHHH--------------------------------------------------------- T ss_conf 80686035788988777777640--------------------------------------------------------- Q ss_pred CCCCCCCCCCEEEEEECCCHHH-HHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEE-ECCCCHHH-HHHHHHHHH Q ss_conf 6230058832799850741255-554205774789999999999999971876888-32663678-999999999 Q Ver_Hs_NP_0572 230 DTLTHNLGIPVLVVCTKCDAIS-VLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIY-TSVKENKN-IDLVYKYIV 301 (523) Q Consensus 230 g~Lt~NLGiPivVVctKsD~ie-~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiY-TS~ke~kn-l~LLykYl~ 301 (523) .-.+|++||++|+|.-+ ......-..+.+..+-..-.+.+|-++||..+| ||++...| ++-+...+. T Consensus 104 -----~~~~piilvgnK~DL~~~~~~~~~~~~~~~~~Vs~~e~~~la~~~~~~~y~E~SA~t~~n~v~~~F~~~~ 173 (179) T d1m7ba_ 104 -----CPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVAT 173 (179) T ss_dssp -----CTTCEEEEEEECGGGGGCHHHHHHHHTTTCCCCCHHHHHHHHHHHTCSEEEECBTTTBHHHHHHHHHHHH T ss_pred -----CCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH T ss_conf -----2674157875266632103456654430376589899999999708952898750368840899999999 No 8 >d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens)} Probab=98.61 E-value=4.5e-08 Score=70.76 Aligned_columns=160 Identities=19% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 58897369976789999974201468886521456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) .|+|+|+.++|||||+.+|.+-+-..+-...-.......-.-....-.+.+|-..|...+..+.+....--. +++| T Consensus 5 Ki~iiG~~~vGKTsLi~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~D~~g~~~~~~~~~~~~~~~~----~~i~ 80 (167) T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQ----GFAL 80 (167) T ss_dssp EEEEECSTTSSHHHHHHHHHHCCCCCSCCCCSEEEEEEEEESSSCEEEEEEEEECSSCSSTTHHHHHHHHCS----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHCCCC----EEEE T ss_conf 899981799878999999862733554564002026889987141456777622566302355576506886----8999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |.|++.++++-. +.+|..-+..+... T Consensus 81 v~d~~~~~s~~~-~~~~~~~~~~~~~~----------------------------------------------------- 106 (167) T d1c1ya_ 81 VYSITAQSTFND-LQDLREQILRVKDT----------------------------------------------------- 106 (167) T ss_dssp EEETTCHHHHHT-HHHHHHHHHHHHCC----------------------------------------------------- T ss_pred EECCCCCCCHHH-HHHHHHHHHHHCCC----------------------------------------------------- T ss_conf 830676642688-99999999975068----------------------------------------------------- Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEE-ECCCCHHHHHHHHHHHHHHH Q ss_conf 76230058832799850741255554205774789999999999999971876888-32663678999999999876 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIY-TSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiY-TS~ke~knl~LLykYl~HrL 304 (523) -.+|+++|++|+|. .++..+-.+..+.++.+++...+| ||++.+.|++-+...|.-.+ T Consensus 107 -------~~~piilvgnK~Dl-----------~~~~~v~~~e~~~~~~~~~~~~~~e~Sak~~~~v~elf~~l~~~i 165 (167) T d1c1ya_ 107 -------EDVPMILVGNKCDL-----------EDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQI 165 (167) T ss_dssp -------SCCCEEEEEECTTC-----------GGGCCSCHHHHHHHHHHTTSCEEEECBTTTTBSHHHHHHHHHHHH T ss_pred -------CCEEEEEEEECCCC-----------CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH T ss_conf -------97089998504780-----------001478989999999984497078885058988889999999985 No 9 >d1mh1__ c.37.1.8 (-) Rac {Human (Homo sapiens)} Probab=98.60 E-value=4.8e-08 Score=70.53 Aligned_columns=174 Identities=15% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 58897369976789999974201468886521456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) .|+|+|+.++|||||+.+|.+-+-..........+....-.-.+..-.+.+|-..|...+..+.+..+...+ ++++ T Consensus 7 Ki~iiG~~~vGKTsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~l~i~d~~g~~~~~~~~~~~~~~~~----~~il 82 (183) T d1mh1__ 7 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTD----VSLI 82 (183) T ss_dssp EEEEECSTTSSHHHHHHHHHHSSCCSSCCCCSCCEEEEEEEETTEEEEEEEECCCCSGGGTTTGGGGCTTCS----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEECCCCCHHHHHHCCCCCCCCC----EEEE T ss_conf 999980799879999999861733665344056678889998006877665115431011000102123321----7899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |.|.+.++++-+-.+.|+..++... T Consensus 83 v~di~~~~s~~~~~~~~~~~~~~~~------------------------------------------------------- 107 (183) T d1mh1__ 83 CFSLVSPASFENVRAKWYPEVRHHC------------------------------------------------------- 107 (183) T ss_dssp EEETTCHHHHHHHHHTHHHHHHHHS------------------------------------------------------- T ss_pred EEECCCCHHHHHHHHHHHHHHHHCC------------------------------------------------------- T ss_conf 9743560258888788788875237------------------------------------------------------- Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHH-HHHHHHHHHHHCCEEEE-ECCCCHHHHHHHHHHHHHHHCC Q ss_conf 762300588327998507412555542057747899999-99999999971876888-3266367899999999987606 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFF-QSHIRKFCLRYGAALIY-TSVKENKNIDLVYKYIVQKLYG 306 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfI-qq~LR~icL~YGAaLiY-TS~ke~knl~LLykYl~HrLyg 306 (523) -++|+++|++|+|..+.-+-.....+.....| ....+.+|=++|+..++ ||++...|++-++..+..-+.- T Consensus 108 -------~~~piiivgnK~D~~~~~~~~~~~~~~~~~~i~~~e~~~~a~~~~~~~~~e~Sa~~~~gI~e~f~~~ir~~l~ 180 (183) T d1mh1__ 108 -------PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLC 180 (183) T ss_dssp -------TTSCEEEEEECHHHHTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSEEEECCTTTCTTHHHHHHHHHHHHSC T ss_pred -------CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCC T ss_conf -------8817999860667511013556677641376777899999997189507997604787878999999999608 Q ss_pred CC Q ss_conf 55 Q Ver_Hs_NP_0572 307 FP 308 (523) Q Consensus 307 fp 308 (523) -| T Consensus 181 p~ 182 (183) T d1mh1__ 181 PP 182 (183) T ss_dssp CC T ss_pred CC T ss_conf 78 No 10 >d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus)} Probab=98.60 E-value=7.8e-08 Score=69.12 Aligned_columns=159 Identities=18% Q ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCC-CEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 88973699767899999742014688865-21456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQGIEEYKKGRG-LEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~~e~~kKg~g-LeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) |+|+|..++|||||+.+|.+.+-...... .+..+....-...........|...|...+..+-+........ +++ T Consensus 8 I~ivG~~~vGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~----~i~ 83 (169) T d3raba_ 8 ILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMG----FIL 83 (169) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGHHHHHTTTTTCCE----EEE T ss_pred EEEEECCCCCHHHHHHHHHCCEECCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHEE----EEE T ss_conf 8998369987999999985680034521123421136777645820367872167630233454443211101----133 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |.|.+.+.. +.++..|...+.... T Consensus 84 v~d~~~~~s-~~~~~~~~~~i~~~~------------------------------------------------------- 107 (169) T d3raba_ 84 MYDITNEES-FNAVQDWSTQIKTYS------------------------------------------------------- 107 (169) T ss_dssp EEETTCHHH-HHTHHHHHHHHHHHC------------------------------------------------------- T ss_pred EEECCCCCH-HHHHHHHHHHHHHCC------------------------------------------------------- T ss_conf 320222210-345566655532101------------------------------------------------------- Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHC Q ss_conf 76230058832799850741255554205774789999999999999971876888326636789999999998760 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLY 305 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrLy 305 (523) ...+|+++|++|+|. .++..+.++..+.+|-.+|...+.||++...+++-+...|...+. T Consensus 108 ------~~~~pii~v~nK~D~-----------~~~~~~~~~~~~~~~~~~~~~~~e~Sa~~~~gi~e~f~~l~~~i~ 167 (169) T d3raba_ 108 ------WDNAQVLLVGNKCDM-----------EDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVIC 167 (169) T ss_dssp ------CSCCEEEEEEECTTC-----------GGGCCSCHHHHHHHHHHHTCEEEECBTTTTBSHHHHHHHHHHHHH T ss_pred ------CCCCEEEEHHHHCCH-----------HHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH T ss_conf ------377326850121241-----------330044289999999964980899862689888899999999985 No 11 >d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens)} Probab=98.56 E-value=2.1e-07 Score=66.15 Aligned_columns=178 Identities=18% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 58897369976789999974201468886521456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) .|+|+|+.++|||||+.++..-+-...........+.+.-...+..-++.+|-..|...+..+.+..+..-+ .+++ T Consensus 5 Ki~iiG~~~vGKSsli~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~i~~~i~D~~g~~~~~~~~~~~~~~~~----~~il 80 (191) T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTD----VFLV 80 (191) T ss_dssp EEEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGTTTGGGGCTTCS----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHCCCCE----EEEE T ss_conf 899980799778999999871854665355202335778762664799997314676214466454205527----8999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |.|.+.|+++-+--+.|...++.+.. T Consensus 81 v~d~~~~~Sf~~~~~~~~~~~~~~~~------------------------------------------------------ 106 (191) T d2ngra_ 81 CFSVVSPSSFENVKEKWVPEITHHCP------------------------------------------------------ 106 (191) T ss_dssp EEETTCHHHHHHHHHTHHHHHHHHCT------------------------------------------------------ T ss_pred EEECCCHHHHHHHHHHHHHHHHHCCC------------------------------------------------------ T ss_conf 87146855899988877888752378------------------------------------------------------ Q ss_pred CCCCCCCCCCCEEEEEECCCHHH-HHHHCCCCCHHHHHHHHHHHHHHHHHHCC-EEEEECCCCHHHHHHHHHHHHHHHCC Q ss_conf 76230058832799850741255-55420577478999999999999997187-68883266367899999999987606 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDAIS-VLEKEHDYRDEHFDFFQSHIRKFCLRYGA-ALIYTSVKENKNIDLVYKYIVQKLYG 306 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~ie-~LEKe~~y~dE~fDfIqq~LR~icL~YGA-aLiYTS~ke~knl~LLykYl~HrLyg 306 (523) ++|+++|++|+|..+ ...-+.-..+.+..+-....+.+|-++++ ..|-||++...|++=+...+...... T Consensus 107 --------~ipiilvgnK~Dl~~~~~~~~~~~~~~~r~v~~~~~~~~a~~~~~~~~~E~SA~tg~gI~e~f~~~i~~~l~ 178 (191) T d2ngra_ 107 --------KTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 (191) T ss_dssp --------TCCEEEEEECGGGGGCHHHHHHHHTTTCCCCCHHHHHHHHHHTTCSCEEECCTTTCTTHHHHHHHHHHHHTS T ss_pred --------CCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHC T ss_conf --------743899740524332202678887404677677899999998089708998604787778999999999854 Q ss_pred CCCCCC Q ss_conf 555655 Q Ver_Hs_NP_0572 307 FPYKIP 312 (523) Q Consensus 307 fpf~~~ 312 (523) -|...+ T Consensus 179 ~~~~~~ 184 (191) T d2ngra_ 179 PPEPKK 184 (191) T ss_dssp CCSTTC T ss_pred CCCCCC T ss_conf 778887 No 12 >d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens)} Probab=98.56 E-value=1.3e-07 Score=67.56 Aligned_columns=168 Identities=20% Q ss_pred CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 65889736997678999997420146888652145640450000432524636865862432455567870026664556 Q Ver_Hs_NP_0572 68 KNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVM 147 (523) Q Consensus 68 KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVv 147 (523) |-|+|+|+.++|||||+.+|.+-+-..........+..+.-...+..-.+.+|-..|...+..+.+..+.... .++ T Consensus 3 ~KI~iiG~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~~~i~~~~~~~~~~i~D~~g~~~~~~~~~~~~~~~~----~~i 78 (177) T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDYDRLRPLSYPDTD----VIL 78 (177) T ss_dssp EEEEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGTTTGGGGCTTCS----EEE T ss_pred EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCCHHCCCCCCC----EEE T ss_conf 5899982699879999999862733565355035567899864593676678534775322311000110455----489 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 55401013689999999999999999732789889999999999999985045556666553445676667765344788 Q Ver_Hs_NP_0572 148 LVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPL 227 (523) Q Consensus 148 IvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPL 227 (523) +|.|.+.+.+| +.+..|......+... T Consensus 79 lv~d~~~~~sf-~~~~~~~~~~~~~~~~---------------------------------------------------- 105 (177) T d1kmqa_ 79 MCFSIDSPDSL-ENIPEKWTPEVKHFCP---------------------------------------------------- 105 (177) T ss_dssp EEEETTCHHHH-HHHHHTHHHHHHHHST---------------------------------------------------- T ss_pred EEEECCCHHHH-HHHHHHHHHHHHHCCC---------------------------------------------------- T ss_conf 99807854579-9998766899863279---------------------------------------------------- Q ss_pred CCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHH-HHHHHHHHHHHCCEEEE-ECCCCHHHHHHHHHHHH Q ss_conf 8762300588327998507412555542057747899999-99999999971876888-32663678999999999 Q Ver_Hs_NP_0572 228 GADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFF-QSHIRKFCLRYGAALIY-TSVKENKNIDLVYKYIV 301 (523) Q Consensus 228 geg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfI-qq~LR~icL~YGAaLiY-TS~ke~knl~LLykYl~ 301 (523) .+|+++|++|+|..+.-+-+....+.....| ....+.+|-++|.--+| ||.+...|++-+...+. T Consensus 106 ---------~~piiivgnK~Dl~~~~~~~~~~~~~~~~~i~~~~~~~~a~~~~~~~~~e~Sak~~~gv~e~f~~~~ 172 (177) T d1kmqa_ 106 ---------NVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 172 (177) T ss_dssp ---------TSCEEEEEECGGGTTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSEEEECCTTTCTTHHHHHHHHH T ss_pred ---------CEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH T ss_conf ---------7089998605675533025688886522468989999999972894279875058878889999999 No 13 >d1kao__ c.37.1.8 (-) Rap2a {Human (Homo sapiens)} Probab=98.54 E-value=1.1e-07 Score=68.13 Aligned_columns=160 Identities=20% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 58897369976789999974201468886521456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) .|+|+|..++|||||+.+|.+-+-...-.....-+....-...+..-++.+|-..|...+..+.+..+..-. .+++ T Consensus 5 kI~iiG~~~vGKTsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~~----~ii~ 80 (167) T d1kao__ 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQ----GFIL 80 (167) T ss_dssp EEEEECCTTSSHHHHHHHHHHSCCCSCCCTTCCEEEEEEEEETTEEEEEEEEECCCTTCCHHHHHHHHHHCS----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHCCCC----EEEE T ss_conf 899980799878999999864812676465201357999998357899998514674312344576512663----6899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |.|.+.+.++-.--+.|...++..- T Consensus 81 v~d~~~~~s~~~~~~~~~~~~~~~~------------------------------------------------------- 105 (167) T d1kao__ 81 VYSLVNQQSFQDIKPMRDQIIRVKR------------------------------------------------------- 105 (167) T ss_dssp EEETTCHHHHHHHHHHHHHHHHHTT------------------------------------------------------- T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC------------------------------------------------------- T ss_conf 9875311232103477899997417------------------------------------------------------- Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH Q ss_conf 7623005883279985074125555420577478999999999999997187688832663678999999999876 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrL 304 (523) ..++|++||++|+|. .++..+...-++.|+-.+|+..|.+|++...|++-+...|.-++ T Consensus 106 ------~~~~p~iiv~nK~Dl-----------~~~~~v~~~e~~~~~~~~~~~~~e~Sak~g~~v~~lf~~i~~~~ 164 (167) T d1kao__ 106 ------YEKVPVILVGNKVDL-----------ESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164 (167) T ss_dssp ------TSCCCEEEEEECGGG-----------GGGCCSCHHHHHHHHHHHTSCEEEECTTCHHHHHHHHHHHHHHH T ss_pred ------CCCCEEEEEEEECCC-----------CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH T ss_conf ------888638999850354-----------44455798999999996499289997158978889999999972 No 14 >d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus)} Probab=98.48 E-value=1.3e-07 Score=67.58 Aligned_columns=160 Identities=18% Q ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 88973699767899999742014688865214564045000043252463686586243245556787002666455655 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvIv 149 (523) |+|+|+.++|||||+.++.+-.-........-..........+..-.+.+|-..|...+..+.+..+.--. .+++| T Consensus 7 i~iiG~~~vGKTsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~d----~~i~v 82 (168) T d1u8za_ 7 VIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGE----GFLCV 82 (168) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCSCCCTTCCEEEEEEEEETTEEEEEEEEECCC---CHHHHHHHHHHCS----EEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCHHHHCCCCC----EEEEE T ss_conf 99982799878999999864832677245326788999998116875478742356420100010002442----79999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 40101368999999999999999973278988999999999999998504555666655344567666776534478887 Q Ver_Hs_NP_0572 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLGA 229 (523) Q Consensus 150 lDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLge 229 (523) .|++.+.++-.-.+.|...++... T Consensus 83 ~d~~~~~s~~~i~~~~~~~~~~~~-------------------------------------------------------- 106 (168) T d1u8za_ 83 FSITEMESFAATADFREQILRVKE-------------------------------------------------------- 106 (168) T ss_dssp EETTCHHHHHHHHHHHHHHHHHHC-------------------------------------------------------- T ss_pred EEECCCCCHHHHHHHHHHHHHHCC-------------------------------------------------------- T ss_conf 861473216899988899985307-------------------------------------------------------- Q ss_pred CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHC Q ss_conf 6230058832799850741255554205774789999999999999971876888326636789999999998760 Q Ver_Hs_NP_0572 230 DTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLY 305 (523) Q Consensus 230 g~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrLy 305 (523) +-++|+++|++|+|. .++..+.++.++.++-+++...+-+|.+.+.|++-+-..|+..+. T Consensus 107 -----~~~~piiiv~nK~Dl-----------~~~~~v~~~~~~~~~~~~~~~~~e~Sak~~~~i~e~f~~l~~~i~ 166 (168) T d1u8za_ 107 -----DENVPFLLVGNKSDL-----------EDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIR 166 (168) T ss_dssp -----CTTSCEEEEEECGGG-----------GGGCCSCHHHHHHHHHHHTCEEEECCTTTCTTHHHHHHHHHHHHH T ss_pred -----CCCCEEEEEEECCCC-----------CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH T ss_conf -----999389999505670-----------011577889999999964995899972589888899999999996 No 15 >d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1} Probab=98.45 E-value=9.1e-07 Score=61.86 Aligned_columns=159 Identities=21% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 58897369976789999974201468886521456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) .|+|+|..++|||||+.+|.+-+-...+...+..+..+...+.. +.+|-+.|..++....+........ +++ T Consensus 7 ki~iiG~~nvGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~d~~~~~~~~~~~~~~~~~~~~----~~~ 78 (169) T d1upta_ 7 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLK----FQVWDLGGLTSIRPYWRCYYSNTDA----VIY 78 (169) T ss_dssp EEEEECSTTSSHHHHHHHHHHSSCCCCCCCSSEEEEEEEETTEE----EEEEEECCCGGGGGGGGGGCTTCSE----EEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCEEEEEEEECCCEE----EEEEECCCHHHHHHHHHHHHHHHHH----HHH T ss_conf 89998179987999999985781213321212889986236758----9998625412333344443321125----655 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |.|...+..+-...+.|..++ T Consensus 79 v~~~~d~~~~~~~~~~~~~~~----------------------------------------------------------- 99 (169) T d1upta_ 79 VVDSCDRDRIGISKSELVAML----------------------------------------------------------- 99 (169) T ss_dssp EEETTCCTTHHHHHHHHHHHH----------------------------------------------------------- T ss_pred HHHHHCCCCHHHHHHHHHHHH----------------------------------------------------------- T ss_conf 554423445788999999987----------------------------------------------------------- Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH Q ss_conf 7623005883279985074125555420577478999999999999997187688832663678999999999876 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrL 304 (523) ....-..+|++||++|+|. .-.....++.+.....++-+++..+|.||++...+++=+..+|..++ T Consensus 100 --~~~~~~~~p~iiv~nK~Dl--------~~~~~~~~i~~~~~~~~~~~~~~~~~~~SA~~g~gi~e~~~~l~~~i 165 (169) T d1upta_ 100 --EEEELRKAILVVFANKQDM--------EQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 165 (169) T ss_dssp --TCGGGTTCEEEEEEECTTS--------TTCCCHHHHHHHHTGGGCTTSCEEEEECCTTTCTTHHHHHHHHHHHH T ss_pred --HCCCCCCCCEEEEECCCCC--------CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH T ss_conf --3013355100243201473--------00037889999988888622894699985367988899999999998 No 16 >d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae)} Probab=98.42 E-value=4.6e-07 Score=63.85 Aligned_columns=164 Identities=25% Q ss_pred EEEEEECCCCCHHHHHHHHHH---CCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHH Q ss_conf 588973699767899999742---01468886521456404500004325246368658624324555678700266645 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQG---IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTL 145 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~---~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TL 145 (523) .|+|+|..++|||||+.+|.+ .+.+....+.++..........+... ...|...+...+..+.+..+.... . T Consensus 4 ki~ivG~~~vGKStLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~ 78 (175) T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVAT-MQVWDTAGQERFQSLGVAFYRGAD----C 78 (175) T ss_dssp EEEEECCTTSSHHHHHHHHHHSCCCTTC---CCCSCEEEEECCSSSCCEE-EEEECCC----------CCSTTCC----E T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCEEEE-EEECCCCHHHHHHCCCHHHHHHHH----H T ss_conf 99998079988999999986580134513404642468899984854799-974366202343100001333223----0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 56554010136899999999999999997327898899999999999999850455566665534456766677653447 Q Ver_Hs_NP_0572 146 VMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVV 225 (523) Q Consensus 146 VvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~l 225 (523) ++++.|.+.+.. ++.++.|..-+..+..... T Consensus 79 ~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~------------------------------------------------ 109 (175) T d1ky3a_ 79 CVLVYDVTNASS-FENIKSWRDEFLVHANVNS------------------------------------------------ 109 (175) T ss_dssp EEEEEETTCHHH-HHTHHHHHHHHHHHHCCSC------------------------------------------------ T ss_pred EEEEEEECCCCH-HHHHHHHHHHHHHHHHHCC------------------------------------------------ T ss_conf 021111014310-6788999888998841103------------------------------------------------ Q ss_pred CCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEE-ECCCCHHHHHHHHHHHHHHH Q ss_conf 88876230058832799850741255554205774789999999999999971876888-32663678999999999876 Q Ver_Hs_NP_0572 226 PLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIY-TSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 226 PLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiY-TS~ke~knl~LLykYl~HrL 304 (523) +..+|++||++|+|..+ +.....+.-++.++-.+|..-+| ||.+...+++-+...|.-.. T Consensus 110 ---------~~~~piiiv~nK~Dl~~----------~~~~~~~~~~~~~~~~~~~~~~~e~Sa~~g~gv~~lf~~i~~~~ 170 (175) T d1ky3a_ 110 ---------PETFPFVILGNKIDAEE----------SKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSA 170 (175) T ss_dssp ---------TTTCCEEEEEECTTSCG----------GGCCSCHHHHHHHHHHTTSCCEEEEBTTTTBSHHHHHHHHHHHH T ss_pred ---------CCCCEEEEEECCCCCCC----------CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH T ss_conf ---------58955999840335410----------01432089999999970895089975168977889999999999 Q ss_pred C Q ss_conf 0 Q Ver_Hs_NP_0572 305 Y 305 (523) Q Consensus 305 y 305 (523) + T Consensus 171 ~ 171 (175) T d1ky3a_ 171 L 171 (175) T ss_dssp H T ss_pred H T ss_conf 9 No 17 >d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1} Probab=98.41 E-value=3.7e-07 Score=64.53 Aligned_columns=176 Identities=18% Q ss_pred HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCC Q ss_conf 79999998864144542578765889736997678999997420146888652145640450000432524636865862 Q Ver_Hs_NP_0572 47 NLWSCILSEVSTRSRSKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDL 126 (523) Q Consensus 47 nlWssiL~~v~t~~~~klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~ 126 (523) |+.|+|.+..-+..+ .-.|+|+|..++|||||+.+|.+.+-.......+..+..+...+. ...+|.+.|.. T Consensus 2 ~~~~~~~~~~~~~~~-----~~ki~ivG~~n~GKSSLi~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~~~~ 72 (182) T d1moza_ 2 NIFSSMFDKLWGSNK-----ELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNL----KLNVWDLGGQT 72 (182) T ss_dssp HHHHHHHGGGTTCSS-----CEEEEEEEETTSSHHHHHHHTCCSEEEEECSSTTCCEEEEEETTE----EEEEEEEC--- T ss_pred HHHHHHHHHHCCCCC-----EEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCC----CEEECCCCCCH T ss_conf 158899997437882-----279999817998689999987501100111002457898750475----21210465211 Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC Q ss_conf 43245556787002666455655401013689999999999999999732789889999999999999985045556666 Q Ver_Hs_NP_0572 127 YHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPA 206 (523) Q Consensus 127 ~~~~LLK~aLt~~si~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~ 206 (523) .+..+.+....... .+++|.|.+.+..+.+-.+.|..+. T Consensus 73 ~~~~~~~~~~~~~~----~~i~v~d~~~~~~~~~~~~~~~~~~------------------------------------- 111 (182) T d1moza_ 73 SIRPYWRCYYADTA----AVIFVVDSTDKDRMSTASKELHLML------------------------------------- 111 (182) T ss_dssp -CCTTGGGTTTTEE----EEEEEEETTCTTTHHHHHHHHHHHT------------------------------------- T ss_pred HHHHHHHHHHHCCC----EEEEEEEECCCCCHHHHHHHHHHHH------------------------------------- T ss_conf 23455565410232----3578986034567778999999998------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC Q ss_conf 55344567666776534478887623005883279985074125555420577478999999999999997187688832 Q Ver_Hs_NP_0572 207 SPQRRNTASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTS 286 (523) Q Consensus 207 s~~~~~~~~~~~~d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS 286 (523) .......+|++||++|+|. .-.....+..++.-...+-...-..|.|| T Consensus 112 ------------------------~~~~~~~~p~iiv~nK~Dl--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~S 159 (182) T d1moza_ 112 ------------------------QEEELQDAALLVFANKQDQ--------PGALSASEVSKELNLVELKDRSWSIVASS 159 (182) T ss_dssp ------------------------TSSTTSSCEEEEEEECTTS--------TTCCCHHHHHHHTTTTTCCSSCEEEEEEB T ss_pred ------------------------HHHHCCCCCEEEEEECCCC--------CCCCCHHHHHHHHHHHHHHCCCCEEEEEE T ss_conf ------------------------7530168634899852587--------32146567899987775402793699985 Q ss_pred CCCHHHHHHHHHHHHHHH Q ss_conf 663678999999999876 Q Ver_Hs_NP_0572 287 VKENKNIDLVYKYIVQKL 304 (523) Q Consensus 287 ~ke~knl~LLykYl~HrL 304 (523) ++...+++-+..+|...+ T Consensus 160 a~~g~gi~e~~~~l~~~i 177 (182) T d1moza_ 160 AIKGEGITEGLDWLIDVI 177 (182) T ss_dssp GGGTBTHHHHHHHHHHHH T ss_pred CCCCCCHHHHHHHHHHHH T ss_conf 357988899999999997 No 18 >d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens)} Probab=98.40 E-value=2.5e-07 Score=65.70 Aligned_columns=158 Identities=24% Q ss_pred EEEEEECCCCCHHHHHHHHHH---CCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHH Q ss_conf 588973699767899999742---01468886521456404500004325246368658624324555678700266645 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQG---IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTL 145 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~---~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TL 145 (523) .|+++|..++|||||+.+|.+ .+.+...-+.++....+..++.. -.+.+|-..|...+..+.+.....-. . T Consensus 5 KI~iiG~~~vGKTsll~~~~~~~~~~~~~~T~~~~~~~~~~~~~~~~--~~~~i~D~~g~~~~~~~~~~~~~~~~----~ 78 (170) T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP--IKFNVWDTAGQEKFGGLRDGYYIQAQ----C 78 (170) T ss_dssp EEEEEECTTSSHHHHHHTTC-----CCEEEETTEEEEEEEECBTTCC--EEEEEEECTTHHHHSSCGGGGTTTCC----E T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCE--EEEEECCCCCCHHHHHHHHHHCCCCC----E T ss_conf 99998179987999999986481166623337874567887538927--99997157641012221123205775----7 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 56554010136899999999999999997327898899999999999999850455566665534456766677653447 Q Ver_Hs_NP_0572 146 VMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVV 225 (523) Q Consensus 146 VvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~l 225 (523) +++|.|.+.|+.+ +.+..|+.-++.+. T Consensus 79 ~ilv~d~~~~~s~-~~~~~~~~~~~~~~---------------------------------------------------- 105 (170) T d1i2ma_ 79 AIIMFDVTSRVTY-KNVPNWHRDLVRVC---------------------------------------------------- 105 (170) T ss_dssp EEEEEETTSGGGG-TTHHHHHHHHHHHH---------------------------------------------------- T ss_pred EEEEEECCCCCHH-HHHHHHHHHHHHCC---------------------------------------------------- T ss_conf 9999705774126-88888765443125---------------------------------------------------- Q ss_pred CCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHC Q ss_conf 88876230058832799850741255554205774789999999999999971876888326636789999999998760 Q Ver_Hs_NP_0572 226 PLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLY 305 (523) Q Consensus 226 PLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrLy 305 (523) ..+|+++|++|+|. .++...+|.-.+ |-.++...|-||++.+.|++-+..+|.-+|+ T Consensus 106 ----------~~~piiiVgnK~Dl-----~~~~~~~e~~~~--------~~~~~~~~~e~Sak~~~~i~e~f~~l~~~l~ 162 (170) T d1i2ma_ 106 ----------ENIPIVLCGNKVDI-----KDRKVKAKSIVF--------HRKKNLQYYDISAKSNYNFEKPFLWLARKLI 162 (170) T ss_dssp ----------CSCCEEEEEECCCC-----SCSCCTTTSHHH--------HSSCSSEEEEEBTTTTBTTTHHHHHHHHHHH T ss_pred ----------CCEEEEEEEEECCH-----HHHHHHHHHHHH--------HHHCCCCEEEEECCCCCCHHHHHHHHHHHHH T ss_conf ----------75278998751220-----232238999999--------9856991899972689898899999999984 Q ss_pred CCC Q ss_conf 655 Q Ver_Hs_NP_0572 306 GFP 308 (523) Q Consensus 306 gfp 308 (523) +-| T Consensus 163 ~~p 165 (170) T d1i2ma_ 163 GDP 165 (170) T ss_dssp TCT T ss_pred CCC T ss_conf 588 No 19 >d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus)} Probab=98.37 E-value=4.4e-06 Score=57.25 Aligned_columns=167 Identities=13% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 58897369976789999974201468886521456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) +|++||+.++|||||+.++.....+.-+..-.-.-. +.-++.+|-+.|...+..+.+.-+.--. .+|+ T Consensus 4 ki~~lG~~~vGKTsll~~~~~~~~~~~~~~~~~~~~--------~~~~l~i~D~~G~~~~~~~~~~~~~~~~----~~i~ 71 (195) T d1svsa1 4 KLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTF--------KDLHFKMFDVGGQRSERKKWIHCFEGVT----AIIF 71 (195) T ss_dssp EEEEECSTTSSHHHHHHHHHHHHSCCCSEEEEEEEE--------TTEEEEEEEECCSGGGGGGGGGGCTTCS----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEEE--------EEEEEEEEECCCCHHHHHHHHHHHCCCC----EEEE T ss_conf 899982499867787654315841242179999986--------4799999864775157777786506997----5899 Q ss_pred HHHHHHHHH------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 540101368------99999999999999997327898899999999999999850455566665534456766677653 Q Ver_Hs_NP_0572 149 VVDMSKPWT------ALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDS 222 (523) Q Consensus 149 vlDmS~PWt------~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~ 222 (523) |.|.+..=. |+..|+.|..+++..+..-. T Consensus 72 V~Disd~~s~~~~~~~~~~l~~~~~~~~~i~~~~~--------------------------------------------- 106 (195) T d1svsa1 72 CVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKW--------------------------------------------- 106 (195) T ss_dssp EEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTCGG--------------------------------------------- T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--------------------------------------------- T ss_conf 98658602346666445679999999999741457--------------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCH--------HHHHHHHHHHHHHHHHHCCE-------EEEECC Q ss_conf 447888762300588327998507412555542057747--------89999999999999971876-------888326 Q Ver_Hs_NP_0572 223 VVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRD--------EHFDFFQSHIRKFCLRYGAA-------LIYTSV 287 (523) Q Consensus 223 v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~d--------E~fDfIqq~LR~icL~YGAa-------LiYTS~ 287 (523) .-.+|++||++|+|..+.-.+.-.... ..++-...+++.-......+ .+|||+ T Consensus 107 ------------~~~~piilv~NK~Dl~~~k~~~~~~~~~~~~~~~~~~~e~~~~~i~~~f~~~~~~~~~k~~~~~~tSA 174 (195) T d1svsa1 107 ------------FTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCA 174 (195) T ss_dssp ------------GTTSEEEEEEECHHHHHHHTTTSCGGGTCTTCCSCSSHHHHHHHHHHHHHTTCSCTTTCCEEEEECCT T ss_pred ------------CCCCEEEEEECCCCHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC T ss_conf ------------78966999833862032245345312302234777678999999999999863277776156788640 Q ss_pred CCHHHHHHHHHHHHHHH Q ss_conf 63678999999999876 Q Ver_Hs_NP_0572 288 KENKNIDLVYKYIVQKL 304 (523) Q Consensus 288 ke~knl~LLykYl~HrL 304 (523) +...|++.+..++..-+ T Consensus 175 k~~~NI~~vF~~v~d~I 191 (195) T d1svsa1 175 TDTKNVQFVFDAVTDVI 191 (195) T ss_dssp TCHHHHHHHHHHHHHHH T ss_pred CCCHHHHHHHHHHHHHH T ss_conf 12578999999999997 No 20 >d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2} Probab=98.36 E-value=4.3e-07 Score=64.06 Aligned_columns=160 Identities=19% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 58897369976789999974201468886521456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) +|+|+|..++|||||+.+|.+.+-..-..-.++.+..+ .-+..++.+|-+.|...+..+.+..+..-. .+++ T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~~~~~~~~t~~~~~~~i----~~~~~~~~l~D~~G~~~~~~~~~~~~~~~d----~ii~ 75 (165) T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTL----EHRGFKLNIWDVGGQKSLRSYWRNYFESTD----GLIW 75 (165) T ss_dssp EEEEECSTTSSHHHHHHHHTTCCCSSCCCCSSEEEEEE----EETTEEEEEEEECCSHHHHTTGGGGCTTCS----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEEEEE----CCCEEEEEEECCCCCHHHHHHHHHHHCCCC----HHHH T ss_conf 89998179998999999983782046655787556530----583589998406751022335788732220----3223 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |+|.+.|+.+.+..+.|..++.+.... T Consensus 76 v~d~~~~~~~~~~~~~l~~~~~~~~~~----------------------------------------------------- 102 (165) T d1ksha_ 76 VVDSADRQRMQDCQRELQSLLVEERLA----------------------------------------------------- 102 (165) T ss_dssp EEETTCGGGHHHHHHHHHHHHTCGGGT----------------------------------------------------- T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHC----------------------------------------------------- T ss_conf 223105688889999999998555307----------------------------------------------------- Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHC Q ss_conf 76230058832799850741255554205774789999999999999971876888326636789999999998760 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLY 305 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrLy 305 (523) ++|++||++|+|. .-....-++.+.+--...-..+..++.||++...+++-+..+|.-++. T Consensus 103 --------~~piiiv~nK~Dl--------~~~~~~~~i~~~l~~~~i~~~~~~~~~~Sa~tg~Gi~e~~~~l~~~i~ 163 (165) T d1ksha_ 103 --------GATLLIFANKQDL--------PGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDIS 163 (165) T ss_dssp --------TCEEEEEEECTTS--------TTCCCHHHHHHHTTGGGCCSSCEEEEECCTTTCTTHHHHHHHHHHHHH T ss_pred --------CCEEEEEEECCCC--------CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHH T ss_conf --------9608999874688--------654788899999888851458817999862579888999999999973 No 21 >d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima} Probab=98.27 E-value=1.8e-06 Score=59.90 Aligned_columns=172 Identities=26% Q ss_pred CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCC Q ss_conf 45425787658897369976789999974201468886521456404500004325246368658624324555678700 Q Ver_Hs_NP_0572 60 SRSKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAV 139 (523) Q Consensus 60 ~~~klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~ 139 (523) |-.++...=+|.|+|..++|||||+.+|.+.+...-+.-.+.+--.......-+..++.+|-+.|-.....+-+...... T Consensus 1 s~p~~~~~ikI~iiG~~~~GKSTLin~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~Dt~G~~~~~~~~~~~~~~~ 80 (186) T d1mkya2 1 SKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRRKSRVEPRTVEKY 80 (186) T ss_dssp SCCCCCSCEEEEEECSTTSSHHHHHHHHHTSTTEEECCC------CCCEEEEETTEEEEESSCSCC-----------CCS T ss_pred CCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHH T ss_conf 98754367379998349998889999984442213105523455541010111112247841687410010112234345 Q ss_pred HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC Q ss_conf 266645--------565540101368999999999999999973278988999999999999998504555666655344 Q Ver_Hs_NP_0572 140 SLKDTL--------VMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRR 211 (523) Q Consensus 140 si~~TL--------VvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~ 211 (523) .+..++ +++++|-++++. ++...|+..++ T Consensus 81 ~~~~~~~~~~~~div~~vid~~~~~~--~~~~~~~~~~~----------------------------------------- 117 (186) T d1mkya2 81 SNYRVVDSIEKADVVVIVLDATQGIT--RQDQRMAGLME----------------------------------------- 117 (186) T ss_dssp CCHHHHHHHHHCSEEEEEEETTTCCC--HHHHHHHHHHH----------------------------------------- T ss_pred HHHHHHHHHHHHCCCCEEECCCCCCH--HHHHHHHHHHH----------------------------------------- T ss_conf 55555566543024202321667720--45799999877----------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC-CEEEEECCCCH Q ss_conf 56766677653447888762300588327998507412555542057747899999999999999718-76888326636 Q Ver_Hs_NP_0572 212 NTASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYG-AALIYTSVKEN 290 (523) Q Consensus 212 ~~~~~~~~d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YG-AaLiYTS~ke~ 290 (523) ..+.|++||++|+|.+ ..+++.++-+...++...-+.+ ..+|++|.+.. T Consensus 118 -----------------------~~~~p~iiv~NK~Dli-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~SA~tg 167 (186) T d1mkya2 118 -----------------------RRGRASVVVFNKWDLV-------VHREKRYDEFTKLFREKLYFIDYSPLIFTSADKG 167 (186) T ss_dssp -----------------------HTTCEEEEEEECGGGS-------TTGGGCHHHHHHHHHHHCGGGTTSCEEECBTTTT T ss_pred -----------------------HHHHHHHHHCCCCCCC-------CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC T ss_conf -----------------------5000122212310133-------4303479999999998852148986799734679 Q ss_pred HHHHHHHHHHHHHH Q ss_conf 78999999999876 Q Ver_Hs_NP_0572 291 KNIDLVYKYIVQKL 304 (523) Q Consensus 291 knl~LLykYl~HrL 304 (523) .|++-|..+|-+-+ T Consensus 168 ~gi~~l~~~i~~~~ 181 (186) T d1mkya2 168 WNIDRMIDAMNLAY 181 (186) T ss_dssp BSHHHHHHHHHHHH T ss_pred CCHHHHHHHHHHHH T ss_conf 88889999999998 No 22 >d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus} Probab=98.27 E-value=4.9e-07 Score=63.71 Aligned_columns=172 Identities=20% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHH Q ss_conf 25787658897369976789999974201468886521456404500004325246368658624324555678700266 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLK 142 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~ 142 (523) |..|++ |.|+|..++|||||+.+|.+.+...-+.-.+-+--...........+..+|=.-|=..........+..+.+. T Consensus 2 ~~~~~~-I~ivG~~n~GKSTLin~l~~~~~~~~~~~~~tT~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~ 80 (178) T d1wf3a1 2 KTYSGF-VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFMDQEVYE 80 (178) T ss_dssp CCEEEE-EEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEEEEEETTEEEEEEECCCCCCCCSHHHHHHHHHHHH T ss_pred CEECCE-EEEEECCCCCHHHHHHHHHCCCCCEECCCCCEEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCC T ss_conf 200436-8998349987899999984551100015551467654320003762158854631100012344543200001 Q ss_pred HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC Q ss_conf 64----55655401013689999999999999999732789889999999999999985045556666553445676667 Q Ver_Hs_NP_0572 143 DT----LVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQED 218 (523) Q Consensus 143 ~T----LVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~ 218 (523) .. +|++++|.+.+ +.++...|..++++.. T Consensus 81 ~i~~~d~ii~viD~~~~--~~~~~~~~~~~l~~~~--------------------------------------------- 113 (178) T d1wf3a1 81 ALADVNAVVWVVDLRHP--PTPEDELVARALKPLV--------------------------------------------- 113 (178) T ss_dssp HTSSCSEEEEEEETTSC--CCHHHHHHHHHHGGGT--------------------------------------------- T ss_pred HHHHCCEEEEECCCCCC--CCHHHHHHHHHHHHHH--------------------------------------------- T ss_conf 01012213552145566--4456788999999862--------------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHH Q ss_conf 76534478887623005883279985074125555420577478999999999999997187688832663678999999 Q Ver_Hs_NP_0572 219 KDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYK 298 (523) Q Consensus 219 ~d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLyk 298 (523) ...|++||.+|+|.. +..++..+.+++.+ --+..+++|++...+++-|.. T Consensus 114 -----------------~~~piiiv~NK~Dl~-------~~~~~~~~~~~~~~------~~~~~~~vSa~~~~gi~~L~~ 163 (178) T d1wf3a1 114 -----------------GKVPILLVGNKLDAA-------KYPEEAMKAYHELL------PEAEPRMLSALDERQVAELKA 163 (178) T ss_dssp -----------------TTSCEEEEEECGGGC-------SSHHHHHHHHHHTS------TTSEEEECCTTCHHHHHHHHH T ss_pred -----------------CCCCCEEECCCCCCC-------CCHHHHHHHHHHHC------CCCCEEEEECCCCCCHHHHHH T ss_conf -----------------036421100566765-------68578999999842------899779985147878889999 Q ss_pred HHHHHHCCCCCCCC Q ss_conf 99987606555655 Q Ver_Hs_NP_0572 299 YIVQKLYGFPYKIP 312 (523) Q Consensus 299 Yl~HrLygfpf~~~ 312 (523) +|...|---|+-.| T Consensus 164 ~i~~~lpe~p~~~p 177 (178) T d1wf3a1 164 DLLALMPEGPFFYP 177 (178) T ss_dssp HHHTTCCBCCCSSC T ss_pred HHHHHCCCCCCCCC T ss_conf 99996778889889 No 23 >d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6} Probab=98.27 E-value=9.7e-07 Score=61.68 Aligned_columns=155 Identities=17% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 58897369976789999974201468886521456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) .|+|+|..++|||||+.++...+......-.++.+..+...+ .++.+|.+.|...+..+.+..+..-. .+++ T Consensus 14 ki~iiG~~~vGKSsll~~~~~~~~~~~~~t~~~~~~~i~~~~----~~~~l~D~~g~~~~~~~~~~~~~~~d----~ii~ 85 (173) T d1e0sa_ 14 RILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKN----VKFNVWDVGGQDKIRPLWRHYYTGTQ----GLIF 85 (173) T ss_dssp EEEEEEETTSSHHHHHHHTTCCCCEEEEEETTEEEEEEEETT----EEEEEEEESCCGGGHHHHGGGTTTCC----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCEECCEEEEEEEEEEEE----EEEEEEECCCCHHHHHHHHHHCCCCC----EEEE T ss_conf 899981799879999999853854302202048999840036----99998644741156889998505886----8999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |.|.+.|..+-+-.+.|.++++..... T Consensus 86 v~d~~~~~s~~~~~~~l~~i~~~~~~~----------------------------------------------------- 112 (173) T d1e0sa_ 86 VVDCADRDRIDEARQELHRIINDREMR----------------------------------------------------- 112 (173) T ss_dssp EEETTCGGGHHHHHHHHHHHHTSGGGT----------------------------------------------------- T ss_pred EEECCCCCCHHHHHHHHHHHHHHHCCC----------------------------------------------------- T ss_conf 997388313789999999998641379----------------------------------------------------- Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH----CCEEEEECCCCHHHHHHHHHHHHHHH Q ss_conf 76230058832799850741255554205774789999999999999971----87688832663678999999999876 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRY----GAALIYTSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~Y----GAaLiYTS~ke~knl~LLykYl~HrL 304 (523) .+|++||++|+|... .-..++ ..+.+.+.. ...++.||++..++++-+..+|..++ T Consensus 113 --------~~piiiv~NK~Dl~~------~~~~~e------~~~~l~l~~~~~~~~~~~~~SA~tgeGi~e~~~~l~~~~ 172 (173) T d1e0sa_ 113 --------DAIILIFANKQDLPD------AMKPHE------IQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNY 172 (173) T ss_dssp --------TCEEEEEEECTTSTT------CCCHHH------HHHHTTGGGCCSSCEEEEECBTTTTBTHHHHHHHHHHHC T ss_pred --------CCEEEEEEECCCCCC------CCCHHH------HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHC T ss_conf --------854899864058765------679999------999988875145873799975256998899999999845 No 24 >d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae)} Probab=98.23 E-value=4.4e-06 Score=57.19 Aligned_columns=162 Identities=22% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCC-CEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 588973699767899999742014688865-2145640450000432524636865862432455567870026664556 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRG-LEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVM 147 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~g-LeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVv 147 (523) +|+++|..++|||||+.+|.+..-...... ....+....-......-++.+|...|......+.+.....-. .++ T Consensus 5 ki~ivG~~~vGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~----~~i 80 (170) T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQ----AAL 80 (170) T ss_dssp EEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGHHHHHTTCS----EEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCC----EEE T ss_conf 8999807998899999998668101241343313665676665470279986237651455555577774120----457 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 55401013689999999999999999732789889999999999999985045556666553445676667765344788 Q Ver_Hs_NP_0572 148 LVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPL 227 (523) Q Consensus 148 IvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPL 227 (523) ++.|.+.+ .-.++++.|+..+........ T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------- 109 (170) T d1ek0a_ 81 VVYDVTKP-QSFIKARHWVKELHEQASKDI-------------------------------------------------- 109 (170) T ss_dssp EEEETTCH-HHHHHHHHHHHHHHHHSCTTC-------------------------------------------------- T ss_pred EEEEECCC-CCHHHHHHHHHHHHHHHHCCC-------------------------------------------------- T ss_conf 77641122-336789999888753210243-------------------------------------------------- Q ss_pred CCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH Q ss_conf 87623005883279985074125555420577478999999999999997187688832663678999999999876 Q Ver_Hs_NP_0572 228 GADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 228 geg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrL 304 (523) |+++|++|+|....-....-..++ .+.+|-..++..+.+|++...|++-+...|..+| T Consensus 110 -----------~~iiv~nK~Dl~~~~~~~~i~~~~--------~~~~~~~~~~~~~~~Sa~~g~gI~elf~~i~~~i 167 (170) T d1ek0a_ 110 -----------IIALVGNKIDMLQEGGERKVAREE--------GEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 167 (170) T ss_dssp -----------EEEEEEECGGGGGSSCCCCSCHHH--------HHHHHHHHTCEEEECCTTTCTTHHHHHHHHHTTS T ss_pred -----------CCEEEECCHHHHHHCCCCCHHHHH--------HHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHC T ss_conf -----------110100000012210112200899--------9999996498499986268878889999999856 No 25 >d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus} Probab=98.15 E-value=2.8e-06 Score=58.52 Aligned_columns=166 Identities=22% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCH---HHHHH Q ss_conf 588973699767899999742014688865214564045000043252463686586243245556787002---66645 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVS---LKDTL 145 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~s---i~~TL 145 (523) ||-|+|..++|||||+.+|.+....-....-.=.-..++.-...+..++.+|-..|-....+.-......-. -..-+ T Consensus 3 ~I~iiG~~~~GKSSLi~~L~~~~~~~~~~~~~t~~~~~~~~~~~~~~~i~l~D~pG~~~~~~~~~~~~~~~~~~~~~~d~ 82 (180) T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRV 82 (180) T ss_dssp SEEEECCGGGCHHHHHHHHCSSCCEECCCTTCSSCCEEEEEECSSSCEEEEEECCCCCCCGGGSCCSCHHHHHHHTSSSE T ss_pred CEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 14887459986899999985684013203676125788899742884036732675445653100112222101233345 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 56554010136899999999999999997327898899999999999999850455566665534456766677653447 Q Ver_Hs_NP_0572 146 VMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVV 225 (523) Q Consensus 146 VvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~l 225 (523) +++++|-+. ..+++++.|...+...-..+. T Consensus 83 i~~v~d~~~--~~~~~~~~~~~~l~~~~~~~~------------------------------------------------ 112 (180) T d1udxa2 83 LLYVLDAAD--EPLKTLETLRKEVGAYDPALL------------------------------------------------ 112 (180) T ss_dssp EEEEEETTS--CHHHHHHHHHHHHHHHCHHHH------------------------------------------------ T ss_pred HHHHHCCCC--CHHHHHHHHHHHHHHHHHHHH------------------------------------------------ T ss_conf 443200134--304789999999875445532------------------------------------------------ Q ss_pred CCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHC Q ss_conf 88876230058832799850741255554205774789999999999999971876888326636789999999998760 Q Ver_Hs_NP_0572 226 PLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLY 305 (523) Q Consensus 226 PLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrLy 305 (523) .+|+++|++|+|.++ +--...++..+-+-+...+++|.+...+++.|..+|.+.+- T Consensus 113 -----------~~p~iiv~NK~Dl~~-------------~~~~~~~~~~~~~~~~~v~~iSa~tg~Gi~eL~e~l~~~i~ 168 (180) T d1udxa2 113 -----------RRPSLVALNKVDLLE-------------EEAVKALADALAREGLAVLPVSALTGAGLPALKEALHALVR 168 (180) T ss_dssp -----------HSCEEEEEECCTTSC-------------HHHHHHHHHHHHTTTSCEEECCTTTCTTHHHHHHHHHHHHH T ss_pred -----------HHCCHHHHCCCCCCC-------------HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH T ss_conf -----------100001202456667-------------44589999999735897899834668887899999999986 Q ss_pred CCC Q ss_conf 655 Q Ver_Hs_NP_0572 306 GFP 308 (523) Q Consensus 306 gfp 308 (523) ..| T Consensus 169 ~~~ 171 (180) T d1udxa2 169 STP 171 (180) T ss_dssp TSC T ss_pred HCC T ss_conf 268 No 26 >d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1} Probab=98.15 E-value=9.8e-07 Score=61.65 Aligned_columns=159 Identities=18% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 58897369976789999974201468886521456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) +|+|+|..++|||||+.+|..-+-.....-+++.+..+...+. ++.+|-..|...+..+.+..+.... .+++ T Consensus 2 ki~iiG~~~~GKSsLi~~l~~~~~~~~~~t~~~~~~~i~~~~~----~~~~~D~~g~~~~~~~~~~~~~~~~----~ii~ 73 (160) T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI----SFTVWDVGGQDKIRPLWRHYFQNTQ----GLIF 73 (160) T ss_dssp EEEEECSTTSSHHHHHHHHHHHCSSCCCCCSSCCEEEEECSSC----EEEEEECCCCGGGHHHHHHHTTTCS----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEEE----EEEEECCCCCCCHHHHHHHHHCCCC----EEEE T ss_conf 7899807999899999998468202222001589999973478----9987036644201122354403781----8999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |.|.+.+..+.+..+.|..+++..-.. T Consensus 74 v~d~~~~~s~~~~~~~~~~~~~~~~~~----------------------------------------------------- 100 (160) T d1r8sa_ 74 VVDSNDRERVNEAREELMRMLAEDELR----------------------------------------------------- 100 (160) T ss_dssp EEETTCGGGHHHHHHHHHHHHTCGGGT----------------------------------------------------- T ss_pred EEECCCCHHHHHHHHHHHHHHHHHCCC----------------------------------------------------- T ss_conf 971456202688999999998523027----------------------------------------------------- Q ss_pred CCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH Q ss_conf 7623005883279985074125555420577478999999999999997187688832663678999999999876 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrL 304 (523) ++|++||.+|+|. .-..+.-++.+..-....-.-...++.||++...+++=....|.+.| T Consensus 101 --------~~piiiv~NK~Dl--------~~~~~~~e~~~~l~~~~~~~~~~~~~~~SA~~g~Gi~e~~~~l~~~~ 160 (160) T d1r8sa_ 101 --------DAVLLVFANKQDL--------PNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160 (160) T ss_dssp --------TCEEEEEEECTTS--------TTCCCHHHHHHHTTGGGCSSCCEEEEECBTTTTBTHHHHHHHHHHHC T ss_pred --------CCEEEEEEECCCC--------CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHC T ss_conf --------8616899863588--------53246788999988874144881799986357998899999999719 No 27 >d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus)} Probab=98.12 E-value=9e-06 Score=55.11 Aligned_columns=164 Identities=23% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCC-CEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 588973699767899999742014688865-2145640450000432524636865862432455567870026664556 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRG-LEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVM 147 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~g-LeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVv 147 (523) +|+|+|..++|||||+.+|.+.+-...... .+..+....=...........|...+........+....... .++ T Consensus 4 ki~ivG~~nvGKSsLl~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~~i 79 (184) T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGAD----CCV 79 (184) T ss_dssp EEEEECCTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEESSSCEEEEEEEEECSSGGGSCSCCGGGTTCS----EEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHH----HHH T ss_conf 8999807998799999998668013453565125889999986353212565057520245567888866544----433 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 55401013689999999999999999732789889999999999999985045556666553445676667765344788 Q Ver_Hs_NP_0572 148 LVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPL 227 (523) Q Consensus 148 IvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPL 227 (523) ++.|...+ .....+..|..-+..+..... T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------- 108 (184) T d1vg8a_ 80 LVFDVTAP-NTFKTLDSWRDEFLIQASPRD-------------------------------------------------- 108 (184) T ss_dssp EEEETTCH-HHHHTHHHHHHHHHHHHCCSS-------------------------------------------------- T ss_pred HHHHHCCC-CCHHHHHHHHHHHHHHHHCCC-------------------------------------------------- T ss_conf 21110254-305678888899998730134-------------------------------------------------- Q ss_pred CCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHC Q ss_conf 876230058832799850741255554205774789999999999999971876888326636789999999998760 Q Ver_Hs_NP_0572 228 GADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLY 305 (523) Q Consensus 228 geg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrLy 305 (523) ...+|+++|.+|+|. +++....+...+.+.-..+...+.+|++...|++-+..-|.-.++ T Consensus 109 -------~~~~piiiv~nK~Dl-----------~~~~~~~~~~~~~~~~~~~~~~~~~Sak~g~gi~e~f~~i~~~~l 168 (184) T d1vg8a_ 109 -------PENFPFVVLGNKIDL-----------ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 168 (184) T ss_dssp -------GGGSCEEEEEECTTS-----------SCCCSCHHHHHHHHHHTTSCCEEECBTTTTBSHHHHHHHHHHHHH T ss_pred -------CCCCCEEEECCCCCC-----------CHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH T ss_conf -------477537898256452-----------000011489999999844982899852789888899999999997 No 28 >d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)} Probab=98.11 E-value=2.1e-06 Score=59.38 Aligned_columns=158 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 88973699767899999742014688865214564045000043252463686586243245556787002666455655 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvIv 149 (523) |+++|..++|||||+.++.+.+-........-......-.......+..+|...|...+....+.....-.. ++++ T Consensus 6 i~lvG~~nvGKSsLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~~~----~~~~ 81 (166) T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEG----FLCV 81 (166) T ss_dssp EEEEESTTSSHHHHHHHHHHCCCCCSCCCCSEEEEEEEEEETTEEEEEEEEEECCCGGGHHHHHHHHHHCSE----EEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHH----HHHH T ss_conf 999817998799999998648113342455533679999981037788875135620001222101000133----2222 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 40101368999999999999999973278988999999999999998504555666655344567666776534478887 Q Ver_Hs_NP_0572 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLGA 229 (523) Q Consensus 150 lDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLge 229 (523) .|.+.+..+-.....|....+... T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------------- 105 (166) T d1ctqa_ 82 FAINNTKSFEDIHQYREQIKRVKD-------------------------------------------------------- 105 (166) T ss_dssp EETTCHHHHHTHHHHHHHHHHHHT-------------------------------------------------------- T ss_pred HHHCCCHHHHHHHHHHHHHHHCCC-------------------------------------------------------- T ss_conf 211010000001356655542013-------------------------------------------------------- Q ss_pred CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH Q ss_conf 623005883279985074125555420577478999999999999997187688832663678999999999876 Q Ver_Hs_NP_0572 230 DTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 230 g~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrL 304 (523) ...+|+++|++|+|. ++..+..+.++.|+-++|+..+.+|++...|++-+..+|.+.+ T Consensus 106 -----~~~~~iiiv~nK~Dl------------~~~~~~~~~~~~~~~~~~~~~~e~Sak~g~gi~e~f~~l~~~i 163 (166) T d1ctqa_ 106 -----SDDVPMVLVGNKCDL------------AARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 163 (166) T ss_dssp -----CSSCCEEEEEECTTC------------SCCCSCHHHHHHHHHHHTCCEEECCTTTCTTHHHHHHHHHHHH T ss_pred -----CCCCEEEEEECCCCH------------HHCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH T ss_conf -----478269997022463------------3505678999999996399189986268988889999999998 No 29 >d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3} Probab=98.04 E-value=4.3e-07 Score=64.08 Aligned_columns=175 Identities=18% Q ss_pred HHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCC Q ss_conf 99886414454257876588973699767899999742014688865214564045000043252463686586243245 Q Ver_Hs_NP_0572 52 ILSEVSTRSRSKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGL 131 (523) Q Consensus 52 iL~~v~t~~~~klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~L 131 (523) ||+-+..-+.+.-.+ -.|+|+|..++|||||+.+|.+.+-.....-+++.+..+..+. .++.+|...|...+..+ T Consensus 2 ~~~~~~~~~~~~~~~-~ki~ivG~~~~GKTsli~~l~~~~~~~~~~t~~~~~~~i~~~~----~~~~i~d~~G~~~~~~~ 76 (176) T d1fzqa_ 2 LLSILRKLKSAPDQE-VRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQG----FKLNVWDIGGQRKIRPY 76 (176) T ss_dssp CCCHHHHCSSCCSSC-EEEEEEESTTSSHHHHHHHHCCSCCEEEEEETTEEEEEEEETT----EEEEEEECSSCGGGHHH T ss_pred HHHHHHHHCCCCCCE-EEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEEECEE----EEEEECCCCCHHHHHHH T ss_conf 346778724899864-7999980799978999999845764310234788875431104----52100357401356788 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC Q ss_conf 55678700266645565540101368999999999999999973278988999999999999998504555666655344 Q Ver_Hs_NP_0572 132 LKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRR 211 (523) Q Consensus 132 LK~aLt~~si~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~ 211 (523) .+..+..-. .+++|.|.+.++.|-+....|.+++...... T Consensus 77 ~~~~~~~~~----~~ilv~d~~~~~s~~~~~~~~~~~l~~~~~~------------------------------------ 116 (176) T d1fzqa_ 77 WRSYFENTD----ILIYVIDSADRKRFEETGQELTELLEEEKLS------------------------------------ 116 (176) T ss_dssp HHHHHTTCS----EEEEEEETTCGGGHHHHHHHHHHHTTCGGGT------------------------------------ T ss_pred HHHHHCCCC----EEEEEEECCCCCCHHHHHHHHHHHHHCCCCC------------------------------------ T ss_conf 888521686----4899982567566788999999997323557------------------------------------ Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHH Q ss_conf 56766677653447888762300588327998507412555542057747899999999999999718768883266367 Q Ver_Hs_NP_0572 212 NTASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENK 291 (523) Q Consensus 212 ~~~~~~~~d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~k 291 (523) ++|++||++|+|. ....+.-.+.+..-...+-..+..++.||.+... T Consensus 117 -------------------------~~piiiv~nK~Dl--------~~~~~~~ei~~~l~~~~~~~~~~~i~~~Sa~tg~ 163 (176) T d1fzqa_ 117 -------------------------CVPVLIFANKQDL--------LTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGE 163 (176) T ss_dssp -------------------------TCCEEEEEECTTS--------TTCCCHHHHHHHTTGGGCCSSCEEEEECCTTTCT T ss_pred -------------------------CEEEEEEEECCCC--------CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCC T ss_conf -------------------------5058999822588--------6547888999996366541178269998535698 Q ss_pred HHHHHHHHHHHHH Q ss_conf 8999999999876 Q Ver_Hs_NP_0572 292 NIDLVYKYIVQKL 304 (523) Q Consensus 292 nl~LLykYl~HrL 304 (523) +++=+..+|.-++ T Consensus 164 gi~e~~~~i~~~i 176 (176) T d1fzqa_ 164 GVQDGMNWVCKNV 176 (176) T ss_dssp THHHHHHHHHHTC T ss_pred CHHHHHHHHHHHC T ss_conf 8899999999609 No 30 >d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis} Probab=97.98 E-value=5.1e-06 Score=56.77 Aligned_columns=157 Identities=19% Q ss_pred EEEEEECCCCCHHHHHHHHHH------CCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHH Q ss_conf 588973699767899999742------01468886521456404500004325246368658624324555678700266 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQG------IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLK 142 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~------~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~ 142 (523) ||.|+|..++|||||+.+|.+ .+..+..+-.+.+.--..-.-.....++.+|=.-|-..+.......+..-. T Consensus 7 ~I~iiG~~naGKSTLin~L~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~i~iiDtpG~~~~~~~~~~~~~~~D-- 84 (179) T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRITLVDAPGHADLIRAVVSAADIID-- 84 (179) T ss_dssp EEEEEECTTSSHHHHHHHHHTTC--------------------CCCEEEETTEEEEECCCSSHHHHHHHHHHHTTSCC-- T ss_pred EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHCCE-- T ss_conf 689984189888899999976310101255312000024664112331111212899717663024566666643150-- Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 64556554010136899999999999999997327898899999999999999850455566665534456766677653 Q Ver_Hs_NP_0572 143 DTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDS 222 (523) Q Consensus 143 ~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~ 222 (523) ++++|+|.+++ ...+-.+-+..+.. T Consensus 85 --~vi~vid~~~~--~~~~~~e~~~~~~~--------------------------------------------------- 109 (179) T d1wb1a4 85 --LALIVVDAKEG--PKTQTGEHMLILDH--------------------------------------------------- 109 (179) T ss_dssp --EEEEEEETTTC--SCHHHHHHHHHHHH--------------------------------------------------- T ss_pred --EEEEEEECCCC--CCCCHHHHHHHHHH--------------------------------------------------- T ss_conf --57887405455--34103899999985--------------------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH----CCEEEEECCCCHHHHHHHHH Q ss_conf 44788876230058832799850741255554205774789999999999999971----87688832663678999999 Q Ver_Hs_NP_0572 223 VVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRY----GAALIYTSVKENKNIDLVYK 298 (523) Q Consensus 223 v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~Y----GAaLiYTS~ke~knl~LLyk 298 (523) +++|+++|++|+|... .++..+..+.++.+.-.. +...|.+|++...|++-|+. T Consensus 110 -------------~~~p~iiviNK~Dl~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SA~~g~gi~eL~~ 167 (179) T d1wb1a4 110 -------------FNIPIIVVITKSDNAG---------TEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKN 167 (179) T ss_dssp -------------TTCCBCEEEECTTSSC---------HHHHHHHHHHHHHHHHHSSSGGGCCEEECCTTTCTTHHHHHH T ss_pred -------------CCCCEEEEECCCCCCC---------CCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHH T ss_conf -------------0571488721512468---------778899999999988653178984378840567999899999 Q ss_pred HHHHHH Q ss_conf 999876 Q Ver_Hs_NP_0572 299 YIVQKL 304 (523) Q Consensus 299 Yl~HrL 304 (523) .|+++| T Consensus 168 ~i~~~l 173 (179) T d1wb1a4 168 LIITTL 173 (179) T ss_dssp HHHHHH T ss_pred HHHHHC T ss_conf 999755 No 31 >d1azsc2 c.37.1.8 (C:36-66,C:202-393) Transducin (alpha subunit) {Cow (Bos taurus)} Probab=97.94 E-value=0.0001 Score=47.98 Aligned_columns=164 Identities=22% Q ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 88973699767899999742014688865214564045000043252463686586243245556787002666455655 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvIv 149 (523) |+++|..++|||||+.+|.+.+.+....+.....+.+.+ ..+.+|-+.|......+...-...-. .++++ T Consensus 8 I~llG~~nvGKSSlln~l~~~~~~~~T~g~~~~~i~~~~------~~~~i~D~~G~~~~~~~~~~~~~~~~----~ii~v 77 (223) T d1azsc2 8 LLLLGAGESGKSTIVKQMRILHVNVLTSGIFETKFQVDK------VNFHMFDVGGQRDERRKWIQCFNDVT----AIIFV 77 (223) T ss_dssp EEEEESTTSSHHHHHHHHHHHHCCCCCCSEEEEEEEETT------EEEEEEEECCSGGGGGGGGGGTTTCC----EEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEECCEEEEEEEECC------EEEEEEEECCCHHHHHHHHHHHHHHH----HHHHH T ss_conf 899845998799999988357612100140799999736------89999872240133345565421003----43345 Q ss_pred HHHH----------HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC Q ss_conf 4010----------136899999999999999997327898899999999999999850455566665534456766677 Q Ver_Hs_NP_0572 150 VDMS----------KPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDK 219 (523) Q Consensus 150 lDmS----------~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~ 219 (523) .|.+ .-+.+.++++.|-.++.++... T Consensus 78 ~~~s~~~~~l~~d~~~~~~~es~~l~~~i~~~~~~~-------------------------------------------- 113 (223) T d1azsc2 78 VASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLR-------------------------------------------- 113 (223) T ss_dssp EETTGGGCBCTTTSCSBHHHHHHHHHHHHHTCTTCS-------------------------------------------- T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC-------------------------------------------- T ss_conf 466556766544214665489999999985260006-------------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCCHHH-----HHHHCCCCCHHH------------------HHHHHHHHHHHHH Q ss_conf 65344788876230058832799850741255-----554205774789------------------9999999999999 Q Ver_Hs_NP_0572 220 DDSVVVPLGADTLTHNLGIPVLVVCTKCDAIS-----VLEKEHDYRDEH------------------FDFFQSHIRKFCL 276 (523) Q Consensus 220 d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie-----~LEKe~~y~dE~------------------fDfIqq~LR~icL 276 (523) +.|+++|++|+|.++ ...+-..|-.|+ ++....|++.-++ T Consensus 114 -----------------~~piIlvlNK~DL~~~Ki~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~f~ 176 (223) T d1azsc2 114 -----------------TISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFL 176 (223) T ss_dssp -----------------SCCEEEEEECHHHHHHHHHHCSSCGGGTCGGGGTCCCCSSCCCCTTCCHHHHHHHHHHHHHHH T ss_pred -----------------CCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHH T ss_conf -----------------884899983410687665136654567404324666750000014788679999999999999 Q ss_pred HH-------CCEEE--EECCCCHHHHHHHHHHHHHHH Q ss_conf 71-------87688--832663678999999999876 Q Ver_Hs_NP_0572 277 RY-------GAALI--YTSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 277 ~Y-------GAaLi--YTS~ke~knl~LLykYl~HrL 304 (523) +. ...+. ||++....|++..-.++.-.+ T Consensus 177 ~~~~~~~~~~~~~y~h~t~a~dt~ni~~vf~~v~d~i 213 (223) T d1azsc2 177 RISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDII 213 (223) T ss_dssp HHHHTSCTTSSCEEEEECCTTCHHHHHHHHHHHHHHH T ss_pred HHHCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHH T ss_conf 9851688986306775310001089999999999999 No 32 >d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima} Probab=97.94 E-value=6.7e-06 Score=55.96 Aligned_columns=157 Identities=22% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEE-CCCCCCCCCCCCCCCCCHHHH---- Q ss_conf 588973699767899999742014688865214564045000043252463686-586243245556787002666---- Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWIL-DGDLYHKGLLKFSLDAVSLKD---- 143 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiL-dg~~~~~~LLK~aLt~~si~~---- 143 (523) .|.|+|..++|||||+.+|.+.+...-+..-+.+---....-.....++.+|-. .........+...+....... T Consensus 2 ~I~iiG~~~~GKSSLin~l~~~~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~Dt~g~~~~~~~~~~~~~~~~~~~~~~~a 81 (171) T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNPQDIISQKMKEVTLNMIREA 81 (171) T ss_dssp EEEEECCTTSSHHHHHHHHHC--------------CCSEEEEEETTEEEEEEECTTTTSSGGGCCCHHHHHHHHHHHTTC T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHC T ss_conf 58898259997899999984665303204563578876410112333034321244010000013456665544432102 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 45565540101368999999999999999973278988999999999999998504555666655344567666776534 Q Ver_Hs_NP_0572 144 TLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSV 223 (523) Q Consensus 144 TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v 223 (523) -++++++|-+++|. .+-..|+..++ T Consensus 82 d~ii~vid~~~~~~--~~~~~~~~~l~----------------------------------------------------- 106 (171) T d1mkya1 82 DLVLFVVDGKRGIT--KEDESLADFLR----------------------------------------------------- 106 (171) T ss_dssp SEEEEEEETTTCCC--HHHHHHHHHHH----------------------------------------------------- T ss_pred CCCEEEECCCCCCC--HHHHHHHHHHH----------------------------------------------------- T ss_conf 23035422556642--57889987643----------------------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHH Q ss_conf 47888762300588327998507412555542057747899999999999999718768883266367899999999987 Q Ver_Hs_NP_0572 224 VVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQK 303 (523) Q Consensus 224 ~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~Hr 303 (523) +.+.|+++|++|+|.+...++ +.+..+.-..-...|++|+++..|++-|.+.|.-+ T Consensus 107 -----------~~~~~ii~v~NK~D~~~~~~~-------------~~~~~~~~~~~~~~~~vSA~~g~gi~~L~~~i~~~ 162 (171) T d1mkya1 107 -----------KSTVDTILVANKAENLREFER-------------EVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKK 162 (171) T ss_dssp -----------HHTCCEEEEEESCCSHHHHHH-------------HTHHHHGGGSSCSCEECBTTTTBSHHHHHHHHHHH T ss_pred -----------CCCCCEEEEEECCCCCCHHHH-------------HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH T ss_conf -----------179977999872444322478-------------99999995689977998514688889999999986 Q ss_pred H Q ss_conf 6 Q Ver_Hs_NP_0572 304 L 304 (523) Q Consensus 304 L 304 (523) + T Consensus 163 l 163 (171) T d1mkya1 163 L 163 (171) T ss_dssp H T ss_pred H T ss_conf 0 No 33 >d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)} Probab=97.87 E-value=1.2e-05 Score=54.20 Aligned_columns=157 Identities=22% Q ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 88973699767899999742014688865214564045000043252463686586243245556787002666455655 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvIv 149 (523) |+++|..++|||||+.+|.+.+-..-....++.+..+...+ -.+.+|...|...+..+.+....-.. .|++| T Consensus 16 I~lvG~~~~GKTsll~~l~~~~~~~~~~t~~~~~~~i~~~~----~~~~i~d~~g~~~~~~~~~~~~~~~~----~ii~v 87 (186) T d1f6ba_ 16 LVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAG----MTFTTFDLGGHIQARRVWKNYLPAIN----GIVFL 87 (186) T ss_dssp EEEEEETTSSHHHHHHHHSCC------CCCCCSCEEEEETT----EEEEEEEECC----CCGGGGGGGGCS----EEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEE----EEEEEEECCCHHHHHHHHHHHHCCCC----EEEEE T ss_conf 99981699979999999846815430226888789985114----78998405521344677787740555----58888 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 40101368999999999999999973278988999999999999998504555666655344567666776534478887 Q Ver_Hs_NP_0572 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLGA 229 (523) Q Consensus 150 lDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLge 229 (523) .|.+++..+.+....|..++.+.-.. T Consensus 88 ~D~~d~~~~~~~~~~l~~~~~~~~~~------------------------------------------------------ 113 (186) T d1f6ba_ 88 VDCADHERLLESKEELDSLMTDETIA------------------------------------------------------ 113 (186) T ss_dssp EETTCGGGHHHHHHHHHHHHTCGGGT------------------------------------------------------ T ss_pred EECCCCCCHHHHHHHHHHHHHHHHCC------------------------------------------------------ T ss_conf 52457566678999999987401017------------------------------------------------------ Q ss_pred CCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC-------------EEEEECCCCHHHHHHH Q ss_conf 623005883279985074125555420577478999999999999997187-------------6888326636789999 Q Ver_Hs_NP_0572 230 DTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGA-------------ALIYTSVKENKNIDLV 296 (523) Q Consensus 230 g~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGA-------------aLiYTS~ke~knl~LL 296 (523) .+|++||++|.|... ....|+ |.+.+..+....+. .+|-||++....++=. T Consensus 114 -------~~piiiv~NK~Dl~~------~~~~~e---i~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~SA~tg~Gi~E~ 177 (186) T d1f6ba_ 114 -------NVPILILGNKIDRPE------AISEER---LREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEG 177 (186) T ss_dssp -------TSCEEEEEECTTSTT------CCCHHH---HHHHHTCTTTCCCSSCCCTTTCCSCCEEEEECBTTTTBSHHHH T ss_pred -------CCEEEEEECCCCCCC------CCCHHH---HHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHH T ss_conf -------960899852657520------589899---9998400144301333335663369637999851348888999 Q ss_pred HHHHHHHH Q ss_conf 99999876 Q Ver_Hs_NP_0572 297 YKYIVQKL 304 (523) Q Consensus 297 ykYl~HrL 304 (523) ..+|..-+ T Consensus 178 ~~~l~~~~ 185 (186) T d1f6ba_ 178 FRWMAQYI 185 (186) T ss_dssp HHHHHTTC T ss_pred HHHHHHHC T ss_conf 99999970 No 34 >d1m2ob_ c.37.1.8 (B:) SAR1 {Baker's yeast (Saccharomyces cerevisiae)} Probab=97.84 E-value=3.9e-05 Score=50.81 Aligned_columns=133 Identities=23% Q ss_pred EEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH Q ss_conf 88973699767899999742014688865214564045000043252463686586243245556787002666455655 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLV 149 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvIv 149 (523) |+++|..++|||||+.+|.+.+-.....-.+..+..+...+. .+.+|...|...+....+..+..-. .+++| T Consensus 3 I~iiG~~n~GKTtLi~~l~~~~~~~~~~t~~~~~~~~~~~~~----~~~i~d~~~~~~~~~~~~~~~~~~~----~ii~v 74 (167) T d1m2ob_ 3 LLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNI----KFTTFDLGGHIQARRLWKDYFPEVN----GIVFL 74 (167) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCCCCCCCSCEEEEEEETTE----EEEEEECCCSGGGTTSGGGGCTTCC----EEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEE----EEEEEEEECHHHHCCCHHHHHCCCC----EEEEE T ss_conf 899836999899999998379212454467667620300478----9998531001121000123323651----78997 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 40101368999999999999999973278988999999999999998504555666655344567666776534478887 Q Ver_Hs_NP_0572 150 VDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLGA 229 (523) Q Consensus 150 lDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLge 229 (523) .|.+.++. ++.+..|+.-+. T Consensus 75 ~D~~~~~~-~~~~~~~l~~~~----------------------------------------------------------- 94 (167) T d1m2ob_ 75 VDAADPER-FDEARVELDALF----------------------------------------------------------- 94 (167) T ss_dssp EETTCGGG-HHHHHHHHHHHH----------------------------------------------------------- T ss_pred CCCCCCCC-HHHHHHHHHHHH----------------------------------------------------------- T ss_conf 04577456-678999999998----------------------------------------------------------- Q ss_pred CCCCCCCCCCEEEEEECCCH--------------------------------HHHHHHCCCCCHHHHHHHHHHH Q ss_conf 62300588327998507412--------------------------------5555420577478999999999 Q Ver_Hs_NP_0572 230 DTLTHNLGIPVLVVCTKCDA--------------------------------ISVLEKEHDYRDEHFDFFQSHI 271 (523) Q Consensus 230 g~Lt~NLGiPivVVctKsD~--------------------------------ie~LEKe~~y~dE~fDfIqq~L 271 (523) .....-++|++||++|+|. +++=-+...==+|-||+|.||| T Consensus 95 -~~~~~~~~piiiv~nK~Dl~~~~~~~ei~~~l~l~~~~~~~~~~~~~~~~i~~~Sa~tg~Gi~e~~~~l~~~~ 167 (167) T d1m2ob_ 95 -NIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 167 (167) T ss_dssp -TCGGGTTCCEEEEEECTTSTTCCCHHHHHHHTTCSSCCC---CCSSCCEEEEECBTTTTBSHHHHHHHHHTTC T ss_pred -HHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHC T ss_conf -6332079808999733488656798899988070112112331045863699985135898799999999609 No 35 >d1etu_1 c.37.1.8 (5-200) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Escherichia coli} Probab=97.82 E-value=2.1e-05 Score=52.60 Aligned_columns=150 Identities=25% Q ss_pred EEEEEECCCCCHHHHHHHHHH-------------------CCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCC Q ss_conf 588973699767899999742-------------------0146888652145640450000432524636865862432 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQG-------------------IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHK 129 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~-------------------~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~ 129 (523) ||.|+|..++|||||+.+|.+ .++...|.-.+-.+..+..+++ .+-++|-+ +|. T Consensus 9 nI~iiGh~d~GKTTL~~~L~~~~~~~~~~~~~~~~~~d~~~~e~~~giT~~~~~~~~~~~~~------~i~~iDTP-GH~ 81 (196) T d1etu_1 9 NVGTIGHVDHGKTTLTAAITTVLAKTYGGAAXXXXXXXXXXXXXXXGITINTSHVEYDTPTR------HYAHVDCP-GHA 81 (196) T ss_dssp EEEEECSSSSSHHHHHHHHHHHHHHHH-------------------CCCCCCEEEEEECSSC------EEEEEECS-SHH T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCC------EEEEEECC-HHH T ss_conf 89998212788789999999987665210111000000112223453367237899843883------59997263-256 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC Q ss_conf 45556787002666455655401013689999999999999999732789889999999999999985045556666553 Q Ver_Hs_NP_0572 130 GLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQ 209 (523) Q Consensus 130 ~LLK~aLt~~si~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~ 209 (523) .+.+.....-++.+ ++|+|+|-++. ++.|-.+-+..++ T Consensus 82 ~f~~~~~~~~~~aD-~aiLVIda~eg--i~~qt~e~l~~~~--------------------------------------- 119 (196) T d1etu_1 82 DYVKNMITGAAQMD-GAILVVAATDG--PMPQTREHILLGR--------------------------------------- 119 (196) T ss_dssp HHHHHHHSSTTCCS-EEEEEECTTSC--SCHHHHHHHHHHH--------------------------------------- T ss_pred HHHHHHHHHHHHHH-HEEEEECCCCC--CCCHHHHHHHHHH--------------------------------------- T ss_conf 78999999988860-13302114456--6624789999999--------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC-----CEEE Q ss_conf 445676667765344788876230058832-7998507412555542057747899999999999999718-----7688 Q Ver_Hs_NP_0572 210 RRNTASQEDKDDSVVVPLGADTLTHNLGIP-VLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYG-----AALI 283 (523) Q Consensus 210 ~~~~~~~~~~d~~v~lPLgeg~Lt~NLGiP-ivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YG-----AaLi 283 (523) .+|+| ++||.+|.|.+ ..+|.++.+.+.+|.+..+|+ +-+| T Consensus 120 -------------------------~~~~~~iiVviNKiDli--------~~~~~~~~~~~~~~~~l~~~~~~~~~~piv 166 (196) T d1etu_1 120 -------------------------QVGVPYIIVFLNKCDMV--------DDEELLELVEMEVRELLSQYDFPGDDTPIV 166 (196) T ss_dssp -------------------------HHTCCEEEEEEECCSSC--------CCHHHHHHHHHHHHHHHHHHSSCSSSSCEE T ss_pred -------------------------HCCCCEEEEEECCCCCC--------CCHHHHHHHHHHHHHHHHHCCCCCCCEEEE T ss_conf -------------------------71896189970456888--------878999999999998764138998845589 Q ss_pred EECCCCH------------HHHHHHHHHH Q ss_conf 8326636------------7899999999 Q Ver_Hs_NP_0572 284 YTSVKEN------------KNIDLVYKYI 300 (523) Q Consensus 284 YTS~ke~------------knl~LLykYl 300 (523) +.|++.. +.++.+-+|+ T Consensus 167 ~iSA~kg~~g~~~~~~~i~~l~~~i~~~i 195 (196) T d1etu_1 167 RGSALKALEGDAEWEAKILELAGFLDSYI 195 (196) T ss_dssp EECHHHHHHSCSHHHHHHHHHHHHHHHHC T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHC T ss_conf 71024333441578999999999986307 No 36 >d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli} Probab=97.77 E-value=1.3e-05 Score=53.95 Aligned_columns=156 Identities=17% Q ss_pred CCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECC---------CCCCCCCCCCCCC Q ss_conf 7658897369976789999974201468886521456404500004325246368658---------6243245556787 Q Ver_Hs_NP_0572 67 GKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDG---------DLYHKGLLKFSLD 137 (523) Q Consensus 67 ~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg---------~~~~~~LLK~aLt 137 (523) +..|.|+|..++|||||+.+|.+.+.......-.-+...+......+.....+|-..| .........-.+. T Consensus 5 ~~~I~iiG~~n~GKSSLin~l~~~~~~~~~~~~~tt~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~~~ 84 (179) T d1egaa1 5 CGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIG 84 (179) T ss_dssp EEEEEEECSSSSSHHHHHHHHHTCSEEECCCCSSCCSSCEEEEEEETTEEEEEESSSSCCHHHHHHHHHHHTCCTTSCCC T ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCEEEEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 53689983599978899999856740121155625665005677411000110157875201222222333223322233 Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC Q ss_conf 00266645565540101368999999999999999973278988999999999999998504555666655344567666 Q Ver_Hs_NP_0572 138 AVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQE 217 (523) Q Consensus 138 ~~si~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~ 217 (523) .-.+ +++++|-+++-..-+.+..|++.. T Consensus 85 ~~d~----vi~vvD~~~~~~~~~~~~~~~~~~------------------------------------------------ 112 (179) T d1egaa1 85 DVEL----VIFVVEGTRWTPDDEMVLNKLREG------------------------------------------------ 112 (179) T ss_dssp CEEE----EEEEEETTCCCHHHHHHHHHHHSS------------------------------------------------ T ss_pred HHHH----HHHHCCCCCCCHHHHHHHHHHHHC------------------------------------------------ T ss_conf 2322----000002566402456665555530------------------------------------------------ Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC-CEEEEECCCCHHHHHHH Q ss_conf 77653447888762300588327998507412555542057747899999999999999718-76888326636789999 Q Ver_Hs_NP_0572 218 DKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYG-AALIYTSVKENKNIDLV 296 (523) Q Consensus 218 ~~d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YG-AaLiYTS~ke~knl~LL 296 (523) ++|++||.+|+|.+ +...-+...+..+..+.+ +.++++|+++..|++-| T Consensus 113 -------------------~~piIiv~NK~D~~-----------~~~~~~~~~~~~~~~~~~~~~~~~iSA~~~~gi~~l 162 (179) T d1egaa1 113 -------------------KAPVILAVNKVDNV-----------QEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTI 162 (179) T ss_dssp -------------------SSCEEEEEESTTTC-----------CCHHHHHHHHHHHHTTSCCSEEEECCTTTTTTHHHH T ss_pred -------------------CCCEEEECCCCCCC-----------CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH T ss_conf -------------------67253310562331-----------365578899999998359986799733568888899 Q ss_pred HHHHHHHH Q ss_conf 99999876 Q Ver_Hs_NP_0572 297 YKYIVQKL 304 (523) Q Consensus 297 ykYl~HrL 304 (523) ...|..+| T Consensus 163 ~~~i~~~l 170 (179) T d1egaa1 163 AAIVRKHL 170 (179) T ss_dssp HHHHHTTC T ss_pred HHHHHHHC T ss_conf 99999867 No 37 >d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus} Probab=97.76 E-value=1.5e-05 Score=53.53 Aligned_columns=149 Identities=23% Q ss_pred EEEEEECCCCCHHHHHHHH----------------------------------HHCCCCCCCCCCEEEEEECCCHHCCHH Q ss_conf 5889736997678999997----------------------------------420146888652145640450000432 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKI----------------------------------QGIEEYKKGRGLEYLYLNVHDEDRDDQ 114 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~L----------------------------------q~~e~~kKg~gLeY~Yl~V~DeDrdd~ 114 (523) ||.|+|..++|||||+.+| .-.++..+|--.++.+....-..+ T Consensus 5 nv~iiGhvd~GKSTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~er~rgiti~~~~~~~~~~~~--- 81 (224) T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERERGVTINLTFMRFETKKY--- 81 (224) T ss_dssp EEEEEESTTSSHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHC-----------CEEECSSC--- T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCC--- T ss_conf 89998414888789999999871672068899999887553100123114545764311256632102456604685--- Q ss_pred HHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH Q ss_conf 524636865862432455567870026664556554----0101368999999999999999973278988999999999 Q Ver_Hs_NP_0572 115 TRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVV----DMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKL 190 (523) Q Consensus 115 ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvIvl----DmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~ 190 (523) ++-++|-+ +|..+++..+..-++.+..|+++- .+.+-+....|.++-+.++. T Consensus 82 ---~i~~iD~P-GH~~f~~~~~~g~~~~D~ailVVda~~G~~~~~~~v~~qt~eh~~~~~-------------------- 137 (224) T d1jnya3 82 ---FFTIIDAP-GHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAK-------------------- 137 (224) T ss_dssp ---EEEECCCS-SSTTHHHHHHHTSSCCSEEEEEEECSTTHHHHHHSTTCHHHHHHHHHH-------------------- T ss_pred ---EEEEECCC-CCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH-------------------- T ss_conf ---78742376-511347889987655331466875556775220134468999999999-------------------- Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEEEECCCHHHHHHHCCCCCHHHHHHHHH Q ss_conf 9999985045556666553445676667765344788876230058832-799850741255554205774789999999 Q Ver_Hs_NP_0572 191 IRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLGADTLTHNLGIP-VLVVCTKCDAISVLEKEHDYRDEHFDFFQS 269 (523) Q Consensus 191 i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLgeg~Lt~NLGiP-ivVVctKsD~ie~LEKe~~y~dE~fDfIqq 269 (523) .+|++ ++|+++|.|.++ ..|..+.|+-|+. T Consensus 138 --------------------------------------------~~g~~~iIV~iNKiD~~~-----~~~~~~~~~~i~~ 168 (224) T d1jnya3 138 --------------------------------------------TMGLDQLIVAVNKMDLTE-----PPYDEKRYKEIVD 168 (224) T ss_dssp --------------------------------------------HTTCTTCEEEEECGGGSS-----STTCHHHHHHHHH T ss_pred --------------------------------------------HHCCCCEEEEEECCCCCC-----CCCHHHHHHHHHH T ss_conf --------------------------------------------807980899983688888-----5513689999999 Q ss_pred HHHHHHHHHC-----CEEEEECCCCHHHH Q ss_conf 9999999718-----76888326636789 Q Ver_Hs_NP_0572 270 HIRKFCLRYG-----AALIYTSVKENKNI 293 (523) Q Consensus 270 ~LR~icL~YG-----AaLiYTS~ke~knl 293 (523) .++.++-+|| +..|..|.....|+ T Consensus 169 ~i~~~l~~~g~~~~~i~~IPISA~~G~ni 197 (224) T d1jnya3 169 QVSKFMRSYGFNTNKVRFVPVVAPSGDNI 197 (224) T ss_dssp HHHHHHHHTTCCCTTCEEEECBTTTTBTT T ss_pred HHHHHHHHHCCCCCCEEEEEECCCCCCCC T ss_conf 99999997188977642786106658856 No 38 >d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis} Probab=97.71 E-value=0.00019 Score=46.11 Aligned_columns=154 Identities=23% Q ss_pred EEEEEECCCCCHHHHHHHHHHCC---CCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHH Q ss_conf 58897369976789999974201---468886521456404500004325246368658624324555678700266645 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIE---EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTL 145 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e---~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TL 145 (523) .|.|+|..++|||||+.+|.+.. .+..-.+..+.+.-...+++. T Consensus 25 ~I~iiG~~n~GKSSLin~L~~~~~~~~~~~~~~~t~~~~~~~~~~~~--------------------------------- 71 (195) T d1svia_ 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDEL--------------------------------- 71 (195) T ss_dssp EEEEEEBTTSSHHHHHHHHHTC-------------CCEEEEEETTTE--------------------------------- T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCE--------------------------------- T ss_conf 89998359997899999985786257631567511334676205650--------------------------------- Q ss_pred HHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC Q ss_conf 565540101------3689999999999999999732------7898899999999999999850455566665534456 Q Ver_Hs_NP_0572 146 VMLVVDMSK------PWTALDSLQKWASVVREHVDKL------KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNT 213 (523) Q Consensus 146 VvIvlDmS~------PWt~m~qL~~Wi~vLrehi~~L------~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~ 213 (523) .++||.- ++...+..+.++.....++... ....+...+...++...-+.+ T Consensus 72 --~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~v~d~~~~~~~~~~~~~~~~~~~---------------- 133 (195) T d1svia_ 72 --HFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYY---------------- 133 (195) T ss_dssp --EEEECCCBCCCSSCHHHHHHHHHHHHHHHHHCTTEEEEEEEEETTSCCCHHHHHHHHHHHHT---------------- T ss_pred --EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC---------------- T ss_conf --79980775433465035778999887654455442221110123457625678876420001---------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHH Q ss_conf 76667765344788876230058832799850741255554205774789999999999999971876888326636789 Q Ver_Hs_NP_0572 214 ASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNI 293 (523) Q Consensus 214 ~~~~~~d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl 293 (523) ++|++||.+|+|.+ -.++....+++..+.+-+....-+|++|++...++ T Consensus 134 -----------------------~~p~ivv~NK~Dl~--------~~~~~~~~~~~i~~~l~~~~~~~i~~vSA~tg~Gi 182 (195) T d1svia_ 134 -----------------------GIPVIVIATKADKI--------PKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGK 182 (195) T ss_dssp -----------------------TCCEEEEEECGGGS--------CGGGHHHHHHHHHHHHTCCTTSEEEECCTTTCTTH T ss_pred -----------------------CCHHEEEEECCCCC--------CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCH T ss_conf -----------------------10001322001467--------87578899999999973058996899854668788 Q ss_pred HHHHHHHHHHH Q ss_conf 99999999876 Q Ver_Hs_NP_0572 294 DLVYKYIVQKL 304 (523) Q Consensus 294 ~LLykYl~HrL 304 (523) +-+..+|--.+ T Consensus 183 ~el~~~i~~~i 193 (195) T d1svia_ 183 DEAWGAIKKMI 193 (195) T ss_dssp HHHHHHHHHHH T ss_pred HHHHHHHHHHH T ss_conf 99999999984 No 39 >d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=97.67 E-value=1.4e-05 Score=53.78 Aligned_columns=153 Identities=22% Q ss_pred EEEEEECCCCCHHHHHHHH----------------HHCCCCCCCCCCEEEEEECCCHHCCHH--HHCCEEEECCC----- Q ss_conf 5889736997678999997----------------420146888652145640450000432--52463686586----- Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKI----------------QGIEEYKKGRGLEYLYLNVHDEDRDDQ--TRCNVWILDGD----- 125 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~L----------------q~~e~~kKg~gLeY~Yl~V~DeDrdd~--ar~~vWiLdg~----- 125 (523) ||.++|.-++|||||+.+| .+.....++.---+.++|-..+.|+-. ...+++.++.. T Consensus 8 Ni~viGHVDhGKTTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~Er~rgiti~~~~~~~~~~~~~i~ 87 (239) T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYQVT 87 (239) T ss_dssp EEEEEECTTSCHHHHHHHHHHHHSCSSHHHHHHHHHHGGGGSSSCCCHHHHHHHHHHHHHTTCCCSCSCEEEECSSEEEE T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCEEECCEEEECCCCCEEE T ss_conf 89999631688689999999983774446888887666542002232024316875300137312101024304583689 Q ss_pred ----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH Q ss_conf ----2432455567870026664556554010136-----8999999999999999973278988999999999999998 Q Ver_Hs_NP_0572 126 ----LYHKGLLKFSLDAVSLKDTLVMLVVDMSKPW-----TALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQE 196 (523) Q Consensus 126 ----~~~~~LLK~aLt~~si~~TLVvIvlDmS~PW-----t~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~ 196 (523) |+|..+++..++.-++.+. +|+|+|-.+.+ ....|.++-+.++. T Consensus 88 iIDtPGH~df~~~mi~g~~~~D~-aiLVVda~~g~~~~~~~~~~Qt~eh~~~~~-------------------------- 140 (239) T d1f60a3 88 VIDAPGHRDFIKNMITGTSQADC-AILIIAGGVGEFEAGISKDGQTREHALLAF-------------------------- 140 (239) T ss_dssp EEECCCCTTHHHHHHHSSSCCSE-EEEEEECSHHHHHHHTCTTSHHHHHHHHHH-------------------------- T ss_pred EEECCCCCCHHHHHHHHHHHCCE-EEEEEECCCCCCCCCHHHHHHHHHHHHHHH-------------------------- T ss_conf 98578763036788876534026-789972566442322014389999999999-------------------------- Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHH Q ss_conf 5045556666553445676667765344788876230058832-799850741255554205774789999999999999 Q Ver_Hs_NP_0572 197 YVEPGEDFPASPQRRNTASQEDKDDSVVVPLGADTLTHNLGIP-VLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFC 275 (523) Q Consensus 197 y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLgeg~Lt~NLGiP-ivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~ic 275 (523) .||++ ++|+++|.|.+ +|.++.|+-|.+-+..|+ T Consensus 141 --------------------------------------~lgv~~iiv~iNKmD~v-------~~~~~r~~~i~~ei~~~l 175 (239) T d1f60a3 141 --------------------------------------TLGVRQLIVAVNKMDSV-------KWDESRFQEIVKETSNFI 175 (239) T ss_dssp --------------------------------------HTTCCEEEEEEECGGGG-------TTCHHHHHHHHHHHHHHH T ss_pred --------------------------------------HCCCCEEEEEEECCCCC-------CCCHHHHHHHHHHHHHHH T ss_conf --------------------------------------71898389998236887-------778889999999998888 Q ss_pred HHHC-----CEEEEECCCCHHHH Q ss_conf 9718-----76888326636789 Q Ver_Hs_NP_0572 276 LRYG-----AALIYTSVKENKNI 293 (523) Q Consensus 276 L~YG-----AaLiYTS~ke~knl 293 (523) .+.| +..|-.|.....|+ T Consensus 176 ~~~g~~~~~~~~iPiSa~~G~Ni 198 (239) T d1f60a3 176 KKVGYNPKTVPFVPISGWNGDNM 198 (239) T ss_dssp HHHTCCGGGCCEEECCTTTCBTT T ss_pred HHCCCCCCCEEEEEEECCCCCCC T ss_conf 75188887700787525645755 No 40 >d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial} Probab=97.64 E-value=6.6e-05 Score=49.25 Aligned_columns=154 Identities=25% Q ss_pred EEEEEECCCCCHHHHHHHHHHC-------------------CCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCC Q ss_conf 5889736997678999997420-------------------146888652145640450000432524636865862432 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGI-------------------EEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHK 129 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~-------------------e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~ 129 (523) ||.|+|.-++|||||+.+|.+. ++...|--.+..+.......+. +-++|-+ +|. T Consensus 5 ni~iiGhvd~GKSTL~~~L~~~~~~~~~~~~~~~~~~D~~~~E~~rgiTi~~~~~~~~~~~~~------~~~iDtP-Gh~ 77 (196) T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARH------YAHTDCP-GHA 77 (196) T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTSBCCCCHHHHHSCCEEEETTEEEECEEEEEECSSCE------EEEEECS-SHH T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEECCCEEEEEECCCCE------EEEECCC-HHH T ss_conf 889986316886789999999987520024455654067642010540002047897125532------4652330-034 Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC Q ss_conf 45556787002666455655401013689999999999999999732789889999999999999985045556666553 Q Ver_Hs_NP_0572 130 GLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQ 209 (523) Q Consensus 130 ~LLK~aLt~~si~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~ 209 (523) .+++..+..-+..+ .+|+|+|-.+. +..|-.+-+.++. T Consensus 78 ~f~~~~~~~~~~aD-~aiLVVda~~g--~~~qt~e~~~~~~--------------------------------------- 115 (196) T d1d2ea3 78 DYVKNMITGTAPLD-GCILVVAANDG--PMPQTREHLLLAR--------------------------------------- 115 (196) T ss_dssp HHHHHHHHTSSCCS-EEEEEEETTTC--SCHHHHHHHHHHH--------------------------------------- T ss_pred HHHHHHHHHHHHHC-CEEEEEECCCC--CCHHHHHHHHHHH--------------------------------------- T ss_conf 67889999876521-04688733563--1034799999999--------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC-----CEEE Q ss_conf 445676667765344788876230058832-7998507412555542057747899999999999999718-----7688 Q Ver_Hs_NP_0572 210 RRNTASQEDKDDSVVVPLGADTLTHNLGIP-VLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYG-----AALI 283 (523) Q Consensus 210 ~~~~~~~~~~d~~v~lPLgeg~Lt~NLGiP-ivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YG-----AaLi 283 (523) .+|++ ++||++|.|.++ .+|.++++..-+|.++-++| +.+| T Consensus 116 -------------------------~~g~~~iiv~iNKiDlv~--------d~~~~~~~~~~~~~~l~~~~~~~~~~pii 162 (196) T d1d2ea3 116 -------------------------QIGVEHVVVYVNKADAVQ--------DSEMVELVELEIRELLTEFGYKGEETPII 162 (196) T ss_dssp -------------------------HTTCCCEEEEEECGGGCS--------CHHHHHHHHHHHHHHHHHTTSCTTTSCEE T ss_pred -------------------------HCCCCEEEEEECCCCCCC--------CHHHHHHHHHHHHHHHHHCCCCCCCEEEE T ss_conf -------------------------648934898604578888--------78898876446677776427886432058 Q ss_pred EECCCCH----------HHHHHHHHHHHHHH Q ss_conf 8326636----------78999999999876 Q Ver_Hs_NP_0572 284 YTSVKEN----------KNIDLVYKYIVQKL 304 (523) Q Consensus 284 YTS~ke~----------knl~LLykYl~HrL 304 (523) ++|.... ++++-|...+.-++ T Consensus 163 piSA~~g~~~~~~~~~~~~i~~Lldai~~~i 193 (196) T d1d2ea3 163 VGSALCALEQRDPELGLKSVQKLLDAVDTYI 193 (196) T ss_dssp ECCHHHHHTTCCTTTTHHHHHHHHHHHHHHS T ss_pred EHHCCCCCCCCCCCCCCCCHHHHHHHHHHHC T ss_conf 7100002112673334368789999998527 No 41 >d1exma3 c.37.1.8 (A:3-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus} Probab=97.63 E-value=1.9e-05 Score=52.88 Aligned_columns=149 Identities=23% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCC--CEEEEEECCCHHCC------------HHHHCCEEEECCCCCCCCCCCC Q ss_conf 588973699767899999742014688865--21456404500004------------3252463686586243245556 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRG--LEYLYLNVHDEDRD------------DQTRCNVWILDGDLYHKGLLKF 134 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~g--LeY~Yl~V~DeDrd------------d~ar~~vWiLdg~~~~~~LLK~ 134 (523) ||.|+|..++|||||+.+|.+........+ -++.++|-..+.|. .....++-++|-+ +|..+++. T Consensus 11 nI~iiGhvd~GKSTL~~~Ll~~~~~~~~~~~~~~~~~~D~~~~E~~rgiTi~~~~~~~~~~~~~i~~iDtP-Gh~~f~~~ 89 (210) T d1exma3 11 NVGTIGHVDHGKTTLTAALTFVTAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCP-GHADYIKN 89 (210) T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHHCTTCCCCCHHHHSCSHHHHHHTSCCSCEEEEEECSSCEEEEEECC-CSGGGHHH T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHCCCEEEEEEEEEEECCCEEEEECCC-CHHHHHHH T ss_conf 89998423888789999998875210011011221102455012113503423689984115148873277-46889999 Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC Q ss_conf 78700266645565540101368999999999999999973278988999999999999998504555666655344567 Q Ver_Hs_NP_0572 135 SLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTA 214 (523) Q Consensus 135 aLt~~si~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~ 214 (523) .+..-...+ .+|+|+|-.+. ++.|-++-+.++. T Consensus 90 ~~~~~~~aD-~aiLVVda~~G--~~~qt~~~l~~~~-------------------------------------------- 122 (210) T d1exma3 90 MITGAAQMD-GAILVVSAADG--PMPQTREHILLAR-------------------------------------------- 122 (210) T ss_dssp HHHHHTTCS-SEEEEEETTTC--SCHHHHHHHHHHH-------------------------------------------- T ss_pred HHHHHHHHC-EEEEEECCCCC--CCHHHHHHHHHHH-------------------------------------------- T ss_conf 999877633-44334214332--2024689999999-------------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC-EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC-----CEEEEECCC Q ss_conf 6667765344788876230058832-7998507412555542057747899999999999999718-----768883266 Q Ver_Hs_NP_0572 215 SQEDKDDSVVVPLGADTLTHNLGIP-VLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYG-----AALIYTSVK 288 (523) Q Consensus 215 ~~~~~d~~v~lPLgeg~Lt~NLGiP-ivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YG-----AaLiYTS~k 288 (523) .+|+| ++|+++|.|.+ + .+|.++.|.+.+|.++-+|| +..+..|.. T Consensus 123 --------------------~~g~~~iiv~iNKiDlv-------~-~~~~~~~i~~ev~~~l~~~~~~~~~ipii~iSal 174 (210) T d1exma3 123 --------------------QVGVPYIVVFMNKVDMV-------D-DPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSAL 174 (210) T ss_dssp --------------------HTTCCCEEEEEECGGGC-------C-CHHHHHHHHHHHHHHHHHTTSCTTTSCEEECCHH T ss_pred --------------------HCCCCCEEEEEECCCCC-------C-CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHH T ss_conf --------------------72897168996135888-------8-5899999999999865313888532216860012 Q ss_pred CHHHH Q ss_conf 36789 Q Ver_Hs_NP_0572 289 ENKNI 293 (523) Q Consensus 289 e~knl 293 (523) ..-++ T Consensus 175 ~g~~~ 179 (210) T d1exma3 175 LALEQ 179 (210) T ss_dssp HHHHH T ss_pred HHHHH T ss_conf 44444 No 42 >d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi} Probab=97.52 E-value=0.00039 Score=44.00 Aligned_columns=163 Identities=18% Q ss_pred EEEEEECCCCCHHHHHHHHHH--------CCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCC--- Q ss_conf 588973699767899999742--------014688865214564045000043252463686586243245556787--- Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQG--------IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLD--- 137 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~--------~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt--- 137 (523) ||-|.|..++|||||+.+|.+ .......+-..+.+.....+.+.....-...............++.+- T Consensus 7 ~VaiiG~~naGKSTLln~L~g~~~~~~~~~~~~g~T~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~i~Dtp 86 (195) T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAP 86 (195) T ss_dssp EEEEECSTTSSHHHHHHHHHTCCCC--CGGGGSCSSSCCEEEEEEEEECTTTCCEESSSBCTTTCCBCEEEEEEEEEECS T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHEEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECC T ss_conf 89998406987788999999877666654431562222010111000354201122100011100120365079997175 Q ss_pred --CCHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC Q ss_conf --00266645--------56554010136899999999999999997327898899999999999999850455566665 Q Ver_Hs_NP_0572 138 --AVSLKDTL--------VMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPAS 207 (523) Q Consensus 138 --~~si~~TL--------VvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s 207 (523) ..-+.++. +++++|-.......+.-..+..... T Consensus 87 G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~------------------------------------- 129 (195) T d1kk1a3 87 GHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQI------------------------------------- 129 (195) T ss_dssp SHHHHHHHHHHCGGGCSEEEEEEETTSCSSCHHHHHHHHHHHH------------------------------------- T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH------------------------------------- T ss_conf 5589999999988775444433220012111026789999997------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC---CEEEE Q ss_conf 534456766677653447888762300588327998507412555542057747899999999999999718---76888 Q Ver_Hs_NP_0572 208 PQRRNTASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYG---AALIY 284 (523) Q Consensus 208 ~~~~~~~~~~~~d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YG---AaLiY 284 (523) ....|+++|.+|+|.++ ++.++-....+|.+.-.++ +-+|+ T Consensus 130 ---------------------------~~~~~i~~~vNK~D~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ii~ 173 (195) T d1kk1a3 130 ---------------------------IGQKNIIIAQNKIELVD---------KEKALENYRQIKEFIEGTVAENAPIIP 173 (195) T ss_dssp ---------------------------HTCCCEEEEEECGGGSC---------HHHHHHHHHHHHHHHTTSTTTTCCEEE T ss_pred ---------------------------HCCCEEEEEEECCCCCC---------HHHHHHHHHHHHHHHHHCCCCCEEEEE T ss_conf ---------------------------40880566551135545---------568999999999987431788703898 Q ss_pred ECCCCHHHHHHHHHHHHHHH Q ss_conf 32663678999999999876 Q Ver_Hs_NP_0572 285 TSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 285 TS~ke~knl~LLykYl~HrL 304 (523) +|.+...|++-|...|..++ T Consensus 174 vSA~~G~gid~L~~~I~~~i 193 (195) T d1kk1a3 174 ISALHGANIDVLVKAIEDFI 193 (195) T ss_dssp CBTTTTBSHHHHHHHHHHHS T ss_pred EECCCCCCHHHHHHHHHHHC T ss_conf 30667899899999999746 No 43 >d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli} Probab=97.52 E-value=0.00018 Score=46.31 Aligned_columns=168 Identities=20% Q ss_pred HHCCCCCCCCCC--CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCC Q ss_conf 641445425787--658897369976789999974201468886521456404500004325246368658624324555 Q Ver_Hs_NP_0572 56 VSTRSRSKLPAG--KNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLK 133 (523) Q Consensus 56 v~t~~~~klp~~--KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK 133 (523) +++-+-..||.+ .+|.|+|..++|||||+.+|.+.+..........+. ..-..........+|.+++...+..... T Consensus 3 ~~~~~~~~~p~~~~~~I~iiG~~~vGKSSLin~L~~~~~~~~~~~~~~tt--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (188) T d1puia_ 3 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRT--QLINLFEVADGKRLVDLPGYGYAEVPEE 80 (188) T ss_dssp EEESSGGGSSCSCSEEEEEEECTTSSHHHHHTTTCCC---------------CCEEEEEEETTEEEEECCCCC------C T ss_pred CCCCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCE--EEEEEEEEECCEEEEEECCCCCCCCCHH T ss_conf 45534655879888678997369987889999985787324305656401--2234554202327776401001257635 Q ss_pred CCCCCCHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 678700266645---------56554010136899999999999999997327898899999999999999850455566 Q Ver_Hs_NP_0572 134 FSLDAVSLKDTL---------VMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDF 204 (523) Q Consensus 134 ~aLt~~si~~TL---------VvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~ 204 (523) .......+.... ++++.|.... +.++-...+..++.. T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~~~~~~~~~~-------------------------------- 126 (188) T d1puia_ 81 MKRKWQRALGEYLEKRQSLQGLVVLMDIRHP--LKDLDQQMIEWAVDS-------------------------------- 126 (188) T ss_dssp CHHHHHHHHHHHHHHCTTEEEEEEEEETTSC--CCHHHHHHHHHHHHT-------------------------------- T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHC--CHHHHHHHHHHHHHH-------------------------------- T ss_conf 6778776667899876432333210001001--117899999999873-------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC--EE Q ss_conf 6655344567666776534478887623005883279985074125555420577478999999999999997187--68 Q Ver_Hs_NP_0572 205 PASPQRRNTASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGA--AL 282 (523) Q Consensus 205 ~~s~~~~~~~~~~~~d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGA--aL 282 (523) ++|++||.+|+|. ...++..-..+.++.....++- -. T Consensus 127 --------------------------------~~p~iiv~nK~D~---------~~~~~~~~~~~~~~~~~~~~~~~~~i 165 (188) T d1puia_ 127 --------------------------------NIAVLVLLTKADK---------LASGARKAQLNMVREAVLAFNGDVQV 165 (188) T ss_dssp --------------------------------TCCEEEEEECGGG---------SCHHHHHHHHHHHHHHHGGGCSCEEE T ss_pred --------------------------------HHHHHHHHHHCCC---------CCHHHHHHHHHHHHHHHHHHCCCCCE T ss_conf --------------------------------2245433201156---------88778999999999999850699837 Q ss_pred EEECCCCHHHHHHHHHHH Q ss_conf 883266367899999999 Q Ver_Hs_NP_0572 283 IYTSVKENKNIDLVYKYI 300 (523) Q Consensus 283 iYTS~ke~knl~LLykYl 300 (523) +.+|.+...+++-|...| T Consensus 166 ~~~SA~~g~gI~eL~~~l 183 (188) T d1puia_ 166 ETFSSLKKQGVDKLRQKL 183 (188) T ss_dssp EECBTTTTBSHHHHHHHH T ss_pred EEEECCCCCCHHHHHHHH T ss_conf 997435688888999999 No 44 >d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima} Probab=97.38 E-value=3.9e-05 Score=50.76 Aligned_columns=151 Identities=19% Q ss_pred EEEEEECCCCCHHHHHHHHHHCC----CCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHH Q ss_conf 58897369976789999974201----46888652145640450000432524636865862432455567870026664 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIE----EYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDT 144 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e----~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~T 144 (523) .|+++|..++|||||+.+|.+.+ ....+...+.....+...+......--.-.......+....-..-....+.++ T Consensus 2 kI~liG~~~~GKSTLin~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (160) T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSETNDLVERLGIERTLQEIEKA 81 (160) T ss_dssp EEEEECCHHHHTCHHHHHHHHHTBCCCCCSSCCSSCSCCEEEEETTEEEEEEESSCCCSSCCTTCCCCCHHHHHHHHHHC T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHC T ss_conf 78898339998889999984674214301111010000100111530257763101111343012233367899998635 Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf -5565540101368999999999999999973278988999999999999998504555666655344567666776534 Q Ver_Hs_NP_0572 145 -LVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSV 223 (523) Q Consensus 145 -LVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v 223 (523) ++++++|.++||+ .+...|+..++ T Consensus 82 d~ii~vvD~~~~~~--~~~~~~~~~l~----------------------------------------------------- 106 (160) T d1xzpa2 82 DIVLFVLDASSPLD--EEDRKILERIK----------------------------------------------------- 106 (160) T ss_dssp SEEEEEEETTSCCC--HHHHHHHHHHT----------------------------------------------------- T ss_pred CEEEEEECCCCCCC--HHHHHHHHHHC----------------------------------------------------- T ss_conf 41478641521114--56788886413----------------------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHH Q ss_conf 478887623005883279985074125555420577478999999999999997187688832663678999999999 Q Ver_Hs_NP_0572 224 VVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIV 301 (523) Q Consensus 224 ~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~ 301 (523) ..|+++|++|+|..+ ....++... -+..+.-++++|+++..+++-|...|. T Consensus 107 -------------~~~~iiv~NK~Dl~~------~~~~~~~~~--------~~~~~~~i~~iSa~~g~gi~eL~~~i~ 157 (160) T d1xzpa2 107 -------------NKRYLVVINKVDVVE------KINEEEIKN--------KLGTDRHMVKISALKGEGLEKLEESIY 157 (160) T ss_dssp -------------TSSEEEEEEECSSCC------CCCHHHHHH--------HHTCSTTEEEEEGGGTCCHHHHHHHHH T ss_pred -------------CCCEEEEEECCCCCC------CCCHHHHHH--------HHCCCCCEEEEECCCCCCHHHHHHHHH T ss_conf -------------675589972566678------346789999--------717899779985256878789999984 No 45 >d1rfla_ c.37.1.8 (A:) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli} Probab=97.12 E-value=1.4e-05 Score=53.71 Aligned_columns=156 Identities=21% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHH Q ss_conf 57876588973699767899999742014688865214564045000043252463686586243245556787002666 Q Ver_Hs_NP_0572 64 LPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKD 143 (523) Q Consensus 64 lp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~ 143 (523) +-++-+|+|+|..++|||||+.+|.+.+...-..-...+.-...-.-.-+..++.+|=.-|-......+........+.. T Consensus 4 ~~~~~kI~ivG~~~~GKStLin~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~i~DtpG~~~~~~~~~~~~~~~~~~~ 83 (172) T d1rfla_ 4 LREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQE 83 (172) T ss_dssp CCCCCEEEECSSSSSSSHHHHHHHSSCSSCCCCCCSSCCTTCCCSCCCCSSCSSCCCCCCCSHHHHHHHHHHTSCCSCCC T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHH T ss_conf 21785799982499978999999856753032123553211125652022002322035663102201232110001233 Q ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC Q ss_conf 4----556554010136899999999999999997327898899999999999999850455566665534456766677 Q Ver_Hs_NP_0572 144 T----LVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDK 219 (523) Q Consensus 144 T----LVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~ 219 (523) . ++++|+|.+.+ ....+.+.|...+ T Consensus 84 i~~~d~ii~viD~~~~-~~~~~~~~~~~~~-------------------------------------------------- 112 (172) T d1rfla_ 84 IEQADRVLFMVDGTTT-DAVDPAEIWPEFI-------------------------------------------------- 112 (172) T ss_dssp CCCEEEEECCCCTTCC-CSTTHHHHHHHHS-------------------------------------------------- T ss_pred HHHCCCEEEEEECCCC-CCHHHHHHHHHHH-------------------------------------------------- T ss_conf 3203724899867888-8744689999999-------------------------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHH Q ss_conf 65344788876230058832799850741255554205774789999999999999971876888326636789999999 Q Ver_Hs_NP_0572 220 DDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKY 299 (523) Q Consensus 220 d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykY 299 (523) -..+-+.|+++|.+|+|.......-..+ ++..+|++|++...+++.|... T Consensus 113 ------------~~~~~~~piiiv~NK~Dl~~~~~~l~~~------------------~~~~ii~iSa~~g~gI~~L~~~ 162 (172) T d1rfla_ 113 ------------ARLPAKLPITVVRNKADITGETLGMSEV------------------NGHALIRLSARTGEGVDVLRNH 162 (172) T ss_dssp ------------SSSCCCCEECCCSCHHHHGGGTSSSSSS------------------CCSCCEECCSSSCTTSHHHHHH T ss_pred ------------HHHHCCCCEEEEECCCCCCHHHHHHHHH------------------CCCCEEEEECCCCCCHHHHHHH T ss_conf ------------8730697289960422652235778862------------------2897589843568787899999 Q ss_pred H Q ss_conf 9 Q Ver_Hs_NP_0572 300 I 300 (523) Q Consensus 300 l 300 (523) | T Consensus 163 i 163 (172) T d1rfla_ 163 L 163 (172) T ss_dssp H T ss_pred H T ss_conf 9 No 46 >d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe)} Probab=96.95 E-value=0.00068 Score=42.36 Aligned_columns=156 Identities=24% Q ss_pred EEEEEECCCCCHHHHHHHH----------------HHCCCCCCCCCCEEEEEECCCHHCCHHHHCCE-----------EE Q ss_conf 5889736997678999997----------------42014688865214564045000043252463-----------68 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKI----------------QGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNV-----------WI 121 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~L----------------q~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~v-----------Wi 121 (523) ||.|+|.-++|||||+.+| .+.....+...-.+.+++-..+.|...-.+.. +. T Consensus 26 nI~iiGhVd~GKSTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~er~rg~ti~~~~~~~~~~~~~i~ 105 (245) T d1r5ba3 26 NIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFS 105 (245) T ss_dssp EEEEEECGGGTHHHHHHHHHHHTTSSCHHHHHHHHHHTCC----------------------------CCEEECSSEEEE T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCCCCCCCCCEEECCCCEEE T ss_conf 79998414788688999999972663267899987777650333221000004545310025554332205402575047 Q ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH Q ss_conf 658624324555678700266645565540----1013689999999999999999732789889999999999999985 Q Ver_Hs_NP_0572 122 LDGDLYHKGLLKFSLDAVSLKDTLVMLVVD----MSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEY 197 (523) Q Consensus 122 Ldg~~~~~~LLK~aLt~~si~~TLVvIvlD----mS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y 197 (523) +=--|+|..+++..+..-++.+..|+++-- +.+=+....|.++-+.++. T Consensus 106 iIDtPGH~~f~~~~~~g~~~~D~AiLVVdA~~G~~~~~~~~~~qtkeh~~~~~--------------------------- 158 (245) T d1r5ba3 106 LLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLAR--------------------------- 158 (245) T ss_dssp ECCCC-----------CTTSCSEEEEEEECSTTHHHHTTSTTCCHHHHHHHHH--------------------------- T ss_pred EEECCCCCHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH--------------------------- T ss_conf 86077762146889988655121478887678874012104689999999999--------------------------- Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH Q ss_conf 045556666553445676667765344788876230058832-7998507412555542057747899999999999999 Q Ver_Hs_NP_0572 198 VEPGEDFPASPQRRNTASQEDKDDSVVVPLGADTLTHNLGIP-VLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCL 276 (523) Q Consensus 198 ~epg~d~~~s~~~~~~~~~~~~d~~v~lPLgeg~Lt~NLGiP-ivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL 276 (523) .||+| ++|+++|.|... -+|.++.|+-|..-+..|.- T Consensus 159 -------------------------------------~l~i~~~IV~vNKiD~~~-----~~~~~~~~~~i~~~i~~~l~ 196 (245) T d1r5ba3 159 -------------------------------------TQGINHLVVVINKMDEPS-----VQWSEERYKECVDKLSMFLR 196 (245) T ss_dssp -------------------------------------HTTCSSEEEEEECTTSTT-----CSSCHHHHHHHHHHHHHHHH T ss_pred -------------------------------------HHCCCCEEEEEECCCCCC-----CCCHHHHHHHHHHHHHHHHH T ss_conf -------------------------------------807994699984137776-----55027899999999999999 Q ss_pred HHCC-------EEEEECCCCHHHH Q ss_conf 7187-------6888326636789 Q Ver_Hs_NP_0572 277 RYGA-------ALIYTSVKENKNI 293 (523) Q Consensus 277 ~YGA-------aLiYTS~ke~knl 293 (523) +.++ ..|-+|.....|+ T Consensus 197 ~~~~~~~~~~v~~IPiSA~~G~ni 220 (245) T d1r5ba3 197 RVAGYNSKTDVKYMPVSAYTGQNV 220 (245) T ss_dssp HHHCCCHHHHEEEEECBTTTTBTT T ss_pred HHHCCCCCCCEEEEEEECCCCCCC T ss_conf 850557666633887006778854 No 47 >d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae)} Probab=96.89 E-value=0.00059 Score=42.78 Aligned_columns=126 Identities=19% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHH Q ss_conf 58897369976789999974201468886521456404500004325246368658624324555678700266645565 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVML 148 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TLVvI 148 (523) .|+|+|..++|||||+.+|..-+...--...+-... ...+...+.+|-+.|-..+..++.-......-.-..||+ T Consensus 5 ~V~i~G~~~~GKTsLl~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~liDtpG~~~~~~~~~~~~~~~~~~~d~iI~ 79 (209) T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTDSVRPTVVSQEPLSA-----ADYDGSGVTLVDFPGHVKLRYKLSDYLKTRAKFVKGLIF 79 (209) T ss_dssp EEEEECSTTSSHHHHHHHHHHSSCCCBCCCSSCEEE-----TTGGGSSCEEEECCCCGGGTHHHHHHHHHHGGGEEEEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCEECCEEEEE-----EEECCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 899983699978999999846831330201004889-----863677999987457223689999999863367328999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 54010136899999999999999997327898899999999999999850455566665534456766677653447888 Q Ver_Hs_NP_0572 149 VVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLG 228 (523) Q Consensus 149 vlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLg 228 (523) |+|-+..=.-+++..+|+.=+...+.... T Consensus 80 VvDs~~~~~~~~~~~~~l~~il~~~~~~~--------------------------------------------------- 108 (209) T d1nrjb_ 80 MVDSTVDPKKLTTTAEFLVDILSITESSC--------------------------------------------------- 108 (209) T ss_dssp EEETTSCTTCCHHHHHHHHHHHHHHHHHS--------------------------------------------------- T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHHH--------------------------------------------------- T ss_conf 97537774237999999999999987543--------------------------------------------------- Q ss_pred CCCCCCCCCCCEEEEEECCCH---------HHHHHHC Q ss_conf 762300588327998507412---------5555420 Q Ver_Hs_NP_0572 229 ADTLTHNLGIPVLVVCTKCDA---------ISVLEKE 256 (523) Q Consensus 229 eg~Lt~NLGiPivVVctKsD~---------ie~LEKe 256 (523) .-++|++|||+|+|. .+.||+| T Consensus 109 ------~~~vPiii~~NK~Dl~~a~~~~~i~~~le~e 139 (209) T d1nrjb_ 109 ------ENGIDILIACNKSELFTARPPSKIKDALESE 139 (209) T ss_dssp ------TTCCCEEEEEECTTSTTCCCHHHHHHHHHHH T ss_pred ------HCCCCEEEEEECCCCCCCCCHHHHHHHHHHH T ss_conf ------1589389998554778898989999999998 No 48 >d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis} Probab=96.85 E-value=5.6e-05 Score=49.70 Aligned_columns=170 Identities=17% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCC---CCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHH Q ss_conf 588973699767899999742014---68886521456404500004325246368658624324555678700266645 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEE---YKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTL 145 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~---~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TL 145 (523) .|-++|..++|||||+.+|.+.+- ...+...+.....+...+......+..|-......................-+ T Consensus 3 ~I~iiG~~nvGKSsLin~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 82 (185) T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRV 82 (185) T ss_dssp CEEEESSTTSSHHHHHHHSEEECCEESSTTSSCCCCCEEEEECSSSCEEEEEEHHHHHHHTTCTTTTHHHHHHHHHHCCE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEEEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 16887469986899999985685213204664025788788751671110012344321001235688999886412235 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 56554010136899999999999999997327898899999999999999850455566665534456766677653447 Q Ver_Hs_NP_0572 146 VMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVV 225 (523) Q Consensus 146 VvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~l 225 (523) +++++|.+.++.+...-..+...-......+. T Consensus 83 i~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------ 114 (185) T d1lnza2 83 IVHVIDMSGLEGRDPYDDYLTINQELSEYNLR------------------------------------------------ 114 (185) T ss_dssp EEEEEESSCSSCCCHHHHHHHHHHHHHHSCSS------------------------------------------------ T ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH------------------------------------------------ T ss_conf 65553200024666178999998777777665------------------------------------------------ Q ss_pred CCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHC Q ss_conf 88876230058832799850741255554205774789999999999999971876888326636789999999998760 Q Ver_Hs_NP_0572 226 PLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLY 305 (523) Q Consensus 226 PLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrLy 305 (523) ...+|+++|++|+|. .-..+..+.+.+.+ .-+...|.||++...+++-|...|...+. T Consensus 115 ---------~~~~~~i~v~nK~Dl--------~~~~~~~~~~~~~~-----~~~~~v~~~SA~tg~Gi~el~~~i~~~l~ 172 (185) T d1lnza2 115 ---------LTERPQIIVANKMDM--------PEAAENLEAFKEKL-----TDDYPVFPISAVTREGLRELLFEVANQLE 172 (185) T ss_dssp ---------TTTSCBCBEEECTTS--------TTHHHHHHHHHHHC-----CSCCCBCCCSSCCSSTTHHHHHHHHHHHT T ss_pred ---------HHHHHHHHHHHHHCC--------CCHHHHHHHHHHHH-----CCCCCEEEEECCCCCCHHHHHHHHHHHHH T ss_conf ---------421112344311101--------11377899999984-----17996899735778888899999999734 Q ss_pred CCC Q ss_conf 655 Q Ver_Hs_NP_0572 306 GFP 308 (523) Q Consensus 306 gfp 308 (523) ..| T Consensus 173 ~~~ 175 (185) T d1lnza2 173 NTP 175 (185) T ss_dssp SCC T ss_pred CCC T ss_conf 078 No 49 >d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum} Probab=96.84 E-value=0.0017 Score=39.59 Aligned_columns=169 Identities=20% Q ss_pred CE--EEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHH--------------HCCEEEECCCCCCCCC Q ss_conf 65--8897369976789999974201468886521456404500004325--------------2463686586243245 Q Ver_Hs_NP_0572 68 KN--VLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQT--------------RCNVWILDGDLYHKGL 131 (523) Q Consensus 68 Kn--ILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~a--------------r~~vWiLdg~~~~~~L 131 (523) +| |.|+|-.++|||||+.+|.+....-..++--..-....+.+..... ....+.+-..+.|... T Consensus 4 r~p~IaiiG~~n~GKSTL~n~L~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 83 (227) T d1g7sa4 4 RSPIVSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRETLPGLFFIDTPGHEAF 83 (227) T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHHHHSCC----CCCBTTEEEEEHHHHHHHSCGGGGGCGGGGTCCEEEEECCCTTSCC T ss_pred CCCEEEEEECCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCEEEEECCCHHHHHH T ss_conf 58478998216987789999987201000035541023332331331124156640046898516706862475168999 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC Q ss_conf 55678700266645565540101368999999999999999973278988999999999999998504555666655344 Q Ver_Hs_NP_0572 132 LKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRR 211 (523) Q Consensus 132 LK~aLt~~si~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~ 211 (523) .......-...+.+++ ++|-.+.+ ....+++......+ T Consensus 84 ~~~~~~~~~~~d~~l~-vida~~g~---------------------------~~~~~~~~~~l~~~-------------- 121 (227) T d1g7sa4 84 TTLRKRGGALADLAIL-IVDINEGF---------------------------KPQTQEALNILRMY-------------- 121 (227) T ss_dssp TTSBCSSSBSCSEEEE-EEETTTCC---------------------------CHHHHHHHHHHHHT-------------- T ss_pred HHHHHHHHHHCCEEEE-EEECCCHH---------------------------HHHHHHHHHHHHHC-------------- T ss_conf 9999998875562689-97263101---------------------------36789999999962-------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC------------ Q ss_conf 56766677653447888762300588327998507412555542057747899999999999999718------------ Q Ver_Hs_NP_0572 212 NTASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYG------------ 279 (523) Q Consensus 212 ~~~~~~~~d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YG------------ 279 (523) ++|+++|++|.|.+...... ...+-...+-.+..+.....+. T Consensus 122 -------------------------~~p~iiviNKiD~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (227) T d1g7sa4 122 -------------------------RTPFVVAANKIDRIHGWRVH-EGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEE 175 (227) T ss_dssp -------------------------TCCEEEEEECGGGSTTCCCC-TTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHT T ss_pred -------------------------CCCEEEEEECCCCCCCCHHH-HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf -------------------------89389998644677864567-8899999733221356777654389999999984 Q ss_pred ----------------CEEEEECCCCHHHHHHHHHHHHHHH Q ss_conf ----------------7688832663678999999999876 Q Ver_Hs_NP_0572 280 ----------------AALIYTSVKENKNIDLVYKYIVQKL 304 (523) Q Consensus 280 ----------------AaLiYTS~ke~knl~LLykYl~HrL 304 (523) ..+|.+|.+...+++-|..+|++.. T Consensus 176 ~~~~~~~~~~~~~~~~~~iv~vSA~tg~gi~eLle~i~~~~ 216 (227) T d1g7sa4 176 GFESERFDRVTDFASQVSIIPISAITGEGIPELLTMLMGLA 216 (227) T ss_dssp TCEEEEGGGCSCTTTEEEEEECCTTTCTTHHHHHHHHHHHH T ss_pred HCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH T ss_conf 11122322234323785568830667999899999999999 No 50 >d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum)} Probab=96.18 E-value=0.0064 Score=35.76 Aligned_columns=155 Identities=19% Q ss_pred HHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH------CCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEEC Q ss_conf 9999886414454257876588973699767899999742------0146888652145640450000432524636865 Q Ver_Hs_NP_0572 50 SCILSEVSTRSRSKLPAGKNVLLLGEDGAGKTSLIRKIQG------IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILD 123 (523) Q Consensus 50 ssiL~~v~t~~~~klp~~KnILvLG~~~sGKTtLl~~Lq~------~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLd 123 (523) ...|-+.-..-+.+-++.-||+|+|..++|||||+..|.+ .....-.+...+.+..+.+ ..+-++| T Consensus 15 ~~~l~~~l~~~k~~~~~~l~I~liG~~g~GKSSliN~ilg~~~~~~s~~~~~T~~~~~~~~~~~g--------~~i~vID 86 (257) T d1h65a_ 15 QTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAG--------FTLNIID 86 (257) T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHHTSCCSCCCSSSCCCSSCEEEEEEETT--------EEEEEEE T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEECCC--------EEEEEEE T ss_conf 99999999864320337767999706898489998887467420333788851003889973187--------5899986 Q ss_pred --C-------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH Q ss_conf --8-------6243245556787002666455655401013689999999999999999732789889999999999999 Q Ver_Hs_NP_0572 124 --G-------DLYHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDF 194 (523) Q Consensus 124 --g-------~~~~~~LLK~aLt~~si~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~ 194 (523) | +......++.++....+.=.|+|+-+|.++.-.--.++-+++.-+. T Consensus 87 TPG~~~~~~~~~~~~~~i~~~l~~~~~d~iLlVi~~~~~r~~~~d~~~~~~i~~~f------------------------ 142 (257) T d1h65a_ 87 TPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSF------------------------ 142 (257) T ss_dssp CCCSEETTEECHHHHHHHHHHTTTCEECEEEEEEESSCCCCCHHHHHHHHHHHHHH------------------------ T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHC------------------------ T ss_conf 68877721340899999999861799928999984798623889999999999840------------------------ Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHH--HHHHHCCCCCHHHHHHHHHHHH Q ss_conf 98504555666655344567666776534478887623005883279985074125--5554205774789999999999 Q Ver_Hs_NP_0572 195 QEYVEPGEDFPASPQRRNTASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAI--SVLEKEHDYRDEHFDFFQSHIR 272 (523) Q Consensus 195 q~y~epg~d~~~s~~~~~~~~~~~~d~~v~lPLgeg~Lt~NLGiPivVVctKsD~i--e~LEKe~~y~dE~fDfIqq~LR 272 (523) |+..|. +++||.||+|.+ +...-| .|..+..+.++++++ T Consensus 143 ---------------------------------g~~~~~-----~~IiV~tk~D~~~~d~~~~e-~~~~~~~~~L~~~i~ 183 (257) T d1h65a_ 143 ---------------------------------GKGIWN-----KAIVALTHAQFSPPDGLPYD-EFFSKRSEALLQVVR 183 (257) T ss_dssp ---------------------------------CGGGGG-----GEEEEEECCSCCCGGGCCHH-HHHHHHHHHHHHHHH T ss_pred ---------------------------------CHHHHC-----CEEEEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHH T ss_conf ---------------------------------744435-----88999973224775678789-999877898999999 Q ss_pred HHH Q ss_conf 999 Q Ver_Hs_NP_0572 273 KFC 275 (523) Q Consensus 273 ~ic 275 (523) ..+ T Consensus 184 ~~~ 186 (257) T d1h65a_ 184 SGA 186 (257) T ss_dssp HHT T ss_pred HHH T ss_conf 985 No 51 >d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus} Probab=95.19 E-value=0.092 Score=27.91 Aligned_columns=170 Identities=18% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCC--CEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCH Q ss_conf 257876588973699767899999742014688865--214564045000043252463686586243245556787002 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRG--LEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVS 140 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~g--LeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~s 140 (523) .++.|.-+-++|.+++|||||++-|.|...+..|+- -+--.............|-=-|+-+....+..+ + T Consensus 27 ~i~~Gei~~liG~nGaGKSTll~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~l~~~~--------t 98 (242) T d1oxxk2 27 NIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNL--------T 98 (242) T ss_dssp EECTTCEEEEECSCHHHHHHHHHHHHTSSCCSEEEEEETTEEEEETTEESSCGGGSCEEEEETTSCCCTTS--------C T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCC--------C T ss_conf 56487189997278986899999985168887777898771244577433117753530443011227576--------5 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 66645565540101368999999999999999973278988999999999999998504555666655344567666776 Q Ver_Hs_NP_0572 141 LKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKD 220 (523) Q Consensus 141 i~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d 220 (523) +.+.+..-+..+..++..+.+...++.-+-+.-+.+...+.++.--+++.+.-=+. T Consensus 99 v~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~iAra------------------------ 154 (242) T d1oxxk2 99 AFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGAQQQRVALARA------------------------ 154 (242) T ss_dssp HHHHHHGGGTTSSCCHHHHHHHHHHHHHHTTCGGGTTSCGGGSCHHHHHHHHHHHH------------------------ T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHH------------------------ T ss_conf 99999988753001368899999999984063577652113586678999999998------------------------ Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC Q ss_conf 534478887623005883279985074125555420577478999999999999997187688832 Q Ver_Hs_NP_0572 221 DSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTS 286 (523) Q Consensus 221 ~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS 286 (523) .+++.|.+=--|=..+.....-.-|...|+.+.-++|.++|++| T Consensus 155 ----------------------l~~~P~iLlLDEPt~gLD~~~~~~i~~~i~~l~~~~g~tIi~vs 198 (242) T d1oxxk2 155 ----------------------LVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVS 198 (242) T ss_dssp ----------------------HTTCCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEE T ss_pred ----------------------HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE T ss_conf ----------------------62699689972750013789999999999999985398899996 No 52 >d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus)} Probab=95.00 E-value=0.036 Score=30.67 Aligned_columns=142 Identities=20% Q ss_pred EEEEEECCCCCHHHHHHHHHHC---CCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHH Q ss_conf 5889736997678999997420---1468886521456404500004325246368658624324555678700266645 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGI---EEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTL 145 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~---e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~TL 145 (523) ||.|.|..++|||||+.+|.|. ++.--+++--=+-.+...--..+.-.+.+|=+-|=-..+.-.+-.+....+.+.- T Consensus 58 ~IAIiG~snaGKSSLINAL~G~~~~e~~~a~tgv~~tT~~~~~y~~~~~~~v~LvDTPGig~~~~~~~~yL~~~~~~~~D 137 (400) T d1tq4a_ 58 NVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIGSTNFPPDTYLEKMKFYEYD 137 (400) T ss_dssp EEEEEECTTSSHHHHHHHHHTCCTTSTTSCCCCC----CCCEEEECSSCTTEEEEECCCGGGSSCCHHHHHHHTTGGGCS T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCC T ss_conf 89987248985999999884688555666668898875544134446886068987388986354489999999754872 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 56554010136899999999999999997327898899999999999999850455566665534456766677653447 Q Ver_Hs_NP_0572 146 VMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVV 225 (523) Q Consensus 146 VvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v~l 225 (523) ++|+..=.++ .+......+.+++ T Consensus 138 l~Iivss~~~-------------------------te~D~~la~~I~~-------------------------------- 160 (400) T d1tq4a_ 138 FFIIISATRF-------------------------KKNDIDIAKAISM-------------------------------- 160 (400) T ss_dssp EEEEEESSCC-------------------------CHHHHHHHHHHHH-------------------------------- T ss_pred EEEEECCCCC-------------------------CHHHHHHHHHHHH-------------------------------- T ss_conf 7998738887-------------------------5778999999997-------------------------------- Q ss_pred CCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 8887623005883279985074125555420577478999999999999997 Q Ver_Hs_NP_0572 226 PLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLR 277 (523) Q Consensus 226 PLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~ 277 (523) .|.|+++|.+|.|....-|++..=+.-...-+.|.+|..|.+ T Consensus 161 ----------~gK~fiiV~nKiD~dl~~e~~~k~~~f~~ek~Lq~Ir~~~~~ 202 (400) T d1tq4a_ 161 ----------MKKEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVN 202 (400) T ss_dssp ----------TTCEEEEEECCHHHHHHHHHTTCCTTCCHHHHHHHHHHHHHH T ss_pred ----------CCCCEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHH T ss_conf ----------389899997345533488444155557776899999999999 No 53 >d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii} Probab=93.74 E-value=0.12 Score=27.24 Aligned_columns=167 Identities=20% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHH Q ss_conf 25787658897369976789999974201468886521456404500004325246368658624324555678700266 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLK 142 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~ 142 (523) .++.|+-+-++|.+++|||||++-|.+...+..|+- |++-+|-......+-.+-.+-.+. .+...-++. T Consensus 28 ~v~~Gei~gliG~nGaGKSTLl~~l~Gl~~p~~G~I----~~~g~~i~~~~~~~r~i~~v~q~~-------~l~~~~tv~ 96 (239) T d1v43a3 28 TIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRI----YFGDRDVTYLPPKDRNISMVFQSY-------AVWPHMTVY 96 (239) T ss_dssp EECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEE----EETTEECTTSCGGGGTEEEEEC-------------CCCHH T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE----EECCCCCCCCCHHHHEEEEEEECC-------CCCCCCCHH T ss_conf 563870899971689858999998706766666778----878821222785270053232126-------767555489 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 64556554010136899999999999999997327898899999999999999850455566665534456766677653 Q Ver_Hs_NP_0572 143 DTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDS 222 (523) Q Consensus 143 ~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~ 222 (523) +-+..-...+..+|.-++....|+.-.-..-+.++..+.++.--+++.+.--+. T Consensus 97 en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGG~~Qrv~iAra-------------------------- 150 (239) T d1v43a3 97 ENIAFPLKIKKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARA-------------------------- 150 (239) T ss_dssp HHHHTTC--CCCCHHHHHHHHHHHHHHTTCGGGTTSCTTTCCSSCHHHHHHHHH-------------------------- T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH-------------------------- T ss_conf 999987763288888999999999974071246652000125303789999999-------------------------- Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC Q ss_conf 4478887623005883279985074125555420577478999999999999997187688832 Q Ver_Hs_NP_0572 223 VVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTS 286 (523) Q Consensus 223 v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS 286 (523) ..+..|.+-.-|=..+.....-..|.+.||.++-++|.+++++| T Consensus 151 --------------------L~~~p~ililDEPt~gLD~~~~~~i~~~l~~l~~~~g~tvi~vt 194 (239) T d1v43a3 151 --------------------IVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVT 194 (239) T ss_dssp --------------------HTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEE T ss_pred --------------------HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEE T ss_conf --------------------86483010133104211478899999999999996398799997 No 54 >d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis} Probab=93.45 E-value=2.1 Score=18.67 Aligned_columns=179 Identities=18% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCC--CEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHH Q ss_conf 57876588973699767899999742014688865--2145640450000432524636865862432455567870026 Q Ver_Hs_NP_0572 64 LPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRG--LEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSL 141 (523) Q Consensus 64 lp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~g--LeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si 141 (523) ++.|.-+-|+|.+++|||||++-|.|...+.+|+- -+....+-.....-..-|..+..+-.+... .+.-++ T Consensus 26 i~~Gei~~iiG~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l-------~~~ltv 98 (240) T d1g2912 26 VKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYAL-------YPHMTV 98 (240) T ss_dssp EETTCEEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEEEEEGGGTEECCGGGSSEEEECSCCCC-------CTTSCH T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEECCHHCCCCCHHHHHHHHHCCCEEEEECCCC-------CCCCCH T ss_conf 6387089997478986899999996015755771460631003665233212553660464203353-------746668 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 66455655401013689999999999999999732789889999999999999985045556666553445676667765 Q Ver_Hs_NP_0572 142 KDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDD 221 (523) Q Consensus 142 ~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~ 221 (523) .+-+....--...|+.-+++.-.=+--.-..-+..+..+.++.--+++.+.-=+. T Consensus 99 ~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~kqrv~iA~a------------------------- 153 (240) T d1g2912 99 YDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGGQRQRVALGRA------------------------- 153 (240) T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHTCGGGTTCCGGGSCHHHHHHHHHHHH------------------------- T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHH------------------------- T ss_conf 9999998987079988999999999975291567625700024357889999999------------------------- Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHH Q ss_conf 34478887623005883279985074125555420577478999999999999997187688832663678999 Q Ver_Hs_NP_0572 222 SVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDL 295 (523) Q Consensus 222 ~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~L 295 (523) ++.+.+.+---|=-.+-..+.-..|...|+.++-++|.++|++|-.-+.-..+ T Consensus 154 ---------------------l~~~P~ililDEPt~gLD~~~~~~i~~~i~~l~~~~g~tii~vsHd~~~v~~l 206 (240) T d1g2912 154 ---------------------IVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTM 206 (240) T ss_dssp ---------------------HHTCCSEEEEECTTTTSCHHHHHHHHHHHHHHHHHHTCEEEEEESCHHHHHHH T ss_pred ---------------------HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH T ss_conf ---------------------86099638974770203789999999999999986499899997487999977 No 55 >d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus} Probab=92.15 E-value=0.053 Score=29.52 Aligned_columns=33 Identities=33% Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 787658897369976789999974201468886 Q Ver_Hs_NP_0572 65 PAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 65 p~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) |-|+-|.|+|.+++|||||++.|.+...+..|+ T Consensus 4 p~Geii~lvG~sGaGKTTl~~~L~gll~p~~G~ 36 (207) T d1okkd2 4 PKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKK 36 (207) T ss_dssp CSSSEEEEECSTTSSHHHHHHHHHHHHHTTTCC T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCE T ss_conf 995389987589997899999987211778876 No 56 >d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139} Probab=91.54 E-value=0.31 Score=24.29 Aligned_columns=117 Identities=21% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC----CCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCC Q ss_conf 25787658897369976789999974201468886----52145640450000432524636865862432455567870 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR----GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDA 138 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~----gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~ 138 (523) +++.|.-+-++|.+++|||||++-|.|...+..|+ | .++.+.......|.++-.+..+. .+.+. T Consensus 28 ~i~~Gei~~liG~nGaGKSTll~~i~G~~~p~~G~I~~~g-----~~i~~~~~~~~~r~~i~~~~q~~-------~l~~~ 95 (240) T d1ji0a_ 28 KVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNG-----QDITNKPAHVINRMGIALVPEGR-------RIFPE 95 (240) T ss_dssp EEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETT-----EECTTCCHHHHHHTTEEEECSSC-------CCCTT T ss_pred EECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECC-----CCHHHHHHHHHHHHHHCCCCCCC-------CCCCC T ss_conf 5538618999737999789999999721576677478768-----46212349999875410245321-------00100 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH Q ss_conf 02666455655401013689999999999999999732789889999999999 Q Ver_Hs_NP_0572 139 VSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLI 191 (523) Q Consensus 139 ~si~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i 191 (523) -++.+.+....-....++...+....-+......-+.++-.+.++.--+++.+ T Consensus 96 ltv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LSgGqkQrv 148 (240) T d1ji0a_ 96 LTVYENLMMGAYNRKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQML 148 (240) T ss_dssp SBHHHHHHGGGTTCCCSSHHHHHHHHHHHHCHHHHTTTTSBSSSSCHHHHHHH T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH T ss_conf 12999999987404565789999999999862102345423676866789999 No 57 >d1fts_2 c.37.1.10 (285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli} Probab=90.55 E-value=0.09 Score=27.95 Aligned_columns=35 Identities=29% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) +.+.|+-|.|+|.+++|||||++.|.+.-.+..|+ T Consensus 5 ~i~~g~vv~ivG~sGsGKSTll~~L~g~~~~~~G~ 39 (211) T d1fts_2 5 EGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKS 39 (211) T ss_dssp CSCTTEEEEEECCTTSSHHHHHHHHHHHHHTTTCC T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCE T ss_conf 55887589997379997899999987330778976 No 58 >d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus} Probab=90.21 E-value=16 Score=12.69 Aligned_columns=145 Identities=15% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHH---CCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCH Q ss_conf 57876588973699767899999742---014688865214564045000043252463686586243245556787002 Q Ver_Hs_NP_0572 64 LPAGKNVLLLGEDGAGKTSLIRKIQG---IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVS 140 (523) Q Consensus 64 lp~~KnILvLG~~~sGKTtLl~~Lq~---~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~s 140 (523) +|.|.-++|.|..++|||+|...+.. .....-+.+.-..|++.-. T Consensus 33 l~~G~i~~i~G~pGsGKT~l~l~~a~~~~~~~~~~~~~~~vlyi~~e~-------------------------------- 80 (254) T d1pzna2 33 IETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTEN-------------------------------- 80 (254) T ss_dssp EESSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSS-------------------------------- T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC-------------------------------- T ss_conf 546748999648875289999999999972021234573589972555-------------------------------- Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC Q ss_conf 6664556554010136899999999999-99999732----789889999999999999985045556666553445676 Q Ver_Hs_NP_0572 141 LKDTLVMLVVDMSKPWTALDSLQKWASV-VREHVDKL----KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 215 (523) Q Consensus 141 i~~TLVvIvlDmS~PWt~m~qL~~Wi~v-Lrehi~~L----~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~ 215 (523) +-+...+.++.....+ +.+.++.+ ....++.............. T Consensus 81 ------------~~~~~rl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 129 (254) T d1pzna2 81 ------------TFRPERIREIAQNRGLDPDEVLKHIYVARAFNSNHQMLLVQQAEDKIKE------------------- 129 (254) T ss_dssp ------------CCCHHHHHHHHHTTTCCHHHHGGGEEEEECCSHHHHHHHHHHHHHHHHH------------------- T ss_pred ------------CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH------------------- T ss_conf ------------1358999999987188989986444310124643146679999999999------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHH---HHHHHHHHHHHHHHHCCEEEEEC Q ss_conf 667765344788876230058832799850741255554205774789---99999999999997187688832 Q Ver_Hs_NP_0572 216 QEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEH---FDFFQSHIRKFCLRYGAALIYTS 286 (523) Q Consensus 216 ~~~~d~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~---fDfIqq~LR~icL~YGAaLiYTS 286 (523) .+..+-++-++||=.=+..+...+...+.-.+. +..+.+.|+++|-.|+++.+.|+ T Consensus 130 ---------------~~~~~~~~~lvVIDsi~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~la~~~~~~vv~~~ 188 (254) T d1pzna2 130 ---------------LLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLADLHRLANLYDIAVFVTN 188 (254) T ss_dssp ---------------SSSSSSCEEEEEEETSSTTHHHHCCSTTTHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE T ss_pred ---------------HHHHCCCCEEEEEECHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE T ss_conf ---------------98721793289971002210111036774358999999999999999985598799980 No 59 >d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima} Probab=89.61 E-value=0.91 Score=21.13 Aligned_columns=141 Identities=18% Q ss_pred CCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHCC------- Q ss_conf 0588327998507412555542057747899999999999999718768883266367899999999987606------- Q Ver_Hs_NP_0572 234 HNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYG------- 306 (523) Q Consensus 234 ~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS~ke~knl~LLykYl~HrLyg------- 306 (523) +.-|+|.++|.+|+|..+ ++....+++++... +.+-..+++|.+...+++.|..++..+.-- T Consensus 38 e~~~i~~IIVlNK~DL~~---------~~~~~~~~~~~~~~--~~~~~vi~iSa~~~~gi~~L~~~l~~~~~~ivG~sgV 106 (225) T d1u0la2 38 EKNELETVMVINKMDLYD---------EDDLRKVRELEEIY--SGLYPIVKTSAKTGMGIEELKEYLKGKISTMAGLSGV 106 (225) T ss_dssp HHTTCEEEEEECCGGGCC---------HHHHHHHHHHHHHH--TTTSCEEECCTTTCTTHHHHHHHHSSSEEEEECSTTS T ss_pred HHCCCCEEEEEECCCCCC---------HHHHHHHHHHHHHH--HCCCCEEEEECCCCCCHHHHHHHHHCCEEEEECCCCC T ss_conf 965897899961765588---------52799999999987--4387279985478767346776631112578716898 Q ss_pred ------------------------------------CCCCCCCCCCCCCEEEECCCCC-CHHHHHHHHCCC--CCCCCCC Q ss_conf ------------------------------------5556556411364025268888-378888765276--1137875 Q Ver_Hs_NP_0572 307 ------------------------------------FPYKIPAVVVEKDAVFIPAGWD-NDKKIGILHENF--QTLKAED 347 (523) Q Consensus 307 ------------------------------------fpf~~~a~ViDrD~IfIPaGWD-s~~KI~IL~Enf--~~~~~~d 347 (523) +++..-..++|.=-|.-+.=|| +-..|.-...-| ..|+|.+ T Consensus 107 GKSTLIN~L~~~~~~~t~~is~~~~~G~hTT~~~~l~~l~~g~~liDTPGi~~~~l~~~~~~~l~~~f~e~~~~~C~f~~ 186 (225) T d1u0la2 107 GKSSLLNAINPGLKLRVSEVSEKLQRGRHTTTTAQLLKFDFGGYVVDTPGFANLEINDIEPEELKHYFKEFGDKQCFFSD 186 (225) T ss_dssp SHHHHHHHHSTTCCCC-------------CCCSCCEEECTTSCEEESSCSSTTCCCCSSCHHHHGGGSTTSSSCCCSSTT T ss_pred CHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC T ss_conf 88899987316455532014434688732444689998679707986588755464556743567788999717897789 Q ss_pred CCCCCCCCCCCCHHHHHCEECCCCHHHHHHHHHHHHHC Q ss_conf 30236788865120200211124078899999999862 Q Ver_Hs_NP_0572 348 NFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLAK 385 (523) Q Consensus 348 ~y~~ii~kPp~rk~~~~~ei~aedeQ~FL~klq~~l~~ 385 (523) ---..-+.-.+++.+.+.+|..+-.+-|+.=++++++. T Consensus 187 C~H~~ep~Cav~~a~~~g~i~~~ry~~y~~l~~e~~~~ 224 (225) T d1u0la2 187 CNHVDEPECGVKEAVENGEIAESRYENYVKMFYELLGR 224 (225) T ss_dssp CCSSSCSSCHHHHHHHHTSSCHHHHHHHHHHHHHHHCC T ss_pred CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC T ss_conf 97247877058999872898988999999999999725 No 60 >d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis} Probab=88.62 E-value=0.17 Score=26.10 Aligned_columns=35 Identities=14% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) +++.|..+.|+|.+++|||||++-|.+...+..|. T Consensus 24 ~i~~Ge~v~iiG~nGsGKSTLl~~l~g~~~~~~G~ 58 (242) T d1mv5a_ 24 EAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGE 58 (242) T ss_dssp EECTTEEEEEECCTTSSHHHHHHHHTTSSCCSBSC T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCE T ss_conf 66388489997179997899999998863067877 No 61 >d1q12a2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli} Probab=88.27 E-value=0.77 Score=21.65 Aligned_columns=97 Identities=18% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHH Q ss_conf 25787658897369976789999974201468886521456404500004325246368658624324555678700266 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLK 142 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~ 142 (523) .++.|.-+-|+|.+++|||||++.|.|...+..|. .|++-.+-..-...+-++=.+-.++. |....--.+|+. T Consensus 22 ~i~~Gei~~iiG~nGaGKSTllk~i~G~~~p~~G~----I~~~g~~~~~~~~~~~~ig~v~Q~~~---l~~~ltv~~ni~ 94 (232) T d1q12a2 22 DIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGD----LFIGEKRMNDTPPAERGVGMVFQSYA---LYPHLSVAENMS 94 (232) T ss_dssp CCCTTCEEEEECSTTSSHHHHHHHHHSSSCCSEEE----ECSTTSCCTTSCGGGSSEEEECTTCC---CCTTSCTTTTTT T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCE----EEECCCCCCCCHHHHHCCEEEEECCC---CCCCCHHHHHHH T ss_conf 56487089997378987899999997204656886----88888232452257404344221134---463301899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 645565540101368999999999 Q Ver_Hs_NP_0572 143 DTLVMLVVDMSKPWTALDSLQKWA 166 (523) Q Consensus 143 ~TLVvIvlDmS~PWt~m~qL~~Wi 166 (523) ..+-+-..+...=......+...+ T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~ 118 (232) T d1q12a2 95 FGLKLAGAKKEVINQRVNQVAEVL 118 (232) T ss_dssp GGGSTTCCCTTTTTTHHHHHHHHT T ss_pred HHHHHCCCCHHHHHHHHHHHHHHC T ss_conf 756631578889999987788750 No 62 >d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus} Probab=88.11 E-value=0.21 Score=25.47 Aligned_columns=52 Identities=33% Q ss_pred CCCCCCCCCHHHH--HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHH Q ss_conf 8666654533679--999998864144542578765889736997678999997 Q Ver_Hs_NP_0572 36 GAAAGDDEDGQNL--WSCILSEVSTRSRSKLPAGKNVLLLGEDGAGKTSLIRKI 87 (523) Q Consensus 36 ~~~~~~~~~~~nl--WssiL~~v~t~~~~klp~~KnILvLG~~~sGKTtLl~~L 87 (523) ..-.|.|+-+|.| |-..+..-....+..+|..++||+.|-.++|||+|+..+ T Consensus 9 ~di~G~d~~k~~i~~~i~~~~~~~~~~~~~~~~~~~iLl~GppGtGKT~la~~l 62 (247) T d1ixza_ 9 KDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAV 62 (247) T ss_dssp GGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHH T ss_pred HHHCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHH T ss_conf 875171899999999999862828898658998872687668765267999999 No 63 >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori} Probab=87.02 E-value=0.2 Score=25.62 Aligned_columns=23 Identities=48% Q ss_pred CCEEEEEECCCCCHHHHHHHHHH Q ss_conf 76588973699767899999742 Q Ver_Hs_NP_0572 67 GKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 67 ~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) ++||||-|..++|||||+..|.. T Consensus 166 ~~nIlIsG~tgSGKTT~l~al~~ 188 (323) T d1g6oa_ 166 GKNVIVCGGTGSGKTTYIKSIME 188 (323) T ss_dssp TCCEEEEESTTSSHHHHHHHHGG T ss_pred CCCEEEECCCCCHHHHHHHHHHH T ss_conf 89799983899747999999997 No 64 >d1pf4a1 c.37.1.12 (A:321-564) Multidrug resistance ABC transporter MsbA, C-terminal domain {Vibrio cholerae} Probab=86.96 E-value=0.085 Score=28.12 Aligned_columns=35 Identities=29% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) .++.|+.+.|+|.+++|||||++-|.|...+.+|. T Consensus 45 ~i~~Ge~~~i~G~sGsGKSTLl~~l~G~~~p~~G~ 79 (244) T d1pf4a1 45 SIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGS 79 (244) T ss_dssp ECCTTCCCCCCCSCSSHHHHHHHHTSSSSCCSSSC T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC T ss_conf 66488489998489987899999987415845340 No 65 >d1cr1a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7} Probab=86.94 E-value=1 Score=20.73 Aligned_columns=163 Identities=14% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHH Q ss_conf 57876588973699767899999742014688865214564045000043252463686586243245556787002666 Q Ver_Hs_NP_0572 64 LPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKD 143 (523) Q Consensus 64 lp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~ 143 (523) ++.|.-++|.|..++|||+|...+..---...|...-|.-+.-..+..-....+... . T Consensus 32 ~~~G~l~~i~G~pG~GKT~l~l~la~~~a~~~g~~v~~~s~E~~~~~~~~rl~~~~~----------------------~ 89 (277) T d1cr1a_ 32 ARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEESVEETAEDLIGLHN----------------------R 89 (277) T ss_dssp BCTTCEEEEEESTTSSHHHHHHHHHHHHHHTSCCCEEEEESSSCHHHHHHHHHHHHT----------------------T T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHH----------------------C T ss_conf 647827999659870079999999999998379942999832565899999998762----------------------4 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 45565540101368999999999999999973278988999999999999998504555666655344567666776534 Q Ver_Hs_NP_0572 144 TLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSV 223 (523) Q Consensus 144 TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v 223 (523) .-.--.-+....+.-++++..|+..+. ....+.+.........+.+....++.++ T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------------ 144 (277) T d1cr1a_ 90 VRLRQSDSLKREIIENGKFDQWFDELF-GNDTFHLYDSFAEAETDRLLAKLAYMRS------------------------ 144 (277) T ss_dssp SCGGGCHHHHHHHHHHTHHHHHHHHHH-SSSCEEEECCCCSCCHHHHHHHHHHHHH------------------------ T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEECCCCCCCHHHHHHHHHHHHH------------------------ T ss_conf 652322211000123889999999975-0155424236456788999999999998------------------------ Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC Q ss_conf 478887623005883279985074125555420577478999999999999997187688832 Q Ver_Hs_NP_0572 224 VVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTS 286 (523) Q Consensus 224 ~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS 286 (523) ..++.++||=.=........+...+ ++.+.+...||.+|-.||.+.|.++ T Consensus 145 -----------~~~~~lvvID~l~~l~~~~~~~~~~--~~i~~~~~~L~~lA~~~~v~vi~v~ 194 (277) T d1cr1a_ 145 -----------GLGCDVIILDHISIVVSASGESDER--KMIDNLMTKLKGFAKSTGVVLVVIC 194 (277) T ss_dssp -----------TSCCSEEEEEEEEC----------C--HHHHHHHHHHHHHHHHHCCEEEEEE T ss_pred -----------HCCCCEEEEEEHHHHHCCCCCCCHH--HHHHHHHHHHHHHHHHCCCEEEEEC T ss_conf -----------3498689986011222256655268--9999999999999986598799951 No 66 >d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=86.46 E-value=6.4 Score=15.37 Aligned_columns=145 Identities=21% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCC---CCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCH Q ss_conf 57876588973699767899999742014688---865214564045000043252463686586243245556787002 Q Ver_Hs_NP_0572 64 LPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKK---GRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVS 140 (523) Q Consensus 64 lp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kK---g~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~s 140 (523) +|.|.-++|.|..++|||+|...+.-.-.... +.+..-.|++ ....+.+.. T Consensus 31 i~~G~lt~I~G~~GsGKT~l~l~l~~~~~~~~~~~~~~~~vlyi~--------------------------~E~~~~~~r 84 (251) T d1szpa2 31 VETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYID--------------------------TEGTFRPVR 84 (251) T ss_dssp EESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEE--------------------------SSSCCCGGG T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEE--------------------------CCCCCCHHH T ss_conf 646748999658887788999999999984210156785799982--------------------------457302799 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 66645565540101368999999999999999973278988999999999999998504555666655344567666776 Q Ver_Hs_NP_0572 141 LKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKD 220 (523) Q Consensus 141 i~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d 220 (523) +...+-.+-.|... ++......-..+.++..+..+.+....+++ T Consensus 85 l~~~~~~~~~~~~~-------------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 128 (251) T d1szpa2 85 LVSIAQRFGLDPDD-------------ALNNVAYARAYNADHQLRLLDAAAQMMSES----------------------- 128 (251) T ss_dssp GHHHHHHTCCCHHH-------------HGGGEEEEECCSTTTHHHHHHHTHHHHHHS----------------------- T ss_pred HHHHHHHCCCCHHH-------------HHHHCCCCCCCCHHHHHHHHHHHHHHHHHC----------------------- T ss_conf 99999870776356-------------652101123165356999999999999727----------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHH---HHHHHHHHHHHHHHHCCEEEEEC Q ss_conf 5344788876230058832799850741255554205774789---99999999999997187688832 Q Ver_Hs_NP_0572 221 DSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEH---FDFFQSHIRKFCLRYGAALIYTS 286 (523) Q Consensus 221 ~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~---fDfIqq~LR~icL~YGAaLiYTS 286 (523) ++.++||=.=+..+.......+...+. +.-+.+.||+++-+|+.+.+.|+ T Consensus 129 ----------------~~~liVIDsi~~l~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~v~vvvtn 181 (251) T d1szpa2 129 ----------------RFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTN 181 (251) T ss_dssp ----------------CEEEEEEETGGGGGSCC-----CTHHHHHHHHHHHHHHHHHHHHHCCCEEEEE T ss_pred ----------------CCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC T ss_conf ----------------97289984112331100367776578999999999999999986498799982 No 67 >d1s4qa_ c.37.1.1 (A:) Guanylate kinase {Mycobacterium tuberculosis} Probab=86.43 E-value=0.2 Score=25.56 Aligned_columns=31 Identities=23% Q ss_pred CCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 7658897369976789999974201468886 Q Ver_Hs_NP_0572 67 GKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 67 ~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) |+-|.|+|.+++|||||++.|.+..+...|. T Consensus 2 G~ii~iiGpsGaGKsTL~~~l~g~~~~~~G~ 32 (183) T d1s4qa_ 2 GRVVVLSGPSAVGKSTVVRCLRERIPNLHFS 32 (183) T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHSTTCEEC T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCCEE T ss_conf 4689997689987889999998526887137 No 68 >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major} Probab=86.06 E-value=0.27 Score=24.77 Aligned_columns=25 Identities=44% Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHH Q ss_conf 7876588973699767899999742 Q Ver_Hs_NP_0572 65 PAGKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 65 p~~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) |-|+||+|.|-.++||||+-+.|.. T Consensus 3 ~kg~~I~i~G~~GsGKTTia~~La~ 27 (174) T d1y63a_ 3 PKGINILITGTPGTGKTSMAEMIAA 27 (174) T ss_dssp CSSCEEEEECSTTSSHHHHHHHHHH T ss_pred CCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 8875588877999986789999999 No 69 >d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=85.85 E-value=0.73 Score=21.77 Aligned_columns=128 Identities=16% Q ss_pred EEEEEECCCCCHHHHHHHHHHCCCCCCCCC-CEEEEEECCCHHCC----------------------------HHHHCCE Q ss_conf 588973699767899999742014688865-21456404500004----------------------------3252463 Q Ver_Hs_NP_0572 69 NVLLLGEDGAGKTSLIRKIQGIEEYKKGRG-LEYLYLNVHDEDRD----------------------------DQTRCNV 119 (523) Q Consensus 69 nILvLG~~~sGKTtLl~~Lq~~e~~kKg~g-LeY~Yl~V~DeDrd----------------------------d~ar~~v 119 (523) ||-|+|.-++|||||+.+|......-.... -+..|.|.+.+.++ +.....+ T Consensus 19 NI~IiGHvdhGKTTL~d~Ll~~~g~i~~~~~g~~r~~D~~~dE~eRgITikss~isl~~~~~~~~~~~~~~~~~~~~~lI 98 (341) T d1n0ua2 19 NMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLI 98 (341) T ss_dssp EEEEECCGGGTHHHHHHHHHHHHBCCBC------------------CCCBCCCEEEEEEECCHHHHHHCSSCCCSSEEEE T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEE T ss_conf 58999425988789999999982653123343100025634577628606545899974476432100000124676069 Q ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHCCCCHHHHHHHHH Q ss_conf 68658624324555678700266645565540101368999999999999-----------9999732789889999999 Q Ver_Hs_NP_0572 120 WILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVV-----------REHVDKLKIPPEEMKQMEQ 188 (523) Q Consensus 120 WiLdg~~~~~~LLK~aLt~~si~~TLVvIvlDmS~PWt~m~qL~~Wi~vL-----------rehi~~L~i~~ee~ke~~e 188 (523) -++|-+ +|.....-...+-.+.+..|+++---.-+-.--+++-+++... .-.+..|+.+++|+-+..+ T Consensus 99 nlIDTP-GH~dF~~ev~~alr~~DgaiLVVDa~eGv~~qT~~vl~~a~~~~ip~iivINKiDrli~El~l~p~e~y~~l~ 177 (341) T d1n0ua2 99 NLIDSP-GHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFA 177 (341) T ss_dssp EEECCC-CCCSSCHHHHHHHHTCSEEEEEEETTTBSCHHHHHHHHHHHHTTCEEEEEEECHHHHHHTSCCCHHHHHHHHH T ss_pred EEEECC-CHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCHHHHHHHHH T ss_conf 997478-6567899999998860616898977889860369999999974797899986410354414799899999999 Q ss_pred HHHHHHHHH Q ss_conf 999999985 Q Ver_Hs_NP_0572 189 KLIRDFQEY 197 (523) Q Consensus 189 ~~i~~~q~y 197 (523) +++.+.... T Consensus 178 ~iie~vN~~ 186 (341) T d1n0ua2 178 RTVESVNVI 186 (341) T ss_dssp HHHHHHHHH T ss_pred HHHHHHHHH T ss_conf 999999999 No 70 >d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens)} Probab=85.83 E-value=12 Score=13.53 Aligned_columns=145 Identities=19% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHH---CCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCH Q ss_conf 57876588973699767899999742---014688865214564045000043252463686586243245556787002 Q Ver_Hs_NP_0572 64 LPAGKNVLLLGEDGAGKTSLIRKIQG---IEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVS 140 (523) Q Consensus 64 lp~~KnILvLG~~~sGKTtLl~~Lq~---~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~s 140 (523) +|.|+-++|.|..++|||+|..+|.- .....-+.+-...|++- ...++.+. T Consensus 20 l~~G~it~I~G~pGsGKT~l~lqla~~~~~~~~~~~~~~~vlyi~~--------------------------E~~~~~~r 73 (242) T d1n0wa_ 20 IETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDT--------------------------EGTFRPER 73 (242) T ss_dssp EETTSEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEES--------------------------SSCCCHHH T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC--------------------------CCCHHHHH T ss_conf 4257389997489865889999999999721000112734899854--------------------------66235899 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 66645565540101368999999999999999973278988999999999999998504555666655344567666776 Q Ver_Hs_NP_0572 141 LKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKD 220 (523) Q Consensus 141 i~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d 220 (523) +...+--.-.|+.+ ++......--.+.++..+..+++.....++ T Consensus 74 l~~~~~~~~~~~~~-------------~l~~i~~~~~~~~~~~~~~l~~l~~~i~~~----------------------- 117 (242) T d1n0wa_ 74 LLAVAERYGLSGSD-------------VLDNVAYARAFNTDHQTQLLYQASAMMVES----------------------- 117 (242) T ss_dssp HHHHHHHTTCCHHH-------------HHHTEEEEECCSHHHHHHHHHHHHHHHHHS----------------------- T ss_pred HHHHHHHCCCCHHH-------------HHHHHHHCCCCCHHHHHHHHHHHHHHHHHC----------------------- T ss_conf 99999864988889-------------864432024588355899999999999852----------------------- Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHH---HHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC Q ss_conf 534478887623005883279985074125555---420577478999999999999997187688832 Q Ver_Hs_NP_0572 221 DSVVVPLGADTLTHNLGIPVLVVCTKCDAISVL---EKEHDYRDEHFDFFQSHIRKFCLRYGAALIYTS 286 (523) Q Consensus 221 ~~v~lPLgeg~Lt~NLGiPivVVctKsD~ie~L---EKe~~y~dE~fDfIqq~LR~icL~YGAaLiYTS 286 (523) ++-++||=.=+-.+... +++...+...+.-+.+.|+.++-.|+.+.+.|+ T Consensus 118 ----------------~~~lvVIDsi~~~~~~~~~~~~~~~~r~~~l~~~~~~L~~lA~~~~~~Vvvtn 170 (242) T d1n0wa_ 118 ----------------RYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITN 170 (242) T ss_dssp ----------------CEEEEEEETSSGGGC-------CHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC T ss_pred ----------------CCCEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC T ss_conf ----------------89658874100121221157775579999999999999999986598699982 No 71 >d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus} Probab=85.80 E-value=0.18 Score=25.99 Aligned_columns=35 Identities=31% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) .++.|.-+-|+|.+++|||||++.+.|.-.+..|+ T Consensus 23 ~i~~Gei~~i~G~nGaGKSTLl~~i~G~~~p~~G~ 57 (200) T d1sgwa_ 23 TIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGE 57 (200) T ss_dssp EEETTCCEEEECCTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE T ss_conf 76488189997279997799999973278867556 No 72 >d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens)} Probab=85.79 E-value=0.23 Score=25.26 Aligned_columns=35 Identities=26% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) +++.|+-+-|+|.+++|||||++-+.|...+-.|. T Consensus 36 ~i~~Ge~~~iiG~nGsGKSTLl~~i~Gl~~p~~G~ 70 (251) T d1jj7a_ 36 TLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQ 70 (251) T ss_dssp EECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCE T ss_conf 65388489997489987899999986203899988 No 73 >d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima} Probab=85.59 E-value=0.23 Score=25.16 Aligned_columns=35 Identities=31% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) .++.|.-+-++|.+++|||||++-|.|.-.+-.|+ T Consensus 24 ~v~~Gei~~llG~nGsGKSTLl~~l~G~~~p~~G~ 58 (238) T d1vpla_ 24 EIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGI 58 (238) T ss_dssp EECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCE T ss_conf 56286189997279987899999986036887776 No 74 >d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus)} Probab=85.47 E-value=0.27 Score=24.76 Aligned_columns=35 Identities=34% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) .++.|.-+-|+|.+++|||||++-|.|...+.+|. T Consensus 58 ~i~~Ge~v~IiG~nGsGKSTLl~~l~Gl~~~~~g~ 92 (281) T d1r0wa_ 58 NIEKGEMLAITGSTGSGKTSLLMLILGELEASEGI 92 (281) T ss_dssp EECTTCEEEEEESTTSSHHHHHHHHHTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCC T ss_conf 65388589997389997899999984014744220 No 75 >d1mt0a_ c.37.1.12 (A:) Haemolysin B ATP-binding protein {Escherichia coli} Probab=84.36 E-value=0.22 Score=25.37 Aligned_columns=35 Identities=26% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) .++.|.-+-|+|.+++|||||++-|.|...+..|+ T Consensus 25 ~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~ 59 (241) T d1mt0a_ 25 SIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQ 59 (241) T ss_dssp EECTTCEEEEECSTTSSGGGHHHHHTTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCE T ss_conf 65488589997389986899999997311477776 No 76 >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum} Probab=83.56 E-value=1.3 Score=20.08 Aligned_columns=60 Identities=27% Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEE Q ss_conf 654533679999998864144542578765889736997678999997420146888652145640 Q Ver_Hs_NP_0572 40 GDDEDGQNLWSCILSEVSTRSRSKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLN 105 (523) Q Consensus 40 ~~~~~~~nlWssiL~~v~t~~~~klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~ 105 (523) +-|++.+-|=+.+-.-+....+ .|. +|||.|..++|||+++..+. .+.++.....|.|.| T Consensus 20 ~re~~~~~l~~~l~~~~~~~~~--~~~--~ili~GppGtGKT~~~r~la--~~l~~~~~~~~~~~~ 79 (276) T d1fnna2 20 HREQQLQQLDILLGNWLRNPGH--HYP--RATLLGRPGTGKTVTLRKLW--ELYKDKTTARFVYIN 79 (276) T ss_dssp TCHHHHHHHHHHHHHHHHSTTS--SCC--EEEEECCTTSSHHHHHHHHH--HHHTTSCCCEEEEEE T ss_pred CHHHHHHHHHHHHHHHHHCCCC--CCC--EEEEECCCCCCHHHHHHHHH--HHHHHHCCCCEEECC T ss_conf 2589999999999999743576--667--37887899983899999999--985520588333037 No 77 >d1t4ga2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae} Probab=83.50 E-value=17 Score=12.47 Aligned_columns=159 Identities=13% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCHHHH Q ss_conf 57876588973699767899999742014688865214564045000043252463686586243245556787002666 Q Ver_Hs_NP_0572 64 LPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKD 143 (523) Q Consensus 64 lp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~LLK~aLt~~si~~ 143 (523) +|.|.-++|.|..++|||+|...+.-.-..++. .+.-.....+.......+.-++.+ ..+....+.. T Consensus 31 l~~G~i~~i~G~~G~GKT~l~l~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~vlyi~~e--------~~~~~~rl~~ 97 (258) T d1t4ga2 31 LESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEF-----LFYDEEAVSKGEVAQPKAVYIDTE--------GTFRPERIMQ 97 (258) T ss_dssp EEBTSEEEEEESTTSSHHHHHHHHHHHTTCGGG-----EECCTTTSCGGGGSSEEEEEEESS--------SCCCHHHHHH T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCC-----CEEEEHHHHHHHHCCCEEEEEECC--------CCCCHHHHHH T ss_conf 335738999628987288999999999862677-----413201111112200348898527--------8748899999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC Q ss_conf 45565540101368999999999999999973278988999999999999998504555666655344567666776534 Q Ver_Hs_NP_0572 144 TLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSV 223 (523) Q Consensus 144 TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi~~L~i~~ee~ke~~e~~i~~~q~y~epg~d~~~s~~~~~~~~~~~~d~~v 223 (523) ..--+-.| ....++.+.+............+....++..... T Consensus 98 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 139 (258) T d1t4ga2 98 MAEHAGID-----------------GQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGN--------------------- 139 (258) T ss_dssp HHHHHTSC-----------------HHHHHHTEEEEECSSHHHHHHHHHTHHHHHHTTC--------------------- T ss_pred HHHHCCCC-----------------HHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCC--------------------- T ss_conf 99871888-----------------6687624002102786689999999999997228--------------------- Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCHHH---HHHHHHHHHHHHHHHCCEEEEEC Q ss_conf 4788876230058832799850741255554205774789---99999999999997187688832 Q Ver_Hs_NP_0572 224 VVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEH---FDFFQSHIRKFCLRYGAALIYTS 286 (523) Q Consensus 224 ~lPLgeg~Lt~NLGiPivVVctKsD~ie~LEKe~~y~dE~---fDfIqq~LR~icL~YGAaLiYTS 286 (523) ++.++||=.=+..+....-..+-..+. +.-+.+.|++++.+|+.+.|.|+ T Consensus 140 -------------~~~lVVIDsi~~l~~~~~~~~~~~~~~~~~l~~~~~~L~~la~~~~~~vi~~n 192 (258) T d1t4ga2 140 -------------NIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTN 192 (258) T ss_dssp -------------EEEEEEEECSSHHHHHHSCSTTSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE T ss_pred -------------CCEEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE T ss_conf -------------95189981101210010047886468999999999999999985299799981 No 78 >d3adk__ c.37.1.1 (-) Adenylate kinase {Pig (Sus scrofa)} Probab=82.91 E-value=0.32 Score=24.18 Aligned_columns=27 Identities=33% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHH Q ss_conf 257876588973699767899999742 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) |+..+|-|+|.|-.++||||+-..|.+ T Consensus 4 ~~~~~~iI~i~G~~GsGKsT~a~~La~ 30 (194) T d3adk__ 4 KLKKSKIIFVVGGPGSGKGTQCEKIVQ 30 (194) T ss_dssp HHHTSCEEEEEECTTSSHHHHHHHHHH T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 002587789885899986889999999 No 79 >d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium} Probab=82.74 E-value=0.37 Score=23.83 Aligned_columns=35 Identities=29% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) .++.|.-+-|+|.+++|||||++.+.+...+.+|+ T Consensus 24 ~v~~Gei~giiG~nGsGKSTLlk~i~G~~~p~~G~ 58 (258) T d1b0ua_ 24 QARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGA 58 (258) T ss_dssp EECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCC T ss_conf 56387079997378987899999997404756785 No 80 >d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii} Probab=82.20 E-value=0.4 Score=23.60 Aligned_columns=35 Identities=23% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) .++.|.-+-|+|.+++|||||++-|.+..++-.|+ T Consensus 27 ~i~~Ge~~~iiG~sGsGKSTL~~~l~gl~~p~~G~ 61 (230) T d1l2ta_ 27 NIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGE 61 (230) T ss_dssp EECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCE T ss_conf 66487289997269987899999986205766875 No 81 >d1ak2_1 c.37.1.1 (14-146,177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2} Probab=81.02 E-value=0.56 Score=22.57 Aligned_columns=25 Identities=40% Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHH Q ss_conf 7876588973699767899999742 Q Ver_Hs_NP_0572 65 PAGKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 65 p~~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) |-|..|+|.|-.++||||+...|++ T Consensus 1 ~kg~~Ivl~G~~GsGKsT~~~~La~ 25 (190) T d1ak2_1 1 PKGVRAVLLGPPGAGKGTQAPKLAK 25 (190) T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHH T ss_pred CCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 9961788875899987889999999 No 82 >d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii} Probab=80.83 E-value=0.42 Score=23.45 Aligned_columns=35 Identities=34% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) +++.|.-+-++|.+++|||||+.-|.|...+..|+ T Consensus 26 ~i~~Gei~~liG~nGaGKSTL~~~i~G~~~p~~G~ 60 (254) T d1g6ha_ 26 SVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGR 60 (254) T ss_dssp EEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCE T ss_conf 56387189997378987899999970787777677 No 83 >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni} Probab=79.17 E-value=0.53 Score=22.72 Aligned_columns=22 Identities=36% Q ss_pred CEEEEEECCCCCHHHHHHHHHH Q ss_conf 6588973699767899999742 Q Ver_Hs_NP_0572 68 KNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 68 KnILvLG~~~sGKTtLl~~Lq~ 89 (523) |||++.|-.++||||+-..|++ T Consensus 1 k~I~l~G~~GsGKtTia~~La~ 22 (161) T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAK 22 (161) T ss_dssp CCEEEECCTTSCHHHHHHHHHH T ss_pred CEEEEECCCCCCHHHHHHHHHH T ss_conf 9488874899977789999999 No 84 >d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae} Probab=78.63 E-value=0.51 Score=22.86 Aligned_columns=23 Identities=35% Q ss_pred CCEEEEEECCCCCHHHHHHHHHH Q ss_conf 76588973699767899999742 Q Ver_Hs_NP_0572 67 GKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 67 ~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) +|-|.|.|-.++|||||+..|.+ T Consensus 7 ~~~I~i~G~~g~GKSTL~n~L~~ 29 (192) T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAA 29 (192) T ss_dssp CEEEEEECCTTSHHHHHHHHHHH T ss_pred CCEEEEECCCCCCHHHHHHHHHH T ss_conf 40788873899878899999998 No 85 >d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli} Probab=78.16 E-value=0.55 Score=22.63 Aligned_columns=34 Identities=35% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCC Q ss_conf 25787658897369976789999974201468886 Q Ver_Hs_NP_0572 63 KLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGR 97 (523) Q Consensus 63 klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~ 97 (523) .++.|+-+-|+|.+++|||||++-|.+... .+|. T Consensus 21 ~i~~Gei~~iiG~nGaGKSTLl~~l~Gl~~-~~G~ 54 (231) T d1l7vc_ 21 EVRAGEILHLVGPNGAGKSTLLARMAGMTS-GKGS 54 (231) T ss_dssp EEETTCEEECBCCTTSSHHHHHHHHHTSCC-CSSE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCC-CCCE T ss_conf 462871899985899868999999846668-9877 No 86 >d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=77.82 E-value=0.82 Score=21.44 Aligned_columns=27 Identities=19% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHC Q ss_conf 578765889736997678999997420 Q Ver_Hs_NP_0572 64 LPAGKNVLLLGEDGAGKTSLIRKIQGI 90 (523) Q Consensus 64 lp~~KnILvLG~~~sGKTtLl~~Lq~~ 90 (523) .|+++=.+|+|.+++|||||+..|.+. T Consensus 22 ~~~~~~~~iiG~NGsGKStLL~al~~~ 48 (427) T d1w1wa_ 22 FGESNFTSIIGPNGSGKSNMMDAISFV 48 (427) T ss_dssp CTTCSEEEEECSTTSSHHHHHHHHHHH T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHH T ss_conf 688875999858899789999999986 No 87 >d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis} Probab=77.74 E-value=2.2 Score=18.50 Aligned_columns=47 Identities=17% Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCC Q ss_conf 6799999988641445425787658897369976789999974201468 Q Ver_Hs_NP_0572 46 QNLWSCILSEVSTRSRSKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEYK 94 (523) Q Consensus 46 ~nlWssiL~~v~t~~~~klp~~KnILvLG~~~sGKTtLl~~Lq~~e~~k 94 (523) +.+....+.......- .+.+-.|.|+|-.++||||||.+|.+....+ T Consensus 93 ~~~l~~~~~~~~~~~~--~~~~~~v~vvG~PNVGKSSliN~L~~~~~~~ 139 (273) T d1puja_ 93 KEILQEKFDRMRAKGV--KPRAIRALIIGIPNVGKSTLINRLAKKNIAK 139 (273) T ss_dssp HHHHHHHHHHHHHTTC--CCCCEEEEEEESTTSSHHHHHHHHHTSCCC- T ss_pred HHHHHHHHHHHHHCCC--CCCCEEEEEEECCCCCHHHHHHHHHCCCCEE T ss_conf 4322234444421144--3441689998558773578887764264245 No 88 >d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli} Probab=76.93 E-value=5.8 Score=15.70 Aligned_columns=104 Identities=13% Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHCCHHHHCCEEEECCCCCCCC------CCCCCCCCC Q ss_conf 87658897369976789999974201468886521456404500004325246368658624324------555678700 Q Ver_Hs_NP_0572 66 AGKNVLLLGEDGAGKTSLIRKIQGIEEYKKGRGLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKG------LLKFSLDAV 139 (523) Q Consensus 66 ~~KnILvLG~~~sGKTtLl~~Lq~~e~~kKg~gLeY~Yl~V~DeDrdd~ar~~vWiLdg~~~~~~------LLK~aLt~~ 139 (523) +.++++|+|..++|||+++..|-.-.-....+ ..++|.+.+......+..+++++....... .+......+ T Consensus 49 ~~~H~lIiG~TGsGKT~~l~~li~~~~~~g~~---viviDpkGe~~~~~~~~~~~~~~p~~~~s~~~NPl~~~~~~~~~~ 125 (433) T d1e9ra_ 49 EPRHLLVNGATGTGKSVLLRELAYTGLLRGDR---MVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQ 125 (433) T ss_dssp GGGCEEEEECTTSSHHHHHHHHHHHHHHTTCE---EEEEEETTHHHHHHCCTTCEEECTTBTTCCCCCGGGGCCSTTHHH T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC---EEEEECCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCHHHHH T ss_conf 78507998179975899999999999965897---899817736899625783189845778886436143147667999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 2666455655401013689999999999999999 Q Ver_Hs_NP_0572 140 SLKDTLVMLVVDMSKPWTALDSLQKWASVVREHV 173 (523) Q Consensus 140 si~~TLVvIvlDmS~PWt~m~qL~~Wi~vLrehi 173 (523) .+.+.++-...+-..| .|...-+.++..+-.++ T Consensus 126 ~la~~li~~~~~~~~~-~~~~~a~~ll~~~~~~l 158 (433) T d1e9ra_ 126 RYALSVVPRGKTDEAE-EWASYGRLLLRETAKKL 158 (433) T ss_dssp HHHHHHSCBCSSHHHH-HHHHHHHHHHHHHHHHH T ss_pred HHHHHHCCCCCCCCHH-HHHHHHHHHHHHHHHHH T ss_conf 9999860356786315-78899999999999999 No 89 >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus)} Probab=76.14 E-value=1.3 Score=20.05 Aligned_columns=54 Identities=26% Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCC---CCCCCEEEEEECCCCCHHHHHHHHHH Q ss_conf 8666654533679999998864144542---57876588973699767899999742 Q Ver_Hs_NP_0572 36 GAAAGDDEDGQNLWSCILSEVSTRSRSK---LPAGKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 36 ~~~~~~~~~~~nlWssiL~~v~t~~~~k---lp~~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) ..-.|-|+.+|.|=..|..-+....+-. ++..+.||+.|..++|||+|+..+.+ T Consensus 7 ~di~G~~~~k~~l~e~i~~~~~~~~~~~~~g~~~~~giLL~GppGtGKT~la~aia~ 63 (265) T d1r7ra3 7 EDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 63 (265) T ss_dssp SSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHH T ss_pred HHHHCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 876064999999999999885182789747799876178878889768999999998 No 90 >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli} Probab=75.25 E-value=1.8 Score=19.09 Aligned_columns=50 Identities=36% Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCC---CCCCCEEEEEECCCCCHHHHHHHHHH Q ss_conf 6654533679999998864144542---57876588973699767899999742 Q Ver_Hs_NP_0572 39 AGDDEDGQNLWSCILSEVSTRSRSK---LPAGKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 39 ~~~~~~~~nlWssiL~~v~t~~~~k---lp~~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) .|-|+.++.| ..++.-+....+-+ +|--|.||+.|..++|||+|++.|.. T Consensus 15 ~G~~~~k~~l-~~~i~~~~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~ 67 (256) T d1lv7a_ 15 AGCDEAKEEV-AELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAG 67 (256) T ss_dssp CSCHHHHHHT-HHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHH T ss_pred CCHHHHHHHH-HHHHHHHHCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHH T ss_conf 0648999999-9999986282889866899887068767876436899999987 No 91 >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes} Probab=75.15 E-value=1.9 Score=19.03 Aligned_columns=47 Identities=30% Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH Q ss_conf 453367999999886414454257876588973699767899999742 Q Ver_Hs_NP_0572 42 DEDGQNLWSCILSEVSTRSRSKLPAGKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 42 ~~~~~nlWssiL~~v~t~~~~klp~~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) |+|=|+.-..++.+...++..-=.. |.||+.|-.++|||+|.+.+.+ T Consensus 8 ~~e~~~~l~~~~~~~~~~~~~~~~P-kgilL~GpPGtGKT~lAkaia~ 54 (273) T d1gvnb_ 8 DKQFENRLNDNLEELIQGKKAVESP-TAFLLGGQPGSGKTSLRSAIFE 54 (273) T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSSC-EEEEEECCTTSCTHHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCC-EEEEEECCCCCCHHHHHHHHHH T ss_conf 7999999999999886077753177-7889736999748999999999 No 92 >d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae} Probab=75.06 E-value=1.1 Score=20.67 Aligned_columns=30 Identities=30% Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHCCCCC Q ss_conf 787658897369976789999974201468 Q Ver_Hs_NP_0572 65 PAGKNVLLLGEDGAGKTSLIRKIQGIEEYK 94 (523) Q Consensus 65 p~~KnILvLG~~~sGKTtLl~~Lq~~e~~k 94 (523) |..||||++|-.++|||-|-++|.+.-..+ T Consensus 47 ~~pkniLl~GPtGtGKT~LAkalA~~l~vP 76 (443) T d1g41a_ 47 VTPKNILMIGPTGVGKTEIARRLAKLANAP 76 (443) T ss_dssp CCCCCEEEECCTTSSHHHHHHHHHHHTTCC T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCC T ss_conf 255215886788985789999999973898 No 93 >d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus)} Probab=74.77 E-value=1.3 Score=20.03 Aligned_columns=35 Identities=34% Q ss_pred HHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH Q ss_conf 99886414454257876588973699767899999742 Q Ver_Hs_NP_0572 52 ILSEVSTRSRSKLPAGKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 52 iL~~v~t~~~~klp~~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) ....+.+..| .|. .+||+.|..++|||+|...+.. T Consensus 28 ~~~~~~~~~~--~p~-~siLl~GppGtGKT~lakalA~ 62 (246) T d1d2na_ 28 LVQQTKNSDR--TPL-VSVLLEGPPHSGKTALAAKIAE 62 (246) T ss_dssp HHHHHHHCSS--CSE-EEEEEECSTTSSHHHHHHHHHH T ss_pred HHHHHHCCCC--CCC-CEEEEECCCCCHHHHHHHHHHH T ss_conf 9998731357--886-5588874897548999999999 No 94 >d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli} Probab=73.73 E-value=2.2 Score=18.47 Aligned_columns=47 Identities=26% Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH Q ss_conf 688866665453367999999886414454257876588973699767899999742 Q Ver_Hs_NP_0572 33 GNGGAAAGDDEDGQNLWSCILSEVSTRSRSKLPAGKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 33 g~~~~~~~~~~~~~nlWssiL~~v~t~~~~klp~~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) |.=.+.-|-|++.+.+=..+. -+...|+|+.|..++|||+|...|.. T Consensus 19 ~~ld~~vG~~~~~~~l~~~L~----------~~~~~n~ll~GppGtGKT~la~~la~ 65 (195) T d1jbka_ 19 GKLDPVIGRDEEIRRTIQVLQ----------RRTKNNPVLIGEPGVGKTAIVEGLAQ 65 (195) T ss_dssp TCSCCCCSCHHHHHHHHHHHT----------SSSSCEEEEECCTTSCHHHHHHHHHH T ss_pred CCCCCCCCCHHHHHHHHHHHH----------CCCCCCEEEECCCCCCHHHHHHHHHH T ss_conf 788844488889999999985----------48888757873887528999999987 No 95 >d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli} Probab=73.70 E-value=1.2 Score=20.37 Aligned_columns=23 Identities=30% Q ss_pred CCEEEEEECCCCCHHHHHHHHHH Q ss_conf 76588973699767899999742 Q Ver_Hs_NP_0572 67 GKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 67 ~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) ||=|.|.|..++||||+...|.+ T Consensus 2 ~k~I~i~G~~GsGKsT~~~~L~~ 24 (210) T d4tmka_ 2 SKYIVIEGLEGAGKTTARNVVVE 24 (210) T ss_dssp CCEEEEEECTTSCHHHHHHHHHH T ss_pred CEEEEEECCCCCCHHHHHHHHHH T ss_conf 60789876899987899999999 No 96 >d1gky__ c.37.1.1 (-) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae)} Probab=73.63 E-value=1.2 Score=20.25 Aligned_columns=62 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHHH---------------CCCCCCCCCCEEEEEECC--CHHCCHHHHCCEEEECCCCCCCCC Q ss_conf 88973699767899999742---------------014688865214564045--000043252463686586243245 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQG---------------IEEYKKGRGLEYLYLNVH--DEDRDDQTRCNVWILDGDLYHKGL 131 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~---------------~e~~kKg~gLeY~Yl~V~--DeDrdd~ar~~vWiLdg~~~~~~L 131 (523) |+|.|-.++||+||..+|.+ ........|.+|.|.+.. +.......-+..|.-++..|-.++ T Consensus 4 Ivi~GPsG~GK~tl~~~l~~~~~~~~~~~~~~ttR~~r~~E~~g~~y~fvs~~~f~~~i~~~~~~e~~~~~~~~yG~~~ 82 (186) T d1gky__ 4 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTV 82 (186) T ss_dssp EEEECCTTSSHHHHHHHHHHHCTTTEEECCEEECSCCCTTCCBTTTEEECCHHHHHHHHHTTCEEEEEEETTEEEEEEH T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHCCCCCCCHH T ss_conf 8997278877889999999867997057787752377533126721001487999999860442010000331001024 No 97 >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli} Probab=73.39 E-value=1.1 Score=20.71 Aligned_columns=24 Identities=33% Q ss_pred CCCEEEEEECCCCCHHHHHHHHHH Q ss_conf 876588973699767899999742 Q Ver_Hs_NP_0572 66 AGKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 66 ~~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) +-|+|++.|-.++||||+-..|++ T Consensus 1 ~~k~I~l~G~~GsGKtTia~~La~ 24 (169) T d1kaga_ 1 EKRNIFLVGPMGAGKSTIGRQLAQ 24 (169) T ss_dssp CCCCEEEECCTTSCHHHHHHHHHH T ss_pred CCEEEEEECCCCCCHHHHHHHHHH T ss_conf 961688875899867889999999 No 98 >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli} Probab=72.87 E-value=0.97 Score=20.94 Aligned_columns=20 Identities=30% Q ss_pred EEEEECCCCCHHHHHHHHHH Q ss_conf 88973699767899999742 Q Ver_Hs_NP_0572 70 VLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 70 ILvLG~~~sGKTtLl~~Lq~ 89 (523) |-|.|-+++|||||+.+|.+ T Consensus 5 v~i~G~~GSGKTTLl~~L~~ 24 (170) T d1np6a_ 5 LAFAAWSGTGKTTLLKKLIP 24 (170) T ss_dssp EEEECCTTSCHHHHHHHHHH T ss_pred EEEECCCCCCHHHHHHHHHH T ss_conf 99973699987899999999 No 99 >d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)} Probab=71.54 E-value=1.4 Score=19.80 Aligned_columns=23 Identities=39% Q ss_pred CCEEEEEECCCCCHHHHHHHHHH Q ss_conf 76588973699767899999742 Q Ver_Hs_NP_0572 67 GKNVLLLGEDGAGKTSLIRKIQG 89 (523) Q Consensus 67 ~KnILvLG~~~sGKTtLl~~Lq~ 89 (523) |+=|+|.|..++||||+.+.|.+ T Consensus 3 g~lI~i~G~~GsGKsT~~~~L~~ 25 (209) T d1nn5a_ 3 GALIVLEGVDRAGKSTQSRKLVE 25 (209) T ss_dssp CCEEEEEESTTSSHHHHHHHHHH T ss_pred CEEEEEECCCCCCHHHHHHHHHH T ss_conf 60789876899987899999999 No 100 >d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima} Probab=70.85 E-value=1.5 Score=19.59 Aligned_columns=28 Identities=32% Q ss_pred CCEEEEEECCCCCHHHHHHHHHHCCCCC Q ss_conf 7658897369976789999974201468 Q Ver_Hs_NP_0572 67 GKNVLLLGEDGAGKTSLIRKIQGIEEYK 94 (523) Q Consensus 67 ~KnILvLG~~~sGKTtLl~~Lq~~e~~k 94 (523) ++.++|+|-.++||||||.+|.+....+ T Consensus 95 ~~~~~ivG~sgVGKSTLIN~L~~~~~~~ 122 (225) T d1u0la2 95 GKISTMAGLSGVGKSSLLNAINPGLKLR 122 (225) T ss_dssp SSEEEEECSTTSSHHHHHHHHSTTCCCC T ss_pred CCEEEEECCCCCCHHHHHHHHCCHHHHH T ss_conf 1125787168988889998731645553 Done!