Query Ver_Hs_NP_006132.1_LIC2 Command /cluster/toolkit/production/bioprogs/hhpred/hhsearch -cal -cpu 4 -v 1 -i /cluster/toolkit/production/tmp/production/96183/s_NP_006132.hhm -d /cluster/toolkit/production/databases/hhpred/new_dbs/scop70_1.71/db/scop.hhm -o /cluster/toolkit/production/tmp/production/96183/s_NP_006132.hhr -p 20 -P 20 -Z 100 -B 100 -seq 1 -aliw 80 -local -ssm 2 -norealign -sc 1 No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1g16a_ c.37.1.8 (A:) Rab-rela 99.0 1.3E-08 1.2E-12 72.6 14.0 159 56-292 4-163 (166) 2 d1r2qa_ c.37.1.8 (A:) Rab5a {H 98.9 8.8E-09 8.4E-13 73.7 12.3 160 56-292 8-168 (170) 3 d1oiva_ c.37.1.8 (A:) Rab11a { 98.9 1.6E-08 1.5E-12 71.9 13.5 159 57-292 9-168 (168) 4 d1wmsa_ c.37.1.8 (A:) Rab9a {H 98.9 5.6E-08 5.3E-12 68.4 15.4 160 57-292 9-172 (174) 5 d1d5ca_ c.37.1.8 (A:) Rab6 {Ma 98.9 1.6E-08 1.5E-12 71.9 11.9 156 57-291 4-162 (162) 6 d1m7ba_ c.37.1.8 (A:) RhoE (RN 98.8 5.6E-08 5.3E-12 68.4 11.7 166 57-288 5-173 (179) 7 d1ukvy_ c.37.1.8 (Y:) GTPase Y 98.8 5.5E-08 5.3E-12 68.4 11.4 156 57-291 9-167 (204) 8 d3raba_ c.37.1.8 (A:) Rab3a {R 98.7 1.2E-07 1.2E-11 66.1 12.5 159 57-292 8-167 (169) 9 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 98.7 1.1E-07 1E-11 66.5 12.1 168 55-288 3-172 (177) 10 d1c1ya_ c.37.1.8 (A:) Rap1A {H 98.7 1.5E-07 1.4E-11 65.6 12.1 160 56-291 5-165 (167) 11 d2ngra_ c.37.1.8 (A:) CDC42 {H 98.7 3.5E-07 3.3E-11 63.2 14.0 175 57-299 6-184 (191) 12 d1mh1__ c.37.1.8 (-) Rac {Huma 98.7 9E-08 8.6E-12 67.0 10.7 170 57-292 8-179 (183) 13 d1u8za_ c.37.1.8 (A:) Ras-rela 98.7 9.1E-08 8.7E-12 67.0 10.7 160 57-292 7-166 (168) 14 d1kao__ c.37.1.8 (-) Rap2a {Hu 98.6 3E-07 2.9E-11 63.6 10.6 160 56-291 5-164 (167) 15 d1upta_ c.37.1.8 (A:) ADP-ribo 98.5 1.2E-06 1.2E-10 59.6 13.0 159 56-291 7-165 (169) 16 d1i2ma_ c.37.1.8 (A:) Ran {Hum 98.5 2.1E-07 2E-11 64.7 8.4 157 57-295 6-165 (170) 17 d1ky3a_ c.37.1.8 (A:) Rab-rela 98.5 1.7E-06 1.6E-10 58.7 12.6 164 56-292 4-171 (175) 18 d1moza_ c.37.1.8 (A:) ADP-ribo 98.4 8.1E-07 7.7E-11 60.8 10.0 175 34-291 2-177 (182) 19 d1ksha_ c.37.1.8 (A:) ADP-ribo 98.4 2.4E-06 2.3E-10 57.7 12.4 159 56-292 4-163 (165) 20 d1mkya2 c.37.1.8 (A:173-358) P 98.4 4.2E-06 4E-10 56.1 12.3 170 47-289 1-179 (186) 21 d1e0sa_ c.37.1.8 (A:) ADP-ribo 98.4 6.2E-06 5.9E-10 55.0 13.0 155 56-291 14-172 (173) 22 d1svsa1 c.37.1.8 (A:32-60,A:18 98.3 1.2E-05 1.1E-09 53.2 13.8 168 56-292 4-192 (195) 23 d1wf3a1 c.37.1.8 (A:3-180) GTP 98.3 7E-07 6.7E-11 61.2 6.6 173 50-300 2-178 (178) 24 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 98.2 1.9E-05 1.8E-09 51.9 13.4 162 56-291 5-167 (170) 25 d1udxa2 c.37.1.8 (A:157-336) O 98.2 1.8E-05 1.7E-09 52.0 13.3 171 56-301 3-177 (180) 26 d1ctqa_ c.37.1.8 (A:) cH-p21 R 98.2 1.6E-05 1.5E-09 52.3 13.0 158 57-291 6-163 (166) 27 d1r8sa_ c.37.1.8 (A:) ADP-ribo 98.2 5.1E-06 4.9E-10 55.5 9.3 159 56-291 2-160 (160) 28 d1fzqa_ c.37.1.8 (A:) ADP-ribo 98.1 1.9E-06 1.8E-10 58.3 6.6 158 57-291 19-176 (176) 29 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 98.1 7E-05 6.7E-09 48.1 13.5 164 56-292 4-168 (184) 30 d1mkya1 c.37.1.8 (A:2-172) Pro 98.1 1.4E-05 1.3E-09 52.8 9.5 157 56-291 2-163 (171) 31 d1wb1a4 c.37.1.8 (A:1-179) Elo 98.0 5.9E-06 5.6E-10 55.2 7.0 161 56-291 7-173 (179) 32 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 98.0 3.4E-05 3.2E-09 50.2 10.4 155 57-289 16-183 (186) 33 d1m2ob_ c.37.1.8 (B:) SAR1 {Ba 97.9 9.2E-05 8.8E-09 47.3 11.7 156 57-287 3-163 (167) 34 d1azsc2 c.37.1.8 (C:36-66,C:20 97.9 0.00027 2.6E-08 44.3 13.5 165 57-292 8-214 (223) 35 d1svia_ c.37.1.8 (A:) Probable 97.8 0.00011 1.1E-08 46.8 11.0 157 56-291 25-193 (195) 36 d1jnya3 c.37.1.8 (A:4-227) Elo 97.8 4E-05 3.8E-09 49.7 8.3 153 56-280 5-197 (224) 37 d1puia_ c.37.1.8 (A:) Probable 97.8 4.6E-05 4.4E-09 49.3 8.5 167 43-287 3-183 (188) 38 d1egaa1 c.37.1.8 (A:4-182) GTP 97.8 0.00012 1.2E-08 46.6 10.6 165 54-300 5-179 (179) 39 d1rfla_ c.37.1.8 (A:) Probable 97.8 6.4E-06 6.1E-10 54.9 3.5 158 56-295 9-170 (172) 40 d1kk1a3 c.37.1.8 (A:6-200) Ini 97.6 0.00066 6.3E-08 41.7 12.1 162 56-291 7-193 (195) 41 d1etu_1 c.37.1.8 (5-200) Elong 97.6 0.00022 2.1E-08 44.8 9.7 154 56-291 9-195 (196) 42 d1d2ea3 c.37.1.8 (A:55-250) El 97.5 0.00011 1E-08 46.9 6.9 154 56-291 5-193 (196) 43 d1f60a3 c.37.1.8 (A:2-240) Elo 97.5 6.2E-05 5.9E-09 48.5 5.6 157 56-280 8-198 (239) 44 d1xzpa2 c.37.1.8 (A:212-371) T 97.5 9.1E-05 8.7E-09 47.4 6.1 150 57-288 3-157 (160) 45 d1exma3 c.37.1.8 (A:3-212) Elo 97.4 0.00022 2.1E-08 44.8 7.6 143 56-274 11-173 (210) 46 d1lnza2 c.37.1.8 (A:158-342) O 97.3 9.5E-05 9.1E-09 47.2 4.5 170 56-295 3-175 (185) 47 d1r5ba3 c.37.1.8 (A:215-459) E 96.8 0.0049 4.7E-07 36.0 9.4 156 56-280 26-220 (245) 48 d1g7sa4 c.37.1.8 (A:1-227) Ini 96.8 0.0023 2.2E-07 38.2 7.5 167 55-289 4-214 (227) 49 d1nrjb_ c.37.1.8 (B:) Signal r 96.7 0.0036 3.5E-07 36.9 8.1 126 56-243 5-139 (209) 50 d1tq4a_ c.37.1.8 (A:) Interfer 96.5 0.026 2.5E-06 31.2 11.7 169 56-291 58-238 (400) 51 d1h65a_ c.37.1.8 (A:) Chloropl 96.2 0.0092 8.8E-07 34.2 7.9 154 38-262 16-186 (257) 52 d1okkd2 c.37.1.10 (D:97-303) G 94.1 0.016 1.5E-06 32.7 3.5 33 52-84 4-36 (207) 53 d1oxxk2 c.37.1.12 (K:1-242) Gl 93.6 0.24 2.3E-05 25.0 8.8 170 50-273 27-198 (242) 54 d1pzna2 c.37.1.11 (A:96-349) D 92.8 2.3 0.00022 18.5 12.8 146 51-273 33-188 (254) 55 d1fts_2 c.37.1.10 (285-495) GT 92.3 0.041 3.9E-06 30.0 3.4 35 50-84 5-39 (211) 56 d1mv5a_ c.37.1.12 (A:) Multidr 91.3 0.072 6.9E-06 28.4 3.7 35 50-84 24-58 (242) 57 d1q12a2 c.37.1.12 (A:4-235) Ma 91.2 0.36 3.4E-05 23.8 7.2 97 50-153 22-118 (232) 58 d1szpa2 c.37.1.11 (A:145-395) 91.2 1.5 0.00014 19.8 10.3 140 51-273 31-181 (251) 59 d1pf4a1 c.37.1.12 (A:321-564) 90.7 0.067 6.4E-06 28.6 3.1 70 50-120 45-114 (244) 60 d1v43a3 c.37.1.12 (A:7-245) Hy 90.0 0.087 8.3E-06 27.8 3.2 35 50-84 28-62 (239) 61 d1jj7a_ c.37.1.12 (A:) Peptide 89.8 0.094 8.9E-06 27.6 3.2 35 50-84 36-70 (251) 62 d1vpla_ c.37.1.12 (A:) Putativ 89.6 0.099 9.4E-06 27.5 3.2 35 50-84 24-58 (238) 63 d1s4qa_ c.37.1.1 (A:) Guanylat 89.6 0.091 8.7E-06 27.7 3.0 31 54-84 2-32 (183) 64 d1g6oa_ c.37.1.11 (A:) Hexamer 89.3 0.1 9.6E-06 27.4 3.1 21 54-74 166-186 (323) 65 d1sgwa_ c.37.1.12 (A:) Putativ 89.1 0.087 8.3E-06 27.8 2.6 35 50-84 23-57 (200) 66 d1mt0a_ c.37.1.12 (A:) Haemoly 88.9 0.076 7.3E-06 28.2 2.2 35 50-84 25-59 (241) 67 d1n0ua2 c.37.1.8 (A:3-343) Elo 88.8 1.2 0.00012 20.4 8.3 125 56-181 19-183 (341) 68 d1r0wa_ c.37.1.12 (A:) Cystic 88.6 0.14 1.3E-05 26.6 3.4 34 50-83 58-91 (281) 69 d1b0ua_ c.37.1.12 (A:) ATP-bin 87.7 0.16 1.5E-05 26.1 3.2 35 50-84 24-58 (258) 70 d1l2ta_ c.37.1.12 (A:) MJ0796 87.5 0.16 1.6E-05 26.0 3.2 35 50-84 27-61 (230) 71 d1ji0a_ c.37.1.12 (A:) Branche 87.4 0.32 3E-05 24.2 4.6 121 50-178 28-148 (240) 72 d1g2912 c.37.1.12 (1:1-240) Ma 87.4 0.14 1.4E-05 26.4 2.9 34 51-84 26-59 (240) 73 d1ixza_ c.37.1.20 (A:) AAA dom 87.2 0.18 1.7E-05 25.7 3.3 51 24-74 10-62 (247) 74 d1y63a_ c.37.1.1 (A:) Probable 86.4 0.23 2.2E-05 25.1 3.4 25 52-76 3-27 (174) 75 d1g6ha_ c.37.1.12 (A:) MJ1267 86.1 0.19 1.8E-05 25.7 2.9 35 50-84 26-60 (254) 76 d2ak3a1 c.37.1.1 (A:0-124,A:16 85.5 0.76 7.3E-05 21.6 5.8 102 51-161 3-147 (189) 77 d1u0la2 c.37.1.8 (A:69-293) Pr 84.6 1.4 0.00013 20.0 6.7 53 224-287 41-93 (225) 78 d3adk__ c.37.1.1 (-) Adenylate 83.9 0.22 2.1E-05 25.2 2.4 27 50-76 4-30 (194) 79 d1lw7a2 c.37.1.1 (A:220-411) T 83.9 0.24 2.3E-05 24.9 2.6 23 54-76 7-29 (192) 80 d1fnna2 c.37.1.20 (A:1-276) CD 83.8 1.2 0.00011 20.4 6.1 64 22-89 15-78 (276) 81 d1cr1a_ c.37.1.11 (A:) Gene 4 83.4 2.6 0.00025 18.1 7.7 163 51-273 32-194 (277) 82 d1dar_2 c.37.1.8 (1-282) Elong 83.0 0.38 3.6E-05 23.6 3.3 80 56-136 14-108 (282) 83 d1ak2_1 c.37.1.1 (14-146,177-2 82.3 0.43 4.1E-05 23.3 3.4 25 52-76 1-25 (190) 84 d1w1wa_ c.37.1.12 (A:) Smc hea 81.1 0.54 5.1E-05 22.7 3.5 26 51-76 22-47 (427) 85 d1t9ha2 c.37.1.8 (A:68-298) Pr 79.5 0.49 4.6E-05 22.9 2.9 57 54-110 97-154 (231) 86 d4tmka_ c.37.1.1 (A:) Thymidyl 79.4 0.58 5.6E-05 22.4 3.2 23 54-76 2-24 (210) 87 d1gvnb_ c.37.1.21 (B:) Plasmid 79.1 1 9.8E-05 20.8 4.4 47 29-76 8-54 (273) 88 d1l7vc_ c.37.1.12 (C:) ABC tra 78.9 0.4 3.8E-05 23.5 2.3 27 50-76 21-47 (231) 89 d1viaa_ c.37.1.2 (A:) Shikimat 78.9 0.51 4.9E-05 22.8 2.8 22 55-76 1-22 (161) 90 d1r7ra3 c.37.1.20 (A:471-735) 78.5 1.1 0.0001 20.7 4.3 51 24-74 8-61 (265) 91 d1gky__ c.37.1.1 (-) Guanylate 78.5 0.77 7.4E-05 21.6 3.6 64 55-118 2-82 (186) 92 d1puja_ c.37.1.8 (A:) Probable 78.4 2.2 0.00021 18.7 5.9 49 33-83 93-141 (273) 93 d1lv7a_ c.37.1.20 (A:) AAA dom 78.4 1.1 0.0001 20.6 4.4 52 24-76 13-67 (256) 94 d1nn5a_ c.37.1.1 (A:) Thymidyl 78.3 0.66 6.3E-05 22.1 3.3 23 54-76 3-25 (209) 95 d1d2na_ c.37.1.20 (A:) Hexamer 77.0 1.2 0.00011 20.4 4.2 35 39-76 28-62 (246) 96 d1u9ca_ c.23.16.2 (A:) GK2698 76.7 6.4 0.00061 15.6 7.9 90 227-325 5-114 (221) 97 d1rkba_ c.37.1.1 (A:) Adenylat 76.2 0.82 7.9E-05 21.4 3.2 30 55-92 5-34 (173) 98 d1e32a2 c.37.1.20 (A:201-458) 75.7 1.2 0.00011 20.5 3.9 51 24-74 5-58 (258) 99 d1w5sa2 c.37.1.20 (A:7-293) CD 75.4 1.4 0.00014 19.9 4.3 70 22-92 15-87 (287) 100 d1g41a_ c.37.1.20 (A:) HslU {H 74.2 0.95 9.1E-05 21.0 3.2 25 52-76 47-71 (443) No 1 >d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae)} Probab=98.96 E-value=1.3e-08 Score=72.60 Aligned_columns=159 Identities=18% Q ss_pred EEEEEECCCCCHHHHHHHHHCCC-CCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEE Q ss_conf 48886078854899999862013-36787431033530212134730010058856760211353224773433021020 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAE-HGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVI 134 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e-~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVv 134 (492) .|+|+|..++|||||+.+|.+.+ .......++..|....-...+...++.+|-..|...+..+.+..+.. --.++ T Consensus 4 Ki~ivG~~~vGKTsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~~----~d~~i 79 (166) T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYRG----AMGII 79 (166) T ss_dssp EEEEEESTTSSHHHHHHHHHHCCCCC-------CCEEEEEEESSSCEEEEEEECCTTGGGTSCCCHHHHTT----EEEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHCCC----CCEEE T ss_conf 89998079987999999986480077624454114688899875841368872057832000012433269----96899 Q ss_pred EHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCC Q ss_conf 00212032479999999999999999724888899999999999998620350005777767664545665400003688 Q Ver_Hs_NP_0061 135 FVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPL 214 (492) Q Consensus 135 I~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPL 214 (492) +|.|.+.|..+ +.+++|+..++.. T Consensus 80 ~v~d~~~~~s~-~~~~~~~~~i~~~------------------------------------------------------- 103 (166) T d1g16a_ 80 LVYDITDERTF-TNIKQWFKTVNEH------------------------------------------------------- 103 (166) T ss_dssp EEEETTCHHHH-HTHHHHHHHHHHH------------------------------------------------------- T ss_pred EEEECCCCCHH-HHHHHHHHHHHHC------------------------------------------------------- T ss_conf 99851565338-8999999998612------------------------------------------------------- Q ss_pred CCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH Q ss_conf 876221479940799850752255554205774778999999999999870873788456663567999999988872 Q Ver_Hs_NP_0061 215 GDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 215 geg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrly 292 (492) ..-++|++||.+|+| |+++.-..+| ++.|+-++|...+-||++...|++-+...|.+.++ T Consensus 104 ------~~~~~piivv~nK~D----l~~~~v~~~e--------~~~~~~~~~~~~~e~Sa~~g~gv~~lf~~l~~~i~ 163 (166) T d1g16a_ 104 ------ANDEAQLLLVGNKSD----METRVVTADQ--------GEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQ 163 (166) T ss_dssp ------SCTTCEEEEEEECTT----CTTCCSCHHH--------HHHHHHHHTCCEEECBTTTTBSHHHHHHHHHHHHH T ss_pred ------CCCCCCEEEEEECHH----HHHCCCCHHH--------HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH T ss_conf ------689851666763102----2200675889--------99999965993999961589888899999999999 No 2 >d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens)} Probab=98.93 E-value=8.8e-09 Score=73.66 Aligned_columns=160 Identities=20% Q ss_pred EEEEEECCCCCHHHHHHHHHCCC-CCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEE Q ss_conf 48886078854899999862013-36787431033530212134730010058856760211353224773433021020 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAE-HGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVI 134 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e-~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVv 134 (492) .|+++|..++|||||+.+|.+.+ .......+.-.|..+.-...+...++.+|-..|.-.+..+.+..+..- ..++ T Consensus 8 ki~liG~~~vGKSsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~----~~~i 83 (170) T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGA----QAAI 83 (170) T ss_dssp EEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGHHHHHTTC----SEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCCC----CEEE T ss_conf 899981799879999999864801566244202454345455579179998730677301123215540465----2899 Q ss_pred EHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCC Q ss_conf 00212032479999999999999999724888899999999999998620350005777767664545665400003688 Q Ver_Hs_NP_0061 135 FVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPL 214 (492) Q Consensus 135 I~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPL 214 (492) +|.|.+++..+ +.+..|+.-++..... T Consensus 84 ~v~d~~~~~s~-~~~~~~~~~~~~~~~~---------------------------------------------------- 110 (170) T d1r2qa_ 84 VVYDITNEESF-ARAKNWVKELQRQASP---------------------------------------------------- 110 (170) T ss_dssp EEEETTCHHHH-HHHHHHHHHHHHHSCT---------------------------------------------------- T ss_pred EEEECCCHHHH-HHHHHHHHHHHHHCCC---------------------------------------------------- T ss_conf 99625301468-9999999998750378---------------------------------------------------- Q ss_pred CCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH Q ss_conf 876221479940799850752255554205774778999999999999870873788456663567999999988872 Q Ver_Hs_NP_0061 215 GDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 215 geg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrly 292 (492) .+|+++|.+|+|. .++-.+-+..++.|+-.+++..+.||++...|++-+..+|.++++ T Consensus 111 ---------~~piilVgnK~Dl-----------~~~~~v~~~~~~~~~~~~~~~~~e~Sa~~~~gi~elf~~l~~~i~ 168 (170) T d1r2qa_ 111 ---------NIVIALSGNKADL-----------ANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLP 168 (170) T ss_dssp ---------TCEEEEEEECGGG-----------GGGCCSCHHHHHHHHHHTTCEEEECCTTTCTTHHHHHHHHHHTSC T ss_pred ---------CEEEEEEEEHHHH-----------HHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHC T ss_conf ---------5577753200102-----------210477989999999955981899862689788899999999832 No 3 >d1oiva_ c.37.1.8 (A:) Rab11a {Human (Homo sapiens)} Probab=98.93 E-value=1.6e-08 Score=71.95 Aligned_columns=159 Identities=21% Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCC-CCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEE Q ss_conf 8886078854899999862013367874-310335302121347300100588567602113532247734330210200 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e~~kkg~-gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI 135 (492) |+|+|+.++|||||+.+|.+.+-..... ..+..+....-...+..-++.+|-..|...+..+-+..+..-.. ++| T Consensus 9 i~ivG~~~vGKSSLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~~~~~~~~~~~d~----~i~ 84 (168) T d1oiva_ 9 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVG----ALL 84 (168) T ss_dssp EEEESSTTSSHHHHHHHHHHSCCCSSCCCCSSEEEEEEEEEETTEEEEEEEEEECSCCCCHHHHHHHHTTEEE----EEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCCCCE----EEE T ss_conf 9998369987999999986580343655326533422789988948999985067830123555776227878----999 Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCC Q ss_conf 02120324799999999999999997248888999999999999986203500057777676645456654000036888 Q Ver_Hs_NP_0061 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLG 215 (492) Q Consensus 136 ~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLg 215 (492) |.|.+.+ .-++.+.+|+.-++...... T Consensus 85 v~d~~~~-~s~~~i~~~~~~i~~~~~~~---------------------------------------------------- 111 (168) T d1oiva_ 85 VYDIAKH-LTYENVERWLKELRDHADSN---------------------------------------------------- 111 (168) T ss_dssp EEETTCH-HHHHTHHHHHHHHHHHSCTT---------------------------------------------------- T ss_pred EEEECCC-CHHHHHHHHHHHHHHHCCCC---------------------------------------------------- T ss_conf 9984263-01688999999998614895---------------------------------------------------- Q ss_pred CCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH Q ss_conf 76221479940799850752255554205774778999999999999870873788456663567999999988872 Q Ver_Hs_NP_0061 216 DNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 216 eg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrly 292 (492) +|++||++|+| |+++..-..|+ .|.||-++|+..+-||+|...|++-+.+.|+-++| T Consensus 112 ---------~piiivgnK~D----l~~~~~v~~~~-------~~~~~~~~~~~~~e~Sak~g~~i~e~f~~ii~~i~ 168 (168) T d1oiva_ 112 ---------IVIMLVGNKSD----LRHLRAVPTDE-------ARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 168 (168) T ss_dssp ---------CEEEEEEECTT----CGGGCCSCHHH-------HHHHHHHHTCEEEECCTTTCTTHHHHHHHHHHHHC T ss_pred ---------EEEEEEEECCC----HHHCCCCCHHH-------HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHC T ss_conf ---------38996110001----22203779899-------99999963993899971689787899999999709 No 4 >d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens)} Probab=98.90 E-value=5.6e-08 Score=68.40 Aligned_columns=160 Identities=23% Q ss_pred EEEEECCCCCHHHHHHHHHC---CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEE Q ss_conf 88860788548999998620---133678743103353021213473001005885676021135322477343302102 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQG---AEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLV 133 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~---~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlV 133 (492) |+|+|..++|||+|+.++.+ .+......+.+|....+..+ +..-++.+|-..|.-.+..+.+..+..-. .+ T Consensus 9 ivivG~~~vGKTsLi~~~~~~~~~~~~~~t~~~~~~~~~i~~~--~~~i~l~~~d~~~~~~~~~~~~~~~~~~d----~~ 82 (174) T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVD--GHFVTMQIWDTAGQERFRSLRTPFYRGSD----CC 82 (174) T ss_dssp EEEECCTTSSHHHHHHHHHHSCCCC----CCSEEEEEEEEEET--TEEEEEEEEECCCCGGGHHHHGGGGTTCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECEEEEEEEEC--CEEEEEEEEECCCCCHHHHHHHEECCCCE----EE T ss_conf 9998179987899999986381356533315511056799998--97999998312473001021100126865----89 Q ss_pred EEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCC Q ss_conf 00021203247999999999999999972488889999999999999862035000577776766454566540000368 Q Ver_Hs_NP_0061 134 IFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALP 213 (492) Q Consensus 134 vI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lP 213 (492) |+|.|.+.|+++ +.+..|..-++.+..... T Consensus 83 i~v~d~~~~~s~-~~i~~~~~~i~~~~~~~~------------------------------------------------- 112 (174) T d1wmsa_ 83 LLTFSVDDSQSF-QNLSNWKKEFIYYADVKE------------------------------------------------- 112 (174) T ss_dssp EEEEETTCHHHH-HTHHHHHHHHHHHHTCSC------------------------------------------------- T ss_pred EEEEECCCHHHH-HHHHHHHHHHHHHHCCCC------------------------------------------------- T ss_conf 998635886789-999899999998710036------------------------------------------------- Q ss_pred CCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC-CEEEEECCCCCCCHHHHHHHHHHHHH Q ss_conf 88762214799407998507522555542057747789999999999998708-73788456663567999999988872 Q Ver_Hs_NP_0061 214 LGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYG-AALIYTSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 214 Lgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YG-AsLiYTS~ke~kNl~lLykYi~Hrly 292 (492) .-++|+++|++|+|.. +.....|+ ++.++-+++ ...|.||++...|++-+...++.+++ T Consensus 113 --------~~~~piiivgnK~Dl~-----~~~v~~ee-------~~~~~~~~~~~~~~e~Sak~~~~I~e~f~~li~~il 172 (174) T d1wmsa_ 113 --------PESFPFVILGNKIDIS-----ERQVSTEE-------AQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 172 (174) T ss_dssp --------TTTSCEEEEEECTTCS-----SCSSCHHH-------HHHHHHHTTCCCEEECCTTTCTTHHHHHHHHHHHHH T ss_pred --------CCCCCEEEEECCCCCC-----CCCCCHHH-------HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH T ss_conf --------7885289995145754-----35569899-------999999707982799860589888899999999995 No 5 >d1d5ca_ c.37.1.8 (A:) Rab6 {Malaria parasite (Plasmodium falciparum)} Probab=98.87 E-value=1.6e-08 Score=71.94 Aligned_columns=156 Identities=22% Q ss_pred EEEEECCCCCHHHHHHHHHC---CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEE Q ss_conf 88860788548999998620---133678743103353021213473001005885676021135322477343302102 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQG---AEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLV 133 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~---~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlV 133 (492) |+|+|..++|||||+.+|.+ .+....+.+.+|....+ ...+..-++.+|...|...+....+..+..-. .+ T Consensus 4 i~i~G~~~vGKSsLi~~l~~~~~~~~~~~t~~~~~~~~~~--~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~d----~~ 77 (162) T d1d5ca_ 4 LVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTL--YLDEGPVRLQLWDTAGQERFRSLIPSYIRDSA----AA 77 (162) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCTTCCCCCCCEEEEEEE--EETTEEEEEEEEECCCSGGGGGGHHHHHTTCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEE--EECCEEEEEEEECCCCCCHHHHHHHHHHCCCC----EE T ss_conf 8998179987999999986480156613315546777897--30881699986237652033456677632683----89 Q ss_pred EEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCC Q ss_conf 00021203247999999999999999972488889999999999999862035000577776766454566540000368 Q Ver_Hs_NP_0061 134 IFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALP 213 (492) Q Consensus 134 vI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lP 213 (492) +++.|.+.++.+ +++..|+.-++..... T Consensus 78 i~v~d~~~~~s~-~~~~~~l~~i~~~~~~--------------------------------------------------- 105 (162) T d1d5ca_ 78 IVVYDITNRQSF-ENTTKWIQDILNERGK--------------------------------------------------- 105 (162) T ss_dssp EEEEETTCHHHH-HTHHHHHHHHHHHHTT--------------------------------------------------- T ss_pred EEEEECCCCCCH-HHHHHHHHHHHHHCCC--------------------------------------------------- T ss_conf 999744666777-8999999999751248--------------------------------------------------- Q ss_pred CCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 887622147994079985075225555420577477899999999999987087378845666356799999998887 Q Ver_Hs_NP_0061 214 LGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 214 Lgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) ..|++||++|+|. .++-.+....++.++-++|+..+.||++...|++-|.+-|.-++ T Consensus 106 ----------~~piilvgnK~Dl-----------~~~~~v~~~~~~~~~~~~~~~~~~~Sa~~g~gv~~lf~~i~~~l 162 (162) T d1d5ca_ 106 ----------DVIIALVGNKTDL-----------GDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTASKL 162 (162) T ss_dssp ----------SSEEEEEEECGGG-----------GGGCCSCHHHHHHHHHHTTCEEEECBTTTTBSCHHHHHHHHHCC T ss_pred ----------CEEEEEEEECCCC-----------CCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHC T ss_conf ----------6578997521465-----------32245488999999996499299997268968789999999839 No 6 >d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus)} Probab=98.77 E-value=5.6e-08 Score=68.42 Aligned_columns=166 Identities=20% Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEH Q ss_conf 88860788548999998620133678743103353021213473001005885676021135322477343302102000 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFV 136 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI~ 136 (492) |+|+|+.++|||+|+.++.+.+........-.....+.=...+..-++.+|-..|...+.++.+.....-+ .+||| T Consensus 5 I~iiG~~~vGKTsli~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~~~~~~~~~~~d----~~iiv 80 (179) T d1m7ba_ 5 IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSD----AVLIC 80 (179) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEEEEEECSSCEEEEEEEEECCSGGGTTTGGGGCTTCS----EEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHCCCC----EEEEE T ss_conf 99970699878999999862823666343367621343201331102686114432100000056632786----57999 Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCC Q ss_conf 21203247999999999999999972488889999999999999862035000577776766454566540000368887 Q Ver_Hs_NP_0061 137 ADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLGD 216 (492) Q Consensus 137 lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLge 216 (492) -|++.++.+-.-++.|...++.. T Consensus 81 ydv~~~~Sf~~i~~~~~~~~~~~--------------------------------------------------------- 103 (179) T d1m7ba_ 81 FDISRPETLDSVLKKWKGEIQEF--------------------------------------------------------- 103 (179) T ss_dssp EETTCHHHHHHHHHTHHHHHHHH--------------------------------------------------------- T ss_pred EECCCCHHHHHHHHHHHHHHHHH--------------------------------------------------------- T ss_conf 80686035788988777777640--------------------------------------------------------- Q ss_pred CCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHH-HHHHHHHHCCCEEEE-ECCCCCCC-HHHHHHHHH Q ss_conf 6221479940799850752255554205774778999999-999999870873788-45666356-799999998 Q Ver_Hs_NP_0061 217 NVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQS-HLRRFCLQYGAALIY-TSVKEEKN-LDLLYKYIV 288 (492) Q Consensus 217 g~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq-~LR~~cL~YGAsLiY-TS~ke~kN-l~lLykYi~ 288 (492) .-.+|+++|++|+|.-+......+...+.--.|.+ -.+.+|-++||..+| ||++...| ++-+.+.+. T Consensus 104 -----~~~~piilvgnK~DL~~~~~~~~~~~~~~~~~Vs~~e~~~la~~~~~~~y~E~SA~t~~n~v~~~F~~~~ 173 (179) T d1m7ba_ 104 -----CPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVAT 173 (179) T ss_dssp -----CTTCEEEEEEECGGGGGCHHHHHHHHTTTCCCCCHHHHHHHHHHHTCSEEEECBTTTBHHHHHHHHHHHH T ss_pred -----CCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH T ss_conf -----2674157875266632103456654430376589899999999708952898750368840899999999 No 7 >d1ukvy_ c.37.1.8 (Y:) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae)} Probab=98.76 E-value=5.5e-08 Score=68.44 Aligned_columns=156 Identities=17% Q ss_pred EEEEECCCCCHHHHHHHHHC---CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEE Q ss_conf 88860788548999998620---133678743103353021213473001005885676021135322477343302102 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQG---AEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLV 133 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~---~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlV 133 (492) |+|+|+.++||||||.++.+ ........+.+|.+..+..... ..++.+|-..|...+..+.+....--. .+ T Consensus 9 I~iiG~~~vGKTSLi~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~--~~~i~i~D~~g~e~~~~~~~~~~~~ad----~i 82 (204) T d1ukvy_ 9 LLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGK--TVKLQIWDTAGQERFRTITSSYYRGSH----GI 82 (204) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCTTCCCSSCCCEEEEEEEETTE--EEEEEEECCTTTTTTTCCCHHHHTTCS----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCE--EEEEEEECCCCCCHHHHHHHHHHCCCC----EE T ss_conf 889816997799999998648105762452112466889988886--887443026773012345677614797----47 Q ss_pred EEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCC Q ss_conf 00021203247999999999999999972488889999999999999862035000577776766454566540000368 Q Ver_Hs_NP_0061 134 IFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALP 213 (492) Q Consensus 134 vI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lP 213 (492) |+|.|.+.+.. ++.+..|+.-+...... T Consensus 83 ilvfd~~d~~S-~~~~~~~~~~i~~~~~~--------------------------------------------------- 110 (204) T d1ukvy_ 83 IIVYDVTDQES-FNGVKMWLQEIDRYATS--------------------------------------------------- 110 (204) T ss_dssp EEEEETTCHHH-HHHHHHHHHHHHHHSCT--------------------------------------------------- T ss_pred EEEEECCCHHH-HHHHHHHHHHHHHHHCC--------------------------------------------------- T ss_conf 99985166012-33568999998653102--------------------------------------------------- Q ss_pred CCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 887622147994079985075225555420577477899999999999987087378845666356799999998887 Q Ver_Hs_NP_0061 214 LGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 214 Lgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) .+|+++|++|+|. +++-.+-..-.+.||-.+++..|-||++...|++-++..|...+ T Consensus 111 ----------~~~iiivgnK~D~-----------~~~~~v~~~e~~~~~~~~~~~~~e~SAk~~~gi~e~f~~i~~~i 167 (204) T d1ukvy_ 111 ----------TVLKLLVGNKCDL-----------KDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 167 (204) T ss_dssp ----------TCEEEEEEECTTC-----------TTTCCSCHHHHHHHHHHTTCCEEECCTTTCTTHHHHHHHHHHHH T ss_pred ----------CCEEEEEEECCCC-----------HHCCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH T ss_conf ----------4102455411340-----------01025418999999996198189995168988899999999999 No 8 >d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus)} Probab=98.73 E-value=1.2e-07 Score=66.14 Aligned_columns=159 Identities=18% Q ss_pred EEEEECCCCCHHHHHHHHHCCC-CCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEE Q ss_conf 8886078854899999862013-367874310335302121347300100588567602113532247734330210200 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAE-HGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e-~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI 135 (492) |+|+|..++||||||.+|.+.+ ........+..+....-...+.......|...|...+..+-+........ +++ T Consensus 8 I~ivG~~~vGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~----~i~ 83 (169) T d3raba_ 8 ILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMG----FIL 83 (169) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGHHHHHTTTTTCCE----EEE T ss_pred EEEEECCCCCHHHHHHHHHCCEECCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHEE----EEE T ss_conf 8998369987999999985680034521123421136777645820367872167630233454443211101----133 Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCC Q ss_conf 02120324799999999999999997248888999999999999986203500057777676645456654000036888 Q Ver_Hs_NP_0061 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLG 215 (492) Q Consensus 136 ~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLg 215 (492) +.|.+.+.. ..++..|...++... T Consensus 84 v~d~~~~~s-~~~~~~~~~~i~~~~------------------------------------------------------- 107 (169) T d3raba_ 84 MYDITNEES-FNAVQDWSTQIKTYS------------------------------------------------------- 107 (169) T ss_dssp EEETTCHHH-HHTHHHHHHHHHHHC------------------------------------------------------- T ss_pred EEECCCCCH-HHHHHHHHHHHHHCC------------------------------------------------------- T ss_conf 320222210-345566655532101------------------------------------------------------- Q ss_pred CCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH Q ss_conf 76221479940799850752255554205774778999999999999870873788456663567999999988872 Q Ver_Hs_NP_0061 216 DNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 216 eg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrly 292 (492) ...+|+++|++|+|. .+......+..+.+|-.+|...+.||++...+++-+...|+..++ T Consensus 108 ------~~~~pii~v~nK~D~-----------~~~~~~~~~~~~~~~~~~~~~~~e~Sa~~~~gi~e~f~~l~~~i~ 167 (169) T d3raba_ 108 ------WDNAQVLLVGNKCDM-----------EDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVIC 167 (169) T ss_dssp ------CSCCEEEEEEECTTC-----------GGGCCSCHHHHHHHHHHHTCEEEECBTTTTBSHHHHHHHHHHHHH T ss_pred ------CCCCEEEEHHHHCCH-----------HHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH T ss_conf ------377326850121241-----------330044289999999964980899862689888899999999985 No 9 >d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens)} Probab=98.72 E-value=1.1e-07 Score=66.54 Aligned_columns=168 Identities=17% Q ss_pred CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEE Q ss_conf 64888607885489999986201336787431033530212134730010058856760211353224773433021020 Q Ver_Hs_NP_0061 55 KNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVI 134 (492) Q Consensus 55 KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVv 134 (492) |-|+|+|+.++|||||+.+|.+.+-...-.........+.-...+....+.+|-..|...+..+.+..+..-. .++ T Consensus 3 ~KI~iiG~~~vGKSsli~~l~~~~~~~~~~~t~~~~~~~~i~~~~~~~~~~i~D~~g~~~~~~~~~~~~~~~~----~~i 78 (177) T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDYDRLRPLSYPDTD----VIL 78 (177) T ss_dssp EEEEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGTTTGGGGCTTCS----EEE T ss_pred EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCEEEEEEEECCCCCCCCCCHHCCCCCCC----EEE T ss_conf 5899982699879999999862733565355035567899864593676678534775322311000110455----489 Q ss_pred EHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCC Q ss_conf 00212032479999999999999999724888899999999999998620350005777767664545665400003688 Q Ver_Hs_NP_0061 135 FVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPL 214 (492) Q Consensus 135 I~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPL 214 (492) +|.|.+.+..|-+-.+.|...++.... T Consensus 79 lv~d~~~~~sf~~~~~~~~~~~~~~~~----------------------------------------------------- 105 (177) T d1kmqa_ 79 MCFSIDSPDSLENIPEKWTPEVKHFCP----------------------------------------------------- 105 (177) T ss_dssp EEEETTCHHHHHHHHHTHHHHHHHHST----------------------------------------------------- T ss_pred EEEECCCHHHHHHHHHHHHHHHHHCCC----------------------------------------------------- T ss_conf 998078545799998766899863279----------------------------------------------------- Q ss_pred CCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHH-HHHHHHHHHHCCCEEEE-ECCCCCCCHHHHHHHHH Q ss_conf 8762214799407998507522555542057747789999-99999999870873788-45666356799999998 Q Ver_Hs_NP_0061 215 GDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFI-QSHLRRFCLQYGAALIY-TSVKEEKNLDLLYKYIV 288 (492) Q Consensus 215 geg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~I-qq~LR~~cL~YGAsLiY-TS~ke~kNl~lLykYi~ 288 (492) .+|+++|++|+|..+.-+-+....+.....| ....+.+|-++|.--+| ||++...|++-+...++ T Consensus 106 ---------~~piiivgnK~Dl~~~~~~~~~~~~~~~~~i~~~~~~~~a~~~~~~~~~e~Sak~~~gv~e~f~~~~ 172 (177) T d1kmqa_ 106 ---------NVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 172 (177) T ss_dssp ---------TSCEEEEEECGGGTTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSEEEECCTTTCTTHHHHHHHHH T ss_pred ---------CEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHH T ss_conf ---------7089998605675533025688886522468989999999972894279875058878889999999 No 10 >d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens)} Probab=98.70 E-value=1.5e-07 Score=65.65 Aligned_columns=160 Identities=18% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEE Q ss_conf 48886078854899999862013367874310335302121347300100588567602113532247734330210200 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI 135 (492) .|+|+|+.++|||||+.+|.+.+....-...-.......=......-.+.+|-..|...+..+.+....--. .+|| T Consensus 5 Ki~iiG~~~vGKTsLi~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~D~~g~~~~~~~~~~~~~~~~----~~i~ 80 (167) T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQ----GFAL 80 (167) T ss_dssp EEEEECSTTSSHHHHHHHHHHCCCCCSCCCCSEEEEEEEEESSSCEEEEEEEEECSSCSSTTHHHHHHHHCS----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHCCCC----EEEE T ss_conf 899981799878999999862733554564002026889987141456777622566302355576506886----8999 Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCC Q ss_conf 02120324799999999999999997248888999999999999986203500057777676645456654000036888 Q Ver_Hs_NP_0061 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLG 215 (492) Q Consensus 136 ~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLg 215 (492) |.|.+.|++|-. +.+|..-+..+... T Consensus 81 v~d~~~~~s~~~-~~~~~~~~~~~~~~----------------------------------------------------- 106 (167) T d1c1ya_ 81 VYSITAQSTFND-LQDLREQILRVKDT----------------------------------------------------- 106 (167) T ss_dssp EEETTCHHHHHT-HHHHHHHHHHHHCC----------------------------------------------------- T ss_pred EECCCCCCCHHH-HHHHHHHHHHHCCC----------------------------------------------------- T ss_conf 830676642688-99999999975068----------------------------------------------------- Q ss_pred CCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC-CCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 76221479940799850752255554205774778999999999999870-87378845666356799999998887 Q Ver_Hs_NP_0061 216 DNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQY-GAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 216 eg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~Y-GAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) -.+|+++|++|+|. .++-.+-.+..+.++-++ ++..|.||++...|++-|...|+-.+ T Consensus 107 -------~~~piilvgnK~Dl-----------~~~~~v~~~e~~~~~~~~~~~~~~e~Sak~~~~v~elf~~l~~~i 165 (167) T d1c1ya_ 107 -------EDVPMILVGNKCDL-----------EDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQI 165 (167) T ss_dssp -------SCCCEEEEEECTTC-----------GGGCCSCHHHHHHHHHHTTSCEEEECBTTTTBSHHHHHHHHHHHH T ss_pred -------CCEEEEEEEECCCC-----------CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH T ss_conf -------97089998504780-----------001478989999999984497078885058988889999999985 No 11 >d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens)} Probab=98.70 E-value=3.5e-07 Score=63.22 Aligned_columns=175 Identities=18% Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEH Q ss_conf 88860788548999998620133678743103353021213473001005885676021135322477343302102000 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFV 136 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI~ 136 (492) |+|+|+.++|||||+.++-..+-...........+.+.-...+..-++.+|-..|...+..+.+..... --.+++| T Consensus 6 i~iiG~~~vGKSsli~~~~~~~f~~~~~~t~~~~~~~~~~~~~~~i~~~i~D~~g~~~~~~~~~~~~~~----~~~~ilv 81 (191) T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQ----TDVFLVC 81 (191) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCSSCCCCSEEEEEEEEEETTEEEEEEEEEECCSGGGTTTGGGGCTT----CSEEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHHHCCC----CEEEEEE T ss_conf 999807997789999998718546653552023357787626647999973146762144664542055----2789998 Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCC Q ss_conf 21203247999999999999999972488889999999999999862035000577776766454566540000368887 Q Ver_Hs_NP_0061 137 ADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLGD 216 (492) Q Consensus 137 lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLge 216 (492) -|.+.|+++-+--+.|...++.+.. T Consensus 82 ~d~~~~~Sf~~~~~~~~~~~~~~~~------------------------------------------------------- 106 (191) T d2ngra_ 82 FSVVSPSSFENVKEKWVPEITHHCP------------------------------------------------------- 106 (191) T ss_dssp EETTCHHHHHHHHHTHHHHHHHHCT------------------------------------------------------- T ss_pred EECCCHHHHHHHHHHHHHHHHHCCC------------------------------------------------------- T ss_conf 7146855899988877888752378------------------------------------------------------- Q ss_pred CCEECCCCCEEEEEEECCCH---HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC-EEEEECCCCCCCHHHHHHHHHHHHH Q ss_conf 62214799407998507522---5555420577477899999999999987087-3788456663567999999988872 Q Ver_Hs_NP_0061 217 NVLTHNLGIPVLVVCTKCDA---VSVLEKEHDYRDEHLDFIQSHLRRFCLQYGA-ALIYTSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 217 g~Lt~NLGiPi~VVctKsD~---ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGA-sLiYTS~ke~kNl~lLykYi~Hrly 292 (492) ++|+++|++|+|. ....++- ..+.+-.+-....+.+|-++++ ..|-||++...|++-+...++.-.+ T Consensus 107 -------~ipiilvgnK~Dl~~~~~~~~~~--~~~~~r~v~~~~~~~~a~~~~~~~~~E~SA~tg~gI~e~f~~~i~~~l 177 (191) T d2ngra_ 107 -------KTPFLLVGTQIDLRDDPSTIEKL--AKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 (191) T ss_dssp -------TCCEEEEEECGGGGGCHHHHHHH--HTTTCCCCCHHHHHHHHHHTTCSCEEECCTTTCTTHHHHHHHHHHHHT T ss_pred -------CCEEEEEECCCCCCCCHHHHHHH--HHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH T ss_conf -------74389974052433220267888--740467767789999999808970899860478777899999999985 Q ss_pred CCCCCCC Q ss_conf 7776765 Q Ver_Hs_NP_0061 293 GFHFTTP 299 (492) Q Consensus 293 gfpf~~k 299 (492) .=+...+ T Consensus 178 ~~~~~~~ 184 (191) T d2ngra_ 178 EPPEPKK 184 (191) T ss_dssp SCCSTTC T ss_pred CCCCCCC T ss_conf 4778887 No 12 >d1mh1__ c.37.1.8 (-) Rac {Human (Homo sapiens)} Probab=98.68 E-value=9e-08 Score=67.04 Aligned_columns=170 Identities=17% Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEH Q ss_conf 88860788548999998620133678743103353021213473001005885676021135322477343302102000 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFV 136 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI~ 136 (492) |+++|+.++|||||+.+|.+.+................-.-.+..-.+.+|-..|.-.+..+.+..+..-+ ++++| T Consensus 8 i~iiG~~~vGKTsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~l~i~d~~g~~~~~~~~~~~~~~~~----~~ilv 83 (183) T d1mh1__ 8 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTD----VSLIC 83 (183) T ss_dssp EEEECSTTSSHHHHHHHHHHSSCCSSCCCCSCCEEEEEEEETTEEEEEEEECCCCSGGGTTTGGGGCTTCS----EEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEECCCCCHHHHHHCCCCCCCCC----EEEEE T ss_conf 99980799879999999861733665344056678889998006877665115431011000102123321----78999 Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCC Q ss_conf 21203247999999999999999972488889999999999999862035000577776766454566540000368887 Q Ver_Hs_NP_0061 137 ADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLGD 216 (492) Q Consensus 137 lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLge 216 (492) .|.+.++++-+-.+.|...++....+ T Consensus 84 ~di~~~~s~~~~~~~~~~~~~~~~~~------------------------------------------------------ 109 (183) T d1mh1__ 84 FSLVSPASFENVRAKWYPEVRHHCPN------------------------------------------------------ 109 (183) T ss_dssp EETTCHHHHHHHHHTHHHHHHHHSTT------------------------------------------------------ T ss_pred EECCCCHHHHHHHHHHHHHHHHCCCC------------------------------------------------------ T ss_conf 74356025888878878887523788------------------------------------------------------ Q ss_pred CCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHH-HHHHHHHHHHCCCEEEE-ECCCCCCCHHHHHHHHHHHHH Q ss_conf 62214799407998507522555542057747789999-99999999870873788-456663567999999988872 Q Ver_Hs_NP_0061 217 NVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFI-QSHLRRFCLQYGAALIY-TSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 217 g~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~I-qq~LR~~cL~YGAsLiY-TS~ke~kNl~lLykYi~Hrly 292 (492) +|+++|.+|+|..+.-+-.....+.....| ....+.+|=++|+..++ ||++...|++-++..++.-++ T Consensus 110 --------~piiivgnK~D~~~~~~~~~~~~~~~~~~i~~~e~~~~a~~~~~~~~~e~Sa~~~~gI~e~f~~~ir~~l 179 (183) T d1mh1__ 110 --------TPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 179 (183) T ss_dssp --------SCEEEEEECHHHHTCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCSEEEECCTTTCTTHHHHHHHHHHHHS T ss_pred --------CEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHC T ss_conf --------1799986066751101355667764137677789999999718950799760478787899999999960 No 13 >d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus)} Probab=98.68 E-value=9.1e-08 Score=67.02 Aligned_columns=160 Identities=16% Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEH Q ss_conf 88860788548999998620133678743103353021213473001005885676021135322477343302102000 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFV 136 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI~ 136 (492) |+++|+.++|||||+.++.+.+.........-..........+....+.+|-..|.-.+..+.+..+.--. .+++| T Consensus 7 i~iiG~~~vGKTsli~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~d----~~i~v 82 (168) T d1u8za_ 7 VIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGE----GFLCV 82 (168) T ss_dssp EEEECSTTSSHHHHHHHHHHSCCCSCCCTTCCEEEEEEEEETTEEEEEEEEECCC---CHHHHHHHHHHCS----EEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCHHHHCCCCC----EEEEE T ss_conf 99982799878999999864832677245326788999998116875478742356420100010002442----79999 Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCC Q ss_conf 21203247999999999999999972488889999999999999862035000577776766454566540000368887 Q Ver_Hs_NP_0061 137 ADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLGD 216 (492) Q Consensus 137 lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLge 216 (492) .|.+++.. .+.+..|..-+. T Consensus 83 ~d~~~~~s-~~~i~~~~~~~~----------------------------------------------------------- 102 (168) T d1u8za_ 83 FSITEMES-FAATADFREQIL----------------------------------------------------------- 102 (168) T ss_dssp EETTCHHH-HHHHHHHHHHHH----------------------------------------------------------- T ss_pred EEECCCCC-HHHHHHHHHHHH----------------------------------------------------------- T ss_conf 86147321-689998889998----------------------------------------------------------- Q ss_pred CCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH Q ss_conf 6221479940799850752255554205774778999999999999870873788456663567999999988872 Q Ver_Hs_NP_0061 217 NVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 217 g~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrly 292 (492) ....+-++|+++|++|+|. .++-.+.++.++.|+-+++...+-||++...|++-+...++..+. T Consensus 103 -~~~~~~~~piiiv~nK~Dl-----------~~~~~v~~~~~~~~~~~~~~~~~e~Sak~~~~i~e~f~~l~~~i~ 166 (168) T d1u8za_ 103 -RVKEDENVPFLLVGNKSDL-----------EDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIR 166 (168) T ss_dssp -HHHCCTTSCEEEEEECGGG-----------GGGCCSCHHHHHHHHHHHTCEEEECCTTTCTTHHHHHHHHHHHHH T ss_pred -HHCCCCCCEEEEEEECCCC-----------CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH T ss_conf -5307999389999505670-----------011577889999999964995899972589888899999999996 No 14 >d1kao__ c.37.1.8 (-) Rap2a {Human (Homo sapiens)} Probab=98.56 E-value=3e-07 Score=63.63 Aligned_columns=160 Identities=20% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEE Q ss_conf 48886078854899999862013367874310335302121347300100588567602113532247734330210200 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI 135 (492) .|+++|+.++|||+|+.+|.+.+....-.....-+....=...+..-++.+|-..|.-.+..+.+.....-. .+++ T Consensus 5 kI~iiG~~~vGKTsli~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~~----~ii~ 80 (167) T d1kao__ 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQ----GFIL 80 (167) T ss_dssp EEEEECCTTSSHHHHHHHHHHSCCCSCCCTTCCEEEEEEEEETTEEEEEEEEECCCTTCCHHHHHHHHHHCS----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHCCCC----EEEE T ss_conf 899980799878999999864812676465201357999998357899998514674312344576512663----6899 Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCC Q ss_conf 02120324799999999999999997248888999999999999986203500057777676645456654000036888 Q Ver_Hs_NP_0061 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLG 215 (492) Q Consensus 136 ~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLg 215 (492) |.|.+.+.+|-.--+.|...++ T Consensus 81 v~d~~~~~s~~~~~~~~~~~~~---------------------------------------------------------- 102 (167) T d1kao__ 81 VYSLVNQQSFQDIKPMRDQIIR---------------------------------------------------------- 102 (167) T ss_dssp EEETTCHHHHHHHHHHHHHHHH---------------------------------------------------------- T ss_pred EEEEEECCCCCCHHHHHHHHHH---------------------------------------------------------- T ss_conf 9875311232103477899997---------------------------------------------------------- Q ss_pred CCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 7622147994079985075225555420577477899999999999987087378845666356799999998887 Q Ver_Hs_NP_0061 216 DNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 216 eg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) .....++|++||++|+|. .++-.+...-++.|+-.+|+..|.||++...|++-+...|+-.+ T Consensus 103 ---~~~~~~~p~iiv~nK~Dl-----------~~~~~v~~~e~~~~~~~~~~~~~e~Sak~g~~v~~lf~~i~~~~ 164 (167) T d1kao__ 103 ---VKRYEKVPVILVGNKVDL-----------ESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164 (167) T ss_dssp ---HTTTSCCCEEEEEECGGG-----------GGGCCSCHHHHHHHHHHHTSCEEEECTTCHHHHHHHHHHHHHHH T ss_pred ---HCCCCCCEEEEEEEECCC-----------CCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH T ss_conf ---417888638999850354-----------44455798999999996499289997158978889999999972 No 15 >d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1} Probab=98.53 E-value=1.2e-06 Score=59.57 Aligned_columns=159 Identities=26% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEE Q ss_conf 48886078854899999862013367874310335302121347300100588567602113532247734330210200 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI 135 (492) .|+|.|..++|||||+.+|.+.+....+...+..+..+...+..-. +|-+.|..++...-+........ +++ T Consensus 7 ki~iiG~~nvGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~d~~~~~~~~~~~~~~~~~~~~----~~~ 78 (169) T d1upta_ 7 RILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQ----VWDLGGLTSIRPYWRCYYSNTDA----VIY 78 (169) T ss_dssp EEEEECSTTSSHHHHHHHHHHSSCCCCCCCSSEEEEEEEETTEEEE----EEEECCCGGGGGGGGGGCTTCSE----EEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCEEEEEEEECCCEEEE----EEECCCHHHHHHHHHHHHHHHHH----HHH T ss_conf 8999817998799999998578121332121288998623675899----98625412333344443321125----655 Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCC Q ss_conf 02120324799999999999999997248888999999999999986203500057777676645456654000036888 Q Ver_Hs_NP_0061 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLG 215 (492) Q Consensus 136 ~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLg 215 (492) +.|...+..+....+.|..++. T Consensus 79 v~~~~d~~~~~~~~~~~~~~~~---------------------------------------------------------- 100 (169) T d1upta_ 79 VVDSCDRDRIGISKSELVAMLE---------------------------------------------------------- 100 (169) T ss_dssp EEETTCCTTHHHHHHHHHHHHT---------------------------------------------------------- T ss_pred HHHHHCCCCHHHHHHHHHHHHH---------------------------------------------------------- T ss_conf 5544234457889999999873---------------------------------------------------------- Q ss_pred CCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 7622147994079985075225555420577477899999999999987087378845666356799999998887 Q Ver_Hs_NP_0061 216 DNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 216 eg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) ...-..+|++||++|+|. .-+....++.+.....++-.++..+|.||++...+++-+..+|+.++ T Consensus 101 ---~~~~~~~p~iiv~nK~Dl--------~~~~~~~~i~~~~~~~~~~~~~~~~~~~SA~~g~gi~e~~~~l~~~i 165 (169) T d1upta_ 101 ---EEELRKAILVVFANKQDM--------EQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 165 (169) T ss_dssp ---CGGGTTCEEEEEEECTTS--------TTCCCHHHHHHHHTGGGCTTSCEEEEECCTTTCTTHHHHHHHHHHHH T ss_pred ---CCCCCCCCEEEEECCCCC--------CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH T ss_conf ---013355100243201473--------00037889999988888622894699985367988899999999998 No 16 >d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens)} Probab=98.50 E-value=2.1e-07 Score=64.69 Aligned_columns=157 Identities=22% Q ss_pred EEEEECCCCCHHHHHHHHHC---CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEE Q ss_conf 88860788548999998620---133678743103353021213473001005885676021135322477343302102 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQG---AEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLV 133 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~---~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlV 133 (492) |+++|..++|||||+.+|.+ .+.....-|.++....+..+ +....+.+|-..|...+..+.+.....-. .+ T Consensus 6 I~iiG~~~vGKTsll~~~~~~~~~~~~~~T~~~~~~~~~~~~~--~~~~~~~i~D~~g~~~~~~~~~~~~~~~~----~~ 79 (170) T d1i2ma_ 6 LVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN--RGPIKFNVWDTAGQEKFGGLRDGYYIQAQ----CA 79 (170) T ss_dssp EEEEECTTSSHHHHHHTTC-----CCEEEETTEEEEEEEECBT--TCCEEEEEEECTTHHHHSSCGGGGTTTCC----EE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEC--CCEEEEEECCCCCCHHHHHHHHHHCCCCC----EE T ss_conf 9998179987999999986481166623337874567887538--92799997157641012221123205775----79 Q ss_pred EEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCC Q ss_conf 00021203247999999999999999972488889999999999999862035000577776766454566540000368 Q Ver_Hs_NP_0061 134 IFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALP 213 (492) Q Consensus 134 vI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lP 213 (492) +++.|.+.|+.+ +++..|. T Consensus 80 ilv~d~~~~~s~-~~~~~~~------------------------------------------------------------ 98 (170) T d1i2ma_ 80 IIMFDVTSRVTY-KNVPNWH------------------------------------------------------------ 98 (170) T ss_dssp EEEEETTSGGGG-TTHHHHH------------------------------------------------------------ T ss_pred EEEEECCCCCHH-HHHHHHH------------------------------------------------------------ T ss_conf 999705774126-8888876------------------------------------------------------------ Q ss_pred CCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHC Q ss_conf 88762214799407998507522555542057747789999999999998708737884566635679999999888727 Q Ver_Hs_NP_0061 214 LGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG 293 (492) Q Consensus 214 Lgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrlyg 293 (492) .........+|+++|.+|+|.- ++...+|.-.+ |-.++...|-||++...|++-+..+|.-.+++ T Consensus 99 --~~~~~~~~~~piiiVgnK~Dl~-----~~~~~~e~~~~--------~~~~~~~~~e~Sak~~~~i~e~f~~l~~~l~~ 163 (170) T d1i2ma_ 99 --RDLVRVCENIPIVLCGNKVDIK-----DRKVKAKSIVF--------HRKKNLQYYDISAKSNYNFEKPFLWLARKLIG 163 (170) T ss_dssp --HHHHHHHCSCCEEEEEECCCCS-----CSCCTTTSHHH--------HSSCSSEEEEEBTTTTBTTTHHHHHHHHHHHT T ss_pred --HHHHHCCCCEEEEEEEEECCHH-----HHHHHHHHHHH--------HHHCCCCEEEEECCCCCCHHHHHHHHHHHHHC T ss_conf --5443125752789987512202-----32238999999--------98569918999726898988999999999845 Q ss_pred CC Q ss_conf 77 Q Ver_Hs_NP_0061 294 FH 295 (492) Q Consensus 294 fp 295 (492) -| T Consensus 164 ~p 165 (170) T d1i2ma_ 164 DP 165 (170) T ss_dssp CT T ss_pred CC T ss_conf 88 No 17 >d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae)} Probab=98.48 E-value=1.7e-06 Score=58.68 Aligned_columns=164 Identities=23% Q ss_pred EEEEEECCCCCHHHHHHHHHC---CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEE Q ss_conf 488860788548999998620---13367874310335302121347300100588567602113532247734330210 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQG---AEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETL 132 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~---~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~Tl 132 (492) .|+|+|..++|||||+.+|.+ .+......+.++......... ...-....|-..+...+..+.+..+.. -.. T Consensus 4 ki~ivG~~~vGKStLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 78 (175) T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDG-DKVATMQVWDTAGQERFQSLGVAFYRG----ADC 78 (175) T ss_dssp EEEEECCTTSSHHHHHHHHHHSCCCTTC---CCCSCEEEEECCSS-SCCEEEEEECCC----------CCSTT----CCE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECC-CEEEEEEECCCCHHHHHHCCCHHHHHH----HHH T ss_conf 999980799889999999865801345134046424688999848-547999743662023431000013332----230 Q ss_pred EEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCC Q ss_conf 20002120324799999999999999997248888999999999999986203500057777676645456654000036 Q Ver_Hs_NP_0061 133 VIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVAL 212 (492) Q Consensus 133 VvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~l 212 (492) ++++.|.+.+.. ++.++.|..-+..+... T Consensus 79 ~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~-------------------------------------------------- 107 (175) T d1ky3a_ 79 CVLVYDVTNASS-FENIKSWRDEFLVHANV-------------------------------------------------- 107 (175) T ss_dssp EEEEEETTCHHH-HHTHHHHHHHHHHHHCC-------------------------------------------------- T ss_pred EEEEEEECCCCH-HHHHHHHHHHHHHHHHH-------------------------------------------------- T ss_conf 021111014310-67889998889988411-------------------------------------------------- Q ss_pred CCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC-EEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 8887622147994079985075225555420577477899999999999987087-378845666356799999998887 Q Ver_Hs_NP_0061 213 PLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGA-ALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 213 PLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGA-sLiYTS~ke~kNl~lLykYi~Hrl 291 (492) ..+..+|++||++|+|.. ++.-...+.-++.++-.+|. ..+-||++...|++-+...|+-.. T Consensus 108 -------~~~~~~piiiv~nK~Dl~----------~~~~~~~~~~~~~~~~~~~~~~~~e~Sa~~g~gv~~lf~~i~~~~ 170 (175) T d1ky3a_ 108 -------NSPETFPFVILGNKIDAE----------ESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSA 170 (175) T ss_dssp -------SCTTTCCEEEEEECTTSC----------GGGCCSCHHHHHHHHHHTTSCCEEEEBTTTTBSHHHHHHHHHHHH T ss_pred -------CCCCCCEEEEEECCCCCC----------CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH T ss_conf -------035895599984033541----------001432089999999970895089975168977889999999999 Q ss_pred H Q ss_conf 2 Q Ver_Hs_NP_0061 292 Y 292 (492) Q Consensus 292 y 292 (492) + T Consensus 171 ~ 171 (175) T d1ky3a_ 171 L 171 (175) T ss_dssp H T ss_pred H T ss_conf 9 No 18 >d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1} Probab=98.43 E-value=8.1e-07 Score=60.80 Aligned_columns=175 Identities=19% Q ss_pred HHHHHHHHHHHHCCCCCCCCCC-EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCC Q ss_conf 6899999999817862278876-488860788548999998620133678743103353021213473001005885676 Q Ver_Hs_NP_0061 34 SLWSSILSEVSTRARSKLPSGK-NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGD 112 (492) Q Consensus 34 ~lWssil~eV~~~~~~klp~~K-nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~ 112 (492) ||.|.|.+..-+.++ + .|+|+|..++|||||+.+|.+.+........+..+..+.-.+..-. +|-+.|. T Consensus 2 ~~~~~~~~~~~~~~~------~~ki~ivG~~n~GKSSLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~~ 71 (182) T d1moza_ 2 NIFSSMFDKLWGSNK------ELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLN----VWDLGGQ 71 (182) T ss_dssp HHHHHHHGGGTTCSS------CEEEEEEEETTSSHHHHHHHTCCSEEEEECSSTTCCEEEEEETTEEEE----EEEEC-- T ss_pred HHHHHHHHHHCCCCC------EEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCEE----ECCCCCC T ss_conf 158899997437882------279999817998689999987501100111002457898750475212----1046521 Q ss_pred CCCCCCCCCCCCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCC Q ss_conf 02113532247734330210200021203247999999999999999972488889999999999999862035000577 Q Ver_Hs_NP_0061 113 LYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQ 192 (492) Q Consensus 113 ~~~~~LLk~al~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~ 192 (492) ..+..+.+...... ..++++.|.+.+..+.+-.+.|..+.. T Consensus 72 ~~~~~~~~~~~~~~----~~~i~v~d~~~~~~~~~~~~~~~~~~~----------------------------------- 112 (182) T d1moza_ 72 TSIRPYWRCYYADT----AAVIFVVDSTDKDRMSTASKELHLMLQ----------------------------------- 112 (182) T ss_dssp --CCTTGGGTTTTE----EEEEEEEETTCTTTHHHHHHHHHHHTT----------------------------------- T ss_pred HHHHHHHHHHHHCC----CEEEEEEEECCCCCHHHHHHHHHHHHH----------------------------------- T ss_conf 12345556541023----235789860345677789999999987----------------------------------- Q ss_pred CCCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE Q ss_conf 77676645456654000036888762214799407998507522555542057747789999999999998708737884 Q Ver_Hs_NP_0061 193 GSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYT 272 (492) Q Consensus 193 gs~~r~~~~~s~~de~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYT 272 (492) .....++|+++|++|+|. .-.....+..++.-...+-..+-..|.| T Consensus 113 --------------------------~~~~~~~p~iiv~nK~Dl--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (182) T d1moza_ 113 --------------------------EEELQDAALLVFANKQDQ--------PGALSASEVSKELNLVELKDRSWSIVAS 158 (182) T ss_dssp --------------------------SSTTSSCEEEEEEECTTS--------TTCCCHHHHHHHTTTTTCCSSCEEEEEE T ss_pred --------------------------HHHCCCCCEEEEEECCCC--------CCCCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf --------------------------530168634899852587--------3214656789998777540279369998 Q ss_pred CCCCCCCHHHHHHHHHHHH Q ss_conf 5666356799999998887 Q Ver_Hs_NP_0061 273 SVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 273 S~ke~kNl~lLykYi~Hrl 291 (492) |++...+++-++.+|+..+ T Consensus 159 Sa~~g~gi~e~~~~l~~~i 177 (182) T d1moza_ 159 SAIKGEGITEGLDWLIDVI 177 (182) T ss_dssp BGGGTBTHHHHHHHHHHHH T ss_pred ECCCCCCHHHHHHHHHHHH T ss_conf 5357988899999999997 No 19 >d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2} Probab=98.43 E-value=2.4e-06 Score=57.65 Aligned_columns=159 Identities=19% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEE Q ss_conf 48886078854899999862013367874310335302121347300100588567602113532247734330210200 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI 135 (492) +|+|+|..++|||||+.+|.+.+...-+.-.++.+..+ .-+..++.+|-+.|...+..+.+..+..- -.+++ T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~~~~~~~~t~~~~~~~i----~~~~~~~~l~D~~G~~~~~~~~~~~~~~~----d~ii~ 75 (165) T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTL----EHRGFKLNIWDVGGQKSLRSYWRNYFEST----DGLIW 75 (165) T ss_dssp EEEEECSTTSSHHHHHHHHTTCCCSSCCCCSSEEEEEE----EETTEEEEEEEECCSHHHHTTGGGGCTTC----SEEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEEEEE----CCCEEEEEEECCCCCHHHHHHHHHHHCCC----CHHHH T ss_conf 89998179998999999983782046655787556530----58358999840675102233578873222----03223 Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCC Q ss_conf 02120324799999999999999997248888999999999999986203500057777676645456654000036888 Q Ver_Hs_NP_0061 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLG 215 (492) Q Consensus 136 ~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLg 215 (492) |+|.+.|+.+.+-.+.|..++. T Consensus 76 v~d~~~~~~~~~~~~~l~~~~~---------------------------------------------------------- 97 (165) T d1ksha_ 76 VVDSADRQRMQDCQRELQSLLV---------------------------------------------------------- 97 (165) T ss_dssp EEETTCGGGHHHHHHHHHHHHT---------------------------------------------------------- T ss_pred HHHHHCCCCHHHHHHHHHHHHH---------------------------------------------------------- T ss_conf 2231056888899999999985---------------------------------------------------------- Q ss_pred CCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC-CCEEEEECCCCCCCHHHHHHHHHHHHH Q ss_conf 76221479940799850752255554205774778999999999999870-873788456663567999999988872 Q Ver_Hs_NP_0061 216 DNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQY-GAALIYTSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 216 eg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~Y-GAsLiYTS~ke~kNl~lLykYi~Hrly 292 (492) + ...-++|++||++|+|. -.....+-|.+.+---.++. +..++.||++...+++-+..+|+-++. T Consensus 98 ~---~~~~~~piiiv~nK~Dl---------~~~~~~~~i~~~l~~~~i~~~~~~~~~~Sa~tg~Gi~e~~~~l~~~i~ 163 (165) T d1ksha_ 98 E---ERLAGATLLIFANKQDL---------PGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDIS 163 (165) T ss_dssp C---GGGTTCEEEEEEECTTS---------TTCCCHHHHHHHTTGGGCCSSCEEEEECCTTTCTTHHHHHHHHHHHHH T ss_pred H---HHHCCCEEEEEEECCCC---------CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHH T ss_conf 5---53079608999874688---------654788899999888851458817999862579888999999999973 No 20 >d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima} Probab=98.37 E-value=4.2e-06 Score=56.09 Aligned_columns=170 Identities=24% Q ss_pred CCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC Q ss_conf 86227887648886078854899999862013367874310335302121347300100588567602113532247734 Q Ver_Hs_NP_0061 47 ARSKLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAE 126 (492) Q Consensus 47 ~~~klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~ 126 (492) |..++...=+|.|+|..++|||||+.+|-+.+...-+.-.+.+--.......-+..++.+|-..|--....+.+...... T Consensus 1 s~p~~~~~ikI~iiG~~~~GKSTLin~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~Dt~G~~~~~~~~~~~~~~~ 80 (186) T d1mkya2 1 SKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAGLRRKSRVEPRTVEKY 80 (186) T ss_dssp SCCCCCSCEEEEEECSTTSSHHHHHHHHHTSTTEEECCC------CCCEEEEETTEEEEESSCSCC-----------CCS T ss_pred CCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEECCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHH T ss_conf 98754367379998349998889999984442213105523455541010111112247841687410010112234345 Q ss_pred CHHH--------EEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCC Q ss_conf 3302--------10200021203247999999999999999972488889999999999999862035000577776766 Q Ver_Hs_NP_0061 127 SLPE--------TLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRR 198 (492) Q Consensus 127 si~~--------TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~ 198 (492) .... -++++++|-++++. ++...|+..++. T Consensus 81 ~~~~~~~~~~~~div~~vid~~~~~~--~~~~~~~~~~~~---------------------------------------- 118 (186) T d1mkya2 81 SNYRVVDSIEKADVVVIVLDATQGIT--RQDQRMAGLMER---------------------------------------- 118 (186) T ss_dssp CCHHHHHHHHHCSEEEEEEETTTCCC--HHHHHHHHHHHH---------------------------------------- T ss_pred HHHHHHHHHHHHCCCCEEECCCCCCH--HHHHHHHHHHHH---------------------------------------- T ss_conf 55555566543024202321667720--457999998775---------------------------------------- Q ss_pred CCCCCCCCCHHCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC-CEEEEECCCCC Q ss_conf 45456654000036888762214799407998507522555542057747789999999999998708-73788456663 Q Ver_Hs_NP_0061 199 GPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYG-AALIYTSVKEE 277 (492) Q Consensus 199 ~~~~s~~de~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YG-AsLiYTS~ke~ 277 (492) .+.|+++|++|+|.+ ..+++.++-+...++...-+.+ ..+|++|++.. T Consensus 119 ------------------------~~~p~iiv~NK~Dli-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~SA~tg 167 (186) T d1mkya2 119 ------------------------RGRASVVVFNKWDLV-------VHREKRYDEFTKLFREKLYFIDYSPLIFTSADKG 167 (186) T ss_dssp ------------------------TTCEEEEEEECGGGS-------TTGGGCHHHHHHHHHHHCGGGTTSCEEECBTTTT T ss_pred ------------------------HHHHHHHHCCCCCCC-------CCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC T ss_conf ------------------------000122212310133-------4303479999999998852148986799734679 Q ss_pred CCHHHHHHHHHH Q ss_conf 567999999988 Q Ver_Hs_NP_0061 278 KNLDLLYKYIVH 289 (492) Q Consensus 278 kNl~lLykYi~H 289 (492) .|++-|..+|.+ T Consensus 168 ~gi~~l~~~i~~ 179 (186) T d1mkya2 168 WNIDRMIDAMNL 179 (186) T ss_dssp BSHHHHHHHHHH T ss_pred CCHHHHHHHHHH T ss_conf 888899999999 No 21 >d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6} Probab=98.36 E-value=6.2e-06 Score=55.02 Aligned_columns=155 Identities=18% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEE Q ss_conf 48886078854899999862013367874310335302121347300100588567602113532247734330210200 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI 135 (492) .|+|+|..++|||||+.++...+......-.++.+..+...+ .++.+|-+.|...+..+.+..+.--. .+|+ T Consensus 14 ki~iiG~~~vGKSsll~~~~~~~~~~~~~t~~~~~~~i~~~~----~~~~l~D~~g~~~~~~~~~~~~~~~d----~ii~ 85 (173) T d1e0sa_ 14 RILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKN----VKFNVWDVGGQDKIRPLWRHYYTGTQ----GLIF 85 (173) T ss_dssp EEEEEEETTSSHHHHHHHTTCCCCEEEEEETTEEEEEEEETT----EEEEEEEESCCGGGHHHHGGGTTTCC----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCEECCEEEEEEEEEEEE----EEEEEEECCCCHHHHHHHHHHCCCCC----EEEE T ss_conf 899981799879999999853854302202048999840036----99998644741156889998505886----8999 Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCC Q ss_conf 02120324799999999999999997248888999999999999986203500057777676645456654000036888 Q Ver_Hs_NP_0061 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLG 215 (492) Q Consensus 136 ~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLg 215 (492) +.|.+.|.. ++++..|+.-+. T Consensus 86 v~d~~~~~s-~~~~~~~l~~i~---------------------------------------------------------- 106 (173) T d1e0sa_ 86 VVDCADRDR-IDEARQELHRII---------------------------------------------------------- 106 (173) T ss_dssp EEETTCGGG-HHHHHHHHHHHH---------------------------------------------------------- T ss_pred EEECCCCCC-HHHHHHHHHHHH---------------------------------------------------------- T ss_conf 997388313-789999999998---------------------------------------------------------- Q ss_pred CCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC----CCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 76221479940799850752255554205774778999999999999870----87378845666356799999998887 Q Ver_Hs_NP_0061 216 DNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQY----GAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 216 eg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~Y----GAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) -....-++|++||++|+|. ...-..++ ..+.+.+.. +..++.||++...+++-+..+|.-++ T Consensus 107 --~~~~~~~~piiiv~NK~Dl------~~~~~~~e------~~~~l~l~~~~~~~~~~~~~SA~tgeGi~e~~~~l~~~~ 172 (173) T d1e0sa_ 107 --NDREMRDAIILIFANKQDL------PDAMKPHE------IQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNY 172 (173) T ss_dssp --TSGGGTTCEEEEEEECTTS------TTCCCHHH------HHHHTTGGGCCSSCEEEEECBTTTTBTHHHHHHHHHHHC T ss_pred --HHHCCCCCEEEEEEECCCC------CCCCCHHH------HHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHC T ss_conf --6413798548998640587------65679999------999988875145873799975256998899999999845 No 22 >d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus)} Probab=98.33 E-value=1.2e-05 Score=53.22 Aligned_columns=168 Identities=13% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEE Q ss_conf 48886078854899999862013367874310335302121347300100588567602113532247734330210200 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI 135 (492) .|++||+.++|||||+.++.....+.-+-.-.-.-. +.-++.+|=+.|...+..+.+..+.- -..+|+ T Consensus 4 ki~~lG~~~vGKTsll~~~~~~~~~~~~~~~~~~~~--------~~~~l~i~D~~G~~~~~~~~~~~~~~----~~~~i~ 71 (195) T d1svsa1 4 KLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTF--------KDLHFKMFDVGGQRSERKKWIHCFEG----VTAIIF 71 (195) T ss_dssp EEEEECSTTSSHHHHHHHHHHHHSCCCSEEEEEEEE--------TTEEEEEEEECCSGGGGGGGGGGCTT----CSEEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEEEE--------EEEEEEEEECCCCHHHHHHHHHHHCC----CCEEEE T ss_conf 899982499867787654315841242179999986--------47999998647751577777865069----975899 Q ss_pred HHHHCCHHH------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHH Q ss_conf 021203247------99999999999999997248888999999999999986203500057777676645456654000 Q Ver_Hs_NP_0061 136 VADMSRPWT------VMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEEN 209 (492) Q Consensus 136 ~lD~s~PW~------~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~ 209 (492) |.|.+..=. |+.+|..|...++..+.. T Consensus 72 V~Disd~~s~~~~~~~~~~l~~~~~~~~~i~~~----------------------------------------------- 104 (195) T d1svsa1 72 CVALSDYDLVLAEDEEMNRMHESMKLFDSICNN----------------------------------------------- 104 (195) T ss_dssp EEEGGGGGCBCSSCTTSBHHHHHHHHHHHHHTC----------------------------------------------- T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC----------------------------------------------- T ss_conf 986586023466664456799999999997414----------------------------------------------- Q ss_pred CCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCC--------CCHHHHHHHHHHHHHHHHHCCCE-------EEEECC Q ss_conf 036888762214799407998507522555542057--------74778999999999999870873-------788456 Q Ver_Hs_NP_0061 210 VALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHD--------YRDEHLDFIQSHLRRFCLQYGAA-------LIYTSV 274 (492) Q Consensus 210 v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~--------y~dE~fD~Iqq~LR~~cL~YGAs-------LiYTS~ 274 (492) ...-.+|++||++|+|..+.-.+.-. -....++-...+++.-......+ .+|||+ T Consensus 105 ----------~~~~~~piilv~NK~Dl~~~k~~~~~~~~~~~~~~~~~~~e~~~~~i~~~f~~~~~~~~~k~~~~~~tSA 174 (195) T d1svsa1 105 ----------KWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCA 174 (195) T ss_dssp ----------GGGTTSEEEEEEECHHHHHHHTTTSCGGGTCTTCCSCSSHHHHHHHHHHHHHTTCSCTTTCCEEEEECCT T ss_pred ----------CCCCCCEEEEEECCCCHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC T ss_conf ----------5778966999833862032245345312302234777678999999999999863277776156788640 Q ss_pred CCCCCHHHHHHHHHHHHH Q ss_conf 663567999999988872 Q Ver_Hs_NP_0061 275 KEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 275 ke~kNl~lLykYi~Hrly 292 (492) +...|++.+.+++...+. T Consensus 175 k~~~NI~~vF~~v~d~Ii 192 (195) T d1svsa1 175 TDTKNVQFVFDAVTDVII 192 (195) T ss_dssp TCHHHHHHHHHHHHHHHH T ss_pred CCCHHHHHHHHHHHHHHH T ss_conf 125789999999999975 No 23 >d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus} Probab=98.27 E-value=7e-07 Score=61.19 Aligned_columns=173 Identities=22% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH Q ss_conf 27887648886078854899999862013367874310335302121347300100588567602113532247734330 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLP 129 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~ 129 (492) |..||+ |.++|..++|||||+.+|-+.+...-+...+-+---..-.......+..+|=.-|=..........+..+... T Consensus 2 ~~~~~~-I~ivG~~n~GKSTLin~l~~~~~~~~~~~~~tT~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~ 80 (178) T d1wf3a1 2 KTYSGF-VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFMDQEVYE 80 (178) T ss_dssp CCEEEE-EEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSCEEEEEEETTEEEEEEECCCCCCCCSHHHHHHHHHHHH T ss_pred CEECCE-EEEEECCCCCHHHHHHHHHCCCCCEECCCCCEEEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCC T ss_conf 200436-8998349987899999984551100015551467654320003762158854631100012344543200001 Q ss_pred H----EEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCC Q ss_conf 2----102000212032479999999999999999724888899999999999998620350005777767664545665 Q Ver_Hs_NP_0061 130 E----TLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGS 205 (492) Q Consensus 130 ~----TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~ 205 (492) . -+|++++|.+.+ +.++...|...+++.. T Consensus 81 ~i~~~d~ii~viD~~~~--~~~~~~~~~~~l~~~~--------------------------------------------- 113 (178) T d1wf3a1 81 ALADVNAVVWVVDLRHP--PTPEDELVARALKPLV--------------------------------------------- 113 (178) T ss_dssp HTSSCSEEEEEEETTSC--CCHHHHHHHHHHGGGT--------------------------------------------- T ss_pred HHHHCCEEEEECCCCCC--CCHHHHHHHHHHHHHH--------------------------------------------- T ss_conf 01012213552145566--4456788999999862--------------------------------------------- Q ss_pred CCHHCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHH Q ss_conf 40000368887622147994079985075225555420577477899999999999987087378845666356799999 Q Ver_Hs_NP_0061 206 DEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYK 285 (492) Q Consensus 206 de~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLyk 285 (492) ...|++||.+|+|.+ +..++..+.+++.+ --+..+++|++...|++-|.. T Consensus 114 -----------------~~~piiiv~NK~Dl~-------~~~~~~~~~~~~~~------~~~~~~~vSa~~~~gi~~L~~ 163 (178) T d1wf3a1 114 -----------------GKVPILLVGNKLDAA-------KYPEEAMKAYHELL------PEAEPRMLSALDERQVAELKA 163 (178) T ss_dssp -----------------TTSCEEEEEECGGGC-------SSHHHHHHHHHHTS------TTSEEEECCTTCHHHHHHHHH T ss_pred -----------------CCCCCEEECCCCCCC-------CCHHHHHHHHHHHC------CCCCEEEEECCCCCCHHHHHH T ss_conf -----------------036421100566765-------68578999999842------899779985147878889999 Q ss_pred HHHHHHHCCCCCCCC Q ss_conf 998887277767655 Q Ver_Hs_NP_0061 286 YIVHKTYGFHFTTPA 300 (492) Q Consensus 286 Yi~Hrlygfpf~~ka 300 (492) +|...+---|+-.|. T Consensus 164 ~i~~~lpe~p~~~p~ 178 (178) T d1wf3a1 164 DLLALMPEGPFFYPE 178 (178) T ss_dssp HHHTTCCBCCCSSCT T ss_pred HHHHHCCCCCCCCCC T ss_conf 999967788898899 No 24 >d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae)} Probab=98.25 E-value=1.9e-05 Score=51.86 Aligned_columns=162 Identities=20% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCC-CCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEE Q ss_conf 4888607885489999986201336787431033530212134730-010058856760211353224773433021020 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDH-TRCNVWILDGDLYHKGLLKFAVSAESLPETLVI 134 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~-~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVv 134 (492) .|+++|..++|||||+.+|.+..-..........-.....-.-+.. -++.+|-..|.-....+.+..... -..++ T Consensus 5 ki~ivG~~~vGKSsLi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~----~~~~i 80 (170) T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRN----AQAAL 80 (170) T ss_dssp EEEEECSTTSSHHHHHHHHHHSCCCTTCCCCSSEEEEEEEEEETTEEEEEEEEEECCSGGGGGGHHHHHTT----CSEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHH----CCEEE T ss_conf 89998079988999999986681012413433136656766654702799862376514555555777741----20457 Q ss_pred EHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCC Q ss_conf 00212032479999999999999999724888899999999999998620350005777767664545665400003688 Q Ver_Hs_NP_0061 135 FVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPL 214 (492) Q Consensus 135 I~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPL 214 (492) ++.|.+.+ .-.+++..|...+...... T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------------------------------------------------- 107 (170) T d1ek0a_ 81 VVYDVTKP-QSFIKARHWVKELHEQASK---------------------------------------------------- 107 (170) T ss_dssp EEEETTCH-HHHHHHHHHHHHHHHHSCT---------------------------------------------------- T ss_pred EEEEECCC-CCHHHHHHHHHHHHHHHHC---------------------------------------------------- T ss_conf 77641122-3367899998887532102---------------------------------------------------- Q ss_pred CCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 87622147994079985075225555420577477899999999999987087378845666356799999998887 Q Ver_Hs_NP_0061 215 GDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 215 geg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) ..|+++|++|+|....-....-..++ .+.+|-..++..+.||++...|++-+...|..++ T Consensus 108 ---------~~~~iiv~nK~Dl~~~~~~~~i~~~~--------~~~~~~~~~~~~~~~Sa~~g~gI~elf~~i~~~i 167 (170) T d1ek0a_ 108 ---------DIIIALVGNKIDMLQEGGERKVAREE--------GEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 167 (170) T ss_dssp ---------TCEEEEEEECGGGGGSSCCCCSCHHH--------HHHHHHHHTCEEEECCTTTCTTHHHHHHHHHTTS T ss_pred ---------CCCCEEEECCHHHHHHCCCCCHHHHH--------HHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHC T ss_conf ---------43110100000012210112200899--------9999996498499986268878889999999856 No 25 >d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus} Probab=98.25 E-value=1.8e-05 Score=52.04 Aligned_columns=171 Identities=20% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECC----CCCCCCCCCCCCCCCCHHHE Q ss_conf 48886078854899999862013367874310335302121347300100588567----60211353224773433021 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDG----DLYHKGLLKFAVSAESLPET 131 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg----~~~~~~LLk~al~~~si~~T 131 (492) +|-++|..++|||||+.+|-+....-......-.-..++.-..++..++.+|-..| ......+.......-.-.+. T Consensus 3 ~I~iiG~~~~GKSSLi~~L~~~~~~~~~~~~~t~~~~~~~~~~~~~~~i~l~D~pG~~~~~~~~~~~~~~~~~~~~~~d~ 82 (180) T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRV 82 (180) T ss_dssp SEEEECCGGGCHHHHHHHHCSSCCEECCCTTCSSCCEEEEEECSSSCEEEEEECCCCCCCGGGSCCSCHHHHHHHTSSSE T ss_pred CEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH T ss_conf 14887459986899999985684013203676125788899742884036732675445653100112222101233345 Q ss_pred EEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCC Q ss_conf 02000212032479999999999999999724888899999999999998620350005777767664545665400003 Q Ver_Hs_NP_0061 132 LVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVA 211 (492) Q Consensus 132 lVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~ 211 (492) ++.++-.=.+|+...+.+.+|+........+. T Consensus 83 i~~v~d~~~~~~~~~~~~~~~l~~~~~~~~~~------------------------------------------------ 114 (180) T d1udxa2 83 LLYVLDAADEPLKTLETLRKEVGAYDPALLRR------------------------------------------------ 114 (180) T ss_dssp EEEEEETTSCHHHHHHHHHHHHHHHCHHHHHS------------------------------------------------ T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH------------------------------------------------ T ss_conf 44320013430478999999987544553210------------------------------------------------ Q ss_pred CCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 68887622147994079985075225555420577477899999999999987087378845666356799999998887 Q Ver_Hs_NP_0061 212 LPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 212 lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) |+++|++|+|.++ +-....++..+-+-+...|+||++...+++.|.++|.+.+ T Consensus 115 --------------p~iiv~NK~Dl~~-------------~~~~~~~~~~~~~~~~~v~~iSa~tg~Gi~eL~e~l~~~i 167 (180) T d1udxa2 115 --------------PSLVALNKVDLLE-------------EEAVKALADALAREGLAVLPVSALTGAGLPALKEALHALV 167 (180) T ss_dssp --------------CEEEEEECCTTSC-------------HHHHHHHHHHHHTTTSCEEECCTTTCTTHHHHHHHHHHHH T ss_pred --------------CCHHHHCCCCCCC-------------HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH T ss_conf --------------0001202456667-------------4458999999973589789983466888789999999998 Q ss_pred HCCCCCCCCE Q ss_conf 2777676550 Q Ver_Hs_NP_0061 292 YGFHFTTPAL 301 (492) Q Consensus 292 ygfpf~~ka~ 301 (492) =..|-..... T Consensus 168 ~~~~~~~~~~ 177 (180) T d1udxa2 168 RSTPPPEMPK 177 (180) T ss_dssp HTSCCCCCCC T ss_pred HHCCCCCCCC T ss_conf 6268888888 No 26 >d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)} Probab=98.25 E-value=1.6e-05 Score=52.34 Aligned_columns=158 Identities=18% Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEH Q ss_conf 88860788548999998620133678743103353021213473001005885676021135322477343302102000 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFV 136 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI~ 136 (492) |+++|..++|||||+.+|.+.+-........-......-.......+..+|...|...+....+.....-.. ++++ T Consensus 6 i~lvG~~nvGKSsLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~g~~~~~~~~~~~~~~~~~----~~~~ 81 (166) T d1ctqa_ 6 LVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEG----FLCV 81 (166) T ss_dssp EEEEESTTSSHHHHHHHHHHCCCCCSCCCCSEEEEEEEEEETTEEEEEEEEEECCCGGGHHHHHHHHHHCSE----EEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHH----HHHH T ss_conf 999817998799999998648113342455533679999981037788875135620001222101000133----2222 Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCC Q ss_conf 21203247999999999999999972488889999999999999862035000577776766454566540000368887 Q Ver_Hs_NP_0061 137 ADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLGD 216 (492) Q Consensus 137 lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLge 216 (492) .|.+.+..+-.....|....+ T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------------- 102 (166) T d1ctqa_ 82 FAINNTKSFEDIHQYREQIKR----------------------------------------------------------- 102 (166) T ss_dssp EETTCHHHHHTHHHHHHHHHH----------------------------------------------------------- T ss_pred HHHCCCHHHHHHHHHHHHHHH----------------------------------------------------------- T ss_conf 211010000001356655542----------------------------------------------------------- Q ss_pred CCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 622147994079985075225555420577477899999999999987087378845666356799999998887 Q Ver_Hs_NP_0061 217 NVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 217 g~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) .......|+++|++|+|.. ++.-..++ ++.|+-++|+..+.||++...|++-+..++++.+ T Consensus 103 --~~~~~~~~iiiv~nK~Dl~-----~~~~~~~~-------~~~~~~~~~~~~~e~Sak~g~gi~e~f~~l~~~i 163 (166) T d1ctqa_ 103 --VKDSDDVPMVLVGNKCDLA-----ARTVESRQ-------AQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 163 (166) T ss_dssp --HHTCSSCCEEEEEECTTCS-----CCCSCHHH-------HHHHHHHHTCCEEECCTTTCTTHHHHHHHHHHHH T ss_pred --CCCCCCCEEEEEECCCCHH-----HCCCCHHH-------HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHH T ss_conf --0134782699970224633-----50567899-------9999996399189986268988889999999998 No 27 >d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1} Probab=98.18 E-value=5.1e-06 Score=55.53 Aligned_columns=159 Identities=22% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEE Q ss_conf 48886078854899999862013367874310335302121347300100588567602113532247734330210200 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI 135 (492) .|+|+|..++|||||+.+|.+.+......-.++.+..+...+ .++.+|-..|...+..+.+..+.... .+++ T Consensus 2 ki~iiG~~~~GKSsLi~~l~~~~~~~~~~t~~~~~~~i~~~~----~~~~~~D~~g~~~~~~~~~~~~~~~~----~ii~ 73 (160) T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN----ISFTVWDVGGQDKIRPLWRHYFQNTQ----GLIF 73 (160) T ss_dssp EEEEECSTTSSHHHHHHHHHHHCSSCCCCCSSCCEEEEECSS----CEEEEEECCCCGGGHHHHHHHTTTCS----EEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEE----EEEEEECCCCCCCHHHHHHHHHCCCC----EEEE T ss_conf 789980799989999999846820222200158999997347----89987036644201122354403781----8999 Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCC Q ss_conf 02120324799999999999999997248888999999999999986203500057777676645456654000036888 Q Ver_Hs_NP_0061 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLG 215 (492) Q Consensus 136 ~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLg 215 (492) +.|.+.+..+.+..+.|..+++..-.+ T Consensus 74 v~d~~~~~s~~~~~~~~~~~~~~~~~~----------------------------------------------------- 100 (160) T d1r8sa_ 74 VVDSNDRERVNEAREELMRMLAEDELR----------------------------------------------------- 100 (160) T ss_dssp EEETTCGGGHHHHHHHHHHHHTCGGGT----------------------------------------------------- T ss_pred EEECCCCHHHHHHHHHHHHHHHHHCCC----------------------------------------------------- T ss_conf 971456202688999999998523027----------------------------------------------------- Q ss_pred CCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 7622147994079985075225555420577477899999999999987087378845666356799999998887 Q Ver_Hs_NP_0061 216 DNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 216 eg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) ++|+++|.+|+|. .-....-++.+..-....-.....++.||++...+++=....|.+.+ T Consensus 101 --------~~piiiv~NK~Dl--------~~~~~~~e~~~~l~~~~~~~~~~~~~~~SA~~g~Gi~e~~~~l~~~~ 160 (160) T d1r8sa_ 101 --------DAVLLVFANKQDL--------PNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160 (160) T ss_dssp --------TCEEEEEEECTTS--------TTCCCHHHHHHHTTGGGCSSCCEEEEECBTTTTBTHHHHHHHHHHHC T ss_pred --------CCEEEEEEECCCC--------CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHC T ss_conf --------8616899863588--------53246788999988874144881799986357998899999999719 No 28 >d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3} Probab=98.14 E-value=1.9e-06 Score=58.33 Aligned_columns=158 Identities=21% Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEH Q ss_conf 88860788548999998620133678743103353021213473001005885676021135322477343302102000 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFV 136 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI~ 136 (492) |+|+|..++|||||+.+|.+.+......-+++.+..+.... .++.+|-..|.-.+..+.+..+..-. .++++ T Consensus 19 i~ivG~~~~GKTsli~~l~~~~~~~~~~t~~~~~~~i~~~~----~~~~i~d~~G~~~~~~~~~~~~~~~~----~~ilv 90 (176) T d1fzqa_ 19 ILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQG----FKLNVWDIGGQRKIRPYWRSYFENTD----ILIYV 90 (176) T ss_dssp EEEEESTTSSHHHHHHHHCCSCCEEEEEETTEEEEEEEETT----EEEEEEECSSCGGGHHHHHHHHTTCS----EEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEEECEE----EEEEECCCCCHHHHHHHHHHHHCCCC----EEEEE T ss_conf 99980799978999999845764310234788875431104----52100357401356788888521686----48999 Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCC Q ss_conf 21203247999999999999999972488889999999999999862035000577776766454566540000368887 Q Ver_Hs_NP_0061 137 ADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLGD 216 (492) Q Consensus 137 lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLge 216 (492) .|.+.++.|-+....|.+++...... T Consensus 91 ~d~~~~~s~~~~~~~~~~~l~~~~~~------------------------------------------------------ 116 (176) T d1fzqa_ 91 IDSADRKRFEETGQELTELLEEEKLS------------------------------------------------------ 116 (176) T ss_dssp EETTCGGGHHHHHHHHHHHTTCGGGT------------------------------------------------------ T ss_pred EECCCCCCHHHHHHHHHHHHHCCCCC------------------------------------------------------ T ss_conf 82567566788999999997323557------------------------------------------------------ Q ss_pred CCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 622147994079985075225555420577477899999999999987087378845666356799999998887 Q Ver_Hs_NP_0061 217 NVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 217 g~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) ++|++||++|+|.. .....-.+.+..-...+-..+..++.||++...|++=+..+|.-++ T Consensus 117 -------~~piiiv~nK~Dl~--------~~~~~~ei~~~l~~~~~~~~~~~i~~~Sa~tg~gi~e~~~~i~~~i 176 (176) T d1fzqa_ 117 -------CVPVLIFANKQDLL--------TAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 176 (176) T ss_dssp -------TCCEEEEEECTTST--------TCCCHHHHHHHTTGGGCCSSCEEEEECCTTTCTTHHHHHHHHHHTC T ss_pred -------CEEEEEEEECCCCC--------CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHC T ss_conf -------50589998225886--------5478889999963665411782699985356988899999999609 No 29 >d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus)} Probab=98.08 E-value=7e-05 Score=48.10 Aligned_columns=164 Identities=20% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCC-CCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEE Q ss_conf 48886078854899999862013367874-31033530212134730010058856760211353224773433021020 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVI 134 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~-gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVv 134 (492) .|+++|..++|||||+.+|.+.+-..... +.+..+....=.......+...|...+.-............ ...++ T Consensus 4 ki~ivG~~nvGKSsLl~~l~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~i 79 (184) T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRG----ADCCV 79 (184) T ss_dssp EEEEECCTTSSHHHHHHHHHHSCCCSSCCCCCSEEEEEEEEESSSCEEEEEEEEECSSGGGSCSCCGGGTT----CSEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHH----HHHHH T ss_conf 89998079987999999986680134535651258899999863532125650575202455678888665----44433 Q ss_pred EHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCC Q ss_conf 00212032479999999999999999724888899999999999998620350005777767664545665400003688 Q Ver_Hs_NP_0061 135 FVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPL 214 (492) Q Consensus 135 I~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPL 214 (492) ++.|...+ .....+..|..-+..++.... T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------- 108 (184) T d1vg8a_ 80 LVFDVTAP-NTFKTLDSWRDEFLIQASPRD-------------------------------------------------- 108 (184) T ss_dssp EEEETTCH-HHHHTHHHHHHHHHHHHCCSS-------------------------------------------------- T ss_pred HHHHHCCC-CCHHHHHHHHHHHHHHHHCCC-------------------------------------------------- T ss_conf 21110254-305678888899998730134-------------------------------------------------- Q ss_pred CCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH Q ss_conf 876221479940799850752255554205774778999999999999870873788456663567999999988872 Q Ver_Hs_NP_0061 215 GDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 215 geg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrly 292 (492) .-.+|+++|.+|+|. ++.-...+...+.+.=..+...+.||++...|++-+..-|.-..+ T Consensus 109 -------~~~~piiiv~nK~Dl-----------~~~~~~~~~~~~~~~~~~~~~~~~~Sak~g~gi~e~f~~i~~~~l 168 (184) T d1vg8a_ 109 -------PENFPFVVLGNKIDL-----------ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 168 (184) T ss_dssp -------GGGSCEEEEEECTTS-----------SCCCSCHHHHHHHHHHTTSCCEEECBTTTTBSHHHHHHHHHHHHH T ss_pred -------CCCCCEEEECCCCCC-----------CHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH T ss_conf -------477537898256452-----------000011489999999844982899852789888899999999997 No 30 >d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima} Probab=98.06 E-value=1.4e-05 Score=52.77 Aligned_columns=157 Identities=24% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEE-CCCCCCCCCCCCCCCCCCHHH---- Q ss_conf 488860788548999998620133678743103353021213473001005885-676021135322477343302---- Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWIL-DGDLYHKGLLKFAVSAESLPE---- 130 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiL-dg~~~~~~LLk~al~~~si~~---- 130 (492) +|.|+|..++|||||+.+|-+.+...-+..-+.+.--....-..+..++.+|-. .........+........... T Consensus 2 ~I~iiG~~~~GKSSLin~l~~~~~~~v~~~~~~t~~~~~~~~~~~~~~~~~~Dt~g~~~~~~~~~~~~~~~~~~~~~~~a 81 (171) T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNPQDIISQKMKEVTLNMIREA 81 (171) T ss_dssp EEEEECCTTSSHHHHHHHHHC--------------CCSEEEEEETTEEEEEEECTTTTSSGGGCCCHHHHHHHHHHHTTC T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHC T ss_conf 58898259997899999984665303204563578876410112333034321244010000013456665544432102 Q ss_pred EEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHC Q ss_conf 10200021203247999999999999999972488889999999999999862035000577776766454566540000 Q Ver_Hs_NP_0061 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENV 210 (492) Q Consensus 131 TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v 210 (492) -++++++|-+++|. .+-..|+..++ T Consensus 82 d~ii~vid~~~~~~--~~~~~~~~~l~----------------------------------------------------- 106 (171) T d1mkya1 82 DLVLFVVDGKRGIT--KEDESLADFLR----------------------------------------------------- 106 (171) T ss_dssp SEEEEEEETTTCCC--HHHHHHHHHHH----------------------------------------------------- T ss_pred CCCEEEECCCCCCC--HHHHHHHHHHH----------------------------------------------------- T ss_conf 23035422556642--57889987643----------------------------------------------------- Q ss_pred CCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH Q ss_conf 36888762214799407998507522555542057747789999999999998708737884566635679999999888 Q Ver_Hs_NP_0061 211 ALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHK 290 (492) Q Consensus 211 ~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hr 290 (492) ..+.|+++|++|+|.+...++ +.+..+.-..-...|++|+++..|++-|.+.|+-+ T Consensus 107 -----------~~~~~ii~v~NK~D~~~~~~~-------------~~~~~~~~~~~~~~~~vSA~~g~gi~~L~~~i~~~ 162 (171) T d1mkya1 107 -----------KSTVDTILVANKAENLREFER-------------EVKPELYSLGFGEPIPVSAEHNINLDTMLETIIKK 162 (171) T ss_dssp -----------HHTCCEEEEEESCCSHHHHHH-------------HTHHHHGGGSSCSCEECBTTTTBSHHHHHHHHHHH T ss_pred -----------CCCCCEEEEEECCCCCCHHHH-------------HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH T ss_conf -----------179977999872444322478-------------99999995689977998514688889999999986 Q ss_pred H Q ss_conf 7 Q Ver_Hs_NP_0061 291 T 291 (492) Q Consensus 291 l 291 (492) + T Consensus 163 l 163 (171) T d1mkya1 163 L 163 (171) T ss_dssp H T ss_pred H T ss_conf 0 No 31 >d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis} Probab=98.01 E-value=5.9e-06 Score=55.16 Aligned_columns=161 Identities=20% Q ss_pred EEEEEECCCCCHHHHHHHHHC------CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH Q ss_conf 488860788548999998620------13367874310335302121347300100588567602113532247734330 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQG------AEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLP 129 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~------~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~ 129 (492) ||.|+|..++|||||+.+|.+ .+.....+-.+.+.-...-.-.....++.+|=.-|-..+.......+..-. T Consensus 7 ~I~iiG~~naGKSTLin~L~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~i~iiDtpG~~~~~~~~~~~~~~~D-- 84 (179) T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRITLVDAPGHADLIRAVVSAADIID-- 84 (179) T ss_dssp EEEEEECTTSSHHHHHHHHHTTC--------------------CCCEEEETTEEEEECCCSSHHHHHHHHHHHTTSCC-- T ss_pred EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEECCEEEEEECCCCCHHHHHHHHHHHCCE-- T ss_conf 689984189888899999976310101255312000024664112331111212899717663024566666643150-- Q ss_pred HEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHH Q ss_conf 21020002120324799999999999999997248888999999999999986203500057777676645456654000 Q Ver_Hs_NP_0061 130 ETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEEN 209 (492) Q Consensus 130 ~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~ 209 (492) +++++.|-+++ ...+-.+-+..+.. T Consensus 85 --~vi~vid~~~~--~~~~~~e~~~~~~~--------------------------------------------------- 109 (179) T d1wb1a4 85 --LALIVVDAKEG--PKTQTGEHMLILDH--------------------------------------------------- 109 (179) T ss_dssp --EEEEEEETTTC--SCHHHHHHHHHHHH--------------------------------------------------- T ss_pred --EEEEEEECCCC--CCCCHHHHHHHHHH--------------------------------------------------- T ss_conf --57887405455--34103899999985--------------------------------------------------- Q ss_pred CCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH Q ss_conf 03688876221479940799850752255554205774778999999999999870873788456663567999999988 Q Ver_Hs_NP_0061 210 VALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVH 289 (492) Q Consensus 210 v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~H 289 (492) +|+|+++|++|+|.. +.+..++.-..+..++...--.-+...|.||++...|++-|+..|++ T Consensus 110 -------------~~~p~iiviNK~Dl~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SA~~g~gi~eL~~~i~~ 171 (179) T d1wb1a4 110 -------------FNIPIIVVITKSDNA-----GTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLIIT 171 (179) T ss_dssp -------------TTCCBCEEEECTTSS-----CHHHHHHHHHHHHHHHHHSSSGGGCCEEECCTTTCTTHHHHHHHHHH T ss_pred -------------CCCCEEEEECCCCCC-----CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH T ss_conf -------------057148872151246-----87788999999999886531789843788405679998999999997 Q ss_pred HH Q ss_conf 87 Q Ver_Hs_NP_0061 290 KT 291 (492) Q Consensus 290 rl 291 (492) ++ T Consensus 172 ~l 173 (179) T d1wb1a4 172 TL 173 (179) T ss_dssp HH T ss_pred HC T ss_conf 55 No 32 >d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)} Probab=97.98 E-value=3.4e-05 Score=50.17 Aligned_columns=155 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEH Q ss_conf 88860788548999998620133678743103353021213473001005885676021135322477343302102000 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFV 136 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI~ 136 (492) |+++|..++|||||+.+|.+.+...-.-..++.+..+...+..-. +|-..|...+..+.+....-- -.|+++ T Consensus 16 I~lvG~~~~GKTsll~~l~~~~~~~~~~t~~~~~~~i~~~~~~~~----i~d~~g~~~~~~~~~~~~~~~----~~ii~v 87 (186) T d1f6ba_ 16 LVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFT----TFDLGGHIQARRVWKNYLPAI----NGIVFL 87 (186) T ss_dssp EEEEEETTSSHHHHHHHHSCC------CCCCCSCEEEEETTEEEE----EEEECC----CCGGGGGGGGC----SEEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEEEEEE----EEECCCHHHHHHHHHHHHCCC----CEEEEE T ss_conf 999816999799999998468154302268887899851147899----840552134467778774055----558888 Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCC Q ss_conf 21203247999999999999999972488889999999999999862035000577776766454566540000368887 Q Ver_Hs_NP_0061 137 ADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLGD 216 (492) Q Consensus 137 lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLge 216 (492) .|.+++..+.+....|..++++.-. T Consensus 88 ~D~~d~~~~~~~~~~l~~~~~~~~~------------------------------------------------------- 112 (186) T d1f6ba_ 88 VDCADHERLLESKEELDSLMTDETI------------------------------------------------------- 112 (186) T ss_dssp EETTCGGGHHHHHHHHHHHHTCGGG------------------------------------------------------- T ss_pred EECCCCCCHHHHHHHHHHHHHHHHC------------------------------------------------------- T ss_conf 5245756667899999998740101------------------------------------------------------- Q ss_pred CCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC-------------EEEEECCCCCCCHHHH Q ss_conf 622147994079985075225555420577477899999999999987087-------------3788456663567999 Q Ver_Hs_NP_0061 217 NVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGA-------------ALIYTSVKEEKNLDLL 283 (492) Q Consensus 217 g~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGA-------------sLiYTS~ke~kNl~lL 283 (492) ..+|++||++|.|.. .....|+ |.+.+..+....+. .+|-||++....++=+ T Consensus 113 ------~~~piiiv~NK~Dl~------~~~~~~e---i~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~SA~tg~Gi~E~ 177 (186) T d1f6ba_ 113 ------ANVPILILGNKIDRP------EAISEER---LREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEG 177 (186) T ss_dssp ------TTSCEEEEEECTTST------TCCCHHH---HHHHHTCTTTCCCSSCCCTTTCCSCCEEEEECBTTTTBSHHHH T ss_pred ------CCCEEEEEECCCCCC------CCCCHHH---HHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHH T ss_conf ------796089985265752------0589899---9998400144301333335663369637999851348888999 Q ss_pred HHHHHH Q ss_conf 999988 Q Ver_Hs_NP_0061 284 YKYIVH 289 (492) Q Consensus 284 ykYi~H 289 (492) ..+|.+ T Consensus 178 ~~~l~~ 183 (186) T d1f6ba_ 178 FRWMAQ 183 (186) T ss_dssp HHHHHT T ss_pred HHHHHH T ss_conf 999999 No 33 >d1m2ob_ c.37.1.8 (B:) SAR1 {Baker's yeast (Saccharomyces cerevisiae)} Probab=97.92 E-value=9.2e-05 Score=47.33 Aligned_columns=156 Identities=19% Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEH Q ss_conf 88860788548999998620133678743103353021213473001005885676021135322477343302102000 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFV 136 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI~ 136 (492) |+++|..++|||||+.+|.+.+......-.+..+..+...+..-. +|...|...+....+..... -..+++| T Consensus 3 I~iiG~~n~GKTtLi~~l~~~~~~~~~~t~~~~~~~~~~~~~~~~----i~d~~~~~~~~~~~~~~~~~----~~~ii~v 74 (167) T d1m2ob_ 3 LLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFT----TFDLGGHIQARRLWKDYFPE----VNGIVFL 74 (167) T ss_dssp EEEEESTTSSHHHHHHHHHHSCCCCCCCCCSCEEEEEEETTEEEE----EEECCCSGGGTTSGGGGCTT----CCEEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEEEEE----EEEEECHHHHCCCHHHHHCC----CCEEEEE T ss_conf 899836999899999998379212454467667620300478999----85310011210001233236----5178997 Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCC Q ss_conf 21203247999999999999999972488889999999999999862035000577776766454566540000368887 Q Ver_Hs_NP_0061 137 ADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLGD 216 (492) Q Consensus 137 lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLge 216 (492) .|.+.++. ++.+..|+.-+. T Consensus 75 ~D~~~~~~-~~~~~~~l~~~~----------------------------------------------------------- 94 (167) T d1m2ob_ 75 VDAADPER-FDEARVELDALF----------------------------------------------------------- 94 (167) T ss_dssp EETTCGGG-HHHHHHHHHHHH----------------------------------------------------------- T ss_pred CCCCCCCC-HHHHHHHHHHHH----------------------------------------------------------- T ss_conf 04577456-678999999998----------------------------------------------------------- Q ss_pred CCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHH-----HHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH Q ss_conf 622147994079985075225555420577477899999-----99999998708737884566635679999999 Q Ver_Hs_NP_0061 217 NVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQ-----SHLRRFCLQYGAALIYTSVKEEKNLDLLYKYI 287 (492) Q Consensus 217 g~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iq-----q~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi 287 (492) .....-++|+++|++|+|... ....+++---+ .-...++-...--+|-||++....++=+.++| T Consensus 95 -~~~~~~~~piiiv~nK~Dl~~------~~~~~ei~~~l~l~~~~~~~~~~~~~~~~i~~~Sa~tg~Gi~e~~~~l 163 (167) T d1m2ob_ 95 -NIAELKDVPFVILGNKIDAPN------AVSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWL 163 (167) T ss_dssp -TCGGGTTCCEEEEEECTTSTT------CCCHHHHHHHTTCSSCCC---CCSSCCEEEEECBTTTTBSHHHHHHHH T ss_pred -HHHHCCCCEEEEEEECCCCCC------CCCHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHH T ss_conf -633207980899973348865------679889998807011211233104586369998513589879999999 No 34 >d1azsc2 c.37.1.8 (C:36-66,C:202-393) Transducin (alpha subunit) {Cow (Bos taurus)} Probab=97.88 E-value=0.00027 Score=44.27 Aligned_columns=165 Identities=21% Q ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEH Q ss_conf 88860788548999998620133678743103353021213473001005885676021135322477343302102000 Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFV 136 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI~ 136 (492) |+++|..++|||||+.+|.+.+......|.....+.+.+ .++..|-..|.-....+......- -+.++++ T Consensus 8 I~llG~~nvGKSSlln~l~~~~~~~~T~g~~~~~i~~~~------~~~~i~D~~G~~~~~~~~~~~~~~----~~~ii~v 77 (223) T d1azsc2 8 LLLLGAGESGKSTIVKQMRILHVNVLTSGIFETKFQVDK------VNFHMFDVGGQRDERRKWIQCFND----VTAIIFV 77 (223) T ss_dssp EEEEESTTSSHHHHHHHHHHHHCCCCCCSEEEEEEEETT------EEEEEEEECCSGGGGGGGGGGTTT----CCEEEEE T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEECCEEEEEEEECC------EEEEEEEECCCHHHHHHHHHHHHH----HHHHHHH T ss_conf 899845998799999988357612100140799999736------899998722401333455654210----0343345 Q ss_pred HHHC----------CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCC Q ss_conf 2120----------324799999999999999997248888999999999999986203500057777676645456654 Q Ver_Hs_NP_0061 137 ADMS----------RPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSD 206 (492) Q Consensus 137 lD~s----------~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~d 206 (492) .|.+ .-+.+.++++-|-.++.+.... T Consensus 78 ~~~s~~~~~l~~d~~~~~~~es~~l~~~i~~~~~~~-------------------------------------------- 113 (223) T d1azsc2 78 VASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLR-------------------------------------------- 113 (223) T ss_dssp EETTGGGCBCTTTSCSBHHHHHHHHHHHHHTCTTCS-------------------------------------------- T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC-------------------------------------------- T ss_conf 466556766544214665489999999985260006-------------------------------------------- Q ss_pred CHHCCCCCCCCCEECCCCCEEEEEEECCCHHH-----HHHHCCCCCHHH------------------HHHHHHHHHHHHH Q ss_conf 00003688876221479940799850752255-----554205774778------------------9999999999998 Q Ver_Hs_NP_0061 207 EENVALPLGDNVLTHNLGIPVLVVCTKCDAVS-----VLEKEHDYRDEH------------------LDFIQSHLRRFCL 263 (492) Q Consensus 207 e~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie-----~LeKe~~y~dE~------------------fD~Iqq~LR~~cL 263 (492) +.|+++|+.|+|.++ ...+-..|--|+ ++....|++.-++ T Consensus 114 -----------------~~piIlvlNK~DL~~~Ki~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~a~~~i~~~f~ 176 (223) T d1azsc2 114 -----------------TISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFL 176 (223) T ss_dssp -----------------SCCEEEEEECHHHHHHHHHHCSSCGGGTCGGGGTCCCCSSCCCCTTCCHHHHHHHHHHHHHHH T ss_pred -----------------CCCEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHH T ss_conf -----------------884899983410687665136654567404324666750000014788679999999999999 Q ss_pred HC-------CCEEE--EECCCCCCCHHHHHHHHHHHHH Q ss_conf 70-------87378--8456663567999999988872 Q Ver_Hs_NP_0061 264 QY-------GAALI--YTSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 264 ~Y-------GAsLi--YTS~ke~kNl~lLykYi~Hrly 292 (492) +. ...+. ||++....|++....++.--++ T Consensus 177 ~~~~~~~~~~~~~y~h~t~a~dt~ni~~vf~~v~d~i~ 214 (223) T d1azsc2 177 RISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRDIIQ 214 (223) T ss_dssp HHHHTSCTTSSCEEEEECCTTCHHHHHHHHHHHHHHHH T ss_pred HHHCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHH T ss_conf 98516889863067753100010899999999999999 No 35 >d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis} Probab=97.85 E-value=0.00011 Score=46.79 Aligned_columns=157 Identities=16% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCC------------CCCCCCCCCC Q ss_conf 4888607885489999986201336787431033530212134730010058856760------------2113532247 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDL------------YHKGLLKFAV 123 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~------------~~~~LLk~al 123 (492) .|.|+|..++|||||+.+|-+...--.-.....+-.+..-...++. ..+++-+. .+..++...+ T Consensus 25 ~I~iiG~~n~GKSSLin~L~~~~~~~~~~~~~~~t~~~~~~~~~~~----~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~ 100 (195) T d1svia_ 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDE----LHFVDVPGYGFAKVSKSEREAWGRMIETYI 100 (195) T ss_dssp EEEEEEBTTSSHHHHHHHHHTC-------------CCEEEEEETTT----EEEEECCCBCCCSSCHHHHHHHHHHHHHHH T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCC----EEEEEECCCCCCCCCHHHHHHHHHHHHHHH T ss_conf 8999835999789999998578625763156751133467620565----079980775433465035778999887654 Q ss_pred CCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCC Q ss_conf 73433021020002120324799999999999999997248888999999999999986203500057777676645456 Q Ver_Hs_NP_0061 124 SAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTS 203 (492) Q Consensus 124 ~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s 203 (492) .. ....-+++++.|...+|+ ++..+.+..++. T Consensus 101 ~~-~~~~d~v~~v~d~~~~~~--~~~~~~~~~~~~--------------------------------------------- 132 (195) T d1svia_ 101 TT-REELKAVVQIVDLRHAPS--NDDVQMYEFLKY--------------------------------------------- 132 (195) T ss_dssp HH-CTTEEEEEEEEETTSCCC--HHHHHHHHHHHH--------------------------------------------- T ss_pred HH-HHHHHHHHHHCCCCCCCC--HHHHHHHHHHCC--------------------------------------------- T ss_conf 45-544222111012345762--567887642000--------------------------------------------- Q ss_pred CCCCHHCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH Q ss_conf 65400003688876221479940799850752255554205774778999999999999870873788456663567999 Q Ver_Hs_NP_0061 204 GSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLL 283 (492) Q Consensus 204 ~~de~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lL 283 (492) .++|++||.+|+|.+ -.++.-..+++..+.+-+....-+|+||++...+++-| T Consensus 133 -------------------~~~p~ivv~NK~Dl~--------~~~~~~~~~~~i~~~l~~~~~~~i~~vSA~tg~Gi~el 185 (195) T d1svia_ 133 -------------------YGIPVIVIATKADKI--------PKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEA 185 (195) T ss_dssp -------------------TTCCEEEEEECGGGS--------CGGGHHHHHHHHHHHHTCCTTSEEEECCTTTCTTHHHH T ss_pred -------------------CCCHHEEEEECCCCC--------CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHH T ss_conf -------------------110001322001467--------87578899999999973058996899854668788999 Q ss_pred HHHHHHHH Q ss_conf 99998887 Q Ver_Hs_NP_0061 284 YKYIVHKT 291 (492) Q Consensus 284 ykYi~Hrl 291 (492) ..+|.-.+ T Consensus 186 ~~~i~~~i 193 (195) T d1svia_ 186 WGAIKKMI 193 (195) T ss_dssp HHHHHHHH T ss_pred HHHHHHHH T ss_conf 99999984 No 36 >d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus} Probab=97.81 E-value=4e-05 Score=49.70 Aligned_columns=153 Identities=22% Q ss_pred EEEEEECCCCCHHHHHHHH----------------------------------HCCCCCCCCCCCEEEEEECCCCCCCCC Q ss_conf 4888607885489999986----------------------------------201336787431033530212134730 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKL----------------------------------QGAEHGKKGRGLEYLYLSVHDEDRDDH 101 (492) Q Consensus 56 nILvLG~~~sGKttLi~~L----------------------------------q~~e~~kkg~gLeY~Yl~V~D~drDd~ 101 (492) ||.|+|..++|||||+.+| .-.++..+|.-.++.+....-..+ T Consensus 5 nv~iiGhvd~GKSTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~er~rgiti~~~~~~~~~~~~--- 81 (224) T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAFLLDRLKEERERGVTINLTFMRFETKKY--- 81 (224) T ss_dssp EEEEEESTTSSHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHC-----------CEEECSSC--- T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCC--- T ss_conf 89998414888789999999871672068899999887553100123114545764311256632102456604685--- Q ss_pred CCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH Q ss_conf 01005885676021135322477343302102000212032479999999999999999724888899999999999998 Q Ver_Hs_NP_0061 102 TRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDF 181 (492) Q Consensus 102 ~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~ 181 (492) .+-++|-+ +|..+++..+..-+..+..|+++-.-.-++..-.+++. +.++.+ T Consensus 82 ---~i~~iD~P-GH~~f~~~~~~g~~~~D~ailVVda~~G~~~~~~~v~~--------------------qt~eh~---- 133 (224) T d1jnya3 82 ---FFTIIDAP-GHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEG--------------------QTREHI---- 133 (224) T ss_dssp ---EEEECCCS-SSTTHHHHHHHTSSCCSEEEEEEECSTTHHHHHHSTTC--------------------HHHHHH---- T ss_pred ---EEEEECCC-CCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCHHH--------------------HHHHHH---- T ss_conf ---78742376-51134788998765533146687555677522013446--------------------899999---- Q ss_pred HHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCE-EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHH Q ss_conf 620350005777767664545665400003688876221479940-7998507522555542057747789999999999 Q Ver_Hs_NP_0061 182 QDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIP-VLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRR 260 (492) Q Consensus 182 qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLgeg~Lt~NLGiP-i~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~ 260 (492) .+-..+|++ ++|++.|.|.+ +..|..+.|+-|...++. T Consensus 134 ------------------------------------~~~~~~g~~~iIV~iNKiD~~-----~~~~~~~~~~~i~~~i~~ 172 (224) T d1jnya3 134 ------------------------------------ILAKTMGLDQLIVAVNKMDLT-----EPPYDEKRYKEIVDQVSK 172 (224) T ss_dssp ------------------------------------HHHHHTTCTTCEEEEECGGGS-----SSTTCHHHHHHHHHHHHH T ss_pred ------------------------------------HHHHHHCCCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHH T ss_conf ------------------------------------999980798089998368888-----855136899999999999 Q ss_pred HHHHCC-----CEEEEECCCCCCCH Q ss_conf 998708-----73788456663567 Q Ver_Hs_NP_0061 261 FCLQYG-----AALIYTSVKEEKNL 280 (492) Q Consensus 261 ~cL~YG-----AsLiYTS~ke~kNl 280 (492) ++-+|| +..|.+|+..-.|+ T Consensus 173 ~l~~~g~~~~~i~~IPISA~~G~ni 197 (224) T d1jnya3 173 FMRSYGFNTNKVRFVPVVAPSGDNI 197 (224) T ss_dssp HHHHTTCCCTTCEEEECBTTTTBTT T ss_pred HHHHHCCCCCCEEEEEECCCCCCCC T ss_conf 9997188977642786106658856 No 37 >d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli} Probab=97.81 E-value=4.6e-05 Score=49.30 Aligned_columns=167 Identities=20% Q ss_pred HHHCCCCCCCCC--CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECC--------- Q ss_conf 981786227887--648886078854899999862013367874310335302121347300100588567--------- Q Ver_Hs_NP_0061 43 VSTRARSKLPSG--KNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDG--------- 111 (492) Q Consensus 43 V~~~~~~klp~~--KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg--------- 111 (492) +++-..+.+|.+ -.|.|+|..++|||||+.+|-+.+.........++-........++..+ +|.+++ T Consensus 3 ~~~~~~~~~p~~~~~~I~iiG~~~vGKSSLin~L~~~~~~~~~~~~~~tt~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 80 (188) T d1puia_ 3 MSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKR--LVDLPGYGYAEVPEE 80 (188) T ss_dssp EEESSGGGSSCSCSEEEEEEECTTSSHHHHHTTTCCC-------------CCEEEEEEETTEE--EEECCCCC------C T ss_pred CCCCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEEECCEE--EEEECCCCCCCCCHH T ss_conf 455346558798886789973699878899999857873243056564012234554202327--776401001257635 Q ss_pred -CCCCCCCCCCCCCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHC Q ss_conf -6021135322477343302102000212032479999999999999999724888899999999999998620350005 Q Ver_Hs_NP_0061 112 -DLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEG 190 (492) Q Consensus 112 -~~~~~~LLk~al~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~ 190 (492) .-.+..+....+.. ...--+++++.|.... +.++-...+..++.. T Consensus 81 ~~~~~~~~~~~~~~~-~~~~~~v~~v~~~~~~--~~~~~~~~~~~~~~~------------------------------- 126 (188) T d1puia_ 81 MKRKWQRALGEYLEK-RQSLQGLVVLMDIRHP--LKDLDQQMIEWAVDS------------------------------- 126 (188) T ss_dssp CHHHHHHHHHHHHHH-CTTEEEEEEEEETTSC--CCHHHHHHHHHHHHT------------------------------- T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHC--CHHHHHHHHHHHHHH------------------------------- T ss_conf 677877666789987-6432333210001001--117899999999873------------------------------- Q ss_pred CCCCCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC--E Q ss_conf 77776766454566540000368887622147994079985075225555420577477899999999999987087--3 Q Ver_Hs_NP_0061 191 CQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGA--A 268 (492) Q Consensus 191 ~~gs~~r~~~~~s~~de~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGA--s 268 (492) ++|++||.+|+|. ...++..-..+.++.....++. . T Consensus 127 ---------------------------------~~p~iiv~nK~D~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (188) T d1puia_ 127 ---------------------------------NIAVLVLLTKADK---------LASGARKAQLNMVREAVLAFNGDVQ 164 (188) T ss_dssp ---------------------------------TCCEEEEEECGGG---------SCHHHHHHHHHHHHHHHGGGCSCEE T ss_pred ---------------------------------HHHHHHHHHHCCC---------CCHHHHHHHHHHHHHHHHHHCCCCC T ss_conf ---------------------------------2245433201156---------8877899999999999985069983 Q ss_pred EEEECCCCCCCHHHHHHHH Q ss_conf 7884566635679999999 Q Ver_Hs_NP_0061 269 LIYTSVKEEKNLDLLYKYI 287 (492) Q Consensus 269 LiYTS~ke~kNl~lLykYi 287 (492) .+.+|++...+++-|.+.| T Consensus 165 i~~~SA~~g~gI~eL~~~l 183 (188) T d1puia_ 165 VETFSSLKKQGVDKLRQKL 183 (188) T ss_dssp EEECBTTTTBSHHHHHHHH T ss_pred EEEEECCCCCCHHHHHHHH T ss_conf 7997435688888999999 No 38 >d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli} Probab=97.80 E-value=0.00012 Score=46.55 Aligned_columns=165 Identities=23% Q ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECC---------CCCCCCCCCCCCC Q ss_conf 7648886078854899999862013367874310335302121347300100588567---------6021135322477 Q Ver_Hs_NP_0061 54 GKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDG---------DLYHKGLLKFAVS 124 (492) Q Consensus 54 ~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg---------~~~~~~LLk~al~ 124 (492) |..|.++|..++|||||+.+|-+.+.........=+...+......+..+..+|=.-| ...........+. T Consensus 5 ~~~I~iiG~~n~GKSSLin~l~~~~~~~~~~~~~tt~~~~~~~~~~~~~~~~~~DtpG~~~~~~~~~~~~~~~~~~~~~~ 84 (179) T d1egaa1 5 CGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIG 84 (179) T ss_dssp EEEEEEECSSSSSHHHHHHHHHTCSEEECCCCSSCCSSCEEEEEEETTEEEEEESSSSCCHHHHHHHHHHHTCCTTSCCC T ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCEEEEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 53689983599978899999856740121155625665005677411000110157875201222222333223322233 Q ss_pred CCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCC Q ss_conf 34330210200021203247999999999999999972488889999999999999862035000577776766454566 Q Ver_Hs_NP_0061 125 AESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSG 204 (492) Q Consensus 125 ~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~ 204 (492) .-.+ +++++|-+++-...+.+..|+ T Consensus 85 ~~d~----vi~vvD~~~~~~~~~~~~~~~--------------------------------------------------- 109 (179) T d1egaa1 85 DVEL----VIFVVEGTRWTPDDEMVLNKL--------------------------------------------------- 109 (179) T ss_dssp CEEE----EEEEEETTCCCHHHHHHHHHH--------------------------------------------------- T ss_pred HHHH----HHHHCCCCCCCHHHHHHHHHH--------------------------------------------------- T ss_conf 2322----000002566402456665555--------------------------------------------------- Q ss_pred CCCHHCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC-CEEEEECCCCCCCHHHH Q ss_conf 54000036888762214799407998507522555542057747789999999999998708-73788456663567999 Q Ver_Hs_NP_0061 205 SDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYG-AALIYTSVKEEKNLDLL 283 (492) Q Consensus 205 ~de~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YG-AsLiYTS~ke~kNl~lL 283 (492) ...+.|+++|.+|+|.+ +.-.-+...+..+..+.+ +.++++|+++..|++-| T Consensus 110 ----------------~~~~~piIiv~NK~D~~-----------~~~~~~~~~~~~~~~~~~~~~~~~iSA~~~~gi~~l 162 (179) T d1egaa1 110 ----------------REGKAPVILAVNKVDNV-----------QEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTI 162 (179) T ss_dssp ----------------HSSSSCEEEEEESTTTC-----------CCHHHHHHHHHHHHTTSCCSEEEECCTTTTTTHHHH T ss_pred ----------------HHCCCCEEEECCCCCCC-----------CCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH T ss_conf ----------------53067253310562331-----------365578899999998359986799733568888899 Q ss_pred HHHHHHHHHCCCCCCCC Q ss_conf 99998887277767655 Q Ver_Hs_NP_0061 284 YKYIVHKTYGFHFTTPA 300 (492) Q Consensus 284 ykYi~Hrlygfpf~~ka 300 (492) ...|...+=--|+-.|. T Consensus 163 ~~~i~~~lpe~~~~~pe 179 (179) T d1egaa1 163 AAIVRKHLPEATHHFPE 179 (179) T ss_dssp HHHHHTTCCBCCCSSCT T ss_pred HHHHHHHCCCCCCCCCC T ss_conf 99999867778898889 No 39 >d1rfla_ c.37.1.8 (A:) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli} Probab=97.76 E-value=6.4e-06 Score=54.92 Aligned_columns=158 Identities=19% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHE---- Q ss_conf 4888607885489999986201336787431033530212134730010058856760211353224773433021---- Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPET---- 131 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~T---- 131 (492) .|+++|..++|||||+.+|-+.+...-..-...+.-...-...-+..++.+|=.-|-......+........+.+. T Consensus 9 kI~ivG~~~~GKStLin~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~i~DtpG~~~~~~~~~~~~~~~~~~~i~~~d 88 (172) T d1rfla_ 9 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWQEIEQAD 88 (172) T ss_dssp EEEECSSSSSSSHHHHHHHSSCSSCCCCCCSSCCTTCCCSCCCCSSCSSCCCCCCCSHHHHHHHHHHTSCCSCCCCCCEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 79998249997899999985675303212355321112565202200232203566310220123211000123332037 Q ss_pred EEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCC Q ss_conf 02000212032479999999999999999724888899999999999998620350005777767664545665400003 Q Ver_Hs_NP_0061 132 LVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVA 211 (492) Q Consensus 132 lVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~ 211 (492) ++++++|.+.+ ....+...|...+ T Consensus 89 ~ii~viD~~~~-~~~~~~~~~~~~~------------------------------------------------------- 112 (172) T d1rfla_ 89 RVLFMVDGTTT-DAVDPAEIWPEFI------------------------------------------------------- 112 (172) T ss_dssp EEECCCCTTCC-CSTTHHHHHHHHS------------------------------------------------------- T ss_pred CEEEEEECCCC-CCHHHHHHHHHHH------------------------------------------------------- T ss_conf 24899867888-8744689999999------------------------------------------------------- Q ss_pred CCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH Q ss_conf 68887622147994079985075225555420577477899999999999987087378845666356799999998887 Q Ver_Hs_NP_0061 212 LPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 212 lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrl 291 (492) -..+-+.|+++|.+|+|.......-..+ ++..+|++|++...+++.|+++|. .. T Consensus 113 -------~~~~~~~piiiv~NK~Dl~~~~~~l~~~------------------~~~~ii~iSa~~g~gI~~L~~~i~-~~ 166 (172) T d1rfla_ 113 -------ARLPAKLPITVVRNKADITGETLGMSEV------------------NGHALIRLSARTGEGVDVLRNHLK-QS 166 (172) T ss_dssp -------SSSCCCCEECCCSCHHHHGGGTSSSSSS------------------CCSCCEECCSSSCTTSHHHHHHHH-TT T ss_pred -------HHHHCCCCEEEEECCCCCCHHHHHHHHH------------------CCCCEEEEECCCCCCHHHHHHHHH-HH T ss_conf -------8730697289960422652235778862------------------289758984356878789999999-98 Q ss_pred HCCC Q ss_conf 2777 Q Ver_Hs_NP_0061 292 YGFH 295 (492) Q Consensus 292 ygfp 295 (492) .|++ T Consensus 167 ~~~~ 170 (172) T d1rfla_ 167 MGIH 170 (172) T ss_dssp CCCC T ss_pred CCCC T ss_conf 1745 No 40 >d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi} Probab=97.62 E-value=0.00066 Score=41.73 Aligned_columns=162 Identities=22% Q ss_pred EEEEEECCCCCHHHHHHHHHC--------CCCCCCCCCCEEEEEE--------------CCCCCCCCCCCCCEEEECCCC Q ss_conf 488860788548999998620--------1336787431033530--------------212134730010058856760 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQG--------AEHGKKGRGLEYLYLS--------------VHDEDRDDHTRCNVWILDGDL 113 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~--------~e~~kkg~gLeY~Yl~--------------V~D~drDd~~R~~VwiLdg~~ 113 (492) ||-|.|..++|||||+.+|-| .+.+....-..+.+.. ..+...........+.+---| T Consensus 7 ~VaiiG~~naGKSTLln~L~g~~~~~~~~~~~~g~T~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~i~Dtp 86 (195) T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTGVWTDTHSEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAP 86 (195) T ss_dssp EEEEECSTTSSHHHHHHHHHTCCCC--CGGGGSCSSSCCEEEEEEEEECTTTCCEESSSBCTTTCCBCEEEEEEEEEECS T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHEEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEECC T ss_conf 89998406987788999999877666654431562222010111000354201122100011100120365079997175 Q ss_pred CCCCCCCCCCCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCC Q ss_conf 21135322477343302102000212032479999999999999999724888899999999999998620350005777 Q Ver_Hs_NP_0061 114 YHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQG 193 (492) Q Consensus 114 ~~~~LLk~al~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~g 193 (492) +|...++.....-...+. +++++|-.......+.-..+......+. T Consensus 87 G~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------- 132 (195) T d1kk1a3 87 GHEALMTTMLAGASLMDG-AILVIAANEPCPRPQTREHLMALQIIGQ--------------------------------- 132 (195) T ss_dssp SHHHHHHHHHHCGGGCSE-EEEEEETTSCSSCHHHHHHHHHHHHHTC--------------------------------- T ss_pred CHHHHHHHHHHHHHHHHH-HHHHHHHHCCCCCHHHHHHHHHHHHHCC--------------------------------- T ss_conf 558999999998877544-4433220012111026789999997408--------------------------------- Q ss_pred CCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC---CEEE Q ss_conf 7676645456654000036888762214799407998507522555542057747789999999999998708---7378 Q Ver_Hs_NP_0061 194 SPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYG---AALI 270 (492) Q Consensus 194 s~~r~~~~~s~~de~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YG---AsLi 270 (492) .|+++|..|+|.++ .+.++-....+|.+.-.++ +-+| T Consensus 133 -------------------------------~~i~~~vNK~D~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ii 172 (195) T d1kk1a3 133 -------------------------------KNIIIAQNKIELVD---------KEKALENYRQIKEFIEGTVAENAPII 172 (195) T ss_dssp -------------------------------CCEEEEEECGGGSC---------HHHHHHHHHHHHHHHTTSTTTTCCEE T ss_pred -------------------------------CEEEEEEECCCCCC---------HHHHHHHHHHHHHHHHHCCCCCEEEE T ss_conf -------------------------------80566551135545---------56899999999998743178870389 Q ss_pred EECCCCCCCHHHHHHHHHHHH Q ss_conf 845666356799999998887 Q Ver_Hs_NP_0061 271 YTSVKEEKNLDLLYKYIVHKT 291 (492) Q Consensus 271 YTS~ke~kNl~lLykYi~Hrl 291 (492) ++|++...|++-|.+.|...+ T Consensus 173 ~vSA~~G~gid~L~~~I~~~i 193 (195) T d1kk1a3 173 PISALHGANIDVLVKAIEDFI 193 (195) T ss_dssp ECBTTTTBSHHHHHHHHHHHS T ss_pred EEECCCCCCHHHHHHHHHHHC T ss_conf 830667899899999999746 No 41 >d1etu_1 c.37.1.8 (5-200) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Escherichia coli} Probab=97.61 E-value=0.00022 Score=44.80 Aligned_columns=154 Identities=27% Q ss_pred EEEEEECCCCCHHHHHHHHHC-------------------CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCC Q ss_conf 488860788548999998620-------------------1336787431033530212134730010058856760211 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQG-------------------AEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHK 116 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~-------------------~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~ 116 (492) ||.|+|..++|||||+.+|-+ .++..+|--.+-.+..+...++ .+-++|-+ +|. T Consensus 9 nI~iiGh~d~GKTTL~~~L~~~~~~~~~~~~~~~~~~d~~~~e~~~giT~~~~~~~~~~~~~------~i~~iDTP-GH~ 81 (196) T d1etu_1 9 NVGTIGHVDHGKTTLTAAITTVLAKTYGGAAXXXXXXXXXXXXXXXGITINTSHVEYDTPTR------HYAHVDCP-GHA 81 (196) T ss_dssp EEEEECSSSSSHHHHHHHHHHHHHHHH-------------------CCCCCCEEEEEECSSC------EEEEEECS-SHH T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCCC------EEEEEECC-HHH T ss_conf 89998212788789999999987665210111000000112223453367237899843883------59997263-256 Q ss_pred CCCCCCCCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC Q ss_conf 35322477343302102000212032479999999999999999724888899999999999998620350005777767 Q Ver_Hs_NP_0061 117 GLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQ 196 (492) Q Consensus 117 ~LLk~al~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~ 196 (492) .+.+.....-++.+ ++|+++|-.+. ++.|-.+-+..++ T Consensus 82 ~f~~~~~~~~~~aD-~aiLVIda~eg--i~~qt~e~l~~~~--------------------------------------- 119 (196) T d1etu_1 82 DYVKNMITGAAQMD-GAILVVAATDG--PMPQTREHILLGR--------------------------------------- 119 (196) T ss_dssp HHHHHHHSSTTCCS-EEEEEECTTSC--SCHHHHHHHHHHH--------------------------------------- T ss_pred HHHHHHHHHHHHHH-HEEEEECCCCC--CCCHHHHHHHHHH--------------------------------------- T ss_conf 78999999988860-13302114456--6624789999999--------------------------------------- Q ss_pred CCCCCCCCCCCHHCCCCCCCCCEECCCCCE-EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC-----CEEE Q ss_conf 664545665400003688876221479940-7998507522555542057747789999999999998708-----7378 Q Ver_Hs_NP_0061 197 RRGPLTSGSDEENVALPLGDNVLTHNLGIP-VLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYG-----AALI 270 (492) Q Consensus 197 r~~~~~s~~de~~v~lPLgeg~Lt~NLGiP-i~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YG-----AsLi 270 (492) .+|+| ++||++|.|.+ ..+|.++.+.+.+|.+..+|| +-+| T Consensus 120 -------------------------~~~~~~iiVviNKiDli--------~~~~~~~~~~~~~~~~l~~~~~~~~~~piv 166 (196) T d1etu_1 120 -------------------------QVGVPYIIVFLNKCDMV--------DDEELLELVEMEVRELLSQYDFPGDDTPIV 166 (196) T ss_dssp -------------------------HHTCCEEEEEEECCSSC--------CCHHHHHHHHHHHHHHHHHHSSCSSSSCEE T ss_pred -------------------------HCCCCEEEEEECCCCCC--------CCHHHHHHHHHHHHHHHHHCCCCCCCEEEE T ss_conf -------------------------71896189970456888--------878999999999998764138998845589 Q ss_pred EECCCCC--------CCHHHHHHHHHHHH Q ss_conf 8456663--------56799999998887 Q Ver_Hs_NP_0061 271 YTSVKEE--------KNLDLLYKYIVHKT 291 (492) Q Consensus 271 YTS~ke~--------kNl~lLykYi~Hrl 291 (492) +.|++.. .++.-|...+.-.+ T Consensus 167 ~iSA~kg~~g~~~~~~~i~~l~~~i~~~i 195 (196) T d1etu_1 167 RGSALKALEGDAEWEAKILELAGFLDSYI 195 (196) T ss_dssp EECHHHHHHSCSHHHHHHHHHHHHHHHHC T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHC T ss_conf 71024333441578999999999986307 No 42 >d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial} Probab=97.51 E-value=0.00011 Score=46.85 Aligned_columns=154 Identities=27% Q ss_pred EEEEEECCCCCHHHHHHHHHCC-------------------CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCC Q ss_conf 4888607885489999986201-------------------336787431033530212134730010058856760211 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGA-------------------EHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHK 116 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~-------------------e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~ 116 (492) ||.|+|..++|||||+.+|-+. ++..+|--.+..+.......+. +-++|-+ +|. T Consensus 5 ni~iiGhvd~GKSTL~~~L~~~~~~~~~~~~~~~~~~D~~~~E~~rgiTi~~~~~~~~~~~~~------~~~iDtP-Gh~ 77 (196) T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEEIDNAPEERARGITINAAHVEYSTAARH------YAHTDCP-GHA 77 (196) T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHTTSBCCCCHHHHHSCCEEEETTEEEECEEEEEECSSCE------EEEEECS-SHH T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEECCCEEEEEECCCCE------EEEECCC-HHH T ss_conf 889986316886789999999987520024455654067642010540002047897125532------4652330-034 Q ss_pred CCCCCCCCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCC Q ss_conf 35322477343302102000212032479999999999999999724888899999999999998620350005777767 Q Ver_Hs_NP_0061 117 GLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQ 196 (492) Q Consensus 117 ~LLk~al~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~ 196 (492) .+++..+..-+..+..|+++ +.......+..+.+ T Consensus 78 ~f~~~~~~~~~~aD~aiLVV---------------------------da~~g~~~qt~e~~------------------- 111 (196) T d1d2ea3 78 DYVKNMITGTAPLDGCILVV---------------------------AANDGPMPQTREHL------------------- 111 (196) T ss_dssp HHHHHHHHTSSCCSEEEEEE---------------------------ETTTCSCHHHHHHH------------------- T ss_pred HHHHHHHHHHHHHCCEEEEE---------------------------ECCCCCCHHHHHHH------------------- T ss_conf 67889999876521046887---------------------------33563103479999------------------- Q ss_pred CCCCCCCCCCCHHCCCCCCCCCEECCCCCE-EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC-----CEEE Q ss_conf 664545665400003688876221479940-7998507522555542057747789999999999998708-----7378 Q Ver_Hs_NP_0061 197 RRGPLTSGSDEENVALPLGDNVLTHNLGIP-VLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYG-----AALI 270 (492) Q Consensus 197 r~~~~~s~~de~~v~lPLgeg~Lt~NLGiP-i~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YG-----AsLi 270 (492) .+-..+|++ ++||+.|.|.++ .+|.|+++..-+|.++-++| +.+| T Consensus 112 ---------------------~~~~~~g~~~iiv~iNKiDlv~--------d~~~~~~~~~~~~~~l~~~~~~~~~~pii 162 (196) T d1d2ea3 112 ---------------------LLARQIGVEHVVVYVNKADAVQ--------DSEMVELVELEIRELLTEFGYKGEETPII 162 (196) T ss_dssp ---------------------HHHHHTTCCCEEEEEECGGGCS--------CHHHHHHHHHHHHHHHHHTTSCTTTSCEE T ss_pred ---------------------HHHHHCCCCEEEEEECCCCCCC--------CHHHHHHHHHHHHHHHHHCCCCCCCEEEE T ss_conf ---------------------9999648934898604578888--------78898876446677776427886432058 Q ss_pred EECCCCC----------CCHHHHHHHHHHHH Q ss_conf 8456663----------56799999998887 Q Ver_Hs_NP_0061 271 YTSVKEE----------KNLDLLYKYIVHKT 291 (492) Q Consensus 271 YTS~ke~----------kNl~lLykYi~Hrl 291 (492) ++|.+.. .+++-|...+.-.+ T Consensus 163 piSA~~g~~~~~~~~~~~~i~~Lldai~~~i 193 (196) T d1d2ea3 163 VGSALCALEQRDPELGLKSVQKLLDAVDTYI 193 (196) T ss_dssp ECCHHHHHTTCCTTTTHHHHHHHHHHHHHHS T ss_pred EHHCCCCCCCCCCCCCCCCHHHHHHHHHHHC T ss_conf 7100002112673334368789999998527 No 43 >d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=97.51 E-value=6.2e-05 Score=48.46 Aligned_columns=157 Identities=22% Q ss_pred EEEEEECCCCCHHHHHHHH----------------HCCCCCCCCCCCEEEEEECCCCCCC------------CCCCCCEE Q ss_conf 4888607885489999986----------------2013367874310335302121347------------30010058 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKL----------------QGAEHGKKGRGLEYLYLSVHDEDRD------------DHTRCNVW 107 (492) Q Consensus 56 nILvLG~~~sGKttLi~~L----------------q~~e~~kkg~gLeY~Yl~V~D~drD------------d~~R~~Vw 107 (492) ||.++|.-++|||||+.+| .......++.---+.++|-..+.|+ +.-...+= T Consensus 8 Ni~viGHVDhGKTTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~Er~rgiti~~~~~~~~~~~~~i~ 87 (239) T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYQVT 87 (239) T ss_dssp EEEEEECTTSCHHHHHHHHHHHHSCSSHHHHHHHHHHGGGGSSSCCCHHHHHHHHHHHHHTTCCCSCSCEEEECSSEEEE T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCCEEECCEEEECCCCCEEE T ss_conf 89999631688689999999983774446888887666542002232024316875300137312101024304583689 Q ss_pred EECCCCCCCCCCCCCCCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC Q ss_conf 85676021135322477343302102000212032479999999999999999724888899999999999998620350 Q Ver_Hs_NP_0061 108 ILDGDLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEP 187 (492) Q Consensus 108 iLdg~~~~~~LLk~al~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep 187 (492) ++|-+ +|..+++..++.-+..+..|+++-.-...+.-=-+.+. ++++.+ T Consensus 88 iIDtP-GH~df~~~mi~g~~~~D~aiLVVda~~g~~~~~~~~~~--------------------Qt~eh~---------- 136 (239) T d1f60a3 88 VIDAP-GHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDG--------------------QTREHA---------- 136 (239) T ss_dssp EEECC-CCTTHHHHHHHSSSCCSEEEEEEECSHHHHHHHTCTTS--------------------HHHHHH---------- T ss_pred EEECC-CCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHH--------------------HHHHHH---------- T ss_conf 98578-76303678887653402678997256644232201438--------------------999999---------- Q ss_pred HHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCE-EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC Q ss_conf 005777767664545665400003688876221479940-7998507522555542057747789999999999998708 Q Ver_Hs_NP_0061 188 EEGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIP-VLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYG 266 (492) Q Consensus 188 ~~~~~gs~~r~~~~~s~~de~~v~lPLgeg~Lt~NLGiP-i~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YG 266 (492) .+-..||++ |+|++.|.|.+ +|.++.|+-|.+-++.|+.+.| T Consensus 137 ------------------------------~~~~~lgv~~iiv~iNKmD~v-------~~~~~r~~~i~~ei~~~l~~~g 179 (239) T d1f60a3 137 ------------------------------LLAFTLGVRQLIVAVNKMDSV-------KWDESRFQEIVKETSNFIKKVG 179 (239) T ss_dssp ------------------------------HHHHHTTCCEEEEEEECGGGG-------TTCHHHHHHHHHHHHHHHHHHT T ss_pred ------------------------------HHHHHCCCCEEEEEEECCCCC-------CCCHHHHHHHHHHHHHHHHHCC T ss_conf ------------------------------999971898389998236887-------7788899999999988887518 Q ss_pred -----CEEEEECCCCCCCH Q ss_conf -----73788456663567 Q Ver_Hs_NP_0061 267 -----AALIYTSVKEEKNL 280 (492) Q Consensus 267 -----AsLiYTS~ke~kNl 280 (492) +..|-.|.....|+ T Consensus 180 ~~~~~~~~iPiSa~~G~Ni 198 (239) T d1f60a3 180 YNPKTVPFVPISGWNGDNM 198 (239) T ss_dssp CCGGGCCEEECCTTTCBTT T ss_pred CCCCCEEEEEEECCCCCCC T ss_conf 8887700787525645755 No 44 >d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima} Probab=97.47 E-value=9.1e-05 Score=47.35 Aligned_columns=150 Identities=23% Q ss_pred EEEEECCCCCHHHHHHHHHCCC----CCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHE- Q ss_conf 8886078854899999862013----36787431033530212134730010058856760211353224773433021- Q Ver_Hs_NP_0061 57 ILVFGEDGSGKTTLMTKLQGAE----HGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPET- 131 (492) Q Consensus 57 ILvLG~~~sGKttLi~~Lq~~e----~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~T- 131 (492) |+++|..++|||||+.+|-+.+ ....|...+.....+...+.....---.-+......+.......-....+.++ T Consensus 3 I~liG~~~~GKSTLin~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 82 (160) T d1xzpa2 3 MVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSETNDLVERLGIERTLQEIEKAD 82 (160) T ss_dssp EEEECCHHHHTCHHHHHHHHHTBCCCCCSSCCSSCSCCEEEEETTEEEEEEESSCCCSSCCTTCCCCCHHHHHHHHHHCS T ss_pred EEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCC T ss_conf 88983399988899999846742143011110100001001115302577631011113430122333678999986354 Q ss_pred EEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCC Q ss_conf 02000212032479999999999999999724888899999999999998620350005777767664545665400003 Q Ver_Hs_NP_0061 132 LVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVA 211 (492) Q Consensus 132 lVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~ 211 (492) ++++++|.++||. ++...|...++ T Consensus 83 ~ii~vvD~~~~~~--~~~~~~~~~l~------------------------------------------------------ 106 (160) T d1xzpa2 83 IVLFVLDASSPLD--EEDRKILERIK------------------------------------------------------ 106 (160) T ss_dssp EEEEEEETTSCCC--HHHHHHHHHHT------------------------------------------------------ T ss_pred EEEEEECCCCCCC--HHHHHHHHHHC------------------------------------------------------ T ss_conf 1478641521114--56788886413------------------------------------------------------ Q ss_pred CCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH Q ss_conf 68887622147994079985075225555420577477899999999999987087378845666356799999998 Q Ver_Hs_NP_0061 212 LPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIV 288 (492) Q Consensus 212 lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~ 288 (492) ..|+++|+.|+|.. .....++... -+..+.-+|+||++...+++-|+..|. T Consensus 107 ------------~~~~iiv~NK~Dl~------~~~~~~~~~~--------~~~~~~~i~~iSa~~g~gi~eL~~~i~ 157 (160) T d1xzpa2 107 ------------NKRYLVVINKVDVV------EKINEEEIKN--------KLGTDRHMVKISALKGEGLEKLEESIY 157 (160) T ss_dssp ------------TSSEEEEEEECSSC------CCCCHHHHHH--------HHTCSTTEEEEEGGGTCCHHHHHHHHH T ss_pred ------------CCCEEEEEECCCCC------CCCCHHHHHH--------HHCCCCCEEEEECCCCCCHHHHHHHHH T ss_conf ------------67558997256667------8346789999--------717899779985256878789999984 No 45 >d1exma3 c.37.1.8 (A:3-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus} Probab=97.42 E-value=0.00022 Score=44.79 Aligned_columns=143 Identities=27% Q ss_pred EEEEEECCCCCHHHHHHHHHCCC--CCCCCCCCEEEEEECCCCCCC------------CCCCCCEEEECCCCCCCCCCCC Q ss_conf 48886078854899999862013--367874310335302121347------------3001005885676021135322 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAE--HGKKGRGLEYLYLSVHDEDRD------------DHTRCNVWILDGDLYHKGLLKF 121 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e--~~kkg~gLeY~Yl~V~D~drD------------d~~R~~VwiLdg~~~~~~LLk~ 121 (492) ||.|+|..++|||||+.+|-+.. ..+++..-++.++|-..+.|. ......+-++|-+ +|..+++. T Consensus 11 nI~iiGhvd~GKSTL~~~Ll~~~~~~~~~~~~~~~~~~D~~~~E~~rgiTi~~~~~~~~~~~~~i~~iDtP-Gh~~f~~~ 89 (210) T d1exma3 11 NVGTIGHVDHGKTTLTAALTFVTAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCP-GHADYIKN 89 (210) T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHHCTTCCCCCHHHHSCSHHHHHHTSCCSCEEEEEECSSCEEEEEECC-CSGGGHHH T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHCCCEEEEEEEEEEECCCEEEEECCC-CHHHHHHH T ss_conf 89998423888789999998875210011011221102455012113503423689984115148873277-46889999 Q ss_pred CCCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCC Q ss_conf 47734330210200021203247999999999999999972488889999999999999862035000577776766454 Q Ver_Hs_NP_0061 122 AVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPL 201 (492) Q Consensus 122 al~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~ 201 (492) .+..-...+..|+++---.-+ +.|-++-+.++. T Consensus 90 ~~~~~~~aD~aiLVVda~~G~---~~qt~~~l~~~~-------------------------------------------- 122 (210) T d1exma3 90 MITGAAQMDGAILVVSAADGP---MPQTREHILLAR-------------------------------------------- 122 (210) T ss_dssp HHHHHTTCSSEEEEEETTTCS---CHHHHHHHHHHH-------------------------------------------- T ss_pred HHHHHHHHCEEEEEECCCCCC---CHHHHHHHHHHH-------------------------------------------- T ss_conf 999877633443342143322---024689999999-------------------------------------------- Q ss_pred CCCCCCHHCCCCCCCCCEECCCCCE-EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC-----CEEEEECC Q ss_conf 5665400003688876221479940-7998507522555542057747789999999999998708-----73788456 Q Ver_Hs_NP_0061 202 TSGSDEENVALPLGDNVLTHNLGIP-VLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYG-----AALIYTSV 274 (492) Q Consensus 202 ~s~~de~~v~lPLgeg~Lt~NLGiP-i~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YG-----AsLiYTS~ 274 (492) .+|+| ++|++.|.|.+ + .++.|+.|...+|.++-+|| +..|..|. T Consensus 123 --------------------~~g~~~iiv~iNKiDlv-------~-~~~~~~~i~~ev~~~l~~~~~~~~~ipii~iSa 173 (210) T d1exma3 123 --------------------QVGVPYIVVFMNKVDMV-------D-DPELLDLVEMEVRDLLNQYEFPGDEVPVIRGSA 173 (210) T ss_dssp --------------------HTTCCCEEEEEECGGGC-------C-CHHHHHHHHHHHHHHHHHTTSCTTTSCEEECCH T ss_pred --------------------HCCCCCEEEEEECCCCC-------C-CHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECH T ss_conf --------------------72897168996135888-------8-589999999999986531388853221686001 No 46 >d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis} Probab=97.30 E-value=9.5e-05 Score=47.22 Aligned_columns=170 Identities=19% Q ss_pred EEEEEECCCCCHHHHHHHHHCCC---CCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEE Q ss_conf 48886078854899999862013---367874310335302121347300100588567602113532247734330210 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAE---HGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETL 132 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e---~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~Tl 132 (492) .|-++|..++|||||+.+|.+.+ ....+...+.....+...+......+..|-......................-+ T Consensus 3 ~I~iiG~~nvGKSsLin~l~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 82 (185) T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRV 82 (185) T ss_dssp CEEEESSTTSSHHHHHHHSEEECCEESSTTSSCCCCCEEEEECSSSCEEEEEEHHHHHHHTTCTTTTHHHHHHHHHHCCE T ss_pred EEEEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEEEEEEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH T ss_conf 16887469986899999985685213204664025788788751671110012344321001235688999886412235 Q ss_pred EEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCC Q ss_conf 20002120324799999999999999997248888999999999999986203500057777676645456654000036 Q Ver_Hs_NP_0061 133 VIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVAL 212 (492) Q Consensus 133 VvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~l 212 (492) +++++|.+.+ .-......|..++..+..... T Consensus 83 i~~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~------------------------------------------------ 113 (185) T d1lnza2 83 IVHVIDMSGL-EGRDPYDDYLTINQELSEYNL------------------------------------------------ 113 (185) T ss_dssp EEEEEESSCS-SCCCHHHHHHHHHHHHHHSCS------------------------------------------------ T ss_pred HHHHHHHCCC-CCCCCHHHHHHHHHHHHHHHH------------------------------------------------ T ss_conf 6555320002-466617899999877777766------------------------------------------------ Q ss_pred CCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH Q ss_conf 88876221479940799850752255554205774778999999999999870873788456663567999999988872 Q Ver_Hs_NP_0061 213 PLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTY 292 (492) Q Consensus 213 PLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi~Hrly 292 (492) ....+|+++|++|+|.. -..++.+.+.+.+ .-+...|-||++...+++-|...|...+. T Consensus 114 --------~~~~~~~i~v~nK~Dl~--------~~~~~~~~~~~~~-----~~~~~v~~~SA~tg~Gi~el~~~i~~~l~ 172 (185) T d1lnza2 114 --------RLTERPQIIVANKMDMP--------EAAENLEAFKEKL-----TDDYPVFPISAVTREGLRELLFEVANQLE 172 (185) T ss_dssp --------STTTSCBCBEEECTTST--------THHHHHHHHHHHC-----CSCCCBCCCSSCCSSTTHHHHHHHHHHHT T ss_pred --------HHHHHHHHHHHHHHCCC--------CHHHHHHHHHHHH-----CCCCCEEEEECCCCCCHHHHHHHHHHHHH T ss_conf --------54211123443111011--------1377899999984-----17996899735778888899999999734 Q ss_pred CCC Q ss_conf 777 Q Ver_Hs_NP_0061 293 GFH 295 (492) Q Consensus 293 gfp 295 (492) ..| T Consensus 173 ~~~ 175 (185) T d1lnza2 173 NTP 175 (185) T ss_dssp SCC T ss_pred CCC T ss_conf 078 No 47 >d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe)} Probab=96.80 E-value=0.0049 Score=36.02 Aligned_columns=156 Identities=24% Q ss_pred EEEEEECCCCCHHHHHHHH----------------HCCCCCCCCCCCEEEEEECCCCCCCCCCCCCE-----------EE Q ss_conf 4888607885489999986----------------20133678743103353021213473001005-----------88 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKL----------------QGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNV-----------WI 108 (492) Q Consensus 56 nILvLG~~~sGKttLi~~L----------------q~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~V-----------wi 108 (492) ||.|+|.-++|||||+.+| .+.....+...-.|.+++-..+.|...-.+.. +. T Consensus 26 nI~iiGhVd~GKSTL~~~Ll~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~er~rg~ti~~~~~~~~~~~~~i~ 105 (245) T d1r5ba3 26 NIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFS 105 (245) T ss_dssp EEEEEECGGGTHHHHHHHHHHHTTSSCHHHHHHHHHHTCC----------------------------CCEEECSSEEEE T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCCCCCCCCCCEEECCCCEEE T ss_conf 79998414788688999999972663267899987777650333221000004545310025554332205402575047 Q ss_pred ECCCCCCCCCCCCCCCCCCHHHEEEEEHHHHCCH----HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC Q ss_conf 5676021135322477343302102000212032----479999999999999999724888899999999999998620 Q Ver_Hs_NP_0061 109 LDGDLYHKGLLKFAVSAESLPETLVIFVADMSRP----WTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDY 184 (492) Q Consensus 109 Ldg~~~~~~LLk~al~~~si~~TlVvI~lD~s~P----W~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey 184 (492) +=--|+|..+++..+..-++.+..|+++--..-. +....|+++-..++. T Consensus 106 iIDtPGH~~f~~~~~~g~~~~D~AiLVVdA~~G~~~~~~~~~~qtkeh~~~~~--------------------------- 158 (245) T d1r5ba3 106 LLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLAR--------------------------- 158 (245) T ss_dssp ECCCC-----------CTTSCSEEEEEEECSTTHHHHTTSTTCCHHHHHHHHH--------------------------- T ss_pred EEECCCCCHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH--------------------------- T ss_conf 86077762146889988655121478887678874012104689999999999--------------------------- Q ss_pred CCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCE-EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH Q ss_conf 350005777767664545665400003688876221479940-7998507522555542057747789999999999998 Q Ver_Hs_NP_0061 185 MEPEEGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIP-VLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCL 263 (492) Q Consensus 185 ~ep~~~~~gs~~r~~~~~s~~de~~v~lPLgeg~Lt~NLGiP-i~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL 263 (492) .||+| ++|+++|.|.. .-+|.++.|+-|..-+..|.- T Consensus 159 -------------------------------------~l~i~~~IV~vNKiD~~-----~~~~~~~~~~~i~~~i~~~l~ 196 (245) T d1r5ba3 159 -------------------------------------TQGINHLVVVINKMDEP-----SVQWSEERYKECVDKLSMFLR 196 (245) T ss_dssp -------------------------------------HTTCSSEEEEEECTTST-----TCSSCHHHHHHHHHHHHHHHH T ss_pred -------------------------------------HHCCCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHHHH T ss_conf -------------------------------------80799469998413777-----655027899999999999999 Q ss_pred HCCC-------EEEEECCCCCCCH Q ss_conf 7087-------3788456663567 Q Ver_Hs_NP_0061 264 QYGA-------ALIYTSVKEEKNL 280 (492) Q Consensus 264 ~YGA-------sLiYTS~ke~kNl 280 (492) +.++ ..|-+|.....|+ T Consensus 197 ~~~~~~~~~~v~~IPiSA~~G~ni 220 (245) T d1r5ba3 197 RVAGYNSKTDVKYMPVSAYTGQNV 220 (245) T ss_dssp HHHCCCHHHHEEEEECBTTTTBTT T ss_pred HHHCCCCCCCEEEEEEECCCCCCC T ss_conf 850557666633887006778854 No 48 >d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum} Probab=96.76 E-value=0.0023 Score=38.17 Aligned_columns=167 Identities=18% Q ss_pred CE--EEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCC--------------CCCEEEECCCCCCCCC Q ss_conf 64--8886078854899999862013367874310335302121347300--------------1005885676021135 Q Ver_Hs_NP_0061 55 KN--ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHT--------------RCNVWILDGDLYHKGL 118 (492) Q Consensus 55 Kn--ILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~--------------R~~VwiLdg~~~~~~L 118 (492) +| |.|+|..++|||||+.+|-+........+--..-....+....... ....+.+-..++|... T Consensus 4 r~p~IaiiG~~n~GKSTL~n~L~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 83 (227) T d1g7sa4 4 RSPIVSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRETLPGLFFIDTPGHEAF 83 (227) T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHHHHSCC----CCCBTTEEEEEHHHHHHHSCGGGGGCGGGGTCCEEEEECCCTTSCC T ss_pred CCCEEEEEECCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCEEEEECCCHHHHHH T ss_conf 58478998216987789999987201000035541023332331331124156640046898516706862475168999 Q ss_pred CCCCCCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCC Q ss_conf 32247734330210200021203247999999999999999972488889999999999999862035000577776766 Q Ver_Hs_NP_0061 119 LKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRR 198 (492) Q Consensus 119 Lk~al~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~ 198 (492) .......-...+.+++ ++|-.+.+...+.--. T Consensus 84 ~~~~~~~~~~~d~~l~-vida~~g~~~~~~~~~----------------------------------------------- 115 (227) T d1g7sa4 84 TTLRKRGGALADLAIL-IVDINEGFKPQTQEAL----------------------------------------------- 115 (227) T ss_dssp TTSBCSSSBSCSEEEE-EEETTTCCCHHHHHHH----------------------------------------------- T ss_pred HHHHHHHHHHCCEEEE-EEECCCHHHHHHHHHH----------------------------------------------- T ss_conf 9999998875562689-9726310136789999----------------------------------------------- Q ss_pred CCCCCCCCCHHCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC------------ Q ss_conf 45456654000036888762214799407998507522555542057747789999999999998708------------ Q Ver_Hs_NP_0061 199 GPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYG------------ 266 (492) Q Consensus 199 ~~~~s~~de~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YG------------ 266 (492) .+-...|+|+++|++|.|.+...... ...+....+-.+..+.....+. T Consensus 116 -------------------~~l~~~~~p~iiviNKiD~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (227) T d1g7sa4 116 -------------------NILRMYRTPFVVAANKIDRIHGWRVH-EGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEE 175 (227) T ss_dssp -------------------HHHHHTTCCEEEEEECGGGSTTCCCC-TTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHT T ss_pred -------------------HHHHHCCCCEEEEEECCCCCCCCHHH-HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf -------------------99996289389998644677864567-8899999733221356777654389999999984 Q ss_pred ----------------CEEEEECCCCCCCHHHHHHHHHH Q ss_conf ----------------73788456663567999999988 Q Ver_Hs_NP_0061 267 ----------------AALIYTSVKEEKNLDLLYKYIVH 289 (492) Q Consensus 267 ----------------AsLiYTS~ke~kNl~lLykYi~H 289 (492) ..+|.+|++...|++-|..+|++ T Consensus 176 ~~~~~~~~~~~~~~~~~~iv~vSA~tg~gi~eLle~i~~ 214 (227) T d1g7sa4 176 GFESERFDRVTDFASQVSIIPISAITGEGIPELLTMLMG 214 (227) T ss_dssp TCEEEEGGGCSCTTTEEEEEECCTTTCTTHHHHHHHHHH T ss_pred HCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 111223222343237855688306679998999999999 No 49 >d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae)} Probab=96.68 E-value=0.0036 Score=36.86 Aligned_columns=126 Identities=20% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEE Q ss_conf 48886078854899999862013367874310335302121347300100588567602113532247734330210200 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIF 135 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI 135 (492) .|+++|..++|||||+.+|.+.+. .....-.-.+..+..+...-. +|-+.|...+..++.-......-.-..||+ T Consensus 5 ~V~i~G~~~~GKTsLl~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~----liDtpG~~~~~~~~~~~~~~~~~~~d~iI~ 79 (209) T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTDSV-RPTVVSQEPLSAADYDGSGVT----LVDFPGHVKLRYKLSDYLKTRAKFVKGLIF 79 (209) T ss_dssp EEEEECSTTSSHHHHHHHHHHSSC-CCBCCCSSCEEETTGGGSSCE----EEECCCCGGGTHHHHHHHHHHGGGEEEEEE T ss_pred EEEEEECCCCCHHHHHHHHHCCCC-CCCEECCEEEEEEEECCEEEE----EEECCCCHHHHHHHHHHHHHHCCCCEEEEE T ss_conf 899983699978999999846831-330201004889863677999----987457223689999999863367328999 Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCC Q ss_conf 02120324799999999999999997248888999999999999986203500057777676645456654000036888 Q Ver_Hs_NP_0061 136 VADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVALPLG 215 (492) Q Consensus 136 ~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLg 215 (492) ++|-+..=.-+++..+|..=+...+.... T Consensus 80 VvDs~~~~~~~~~~~~~l~~il~~~~~~~--------------------------------------------------- 108 (209) T d1nrjb_ 80 MVDSTVDPKKLTTTAEFLVDILSITESSC--------------------------------------------------- 108 (209) T ss_dssp EEETTSCTTCCHHHHHHHHHHHHHHHHHS--------------------------------------------------- T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHHH--------------------------------------------------- T ss_conf 97537774237999999999999987543--------------------------------------------------- Q ss_pred CCCEECCCCCEEEEEEECCCH---------HHHHHHC Q ss_conf 762214799407998507522---------5555420 Q Ver_Hs_NP_0061 216 DNVLTHNLGIPVLVVCTKCDA---------VSVLEKE 243 (492) Q Consensus 216 eg~Lt~NLGiPi~VVctKsD~---------ie~LeKe 243 (492) .-++|++|||.|+|. .+.||+| T Consensus 109 ------~~~vPiii~~NK~Dl~~a~~~~~i~~~le~e 139 (209) T d1nrjb_ 109 ------ENGIDILIACNKSELFTARPPSKIKDALESE 139 (209) T ss_dssp ------TTCCCEEEEEECTTSTTCCCHHHHHHHHHHH T ss_pred ------HCCCCEEEEEECCCCCCCCCHHHHHHHHHHH T ss_conf ------1589389998554778898989999999998 No 50 >d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus)} Probab=96.54 E-value=0.026 Score=31.22 Aligned_columns=169 Identities=19% Q ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCC---CCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEE Q ss_conf 48886078854899999862013367874---310335302121347300100588567602113532247734330210 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKLQGAEHGKKGR---GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETL 132 (492) Q Consensus 56 nILvLG~~~sGKttLi~~Lq~~e~~kkg~---gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~Tl 132 (492) +|.|.|+.++||||||.+|-|.....++. |.-=+-.+...--..+.-.+.+|=+-|=-..+.-..-.+....+.+.- T Consensus 58 ~IAIiG~snaGKSSLINAL~G~~~~e~~~a~tgv~~tT~~~~~y~~~~~~~v~LvDTPGig~~~~~~~~yL~~~~~~~~D 137 (400) T d1tq4a_ 58 NVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWDLPGIGSTNFPPDTYLEKMKFYEYD 137 (400) T ss_dssp EEEEEECTTSSHHHHHHHHHTCCTTSTTSCCCCC----CCCEEEECSSCTTEEEEECCCGGGSSCCHHHHHHHTTGGGCS T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCC T ss_conf 89987248985999999884688555666668898875544134446886068987388986354489999999754872 Q ss_pred EEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHCCC Q ss_conf 20002120324799999999999999997248888999999999999986203500057777676645456654000036 Q Ver_Hs_NP_0061 133 VIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENVAL 212 (492) Q Consensus 133 VvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v~l 212 (492) ++|+..=.++ .+...++.+..++ T Consensus 138 l~Iivss~~~----------------------------te~D~~la~~I~~----------------------------- 160 (400) T d1tq4a_ 138 FFIIISATRF----------------------------KKNDIDIAKAISM----------------------------- 160 (400) T ss_dssp EEEEEESSCC----------------------------CHHHHHHHHHHHH----------------------------- T ss_pred EEEEECCCCC----------------------------CHHHHHHHHHHHH----------------------------- T ss_conf 7998738887----------------------------5778999999997----------------------------- Q ss_pred CCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC-------CEEEEECCCCCCCHH--HH Q ss_conf 888762214799407998507522555542057747789999999999998708-------737884566635679--99 Q Ver_Hs_NP_0061 213 PLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYG-------AALIYTSVKEEKNLD--LL 283 (492) Q Consensus 213 PLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YG-------AsLiYTS~ke~kNl~--lL 283 (492) .|.|+++|++|.|....-|++..=+.-.-.-++|.+|..|.+.- .-+|-.|..+...+| .| T Consensus 161 ----------~gK~fiiV~nKiD~dl~~e~~~k~~~f~~ek~Lq~Ir~~~~~~l~~~g~~~p~VFlvS~~~l~~ydF~~L 230 (400) T d1tq4a_ 161 ----------MKKEFYFVRTKVDSDITNEADGEPQTFDKEKVLQDIRLNCVNTFRENGIAEPPIFLLSNKNVCHYDFPVL 230 (400) T ss_dssp ----------TTCEEEEEECCHHHHHHHHHTTCCTTCCHHHHHHHHHHHHHHHHHHTTCSSCCEEECCTTCTTSTTHHHH T ss_pred ----------CCCCEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHH T ss_conf ----------3898999973455334884441555577768999999999999986489888467404777210570789 Q ss_pred HHHHHHHH Q ss_conf 99998887 Q Ver_Hs_NP_0061 284 YKYIVHKT 291 (492) Q Consensus 284 ykYi~Hrl 291 (492) ..-+.|.| T Consensus 231 ~~tL~~~L 238 (400) T d1tq4a_ 231 MDKLISDL 238 (400) T ss_dssp HHHHHHHS T ss_pred HHHHHHHH T ss_conf 99999970 No 51 >d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum)} Probab=96.23 E-value=0.0092 Score=34.23 Aligned_columns=154 Identities=21% Q ss_pred HHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHC------CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEC- Q ss_conf 999999817862278876488860788548999998620------1336787431033530212134730010058856- Q Ver_Hs_NP_0061 38 SILSEVSTRARSKLPSGKNILVFGEDGSGKTTLMTKLQG------AEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILD- 110 (492) Q Consensus 38 sil~eV~~~~~~klp~~KnILvLG~~~sGKttLi~~Lq~------~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLd- 110 (492) ..|-+.-..-+.+-++.-+|+++|..++|||||+.+|-| ...+.-.+...+.+..+.+.. +-++| T Consensus 16 ~~l~~~l~~~k~~~~~~l~I~liG~~g~GKSSliN~ilg~~~~~~s~~~~~T~~~~~~~~~~~g~~--------i~vIDT 87 (257) T d1h65a_ 16 TKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFT--------LNIIDT 87 (257) T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHHTSCCSCCCSSSCCCSSCEEEEEEETTEE--------EEEEEC T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEECCCEE--------EEEEEC T ss_conf 999999986432033776799970689848999888746742033378885100388997318758--------999866 Q ss_pred -C-------CCCCCCCCCCCCCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH Q ss_conf -7-------60211353224773433021020002120324799999999999999997248888999999999999986 Q Ver_Hs_NP_0061 111 -G-------DLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQ 182 (492) Q Consensus 111 -g-------~~~~~~LLk~al~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~q 182 (492) | +-.....++.++....+-=.|+|+-+|.++. .+..+.+.+..+ T Consensus 88 PG~~~~~~~~~~~~~~i~~~l~~~~~d~iLlVi~~~~~r~----------------------------~~~d~~~~~~i~ 139 (257) T d1h65a_ 88 PGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRV----------------------------DNLDKLVAKAIT 139 (257) T ss_dssp CCSEETTEECHHHHHHHHHHTTTCEECEEEEEEESSCCCC----------------------------CHHHHHHHHHHH T ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCC----------------------------CHHHHHHHHHHH T ss_conf 8877721340899999999861799928999984798623----------------------------889999999999 Q ss_pred HCCCCHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCEECCCCCEEEEEEECCCHH--HHHHHCCCCCHHHHHHHHHHHHH Q ss_conf 2035000577776766454566540000368887622147994079985075225--55542057747789999999999 Q Ver_Hs_NP_0061 183 DYMEPEEGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAV--SVLEKEHDYRDEHLDFIQSHLRR 260 (492) Q Consensus 183 ey~ep~~~~~gs~~r~~~~~s~~de~~v~lPLgeg~Lt~NLGiPi~VVctKsD~i--e~LeKe~~y~dE~fD~Iqq~LR~ 260 (492) + ......--+++||.||+|.+ +...-+ .|..+..+.++++++. T Consensus 140 ~----------------------------------~fg~~~~~~~IiV~tk~D~~~~d~~~~e-~~~~~~~~~L~~~i~~ 184 (257) T d1h65a_ 140 D----------------------------------SFGKGIWNKAIVALTHAQFSPPDGLPYD-EFFSKRSEALLQVVRS 184 (257) T ss_dssp H----------------------------------HHCGGGGGGEEEEEECCSCCCGGGCCHH-HHHHHHHHHHHHHHHH T ss_pred H----------------------------------HCCHHHHCCEEEEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHH T ss_conf 8----------------------------------4074443588999973224775678789-9998778989999999 Q ss_pred HH Q ss_conf 99 Q Ver_Hs_NP_0061 261 FC 262 (492) Q Consensus 261 ~c 262 (492) .+ T Consensus 185 ~~ 186 (257) T d1h65a_ 185 GA 186 (257) T ss_dssp HT T ss_pred HH T ss_conf 85 No 52 >d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus} Probab=94.08 E-value=0.016 Score=32.72 Aligned_columns=33 Identities=36% Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 887648886078854899999862013367874 Q Ver_Hs_NP_0061 52 PSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 52 p~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) |.|+.|.++|.+++|||||++.|-|...+..|+ T Consensus 4 p~Geii~lvG~sGaGKTTl~~~L~gll~p~~G~ 36 (207) T d1okkd2 4 PKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKK 36 (207) T ss_dssp CSSSEEEEECSTTSSHHHHHHHHHHHHHTTTCC T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCE T ss_conf 995389987589997899999987211778876 No 53 >d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus} Probab=93.57 E-value=0.24 Score=24.97 Aligned_columns=170 Identities=14% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCC--EEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC Q ss_conf 2788764888607885489999986201336787431--03353021213473001005885676021135322477343 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGL--EYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAES 127 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gL--eY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~s 127 (492) .++.|.-+-++|.+++|||||++.|.|...+..|.-+ +--.-...-.......|-=-|+-+.. .+.+.-+ T Consensus 27 ~i~~Gei~~liG~nGaGKSTll~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~--------~l~~~~t 98 (242) T d1oxxk2 27 NIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTW--------ALYPNLT 98 (242) T ss_dssp EECTTCEEEEECSCHHHHHHHHHHHHTSSCCSEEEEEETTEEEEETTEESSCGGGSCEEEEETTS--------CCCTTSC T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEECC--------CCCCCCC T ss_conf 56487189997278986899999985168887777898771244577433117753530443011--------2275765 Q ss_pred HHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCC Q ss_conf 30210200021203247999999999999999972488889999999999999862035000577776766454566540 Q Ver_Hs_NP_0061 128 LPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDE 207 (492) Q Consensus 128 i~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de 207 (492) +.+.+..-+..+..++..+++.-.++.-+-+.-+.++..+..+---+++-+.--+. T Consensus 99 v~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~iAra------------------------ 154 (242) T d1oxxk2 99 AFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGAQQQRVALARA------------------------ 154 (242) T ss_dssp HHHHHHGGGTTSSCCHHHHHHHHHHHHHHTTCGGGTTSCGGGSCHHHHHHHHHHHH------------------------ T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHH------------------------ T ss_conf 99999988753001368899999999984063577652113586678999999998------------------------ Q ss_pred HHCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEC Q ss_conf 000368887622147994079985075225555420577477899999999999987087378845 Q Ver_Hs_NP_0061 208 ENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTS 273 (492) Q Consensus 208 ~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS 273 (492) .+++.|.+-.-|=-.+..-..-.-|...|+++.-++|.++|++| T Consensus 155 ----------------------l~~~P~iLlLDEPt~gLD~~~~~~i~~~i~~l~~~~g~tIi~vs 198 (242) T d1oxxk2 155 ----------------------LVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVS 198 (242) T ss_dssp ----------------------HTTCCSEEEEESTTTTSCGGGHHHHHHHHHHHHHHHCCEEEEEE T ss_pred ----------------------HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEE T ss_conf ----------------------62699689972750013789999999999999985398899996 No 54 >d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus} Probab=92.78 E-value=2.3 Score=18.54 Aligned_columns=146 Identities=25% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC--CH Q ss_conf 7887648886078854899999862013367874310335302121347300100588567602113532247734--33 Q Ver_Hs_NP_0061 51 LPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAE--SL 128 (492) Q Consensus 51 lp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~--si 128 (492) +|.|.-++|.|..++|||+|.-.+ ....+++.+ .. T Consensus 33 l~~G~i~~i~G~pGsGKT~l~l~~-------------------------------------------a~~~~~~~~~~~~ 69 (254) T d1pzna2 33 IETQAITEVFGEFGSGKTQLAHTL-------------------------------------------AVMVQLPPEEGGL 69 (254) T ss_dssp EESSEEEEEEESTTSSHHHHHHHH-------------------------------------------HHHTTSCGGGTSC T ss_pred CCCCEEEEEECCCCCCHHHHHHHH-------------------------------------------HHHHHHCCCCCCC T ss_conf 546748999648875289999999-------------------------------------------9999720212345 Q ss_pred HHEEEEEHHHHCCHHHHHHHHHHHHHH-HHHHHHHC----CCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCC Q ss_conf 021020002120324799999999999-99999724----8888999999999999986203500057777676645456 Q Ver_Hs_NP_0061 129 PETLVIFVADMSRPWTVMESLQKWASV-LREHIDKM----KIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTS 203 (492) Q Consensus 129 ~~TlVvI~lD~s~PW~~m~qL~~Wi~v-Lr~hi~~L----~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s 203 (492) ....+.|..+.+-+.-.++++.+...+ +.+.++.+ -....+.............+ T Consensus 70 ~~~vlyi~~e~~~~~~rl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 129 (254) T d1pzna2 70 NGSVIWIDTENTFRPERIREIAQNRGLDPDEVLKHIYVARAFNSNHQMLLVQQAEDKIKE-------------------- 129 (254) T ss_dssp SCEEEEEESSSCCCHHHHHHHHHTTTCCHHHHGGGEEEEECCSHHHHHHHHHHHHHHHHH-------------------- T ss_pred CCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH-------------------- T ss_conf 735899725551358999999987188989986444310124643146679999999999-------------------- Q ss_pred CCCCHHCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHH---HHHHHHHHHHHHHHCCCEEEEEC Q ss_conf 65400003688876221479940799850752255554205774778---99999999999987087378845 Q Ver_Hs_NP_0061 204 GSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEH---LDFIQSHLRRFCLQYGAALIYTS 273 (492) Q Consensus 204 ~~de~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~---fD~Iqq~LR~~cL~YGAsLiYTS 273 (492) .+..+-++-++|+=.=+..+...+...+.-.+. +..+.+.|+++|-.|+++.+.|+ T Consensus 130 --------------~~~~~~~~~lvVIDsi~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~la~~~~~~vv~~~ 188 (254) T d1pzna2 130 --------------LLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLADLHRLANLYDIAVFVTN 188 (254) T ss_dssp --------------SSSSSSCEEEEEEETSSTTHHHHCCSTTTHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE T ss_pred --------------HHHHCCCCEEEEEECHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE T ss_conf --------------98721793289971002210111036774358999999999999999985598799980 No 55 >d1fts_2 c.37.1.10 (285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli} Probab=92.28 E-value=0.041 Score=29.96 Aligned_columns=35 Identities=29% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 27887648886078854899999862013367874 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) +.++|+-|.++|.+++|||||+..|-|.-.+..|+ T Consensus 5 ~i~~g~vv~ivG~sGsGKSTll~~L~g~~~~~~G~ 39 (211) T d1fts_2 5 EGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKS 39 (211) T ss_dssp CSCTTEEEEEECCTTSSHHHHHHHHHHHHHTTTCC T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCE T ss_conf 55887589997379997899999987330778976 No 56 >d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis} Probab=91.28 E-value=0.072 Score=28.37 Aligned_columns=35 Identities=23% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 27887648886078854899999862013367874 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) ++.+|..+.|+|.+++|||||+.-|.|...+..|. T Consensus 24 ~i~~Ge~v~iiG~nGsGKSTLl~~l~g~~~~~~G~ 58 (242) T d1mv5a_ 24 EAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGE 58 (242) T ss_dssp EECTTEEEEEECCTTSSHHHHHHHHTTSSCCSBSC T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCE T ss_conf 66388489997179997899999998863067877 No 57 >d1q12a2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli} Probab=91.21 E-value=0.36 Score=23.82 Aligned_columns=97 Identities=18% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH Q ss_conf 27887648886078854899999862013367874310335302121347300100588567602113532247734330 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLP 129 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~ 129 (492) .++.|.-+-++|.+++|||||++.|.|...+..|. .|++-.+...-...|-++=.+-.++. |...+--.+|+. T Consensus 22 ~i~~Gei~~iiG~nGaGKSTllk~i~G~~~p~~G~----I~~~g~~~~~~~~~~~~ig~v~Q~~~---l~~~ltv~~ni~ 94 (232) T d1q12a2 22 DIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGD----LFIGEKRMNDTPPAERGVGMVFQSYA---LYPHLSVAENMS 94 (232) T ss_dssp CCCTTCEEEEECSTTSSHHHHHHHHHSSSCCSEEE----ECSTTSCCTTSCGGGSSEEEECTTCC---CCTTSCTTTTTT T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCE----EEECCCCCCCCHHHHHCCEEEEECCC---CCCCCHHHHHHH T ss_conf 56487089997378987899999997204656886----88888232452257404344221134---463301899999 Q ss_pred HEEEEEHHHHCCHHHHHHHHHHHH Q ss_conf 210200021203247999999999 Q Ver_Hs_NP_0061 130 ETLVIFVADMSRPWTVMESLQKWA 153 (492) Q Consensus 130 ~TlVvI~lD~s~PW~~m~qL~~Wi 153 (492) ..+-+-..+...=...+..+-..+ T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~ 118 (232) T d1q12a2 95 FGLKLAGAKKEVINQRVNQVAEVL 118 (232) T ss_dssp GGGSTTCCCTTTTTTHHHHHHHHT T ss_pred HHHHHCCCCHHHHHHHHHHHHHHC T ss_conf 756631578889999987788750 No 58 >d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=91.19 E-value=1.5 Score=19.82 Aligned_columns=140 Identities=22% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHC---CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC Q ss_conf 78876488860788548999998620---133678743103353021213473001005885676021135322477343 Q Ver_Hs_NP_0061 51 LPSGKNILVFGEDGSGKTTLMTKLQG---AEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAES 127 (492) Q Consensus 51 lp~~KnILvLG~~~sGKttLi~~Lq~---~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~s 127 (492) +|.|.-++|.|..++|||+|.-.+-- ......+.+..-+|++.-..-.....+--.+.+..+.. +. T Consensus 31 i~~G~lt~I~G~~GsGKT~l~l~l~~~~~~~~~~~~~~~~vlyi~~E~~~~~~rl~~~~~~~~~~~~-----------~~ 99 (251) T d1szpa2 31 VETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPD-----------DA 99 (251) T ss_dssp EESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGGGHHHHHHTCCCHH-----------HH T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHH-----------HH T ss_conf 6467489996588877889999999999842101567857999824573027999999987077635-----------66 Q ss_pred HHHEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCC Q ss_conf 30210200021203247999999999999999972488889999999999999862035000577776766454566540 Q Ver_Hs_NP_0061 128 LPETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDE 207 (492) Q Consensus 128 i~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de 207 (492) +.+..++-+-+....-.+++.+.+.+ T Consensus 100 l~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------------------ 125 (251) T d1szpa2 100 LNNVAYARAYNADHQLRLLDAAAQMM------------------------------------------------------ 125 (251) T ss_dssp GGGEEEEECCSTTTHHHHHHHTHHHH------------------------------------------------------ T ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHH------------------------------------------------------ T ss_conf 52101123165356999999999999------------------------------------------------------ Q ss_pred HHCCCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHH--------HHHHHHHHHHHHHHCCCEEEEEC Q ss_conf 0003688876221479940799850752255554205774778--------99999999999987087378845 Q Ver_Hs_NP_0061 208 ENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEH--------LDFIQSHLRRFCLQYGAALIYTS 273 (492) Q Consensus 208 ~~v~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~--------fD~Iqq~LR~~cL~YGAsLiYTS 273 (492) ..-++.++|| |.+..+-.. ++..+. +.-+.+.||+++-+||.+.+.|+ T Consensus 126 -------------~~~~~~liVI----Dsi~~l~~~-~~~~~~~~~~r~~~l~~~~~~L~~la~~~~v~vvvtn 181 (251) T d1szpa2 126 -------------SESRFSLIVV----DSVMALYRT-DFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTN 181 (251) T ss_dssp -------------HHSCEEEEEE----ETGGGGGSC-C-----CTHHHHHHHHHHHHHHHHHHHHHCCCEEEEE T ss_pred -------------HHCCCCEEEE----ECHHHHHHH-CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC T ss_conf -------------7279728998----411233110-0367776578999999999999999986498799982 No 59 >d1pf4a1 c.37.1.12 (A:321-564) Multidrug resistance ABC transporter MsbA, C-terminal domain {Vibrio cholerae} Probab=90.69 E-value=0.067 Score=28.57 Aligned_columns=70 Identities=19% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCC Q ss_conf 27887648886078854899999862013367874310335302121347300100588567602113532 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLK 120 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk 120 (492) .+++|+.+.|+|.+++|||||+.-|.|...+.+|. .-+-..++.+....+..+--.|+-+-...+...+. T Consensus 45 ~i~~Ge~~~i~G~sGsGKSTLl~~l~G~~~p~~G~-i~~~g~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~ 114 (244) T d1pf4a1 45 SIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGS-ICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIA 114 (244) T ss_dssp ECCTTCCCCCCCSCSSHHHHHHHHTSSSSCCSSSC-EECCCCCCCCSSTTSCCCBCCCEEESCCCCSSCHH T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC-EECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH T ss_conf 66488489998489987899999987415845340-12364002000011123442110100012223112 No 60 >d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii} Probab=90.01 E-value=0.087 Score=27.82 Aligned_columns=35 Identities=31% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 27887648886078854899999862013367874 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) .++.|+-+-++|.+++|||||++.|-|...+..|+ T Consensus 28 ~v~~Gei~gliG~nGaGKSTLl~~l~Gl~~p~~G~ 62 (239) T d1v43a3 28 TIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGR 62 (239) T ss_dssp EECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE T ss_conf 56387089997168985899999870676666677 No 61 >d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens)} Probab=89.80 E-value=0.094 Score=27.63 Aligned_columns=35 Identities=31% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 27887648886078854899999862013367874 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) +.+.|+.+-|+|.+++|||||++-|.|...+..|. T Consensus 36 ~i~~Ge~~~iiG~nGsGKSTLl~~i~Gl~~p~~G~ 70 (251) T d1jj7a_ 36 TLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQ 70 (251) T ss_dssp EECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCE T ss_conf 65388489997489987899999986203899988 No 62 >d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima} Probab=89.58 E-value=0.099 Score=27.48 Aligned_columns=35 Identities=23% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 27887648886078854899999862013367874 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) .+..|.-+-++|.+++|||||+.-|.|.-.+..|. T Consensus 24 ~v~~Gei~~llG~nGsGKSTLl~~l~G~~~p~~G~ 58 (238) T d1vpla_ 24 EIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGI 58 (238) T ss_dssp EECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCE T ss_conf 56286189997279987899999986036887776 No 63 >d1s4qa_ c.37.1.1 (A:) Guanylate kinase {Mycobacterium tuberculosis} Probab=89.57 E-value=0.091 Score=27.71 Aligned_columns=31 Identities=19% Q ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 7648886078854899999862013367874 Q Ver_Hs_NP_0061 54 GKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 54 ~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) |+-|.++|.+++|||||+..|.|..++..|. T Consensus 2 G~ii~iiGpsGaGKsTL~~~l~g~~~~~~G~ 32 (183) T d1s4qa_ 2 GRVVVLSGPSAVGKSTVVRCLRERIPNLHFS 32 (183) T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHSTTCEEC T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCCEE T ss_conf 4689997689987889999998526887137 No 64 >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori} Probab=89.25 E-value=0.1 Score=27.42 Aligned_columns=21 Identities=52% Q ss_pred CCEEEEEECCCCCHHHHHHHH Q ss_conf 764888607885489999986 Q Ver_Hs_NP_0061 54 GKNILVFGEDGSGKTTLMTKL 74 (492) Q Consensus 54 ~KnILvLG~~~sGKttLi~~L 74 (492) ++||+|-|..+||||||+..| T Consensus 166 ~~nIlIsG~tgSGKTT~l~al 186 (323) T d1g6oa_ 166 GKNVIVCGGTGSGKTTYIKSI 186 (323) T ss_dssp TCCEEEEESTTSSHHHHHHHH T ss_pred CCCEEEECCCCCHHHHHHHHH T ss_conf 897999838997479999999 No 65 >d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus} Probab=89.09 E-value=0.087 Score=27.85 Aligned_columns=35 Identities=29% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 27887648886078854899999862013367874 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) .+++|.-+-++|.+++|||||++.|.|.-.+..|. T Consensus 23 ~i~~Gei~~i~G~nGaGKSTLl~~i~G~~~p~~G~ 57 (200) T d1sgwa_ 23 TIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGE 57 (200) T ss_dssp EEETTCCEEEECCTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE T ss_conf 76488189997279997799999973278867556 No 66 >d1mt0a_ c.37.1.12 (A:) Haemolysin B ATP-binding protein {Escherichia coli} Probab=88.92 E-value=0.076 Score=28.20 Aligned_columns=35 Identities=31% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 27887648886078854899999862013367874 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) .++.|+-+-|+|.+++|||||+.-|.|...+..|. T Consensus 25 ~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~ 59 (241) T d1mt0a_ 25 SIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQ 59 (241) T ss_dssp EECTTCEEEEECSTTSSGGGHHHHHTTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCE T ss_conf 65488589997389986899999997311477776 No 67 >d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=88.77 E-value=1.2 Score=20.35 Aligned_columns=125 Identities=17% Q ss_pred EEEEEECCCCCHHHHHHH-HHCCCCCCCCCCCEEEEEECCCCCCC----------------------------CCCCCCE Q ss_conf 488860788548999998-62013367874310335302121347----------------------------3001005 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTK-LQGAEHGKKGRGLEYLYLSVHDEDRD----------------------------DHTRCNV 106 (492) Q Consensus 56 nILvLG~~~sGKttLi~~-Lq~~e~~kkg~gLeY~Yl~V~D~drD----------------------------d~~R~~V 106 (492) ||-|+|..+.|||||+++ |...-.-..+..-+..|.|.+.+.++ +....-+ T Consensus 19 NI~IiGHvdhGKTTL~d~Ll~~~g~i~~~~~g~~r~~D~~~dE~eRgITikss~isl~~~~~~~~~~~~~~~~~~~~~lI 98 (341) T d1n0ua2 19 NMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLI 98 (341) T ss_dssp EEEEECCGGGTHHHHHHHHHHHHBCCBC------------------CCCBCCCEEEEEEECCHHHHHHCSSCCCSSEEEE T ss_pred EEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEE T ss_conf 58999425988789999999982653123343100025634577628606545899974476432100000124676069 Q ss_pred EEECCCCCCCCCCCCCCCCCCHHHEEEEEHHHHCCHHHHHHHHHHHHHHHH-----------HHHHHCCCCHHHHHHHHH Q ss_conf 885676021135322477343302102000212032479999999999999-----------999724888899999999 Q Ver_Hs_NP_0061 107 WILDGDLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLR-----------EHIDKMKIPPEKMRELER 175 (492) Q Consensus 107 wiLdg~~~~~~LLk~al~~~si~~TlVvI~lD~s~PW~~m~qL~~Wi~vLr-----------~hi~~L~i~~e~~~e~~~ 175 (492) -++|-+ +|.....-...+=.+.+..++++---.-+=.--+.+-+++...+ ..+..|+.+++++-+--+ T Consensus 99 nlIDTP-GH~dF~~ev~~alr~~DgaiLVVDa~eGv~~qT~~vl~~a~~~~ip~iivINKiDrli~El~l~p~e~y~~l~ 177 (341) T d1n0ua2 99 NLIDSP-GHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFA 177 (341) T ss_dssp EEECCC-CCCSSCHHHHHHHHTCSEEEEEEETTTBSCHHHHHHHHHHHHTTCEEEEEEECHHHHHHTSCCCHHHHHHHHH T ss_pred EEEECC-CHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCHHHHHHHHH T ss_conf 997478-6567899999998860616898977889860369999999974797899986410354414799899999999 Q ss_pred HHHHHH Q ss_conf 999998 Q Ver_Hs_NP_0061 176 KFVKDF 181 (492) Q Consensus 176 ~~~~~~ 181 (492) +++.+. T Consensus 178 ~iie~v 183 (341) T d1n0ua2 178 RTVESV 183 (341) T ss_dssp HHHHHH T ss_pred HHHHHH T ss_conf 999999 No 68 >d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus)} Probab=88.64 E-value=0.14 Score=26.55 Aligned_columns=34 Identities=29% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC Q ss_conf 2788764888607885489999986201336787 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKG 83 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg 83 (492) .++.|.-+-|+|.+++|||||+.-|.|...+..| T Consensus 58 ~i~~Ge~v~IiG~nGsGKSTLl~~l~Gl~~~~~g 91 (281) T d1r0wa_ 58 NIEKGEMLAITGSTGSGKTSLLMLILGELEASEG 91 (281) T ss_dssp EECTTCEEEEEESTTSSHHHHHHHHHTSSCCSEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC T ss_conf 6538858999738999789999998401474422 No 69 >d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium} Probab=87.65 E-value=0.16 Score=26.13 Aligned_columns=35 Identities=29% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 27887648886078854899999862013367874 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) .++.|.-+-|+|.+++|||||+..|.|...+.+|. T Consensus 24 ~v~~Gei~giiG~nGsGKSTLlk~i~G~~~p~~G~ 58 (258) T d1b0ua_ 24 QARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGA 58 (258) T ss_dssp EECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCC T ss_conf 56387079997378987899999997404756785 No 70 >d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii} Probab=87.54 E-value=0.16 Score=26.03 Aligned_columns=35 Identities=23% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 27887648886078854899999862013367874 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) .++.|.-+-++|.+++|||||+..|-|...+..|. T Consensus 27 ~i~~Ge~~~iiG~sGsGKSTL~~~l~gl~~p~~G~ 61 (230) T d1l2ta_ 27 NIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGE 61 (230) T ss_dssp EECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCE T ss_conf 66487289997269987899999986205766875 No 71 >d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139} Probab=87.44 E-value=0.32 Score=24.16 Aligned_columns=121 Identities=16% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH Q ss_conf 27887648886078854899999862013367874310335302121347300100588567602113532247734330 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLP 129 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~ 129 (492) .++.|.-+-++|.+++|||||+..|-|...+.+|+-+ +-=.++.+......+|.++-.+..++ .+.+.-++. T Consensus 28 ~i~~Gei~~liG~nGaGKSTll~~i~G~~~p~~G~I~-~~g~~i~~~~~~~~~r~~i~~~~q~~-------~l~~~ltv~ 99 (240) T d1ji0a_ 28 KVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKII-FNGQDITNKPAHVINRMGIALVPEGR-------RIFPELTVY 99 (240) T ss_dssp EEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEE-ETTEECTTCCHHHHHHTTEEEECSSC-------CCCTTSBHH T ss_pred EECCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEE-ECCCCHHHHHHHHHHHHHHCCCCCCC-------CCCCCHHHH T ss_conf 5538618999737999789999999721576677478-76846212349999875410245321-------001001299 Q ss_pred HEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH Q ss_conf 2102000212032479999999999999999724888899999999999 Q Ver_Hs_NP_0061 130 ETLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFV 178 (492) Q Consensus 130 ~TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~ 178 (492) +.+....-....++...++...=+......-+.++-.+..+---+++.+ T Consensus 100 eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LSgGqkQrv 148 (240) T d1ji0a_ 100 ENLMMGAYNRKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQML 148 (240) T ss_dssp HHHHGGGTTCCCSSHHHHHHHHHHHHCHHHHTTTTSBSSSSCHHHHHHH T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH T ss_conf 9999987404565789999999999862102345423676866789999 No 72 >d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis} Probab=87.35 E-value=0.14 Score=26.39 Aligned_columns=34 Identities=29% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 7887648886078854899999862013367874 Q Ver_Hs_NP_0061 51 LPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 51 lp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) ++.|.-+-++|.+++|||||+..|.|.-.+.+|. T Consensus 26 i~~Gei~~iiG~nGaGKSTLl~~l~Gl~~p~~G~ 59 (240) T d1g2912 26 VKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQ 59 (240) T ss_dssp EETTCEEEEECSTTSSHHHHHHHHHTSSCCSEEE T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCC T ss_conf 6387089997478986899999996015755771 No 73 >d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus} Probab=87.21 E-value=0.18 Score=25.73 Aligned_columns=51 Identities=27% Q ss_pred CCCCCCCCCHHH--HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHH Q ss_conf 445674344068--999999998178622788764888607885489999986 Q Ver_Hs_NP_0061 24 DLTSEEEEGQSL--WSSILSEVSTRARSKLPSGKNILVFGEDGSGKTTLMTKL 74 (492) Q Consensus 24 ~~~~~~~~~~~l--Wssil~eV~~~~~~klp~~KnILvLG~~~sGKttLi~~L 74 (492) |+.-.|+-.+.| |-..+..=....+..+|..++||+.|-+++|||+|+..| T Consensus 10 di~G~d~~k~~i~~~i~~~~~~~~~~~~~~~~~~~iLl~GppGtGKT~la~~l 62 (247) T d1ixza_ 10 DVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAV 62 (247) T ss_dssp GCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHH T ss_pred HHCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHH T ss_conf 75171899999999999862828898658998872687668765267999999 No 74 >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major} Probab=86.44 E-value=0.23 Score=25.12 Aligned_columns=25 Identities=40% Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHC Q ss_conf 8876488860788548999998620 Q Ver_Hs_NP_0061 52 PSGKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 52 p~~KnILvLG~~~sGKttLi~~Lq~ 76 (492) |-|+||++.|-.++||||+-..|.. T Consensus 3 ~kg~~I~i~G~~GsGKTTia~~La~ 27 (174) T d1y63a_ 3 PKGINILITGTPGTGKTSMAEMIAA 27 (174) T ss_dssp CSSCEEEEECSTTSSHHHHHHHHHH T ss_pred CCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 8875588877999986789999999 No 75 >d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii} Probab=86.08 E-value=0.19 Score=25.67 Aligned_columns=35 Identities=34% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCC Q ss_conf 27887648886078854899999862013367874 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGR 84 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~ 84 (492) +++.|.-+-++|.+++|||||+..|.|.-.+..|+ T Consensus 26 ~i~~Gei~~liG~nGaGKSTL~~~i~G~~~p~~G~ 60 (254) T d1g6ha_ 26 SVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGR 60 (254) T ss_dssp EEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEE T ss_pred EECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCE T ss_conf 56387189997378987899999970787777677 No 76 >d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3} Probab=85.51 E-value=0.76 Score=21.65 Aligned_columns=102 Identities=26% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC------------------------------- Q ss_conf 7887648886078854899999862013367874310335302121347------------------------------- Q Ver_Hs_NP_0061 51 LPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRD------------------------------- 99 (492) Q Consensus 51 lp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drD------------------------------- 99 (492) ++-+-.|+++|-.+|||||+-+.|... |+|.|++..|.-|. T Consensus 3 ~~k~mrivl~G~pGSGKsTiak~La~~--------lg~~~is~g~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 74 (189) T d2ak3a1 3 SARLLRAAIMGAPGSGKGTVSSRITKH--------FELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIPDDVMTRLV 74 (189) T ss_dssp SSCCCEEEEECCTTSSHHHHHHHHHHH--------BCCEEEEHHHHHHHHHHTTCHHHHHHHHHHHTTCCCCHHHHHHHH T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHH--------CCCEEECHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH T ss_conf 663404788858999777799999997--------198265176899998630660357887764304621679999889 Q ss_pred ----CCCCCCEEEECCCCCCCCCCCCCCCCCCHHHEEEEEHHHHC--------CHHHHHHHHHHHHHHHHHHHH Q ss_conf ----30010058856760211353224773433021020002120--------324799999999999999997 Q Ver_Hs_NP_0061 100 ----DHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMS--------RPWTVMESLQKWASVLREHID 161 (492) Q Consensus 100 ----d~~R~~VwiLdg~~~~~~LLk~al~~~si~~TlVvI~lD~s--------~PW~~m~qL~~Wi~vLr~hi~ 161 (492) .......|++||-+....-...+.... .+...|.+.++.. +|-++..+|+.+-.-...+++ T Consensus 75 ~~~~~~~~~~~~ildg~p~~~~q~~~l~~~~-~~~~vi~L~~~~~~~~~Rl~~r~e~i~~Rl~~y~~~~~pl~~ 147 (189) T d2ak3a1 75 LHELKNLTQYNWLLDGFPRTLPQAEALDRAY-QIDTVINLNVPFEVIKQRLTDRPETVVKRLKAYEAQTEPVLE 147 (189) T ss_dssp HHHHHHHTTSCEEEESCCCSHHHHHHHHTTC-CCCEEEEEECCHHHHHHHHTGSHHHHHHHHHHHHHHHHHHHH T ss_pred HHHHHHCCCCCCEECCCCCHHHHHHHHHHHC-CCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH T ss_conf 9998730446540003332278999998742-877178885073434444305888999999999998689999 No 77 >d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima} Probab=84.58 E-value=1.4 Score=20.02 Aligned_columns=53 Identities=19% Q ss_pred CCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHH Q ss_conf 9407998507522555542057747789999999999998708737884566635679999999 Q Ver_Hs_NP_0061 224 GIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYI 287 (492) Q Consensus 224 GiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~ke~kNl~lLykYi 287 (492) |+|.++|.+|+|..+ ++....+++++... +.+-..|++|++...+++.|.+++ T Consensus 41 ~i~~IIVlNK~DL~~---------~~~~~~~~~~~~~~--~~~~~vi~iSa~~~~gi~~L~~~l 93 (225) T d1u0la2 41 ELETVMVINKMDLYD---------EDDLRKVRELEEIY--SGLYPIVKTSAKTGMGIEELKEYL 93 (225) T ss_dssp TCEEEEEECCGGGCC---------HHHHHHHHHHHHHH--TTTSCEEECCTTTCTTHHHHHHHH T ss_pred CCCEEEEEECCCCCC---------HHHHHHHHHHHHHH--HCCCCEEEEECCCCCCHHHHHHHH T ss_conf 897899961765588---------52799999999987--438727998547876734677663 No 78 >d3adk__ c.37.1.1 (-) Adenylate kinase {Pig (Sus scrofa)} Probab=83.90 E-value=0.22 Score=25.19 Aligned_columns=27 Identities=44% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHC Q ss_conf 278876488860788548999998620 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~ 76 (492) |+..+|-|+|.|-+++||||+-+.|.. T Consensus 4 ~~~~~~iI~i~G~~GsGKsT~a~~La~ 30 (194) T d3adk__ 4 KLKKSKIIFVVGGPGSGKGTQCEKIVQ 30 (194) T ss_dssp HHHTSCEEEEEECTTSSHHHHHHHHHH T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 002587789885899986889999999 No 79 >d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae} Probab=83.89 E-value=0.24 Score=24.91 Aligned_columns=23 Identities=35% Q ss_pred CCEEEEEECCCCCHHHHHHHHHC Q ss_conf 76488860788548999998620 Q Ver_Hs_NP_0061 54 GKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 54 ~KnILvLG~~~sGKttLi~~Lq~ 76 (492) +|-|.|.|..++|||||+..|.. T Consensus 7 ~~~I~i~G~~g~GKSTL~n~L~~ 29 (192) T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAA 29 (192) T ss_dssp CEEEEEECCTTSHHHHHHHHHHH T ss_pred CCEEEEECCCCCCHHHHHHHHHH T ss_conf 40788873899878899999998 No 80 >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum} Probab=83.76 E-value=1.2 Score=20.44 Aligned_columns=64 Identities=20% Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEE Q ss_conf 65445674344068999999998178622788764888607885489999986201336787431033 Q Ver_Hs_NP_0061 22 AGDLTSEEEEGQSLWSSILSEVSTRARSKLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYL 89 (492) Q Consensus 22 ~~~~~~~~~~~~~lWssil~eV~~~~~~klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~ 89 (492) |.++..-|++-+.|=+.+..-+...+. .|. ++|+-|..++|||+++..|.+.-....+...-|. T Consensus 15 p~~l~~re~~~~~l~~~l~~~~~~~~~--~~~--~ili~GppGtGKT~~~r~la~~l~~~~~~~~~~~ 78 (276) T d1fnna2 15 PKRLPHREQQLQQLDILLGNWLRNPGH--HYP--RATLLGRPGTGKTVTLRKLWELYKDKTTARFVYI 78 (276) T ss_dssp CSCCTTCHHHHHHHHHHHHHHHHSTTS--SCC--EEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEE T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCC--CCC--EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEC T ss_conf 663402589999999999999743576--667--3788789998389999999998552058833303 No 81 >d1cr1a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7} Probab=83.39 E-value=2.6 Score=18.15 Aligned_columns=163 Identities=18% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHH Q ss_conf 78876488860788548999998620133678743103353021213473001005885676021135322477343302 Q Ver_Hs_NP_0061 51 LPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 (492) Q Consensus 51 lp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~~R~~VwiLdg~~~~~~LLk~al~~~si~~ 130 (492) ++.|.-++|.|.+++|||+|...|-..--.+.| . T Consensus 32 ~~~G~l~~i~G~pG~GKT~l~l~la~~~a~~~g----------------------------------------------~ 65 (277) T d1cr1a_ 32 ARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMG----------------------------------------------K 65 (277) T ss_dssp BCTTCEEEEEESTTSSHHHHHHHHHHHHHHTSC----------------------------------------------C T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCC----------------------------------------------C T ss_conf 647827999659870079999999999998379----------------------------------------------9 Q ss_pred EEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCHHC Q ss_conf 10200021203247999999999999999972488889999999999999862035000577776766454566540000 Q Ver_Hs_NP_0061 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLTSGSDEENV 210 (492) Q Consensus 131 TlVvI~lD~s~PW~~m~qL~~Wi~vLr~hi~~L~i~~e~~~e~~~~~~~~~qey~ep~~~~~gs~~r~~~~~s~~de~~v 210 (492) ...++.+.|+.. .+..=+......+....-...+.....+..+.++.+..........-..+.....++ T Consensus 66 ~v~~~s~E~~~~--------~~~~rl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 134 (277) T d1cr1a_ 66 KVGLAMLEESVE--------ETAEDLIGLHNRVRLRQSDSLKREIIENGKFDQWFDELFGNDTFHLYDSFAEAETDR--- 134 (277) T ss_dssp CEEEEESSSCHH--------HHHHHHHHHHTTSCGGGCHHHHHHHHHHTHHHHHHHHHHSSSCEEEECCCCSCCHHH--- T ss_pred CEEEEEECCCHH--------HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH--- T ss_conf 429998325658--------999999987624652322211000123889999999975015542423645678899--- Q ss_pred CCCCCCCCEECCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEC Q ss_conf 368887622147994079985075225555420577477899999999999987087378845 Q Ver_Hs_NP_0061 211 ALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTS 273 (492) Q Consensus 211 ~lPLgeg~Lt~NLGiPi~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS 273 (492) +...-..+....++.++||=.=........+. -+.++.+.+...||.+|-.||.+.|.++ T Consensus 135 -i~~~~~~~~~~~~~~lvvID~l~~l~~~~~~~--~~~~~i~~~~~~L~~lA~~~~v~vi~v~ 194 (277) T d1cr1a_ 135 -LLAKLAYMRSGLGCDVIILDHISIVVSASGES--DERKMIDNLMTKLKGFAKSTGVVLVVIC 194 (277) T ss_dssp -HHHHHHHHHHTSCCSEEEEEEEEC------------CHHHHHHHHHHHHHHHHHCCEEEEEE T ss_pred -HHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCC--CHHHHHHHHHHHHHHHHHHCCCEEEEEC T ss_conf -99999999983498689986011222256655--2689999999999999986598799951 No 82 >d1dar_2 c.37.1.8 (1-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus} Probab=83.00 E-value=0.38 Score=23.63 Aligned_columns=80 Identities=16% Q ss_pred EEEEEECCCCCHHHHHHHH---HCCCCCCCCCCCEEEEEECCCCCCC------------CCCCCCEEEECCCCCCCCCCC Q ss_conf 4888607885489999986---2013367874310335302121347------------300100588567602113532 Q Ver_Hs_NP_0061 56 NILVFGEDGSGKTTLMTKL---QGAEHGKKGRGLEYLYLSVHDEDRD------------DHTRCNVWILDGDLYHKGLLK 120 (492) Q Consensus 56 nILvLG~~~sGKttLi~~L---q~~e~~kkg~gLeY~Yl~V~D~drD------------d~~R~~VwiLdg~~~~~~LLk 120 (492) ||-|+|..++|||||+.+| .|......+---+.++.|..++.+. ..-...+-++|-+ +|..++. T Consensus 14 ni~iiGh~~~GKTTL~e~ll~~~g~i~~~g~v~~~~~~~D~~~~E~~r~~si~~~~~~~~~~~~~i~~iDtP-Gh~df~~ 92 (282) T d1dar_2 14 NIGIAAHIDAGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINIIDTP-GHVDFTI 92 (282) T ss_dssp EEEEEECTTSCHHHHHHHHHHHHCC----------------------------CCEEEEEETTEEEEEECCC-SSTTCHH T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHCCCCEEEEEEEEECCCCEEEEEECC-CCHHHHH T ss_conf 689994238987899999998611234433344201103111565414772210024540157578998468-7346799 Q ss_pred CCCCCCCHHHEEEEEH Q ss_conf 2477343302102000 Q Ver_Hs_NP_0061 121 FAVSAESLPETLVIFV 136 (492) Q Consensus 121 ~al~~~si~~TlVvI~ 136 (492) ....+-.+-+..|+++ T Consensus 93 e~~~al~~~D~ailVi 108 (282) T d1dar_2 93 EVERSMRVLDGAIVVF 108 (282) T ss_dssp HHHHHHHHCSEEEEEE T ss_pred HHHHHHHHHCEEEEEE T ss_conf 9999988626167777 No 83 >d1ak2_1 c.37.1.1 (14-146,177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2} Probab=82.30 E-value=0.43 Score=23.30 Aligned_columns=25 Identities=36% Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHC Q ss_conf 8876488860788548999998620 Q Ver_Hs_NP_0061 52 PSGKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 52 p~~KnILvLG~~~sGKttLi~~Lq~ 76 (492) |-|.-|++.|-+++||||+...|.. T Consensus 1 ~kg~~Ivl~G~~GsGKsT~~~~La~ 25 (190) T d1ak2_1 1 PKGVRAVLLGPPGAGKGTQAPKLAK 25 (190) T ss_dssp CCCCEEEEECCTTSSHHHHHHHHHH T ss_pred CCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 9961788875899987889999999 No 84 >d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae)} Probab=81.07 E-value=0.54 Score=22.65 Aligned_columns=26 Identities=23% Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHC Q ss_conf 78876488860788548999998620 Q Ver_Hs_NP_0061 51 LPSGKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 51 lp~~KnILvLG~~~sGKttLi~~Lq~ 76 (492) .|+++=.+|.|.+++||||||..|.+ T Consensus 22 ~~~~~~~~iiG~NGsGKStLL~al~~ 47 (427) T d1w1wa_ 22 FGESNFTSIIGPNGSGKSNMMDAISF 47 (427) T ss_dssp CTTCSEEEEECSTTSSHHHHHHHHHH T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 68887599985889978999999998 No 85 >d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis} Probab=79.46 E-value=0.49 Score=22.94 Aligned_columns=57 Identities=18% Q ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCC-CCCCEEEEC Q ss_conf 764888607885489999986201336787431033530212134730-010058856 Q Ver_Hs_NP_0061 54 GKNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDH-TRCNVWILD 110 (492) Q Consensus 54 ~KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~V~D~drDd~-~R~~VwiLd 110 (492) ++.++|+|-.++||||||.+|.+....+-+.-=+..=...|....-.. .--+.|++| T Consensus 97 ~~~~~~vG~snVGKSSLIN~L~~~~~~~t~~vs~~~~~g~hTT~~~~l~~~~g~~liD 154 (231) T d1t9ha2 97 DKTTVFAGQSGVGKSSLLNAISPELGLRTNEISEHLGRGKHTTRHVELIHTSGGLVAD 154 (231) T ss_dssp TSEEEEEESHHHHHHHHHHHHCC-------------------CCCCCEEEETTEEEES T ss_pred CCEEEEECCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCCEEEEEEEEEEECCCEEEEE T ss_conf 1436887589984889998630445541014567899836888889997268758985 No 86 >d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli} Probab=79.38 E-value=0.58 Score=22.43 Aligned_columns=23 Identities=35% Q ss_pred CCEEEEEECCCCCHHHHHHHHHC Q ss_conf 76488860788548999998620 Q Ver_Hs_NP_0061 54 GKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 54 ~KnILvLG~~~sGKttLi~~Lq~ 76 (492) ||=|.|.|..+|||||+...|.. T Consensus 2 ~k~I~i~G~~GsGKsT~~~~L~~ 24 (210) T d4tmka_ 2 SKYIVIEGLEGAGKTTARNVVVE 24 (210) T ss_dssp CCEEEEEECTTSCHHHHHHHHHH T ss_pred CEEEEEECCCCCCHHHHHHHHHH T ss_conf 60789876899987899999999 No 87 >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes} Probab=79.07 E-value=1 Score=20.81 Aligned_columns=47 Identities=21% Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHC Q ss_conf 434406899999999817862278876488860788548999998620 Q Ver_Hs_NP_0061 29 EEEGQSLWSSILSEVSTRARSKLPSGKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 29 ~~~~~~lWssil~eV~~~~~~klp~~KnILvLG~~~sGKttLi~~Lq~ 76 (492) ++|=++.-..++++...++..--.+ |.||+.|-+++|||+|...+.+ T Consensus 8 ~~e~~~~l~~~~~~~~~~~~~~~~P-kgilL~GpPGtGKT~lAkaia~ 54 (273) T d1gvnb_ 8 DKQFENRLNDNLEELIQGKKAVESP-TAFLLGGQPGSGKTSLRSAIFE 54 (273) T ss_dssp HHHHHHHHHHHHHHHHTTCCCCSSC-EEEEEECCTTSCTHHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCC-EEEEEECCCCCCHHHHHHHHHH T ss_conf 7999999999999886077753177-7889736999748999999999 No 88 >d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli} Probab=78.94 E-value=0.4 Score=23.49 Aligned_columns=27 Identities=30% Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHC Q ss_conf 278876488860788548999998620 Q Ver_Hs_NP_0061 50 KLPSGKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 50 klp~~KnILvLG~~~sGKttLi~~Lq~ 76 (492) .++.|+-+-++|.+++|||||++.|-| T Consensus 21 ~i~~Gei~~iiG~nGaGKSTLl~~l~G 47 (231) T d1l7vc_ 21 EVRAGEILHLVGPNGAGKSTLLARMAG 47 (231) T ss_dssp EEETTCEEECBCCTTSSHHHHHHHHHT T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHC T ss_conf 462871899985899868999999846 No 89 >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni} Probab=78.86 E-value=0.51 Score=22.79 Aligned_columns=22 Identities=50% Q ss_pred CEEEEEECCCCCHHHHHHHHHC Q ss_conf 6488860788548999998620 Q Ver_Hs_NP_0061 55 KNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 55 KnILvLG~~~sGKttLi~~Lq~ 76 (492) |||++.|-.++||||+-..|+. T Consensus 1 k~I~l~G~~GsGKtTia~~La~ 22 (161) T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAK 22 (161) T ss_dssp CCEEEECCTTSCHHHHHHHHHH T ss_pred CEEEEECCCCCCHHHHHHHHHH T ss_conf 9488874899977789999999 No 90 >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus)} Probab=78.52 E-value=1.1 Score=20.72 Aligned_columns=51 Identities=24% Q ss_pred CCCCCCCCCHHHHHHHHHHHHHC---CCCCCCCCCEEEEEECCCCCHHHHHHHH Q ss_conf 44567434406899999999817---8622788764888607885489999986 Q Ver_Hs_NP_0061 24 DLTSEEEEGQSLWSSILSEVSTR---ARSKLPSGKNILVFGEDGSGKTTLMTKL 74 (492) Q Consensus 24 ~~~~~~~~~~~lWssil~eV~~~---~~~klp~~KnILvLG~~~sGKttLi~~L 74 (492) |+.-.++-.+.|=..+..-+... .+..++..+.||+.|.+++|||+|+..| T Consensus 8 di~G~~~~k~~l~e~i~~~~~~~~~~~~~g~~~~~giLL~GppGtGKT~la~ai 61 (265) T d1r7ra3 8 DIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAI 61 (265) T ss_dssp SCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHH T ss_pred HHHCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHH T ss_conf 760649999999999998851827897477998761788788897689999999 No 91 >d1gky__ c.37.1.1 (-) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae)} Probab=78.48 E-value=0.77 Score=21.62 Aligned_columns=64 Identities=27% Q ss_pred CEEEEEECCCCCHHHHHHHHHC-------------CCCCCCCC--CCEEEEEECC--CCCCCCCCCCCEEEECCCCCCCC Q ss_conf 6488860788548999998620-------------13367874--3103353021--21347300100588567602113 Q Ver_Hs_NP_0061 55 KNILVFGEDGSGKTTLMTKLQG-------------AEHGKKGR--GLEYLYLSVH--DEDRDDHTRCNVWILDGDLYHKG 117 (492) Q Consensus 55 KnILvLG~~~sGKttLi~~Lq~-------------~e~~kkg~--gLeY~Yl~V~--D~drDd~~R~~VwiLdg~~~~~~ 117 (492) +-|+|.|-.++||+||..+|.. .-.++.|. |.+|.|.+.. +.......-+.-|.-++..|-.+ T Consensus 2 R~Ivi~GPsG~GK~tl~~~l~~~~~~~~~~~~~~ttR~~r~~E~~g~~y~fvs~~~f~~~i~~~~~~e~~~~~~~~yG~~ 81 (186) T d1gky__ 2 RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGST 81 (186) T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTTEEECCEEECSCCCTTCCBTTTEEECCHHHHHHHHHTTCEEEEEEETTEEEEEE T ss_pred CEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHCCCCCCCH T ss_conf 35899727887788999999986799705778775237753312672100148799999986044201000033100102 Q ss_pred C Q ss_conf 5 Q Ver_Hs_NP_0061 118 L 118 (492) Q Consensus 118 L 118 (492) + T Consensus 82 ~ 82 (186) T d1gky__ 82 V 82 (186) T ss_dssp H T ss_pred H T ss_conf 4 No 92 >d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis} Probab=78.44 E-value=2.2 Score=18.66 Aligned_columns=49 Identities=20% Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC Q ss_conf 068999999998178622788764888607885489999986201336787 Q Ver_Hs_NP_0061 33 QSLWSSILSEVSTRARSKLPSGKNILVFGEDGSGKTTLMTKLQGAEHGKKG 83 (492) Q Consensus 33 ~~lWssil~eV~~~~~~klp~~KnILvLG~~~sGKttLi~~Lq~~e~~kkg 83 (492) ..+...........+. .+.+-.|.|+|-+.+||||||.+|-+....+-| T Consensus 93 ~~~l~~~~~~~~~~~~--~~~~~~v~vvG~PNVGKSSliN~L~~~~~~~v~ 141 (273) T d1puja_ 93 KEILQEKFDRMRAKGV--KPRAIRALIIGIPNVGKSTLINRLAKKNIAKTG 141 (273) T ss_dssp HHHHHHHHHHHHHTTC--CCCCEEEEEEESTTSSHHHHHHHHHTSCCC--- T ss_pred HHHHHHHHHHHHHCCC--CCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEC T ss_conf 4322234444421144--344168999855877357888776426424555 No 93 >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli} Probab=78.37 E-value=1.1 Score=20.62 Aligned_columns=52 Identities=25% Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCC---CCCCCEEEEEECCCCCHHHHHHHHHC Q ss_conf 445674344068999999998178622---78876488860788548999998620 Q Ver_Hs_NP_0061 24 DLTSEEEEGQSLWSSILSEVSTRARSK---LPSGKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 24 ~~~~~~~~~~~lWssil~eV~~~~~~k---lp~~KnILvLG~~~sGKttLi~~Lq~ 76 (492) |+.-.++..+.| ..+++-...+.+-. +|--|.||+.|.+++|||+|+..|.. T Consensus 13 di~G~~~~k~~l-~~~i~~~~~~~~~~~~g~~~~~giLL~GppGtGKT~la~alA~ 67 (256) T d1lv7a_ 13 DVAGCDEAKEEV-AELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAG 67 (256) T ss_dssp GSCSCHHHHHHT-HHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHH T ss_pred HHCCHHHHHHHH-HHHHHHHHCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHH T ss_conf 860648999999-9999986282889866899887068767876436899999987 No 94 >d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)} Probab=78.29 E-value=0.66 Score=22.06 Aligned_columns=23 Identities=39% Q ss_pred CCEEEEEECCCCCHHHHHHHHHC Q ss_conf 76488860788548999998620 Q Ver_Hs_NP_0061 54 GKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 54 ~KnILvLG~~~sGKttLi~~Lq~ 76 (492) |+=|+|.|..++||||+.+.|.. T Consensus 3 g~lI~i~G~~GsGKsT~~~~L~~ 25 (209) T d1nn5a_ 3 GALIVLEGVDRAGKSTQSRKLVE 25 (209) T ss_dssp CCEEEEEESTTSSHHHHHHHHHH T ss_pred CEEEEEECCCCCCHHHHHHHHHH T ss_conf 60789876899987899999999 No 95 >d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus)} Probab=76.98 E-value=1.2 Score=20.41 Aligned_columns=35 Identities=29% Q ss_pred HHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHC Q ss_conf 99999817862278876488860788548999998620 Q Ver_Hs_NP_0061 39 ILSEVSTRARSKLPSGKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 39 il~eV~~~~~~klp~~KnILvLG~~~sGKttLi~~Lq~ 76 (492) ......+..+ .|. .+||+.|.+++|||+|...|.. T Consensus 28 ~~~~~~~~~~--~p~-~siLl~GppGtGKT~lakalA~ 62 (246) T d1d2na_ 28 LVQQTKNSDR--TPL-VSVLLEGPPHSGKTALAAKIAE 62 (246) T ss_dssp HHHHHHHCSS--CSE-EEEEEECSTTSSHHHHHHHHHH T ss_pred HHHHHHCCCC--CCC-CEEEEECCCCCHHHHHHHHHHH T ss_conf 9998731357--886-5588874897548999999999 No 96 >d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus} Probab=76.73 E-value=6.4 Score=15.61 Aligned_columns=90 Identities=19% Q ss_pred EEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC-------------CCCCHHHHHHHHHHHHHC Q ss_conf 7998507522555542057747789999999999998708737884566-------------635679999999888727 Q Ver_Hs_NP_0061 227 VLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVK-------------EEKNLDLLYKYIVHKTYG 293 (492) Q Consensus 227 i~VVctKsD~ie~LeKe~~y~dE~fD~Iqq~LR~~cL~YGAsLiYTS~k-------------e~kNl~lLykYi~Hrlyg 293 (492) |++|.+..+.+...++. +|..++|=...+.||+- |....+.|++ ......-. .+++-. T Consensus 5 iLii~t~~~~~~~~~~t-G~~~~E~~~P~~~l~~a----G~~V~~aS~~Gg~~~~d~~s~~~~~~~~~~~----~~~l~~ 75 (221) T d1u9ca_ 5 VLMVVTNHTTITDDHKT-GLWLEEFAVPYLVFQEK----GYDVKVASIQGGEVPLDPRSINEKDPSWAEA----EAALKH 75 (221) T ss_dssp EEEEECCCCEEETTEEC-CBCHHHHHHHHHHHHHT----TCEEEEEESSCBCCCBCGGGSSSCCGGGHHH----HHHTTS T ss_pred EEEEEECCCCCCCCCCC-CEEHHHHHHHHHHHHHC----CCEEEEEECCCCEEEEECCCCCCHHHHHHHC----CCEECC T ss_conf 89997364003788667-60076789999999964----9779998428980033015678102123221----611016 Q ss_pred CCCCCCCEEEECCEEEECCCC-------CCHHHHHHHHH Q ss_conf 776765503311214536888-------83788998760 Q Ver_Hs_NP_0061 294 FHFTTPALVVEKDAVFIPAGW-------DNEKKIAILHE 325 (492) Q Consensus 294 fpf~~ka~VvdkD~IfIPaGW-------Ds~~KI~Il~E 325 (492) -.--......++|.||||-|| +|...++++++ T Consensus 76 ~~~l~~v~~~~yDai~ipGG~g~~~~l~~~~~l~~li~~ 114 (221) T d1u9ca_ 76 TARLSKDDAHGFDAIFLPGGHGTMFDFPDNETLQYVLQQ 114 (221) T ss_dssp BEECCGGGGSSCSEEEECCCTTHHHHSTTCHHHHHHHHH T ss_pred CCCHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH T ss_conf 887666581304388981687754456566899999999 No 97 >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6} Probab=76.18 E-value=0.82 Score=21.44 Aligned_columns=30 Identities=40% Q ss_pred CEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCEEEEEE Q ss_conf 64888607885489999986201336787431033530 Q Ver_Hs_NP_0061 55 KNILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLS 92 (492) Q Consensus 55 KnILvLG~~~sGKttLi~~Lq~~e~~kkg~gLeY~Yl~ 92 (492) .||+|.|-.++||||+-..|.. -|+|.|++ T Consensus 5 ~~I~i~G~~GsGKsTia~~La~--------~l~~~~i~ 34 (173) T d1rkba_ 5 PNILLTGTPGVGKTTLGKELAS--------KSGLKYIN 34 (173) T ss_dssp CCEEEECSTTSSHHHHHHHHHH--------HHCCEEEE T ss_pred CEEEEECCCCCCHHHHHHHHHH--------HCCCCEEE T ss_conf 5145787899987889999999--------81981652 No 98 >d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus)} Probab=75.67 E-value=1.2 Score=20.48 Aligned_columns=51 Identities=20% Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCC---CCCCCEEEEEECCCCCHHHHHHHH Q ss_conf 445674344068999999998178622---788764888607885489999986 Q Ver_Hs_NP_0061 24 DLTSEEEEGQSLWSSILSEVSTRARSK---LPSGKNILVFGEDGSGKTTLMTKL 74 (492) Q Consensus 24 ~~~~~~~~~~~lWssil~eV~~~~~~k---lp~~KnILvLG~~~sGKttLi~~L 74 (492) |++-.++..+.|=..+-.-+....+-+ +|..|+||+.|-.++|||+|+..+ T Consensus 5 di~G~~~~k~~l~~~i~~~~~~~~~~~~~g~~~~~giLl~GppGtGKT~la~~i 58 (258) T d1e32a2 5 DVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAV 58 (258) T ss_dssp GCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHH T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHH T ss_conf 572379999999999998620837898477998771788779997366999999 No 99 >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix} Probab=75.43 E-value=1.4 Score=19.85 Aligned_columns=70 Identities=21% Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHC---CCCCCCCCCCEEEEEE Q ss_conf 6544567434406899999999817862278876488860788548999998620---1336787431033530 Q Ver_Hs_NP_0061 22 AGDLTSEEEEGQSLWSSILSEVSTRARSKLPSGKNILVFGEDGSGKTTLMTKLQG---AEHGKKGRGLEYLYLS 92 (492) Q Consensus 22 ~~~~~~~~~~~~~lWssil~eV~~~~~~klp~~KnILvLG~~~sGKttLi~~Lq~---~e~~kkg~gLeY~Yl~ 92 (492) |.++..-+.+-..+-+.++..+..+.... +...++++.|.+++|||+++..+-. ......+....+.|+| T Consensus 15 p~~l~~r~~qi~~i~~~l~~~~~~g~~~~-~~~~~~li~GppGtGKT~~a~~la~~l~~~~~~~~~~~~~v~in 87 (287) T d1w5sa2 15 PPELRVRRGEAEALARIYLNRLLSGAGLS-DVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVN 87 (287) T ss_dssp CSSCSSSCHHHHHHHHHHHHHHHTSSCBC-CEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEE T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCC-CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEC T ss_conf 87541168999999999999985277755-55458888669987489999999998753200001464068851 No 100 >d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae} Probab=74.23 E-value=0.95 Score=21.02 Aligned_columns=25 Identities=40% Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHC Q ss_conf 8876488860788548999998620 Q Ver_Hs_NP_0061 52 PSGKNILVFGEDGSGKTTLMTKLQG 76 (492) Q Consensus 52 p~~KnILvLG~~~sGKttLi~~Lq~ 76 (492) |.+||||++|-+++|||-|-.+|.+ T Consensus 47 ~~pkniLl~GPtGtGKT~LAkalA~ 71 (443) T d1g41a_ 47 VTPKNILMIGPTGVGKTEIARRLAK 71 (443) T ss_dssp CCCCCEEEECCTTSSHHHHHHHHHH T ss_pred CCCCEEEEECCCCCCHHHHHHHHHH T ss_conf 2552158867889857899999999 Done!