[Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Art_Dm_NP_609289.1_CG3769 (368 letters) Database: /data/curated/sequences/fasta/proteomes/nr_So.fa 5,742,111 sequences; 1,979,780,658 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melano... 739 0.0 gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] 662 0.0 gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoob... 590 e-167 gi|157119433|ref|XP_001653379.1| conserved hypothetical protein ... 347 5e-94 gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae s... 346 2e-93 gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [S... 189 4e-46 gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 ... 180 1e-43 gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Dan... 177 1e-42 gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermed... 172 3e-41 gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 lig... 170 1e-40 gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein... 168 6e-40 gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light int... 167 9e-40 gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light inter... 166 2e-39 gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein... 166 2e-39 gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermed... 165 4e-39 gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain is... 164 6e-39 gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] 164 1e-38 gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella... 163 2e-38 gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] 163 2e-38 gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain i... 163 2e-38 gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] 162 3e-38 gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 ligh... 162 4e-38 gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chai... 161 6e-38 gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibencla... 160 9e-38 gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermed... 159 3e-37 gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00... 159 4e-37 gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 ... 146 2e-33 gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chai... 141 7e-32 gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon n... 136 2e-30 gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated fa... 127 1e-27 gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [... 117 1e-24 gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermedi... 102 3e-20 gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermedia... 97 1e-18 gi|115690607|ref|XP_001202918.1| PREDICTED: similar to Dynein, c... 96 4e-18 gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 ligh... 96 4e-18 gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_002... 88 8e-16 gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Tr... 81 1e-13 gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermed... 78 9e-13 gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain i... 77 2e-12 gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Tr... 71 1e-10 gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Tr... 70 2e-10 gi|146097038|ref|XP_001468017.1| dynein light intermediate chain... 70 3e-10 gi|157874331|ref|XP_001685649.1| dynein light intermediate chain... 67 3e-09 gi|158599820|gb|EDP37275.1| hypothetical protein Bm1_12090 [Brug... 65 8e-09 gi|123423641|ref|XP_001306418.1| conserved hypothetical protein ... 65 8e-09 gi|154343515|ref|XP_001567703.1| dynein light intermediate chain... 62 7e-08 gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light int... 61 1e-07 gi|26252194|gb|AAH40558.1| DYNC2LI1 protein [Homo sapiens] 58 1e-06 gi|57092883|ref|XP_531798.1| PREDICTED: similar to dynein 2 ligh... 57 2e-06 gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT0000... 57 3e-06 gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT0001... 54 1e-05 gi|123415018|ref|XP_001304608.1| conserved hypothetical protein ... 52 8e-05 gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermedi... 48 8e-04 gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [G... 48 0.001 gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein... 44 0.012 gi|157128066|ref|XP_001661298.1| dynein light intermediate chain... 43 0.027 gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin li... 42 0.061 gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella... 42 0.072 gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] 41 0.12 gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [S... 41 0.13 gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 ... 41 0.14 gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT0003... 41 0.14 gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light interme... 41 0.17 gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo s... 40 0.18 gi|123401357|ref|XP_001301845.1| small GTP-binding protein, puta... 40 0.26 gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A is... 40 0.32 gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo s... 40 0.34 gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein li... 39 0.41 gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light ... 39 0.45 gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light inter... 39 0.47 gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT0003... 39 0.58 gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermed... 39 0.82 gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae s... 39 0.82 gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermedi... 39 0.83 gi|123473325|ref|XP_001319851.1| Ras family protein [Trichomonas... 38 0.97 gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light inte... 38 1.0 gi|53733161|ref|ZP_00156084.2| COG0809: S-adenosylmethionine:tRN... 38 1.0 gi|145639843|ref|ZP_01795444.1| S-adenosylmethionine:tRNA ribosy... 38 1.0 gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermed... 38 1.1 gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate ... 38 1.1 gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] 38 1.1 gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light int... 38 1.2 gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Di... 37 1.5 gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] 37 1.7 gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermed... 37 1.8 gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermed... 37 1.8 gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic,... 37 1.8 gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Cop... 37 1.8 gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermed... 37 1.8 gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermedi... 37 1.8 gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light inte... 37 1.8 gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculu... 37 1.9 gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light ... 37 2.1 gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermedi... 37 2.6 gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermed... 37 2.6 gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein li... 37 2.8 gi|148472930|emb|CAB07402.3| Hypothetical protein R03E1.3 [Caeno... 37 2.8 gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light ... 37 3.0 gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] 37 3.0 gi|71994503|ref|NP_510359.2| R03E1.3 [Caenorhabditis elegans] 37 3.0 gi|154420577|ref|XP_001583303.1| Ras family protein [Trichomonas... 37 3.2 gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light int... 36 3.4 gi|123452986|ref|XP_001314549.1| small GTP-binding protein, puta... 36 3.7 gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light... 36 4.0 gi|68248853|ref|YP_247965.1| S-adenosylmethionine:tRNA ribosyltr... 36 4.1 gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, is... 35 5.7 gi|66822349|ref|XP_644529.1| hypothetical protein DDBDRAFT_02173... 35 6.5 gi|145513438|ref|XP_001442630.1| hypothetical protein GSPATT0000... 35 8.6 gi|118044652|ref|ZP_01513358.1| hypothetical protein BphytDRAFT_... 35 8.7 gi|123475948|ref|XP_001321149.1| Ras family protein [Trichomonas... 35 9.1 >gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melanogaster] gi|22946025|gb|AAF52775.2| CG3769-PA [Drosophila melanogaster] gi|66770889|gb|AAY54756.1| IP11319p [Drosophila melanogaster] Length = 368 Score = 739 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 368/368 (100%), Positives = 368/368 (100%) Query: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI Sbjct: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 Query: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE Sbjct: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE Sbjct: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 Query: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL Sbjct: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS Sbjct: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 Query: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR Sbjct: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 Query: 361 GKFESVQT 368 GKFESVQT Sbjct: 361 GKFESVQT 368 >gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] Length = 358 Score = 662 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 323/323 (100%), Positives = 323/323 (100%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSP 105 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSP Sbjct: 36 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSP 95 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ Sbjct: 96 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 155 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT Sbjct: 156 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 215 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF Sbjct: 216 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 275 Query: 286 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQ 345 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQ Sbjct: 276 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQ 335 Query: 346 KNEELAGLMRDVLLRGKFESVQT 368 KNEELAGLMRDVLLRGKFESVQT Sbjct: 336 KNEELAGLMRDVLLRGKFESVQT 358 >gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoobscura] gi|54645577|gb|EAL34315.1| GA17674-PA [Drosophila pseudoobscura] Length = 368 Score = 590 bits (1520), Expect = e-167, Method: Composition-based stats. Identities = 295/368 (80%), Positives = 331/368 (89%), Gaps = 1/368 (0%) Query: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 MRLP IF S H+R+ +MF K TEGG++ATPSIQDIAGRLAEEQQRLRQLEAT+ PKERT+ Sbjct: 1 MRLPQIFLSWHKRILRMFEKSTEGGDNATPSIQDIAGRLAEEQQRLRQLEATSMPKERTL 60 Query: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 LVLGSKCVGK+TAINKFFDREEH TRPTLALEYSFGRRIGSG+SPQV+NVWELGSLDNA+ Sbjct: 61 LVLGSKCVGKSTAINKFFDREEHTTRPTLALEYSFGRRIGSGRSPQVINVWELGSLDNAD 120 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 QLLEVPMRTHGLQQLAV +M+DLSQPQRFWTDLECAYKGLR T+Q+++ ++TPELRE LE Sbjct: 121 QLLEVPMRTHGLQQLAVFIMVDLSQPQRFWTDLECAYKGLRVTSQELLARMTPELRETLE 180 Query: 181 QRTVERVGQQNK-DSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGA 239 QRT+ERVG QNK D L+ LPFPV+IVGGKYDVF DP ++K CRCLRSMAH IGGA Sbjct: 181 QRTLERVGHQNKEDLGTLELLPFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGA 240 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 LLFYSQK+PKL+KVLRDTI H+GFGSP+HPFRSHV D NEPL +WFGTDSWS+IGDTGAQ Sbjct: 241 LLFYSQKVPKLSKVLRDTISHMGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDTGAQ 300 Query: 300 SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLL 359 SVERIGATFG+ VPQLQLEKQ + DPAKDPGFKE +IDE+R+QKNEELA +MRDVLL Sbjct: 301 SVERIGATFGVAVPQLQLEKQLQQVPQDPAKDPGFKESLIDEMRAQKNEELATIMRDVLL 360 Query: 360 RGKFESVQ 367 RGKFESVQ Sbjct: 361 RGKFESVQ 368 >gi|157119433|ref|XP_001653379.1| conserved hypothetical protein [Aedes aegypti] gi|108883162|gb|EAT47387.1| conserved hypothetical protein [Aedes aegypti] Length = 347 Score = 347 bits (891), Expect = 5e-94, Method: Composition-based stats. Identities = 176/341 (51%), Positives = 239/341 (70%), Gaps = 10/341 (2%) Query: 29 TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPT 88 T +IQDIA +L E + ++ T P ERTI VLGSK GK+T IN+F DR++ TRPT Sbjct: 15 TETIQDIAMKLVTEHMK-QESSLTGGPTERTIFVLGSKGAGKSTLINRFLDRDD-ITRPT 72 Query: 89 LALEYSFGRRIGSGKSPQ--VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LALEYSFGRR SG+ Q + NVWELGSL N+ QL+EVP+R+HGL A +++LDLSQP Sbjct: 73 LALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAAFAAVIVLDLSQP 132 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVII 206 R WTDL+C GL+ Q + + +P+ +++R ++VG ++D L+ LPFPVII Sbjct: 133 DRLWTDLQCILNGLK---QAISKNCSPKEVSEMQERMKQKVGLDHEDLNTLEILPFPVII 189 Query: 207 VGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 VGGKYD F D I+KH CRCLRS++H IG AL+FY+ K L+K++RD + HLGFGSP Sbjct: 190 VGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRDAMNHLGFGSP 249 Query: 267 AHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETT 326 ++PF++ +D N P+ + FG DSW KIG T S ERIG ++ ++PQ+ EK + + Sbjct: 250 SNPFKATALDHNGPIVVPFGGDSWEKIGVTPTNS-ERIGMSYSAQIPQVGTEKVSIPD-- 306 Query: 327 DPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQ 367 DPAKD GFKE VIDE+R+QK++EL L++D +R KFE+VQ Sbjct: 307 DPAKDGGFKERVIDELRAQKDDELMRLLKDTEMRMKFEAVQ 347 >gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae str. PEST] gi|116118470|gb|EAA13896.3| AGAP010165-PA [Anopheles gambiae str. PEST] Length = 339 Score = 346 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 179/342 (52%), Positives = 239/342 (69%), Gaps = 11/342 (3%) Query: 29 TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPT 88 T +IQDIA +L EQ R + TTP ERT+ VLGSK VGK+T IN+F DR++ RPT Sbjct: 6 TETIQDIAIKLVTEQLR-NESRLATTPTERTLFVLGSKGVGKSTLINRFLDRDD-VPRPT 63 Query: 89 LALEYSFGRRIGSGKSPQ--VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LALEYSFGR+ SG+ Q + NVWELGSL N+ QL+E+P+R+HGLQ + I+MLDLSQP Sbjct: 64 LALEYSFGRKTASGQGAQKNICNVWELGSLANSSQLIEMPIRSHGLQTFSCIVMLDLSQP 123 Query: 147 QRFWTDLECAYKGLRD-TAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 R WTDLE GL+ TA+ + E++E+ T +R+G+++ D L+ PFP++ Sbjct: 124 DRLWTDLESVLNGLKQATAKHAVAGQIEEMKEL----TAQRIGKEHPDLSTLELFPFPIV 179 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 IVGGKYD++ D IRKH CRCLRS+AH +G AL++YS K L+K++RDT+ HLGFGS Sbjct: 180 IVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRDTMNHLGFGS 239 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKET 325 P++PFR+ D + PL I FG DSW++IG T + S ERIG +F ++PQL + + Sbjct: 240 PSNPFRAASFDHSSPLAIPFGADSWARIGVTPSNS-ERIGLSFSTQIPQLPIGNGGIL-P 297 Query: 326 TDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQ 367 DPAKD GFKE IDE+RSQK+EEL +++D +R KFE VQ Sbjct: 298 DDPAKDAGFKEASIDELRSQKDEELMYVLKDTEIRMKFEVVQ 339 >gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115941395|ref|XP_001177851.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 363 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 119/346 (34%), Positives = 182/346 (52%), Gaps = 16/346 (4%) Query: 31 SIQDIAGRLAEEQQRLRQLEATTTPK--ERTILVLGSKCVGKTTAINKFFDREEHATRPT 88 SI DIA AE++ E K E IL +GSK GKT+ I +F ++EE A +PT Sbjct: 8 SIWDIAILEAEQKHATESKEQGGEAKGSENHILFIGSKNAGKTSIILRFLEKEE-APKPT 66 Query: 89 LALEYSFGRRI-GSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQ 147 +ALEY+FGRR G + ++WELG QL E+P+ + ++++++DLSQP Sbjct: 67 IALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDLSQPY 126 Query: 148 RFWTDLECAYKGLRDTAQQMMEKVT---PELREILEQRTVERVGQQNKDSEKLDPLPFPV 204 W +E KG D +Q++ K P++++ +++R +R+G + D + LDP P P+ Sbjct: 127 ELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHPDRDMLDPFPLPL 186 Query: 205 IIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 +IVG KYDV+ FDP RK + LR +AH G AL F S K L ++ + HL FG Sbjct: 187 VIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTKNLVSHLAFG 246 Query: 265 SPAHPFRSHVVDFNEPLCIWFGTDSWSKIG-------DTGAQSVERIGATFGMEVPQLQL 317 + ++ +D N+P+ + FG DS +IG D G + + Sbjct: 247 TTL-SLKTISIDPNKPISVPFGLDSLEQIGLPPVADDDLGRSNARTPLDLWKQAFTSYFP 305 Query: 318 EKQKLKETT-DPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 +K +K DP+KDP + E +D +R QKN+EL + R K Sbjct: 306 QKSTIKAIVEDPSKDPQYAEAAVDNMREQKNKELERYRKQAERRAK 351 >gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 light intermediate chain [Apis mellifera] Length = 345 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 109/343 (31%), Positives = 196/343 (57%), Gaps = 24/343 (6%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 +++ +++DIA R E+++ R+ T ER+I+++GSK VGKTT +++F +++E A Sbjct: 4 QNSEENVRDIALRFCLEEEQRRKTNPNET-HERSIIIVGSKRVGKTTIVHRFLEKDE-AP 61 Query: 86 RPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMR----THGLQQLAVILML 141 +PT+A++YSFGR+ G +++VWE+G L ++ L+ M TH + ++++L Sbjct: 62 KPTIAMDYSFGRKAGKSLIKNIVHVWEVGHLTSS--LVSAAMTGSSLTHSPHHVTILVIL 119 Query: 142 DLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK-LDPL 200 DLSQP+ WT E A +R+ + + +I+++ +R+ ++ K EK +DP Sbjct: 120 DLSQPEILWTTFEEALSVVRNAMKMSYDD------KIIQELKKQRIKERKKIVEKEIDPF 173 Query: 201 PFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICH 260 P + +GGKYD F D ++ + LR++AH++G +L ++S K L + ++D + + Sbjct: 174 PMRLCFIGGKYDQFKDLDLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIKDLLSY 233 Query: 261 LGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS-----VERIGATFGMEVPQL 315 GFG+ + DF +PL I GTDS+S I Q+ ++ I + +PQ Sbjct: 234 YGFGTQFSDIK--CTDFEKPLAISAGTDSFSSIDLQFPQTRPSAMLDTIKQIYVTHIPQE 291 Query: 316 QLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 + + E DP+ DP F E +ID +R+Q+ EE+ L+ D+L Sbjct: 292 SRSNEIILE--DPSNDPNFNEPIIDRLRTQREEEINILLHDML 332 >gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Danio rerio] gi|32766386|gb|AAH55198.1| Zgc:63673 [Danio rerio] Length = 358 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 118/317 (37%), Positives = 178/317 (56%), Gaps = 22/317 (6%) Query: 55 PKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWEL 113 P +RT+ +GSK GKTT + +F +R+E A +PTLALEY+FGRR +P+ + ++WEL Sbjct: 37 PSQRTVFFMGSKAGGKTTILLRFLERDETA-KPTLALEYTFGRRARGHNTPKDIAHLWEL 95 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 G + L+++P+ + L+V+L+LDLS+P W +E L +A+ +EKV Sbjct: 96 GGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETME----SLLGSARNQVEKVCA 151 Query: 174 ELREILEQRT----VERVGQQN-KDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 L++ E R+ V RV ++ D E + P P P++IVG K+D+F FD RK C+ Sbjct: 152 ALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKT 211 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 LR +AH G +L+F S K R I L FG+ P +S D ++PL I G+D Sbjct: 212 LRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGT-ERP-KSISTDPSKPLAIPAGSD 269 Query: 289 SWSKIGDTGAQSVE--RIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVI 339 S S+IG A V+ + A ++ + EK ++ KE DP KDP F E +I Sbjct: 270 SLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLI 329 Query: 340 DEIRSQKNEELAGLMRD 356 D IR+QK++EL R+ Sbjct: 330 DSIRAQKDQELDQYKRE 346 >gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|20988526|gb|AAH30450.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|24659541|gb|AAH39070.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 351 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 110/312 (35%), Positives = 168/312 (53%), Gaps = 17/312 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E A +PTLALEY++GR+ +P+ + + WELG Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDESA-KPTLALEYTYGRKTKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC---AYKGLRDTAQQMMEKVT 172 + L+ +P+ L+ +++L+LDLS+P W+ +E A K D + K + Sbjct: 90 GTSLLDLISIPITVDTLRTFSIVLVLDLSKPNDLWSTMENLLQATKSHVDKVIMKLGKTS 149 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + QR V + + D E +DP P P++I+G KYD+F FDP RK C+ LR + Sbjct: 150 SKASAEMRQRMWSVVQKDHPDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFV 209 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L K+ R I L FG +S VD N+PL I G DS + Sbjct: 210 AHYYGASLMFTSKSEALLLKI-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSLCQ 266 Query: 293 IGDTGA--QSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A ME+ + +K LK DPA+DP + E +DE+R Sbjct: 267 IGSPPVPDSDIGKLQAHSPMELWKKVYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMR 326 Query: 344 SQKNEELAGLMR 355 QK++EL R Sbjct: 327 VQKDQELEHYKR 338 >gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 light intermediate chain [Gallus gallus] Length = 637 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 118/374 (31%), Positives = 196/374 (52%), Gaps = 24/374 (6%) Query: 2 RLPLIFHSLHQRLQKMFVKRTEGGE--SATPSIQDIAGRLAEEQQRLRQLEATTTPK--- 56 RLP L +RL +R G +A P D +A ++ R+ + Sbjct: 256 RLPAELQ-LPERLAPFPWRRAAGPGRIAAMPKAGDTLWDIARDEVEKRENNGDDGKRVEV 314 Query: 57 -ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELG 114 E+++L +GSK GKTT I + +REE +PTL LEY+FGRR +P+ + + WE+G Sbjct: 315 CEKSVLFMGSKNGGKTTIILRCLEREE-VPKPTLVLEYTFGRRARRHNAPKDIAHFWEIG 373 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM---EKV 171 + +L+ +P+ + ++ AV+L+LDLS+P W +E + R+ +++ EK Sbjct: 374 GGTSLLELIRIPITVNNIRSFAVVLVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKT 433 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 PE+ ++Q+ + + + D + +DP P P++I+G KYD+F FD +RK R LR Sbjct: 434 DPEVAAEIKQKMQNNLQRDHPDYDLVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRF 493 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 ++H G +L+F S+ L K R I HL FG +S VD ++PL I G DS S Sbjct: 494 VSHYYGASLVFTSKSEALLLKA-RALINHLAFGYDRS--KSVSVDHSKPLFIPAGLDSLS 550 Query: 292 KIG--DTGAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEI 342 +IG T ++ ++ A +E+ + EK L+++ DPA+ + E +D + Sbjct: 551 QIGPPPTSDSNIGKMRANTPLELWKKVFEKTFPPRSFSDLQDSKDPAQVSQYAEYEVDVM 610 Query: 343 RSQKNEELAGLMRD 356 R+QKN+E R+ Sbjct: 611 RAQKNQEFEQYKRN 624 >gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 387 Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 107/307 (34%), Positives = 166/307 (54%), Gaps = 17/307 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E +PTLALEY++GRR +P+ + + WELG Sbjct: 67 EKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 125 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC---AYKGLRDTAQQMMEKVT 172 + L+ +P+ L+ +++L+LDLS+P W +E K D + K + Sbjct: 126 GTSLLDLISIPITNESLRTFSLVLVLDLSKPNDLWPTMESLLQVTKAHVDKLIMKLGKTS 185 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + Q+ + + + D E +DP P P++I+G KYD+F FD RK C+ LR + Sbjct: 186 TKAASEMRQKMWSNMQKDHPDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKIICKTLRFV 245 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 +H G +L+F S+ L K+ R I L FG +S VD N+PL I G DS S+ Sbjct: 246 SHYYGASLMFASKSEALLLKI-RGVINQLAFGIDKS--KSISVDQNKPLFIPAGLDSLSQ 302 Query: 293 IGDT--GAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A ME+ + EK KET DPA+DP + E +DE+R Sbjct: 303 IGSPPLSENEIGKLHAQTPMELWKKVYEKVFPPKSANTSKETRDPARDPQYAESEVDEMR 362 Query: 344 SQKNEEL 350 +QK++EL Sbjct: 363 AQKDQEL 369 >gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] gi|81673547|gb|AAI09911.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] Length = 351 Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 108/312 (34%), Positives = 167/312 (53%), Gaps = 17/312 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E +PTLALEY++GRR P+ + + WELG Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRTKGHNIPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR---DTAQQMMEKVT 172 + L+ +P+ + L+ +++L+LDLS+P W +E + + D + K Sbjct: 90 GTSLLDLISIPITSDTLRTFSIVLVLDLSKPNDLWPTMENLLQATKLNIDKVIMKLGKKN 149 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + Q+ + + + D E LDP P P++I+G KYD+F FD RK C+ LR + Sbjct: 150 SKAASEMRQKMWSNMQKDHPDRELLDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFV 209 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L K+ R I L FG + +S VD N+PL I G DS S+ Sbjct: 210 AHYYGASLMFTSKSEALLLKI-RGVINQLAFG--INKSKSICVDQNKPLFITAGLDSLSQ 266 Query: 293 IGDTGA--QSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A M++ + EK LK+ DPAKDP + E +DE+R Sbjct: 267 IGPPPLPDNDIGKLHARSPMDLWKKVYEKLFPPKSINTLKDVKDPAKDPQYAESEVDEMR 326 Query: 344 SQKNEELAGLMR 355 QK++EL R Sbjct: 327 IQKDQELEQYKR 338 >gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light intermediate chain isoform 1 [Pan troglodytes] Length = 351 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 108/312 (34%), Positives = 167/312 (53%), Gaps = 17/312 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E +PTLALEY++GRR +P+ + + WELG Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC---AYKGLRDTAQQMMEKVT 172 + L+ +P+ + L+ +++L+LDLS+P W +E A K D + K Sbjct: 90 GTSLLDLISIPITSDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTN 149 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + Q+ + + + D E +DP P P++I+G KYDVF F+ RK C+ LR + Sbjct: 150 AKAVSEMRQKIWNNMQKDHPDRELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFV 209 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L K+ R I L FG +S VD N+PL I G DS+ + Sbjct: 210 AHYYGASLMFTSKSEALLLKI-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSFGQ 266 Query: 293 IGD--TGAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A ME+ + EK LK+ DPA+DP + E +DE+R Sbjct: 267 IGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINMLKDIKDPARDPQYAESEVDEMR 326 Query: 344 SQKNEELAGLMR 355 QK++EL R Sbjct: 327 IQKDQELEQYKR 338 >gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein [Equus caballus] Length = 351 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 104/312 (33%), Positives = 168/312 (53%), Gaps = 17/312 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E +PTLALEY++GR+ P+ + + WELG Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRKAKGHNIPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV---T 172 + L+ +P+ + L+ +++L+LDLS+P W +E + + +++ K+ Sbjct: 90 GTSLLDLISIPITSDTLRTFSIVLVLDLSKPNDLWPTMENLLQATKSHVNKVIMKLGKKN 149 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + Q+ + + + D E +DP P P++I+G KYD+F FD RK C+ LR + Sbjct: 150 SKASSEMRQKIWSNMQKDHPDREIIDPFPIPLVIIGSKYDIFQDFDSEKRKVICKTLRFV 209 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L K+ R I L FG +S VD N+PL I G DS S+ Sbjct: 210 AHYYGASLMFTSKSEALLLKI-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSLSQ 266 Query: 293 IGDTGA--QSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A ME+ + E+ LK+ DPA+DP + E +DE+R Sbjct: 267 IGSPPVPDNDIGKLHARSPMELWKKVYERLFPPKNTNTLKDIKDPARDPQYAESEVDEMR 326 Query: 344 SQKNEELAGLMR 355 QK++EL R Sbjct: 327 IQKDQELEQYKR 338 >gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermediate chain isoform 2 [Pan troglodytes] Length = 334 Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats. Identities = 106/308 (34%), Positives = 166/308 (53%), Gaps = 17/308 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E +PTLALEY++GRR +P+ + + WELG Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC---AYKGLRDTAQQMMEKVT 172 + L+ +P+ + L+ +++L+LDLS+P W +E A K D + K Sbjct: 90 GTSLLDLISIPITSDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTN 149 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + Q+ + + + D E +DP P P++I+G KYDVF F+ RK C+ LR + Sbjct: 150 AKAVSEMRQKIWNNMQKDHPDRELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFV 209 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L K+ R I L FG +S VD N+PL I G DS+ + Sbjct: 210 AHYYGASLMFTSKSEALLLKI-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSFGQ 266 Query: 293 IGD--TGAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A ME+ + EK LK+ DPA+DP + E +DE+R Sbjct: 267 IGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINMLKDIKDPARDPQYAESEVDEMR 326 Query: 344 SQKNEELA 351 QK++ L+ Sbjct: 327 IQKDQVLS 334 >gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain isoform 1 variant [Homo sapiens] Length = 351 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 109/312 (34%), Positives = 165/312 (52%), Gaps = 17/312 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E +PTLALEY++GRR +P+ + + WELG Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC---AYKGLRDTAQQMMEKVT 172 + L+ +P+ L+ +++L+LDLS+P W +E A K D + K Sbjct: 90 GTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTN 149 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + Q+ + + + D E +DP P P++I+G KYDVF F+ RK C+ LR + Sbjct: 150 AKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFV 209 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L K LR I L FG +S VD N+PL I G DS+ + Sbjct: 210 AHYYGASLMFTSKSEALLLK-LRGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSFGQ 266 Query: 293 IGD--TGAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A ME+ + EK LK+ DPA+DP + E +DE+R Sbjct: 267 IGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMR 326 Query: 344 SQKNEELAGLMR 355 QK+ EL R Sbjct: 327 IQKDLELEQYKR 338 >gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] Length = 318 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 106/304 (34%), Positives = 162/304 (53%), Gaps = 17/304 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E +PTLALEY++GRR +P+ + + WELG Sbjct: 15 EKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 73 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC---AYKGLRDTAQQMMEKVT 172 + L+ +P+ L+ +++L+LDLS+P W +E A K D + K Sbjct: 74 GTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTN 133 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + Q+ + + + D E +DP P P++I+G KYDVF F+ RK C+ LR + Sbjct: 134 AKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFV 193 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L K LR I L FG +S VD N+PL I G DS+ + Sbjct: 194 AHYYGASLMFTSKSEALLLK-LRGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSFGQ 250 Query: 293 IGD--TGAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A ME+ + EK LK+ DPA+DP + E +DE+R Sbjct: 251 IGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMR 310 Query: 344 SQKN 347 QK+ Sbjct: 311 IQKD 314 >gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella vectensis] gi|156226126|gb|EDO46938.1| predicted protein [Nematostella vectensis] Length = 366 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 109/347 (31%), Positives = 178/347 (51%), Gaps = 26/347 (7%) Query: 24 GGESATPSIQDIA----GRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD 79 G + + +I D+A L E ++ E++ +E I ++GSK GKT+ + +F D Sbjct: 2 GDKRSDKTIWDLAIEERDYLLNEAKKKGTQESSPHGEEAGIFLIGSKNAGKTSMVLRFLD 61 Query: 80 REEHATRPTLALEYSFGRRI-GSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 R+E +PT AL+Y+FGR+ G + V ++WELG +L+++P+ ++ L++I Sbjct: 62 RDE-VPKPTTALDYTFGRKAKGHNIAKDVGHIWELGGGTFLSKLIDIPINVDSVRGLSII 120 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT---PELREILEQRTVERVGQQNKDSE 195 + LDLS P W +E ++ ++M+++ P + L E+ G + D Sbjct: 121 IFLDLSLPNELWHTMETLLNQVKKRVHKVMDELAAKNPSAVQKLRNDAWEKFGTDHPDKS 180 Query: 196 KLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLR 255 ++P P P+ IVGGKYD++ FDP RK R LR +AH G L F+S K L R Sbjct: 181 FVEPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGRSR 240 Query: 256 DTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIG---------- 305 I HL F + ++ VD N+P+ + G DS ++IG S E +G Sbjct: 241 GMIGHLLFHTSLG--KAIGVDHNKPIIVSAGQDSLAQIGAPPVAS-EDLGRLQSRNPYDL 297 Query: 306 --ATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEEL 350 A + P + ++ +E DP+KDP + E +D +R QK+EEL Sbjct: 298 WKAAYATFFPPEKSKQHSDRE--DPSKDPQYFEAAVDAMRKQKDEEL 342 >gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] Length = 341 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 162/303 (53%), Gaps = 17/303 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E A +PTLALEY++GR+ +P+ + + WELG Sbjct: 31 EKSLFFIGSKNGGKTTIILRCLDRDESA-KPTLALEYTYGRKTKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC---AYKGLRDTAQQMMEKVT 172 + L+ +P+ L+ +++L+LDLS+P W+ +E A K D + K + Sbjct: 90 GTSLLDLISIPITVDTLRTFSIVLVLDLSKPNDHWSTMENLLQATKSHVDKVIMKLGKTS 149 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + QR V + + D E +DP P P++I+G KYD+F FDP RK C+ LR + Sbjct: 150 SKASAEMRQRMWSVVQKDHPDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFV 209 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L K+ R I L FG +S VD N+PL I G DS + Sbjct: 210 AHYYGASLMFTSKSEALLLKI-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSLCQ 266 Query: 293 IGDTGA--QSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A ME+ + +K LK DPA+DP + E +DE+R Sbjct: 267 IGSPPVPDSDIGKLQAHSPMELWKKVYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMR 326 Query: 344 SQK 346 + Sbjct: 327 GSE 329 >gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain isoform 1 [Homo sapiens] gi|19908231|gb|AAL99216.1| dynein 2 light intermediate chain [Homo sapiens] gi|119620696|gb|EAX00291.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_c [Homo sapiens] Length = 351 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 108/312 (34%), Positives = 164/312 (52%), Gaps = 17/312 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+ + +GSK GKTT I + DR+E +PTLALEY++GRR +P+ + + WELG Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC---AYKGLRDTAQQMMEKVT 172 + L+ +P+ L+ +++L+LDLS+P W +E A K D + K Sbjct: 90 GTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTN 149 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + Q+ + + + D E +DP P P++I+G KYDVF F+ RK C+ LR + Sbjct: 150 AKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFV 209 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L K+ R I L FG +S VD N+PL I G DS+ + Sbjct: 210 AHYYGASLMFTSKSEALLLKI-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSFGQ 266 Query: 293 IGD--TGAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A ME+ + EK LK+ DPA+DP + E +DE+R Sbjct: 267 IGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMR 326 Query: 344 SQKNEELAGLMR 355 QK+ EL R Sbjct: 327 IQKDLELEQYKR 338 >gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] Length = 350 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 106/311 (34%), Positives = 166/311 (53%), Gaps = 16/311 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+ + +GSK GKTT I + DR+E +PTLALEY++GRR +P+ + + WELG Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV-TPE 174 + L+ +P+ L+ +++L+LDLS+P W +E + + +++ K+ Sbjct: 90 GTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTN 149 Query: 175 LREILEQRT-VERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA 233 + + E R + + + D E +DP P P++I+G KYDVF F+ RK C+ LR +A Sbjct: 150 AKAVSEMRQKIWNYAEDHPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFVA 209 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 H G +L+F S+ L K+ R I L FG +S VD N+PL I G DS+ +I Sbjct: 210 HYYGASLMFTSKSEALLLKI-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSFGQI 266 Query: 294 GD--TGAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIRS 344 G + ++ A ME+ + EK LK+ DPA+DP + E +DE+R Sbjct: 267 GSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMRI 326 Query: 345 QKNEELAGLMR 355 QK+ EL R Sbjct: 327 QKDLELEQYKR 337 >gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 2 [Canis familiaris] Length = 348 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 105/312 (33%), Positives = 166/312 (53%), Gaps = 17/312 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E +PTLALEY++GRR P+ + + WELG Sbjct: 28 EKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNIPKDIAHFWELGG 86 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV---T 172 + L+ +P+ + L+ +++L+LDLS+P W +E + + +M+ K+ Sbjct: 87 GTSLLDLISIPITSDNLRTFSIVLVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTN 146 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + Q+ + + + D E +DP P++I+G KYD+F FD RK C+ LR + Sbjct: 147 SKAVSEMRQKIWSNMQKDHPDRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVICKTLRFV 206 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L KV R I L FG +S VD N+PL I G DS S+ Sbjct: 207 AHYYGASLMFTSKSEALLLKV-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSLSQ 263 Query: 293 IGDTGA--QSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A M++ + E+ LK DPA+DP + E +DE+R Sbjct: 264 IGSPPIPDNDIGKLHAHSPMDLWKKVYERVFPPKSTNTLKHIKDPARDPQYAEGEVDEMR 323 Query: 344 SQKNEELAGLMR 355 QK++EL R Sbjct: 324 IQKDQELEQYKR 335 >gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chain isoform 3 [Homo sapiens] Length = 334 Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats. Identities = 105/304 (34%), Positives = 161/304 (52%), Gaps = 17/304 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+ + +GSK GKTT I + DR+E +PTLALEY++GRR +P+ + + WELG Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC---AYKGLRDTAQQMMEKVT 172 + L+ +P+ L+ +++L+LDLS+P W +E A K D + K Sbjct: 90 GTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTN 149 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + Q+ + + + D E +DP P P++I+G KYDVF F+ RK C+ LR + Sbjct: 150 AKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFV 209 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L K+ R I L FG +S VD N+PL I G DS+ + Sbjct: 210 AHYYGASLMFTSKSEALLLKI-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSFGQ 266 Query: 293 IGD--TGAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A ME+ + EK LK+ DPA+DP + E +DE+R Sbjct: 267 IGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMR 326 Query: 344 SQKN 347 QK+ Sbjct: 327 IQKD 330 >gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibenclamide-sensitive voltage-gated potassium channel, partial [Ornithorhynchus anatinus] Length = 449 Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats. Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 17/303 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E A RPTLALEY+FGRR +P+ + + WELG Sbjct: 24 EKSVFFVGSKNGGKTTIILRCLDRDEPA-RPTLALEYTFGRRARGHNTPKDIAHFWELGG 82 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L +P+ L+ A + LDLS+P W E + +R + + + P Sbjct: 83 GTSLLDLARIPITADSLRTFATDIFLDLSRPSELWLTAEHLLRAVRTHVENLGQ---PGT 139 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 R RT V + + D E +DP P P++I+G KYDVF D RK CR LR +AH Sbjct: 140 RAAATPRTWSPVPEDHPDREFIDPFPIPLVIIGSKYDVFQNLDSEKRKVICRTLRFLAHH 199 Query: 236 IGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG- 294 G L+F + L K R I HL FG ++ +D N+PL I G DS+S+IG Sbjct: 200 HGATLMFTGKSEALLLKT-RSVISHLAFGVGVDRSKALTLDQNKPLFIPAGLDSFSQIGP 258 Query: 295 -DTGAQSVERIGATFGMEVPQ--------LQLEKQKLKETTDPAKDPGFKELVIDEIRSQ 345 + A + ++ +E+ + LQ + + K+ DP +DP + E +D +R+Q Sbjct: 259 PPSAAGDIGKLRVQTPLELWKEVYNKAFPLQTKSDR-KDLKDPGRDPQYAEREVDAMRAQ 317 Query: 346 KNE 348 K++ Sbjct: 318 KDQ 320 >gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|62822153|gb|AAY14702.1| unknown [Homo sapiens] gi|119620694|gb|EAX00289.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 352 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 105/313 (33%), Positives = 165/313 (52%), Gaps = 18/313 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+ + +GSK GKTT I + DR+E +PTLALEY++GRR +P+ + + WELG Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV---- 171 + L+ +P+ L+ +++L+LDLS+P W +E + + +++ K+ Sbjct: 90 GTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTN 149 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 + E+ ++ +D E +DP P P++I+G KYDVF F+ RK C+ LR Sbjct: 150 AKAVSEMRQKIWNNMPKDHPQDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRF 209 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 +AH G +L+F S+ L K+ R I L FG +S VD N+PL I G DS+ Sbjct: 210 VAHYYGASLMFTSKSEALLLKI-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSFG 266 Query: 292 KIGD--TGAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEI 342 +IG + ++ A ME+ + EK LK+ DPA+DP + E +DE+ Sbjct: 267 QIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPARDPQYAENEVDEM 326 Query: 343 RSQKNEELAGLMR 355 R QK+ EL R Sbjct: 327 RIQKDLELEQYKR 339 >gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00000012631 [Nasonia vitripennis] Length = 357 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 111/348 (31%), Positives = 182/348 (52%), Gaps = 33/348 (9%) Query: 33 QDIAGRLAEEQQRLRQLEATTTPKE---RTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 QD A LA + + T P+E +++++LGS+ VGKTT I +F ++E+ +PTL Sbjct: 8 QDNARELALQASIQEDTQRKTDPEESHEKSLIILGSREVGKTTMIYRFLEKED-TPKPTL 66 Query: 90 ALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMR----THGLQQLAVILMLDLSQ 145 A++YS+GR+ G V++VWE+G L A L+ MR +H V++MLDL + Sbjct: 67 AMDYSYGRKAGKSLVKDVVHVWEVGHL--APSLISGSMRGCTLSHSAHHTTVLIMLDLGK 124 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTV----ERVGQQNKDSEKL-DPL 200 P W LE +R MM EL L +R + ER +D + DP Sbjct: 125 PDVLWNSLEECLVAVR---AAMMMSYQQELVHDLRERKIRYLRERAKPGTEDEPPVDDPF 181 Query: 201 PFPVIIVGGKYDVF----SGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRD 256 P + ++GGKYD F SG D ++ + LR+ AH++G L ++S K L + ++ Sbjct: 182 PMRLCLIGGKYDEFRELHSGDD---KESIGQALRAAAHVLGAGLHYHSAKDSHLLRRTKE 238 Query: 257 TICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG-----DTGAQSVERIGATFGME 311 + H GF ++ V D+++PL + G+DS+S I + A +++ I + Sbjct: 239 LLSHYGF--KGQSTKASVTDYDKPLSVAAGSDSFSAIDLKISRNDYAVTLDEIKQIYVRR 296 Query: 312 VPQLQLEKQKLK-ETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 PQ+ + L + DPA DP F E ++D +R Q+ +E++ L+RD+L Sbjct: 297 FPQVPKNQDVLPGDMDDPANDPNFNEPIVDRLRLQREQEISVLLRDML 344 >gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 [Macaca mulatta] Length = 365 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 15/311 (4%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSL 116 E+++ +GSK GKTT I + DR+ G + + WELG Sbjct: 45 EKSVFFIGSKNGGKTTIILRCLDRDRPPKMVLFLFFSFSFCHPGWSTPKDIAHFWELGGG 104 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV---TP 173 + L+ VP+ + L+ +++L+LDLS+P W +E + + +M+ K+ P Sbjct: 105 TSLLDLISVPITSDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKMIMKLGKTNP 164 Query: 174 ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA 233 + + Q+ + + + D E +DP P P++I+G KYD+F F+ RK C+ LR +A Sbjct: 165 KAASEMRQKIWNNMQKDHPDRELIDPFPVPLVIIGSKYDIFQDFESEKRKVICKTLRFVA 224 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 H G +L+F S+ L K+ R I L FG +S VD N+PL I G DS+S+I Sbjct: 225 HYYGASLMFTSKSEALLLKI-RGVINQLAFGIDKS--KSICVDQNKPLLITAGLDSFSQI 281 Query: 294 GD--TGAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIRS 344 G + ++ A ME+ + EK LK DPA+DP + E +DE+R Sbjct: 282 GSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKNIKDPARDPQYAESEVDEMRI 341 Query: 345 QKNEELAGLMR 355 QK++EL R Sbjct: 342 QKDQELEQYKR 352 >gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chain [Rattus norvegicus] gi|50927372|gb|AAH79201.1| Dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 311 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 6/212 (2%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E A +PTLALEY++GR+ +P+ + + WELG Sbjct: 31 EKSVFFIGSKNGGKTTIILRCLDRDEPA-KPTLALEYTYGRKTKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC---AYKGLRDTAQQMMEKVT 172 + L+ +P+ L+ +++L+LDLS+P W +E A K D + K Sbjct: 90 GTSLLDLISIPITVDTLRTFSIVLVLDLSKPNDLWPTMENLLQATKSHVDKVTMKLGKAN 149 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + QR + + + D E +DP P P++I+G KYD+F FDP RK C+ LR + Sbjct: 150 SKASSEMRQRMWSVMQKDHPDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFV 209 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 AH G +L+F S+ L K +R I L FG Sbjct: 210 AHYYGASLMFTSKSEALLLK-MRGVINQLAFG 240 >gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 100/322 (31%), Positives = 156/322 (48%), Gaps = 30/322 (9%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 ERT+ ++GSK GKT+ + K DR+E ++PTLALEY+FGRR +P+ + ++WELG Sbjct: 34 ERTVFLMGSKAGGKTSILLKCLDRDE-PSKPTLALEYTFGRRARGHNTPKDIAHIWELGG 92 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV---- 171 L+++P+ + L+ L+VIL++DLS+P W E L Q +EK Sbjct: 93 GTFLSDLVQIPITSADLKFLSVILIVDLSKPNELWGTTE----KLLQVTQAHLEKAFSMA 148 Query: 172 ------TPELREILEQRTVERVGQQN-KDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKH 224 P ++ RV + D E + P P++IVG KYD+F FD +K Sbjct: 149 QKAQTAKPAATHQTATQSAARVLPADYPDRELISAFPVPLLIVGSKYDIFQEFDSDKKKL 208 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 + LR +AH +L+ Q ++ +D +PL I Sbjct: 209 IAQMLRFVAHSYAASLIVIHQXXXXXXXXXXXXX-XXXXXXXXXXXKTVSMDLTKPLIIP 267 Query: 285 FGTDSWSKIGDTGAQSVERIGATFGMEVPQ----------LQLEKQKLKETTDPAKDPGF 334 G+DS+S+IG A V+ A+ P+ EK+ ++ DPAKDP + Sbjct: 268 AGSDSFSQIGSPCAADVDI--ASLHARNPKDLWRKVCGCVFPPEKEHQQDLKDPAKDPQY 325 Query: 335 KELVIDEIRSQKNEELAGLMRD 356 E ID +R+QK++EL R+ Sbjct: 326 SEPQIDAMRAQKDQELEQYKRN 347 >gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated family member (xbx-1) [Caenorhabditis elegans] gi|77799271|emb|CAB01645.2| Hypothetical protein F02D8.3 [Caenorhabditis elegans] Length = 370 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 96/341 (28%), Positives = 165/341 (48%), Gaps = 32/341 (9%) Query: 38 RLAEEQQRLRQLEATTTPK---------ERTILVLGSKCVGKTTAINKFFDREEHATRPT 88 R AE +Q+L T + E I+ G++ GK++ + F +R+E + + Sbjct: 17 RAAELKQKLDDENGTQSDNYLSEVRRRHESHIIFAGNRKSGKSSFMLNFLERKED-LKDS 75 Query: 89 LALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 + LEY++ RR G + N+WELG +LL VP+ ++ ++IL+LD++ Sbjct: 76 VGLEYTYARRT-RGNVKDIANLWELGGGATVTELLSVPITMKNVEICSLILLLDMTNLDE 134 Query: 149 FWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKL-DPLPFPVIIV 207 W +E +R + + E+ L+ L ++ R+ + + S K+ +P P PV IV Sbjct: 135 MWITIEKTVDSVRRLVENL-ERQDINLQTRLAEKMRLRLEKYDDGSLKMCNPCPIPVTIV 193 Query: 208 GGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA 267 KYD F F+ R+H C+ LR +A+ G L+ +S +M + K++++ H FG+ Sbjct: 194 ASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPKLVKNMTSHFAFGTVC 253 Query: 268 HPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV---------PQ---- 314 + ++ D N+P+ + G DS IG A S +GA+ + PQ Sbjct: 254 P--QGYMTDHNKPMFVKCGFDSLESIGIPPA-SDNFMGASSPFNLWRESFISLWPQKTGT 310 Query: 315 LQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMR 355 + +E K + DP DP FKE ID + K +EL +R Sbjct: 311 IDIEDTKKQ---DPMIDPVFKEPNIDNLVEIKRKELKNHIR 348 >gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] gi|39583371|emb|CAE66345.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] Length = 366 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 78/277 (28%), Positives = 136/277 (49%), Gaps = 14/277 (5%) Query: 89 LALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 + LE+++ RR G V N+WELG + +LL VP+ ++ ++I++LD++ Sbjct: 72 IGLEFTYARRT-RGNVKDVANLWELGGGSSVTELLSVPITAKNVETCSLIVLLDMTNLSE 130 Query: 149 FWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKL-DPLPFPVIIV 207 W +E +R + + E+ L+ + +++ R+ + S K+ P P P+ IV Sbjct: 131 MWITIEKTVDTVRRLVENL-ERQDANLQTRMAEKSRLRLEKYESSSLKMCAPCPLPMTIV 189 Query: 208 GGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA 267 KYD F F+ R+H C+ LR +A+ G L+ YS +M + K++++ I H FG+ Sbjct: 190 ATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPKLVKNMISHFAFGTVC 249 Query: 268 HPFRSHVVDFNEPLCIWFGTDSWSKIG-DTGAQSVERIGATFGM-EVPQLQLEKQKL--- 322 + ++ D N+P+ I G D+ IG G+ + + F + + L QK Sbjct: 250 P--QGYITDHNKPMFIKCGFDNLEAIGIPPGSDNFMGASSPFNLWRESFISLWPQKTGNV 307 Query: 323 ----KETTDPAKDPGFKELVIDEIRSQKNEELAGLMR 355 + DP DP FKE ID + K +EL +R Sbjct: 308 DVEDTKKQDPMIDPVFKEPSIDNLVEIKRKELENHIR 344 >gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 233 Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats. Identities = 66/173 (38%), Positives = 92/173 (53%), Gaps = 12/173 (6%) Query: 192 KDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLA 251 KD E +DP P P++I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L Sbjct: 51 KDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLL 110 Query: 252 KVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QSVERIGATFG 309 K+ R I L FG +S VD N+PL I G DS +IG + ++ A Sbjct: 111 KI-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSP 167 Query: 310 MEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMR 355 ME+ + +K LK DPA+DP + E +DE+R QK++EL R Sbjct: 168 MELWKKVYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKR 220 >gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermediate chain [Tetrahymena thermophila] Length = 474 Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 90/340 (26%), Positives = 162/340 (47%), Gaps = 42/340 (12%) Query: 42 EQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR--PTLALEYSFGRRI 99 E+ L+Q A E+T++V+G K GKTT +N + ++ R PT+ L+Y + RR Sbjct: 30 EESELKQGFAKNL--EKTLVVIGDKGSGKTTFVNILKNMQQVDDRYIPTVGLDYQYVRRT 87 Query: 100 GSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKG 159 + + ++++ +ELG +++ +P+ + IL+LDLS+P + ++ Sbjct: 88 NANRK-ELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLDLSKPHQIIESATFWFEE 146 Query: 160 LRDTAQQ--MMEKVTPELREILEQRTVERVGQQNK-----DSEKLDPLPFPVIIVGGKYD 212 +R Q + TPE + QR+ QQ + D ++ LP I++G KYD Sbjct: 147 IRRQIDQFNLTAFTTPEEND---QRSNFEFAQQARFESHPDKNRVKILPIQTIVIGMKYD 203 Query: 213 VFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP-AHPFR 271 +F D RK R LR +AH+ G +L F S K L + +R + + FG A ++ Sbjct: 204 LFEKTDSENRKWLTRTLRYLAHVNGASLYFASSKNNDLFQNVRSIMNNALFGKTLAQYYQ 263 Query: 272 SHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKET------ 325 S + P+ I D +K+G + +I + L+ K+ ++ET Sbjct: 264 SEHL---RPIEISLSKDELAKMG------LPQISGN----MTYLEAFKKVIQETFPENKG 310 Query: 326 --TDPAKDP-----GFKELVIDEIRSQKNEELAGLMRDVL 358 D ++DP F E ID IR++K++E+ + ++ + Sbjct: 311 AQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKEFM 350 >gi|115690607|ref|XP_001202918.1| PREDICTED: similar to Dynein, cytoplasmic 2, light intermediate chain 1, partial [Strongylocentrotus purpuratus] gi|115733494|ref|XP_788980.2| PREDICTED: similar to Dynein, cytoplasmic 2, light intermediate chain 1, partial [Strongylocentrotus purpuratus] Length = 170 Score = 95.9 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 7/164 (4%) Query: 31 SIQDIAGRLAEEQQRLRQLEATTTPK--ERTILVLGSKCVGKTTAINKFFDREEHATRPT 88 SI DIA AE++ E K E IL +GSK GKT+ I +F ++EE A +PT Sbjct: 4 SIWDIAILEAEQKHATESKEQGGEAKGSENHILFIGSKNAGKTSIILRFLEKEE-APKPT 62 Query: 89 LALEYSFGRRI-GSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQ 147 +ALEY+FGRR G + ++WELG QL E+P+ + ++++++DLSQP Sbjct: 63 IALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDLSQPY 122 Query: 148 RFWTDLECAYKGLRDTAQQMMEKVT---PELREILEQRTVERVG 188 W +E KG D +Q++ K P++++ +++R +R+G Sbjct: 123 ELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIG 166 >gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 3 [Canis familiaris] Length = 225 Score = 95.9 bits (237), Expect = 4e-18, Method: Composition-based stats. Identities = 65/186 (34%), Positives = 96/186 (51%), Gaps = 12/186 (6%) Query: 179 LEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGG 238 + Q+ + + + D E +DP P++I+G KYD+F FD RK C+ LR +AH G Sbjct: 30 MRQKIWSNMQKDHPDRELVDPFLIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGA 89 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA 298 +L+F S+ L KV R I L FG +S VD N+PL I G DS S+IG Sbjct: 90 SLMFTSKSEALLLKV-RGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSLSQIGSPPI 146 Query: 299 --QSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEE 349 + ++ A M++ + E+ LK DPA+DP + E +DE+R QK++E Sbjct: 147 PDNDIGKLHAHSPMDLWKKVYERVFPPKSTNTLKHIKDPARDPQYAEGEVDEMRIQKDQE 206 Query: 350 LAGLMR 355 L R Sbjct: 207 LEQYKR 212 >gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] gi|89300006|gb|EAR97994.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] Length = 487 Score = 88.2 bits (217), Expect = 8e-16, Method: Composition-based stats. Identities = 88/353 (24%), Positives = 164/353 (46%), Gaps = 55/353 (15%) Query: 42 EQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR--PTLALEYSFGRRI 99 E+ L+Q A E+T++V+G K GKTT +N + ++ R PT+ L+Y + RR Sbjct: 30 EESELKQGFAKNL--EKTLVVIGDKGSGKTTFVNILKNMQQVDDRYIPTVGLDYQYVRRT 87 Query: 100 GSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKG 159 + + ++++ +ELG +++ +P+ + IL+LDLS+P + ++ Sbjct: 88 NANRK-ELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLDLSKPHQIIESATFWFEE 146 Query: 160 LRDTAQQ--MMEKVTPELREILEQRTVERVGQQNK-----DSEKLDPLPFPVIIVGGKYD 212 +R Q + TPE + QR+ QQ + D ++ LP I++G KYD Sbjct: 147 IRRQIDQFNLTAFTTPEEND---QRSNFEFAQQARFESHPDKNRVKILPIQTIVIGMKYD 203 Query: 213 VFSGFDPIIRKHTCRCLRSMAHLIGGALLF-------------YSQKMPKLAKVLRDTIC 259 +F D RK R LR +AH+ G +L F ++++ L + +R + Sbjct: 204 LFEKTDSENRKWLTRTLRYLAHVNGASLYFASSNTQIHVLFNQHNKRNNDLFQNVRSIMN 263 Query: 260 HLGFGSP-AHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLE 318 + FG A ++S + P+ I D +K+G + +I + L+ Sbjct: 264 NALFGKTLAQYYQSEHL---RPIEISLSKDELAKMG------LPQISGN----MTYLEAF 310 Query: 319 KQKLKET--------TDPAKDP-----GFKELVIDEIRSQKNEELAGLMRDVL 358 K+ ++ET D ++DP F E ID IR++K++E+ + ++ + Sbjct: 311 KKVIQETFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKEFM 363 >gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70877049|gb|EAN90434.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 422 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 89/357 (24%), Positives = 143/357 (40%), Gaps = 57/357 (15%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT----------RPTLALEYSF 95 L E T E +L++G+ GKT+ + + F ++ +PT AL+YSF Sbjct: 67 LNTRENQVTQTEVNVLIVGTSGGGKTSLLRRIFSGVNTSSSSVPKSFLRVKPTTALDYSF 126 Query: 96 GRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC 155 RR QV + WEL QL EV + + + + +++D S+P W Sbjct: 127 VRR-NDRHIAQVAHFWELAQGMELSQLCEVVITPENVHTMVLAIVVDCSEPSTMW----- 180 Query: 156 AYKGLRDTAQQMMEKVTPELREILEQ--------------RTVERVGQQNKDSEKLDPLP 201 DT M++V + EI ++ R VG ++ D +L Sbjct: 181 ------DTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVGMEHPDLNRLRLSG 234 Query: 202 FPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHL 261 P +I+ K D F+G + + K R +R +AH+ G L+F S A LR + HL Sbjct: 235 VPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAE---AIKLRAVMNHL 290 Query: 262 GFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGD-----------TGAQSVERIGATFGM 310 F S + + + D+++ IG+ TG ++R A Sbjct: 291 VFVSTFDLKHIELDPERGAVLVIPSADTFADIGEPAVSDMGGLQSTGDAELDRWKAPLDA 350 Query: 311 EVPQLQLEKQK-----LKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 P Q E + LK D ++ GF E +D +R QK +EL + R K Sbjct: 351 MFPAKQSEGRMQNDSFLKRLYDTGEN-GFGEPTVDAVRKQKEDELEQYRKSAFKREK 406 >gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] Length = 201 Score = 78.2 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 69/116 (59%), Gaps = 2/116 (1%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+ + +GSK GKTT I + DR+E ++PTLALEY++GRR +P+ + + WELG Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDE-PSKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + L+ +P+ L+ +++L+LDLS+P W +E + + +++ K+ Sbjct: 90 GTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKL 145 >gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain isoform 2 [Homo sapiens] gi|16740931|gb|AAH16324.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|119620695|gb|EAX00290.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_b [Homo sapiens] Length = 201 Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 2/116 (1%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+ + +GSK GKTT I + DR+E +PTLALEY++GRR +P+ + + WELG Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + L+ +P+ L+ +++L+LDLS+P W +E + + +++ K+ Sbjct: 90 GTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKL 145 >gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70865007|gb|EAN81375.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 286 Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 58/223 (26%), Positives = 95/223 (42%), Gaps = 37/223 (16%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT----------RPTLALEYSF 95 L E T E +L++G+ GKT+ + + F ++ +PT AL+YSF Sbjct: 67 LNTRENQVTQTEVNVLIVGTSGSGKTSLLRRIFSGVNTSSSSVPKSFLRVKPTTALDYSF 126 Query: 96 GRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC 155 RR QV + WEL QL EV + + + + +++D S+P W Sbjct: 127 VRR-NDRHIAQVAHFWELAQGMELSQLCEVVITPENVHTMVLAIVVDCSEPSTMW----- 180 Query: 156 AYKGLRDTAQQMMEKVTPELREILEQ--------------RTVERVGQQNKDSEKLDPLP 201 DT M++V + EI ++ R VG ++ D +L Sbjct: 181 ------DTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVGMEHPDLNRLRLSG 234 Query: 202 FPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYS 244 P +I+ K D F+G + + K R +R +AH+ G L+F S Sbjct: 235 VPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTS 276 >gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Trypanosoma brucei TREU927] gi|70835124|gb|EAN80626.1| dynein light intermediate chain, putative [Trypanosoma brucei] Length = 418 Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 51/345 (14%) Query: 57 ERTILVLGSKCVGKTTAINKFFD----------REEHATRPTLALEYSFGRRIGSGKSPQ 106 E + V+G GKT+ I + + + +PT AL+Y + R S Q Sbjct: 83 EANLFVVGCSGAGKTSVIQRVCSAIGAGGNTSGKGKTKVKPTTALDYQYTTRSDRHVS-Q 141 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 ++ WEL QL EV + + + + +++D S P W L K + A + Sbjct: 142 TVHFWELAQGMELSQLCEVVITPENVHLMHIAIVVDFSDPSSMWDTLAYWLKRVDRRANE 201 Query: 167 MMEKV------TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI 220 +++K+ TP+ L R +G+ + D +++ P +IV K D F G P+ Sbjct: 202 ILQKMRAKGSNTPDK---LHARAQRALGEGHPDLKRVRLSGLPTVIVCNKVDAFPG--PM 256 Query: 221 IRKHT-CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFN- 278 + T RCLR +AHL G L+F S ++L + PF + V+ + Sbjct: 257 EQMKTLTRCLRFIAHLYGAYLVFSSDADSAKLRLLLNH------LLFLTPFDARQVELDV 310 Query: 279 --EPLCIWFGTDSWSKIGD---------------TGAQSVER----IGATFGMEVPQLQL 317 + I D++ IGD TG ++R + A F + + Sbjct: 311 ERGTILIMPENDTFVDIGDPPLCDGPSGGPVTQSTGDSELDRWKVPLDAMFPPKAGGGRA 370 Query: 318 EKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + + + + GF E ID IR QK+EEL + R K Sbjct: 371 QSDAMLKRLYDMGEGGFGEPTIDTIRRQKDEELEQYRKSAARRDK 415 >gi|146097038|ref|XP_001468017.1| dynein light intermediate chain [Leishmania infantum JPCM5] gi|134072383|emb|CAM71091.1| dynein light intermediate chain, putative [Leishmania infantum] Length = 424 Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 85/334 (25%), Positives = 147/334 (44%), Gaps = 42/334 (12%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFDREEHA--------TRPTLALEYSFGRRIGS 101 +A E +++++G+ GKTT +++ + + + + T AL+YSF RR Sbjct: 83 DANVEQTETSLVMVGASGSGKTTLLHRIYTSFQSSSSGSGPKRVKATTALDYSFARRSER 142 Query: 102 GKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR 161 +P V + WE+ QLL++ + + +A +++D S+ + E A LR Sbjct: 143 NVAP-VAHFWEIAQGTQFSQLLDIVLTPENVHAVAAAVVVDASE-EGLPVSWETATYWLR 200 Query: 162 -------DTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVF 214 D +Q+M K + +IL R + +G + D +++ P ++V K D F Sbjct: 201 RLDQRVSDISQRMKAKGSTTPAKIL-TRAQKAIGLDHPDLKRMRLSGIPTVLVVNKIDAF 259 Query: 215 SGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 G D K CR +R +AHL G ++F S++ + L + F +P P Sbjct: 260 RG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQESVRWRALMNFTL---FQAPFDPKYLQT 315 Query: 275 VDFNEPLCIWFGTDSWSKIGD-----------TGAQSVERIGATFGMEVPQLQLEKQKLK 323 + + DS+ IGD TG ++R A F P +L + K+ Sbjct: 316 DPERSAVLLTVDRDSFLDIGDPDVSRLGGSVSTGDAELDRWKAPFDEAFPPKKLNEDKVM 375 Query: 324 ETTDP-------AKDPGFKELVIDEIRSQKNEEL 350 + DP + GF + VID +R QK+EEL Sbjct: 376 D--DPFIRRLYDTAEGGFGDPVIDALRKQKDEEL 407 >gi|157874331|ref|XP_001685649.1| dynein light intermediate chain, putative [Leishmania major] gi|68128721|emb|CAJ08854.1| dynein light intermediate chain, putative [Leishmania major] Length = 425 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 84/334 (25%), Positives = 144/334 (43%), Gaps = 41/334 (12%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT--------RPTLALEYSFGRRIGS 101 +A E +++V+G+ GKTT +++ + + + + T AL+YSF RR Sbjct: 83 DANVEQTETSLVVVGASGSGKTTLLHRIYTSFQSNSSGSGPKRVKATTALDYSFARRSER 142 Query: 102 GKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR 161 +P V + WE+ QLL++ + + + +++D S+ + E A LR Sbjct: 143 NVAP-VAHFWEIAQGTQFSQLLDIVVTPENVHAVVAAVVVDASE-EGLPVAWETATYWLR 200 Query: 162 -------DTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVF 214 D +Q+M K + +IL R + +G + D +++ P ++V K D F Sbjct: 201 RLDQRVSDISQRMKAKGSTTPAKIL-TRAQKAIGLDHPDLKRMRLSGVPTVLVINKIDAF 259 Query: 215 SGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 D K CR +R +AHL G ++F S++ + L + F +P P Sbjct: 260 RR-DMQQLKFLCRSMRYLAHLYGAHVVFTSEQESVRWRALMNFTL---FQAPFDPKYLQT 315 Query: 275 VDFNEPLCIWFGTDSWSKIGD-----------TGAQSVERIGATFGMEVPQLQLEKQKLK 323 + + DS+ IGD TG ++R A F P +L ++ K Sbjct: 316 DPERSAVLLTVDRDSFLDIGDPDVSRLGGSASTGDAELDRWKAPFDEAFPPKKLNEEG-K 374 Query: 324 ETTDP-------AKDPGFKELVIDEIRSQKNEEL 350 DP + GF + VID +R QK+EEL Sbjct: 375 VVDDPFIRRLYDTSEGGFGDPVIDALRKQKDEEL 408 >gi|158599820|gb|EDP37275.1| hypothetical protein Bm1_12090 [Brugia malayi] Length = 116 Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 12/99 (12%) Query: 42 EQQRLRQLEATTT----------PKERTILVLGSKCVGKTTAINKFFDREEHATRPTLAL 91 E++ +RQ +A + + +++ GS+ GKT+ I +F +R E T+PT+AL Sbjct: 17 EKRTVRQQDAINSYINLIGSDLQTSDTRLIICGSRNCGKTSMIFRFLNRNED-TKPTIAL 75 Query: 92 EYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTH 130 EY++GRR GK V N+WELG N LL++P+ ++ Sbjct: 76 EYTYGRR-NRGKMKDVGNIWELGGGTNLCNLLQIPLSSN 113 >gi|123423641|ref|XP_001306418.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121887991|gb|EAX93488.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 286 Score = 64.7 bits (156), Expect = 8e-09, Method: Composition-based stats. Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 46/293 (15%) Query: 60 ILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNA 119 +L +G + GK++ IN+FF R + +T PTLAL Y +GK +V++ WELG Sbjct: 32 VLFVGGEQSGKSSLINQFFGRGD-STYPTLALAYQCCNLKVNGKE-KVLHFWELGGGVQM 89 Query: 120 EQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL 179 E L+ + V + DLS+ + ++E + E +IL Sbjct: 90 ESLIPTIATEDTISGFVVFVCFDLSK------------------SASIIESL--EWLDIL 129 Query: 180 EQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA--HLIG 237 + R ++ QN + + G YD+F P ++ + LRS+A H +G Sbjct: 130 QMRLKDK---QNA-----------IFLAGTHYDLFESKSPQDKEIIVQGLRSIAAEHKVG 175 Query: 238 GALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG 297 L+F S KM L ++ I ++ + R VDF P+ + G D+ + T Sbjct: 176 --LVFTSSKMETLINRFKNVIKYVCIANSN--VREKSVDFFNPVIVGPGADTELQ---TS 228 Query: 298 AQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEEL 350 Q V + E+ + +K + DPG E ID + K EL Sbjct: 229 GQEVADMMNKLSAEIAIEKRDKSS-NSLKNVITDPGLAEEDIDSLYLAKKAEL 280 >gi|154343515|ref|XP_001567703.1| dynein light intermediate chain, putative [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065035|emb|CAM43147.1| dynein light intermediate chain, putative [Leishmania braziliensis] Length = 428 Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 85/339 (25%), Positives = 142/339 (41%), Gaps = 48/339 (14%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT--------RPTLALEYSFGRRIGS 101 +A E ++V+G+ GKTT +++ + + + + T AL+YSF RR Sbjct: 83 DAAVEQTEINLVVVGAPGSGKTTLLHRIYTSFQSSASGSCSKRVKATTALDYSFARRSER 142 Query: 102 GKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR 161 +P V + WE+ QLL+V + + + +++D S+ + E A +R Sbjct: 143 NVAP-VAHFWEIAQGMQFSQLLDVVVTPENVHAIVAAVVVDASE-EGLPVAWEAATYWMR 200 Query: 162 -------DTAQQMMEK--VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYD 212 D +Q+M K TPE L R + VG ++ D +++ P ++V K D Sbjct: 201 RIDQRVSDISQRMKAKGSTTPEK---LLTRAQKAVGLEHPDLKRMRLSGVPTVLVVNKID 257 Query: 213 VFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRS 272 F G D K CR +R +AHL G ++F S++ + L + F +P P Sbjct: 258 AFRG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQESVRWRALMNFTL---FQAPFDPKHL 313 Query: 273 HVVDFNEPLCIWFGTDSWSKIGDTGAQ--------------SVERIGATFGMEVPQLQLE 318 + + DS+ IGD ++R F P +L Sbjct: 314 QTDPERGAVLLTADRDSFLDIGDPNMSRLGGGGSSASTGDAELDRWKVPFDDAFPPKKLN 373 Query: 319 KQKLKETTDP-------AKDPGFKELVIDEIRSQKNEEL 350 ++ K DP + GF E +ID +R QK+EEL Sbjct: 374 EED-KVMDDPFIRRLYDTSEGGFGEPMIDTLRKQKDEEL 411 >gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] gi|31376209|gb|AAO12154.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|33334344|gb|AAQ12259.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|47680185|gb|AAT37069.1| dynein 1b light intermediate chain [Chlamydomonas reinhardtii] gi|158276532|gb|EDP02304.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] Length = 427 Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats. Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 16/195 (8%) Query: 63 LGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGS--GKSPQVMNVWELG-SLDN 118 +GS+ GK+T +N+F + +P+ +EY++ R+ + + + ++WE+G S + Sbjct: 46 VGSRAAGKSTLLNRFLYPTRAEVPKPSEGIEYTYARKPAAFDHEKKDLAHIWEVGGSQEF 105 Query: 119 AEQLL---EVPMRTHGLQQLAVILMLDLSQPQ------RFWTDLECAYKGLRDTAQQMME 169 AE+++ ++ + + V++++DLS P +W +E K L T ++ E Sbjct: 106 AEEIVNSDQLFLTAKQVTTAVVVIVVDLSDPAGVLPTLLYW--VEQVKKKLGSTYEKF-E 162 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 K +L E L QR ++ N+D + + ++I KYD F DP ++K R L Sbjct: 163 KKGLQLPEQLRQRAKSKLYSANEDKDTVYHSGISLVIAATKYDAFKNQDPEVKKVMSRVL 222 Query: 230 RSMAHLIGGALLFYS 244 R +AH G L + S Sbjct: 223 RYIAHAHGAFLCYLS 237 >gi|26252194|gb|AAH40558.1| DYNC2LI1 protein [Homo sapiens] Length = 144 Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 6/95 (6%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+ + +GSK GKTT I + DR+E +PTLALEY++GRR +P+ + + WELG Sbjct: 31 EKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 89 Query: 116 LDNAEQLLEVPMRTHGLQ--QLAVIL--MLDLSQP 146 + L+ +P+ L+ QL+ +L ++L+ P Sbjct: 90 GTSLLDLISIPITGDTLRSWQLSSLLPVSMNLTTP 124 >gi|57092883|ref|XP_531798.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 2 isoform 1 [Canis familiaris] Length = 107 Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGS 115 E+++ +GSK GKTT I + DR+E +PTLALEY++GRR P+ + + WELG Sbjct: 28 EKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNIPKDIAHFWELGG 86 Query: 116 LDNAEQLLEVPMRTHGLQQL 135 + L+ +P+ + L+ + Sbjct: 87 GTSLLDLISIPITSDNLRTV 106 >gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT00009430001 [Paramecium tetraurelia strain d4-2] gi|124407696|emb|CAK73082.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 4/130 (3%) Query: 120 EQLLEVPMRTHGLQQLAVILMLDLS-QPQRFWTDLECAYKGLRD-TAQQMMEKVTPELRE 177 +QLL +P+ QQ + +L++DLS P + +R+ T +++ + + + + Sbjct: 79 KQLLTLPLNKQSYQQYSYVLVIDLSDNPHEILNVCNAEIRYIREETEKKLQQSIDVDTFK 138 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFS-GFDPIIRKHTCRCLRSMAHLI 236 LE +++ + D ++ PL P+IIVG KYD+FS D RK R LR +AH Sbjct: 139 QLELNIYDKI-MMHHDKNRIVPLYVPIIIVGWKYDLFSKNLDLESRKWITRGLRYLAHTN 197 Query: 237 GGALLFYSQK 246 +L+F S + Sbjct: 198 NCSLVFGSNQ 207 >gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT00019900001 [Paramecium tetraurelia strain d4-2] gi|124421326|emb|CAK86207.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 4/136 (2%) Query: 120 EQLLEVPMRTHGLQQLAVILMLDLS-QPQRFWTDLECAYKGLRD-TAQQMMEKVTPELRE 177 +QLL +P+ QQ + IL++DLS P + +++ T +++ + + + + Sbjct: 79 KQLLTLPLNKQSYQQYSYILVIDLSDNPHEILNVCNTEIRYIKEETEKKLQQSIDVDTFK 138 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFS-GFDPIIRKHTCRCLRSMAHLI 236 LE +++ + D ++ P P+IIVG KYD+FS D RK R LR +AH Sbjct: 139 QLELNIYDKI-MMHHDKNRIIPSYVPIIIVGWKYDLFSKNLDQESRKWITRGLRYLAHSN 197 Query: 237 GGALLFYSQKMPKLAK 252 +L+F S + +L K Sbjct: 198 NCSLVFGSNQDYQLVK 213 >gi|123415018|ref|XP_001304608.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121886072|gb|EAX91678.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 287 Score = 51.6 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 39/232 (16%) Query: 33 QDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALE 92 +DI G L E+ + + +E+ L +GS+ GK+ N+FF R + TLAL Sbjct: 7 RDIWGALINEKASSLK---SGVNEEKHFLFVGSEKSGKSCLQNQFFSRRDEPPE-TLALS 62 Query: 93 YSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTD 152 Y + V++ WE+GS +QL+ + L+ + ++++P T Sbjct: 63 YQ-SASVRQDDKEVVLHFWEIGSGTKLDQLINTIVTKETLKDFNAFICFNVNKPSSILTA 121 Query: 153 LECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYD 212 + D A+ ++ K + + I +G YD Sbjct: 122 I--------DWAENLISKFAYKSQSIY--------------------------FIGTFYD 147 Query: 213 VFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 F DP + +T + LR++A L+F S K LA + I L G Sbjct: 148 TFESNDPSQKINTVQGLRAIASKYHAGLIFTSYKDDNLANRFKGLIRQLALG 199 >gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 134 Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 11/122 (9%) Query: 243 YSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QS 300 ++ K L +R I L FG +S VD N+PL I G DS +IG Sbjct: 2 FTSKSEALLLKMRGVINQLAFGIDKS--KSMCVDQNKPLFITAGLDSLCQIGSPPVPDSD 59 Query: 301 VERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGL 353 + ++ A ME+ + EK LK DPA+DP + E +DE+R QK++EL Sbjct: 60 IGKLQAHSPMELWKKVYEKLFPPKSTSTLKAIQDPARDPQYAESEVDEMRVQKDQELEQY 119 Query: 354 MR 355 R Sbjct: 120 KR 121 >gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 374 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 109/276 (39%), Gaps = 55/276 (19%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 PS + L+E R R + P +TILVLG GKTT + K EH + Sbjct: 58 PSGPSTSSILSEVSTRSR----SKLPSGKTILVLGDNGSGKTTLMAKL-QGAEHGQKGR- 111 Query: 90 ALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 LEY + + NVW L ++ LL+ + LQ VI ++D+S+P Sbjct: 112 GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRP-- 169 Query: 149 FWTDLECAYKG---LR----------DTAQQMMEKVTPELREILE---------QRTVER 186 WT +E K LR + + M +K+ E +E +E QR Sbjct: 170 -WTAMESLEKWAGVLREHIDKLKIPPEETRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPS 228 Query: 187 VGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFDP----------IIRKHTCR-C 228 GQ+N ++ L PV++V K D S + I+ H R C Sbjct: 229 SGQENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFC 288 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 L+ G AL++ S K K +L + H +G Sbjct: 289 LQ-----YGAALIYTSVKGEKNLDLLYKYLVHKMYG 319 >gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein, partial [Gallus gallus] Length = 388 Score = 44.3 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 103/264 (39%), Gaps = 49/264 (18%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P +TILVLG GKTT + K EH + LEY + Sbjct: 4 LSEVSTRSR----SKLPSGKTILVLGDNGSGKTTLMAKL-QGAEHGQKGR-GLEYLYLNV 57 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + NVW L ++ LL+ + LQ VI ++D+S+P LE Sbjct: 58 HDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWTVMESLEKWA 117 Query: 158 KGLRDTAQQ----------MMEKVTPELREILE---------QRTVERVGQQNK------ 192 LR+ + M +K+ E +E +E QR GQ+N Sbjct: 118 GVLREHIDKLKIPPEEMRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQENASVSLSL 177 Query: 193 -DSEKLDPLPFPVIIVGGKYDVFSGFDP----------IIRKHTCR-CLRSMAHLIGGAL 240 ++ L PV++V K D S + I+ H R CL+ G AL Sbjct: 178 GENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQ-----YGAAL 232 Query: 241 LFYSQKMPKLAKVLRDTICHLGFG 264 ++ S K K +L + H +G Sbjct: 233 IYTSVKGEKNLDLLYKYLVHKMYG 256 >gi|157128066|ref|XP_001661298.1| dynein light intermediate chain [Aedes aegypti] gi|108872707|gb|EAT36932.1| dynein light intermediate chain [Aedes aegypti] Length = 494 Score = 43.1 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 79/188 (42%), Gaps = 18/188 (9%) Query: 21 RTEGGESATPSIQDI-------AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTA 73 + G + TP +DI + L+E Q + +T P +++LVLG GKTT Sbjct: 11 QVNGITATTPRKKDIDPKENLWSAILSEVQTQ----SSTKLPSNKSVLVLGDNASGKTTL 66 Query: 74 INKFFDREEHATRPTLALEYSF-GRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGL 132 I K E+ + LEY++ R + VW L LL+ + Sbjct: 67 IAKLQGVED--PKKGSGLEYAYIDVRDEYRDDVTRLGVWILDGDPGHTNLLKYALNETNY 124 Query: 133 QQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK 192 VIL L ++ P + LE K L D + K+ PE R+ QR V V Q Sbjct: 125 AHTLVILTLSMTTPWSWVDQLEHWIKMLDDHIAGL--KIDPEERQQCRQRLVT-VWQSYC 181 Query: 193 DS-EKLDP 199 D+ ++LDP Sbjct: 182 DTIDELDP 189 >gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin light chain A [Monodelphis domestica] Length = 520 Score = 42.0 bits (97), Expect = 0.061, Method: Composition-based stats. Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 10/148 (6%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + +L+LG GKT+ I + R E + A EY + Sbjct: 48 LSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGRIQGRPEECKKGRGA-EYLYLSV 102 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + Q NVW L + LL+ M + L+ VIL++D+S+P WT L+ Sbjct: 103 HDEDRDDQTRCNVWILDGDLYHKGLLKFAMEANSLRDTLVILVVDMSKP---WTALDSLQ 159 Query: 158 KGLRDTAQQMME-KVTPELREILEQRTV 184 K + + + K+ PE + +EQ+ + Sbjct: 160 KWASVVREHIDKLKIPPEEMKEMEQKLI 187 >gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella vectensis] gi|156225136|gb|EDO45956.1| predicted protein [Nematostella vectensis] Length = 422 Score = 42.0 bits (97), Expect = 0.072, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 51/279 (18%) Query: 55 PKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWEL 113 P ++I+++G+ GKTT I+K +E+ ++ LEY++ +NVW L Sbjct: 16 PSHKSIILIGNDESGKTTLISKLRGKEDDISKGH-GLEYTYLEVHDEEIDDYTRLNVWIL 74 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 + LL+ + + + V++++D S+P L + LR+ + K++P Sbjct: 75 DGDPRNKSLLKYALTPKHARDVLVVMVVDCSRPWAIMESLHSWTEILREHIHSL--KLSP 132 Query: 174 ELREILEQRTVE-----------------RVGQQNKDSEKL--------DPLPFPVIIVG 208 + +E++ V+ R G +++D L D L P+I++ Sbjct: 133 KELNEMEEKIVQQFQDYTDTEEASDENRRRSGTKDEDKVVLPLEENVLVDNLGIPMIVLV 192 Query: 209 GKYDVFSGFDP----------IIRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDT 257 K D + I++H R CL+ G AL + S K K + Sbjct: 193 TKTDCMLSLEKDRDFHDEHFDFIQQHIRRYCLKH-----GAALFYTSVKENKNCNLFLKY 247 Query: 258 ICHLGFGSPAHPFRSH--VVDFNEPLCIWFGTDSWSKIG 294 + H +G PF+S VVD + + I G DS KIG Sbjct: 248 VLHKIYGL---PFKSPALVVD-KDSVFIPSGWDSMKKIG 282 >gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] Length = 335 Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 56/270 (20%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + +L+LG GKT+ I K EE+ + LEY + Sbjct: 27 LSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEY--KKGRGLEYLYLNV 80 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + Q NVW L + LL+ + L+ V+L++D+S+P WT L+ Sbjct: 81 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP---WTALDSLQ 137 Query: 158 KG---LRDTAQQMMEKVTPELREILEQRTVE--------------------RVGQQNKDS 194 K +R+ ++ K+ PE + +EQ+ + Q++KD Sbjct: 138 KWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDD 195 Query: 195 EKLDP---------LPFPVIIVGGKYDVFSGFDPIIRKHTCR---------CLRSMAHLI 236 + P L PV++V K D S + ++H R +R Sbjct: 196 SVVLPLGADTLTHNLGIPVLVVCTKCDAISVLE---KEHDYRDEHFDFIQSHIRKFCLQY 252 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 G AL++ S K K ++ I +G P Sbjct: 253 GAALIYTSVKENKNIDLVYKYIVQKLYGFP 282 >gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974436|ref|XP_001184479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 483 Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 5/133 (3%) Query: 55 PKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF-GRRIGSGKSPQVMNVWEL 113 P ++ILVLG GKTT +++ E+ + LEY + R VW L Sbjct: 43 PSCKSILVLGEDETGKTTLLSRLQGVED--PKKGYGLEYLYLDVRDEDRDDTTRCGVWIL 100 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 + E LL + L+ + VI+ +D+ +P L+ + +R + ++ P Sbjct: 101 AGENEHEDLLRYALTADNLEHMLVIIAVDMCRPWNIMDSLQKWTQVIRRHVDSL--RIPP 158 Query: 174 ELREILEQRTVER 186 E LEQR V++ Sbjct: 159 EKLRELEQRLVQQ 171 >gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 [Bos taurus] gi|86438315|gb|AAI12622.1| Similar to Dynein light intermediate chain 1, cytosolic (Dynein light chain A) (DLC-A) [Bos taurus] Length = 524 Score = 40.8 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 105/268 (39%), Gaps = 52/268 (19%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + +L+LG GKT+ I K EE+ + LEY + Sbjct: 53 LSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEY--KKGRGLEYLYLNV 106 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + Q NVW L + LL+ + L+ V+L++D+S+P WT L+ Sbjct: 107 HDEDRDDQTRCNVWILDGDPYHKGLLKFSLDAISLKDTLVMLVVDMSKP---WTALDSLQ 163 Query: 158 KGLRDTAQQMME-KVTPELREILEQRTVE--------------------RVGQQNKDSEK 196 K + + + K+ PE + +EQ+ V Q+++D Sbjct: 164 KWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQRRSTASQEDRDDSV 223 Query: 197 LDP---------LPFPVIIVGGKYDVFSGFDPIIRKHTCR---------CLRSMAHLIGG 238 L P L PV++V K D S + ++H R +R G Sbjct: 224 LLPLGADTLTQNLGVPVLVVCTKCDAISVLE---KEHDYRDEHFDFIQSHIRKFCLQYGA 280 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSP 266 AL++ S K K ++ I +G P Sbjct: 281 ALIYASVKENKNIDLVYKYIVQKLYGFP 308 >gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT00031450001 [Paramecium tetraurelia strain d4-2] gi|124395704|emb|CAK61219.1| unnamed protein product [Paramecium tetraurelia] Length = 435 Score = 40.8 bits (94), Expect = 0.14, Method: Composition-based stats. Identities = 70/299 (23%), Positives = 121/299 (40%), Gaps = 29/299 (9%) Query: 58 RTILVLGSKCVGKTTAINKFFD---REEHATRP---TLALEYSFGRRIGSGKSPQV---- 107 + +++LG KC GK + ++ + ++A R T ++Y+F I + P Sbjct: 24 KNLVILGRKCSGKRSLLDSLAEITKTHKNAIRQKGITPIVDYAFLNLIDL-RDPDYNTNA 82 Query: 108 -MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 +NV+ L + + LL + ++ V++ LD+ +P F DL+ L+D Sbjct: 83 RLNVYILEE-EGQKYLLPQILNHKNIKNTFVVIALDMQEPWTFMEDLDRWISVLQD---- 137 Query: 167 MMEKVTPELREILE------QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFS----G 216 MM + L E+ E Q + G Q + L P++++ K D+ G Sbjct: 138 MMADLRLSLNELEEMKANVMQYMSQMDGGQAHEGLLKTNLGIPLMVMVNKSDILERDDKG 197 Query: 217 FDPIIRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVV 275 D + + CLR G LLF S K KV+ + + H + P + + Sbjct: 198 KDWDQKAEIIQFCLRQFCVNYGATLLFTSVKQKINIKVMYEYVLHRLYNMPFETSQHKNL 257 Query: 276 DFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGF 334 E L I G D + I T + + + VP +QL+K +KE D F Sbjct: 258 SDFESLFIPLGQDDINIIKSTFTKLANGV-IKYEESVPVVQLKKNLVKEELTVEDDQEF 315 >gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] gi|5531813|gb|AAD44481.1| dynein light chain-A [Homo sapiens] Length = 523 Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 68/275 (24%), Positives = 107/275 (38%), Gaps = 66/275 (24%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + +L+LG GKT+ I K EE+ + LEY + Sbjct: 53 LSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEY--KKGRGLEYLYLNV 106 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + Q NVW L + LL+ + L+ V+L++D+S+P WT L+ Sbjct: 107 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP---WTALDSLQ 163 Query: 158 KG---LRDTAQQMMEKVTPELREILEQRTVE--------------------RVGQQNKDS 194 K +R+ ++ K+ PE + +EQ+ + Q++KD Sbjct: 164 KWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDD 221 Query: 195 EKLDP---------LPFPVIIVGGKYDV--------------FSGFDPIIRKHTCRCLRS 231 + P L PV++V K D F F IRK CLR Sbjct: 222 SVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKF---CLR- 277 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 G AL++ S K K ++ I +G P Sbjct: 278 ----YGAALIYTSVKENKNIDLVYKYIVQKLYGFP 308 >gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 40.4 bits (93), Expect = 0.18, Method: Composition-based stats. Identities = 66/272 (24%), Positives = 108/272 (39%), Gaps = 60/272 (22%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + +L+LG GKT+ I K EE+ + LEY + Sbjct: 53 LSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEY--KKGRGLEYLYLNV 106 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + Q NVW L + LL+ + L+ V+L++D+S+P WT L+ Sbjct: 107 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP---WTALDSLQ 163 Query: 158 KG---LRDTAQQMMEKVTPELREILEQRTVE--------------------RVGQQNKDS 194 K +R+ ++ K+ PE + +EQ+ + Q++KD Sbjct: 164 KWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDD 221 Query: 195 EKLDP---------LPFPVIIVGGKYDVFSGFDP----------IIRKHTCR-CLRSMAH 234 + P L PV++V K D S + I+ H + CLR Sbjct: 222 SVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLR---- 277 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 G AL++ S K K ++ I +G P Sbjct: 278 -YGAALIYTSVKENKNIDLVYKYIVQKLYGFP 308 >gi|123401357|ref|XP_001301845.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121883074|gb|EAX88915.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 179 Score = 40.0 bits (92), Expect = 0.26, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 14/106 (13%) Query: 60 ILVLGSKCVGKTTAINKFF--DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 +L++G + GKT +NK+ D T PT+ ++YS +RI SP ++ W+L D Sbjct: 17 VLLIGDQSTGKTCLLNKYLAPDSGLSKTTPTIGIDYS-SQRIDVDGSPTYIHYWDLSGND 75 Query: 118 NAEQLLEVPMRTHGLQQL-AVILMLDLSQPQRF-----WTDLECAY 157 L +R + IL+ DL+ Q F W D Y Sbjct: 76 -----LYTEVRNEFYPEANGFILVFDLTNRQSFDNLQKWIDEGVKY 116 >gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A isoform 2 [Pan troglodytes] gi|134047749|sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|119584837|gb|EAW64433.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_c [Homo sapiens] gi|124297735|gb|AAI31621.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] Length = 523 Score = 39.7 bits (91), Expect = 0.32, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 56/270 (20%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + +L+LG GKT+ I K EE+ + LEY + Sbjct: 53 LSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEY--KKGRGLEYLYLNV 106 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + Q NVW L + LL+ + L+ V+L++D+S+P WT L+ Sbjct: 107 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP---WTALDSLQ 163 Query: 158 KG---LRDTAQQMMEKVTPELREILEQRTVE--------------------RVGQQNKDS 194 K +R+ ++ K+ PE + +EQ+ + Q++KD Sbjct: 164 KWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDD 221 Query: 195 EKLDP---------LPFPVIIVGGKYDVFSGFDPIIRKHTCR---------CLRSMAHLI 236 + P L PV++V K D S + ++H R +R Sbjct: 222 SVVLPLGADTLTHNLGIPVLVVCTKCDAISVLE---KEHDYRDEHFDFIQSHIRKFCLQY 278 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 G AL++ S K K ++ I +G P Sbjct: 279 GAALIYTSVKENKNIDLVYKYIVQKLYGFP 308 >gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 39.7 bits (91), Expect = 0.34, Method: Composition-based stats. Identities = 64/270 (23%), Positives = 107/270 (39%), Gaps = 56/270 (20%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + +L+LG GKT+ I K EE+ + LEY + Sbjct: 53 LSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEY--KKGRGLEYLYLNV 106 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + Q NVW L + LL+ + L+ V+L++D+S+P WT L+ Sbjct: 107 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP---WTALDSLQ 163 Query: 158 KG---LRDTAQQMMEKVTPELREILEQRTVE--------------------RVGQQNKDS 194 K +R+ ++ K+ PE + +EQ+ + Q++KD Sbjct: 164 KWASVVREHVDKL--KIPPEEMKQIEQKLIRDFQEYVEPGEDFPASPQGRNTASQEDKDD 221 Query: 195 EKLDP---------LPFPVIIVGGKYDVFSGFDPIIRKHTCR---------CLRSMAHLI 236 + P L PV++V K D S + ++H R +R Sbjct: 222 SVVLPLGADTLTHNLGIPVLVVCTKCDAISVLE---KEHDYRDEHFDFIQSHIRKFCLQY 278 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 G AL++ S K K ++ I +G P Sbjct: 279 GAALIYTSVKENKNIDLVYKYIVQKLYGFP 308 >gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein light intermediate chain 2 [Monodelphis domestica] Length = 493 Score = 39.3 bits (90), Expect = 0.41, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 15/151 (9%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + ILV G GKTT + K EH+ + LEY + Sbjct: 40 LSEVSTRSR----SKLPSGKNILVFGEDGSGKTTLLAKL-QGAEHSKKGR-GLEYLYLNI 93 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + NVW L + LL+ + LQ+ VI + D+S+P WT +E Sbjct: 94 HDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAETLQETLVIFVADMSRP---WTVMESLQ 150 Query: 158 KG---LRDTAQQMMEKVTPELREILEQRTVE 185 K LR+ +M K+ PE +EQ+ V+ Sbjct: 151 KWASVLREHIDKM--KIPPEEMRDMEQKFVK 179 >gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light chain-A [Canis familiaris] Length = 524 Score = 39.3 bits (90), Expect = 0.45, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + +L+LG GKT+ I K EE+ + LEY + Sbjct: 53 LSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKIQGIEEY--KKGRGLEYLYLNV 106 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + Q NVW L + LL+ + L+ V+L++D+S+P WT L+ Sbjct: 107 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAISLKDTLVMLVVDMSKP---WTALDSLQ 163 Query: 158 KGLRDTAQQMME-KVTPELREILEQRTV 184 K + + + K+ PE + +EQ+ + Sbjct: 164 KWASVVREHIDKLKIPPEEMKEMEQKLI 191 >gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Gallus gallus] gi|53126839|emb|CAG30989.1| hypothetical protein [Gallus gallus] Length = 488 Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 104/268 (38%), Gaps = 57/268 (21%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + ILV G GKTT + K EH + LEY + Sbjct: 36 LSEVSTRSR----SKLPSGKNILVFGDDGSGKTTLMAKI-QGAEHGKKGR-GLEYLYLNI 89 Query: 99 IGSGKSPQVM-NVWEL-GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECA 156 + Q NVW L G L N + LL+ + LQ V+ + D+S+P WT +E Sbjct: 90 HDEDRDDQTRCNVWILDGDLYN-KGLLKFAVSAESLQDTIVVFVADMSRP---WTVMESL 145 Query: 157 YKGLR-------------DTAQQMMEKVTPELREILE-----QRTVERVGQQNKDSEKLD 198 K + + M +K E +E +E Q + +R G + ++ Sbjct: 146 QKWASVLQEHIDKLKIPPEEMRDMEQKFIKEFQEYVEPEEGYQGSPQRRGPSSGQEDESV 205 Query: 199 PLPF-----------PVIIVGGKYDVFSGFDP----------IIRKHTCR-CLRSMAHLI 236 LP PV++V K D S + I+ H R CL+ Sbjct: 206 SLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHIRRFCLQ-----Y 260 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFG 264 G AL++ S K K +L I H +G Sbjct: 261 GAALIYTSVKEEKNLDLLYKYIVHKTYG 288 >gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT00034450001 [Paramecium tetraurelia strain d4-2] gi|124399480|emb|CAK64972.1| unnamed protein product [Paramecium tetraurelia] Length = 425 Score = 38.9 bits (89), Expect = 0.58, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 117/299 (39%), Gaps = 29/299 (9%) Query: 58 RTILVLGSKCVGKTTAINKFFD---------REEHATRPTLALEYS--FGRRIGSGKSPQ 106 + +L+LG KC GK + ++ D R++ T P + Y R + Sbjct: 24 KNLLILGRKCSGKRSLLDALADVTKTLKNGIRQKGIT-PIVDYAYLNLIDLRDPDYNTNA 82 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 +NV+ L + + LL + ++ V++ LD+ +P F DL+ L+D Sbjct: 83 RLNVYILEE-EGQKYLLPQILNHKNIKNTFVVIALDMQEPWTFMEDLDRWIGVLQD---- 137 Query: 167 MMEKVTPELREILEQRT------VERVGQQNKDSEKLDPLPFPVIIVGGKYDVFS----G 216 MM + L E+ E ++ + G Q + L P++++ K D+ G Sbjct: 138 MMADLRLSLNELEEMKSNVMQYMSQMDGGQAHEGLLKTNLGIPLMVMVNKSDILERDDKG 197 Query: 217 FDPIIRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVV 275 D + + CLR G LLF S K KV+ + + H + P + + Sbjct: 198 KDWDQKAEIIQFCLRQFCVNYGATLLFTSVKQKINIKVMYEYVLHRLYNMPFETSQHKNL 257 Query: 276 DFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGF 334 E L I G D + I T + + VP +QL+K +KE D F Sbjct: 258 SDFESLFIPLGQDDINIIKSTFTKLANN-AIKYEESVPIVQLKKNLVKEELTVEDDQEF 315 >gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|73919260|sp|Q8R1Q8|DC1L1_MOUSE Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|19484061|gb|AAH23347.1| Dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|74198263|dbj|BAE35301.1| unnamed protein product [Mus musculus] gi|148677352|gb|EDL09299.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] Length = 523 Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 15/150 (10%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + +L+LG GKT+ I + EE+ + LEY + Sbjct: 53 LSEVSTRSR----SKLPTGKNVLLLGEDGAGKTSLIRRIQGIEEY--KKGRGLEYLYLNV 106 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + Q NVW L + LL+ + L+ V+L++D+S+P WT L+ Sbjct: 107 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVDMSKP---WTALDSLQ 163 Query: 158 KG---LRDTAQQMMEKVTPELREILEQRTV 184 K +R+ ++ K+ PE + +EQ+ + Sbjct: 164 KWASVVREHVDKL--KIPPEEMKEMEQKLI 191 >gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae str. PEST] gi|157018577|gb|EAA06916.4| AGAP000723-PA [Anopheles gambiae str. PEST] Length = 470 Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 20/170 (11%) Query: 52 TTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF-GRRIGSGKSPQVMNV 110 T P +++LVLG GKTT I K E+ + LEY++ R ++V Sbjct: 13 TKLPSNKSVLVLGDNASGKTTLIAKLQGVED--PKKGSGLEYAYIDVRDEYRDDVTRLSV 70 Query: 111 WELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD-------- 162 W L LL+ + VIL L ++ P + L+ K L D Sbjct: 71 WILDGDPGHNNLLKFALNEQNFPHTLVILTLSMTTPWSWVDQLQHWMKILDDHIAGLKID 130 Query: 163 --TAQQMMEKVTPELREILEQ-------RTVERVGQQNKDSEKLDPLPFP 203 QQ ++T E + E ++R + ++LD LP P Sbjct: 131 PEEKQQCQARLTTEWQNYCETIDDLDPGSPIKRTNRLPSVDDELDALPLP 180 >gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 15/150 (10%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + +L+LG GKT+ I + EE+ + LEY + Sbjct: 53 LSEVSTRSR----SKLPTGKNVLLLGEDGAGKTSLIRRIQGIEEY--KKGRGLEYLYLNV 106 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + Q NVW L + LL+ + L+ V+L++D+S+P WT L+ Sbjct: 107 HDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVDMSKP---WTALDSLQ 163 Query: 158 KG---LRDTAQQMMEKVTPELREILEQRTV 184 K +R+ ++ K+ PE + +EQ+ + Sbjct: 164 KWASVVREHVDKL--KIPPEEMKEMEQKLI 191 >gi|123473325|ref|XP_001319851.1| Ras family protein [Trichomonas vaginalis G3] gi|121902644|gb|EAY07628.1| Ras family protein [Trichomonas vaginalis G3] Length = 201 Score = 38.1 bits (87), Expect = 0.97, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 11/102 (10%) Query: 57 ERTILVLGSKCVGKTTAINKFFDRE-EHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 E +++LG VGKT+ I++F ++ +H PT+ + + + V+N+W+ Sbjct: 12 EYKVVMLGDSNVGKTSIIHRFIEKSFDHDYEPTVGASF-LTKVMKVDTDKLVLNIWDTAG 70 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRF-----WTD 152 + + L+ T+ A IL+ D+ P F W D Sbjct: 71 QERYKSLIS----TYARNAHAAILVYDVMNPDTFTNVEKWRD 108 >gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light intermediate chain 1 [Danio rerio] gi|94733316|emb|CAK11123.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632686|emb|CAM56699.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 501 Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 100/281 (35%), Gaps = 51/281 (18%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 ES P +D + + + P + ++V+G GKTT + K EE+ Sbjct: 22 ESQNPEEEDGQNLWSSILSEVSTRSRSKLPSGKNVVVMGEVGSGKTTLVAKLQGVEEYMK 81 Query: 86 RPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 L Y F N W L + L + + L+ ++ ++DLS+ Sbjct: 82 GRGLEYLY-FNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSR 140 Query: 146 PQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLP- 201 P W L+ K +RD ++ +V PE LE R ++ + + LD +P Sbjct: 141 P---WLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQ 195 Query: 202 -------------------------FPVIIVGGKYDVFSGFDP----------IIRKHTC 226 P+++V K D S + I+ H Sbjct: 196 RRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIR 255 Query: 227 R-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 R CL+ G ALL+ S K K +L + H +G P Sbjct: 256 RFCLQ-----YGAALLYTSMKENKNLDLLYKYLVHRLYGFP 291 >gi|53733161|ref|ZP_00156084.2| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) [Haemophilus influenzae R2866] Length = 363 Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%) Query: 5 LIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG 64 LIF++ H +MF ++ GG+ I+ + R+ +E + L + ++ +PKE T L LG Sbjct: 56 LIFNNTHVIPARMFGRKASGGK-----IEVLVERMLDEHRFLAHIRSSKSPKEGTELFLG 110 Query: 65 SKCVGKTTAI 74 +G+ I Sbjct: 111 EDKLGENNGI 120 >gi|145639843|ref|ZP_01795444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus influenzae PittII] gi|145271061|gb|EDK10977.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus influenzae PittII] Length = 362 Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 5/70 (7%) Query: 5 LIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG 64 LIF++ H +MF ++ GG+ I+ + R+ +E + L + ++ +PKE T L LG Sbjct: 56 LIFNNTHVIPARMFGRKASGGK-----IEVLVERMLDEHRFLAHIRSSKSPKEGTELFLG 110 Query: 65 SKCVGKTTAI 74 +G+ I Sbjct: 111 EDKLGENNGI 120 >gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] gi|73919261|sp|Q9QXU8|DC1L1_RAT Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|6651427|gb|AAF22294.1|AF181992_1 dynein light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%) Query: 55 PKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVM-NVWEL 113 P + +L+LG GKT+ I + EE+ + LEY + + Q NVW L Sbjct: 65 PTGKNVLLLGEDGAGKTSLIRRIQGIEEY--KKGRGLEYLYLNVHDEDRDDQTRCNVWIL 122 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMMEK 170 + LL+ + L+ V+L++D+S+P WT L+ K +R+ ++ K Sbjct: 123 DGDLYHKGLLKFSLDALSLRDTLVMLVVDMSKP---WTALDSLQKWASVVREHVDKL--K 177 Query: 171 VTPELREILEQRTV 184 + PE + +EQ+ + Sbjct: 178 IPPEEMKEMEQKLI 191 >gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632687|emb|CAM56700.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 489 Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 100/281 (35%), Gaps = 51/281 (18%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 ES P +D + + + P + ++V+G GKTT + K EE+ Sbjct: 20 ESQNPEEEDGQNLWSSILSEVSTRSRSKLPSGKNVVVMGEVGSGKTTLVAKLQGVEEYMK 79 Query: 86 RPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 L Y F N W L + L + + L+ ++ ++DLS+ Sbjct: 80 GRGLEYLY-FNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSR 138 Query: 146 PQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLP- 201 P W L+ K +RD ++ +V PE LE R ++ + + LD +P Sbjct: 139 P---WLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQ 193 Query: 202 -------------------------FPVIIVGGKYDVFSGFDP----------IIRKHTC 226 P+++V K D S + I+ H Sbjct: 194 RRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIR 253 Query: 227 R-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 R CL+ G ALL+ S K K +L + H +G P Sbjct: 254 RFCLQ-----YGAALLYTSMKENKNLDLLYKYLVHRLYGFP 289 >gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] Length = 485 Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 100/281 (35%), Gaps = 51/281 (18%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 ES P +D + + + P + ++V+G GKTT + K EE+ Sbjct: 16 ESQNPEEEDGQNLWSSILSEVSTRSRSKLPSGKNVVVMGEVGSGKTTLVAKLQGVEEYMK 75 Query: 86 RPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 L Y F N W L + L + + L+ ++ ++DLS+ Sbjct: 76 GRGLEYLY-FNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSR 134 Query: 146 PQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLP- 201 P W L+ K +RD ++ +V PE LE R ++ + + LD +P Sbjct: 135 P---WLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQ 189 Query: 202 -------------------------FPVIIVGGKYDVFSGFDP----------IIRKHTC 226 P+++V K D S + I+ H Sbjct: 190 RRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIR 249 Query: 227 R-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 R CL+ G ALL+ S K K +L + H +G P Sbjct: 250 RFCLQ-----YGAALLYTSMKENKNLDLLYKYLVHRLYGFP 285 >gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|67970473|dbj|BAE01579.1| unnamed protein product [Macaca fascicularis] Length = 492 Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 21/167 (12%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P ++ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKSILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L + VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVE 185 D+S+P WT +E K LR+ +M K+ PE LE++ V+ Sbjct: 138 DMSRP---WTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVK 179 >gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Dictyostelium discoideum AX4] gi|60462801|gb|EAL61001.1| dynein light intermediate chain [Dictyostelium discoideum AX4] Length = 504 Score = 37.4 bits (85), Expect = 1.5, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 6/108 (5%) Query: 56 KERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV---MNVWE 112 ++R + +LG GK+ ++KF + ++AL Y+F S +N W Sbjct: 27 EKRDVAILGDPTSGKSLLLSKFDTVSNVESLKSIALSYTFSDIYEDDTSEDPVGRINYWS 86 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGL 160 L + LL+ + ++ VI+ LD SQP W +E K L Sbjct: 87 LEGEASQNDLLKFSLNKENIKNCMVIITLDFSQP---WNLVESLKKWL 131 >gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] Length = 492 Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 26/168 (15%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L++ VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVER 186 D+S+P WT +E K LR+ +M K+ PE E R +ER Sbjct: 138 DMSRP---WTIMESLQKWASVLREHIDKM--KIPPE-----EMRDLER 175 >gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_a [Mus musculus] Length = 527 Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 26/168 (15%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 65 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 113 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L++ VI + Sbjct: 114 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVA 172 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVER 186 D+S+P WT +E K LR+ +M K+ PE E R +ER Sbjct: 173 DMSRP---WTIMESLQKWASVLREHIDKM--KIPPE-----EMRDLER 210 >gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Rattus norvegicus] gi|2494218|sp|Q62698|DC1L2_RAT Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|619665|gb|AAA80334.1| LIC-2 gi|149032345|gb|EDL87236.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_b [Rattus norvegicus] Length = 497 Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 26/168 (15%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L++ VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVER 186 D+S+P WT +E K LR+ +M K+ PE E R +ER Sbjct: 138 DMSRP---WTIMESLQKWASVLREHIDKM--KIPPE-----EMRDLER 175 >gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic, light intermediate polypeptide 2 [Macaca mulatta] Length = 497 Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 21/167 (12%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L + VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVE 185 D+S+P WT +E K LR+ +M K+ PE LE++ V+ Sbjct: 138 DMSRP---WTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVK 179 >gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Coprinopsis cinerea okayama7#130] Length = 513 Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 77/335 (22%), Positives = 130/335 (38%), Gaps = 58/335 (17%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFF-----DREEHATRPTLALEYSFGR-RI 99 L + + + + I++LG GK+T + D + R A+ Y F + Sbjct: 21 LNSVSTSRSIPAKQIILLGQPSTGKSTIASALLQKNVSDENKDDGRIDFAVGYEFADVKD 80 Query: 100 GSGKSPQVMNVWELGSLDNAEQLLE--VPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 G+S + + S N LL VP RT L V+++LD ++P F +L+ Sbjct: 81 EEGRSSRYLMPSSSHSYTN---LLPHFVPPRT-ALPHTCVVIVLDWTRPWTFIEELQSWL 136 Query: 158 KGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGF 217 + + D A+ + E+ + E+ R G ++ + P+I+V K D+ Sbjct: 137 QWVEDWAKGDGSR---EVEIVREENRERRPGTLTHNASGV-----PIIVVCSKADLIDDG 188 Query: 218 DPIIRKHTCR---------------CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 I + LR++ L GA L Y+ +P+ ++LR HL Sbjct: 189 PEIAAGAMVKGKGGEWEERTDGIMQVLRTIC-LKYGAGLLYTTPLPETLQILRQYALHLL 247 Query: 263 FGSPA--------------HPF--RSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGA 306 F PA PF + + +D + L + G DSW KIG E A Sbjct: 248 FMPPAPSPGMEAQVPMKNIFPFQHKPNTLDRDHIL-VPAGWDSWGKIGVLR----EGFDA 302 Query: 307 TFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE 341 E + LE + + TT+P + V D+ Sbjct: 303 KLWNEAWERDLEGDQ-QSTTEPGAQKLYAAFVPDQ 336 >gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Homo sapiens] Length = 492 Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 21/167 (12%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L + VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVE 185 D+S+P WT +E K LR+ +M K+ PE LE++ V+ Sbjct: 138 DMSRP---WTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVK 179 >gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Homo sapiens] gi|3287825|sp|O43237|DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|2665836|gb|AAB88513.1| dynein light intermediate chain 2 [Homo sapiens] gi|119603445|gb|EAW83039.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|119603446|gb|EAW83040.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|158256964|dbj|BAF84455.1| unnamed protein product [Homo sapiens] Length = 492 Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 21/167 (12%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L + VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVE 185 D+S+P WT +E K LR+ +M K+ PE LE++ V+ Sbjct: 138 DMSRP---WTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVK 179 >gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] gi|73919263|sp|Q6PDL0|DC1L2_MOUSE Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|35193080|gb|AAH58645.1| Dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] Length = 492 Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 26/168 (15%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L++ VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVER 186 D+S+P WT +E K LR+ +M K+ PE E R +ER Sbjct: 138 DMSRP---WTIMESLQKWASVLREHIDKM--KIPPE-----EMRDLER 175 >gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculus] gi|74183685|dbj|BAE24463.1| unnamed protein product [Mus musculus] gi|74190862|dbj|BAE28215.1| unnamed protein product [Mus musculus] gi|74212500|dbj|BAE30992.1| unnamed protein product [Mus musculus] Length = 492 Score = 37.0 bits (84), Expect = 1.9, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 26/168 (15%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L++ VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVER 186 D+S+P WT +E K LR+ +M K+ PE E R +ER Sbjct: 138 DMSRP---WTIMESLQKWASVLREHIDKM--KIPPE-----EMRDLER 175 >gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light intermediate chain 2 isoform 3 [Bos taurus] Length = 492 Score = 37.0 bits (84), Expect = 2.1, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 21/167 (12%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L + VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVE 185 D+S+P WT +E K LR+ +M K+ PE LE++ V+ Sbjct: 138 DMSRP---WTVMESLQKWASVLREHIDKM--KIPPEEMRELERKFVK 179 >gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_a [Rattus norvegicus] Length = 455 Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 26/168 (15%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L++ VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVER 186 D+S+P WT +E K LR+ +M K+ PE E R +ER Sbjct: 138 DMSRP---WTIMESLQKWASVLREHIDKM--KIPPE-----EMRDLER 175 >gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_b [Mus musculus] Length = 458 Score = 36.6 bits (83), Expect = 2.6, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 26/168 (15%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L++ VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVER 186 D+S+P WT +E K LR+ +M K+ PE E R +ER Sbjct: 138 DMSRP---WTIMESLQKWASVLREHIDKM--KIPPE-----EMRDLER 175 >gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein light intermediate chain 2, partial [Equus caballus] Length = 490 Score = 36.6 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 21/167 (12%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 28 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 76 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L + VI + Sbjct: 77 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVA 135 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVE 185 D+S+P WT +E K LR+ +M K+ PE LE++ V+ Sbjct: 136 DMSRP---WTVMESLQKWASVLREHIDKM--KIPPEEMRELERKFVK 177 >gi|148472930|emb|CAB07402.3| Hypothetical protein R03E1.3 [Caenorhabditis elegans] Length = 502 Score = 36.6 bits (83), Expect = 2.8, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 7/89 (7%) Query: 100 GSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL-----SQPQRFWTDLE 154 GSG++P++++++ + L +A Q + + +L LDL PQRF D Sbjct: 312 GSGRTPKIVHLYNMNLLLSAVQFVLIVFSEFLRLRLPKKFELDLGFDIIGVPQRFGVDKL 371 Query: 155 CAYKGLRDTAQQMMEKV--TPELREILEQ 181 KGL Q++ V T L EILEQ Sbjct: 372 FTQKGLSFDPQELFSNVYSTRTLEEILEQ 400 >gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light intermediate chain 2, cytosolic (LIC53/55) (LIC-2) [Canis familiaris] Length = 481 Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 44/151 (29%), Positives = 65/151 (43%), Gaps = 15/151 (9%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P + ILV G GKTT + K EH + LEY + Sbjct: 29 LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAEHGKKGR-GLEYLYLSV 82 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + NVW L + LL+ + L + VI + D+S+P WT +E Sbjct: 83 HDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSRP---WTVMESLQ 139 Query: 158 KG---LRDTAQQMMEKVTPELREILEQRTVE 185 K LR+ +M K+ PE LE++ V+ Sbjct: 140 KWASVLREHIDKM--KIPPEEMRELERKFVK 168 >gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] Length = 209 Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 21/167 (12%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 E G+S SI L+E R R + P + ILV G GKTT + K E Sbjct: 30 EEGQSLWSSI------LSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMTKL-QGAE 78 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 H + LEY + + NVW L + LL+ + L + VI + Sbjct: 79 HGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVA 137 Query: 142 DLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVE 185 D+S+P WT +E K LR+ +M K+ PE LE++ V+ Sbjct: 138 DMSRP---WTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVK 179 >gi|71994503|ref|NP_510359.2| R03E1.3 [Caenorhabditis elegans] Length = 467 Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 7/89 (7%) Query: 100 GSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL-----SQPQRFWTDLE 154 GSG++P++++++ + L +A Q + + +L LDL PQRF D Sbjct: 277 GSGRTPKIVHLYNMNLLLSAVQFVLIVFSEFLRLRLPKKFELDLGFDIIGVPQRFGVDKL 336 Query: 155 CAYKGLRDTAQQMMEKV--TPELREILEQ 181 KGL Q++ V T L EILEQ Sbjct: 337 FTQKGLSFDPQELFSNVYSTRTLEEILEQ 365 >gi|154420577|ref|XP_001583303.1| Ras family protein [Trichomonas vaginalis G3] gi|121917544|gb|EAY22317.1| Ras family protein [Trichomonas vaginalis G3] Length = 203 Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 6/91 (6%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 +++LG VGKT+ IN++ ++ + T+ ++Y F + + P + +W+ + Sbjct: 8 VILLGDSAVGKTSIINQYIYNSSGTDYKTTIGIDY-FTKNVNIDGVPVRLQIWDTAGQEK 66 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRF 149 ++ +R + VIL+ D++Q Q F Sbjct: 67 FHAIIPSYIRNVSI----VILVFDITQRQSF 93 >gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|55726458|emb|CAH89998.1| hypothetical protein [Pongo pygmaeus] Length = 492 Score = 36.2 bits (82), Expect = 3.4, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 11/135 (8%) Query: 55 PKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVM-NVWEL 113 P + ILV G GKTT + K EH + LEY + + NVW L Sbjct: 52 PSGKNILVFGEDGSGKTTLMTKL-QGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWIL 109 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMMEK 170 + LL+ + L + VI + D+S+P WT +E K LR+ +M K Sbjct: 110 DGDLYHKGLLKFAVSAESLPETLVIFVADMSRP---WTVMESLQKWASVLREHIDKM--K 164 Query: 171 VTPELREILEQRTVE 185 + PE LE++ V+ Sbjct: 165 IPPEKMRELERKFVK 179 >gi|123452986|ref|XP_001314549.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121897079|gb|EAY02211.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 195 Score = 36.2 bits (82), Expect = 3.7, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Query: 60 ILVLGSKCVGKTTAINKFFDRE-EHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 +++LG+ CVGKT+ + +F+ + +PT+ Y F + I + K MNVW+ + Sbjct: 12 VILLGNTCVGKTSIVLQFYKALFQEQGQPTIGAAY-FSKIIDTPKGKLNMNVWDSAGQER 70 Query: 119 AEQLLEVPMRTHG 131 + +PM G Sbjct: 71 FRSI--IPMYLRG 81 >gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light chain A [Gallus gallus] gi|2494217|sp|Q90828|DC1L1_CHICK Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) (LIC57/59) gi|510249|emb|CAA55698.1| dyenin light chain A [Gallus sp.] Length = 515 Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 11/148 (7%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRR 98 L+E R R + P +++L+LG GKT+ I K EE+ + +EY + Sbjct: 43 LSEVSTRSR----SKLPSGKSVLLLGEDGAGKTSLIGKIQGIEEY--KKGRGMEYLYLNV 96 Query: 99 IGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAY 157 + Q NV L + LL+ M + L+ ++L++D+S+P WT ++ Sbjct: 97 HDEDRDDQTRCNVRILDGDLYHKGLLKFAMEANSLKDTLIMLVVDMSRP---WTAMDSLQ 153 Query: 158 KGLRDTAQQMME-KVTPELREILEQRTV 184 K + + + K+ PE + +EQ+ V Sbjct: 154 KWASVVREHIDKLKIPPEEMKEMEQKLV 181 >gi|68248853|ref|YP_247965.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus influenzae 86-028NP] gi|81336732|sp|Q4QNU2|QUEA_HAEI8 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine biosynthesis protein queA) gi|68057052|gb|AAX87305.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus influenzae 86-028NP] Length = 363 Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 5/70 (7%) Query: 5 LIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG 64 LIF++ H +MF ++ GG+ I+ + R+ +E + L + ++ +PKE L LG Sbjct: 56 LIFNNTHVIPARMFGRKASGGK-----IEVLVERMLDEHRFLAHIRSSKSPKEGAELFLG 110 Query: 65 SKCVGKTTAI 74 +G+ I Sbjct: 111 EDKLGENNGI 120 >gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, isoform A [Tribolium castaneum] Length = 475 Score = 35.4 bits (80), Expect = 5.7, Method: Composition-based stats. Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 5/146 (3%) Query: 55 PKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWEL 113 P + +LVLG GKTT + K E+ + LEY++ + Q ++VW L Sbjct: 33 PSCKQVLVLGDNECGKTTIVAKLQGVED--PKKGSGLEYAYIDVRDDYRDDQTRLSVWVL 90 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 LL+ + Q VIL + ++ P L+ L D ++ K+ Sbjct: 91 DGDPGHTDLLKFALNEETFQHTLVILTVTMTAPWSILEQLQHWASVLADHLDKL--KLDV 148 Query: 174 ELREILEQRTVERVGQQNKDSEKLDP 199 +LR+ Q V+ + + ++LDP Sbjct: 149 DLRQNRRQHIVKMWQEYVEPGDELDP 174 >gi|66822349|ref|XP_644529.1| hypothetical protein DDBDRAFT_0217326 [Dictyostelium discoideum AX4] gi|66822733|ref|XP_644721.1| small GTPase [Dictyostelium discoideum AX4] gi|28828804|gb|AAO51399.1| hypothetical protein [Dictyostelium discoideum] gi|60472652|gb|EAL70603.1| hypothetical protein DDBDRAFT_0217326 [Dictyostelium discoideum AX4] gi|60472818|gb|EAL70767.1| small GTPase [Dictyostelium discoideum AX4] Length = 220 Score = 35.4 bits (80), Expect = 6.5, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 10/74 (13%) Query: 56 KERTILVLGSKCVGKT----TAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 K+ I LG KCVGKT T +N FFD E+++ PT+ +++ ++ S K +N++ Sbjct: 3 KKLNICFLGDKCVGKTSTIHTMVNSFFDDEKYS--PTIESKFT---KLFSYKVLYNLNIY 57 Query: 112 EL-GSLDNAEQLLE 124 + GS++ LL+ Sbjct: 58 DTAGSIEMESILLD 71 >gi|145513438|ref|XP_001442630.1| hypothetical protein GSPATT00001436001 [Paramecium tetraurelia strain d4-2] gi|74831381|emb|CAI39293.1| rab_C67 [Paramecium tetraurelia] gi|124409983|emb|CAK75233.1| unnamed protein product [Paramecium tetraurelia] Length = 196 Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 35/54 (64%), Gaps = 2/54 (3%) Query: 60 ILVLGSKCVGKTTAINKFFDREEHAT-RPTLALEYSFGRRIGSGKSPQVMNVWE 112 IL+LG + VGK++ +N++ D + + T + TL +EY + I +G+S + VW+ Sbjct: 7 ILMLGERSVGKSSLLNRYIDDKFYDTIQATLGVEYK-QKVITNGESQLTVQVWD 59 >gi|118044652|ref|ZP_01513358.1| hypothetical protein BphytDRAFT_0788 [Burkholderia phytofirmans PsJN] gi|117987682|gb|EAV02013.1| hypothetical protein BphytDRAFT_0788 [Burkholderia phytofirmans PsJN] Length = 473 Score = 35.0 bits (79), Expect = 8.7, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 10/136 (7%) Query: 85 TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 TR + F R IG +P + +E G + QL + +R H +Q + L+ + Sbjct: 223 TREHRERRFKFMRNIGDEVAPHRIGAFEFGDVLREHQLAILAVRKHLYRQHVLALVAHAA 282 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPV 204 Q F+ + A QM + +T + R+ + K +++ PL V Sbjct: 283 HDQHFFVAMRIQIANEVRLAHQMCDVLT---------QIALRIQTEMKLGDRVAPLDL-V 332 Query: 205 IIVGGKYDVFSGFDPI 220 +IV ++ V G D + Sbjct: 333 VIVEHRHAVRRGLDSL 348 >gi|123475948|ref|XP_001321149.1| Ras family protein [Trichomonas vaginalis G3] gi|121903969|gb|EAY08926.1| Ras family protein [Trichomonas vaginalis G3] Length = 207 Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEY-SFGRRIGSGKSPQVMNVWELGSLD 117 +++LG+ VGKTT + ++ DR + +++PT+ Y S GK+ MN+W+ D Sbjct: 8 VVLLGNSAVGKTTLVTRWTEDRYDGSSQPTIGAAYKSVTLEFDDGKTYS-MNIWDTAGQD 66 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRF 149 + R A +++ DL+ F Sbjct: 67 EYRSTTSIYCR----DAKAAMIVFDLTDRSSF 94 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melano... 545 e-153 gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoob... 504 e-141 gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 lig... 478 e-133 gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] 473 e-132 gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light inter... 465 e-129 gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain is... 461 e-128 gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein... 461 e-128 gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain i... 459 e-128 gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 ligh... 459 e-127 gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light int... 459 e-127 gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein... 457 e-127 gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermed... 456 e-126 gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermed... 455 e-126 gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] 454 e-126 gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermed... 452 e-125 gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chai... 448 e-124 gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] 446 e-123 gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 ... 441 e-122 gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [S... 435 e-120 gi|157119433|ref|XP_001653379.1| conserved hypothetical protein ... 434 e-120 gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] 430 e-119 gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae s... 427 e-118 gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibencla... 420 e-116 gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella... 413 e-113 gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Dan... 399 e-109 gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon n... 363 1e-98 gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chai... 345 4e-93 gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Tr... 344 4e-93 gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated fa... 344 6e-93 gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 ... 342 2e-92 gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00... 324 5e-87 gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Tr... 318 3e-85 gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [... 316 1e-84 gi|154343515|ref|XP_001567703.1| dynein light intermediate chain... 293 1e-77 gi|146097038|ref|XP_001468017.1| dynein light intermediate chain... 292 4e-77 gi|157874331|ref|XP_001685649.1| dynein light intermediate chain... 286 2e-75 gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 ligh... 285 3e-75 gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermedia... 283 9e-75 gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_002... 274 9e-72 gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermedi... 253 2e-65 gi|123423641|ref|XP_001306418.1| conserved hypothetical protein ... 240 2e-61 gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Tr... 236 2e-60 gi|123415018|ref|XP_001304608.1| conserved hypothetical protein ... 233 2e-59 gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light int... 232 3e-59 gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain i... 219 2e-55 gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermed... 217 8e-55 gi|115690607|ref|XP_001202918.1| PREDICTED: similar to Dynein, c... 211 4e-53 gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [G... 199 3e-49 gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT0001... 169 2e-40 gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT0000... 163 1e-38 gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermedi... 156 2e-36 gi|57092883|ref|XP_531798.1| PREDICTED: similar to dynein 2 ligh... 147 2e-33 gi|26252194|gb|AAH40558.1| DYNC2LI1 protein [Homo sapiens] 146 3e-33 gi|158599820|gb|EDP37275.1| hypothetical protein Bm1_12090 [Brug... 111 7e-23 Sequences not found previously or not previously below threshold: gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein... 185 3e-45 gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light inter... 168 6e-40 gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin li... 161 7e-38 gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein li... 160 1e-37 gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermed... 158 5e-37 gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermed... 158 5e-37 gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermedi... 158 5e-37 gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light int... 158 5e-37 gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermed... 158 6e-37 gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light ... 157 7e-37 gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermedi... 157 9e-37 gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light int... 157 1e-36 gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo s... 157 1e-36 gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermed... 157 1e-36 gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculu... 156 2e-36 gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light inte... 156 2e-36 gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light interme... 156 3e-36 gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light inte... 155 4e-36 gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light interme... 155 4e-36 gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] 155 5e-36 gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A is... 155 5e-36 gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermed... 154 8e-36 gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light int... 154 9e-36 gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] 154 1e-35 gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] 153 1e-35 gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light ... 153 2e-35 gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [D... 153 2e-35 gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light ... 152 2e-35 gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo s... 152 2e-35 gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon n... 152 3e-35 gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light... 149 4e-34 gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 ... 148 6e-34 gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-interm... 142 2e-32 gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] 142 3e-32 gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic,... 142 4e-32 gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 ... 141 6e-32 gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate ... 141 1e-31 gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] 141 1e-31 gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-interm... 141 1e-31 gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light inte... 140 1e-31 gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A... 137 1e-30 gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin li... 134 1e-29 gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein li... 132 3e-29 gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon n... 129 3e-28 gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella... 127 1e-27 gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] 122 3e-26 gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermedi... 122 4e-26 gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermed... 122 4e-26 gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [S... 115 5e-24 gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, is... 110 1e-22 gi|157128066|ref|XP_001661298.1| dynein light intermediate chain... 109 3e-22 gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoob... 108 6e-22 gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosoph... 108 6e-22 gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae s... 105 5e-21 gi|158597036|gb|EDP35273.1| dynein 2 light intermediate chain, p... 104 7e-21 gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938... 104 1e-20 gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] 103 2e-20 gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00... 102 6e-20 gi|158602493|gb|EDP38908.1| dynein light intermediate chain, put... 92 8e-17 gi|71401049|ref|XP_803244.1| dynein light intermediate chain [Tr... 91 1e-16 gi|119584836|gb|EAW64432.1| dynein, cytoplasmic 1, light interme... 91 2e-16 gi|157863075|gb|ABV90642.1| cytoplasmic dynein light intermediat... 90 2e-16 gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [... 90 3e-16 gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Di... 88 8e-16 gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT0003... 85 8e-15 gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain fam... 84 1e-14 gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT0003... 83 4e-14 gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain fam... 82 7e-14 gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Cop... 81 1e-13 gi|76162568|gb|AAX30491.2| SJCHGC04029 protein [Schistosoma japo... 76 4e-12 gi|125858836|gb|AAI29880.1| Dync1li1 protein [Mus musculus] 75 6e-12 gi|146164455|ref|XP_001013126.2| Ras family protein [Tetrahymena... 73 3e-11 gi|134106957|ref|XP_777791.1| hypothetical protein CNBA4890 [Cry... 73 3e-11 gi|123390419|ref|XP_001299882.1| small GTP-binding protein, puta... 71 1e-10 gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light interme... 71 1e-10 gi|58258773|ref|XP_566799.1| hypothetical protein [Cryptococcus ... 70 2e-10 gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosoph... 69 4e-10 gi|124783774|gb|ABN14940.1| dynein light chain-A variant [Taenia... 69 5e-10 gi|158290784|ref|XP_312349.4| AGAP002589-PA [Anopheles gambiae s... 66 4e-09 gi|45190737|ref|NP_984991.1| AER132Wp [Ashbya gossypii ATCC 1089... 66 5e-09 gi|46135805|ref|XP_389594.1| hypothetical protein FG09418.1 [Gib... 66 5e-09 gi|159106574|gb|EDP45457.1| hypothetical protein MGL_0446 [Malas... 66 5e-09 gi|123456026|ref|XP_001315752.1| small GTP-binding protein, puta... 62 5e-08 gi|117939047|dbj|BAF36677.1| Small G Protein RAB [Pyrsonympha gr... 61 1e-07 gi|117939057|dbj|BAF36682.1| Small G Protein RAB [Dinenympha exi... 61 1e-07 gi|117939049|dbj|BAF36678.1| Small G Protein RAB [Pyrsonympha gr... 61 1e-07 gi|117939059|dbj|BAF36683.1| Small G Protein RAB [Dinenympha exi... 61 1e-07 gi|117939061|dbj|BAF36684.1| Small G Protein RAB [Dinenympha exi... 61 1e-07 gi|117939043|dbj|BAF36675.1| Small G Protein RAB [Pyrsonympha gr... 61 2e-07 gi|50303633|ref|XP_451758.1| unnamed protein product [Kluyveromy... 60 2e-07 gi|123473325|ref|XP_001319851.1| Ras family protein [Trichomonas... 59 4e-07 gi|124506681|ref|XP_001351938.1| hypothetical protein PFI0315c [... 59 6e-07 gi|71018751|ref|XP_759606.1| hypothetical protein UM03459.1 [Ust... 59 7e-07 gi|156842204|ref|XP_001644471.1| hypothetical protein Kpol_520p3... 57 1e-06 gi|119174895|ref|XP_001239770.1| hypothetical protein CIMG_09391... 57 2e-06 gi|123491233|ref|XP_001325784.1| small GTP-binding protein, puta... 57 3e-06 gi|123454517|ref|XP_001315011.1| small GTP-binding protein, puta... 57 3e-06 gi|17542952|ref|NP_501609.1| RAB family member (rab-28) [Caenorh... 56 4e-06 gi|123374113|ref|XP_001297704.1| small GTP-binding protein, puta... 54 1e-05 gi|154421140|ref|XP_001583584.1| Ras family protein [Trichomonas... 54 1e-05 gi|121713178|ref|XP_001274200.1| dynein light intermediate chain... 54 2e-05 gi|154413508|ref|XP_001579784.1| hypothetical protein TVAG_26831... 54 2e-05 gi|123411399|ref|XP_001303883.1| small GTP-binding protein, puta... 54 2e-05 gi|15236081|ref|NP_195699.1| AtRABH1c (Arabidopsis Rab GTPase ho... 53 2e-05 gi|39971217|ref|XP_366999.1| hypothetical protein MGG_03075 [Mag... 53 3e-05 gi|50293691|ref|XP_449257.1| unnamed protein product [Candida gl... 53 3e-05 gi|146075496|ref|XP_001462715.1| small GTP binding protein rab6-... 53 3e-05 gi|146183027|ref|XP_001025689.2| Ras family protein [Tetrahymena... 53 3e-05 gi|156552282|ref|XP_001602002.1| PREDICTED: similar to low-Mr GT... 53 4e-05 gi|145534728|ref|XP_001453108.1| hypothetical protein GSPATT0001... 52 4e-05 gi|2408103|emb|CAA04846.1| sid3 [Schizosaccharomyces pombe] 52 4e-05 gi|19114197|ref|NP_593285.1| GTPase Spg1 [Schizosaccharomyces po... 52 5e-05 gi|68466093|ref|XP_722821.1| putative ARF-like GTPase [Candida a... 52 6e-05 gi|82594415|ref|XP_725415.1| dynein light intermediate chain 2, ... 52 6e-05 gi|154298912|ref|XP_001549877.1| septum-promoting GTP-binding pr... 52 7e-05 gi|71745978|ref|XP_822225.1| small GTP binding protein rab6-like... 52 7e-05 gi|146184753|ref|XP_001030061.2| Ras family protein [Tetrahymena... 52 7e-05 gi|145538097|ref|XP_001454754.1| hypothetical protein GSPATT0002... 52 7e-05 gi|145602494|ref|XP_359915.2| conserved hypothetical protein [Ma... 52 7e-05 gi|115312968|gb|AAI24015.1| Rab12 protein [Xenopus tropicalis] 52 8e-05 gi|29500803|gb|AAO75106.1| ComB [Dictyostelium discoideum] 52 9e-05 gi|115398722|ref|XP_001214950.1| conserved hypothetical protein ... 52 9e-05 gi|145542895|ref|XP_001457134.1| hypothetical protein GSPATT0002... 51 1e-04 gi|157755227|ref|XP_001669957.1| Hypothetical protein CBG15075 [... 51 1e-04 gi|145478533|ref|XP_001425289.1| hypothetical protein GSPATT0002... 51 1e-04 gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene fami... 51 1e-04 gi|123403919|ref|XP_001302332.1| Ras family protein [Trichomonas... 51 1e-04 gi|134024040|gb|AAI35229.1| Rab12 protein [Xenopus tropicalis] 51 2e-04 gi|47225130|emb|CAF98757.1| unnamed protein product [Tetraodon n... 51 2e-04 gi|67536988|ref|XP_662268.1| hypothetical protein AN4664.2 [Aspe... 51 2e-04 gi|118365218|ref|XP_001015830.1| Ras family protein [Tetrahymena... 51 2e-04 gi|156390336|ref|XP_001635227.1| predicted protein [Nematostella... 51 2e-04 gi|156390340|ref|XP_001635229.1| predicted protein [Nematostella... 51 2e-04 gi|17551732|ref|NP_499178.1| ARF-Like family member (arl-5) [Cae... 51 2e-04 gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanos... 51 2e-04 gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [... 51 2e-04 gi|85098809|ref|XP_960671.1| hypothetical protein [Neurospora cr... 51 2e-04 gi|119479611|ref|XP_001259834.1| conserved hypothetical protein ... 51 2e-04 gi|157070013|gb|EAA31435.2| protein TEM1 [Neurospora crassa OR74A] 50 2e-04 gi|123493610|ref|XP_001326326.1| small GTP-binding protein, puta... 50 2e-04 gi|156383598|ref|XP_001632920.1| predicted protein [Nematostella... 50 3e-04 gi|149236742|ref|XP_001524248.1| ADP-ribosylation factor 1 [Lodd... 50 3e-04 gi|156097140|ref|XP_001614603.1| hypothetical protein PVX_098765... 50 3e-04 gi|116194005|ref|XP_001222815.1| hypothetical protein CHGG_06720... 50 3e-04 gi|159479896|ref|XP_001698022.1| small rab-related GTPase [Chlam... 50 3e-04 gi|159111068|ref|XP_001705767.1| RabF [Giardia lamblia ATCC 5080... 49 4e-04 gi|110761970|ref|XP_001122072.1| PREDICTED: similar to chrowded ... 49 4e-04 gi|118401353|ref|XP_001032997.1| Ras family protein [Tetrahymena... 49 4e-04 gi|145496208|ref|XP_001434095.1| hypothetical protein GSPATT0003... 49 4e-04 gi|47220567|emb|CAG05593.1| unnamed protein product [Tetraodon n... 49 4e-04 gi|45201317|ref|NP_986887.1| AGR221Wp [Ashbya gossypii ATCC 1089... 49 4e-04 gi|74831376|emb|CAI39292.1| rab_C68 [Paramecium tetraurelia] 49 5e-04 gi|9857537|gb|AAG00892.1|AC064879_10 Similar to ADP-ribosylation... 49 5e-04 gi|145334994|ref|NP_171745.3| ATARFD1B (ADP-ribosylation factor ... 49 5e-04 gi|123451581|ref|XP_001313965.1| small GTP-binding protein, puta... 49 5e-04 gi|145533477|ref|XP_001452483.1| hypothetical protein GSPATT0000... 49 5e-04 gi|123479672|ref|XP_001322993.1| Ras family protein [Trichomonas... 49 5e-04 gi|154420093|ref|XP_001583062.1| Ras family protein [Trichomonas... 49 5e-04 gi|89258433|gb|ABD65440.1| Rab21-like [Suberites domuncula] 49 5e-04 gi|146417402|ref|XP_001484670.1| hypothetical protein PGUG_02399... 49 6e-04 gi|116812567|ref|NP_065120.2| RAB25 [Homo sapiens] >gnl|BL_ORD_I... 49 6e-04 gi|31980838|ref|NP_058595.2| RAB25, member RAS oncogene family [... 49 6e-04 gi|9789019|gb|AAF98238.1| unknown [Homo sapiens] 49 6e-04 gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (p... 49 6e-04 gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RA... 49 6e-04 gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab2... 49 6e-04 gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, i... 49 6e-04 gi|149751384|ref|XP_001499799.1| PREDICTED: similar to RAB25, me... 49 6e-04 gi|70935784|ref|XP_738930.1| hypothetical protein PC000669.03.0 ... 49 6e-04 gi|29841343|gb|AAP06375.1| similar to NM_130025 putative small G... 49 6e-04 gi|157774367|ref|XP_001665249.1| Hypothetical protein CBG09985 [... 49 6e-04 gi|123471387|ref|XP_001318893.1| small GTP-binding protein, puta... 49 7e-04 gi|50405593|ref|XP_456433.1| hypothetical protein DEHA0A02585g [... 49 7e-04 gi|1172845|sp|P46629|RAB25_RABIT Ras-related protein Rab-25 >gnl... 49 7e-04 gi|126307642|ref|XP_001367187.1| PREDICTED: similar to RAB25, me... 49 7e-04 gi|66812636|ref|XP_640497.1| Rab GTPase domain-containing protei... 48 8e-04 gi|74833811|emb|CAI39365.1| rab_A32 [Paramecium tetraurelia] 48 8e-04 gi|156371538|ref|XP_001628820.1| predicted protein [Nematostella... 48 8e-04 gi|159472783|ref|XP_001694524.1| small rab-related GTPase [Chlam... 48 8e-04 gi|145477535|ref|XP_001424790.1| hypothetical protein GSPATT0002... 48 8e-04 gi|123234717|emb|CAM17123.1| RAB12, member RAS oncogene family [... 48 8e-04 gi|46125085|ref|XP_387096.1| conserved hypothetical protein [Gib... 48 9e-04 gi|50427459|ref|XP_462342.1| hypothetical protein DEHA0G19613g [... 48 9e-04 gi|41053575|ref|NP_957140.1| hypothetical protein LOC393819 [Dan... 48 0.001 gi|123506780|ref|XP_001329276.1| Ras family protein [Trichomonas... 48 0.001 gi|6319641|ref|NP_009723.1| Arl1p [Saccharomyces cerevisiae] >gn... 48 0.001 gi|123479410|ref|XP_001322863.1| small GTP-binding protein, puta... 48 0.001 gi|126274146|ref|XP_001387436.1| GTP-binding protein of the rab ... 48 0.001 gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena... 48 0.001 gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis] 48 0.001 gi|106507168|ref|NP_077768.2| RAB12, member RAS oncogene family ... 48 0.001 gi|62988286|ref|NP_001017936.1| RAB25, member RAS oncogene famil... 48 0.001 gi|73961577|ref|XP_547540.2| PREDICTED: similar to Ras-related p... 48 0.001 gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [B... 48 0.001 gi|123406273|ref|XP_001302762.1| small GTP-binding protein, puta... 48 0.001 gi|145510136|ref|XP_001441001.1| hypothetical protein GSPATT0000... 48 0.001 gi|145602360|ref|XP_359801.2| conserved hypothetical protein [Ma... 48 0.001 gi|154420577|ref|XP_001583303.1| Ras family protein [Trichomonas... 48 0.001 gi|154319981|ref|XP_001559307.1| ADP-ribosylation factor-like pr... 48 0.001 gi|156065069|ref|XP_001598456.1| hypothetical protein SS1G_00545... 48 0.001 gi|123401357|ref|XP_001301845.1| small GTP-binding protein, puta... 47 0.001 gi|110758776|ref|XP_001121803.1| PREDICTED: similar to CG6560-PA... 47 0.001 gi|123470795|ref|XP_001318601.1| small GTP-binding protein, puta... 47 0.001 gi|111063322|gb|EAT84442.1| hypothetical protein SNOG_08166 [Pha... 47 0.001 gi|158595378|gb|EDP33937.1| RAS-related protein F43D9.2, putativ... 47 0.001 gi|85091674|ref|XP_959017.1| hypothetical protein [Neurospora cr... 47 0.001 gi|73966142|ref|XP_851644.1| PREDICTED: similar to ADP-ribosylat... 47 0.001 gi|118383836|ref|XP_001025072.1| Ras family protein [Tetrahymena... 47 0.001 gi|50290559|ref|XP_447711.1| hypothetical protein CAGL0I10835g [... 47 0.001 gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japo... 47 0.001 gi|123468458|ref|XP_001317447.1| Ras family protein [Trichomonas... 47 0.001 gi|149723892|ref|XP_001501487.1| PREDICTED: similar to ADP-ribos... 47 0.001 gi|70990240|ref|XP_749969.1| Ras GTPase Rab11, putative [Aspergi... 47 0.001 gi|125558411|gb|EAZ03947.1| hypothetical protein OsI_025179 [Ory... 47 0.001 gi|125600315|gb|EAZ39891.1| hypothetical protein OsJ_023374 [Ory... 47 0.001 gi|145529337|ref|XP_001450457.1| hypothetical protein GSPATT0001... 47 0.002 gi|145534648|ref|XP_001453068.1| hypothetical protein GSPATT0001... 47 0.002 gi|62736278|gb|AAX97468.1| small Rab GTPase RabC2 [Trichomonas v... 47 0.002 gi|123448104|ref|XP_001312785.1| small GTP-binding protein, puta... 47 0.002 gi|113475136|ref|YP_721197.1| Miro-like [Trichodesmium erythraeu... 47 0.002 gi|157818685|ref|NP_001101157.1| RAB25, member RAS oncogene fami... 47 0.002 gi|158186685|ref|NP_037149.1| RAB12, member RAS oncogene family ... 47 0.002 gi|123429797|ref|XP_001307754.1| small GTP-binding protein, puta... 47 0.002 gi|26341846|dbj|BAC34585.1| unnamed protein product [Mus musculus] 47 0.002 gi|145525673|ref|XP_001448653.1| hypothetical protein GSPATT0001... 47 0.002 gi|154331448|ref|XP_001561542.1| small GTP binding protein rab6-... 47 0.002 gi|157754295|ref|XP_001669491.1| Hypothetical protein CBG00431 [... 47 0.002 gi|50082727|gb|AAT70058.1| Rab GTPase [Euplotes octocarinatus] 47 0.002 gi|17532861|ref|NP_495779.1| abnormal Eversion of VuLva family m... 47 0.002 gi|110749601|ref|XP_001120659.1| PREDICTED: similar to RAB28, me... 47 0.002 gi|147899611|ref|NP_001088905.1| hypothetical protein LOC496255 ... 47 0.002 gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neo... 47 0.002 gi|67465559|ref|XP_648952.1| Rab family GTPase [Entamoeba histol... 47 0.002 gi|154417550|ref|XP_001581795.1| Ras family protein [Trichomonas... 47 0.002 gi|145504913|ref|XP_001438423.1| hypothetical protein GSPATT0000... 47 0.002 gi|123410458|ref|XP_001303710.1| small GTP-binding protein, puta... 47 0.002 gi|50082731|gb|AAT70060.1| Rab GTPase [Euplotes octocarinatus] 47 0.002 gi|145535658|ref|XP_001453562.1| hypothetical protein GSPATT0001... 47 0.002 gi|72384491|gb|AAZ67607.1| 80A08_22 [Brassica rapa subsp. pekine... 47 0.002 gi|123488927|ref|XP_001325272.1| small GTP-binding protein, puta... 47 0.002 gi|47223036|emb|CAG07123.1| unnamed protein product [Tetraodon n... 47 0.002 gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus] 47 0.002 gi|156388137|ref|XP_001634558.1| predicted protein [Nematostella... 47 0.002 gi|145501222|ref|XP_001436593.1| hypothetical protein GSPATT0003... 47 0.002 gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Pha... 47 0.003 gi|116207496|ref|XP_001229557.1| conserved hypothetical protein ... 47 0.003 gi|73962207|ref|XP_850610.1| PREDICTED: similar to Ras-related p... 47 0.003 gi|19880892|gb|AAM00540.1|AF458973_1 YPT53 [Saccharomyces cerevi... 47 0.003 gi|116004109|ref|NP_001070412.1| RAB31, member RAS oncogene fami... 47 0.003 gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Asp... 47 0.003 gi|115472201|ref|NP_001059699.1| Os07g0496000 [Oryza sativa (jap... 47 0.003 gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlam... 47 0.003 gi|123478215|ref|XP_001322271.1| small GTP-binding protein, puta... 47 0.003 gi|123456592|ref|XP_001316030.1| small GTP-binding protein, puta... 47 0.003 gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza ... 47 0.003 gi|115478587|ref|NP_001062887.1| Os09g0327100 [Oryza sativa (jap... 47 0.003 gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichod... 47 0.003 gi|123975020|ref|XP_001330169.1| small GTP-binding protein, puta... 47 0.003 gi|118086786|ref|XP_428301.2| PREDICTED: similar to RAB31, membe... 47 0.003 gi|145529147|ref|XP_001450362.1| hypothetical protein GSPATT0001... 46 0.003 gi|74222919|dbj|BAE42304.1| unnamed protein product [Mus musculus] 46 0.003 gi|46402217|ref|NP_997114.1| ADP-ribosylation-like factor 12 pro... 46 0.003 gi|148684160|gb|EDL16107.1| ADP-ribosylation factor-like 5C, iso... 46 0.003 gi|62900806|sp|Q6GQP4|RAB31_RAT Ras-related protein Rab-31 (GTP-... 46 0.003 gi|77404176|ref|NP_659562.2| RAB31, member RAS oncogene family [... 46 0.003 gi|147788245|emb|CAN75965.1| hypothetical protein [Vitis vinifera] 46 0.003 gi|154285758|ref|XP_001543674.1| conserved hypothetical protein ... 46 0.003 gi|157338312|emb|CAO39356.1| unnamed protein product [Vitis vini... 46 0.003 gi|19526850|ref|NP_598446.1| Rab31-like [Mus musculus] >gnl|BL_O... 46 0.003 gi|74140181|dbj|BAE33804.1| unnamed protein product [Mus musculu... 46 0.003 gi|123419727|ref|XP_001305617.1| small GTP-binding protein, puta... 46 0.003 gi|145357850|ref|NP_196588.3| AtRABH1e (Arabidopsis Rab GTPase h... 46 0.003 gi|123448393|ref|XP_001312927.1| small GTP-binding protein, puta... 46 0.003 gi|50082743|gb|AAT70066.1| Rab GTPase [Euplotes octocarinatus] 46 0.003 gi|123501745|ref|XP_001328143.1| small GTP-binding protein, puta... 46 0.003 gi|91081205|ref|XP_975613.1| PREDICTED: similar to Ras-related p... 46 0.003 gi|113205638|ref|NP_001037909.1| novel protein similar to mouse ... 46 0.003 gi|50082725|gb|AAT70057.1| Rab GTPase [Euplotes octocarinatus] 46 0.003 gi|18266069|gb|AAL67440.1|AF462270_1 Rab GTPase [Euplotes octoca... 46 0.003 gi|148225035|ref|NP_001080878.1| hypothetical protein LOC380572 ... 46 0.003 gi|50604023|gb|AAH78039.1| LOC446243 protein [Xenopus laevis] 46 0.003 gi|67678249|gb|AAH97668.1| LOC446243 protein [Xenopus laevis] 46 0.003 gi|157358689|emb|CAO66374.1| unnamed protein product [Vitis vini... 46 0.003 gi|145488520|ref|XP_001430264.1| hypothetical protein GSPATT0003... 46 0.003 gi|50082729|gb|AAT70059.1| Rab GTPase [Euplotes octocarinatus] 46 0.003 gi|50082723|gb|AAT70056.1| Rab GTPase [Euplotes octocarinatus] 46 0.003 gi|157331739|emb|CAO66868.1| unnamed protein product [Vitis vini... 46 0.003 gi|15227173|ref|NP_179816.1| AtRABH1d (Arabidopsis Rab GTPase ho... 46 0.003 gi|50082751|gb|AAT70070.1| Rab GTPase [Euplotes octocarinatus] 46 0.004 gi|145610591|ref|XP_368165.2| hypothetical protein MGG_01079 [Ma... 46 0.004 gi|117422554|gb|ABK34900.1| Rbj-like protein [Blastocladiella em... 46 0.004 gi|149244756|ref|XP_001526921.1| conserved hypothetical protein ... 46 0.004 gi|71651576|ref|XP_814463.1| small GTP-binding protein RAB6 [Try... 46 0.004 gi|50082749|gb|AAT70069.1| Rab GTPase [Euplotes octocarinatus] 46 0.004 gi|50082747|gb|AAT70068.1| Rab GTPase [Euplotes octocarinatus] 46 0.004 gi|50082741|gb|AAT70065.1| Rab GTPase [Euplotes octocarinatus] 46 0.004 gi|15234020|ref|NP_193615.1| AtRABA1d/AtRab11B/AthSGBP (Arabidop... 46 0.004 gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (jap... 46 0.004 gi|68480210|ref|XP_715915.1| putative rab family GTP-binding pro... 46 0.004 gi|67479365|ref|XP_655064.1| Rab family GTPase [Entamoeba histol... 46 0.004 gi|66472490|ref|NP_001018466.1| hypothetical protein LOC553657 [... 46 0.004 gi|145549438|ref|XP_001460398.1| hypothetical protein GSPATT0000... 46 0.004 gi|154420053|ref|XP_001583042.1| small GTP-binding protein, puta... 46 0.004 gi|50082745|gb|AAT70067.1| Rab GTPase [Euplotes octocarinatus] 46 0.004 gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346... 46 0.004 gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097... 46 0.004 gi|157128524|ref|XP_001661468.1| low-Mr GTP-binding protein Rab3... 46 0.004 gi|115742033|ref|XP_001177439.1| PREDICTED: similar to RAB13, me... 46 0.004 gi|50082735|gb|AAT70062.1| Rab GTPase [Euplotes octocarinatus] 46 0.004 gi|45191035|ref|NP_985289.1| AER434Cp [Ashbya gossypii ATCC 1089... 46 0.004 gi|126341940|ref|XP_001364067.1| PREDICTED: similar to ADP-ribos... 46 0.004 gi|146414423|ref|XP_001483182.1| conserved hypothetical protein ... 46 0.004 gi|154421786|ref|XP_001583906.1| small GTP-binding protein, puta... 46 0.005 gi|118368628|ref|XP_001017520.1| small GTP-binding protein domai... 46 0.005 gi|71422308|ref|XP_812094.1| ADP-ribosylation factor [Trypanosom... 46 0.005 gi|118371014|ref|XP_001018707.1| Ras family protein [Tetrahymena... 46 0.005 gi|146182464|ref|XP_001024641.2| Ras family protein [Tetrahymena... 46 0.005 gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica] 46 0.005 gi|119573630|gb|EAW53245.1| hCG1996054, isoform CRA_d [Homo sapi... 46 0.005 gi|2618480|dbj|BAA23369.1| dynein light intermediate chain 53/55... 46 0.005 gi|119188583|ref|XP_001244898.1| conserved hypothetical protein ... 46 0.005 gi|2618484|dbj|BAA23371.1| dynein light intermediate chain 53/55... 45 0.005 gi|15224916|ref|NP_181989.1| RAB6; GTP binding [Arabidopsis thal... 45 0.005 gi|154421511|ref|XP_001583769.1| Ras family protein [Trichomonas... 45 0.005 gi|123485660|ref|XP_001324545.1| small GTP-binding protein, puta... 45 0.005 gi|71424628|ref|XP_812858.1| ADP-ribosylation factor [Trypanosom... 45 0.005 gi|50310109|ref|XP_455068.1| unnamed protein product [Kluyveromy... 45 0.005 gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus... 45 0.005 gi|145229443|ref|XP_001389030.1| hypothetical protein An01g06060... 45 0.005 gi|31200881|ref|XP_309388.1| AGAP011254-PA [Anopheles gambiae st... 45 0.005 gi|118722332|ref|NP_001073128.1| hypothetical protein LOC780839 ... 45 0.005 gi|157344707|emb|CAO70462.1| unnamed protein product [Vitis vini... 45 0.005 gi|91083747|ref|XP_971281.1| PREDICTED: similar to CG7197-PA [Tr... 45 0.005 gi|121715562|ref|XP_001275390.1| ADP-ribosylation factor, putati... 45 0.005 gi|119481083|ref|XP_001260570.1| ADP-ribosylation factor, putati... 45 0.005 gi|146322910|ref|XP_755431.2| ADP-ribosylation factor, putative ... 45 0.005 gi|145231919|ref|XP_001399428.1| hypothetical protein An02g02880... 45 0.005 gi|71033513|ref|XP_766398.1| hypothetical protein TP01_0877 [The... 45 0.005 gi|126645710|ref|XP_001388049.1| Rab11, putative [Cryptosporidiu... 45 0.005 gi|157749875|ref|XP_001678651.1| Hypothetical protein CBG00634 [... 45 0.006 gi|148224120|ref|NP_001079868.1| hypothetical protein LOC379558 ... 45 0.006 gi|2618482|dbj|BAA23370.1| dynein light intermediate chain 53/55... 45 0.006 gi|15232477|ref|NP_188124.1| AtRABA1g (Arabidopsis Rab GTPase ho... 45 0.006 gi|149632570|ref|XP_001509653.1| PREDICTED: similar to small GTP... 45 0.006 gi|49523100|gb|AAH75129.1| LOC443720 protein [Xenopus laevis] 45 0.006 gi|19114161|ref|NP_593249.1| GTPase Ryh1 [Schizosaccharomyces po... 45 0.006 gi|2618478|dbj|BAA23368.1| dynein light intermediate chain 53/55... 45 0.006 gi|123468958|ref|XP_001317694.1| small GTP-binding protein, puta... 45 0.006 gi|74831478|emb|CAI39313.1| rab_C20 [Paramecium tetraurelia] 45 0.006 gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aes... 45 0.006 gi|145538518|ref|XP_001454959.1| hypothetical protein GSPATT0002... 45 0.006 gi|145540924|ref|XP_001456151.1| hypothetical protein GSPATT0002... 45 0.006 gi|118396092|ref|XP_001030389.1| Ras family protein [Tetrahymena... 45 0.006 gi|67479443|ref|XP_655103.1| Rab family GTPase [Entamoeba histol... 45 0.006 gi|118348502|ref|XP_001007726.1| Ras family protein [Tetrahymena... 45 0.006 gi|55741936|ref|NP_001006744.1| ADP-ribosylation factor-like 8 [... 45 0.006 gi|159113300|ref|XP_001706877.1| RabD [Giardia lamblia ATCC 5080... 45 0.006 gi|154272211|ref|XP_001536958.1| ADP-ribosylation factor [Ajello... 45 0.006 gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene fami... 45 0.007 gi|126321829|ref|XP_001364776.1| PREDICTED: similar to RAB12, me... 45 0.007 gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum] >g... 45 0.007 gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein ... 45 0.007 gi|74831371|emb|CAI39291.1| rab_C69 [Paramecium tetraurelia] 45 0.007 gi|84998352|ref|XP_953897.1| Rab GTPAse [Theileria annulata stra... 45 0.007 gi|56756457|gb|AAW26401.1| SJCHGC06657 protein [Schistosoma japo... 45 0.007 gi|72013796|ref|XP_786497.1| PREDICTED: similar to small GTP-bin... 45 0.007 gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa (jap... 45 0.007 gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza... 45 0.007 gi|74834283|emb|CAI44504.1| rab_A74 [Paramecium tetraurelia] 45 0.007 gi|51010979|ref|NP_001003449.1| hypothetical protein LOC445055 [... 45 0.007 gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase ho... 45 0.007 gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding pr... 45 0.007 gi|46111195|ref|XP_382655.1| conserved hypothetical protein [Gib... 45 0.007 gi|50082753|gb|AAT70071.1| Rab GTPase [Euplotes octocarinatus] 45 0.007 gi|126729792|ref|ZP_01745605.1| hypothetical protein SSE37_04940... 45 0.007 gi|66825191|ref|XP_645950.1| Rab GTPase [Dictyostelium discoideu... 45 0.007 gi|109089771|ref|XP_001099050.1| PREDICTED: ADP-ribosylation fac... 45 0.007 gi|15242483|ref|NP_199387.1| AtRABA1c (Arabidopsis Rab GTPase ho... 45 0.007 gi|6324236|ref|NP_014306.1| GTPase, similar to Ypt51p and Ypt52p... 45 0.007 gi|54400690|ref|NP_001006094.1| RAB34, member RAS oncogene famil... 45 0.007 gi|145549235|ref|XP_001460297.1| hypothetical protein GSPATT0002... 45 0.007 gi|126341503|ref|XP_001377173.1| PREDICTED: hypothetical protein... 45 0.008 gi|19074619|ref|NP_586125.1| ADP RIBOSYLATION FACTOR 1 [Encephal... 45 0.008 gi|123480122|ref|XP_001323216.1| small GTP-binding protein, puta... 45 0.008 gi|124359616|gb|ABD32281.2| Ras GTPase; Sigma-54 factor, interac... 45 0.008 gi|125981067|ref|XP_001354540.1| GA16152-PA [Drosophila pseudoob... 45 0.008 gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa] 45 0.008 gi|156121229|ref|NP_001095762.1| hypothetical protein LOC615804 ... 45 0.008 gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspe... 45 0.008 gi|6320869|ref|NP_010948.1| GTPase of the Ypt/Rab family, very s... 45 0.008 gi|50557336|ref|XP_506076.1| hypothetical protein [Yarrowia lipo... 45 0.008 gi|623586|gb|AAA74117.1| putative 45 0.008 gi|123976003|ref|XP_001314415.1| small GTP-binding protein, puta... 45 0.008 gi|115384596|ref|XP_001208845.1| ADP-ribosylation factor 1 [Aspe... 45 0.008 gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involut... 45 0.008 gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus] 45 0.008 gi|77454906|gb|ABA86262.1| CG7197 [Drosophila melanogaster] >gnl... 45 0.008 gi|24660781|ref|NP_648201.1| CG7197 CG7197-PA [Drosophila melano... 45 0.008 gi|114642979|ref|XP_522320.2| PREDICTED: similar to novel Ras fa... 45 0.008 gi|123400053|ref|XP_001301591.1| small GTP-binding protein, puta... 45 0.009 gi|126274541|ref|XP_001387566.1| predicted protein [Pichia stipi... 45 0.009 gi|17559536|ref|NP_507084.1| F11A5.4 [Caenorhabditis elegans] >g... 45 0.009 gi|123406672|ref|XP_001302832.1| Ras family protein [Trichomonas... 45 0.009 gi|157137269|ref|XP_001663965.1| adp-ribosylation factor, arf [A... 45 0.009 gi|145349021|ref|XP_001418939.1| predicted protein [Ostreococcus... 45 0.009 gi|50082737|gb|AAT70063.1| Rab GTPase [Euplotes octocarinatus] 45 0.009 gi|91089681|ref|XP_974614.1| PREDICTED: similar to CG6601-PA [Tr... 45 0.009 gi|145537620|ref|XP_001454521.1| hypothetical protein GSPATT0002... 45 0.009 gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis] >gnl|BL_O... 45 0.009 gi|3024504|sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B >gnl... 45 0.009 gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Dan... 45 0.009 gi|157343673|emb|CAO68179.1| unnamed protein product [Vitis vini... 45 0.009 gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HO... 45 0.009 gi|56206012|emb|CAI24328.1| RAB34, member of RAS oncogene family... 45 0.009 gi|114051368|ref|NP_001040368.1| Rab7 [Bombyx mori] >gnl|BL_ORD_... 45 0.009 gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histoly... 45 0.009 gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] 45 0.009 gi|145501753|ref|XP_001436857.1| hypothetical protein GSPATT0003... 45 0.009 gi|74831248|emb|CAI39270.1| rab_B74 [Paramecium tetraurelia] 45 0.010 gi|41054177|ref|NP_956118.1| ADP-ribosylation factor-like 8 [Dan... 45 0.010 gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa (jap... 45 0.010 gi|147782540|emb|CAN75036.1| hypothetical protein [Vitis vinifer... 45 0.010 gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis] 45 0.010 gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histol... 45 0.010 gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha gr... 45 0.010 gi|156838802|ref|XP_001643100.1| hypothetical protein Kpol_1029p... 45 0.010 gi|62859745|ref|NP_001017281.1| RAB18, member RAS oncogene famil... 45 0.010 gi|67539484|ref|XP_663516.1| hypothetical protein AN5912.2 [Aspe... 45 0.010 gi|72078956|ref|XP_782537.1| PREDICTED: similar to RAB2 isoform ... 45 0.010 gi|6321228|ref|NP_011305.1| GTPase of the Ypt/Rab family, very s... 45 0.010 gi|15233873|ref|NP_193578.1| AtRABA1e (Arabidopsis Rab GTPase ho... 45 0.010 gi|68482406|ref|XP_714835.1| putative rab family GTP-binding pro... 45 0.010 gi|83769845|dbj|BAE59980.1| unnamed protein product [Aspergillus... 45 0.010 gi|20141805|sp|Q64008|RAB34_MOUSE Ras-related protein Rab-34 (Ra... 45 0.011 gi|240986|gb|AAB20669.1| LMW G-protein [Mus sp.] >gnl|BL_ORD_ID|... 45 0.011 gi|31560774|ref|NP_258436.2| RAB34, member of RAS oncogene famil... 45 0.011 gi|74227833|dbj|BAE35734.1| unnamed protein product [Mus musculus] 45 0.011 gi|12963387|gb|AAK11241.1|AF327929_1 small GTPase Rah [Mus muscu... 45 0.011 gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypi... 45 0.011 gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypi... 45 0.011 gi|56206010|emb|CAI24326.1| RAB34, member of RAS oncogene family... 45 0.011 gi|56206013|emb|CAI24329.1| RAB34, member of RAS oncogene family... 45 0.011 gi|157354705|emb|CAO48023.1| unnamed protein product [Vitis vini... 45 0.011 gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon n... 45 0.011 gi|29841386|gb|AAP06418.1| similar to GenBank Accession Number M... 45 0.011 gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] 45 0.011 >gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melanogaster] gi|22946025|gb|AAF52775.2| CG3769-PA [Drosophila melanogaster] gi|66770889|gb|AAY54756.1| IP11319p [Drosophila melanogaster] Length = 368 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 368/368 (100%), Positives = 368/368 (100%) Query: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI Sbjct: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 Query: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE Sbjct: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE Sbjct: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 Query: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL Sbjct: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS Sbjct: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 Query: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR Sbjct: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 Query: 361 GKFESVQT 368 GKFESVQT Sbjct: 361 GKFESVQT 368 >gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoobscura] gi|54645577|gb|EAL34315.1| GA17674-PA [Drosophila pseudoobscura] Length = 368 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 294/368 (79%), Positives = 331/368 (89%), Gaps = 1/368 (0%) Query: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 MRLP IF S H+R+ +MF K TEGG++ATPSIQDIAGRLAEEQQRLRQLEAT+ PKERT+ Sbjct: 1 MRLPQIFLSWHKRILRMFEKSTEGGDNATPSIQDIAGRLAEEQQRLRQLEATSMPKERTL 60 Query: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 LVLGSKCVGK+TAINKFFDREEH TRPTLALEYSFGRRIGSG+SPQV+NVWELGSLDNA+ Sbjct: 61 LVLGSKCVGKSTAINKFFDREEHTTRPTLALEYSFGRRIGSGRSPQVINVWELGSLDNAD 120 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 QLLEVPMRTHGLQQLAV +M+DLSQPQRFWTDLECAYKGLR T+Q+++ ++TPELRE LE Sbjct: 121 QLLEVPMRTHGLQQLAVFIMVDLSQPQRFWTDLECAYKGLRVTSQELLARMTPELRETLE 180 Query: 181 QRTVERVGQQN-KDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGA 239 QRT+ERVG QN +D L+ LPFPV+IVGGKYDVF DP ++K CRCLRSMAH IGGA Sbjct: 181 QRTLERVGHQNKEDLGTLELLPFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGA 240 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 LLFYSQK+PKL+KVLRDTI H+GFGSP+HPFRSHV D NEPL +WFGTDSWS+IGDTGAQ Sbjct: 241 LLFYSQKVPKLSKVLRDTISHMGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDTGAQ 300 Query: 300 SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLL 359 SVERIGATFG+ VPQLQLEKQ + DPAKDPGFKE +IDE+R+QKNEELA +MRDVLL Sbjct: 301 SVERIGATFGVAVPQLQLEKQLQQVPQDPAKDPGFKESLIDEMRAQKNEELATIMRDVLL 360 Query: 360 RGKFESVQ 367 RGKFESVQ Sbjct: 361 RGKFESVQ 368 >gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 light intermediate chain [Gallus gallus] Length = 637 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 118/380 (31%), Positives = 194/380 (51%), Gaps = 24/380 (6%) Query: 2 RLPLIFHSLHQRLQKMFVKRTEGGES--ATPSIQDIAGRLAEEQQRLRQLEATTTPK--- 56 RLP L +RL +R G A P D +A ++ R+ + Sbjct: 256 RLPAELQ-LPERLAPFPWRRAAGPGRIAAMPKAGDTLWDIARDEVEKRENNGDDGKRVEV 314 Query: 57 -ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSP-QVMNVWELG 114 E+++L +GSK GKTT I + +REE +PTL LEY+FGRR +P + + WE+G Sbjct: 315 CEKSVLFMGSKNGGKTTIILRCLEREE-VPKPTLVLEYTFGRRARRHNAPKDIAHFWEIG 373 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM---EKV 171 + +L+ +P+ + ++ AV+L+LDLS+P W +E + R+ +++ EK Sbjct: 374 GGTSLLELIRIPITVNNIRSFAVVLVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKT 433 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 PE+ ++Q+ + + + D + +DP P P++I+G KYD+F FD +RK R LR Sbjct: 434 DPEVAAEIKQKMQNNLQRDHPDYDLVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRF 493 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 ++H G +L+F S+ L K R I HL FG +S VD ++PL I G DS S Sbjct: 494 VSHYYGASLVFTSKSEALLLKA-RALINHLAFGYDRS--KSVSVDHSKPLFIPAGLDSLS 550 Query: 292 KIGDTG--AQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEI 342 +IG ++ ++ A +E+ + EK L+++ DPA+ + E +D + Sbjct: 551 QIGPPPTSDSNIGKMRANTPLELWKKVFEKTFPPRSFSDLQDSKDPAQVSQYAEYEVDVM 610 Query: 343 RSQKNEELAGLMRDVLLRGK 362 R+QKN+E R+ K Sbjct: 611 RAQKNQEFEQYKRNASKSWK 630 >gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] Length = 358 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 323/323 (100%), Positives = 323/323 (100%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSP 105 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSP Sbjct: 36 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSP 95 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ Sbjct: 96 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 155 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT Sbjct: 156 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 215 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF Sbjct: 216 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 275 Query: 286 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQ 345 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQ Sbjct: 276 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQ 335 Query: 346 KNEELAGLMRDVLLRGKFESVQT 368 KNEELAGLMRDVLLRGKFESVQT Sbjct: 336 KNEELAGLMRDVLLRGKFESVQT 358 >gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light intermediate chain isoform 1 [Pan troglodytes] Length = 351 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 109/346 (31%), Positives = 176/346 (50%), Gaps = 17/346 (4%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++ E+++ +GSK GKTT I + DR+E +PTL Sbjct: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GRR +P + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 W +E + + +++ K + + Q+ + + + D E +DP P P++ Sbjct: 123 LWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDPFPVPLV 182 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 183 IIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGI 241 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QSVERIGATFGMEVPQLQLEK---- 319 +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 242 DKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPP 299 Query: 320 ---QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK++EL R K Sbjct: 300 KSINMLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain isoform 1 variant [Homo sapiens] Length = 351 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 174/346 (50%), Gaps = 17/346 (4%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++ E+++ +GSK GKTT I + DR+E +PTL Sbjct: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GRR +P + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 W +E + + +++ K + + Q+ + + + D E +DP P P++ Sbjct: 123 LWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLV 182 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K LR I L FG Sbjct: 183 IIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-LRGVINQLAFGI 241 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QSVERIGATFGMEVPQLQLEK---- 319 +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 242 DKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPP 299 Query: 320 ---QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 300 KSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 345 >gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein [Equus caballus] Length = 351 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 110/351 (31%), Positives = 178/351 (50%), Gaps = 23/351 (6%) Query: 29 TPSIQDIAGRLAEEQQRLRQLEATTTPK----ERTILVLGSKCVGKTTAINKFFDREEHA 84 PS D +A+ + R + + E+++ +GSK GKTT I + DR+E Sbjct: 1 MPS--DTLWEIAKAEVEKRGSNGSESDGVEIGEKSVFFIGSKNGGKTTIILRCLDRDE-P 57 Query: 85 TRPTLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 +PTLALEY++GR+ P + + WELG + L+ +P+ + L+ +++L+LDL Sbjct: 58 PKPTLALEYTYGRKAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLDL 117 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPL 200 S+P W +E + + +++ K+ + + Q+ + + + D E +DP Sbjct: 118 SKPNDLWPTMENLLQATKSHVNKVIMKLGKKNSKASSEMRQKIWSNMQKDHPDREIIDPF 177 Query: 201 PFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICH 260 P P++I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I Sbjct: 178 PIPLVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQ 236 Query: 261 LGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLE 318 L FG +S VD N+PL I G DS S+IG + ++ A ME+ + E Sbjct: 237 LAFGIDKS--KSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMELWKKVYE 294 Query: 319 K-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + LK+ DPA+DP + E +DE+R QK++EL R K Sbjct: 295 RLFPPKNTNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain isoform 1 [Homo sapiens] gi|19908231|gb|AAL99216.1| dynein 2 light intermediate chain [Homo sapiens] gi|119620696|gb|EAX00291.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_c [Homo sapiens] Length = 351 Score = 459 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 109/346 (31%), Positives = 173/346 (50%), Gaps = 17/346 (4%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++ E+ + +GSK GKTT I + DR+E +PTL Sbjct: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GRR +P + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 W +E + + +++ K + + Q+ + + + D E +DP P P++ Sbjct: 123 LWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLV 182 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 183 IIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGI 241 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QSVERIGATFGMEVPQLQLEK---- 319 +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 242 DKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPP 299 Query: 320 ---QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 300 KSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 345 >gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 2 [Canis familiaris] Length = 348 Score = 459 bits (1183), Expect = e-127, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 174/348 (50%), Gaps = 20/348 (5%) Query: 29 TPSIQDIAGRLAEEQQRLRQLEATTTP-KERTILVLGSKCVGKTTAINKFFDREEHATRP 87 PS + +A+ + R E E+++ +GSK GKTT I + DR+E +P Sbjct: 1 MPS--ETLWEIAKAEVEKRGSEGDGLEIGEKSVFFIGSKNGGKTTIILRCLDRDE-PPKP 57 Query: 88 TLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR P + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 58 TLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTFSIVLVLDLSKP 117 Query: 147 QRFWTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +M+ K + + Q+ + + + D E +DP P Sbjct: 118 NDLWPTMENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIP 177 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 178 LVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-VRGVINQLAF 236 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS S+IG + ++ A M++ + E+ Sbjct: 237 GIDKS--KSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVF 294 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 295 PPKSTNTLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWK 342 >gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] gi|81673547|gb|AAI09911.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] Length = 351 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 112/346 (32%), Positives = 174/346 (50%), Gaps = 17/346 (4%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++ E+++ +GSK GKTT I + DR+E +PTL Sbjct: 4 ETLWEIAKAEVEKRGSSENEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GRR P + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLR---DTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 W +E + + D + K + + Q+ + + + D E LDP P P++ Sbjct: 123 LWPTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKDHPDRELLDPFPIPLV 182 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 183 IIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGI 241 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK---- 319 +S VD N+PL I G DS S+IG + ++ A M++ + EK Sbjct: 242 NKS--KSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDLWKKVYEKLFPP 299 Query: 320 ---QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPAKDP + E +DE+R QK++EL R K Sbjct: 300 KSINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 387 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 109/345 (31%), Positives = 179/345 (51%), Gaps = 17/345 (4%) Query: 31 SIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLA 90 ++ +IA E+++ E+++ +GSK GKTT I + DR+E +PTLA Sbjct: 41 TLWEIAKAEVEKREISENGGDGAEVCEKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLA 99 Query: 91 LEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRF 149 LEY++GRR +P + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 100 LEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITNESLRTFSLVLVLDLSKPNDL 159 Query: 150 WTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVII 206 W +E + + +++ K + + + Q+ + + + D E +DP P P++I Sbjct: 160 WPTMESLLQVTKAHVDKLIMKLGKTSTKAASEMRQKMWSNMQKDHPDRELIDPFPIPLVI 219 Query: 207 VGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 +G KYD+F FD RK C+ LR ++H G +L+F S+ L K +R I L FG Sbjct: 220 IGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMFASKSEALLLK-IRGVINQLAFGID 278 Query: 267 AHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQSVERIGATFGMEVPQLQLEK----- 319 +S VD N+PL I G DS S+IG + ++ A ME+ + EK Sbjct: 279 KS--KSISVDQNKPLFIPAGLDSLSQIGSPPLSENEIGKLHAQTPMELWKKVYEKVFPPK 336 Query: 320 --QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 KET DPA+DP + E +DE+R+QK++EL ++ K Sbjct: 337 SANTSKETRDPARDPQYAESEVDEMRAQKDQELEQYKKNTSKSWK 381 >gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|20988526|gb|AAH30450.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|24659541|gb|AAH39070.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 351 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 111/346 (32%), Positives = 178/346 (51%), Gaps = 17/346 (4%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E+++ E+++ +GSK GKTT I + DR+E A +PTL Sbjct: 4 ETLWEIAKAEVEKRRSHGSEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDRDESA-KPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GR+ +P + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 W+ +E + + +++ K + + + QR V + + D E +DP P P++ Sbjct: 123 LWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDPFPIPLV 182 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 183 IIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGI 241 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK---- 319 +S VD N+PL I G DS +IG + ++ A ME+ + +K Sbjct: 242 DKS--KSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLFPP 299 Query: 320 ---QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 300 KSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWK 345 >gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|62822153|gb|AAY14702.1| unknown [Homo sapiens] gi|119620694|gb|EAX00289.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 352 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 109/347 (31%), Positives = 173/347 (49%), Gaps = 18/347 (5%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++ E+ + +GSK GKTT I + DR+E +PTL Sbjct: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GRR +P + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNK-DSEKLDPLPFPV 204 W +E + + +++ K + + Q+ + + + D E +DP P P+ Sbjct: 123 LWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPQDHELIDPFPVPL 182 Query: 205 IIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 +I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 183 VIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFG 241 Query: 265 SPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QSVERIGATFGMEVPQLQLEK--- 319 +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 242 IDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFP 299 Query: 320 ----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 300 PKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 346 >gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] Length = 350 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 109/346 (31%), Positives = 172/346 (49%), Gaps = 18/346 (5%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++ E+ + +GSK GKTT I + DR+E +PTL Sbjct: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GRR +P + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 W +E + + +++ K + + Q+ + + D E +DP P P++ Sbjct: 123 LWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIW-NYAEDHPDHELIDPFPVPLV 181 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 182 IIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGI 240 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QSVERIGATFGMEVPQLQLEK---- 319 +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 241 DKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPP 298 Query: 320 ---QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 299 KSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 344 >gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermediate chain isoform 2 [Pan troglodytes] Length = 334 Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats. Identities = 106/335 (31%), Positives = 174/335 (51%), Gaps = 17/335 (5%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++ E+++ +GSK GKTT I + DR+E +PTL Sbjct: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GRR +P + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 W +E + + +++ K + + Q+ + + + D E +DP P P++ Sbjct: 123 LWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDPFPVPLV 182 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 183 IIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGI 241 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QSVERIGATFGMEVPQLQLEK---- 319 +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 242 DKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPP 299 Query: 320 ---QKLKETTDPAKDPGFKELVIDEIRSQKNEELA 351 LK+ DPA+DP + E +DE+R QK++ L+ Sbjct: 300 KSINMLKDIKDPARDPQYAESEVDEMRIQKDQVLS 334 >gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chain isoform 3 [Homo sapiens] Length = 334 Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats. Identities = 105/331 (31%), Positives = 169/331 (51%), Gaps = 17/331 (5%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++ E+ + +GSK GKTT I + DR+E +PTL Sbjct: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GRR +P + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 W +E + + +++ K + + Q+ + + + D E +DP P P++ Sbjct: 123 LWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLV 182 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 183 IIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGI 241 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QSVERIGATFGMEVPQLQLEK---- 319 +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 242 DKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPP 299 Query: 320 ---QKLKETTDPAKDPGFKELVIDEIRSQKN 347 LK+ DPA+DP + E +DE+R QK+ Sbjct: 300 KSINTLKDIKDPARDPQYAENEVDEMRIQKD 330 >gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] Length = 318 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 103/304 (33%), Positives = 162/304 (53%), Gaps = 17/304 (5%) Query: 57 ERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSP-QVMNVWELGS 115 E+++ +GSK GKTT I + DR+E +PTLALEY++GRR +P + + WELG Sbjct: 15 EKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKDIAHFWELGG 73 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEK---VT 172 + L+ +P+ L+ +++L+LDLS+P W +E + + +++ K Sbjct: 74 GTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTN 133 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + + Q+ + + + D E +DP P P++I+G KYDVF F+ RK C+ LR + Sbjct: 134 AKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQDFESEKRKVICKTLRFV 193 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 AH G +L+F S+ L K LR I L FG +S VD N+PL I G DS+ + Sbjct: 194 AHYYGASLMFTSKSEALLLK-LRGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSFGQ 250 Query: 293 IGDTGA--QSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIR 343 IG + ++ A ME+ + EK LK+ DPA+DP + E +DE+R Sbjct: 251 IGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPARDPQYAENEVDEMR 310 Query: 344 SQKN 347 QK+ Sbjct: 311 IQKD 314 >gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 [Macaca mulatta] Length = 365 Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats. Identities = 101/350 (28%), Positives = 163/350 (46%), Gaps = 15/350 (4%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + ++ +IA E++ E+++ +GSK GKTT I + DR+ Sbjct: 13 PQKIIETLWEIAKAEVEKRGINGSEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDRDRPP 72 Query: 85 TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 G + + WELG + L+ VP+ + L+ +++L+LDLS Sbjct: 73 KMVLFLFFSFSFCHPGWSTPKDIAHFWELGGGTSLLDLISVPITSDTLRTFSLVLVLDLS 132 Query: 145 QPQRFWTDLECAYKGLRDTAQQMME---KVTPELREILEQRTVERVGQQNKDSEKLDPLP 201 +P W +E + + +M+ K P+ + Q+ + + + D E +DP P Sbjct: 133 KPNDLWPTMENLLQATKSHVDKMIMKLGKTNPKAASEMRQKIWNNMQKDHPDRELIDPFP 192 Query: 202 FPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHL 261 P++I+G KYD+F F+ RK C+ LR +AH G +L+F S+ L K +R I L Sbjct: 193 VPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQL 251 Query: 262 GFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QSVERIGATFGMEVPQLQLEK 319 FG +S VD N+PL I G DS+S+IG + ++ A ME+ + EK Sbjct: 252 AFGIDKS--KSICVDQNKPLLITAGLDSFSQIGSPPVPENDIGKLHAHSPMELWKKVYEK 309 Query: 320 -------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 310 LFPPKSINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 359 >gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115941395|ref|XP_001177851.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 363 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 184/350 (52%), Gaps = 16/350 (4%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTP--KERTILVLGSKCVGKTTAINKFFDREEHA 84 + SI DIA AE++ E E IL +GSK GKT+ I +F ++EE A Sbjct: 4 NKEKSIWDIAILEAEQKHATESKEQGGEAKGSENHILFIGSKNAGKTSIILRFLEKEE-A 62 Query: 85 TRPTLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 +PT+ALEY+FGRR + ++WELG QL E+P+ + ++++++DL Sbjct: 63 PKPTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDL 122 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPL 200 SQP W +E KG D +Q++ K P++++ +++R +R+G + D + LDP Sbjct: 123 SQPYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHPDRDMLDPF 182 Query: 201 PFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICH 260 P P++IVG KYDV+ FDP RK + LR +AH G AL F S K L ++ + H Sbjct: 183 PLPLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTKNLVSH 242 Query: 261 LGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQSVERIGATFGMEVPQ---- 314 L FG+ ++ +D N+P+ + FG DS +IG + R A +++ + Sbjct: 243 LAFGTTLS-LKTISIDPNKPISVPFGLDSLEQIGLPPVADDDLGRSNARTPLDLWKQAFT 301 Query: 315 -LQLEKQKLKETT-DPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 +K +K DP+KDP + E +D +R QKN+EL + R K Sbjct: 302 SYFPQKSTIKAIVEDPSKDPQYAEAAVDNMREQKNKELERYRKQAERRAK 351 >gi|157119433|ref|XP_001653379.1| conserved hypothetical protein [Aedes aegypti] gi|108883162|gb|EAT47387.1| conserved hypothetical protein [Aedes aegypti] Length = 347 Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 175/342 (51%), Positives = 236/342 (69%), Gaps = 10/342 (2%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 T +IQDIA +L E + T P ERTI VLGSK GK+T IN+F DR++ TRP Sbjct: 14 TTETIQDIAMKLVTEHMKQESS-LTGGPTERTIFVLGSKGAGKSTLINRFLDRDD-ITRP 71 Query: 88 TLALEYSFGRRIGSGKS--PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 TLALEYSFGRR SG+ + NVWELGSL N+ QL+EVP+R+HGL A +++LDLSQ Sbjct: 72 TLALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAAFAAVIVLDLSQ 131 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 P R WTDL+C GL+ Q + + +P+ +++R ++VG ++D L+ LPFPVI Sbjct: 132 PDRLWTDLQCILNGLK---QAISKNCSPKEVSEMQERMKQKVGLDHEDLNTLEILPFPVI 188 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 IVGGKYD F D I+KH CRCLRS++H IG AL+FY+ K L+K++RD + HLGFGS Sbjct: 189 IVGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRDAMNHLGFGS 248 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKET 325 P++PF++ +D N P+ + FG DSW KIG T S ERIG ++ ++PQ+ EK + + Sbjct: 249 PSNPFKATALDHNGPIVVPFGGDSWEKIGVTPTNS-ERIGMSYSAQIPQVGTEKVSIPD- 306 Query: 326 TDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQ 367 DPAKD GFKE VIDE+R+QK++EL L++D +R KFE+VQ Sbjct: 307 -DPAKDGGFKERVIDELRAQKDDELMRLLKDTEMRMKFEAVQ 347 >gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] Length = 341 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 104/327 (31%), Positives = 170/327 (51%), Gaps = 17/327 (5%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA ++++ E+++ +GSK GKTT I + DR+E A +PTL Sbjct: 4 ETLWEIAKAEVQKRRSHGSEGDGAEIGEKSLFFIGSKNGGKTTIILRCLDRDESA-KPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GR+ +P + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 W+ +E + + +++ K + + + QR V + + D E +DP P P++ Sbjct: 123 HWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDPFPIPLV 182 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 183 IIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGI 241 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK---- 319 +S VD N+PL I G DS +IG + ++ A ME+ + +K Sbjct: 242 DKS--KSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLFPP 299 Query: 320 ---QKLKETTDPAKDPGFKELVIDEIR 343 LK DPA+DP + E +DE+R Sbjct: 300 KSTGTLKAVQDPARDPQYAESEVDEMR 326 >gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae str. PEST] gi|116118470|gb|EAA13896.3| AGAP010165-PA [Anopheles gambiae str. PEST] Length = 339 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 175/342 (51%), Positives = 234/342 (68%), Gaps = 9/342 (2%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 T +IQDIA +L EQ R + TTP ERT+ VLGSK VGK+T IN+F DR++ RP Sbjct: 5 TTETIQDIAIKLVTEQLR-NESRLATTPTERTLFVLGSKGVGKSTLINRFLDRDD-VPRP 62 Query: 88 TLALEYSFGRRIGSGKS--PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 TLALEYSFGR+ SG+ + NVWELGSL N+ QL+E+P+R+HGLQ + I+MLDLSQ Sbjct: 63 TLALEYSFGRKTASGQGAQKNICNVWELGSLANSSQLIEMPIRSHGLQTFSCIVMLDLSQ 122 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 P R WTDLE GL+ + E +++ T +R+G+++ D L+ PFP++ Sbjct: 123 PDRLWTDLESVLNGLKQATAKH---AVAGQIEEMKELTAQRIGKEHPDLSTLELFPFPIV 179 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 IVGGKYD++ D IRKH CRCLRS+AH +G AL++YS K L+K++RDT+ HLGFGS Sbjct: 180 IVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRDTMNHLGFGS 239 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKET 325 P++PFR+ D + PL I FG DSW++IG T + S ERIG +F ++PQL + + Sbjct: 240 PSNPFRAASFDHSSPLAIPFGADSWARIGVTPSNS-ERIGLSFSTQIPQLPIGNGGIL-P 297 Query: 326 TDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQ 367 DPAKD GFKE IDE+RSQK+EEL +++D +R KFE VQ Sbjct: 298 DDPAKDAGFKEASIDELRSQKDEELMYVLKDTEIRMKFEVVQ 339 >gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibenclamide-sensitive voltage-gated potassium channel, partial [Ornithorhynchus anatinus] Length = 449 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 104/325 (32%), Positives = 160/325 (49%), Gaps = 15/325 (4%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEY 93 + +A + ++ E+++ +GSK GKTT I + DR+E A RPTLALEY Sbjct: 1 ETLWEIARAEVEKKEKPGGGDEGEKSVFFVGSKNGGKTTIILRCLDRDEPA-RPTLALEY 59 Query: 94 SFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTD 152 +FGRR +P + + WELG + L +P+ L+ A + LDLS+P W Sbjct: 60 TFGRRARGHNTPKDIAHFWELGGGTSLLDLARIPITADSLRTFATDIFLDLSRPSELWLT 119 Query: 153 LECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYD 212 E + +R + + + P R RT V + + D E +DP P P++I+G KYD Sbjct: 120 AEHLLRAVRTHVENLGQ---PGTRAAATPRTWSPVPEDHPDREFIDPFPIPLVIIGSKYD 176 Query: 213 VFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRS 272 VF D RK CR LR +AH G L+F + L K R I HL FG ++ Sbjct: 177 VFQNLDSEKRKVICRTLRFLAHHHGATLMFTGKSEALLLK-TRSVISHLAFGVGVDRSKA 235 Query: 273 HVVDFNEPLCIWFGTDSWSKIGDTGAQ--SVERIGATFGMEVPQLQLE-------KQKLK 323 +D N+PL I G DS+S+IG + + ++ +E+ + K K Sbjct: 236 LTLDQNKPLFIPAGLDSFSQIGPPPSAAGDIGKLRVQTPLELWKEVYNKAFPLQTKSDRK 295 Query: 324 ETTDPAKDPGFKELVIDEIRSQKNE 348 + DP +DP + E +D +R+QK++ Sbjct: 296 DLKDPGRDPQYAEREVDAMRAQKDQ 320 >gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella vectensis] gi|156226126|gb|EDO46938.1| predicted protein [Nematostella vectensis] Length = 366 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 107/356 (30%), Positives = 178/356 (50%), Gaps = 20/356 (5%) Query: 24 GGESATPSIQDIAG----RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD 79 G + + +I D+A L E ++ E++ +E I ++GSK GKT+ + +F D Sbjct: 2 GDKRSDKTIWDLAIEERDYLLNEAKKKGTQESSPHGEEAGIFLIGSKNAGKTSMVLRFLD 61 Query: 80 REEHATRPTLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 R+E +PT AL+Y+FGR+ V ++WELG +L+++P+ ++ L++I Sbjct: 62 RDE-VPKPTTALDYTFGRKAKGHNIAKDVGHIWELGGGTFLSKLIDIPINVDSVRGLSII 120 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT---PELREILEQRTVERVGQQNKDSE 195 + LDLS P W +E ++ ++M+++ P + L E+ G + D Sbjct: 121 IFLDLSLPNELWHTMETLLNQVKKRVHKVMDELAAKNPSAVQKLRNDAWEKFGTDHPDKS 180 Query: 196 KLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLR 255 ++P P P+ IVGGKYD++ FDP RK R LR +AH G L F+S K L R Sbjct: 181 FVEPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGRSR 240 Query: 256 DTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ--SVERIGATFGMEVP 313 I HL F + ++ VD N+P+ + G DS ++IG + R+ + ++ Sbjct: 241 GMIGHLLFHTSLG--KAIGVDHNKPIIVSAGQDSLAQIGAPPVASEDLGRLQSRNPYDLW 298 Query: 314 Q------LQLEKQKL-KETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + EK K + DP+KDP + E +D +R QK+EEL R + + Sbjct: 299 KAAYATFFPPEKSKQHSDREDPSKDPQYFEAAVDAMRKQKDEELDRYRRQAERKAR 354 >gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Danio rerio] gi|32766386|gb|AAH55198.1| Zgc:63673 [Danio rerio] Length = 358 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 116/355 (32%), Positives = 181/355 (50%), Gaps = 21/355 (5%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTT------PKERTILVLGSKCVGKTTAINKFF 78 + ++ ++ DIA + R E P +RT+ +GSK GKTT + +F Sbjct: 2 PKVSSDTLWDIAAAEVR-SRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 Query: 79 DREEHATRPTLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAV 137 +R+E A +PTLALEY+FGRR +P + ++WELG + L+++P+ + L+V Sbjct: 61 ERDETA-KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 Query: 138 ILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVG-QQNKDSEK 196 +L+LDLS+P W +E R+ +++ + ++ V RV + D E Sbjct: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 Query: 197 LDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRD 256 + P P P++IVG K+D+F FD RK C+ LR +AH G +L+F S K R Sbjct: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 Query: 257 TICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQ 314 I L FG+ +S D ++PL I G+DS S+IG A V+ + A ++ + Sbjct: 240 FINQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 Query: 315 LQLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 EK ++ KE DP KDP F E +ID IR+QK++EL R+ K Sbjct: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 >gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 99/351 (28%), Positives = 167/351 (47%), Gaps = 18/351 (5%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + ++ ++ D+A ++ ERT+ ++GSK GKT+ + K DR+E Sbjct: 2 PKISSDTLWDLAAAEVNSRESEDDYGERNVAVERTVFLMGSKAGGKTSILLKCLDRDE-P 60 Query: 85 TRPTLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 ++PTLALEY+FGRR +P + ++WELG L+++P+ + L+ L+VIL++DL Sbjct: 61 SKPTLALEYTFGRRARGHNTPKDIAHIWELGGGTFLSDLVQIPITSADLKFLSVILIVDL 120 Query: 144 SQPQRFWTDLECAYKGLRDTAQQ---MMEKVT---PELREILEQRTVERVGQ-QNKDSEK 196 S+P W E + + ++ M +K P ++ RV D E Sbjct: 121 SKPNELWGTTEKLLQVTQAHLEKAFSMAQKAQTAKPAATHQTATQSAARVLPADYPDREL 180 Query: 197 LDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRD 256 + P P++IVG KYD+F FD +K + LR +AH +L+ Q Sbjct: 181 ISAFPVPLLIVGSKYDIFQEFDSDKKKLIAQMLRFVAHSYAASLIVIHQXXXXXXXXXXX 240 Query: 257 TICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVER--IGATFGMEVPQ 314 ++ +D +PL I G+DS+S+IG A V+ + A ++ + Sbjct: 241 XXXXXX-XXXXXXXKTVSMDLTKPLIIPAGSDSFSQIGSPCAADVDIASLHARNPKDLWR 299 Query: 315 L------QLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLL 359 EK+ ++ DPAKDP + E ID +R+QK++EL R+ Sbjct: 300 KVCGCVFPPEKEHQQDLKDPAKDPQYSEPQIDAMRAQKDQELEQYKRNAAK 350 >gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chain [Rattus norvegicus] gi|50927372|gb|AAH79201.1| Dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 311 Score = 345 bits (885), Expect = 4e-93, Method: Composition-based stats. Identities = 78/245 (31%), Positives = 129/245 (52%), Gaps = 8/245 (3%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTP-KERTILVLGSKCVGKTTAINKFFDREEHATRPT 88 ++ +IA E++R + E+++ +GSK GKTT I + DR+E A +PT Sbjct: 4 ETLWEIAKAEV-EKRRCHGSDGDGMEIGEKSVFFIGSKNGGKTTIILRCLDRDEPA-KPT 61 Query: 89 LALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQ 147 LALEY++GR+ +P + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 62 LALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKPN 121 Query: 148 RFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFPV 204 W +E + + ++ K+ + + QR + + + D E +DP P P+ Sbjct: 122 DLWPTMENLLQATKSHVDKVTMKLGKANSKASSEMRQRMWSVMQKDHPDRELIDPFPIPL 181 Query: 205 IIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 +I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 182 VIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-MRGVINQLAFG 240 Query: 265 SPAHP 269 Sbjct: 241 IDKRY 245 >gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70877049|gb|EAN90434.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 422 Score = 344 bits (884), Expect = 4e-93, Method: Composition-based stats. Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 33/345 (9%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT----------RPTLALEYSF 95 L E T E +L++G+ GKT+ + + F ++ +PT AL+YSF Sbjct: 67 LNTRENQVTQTEVNVLIVGTSGGGKTSLLRRIFSGVNTSSSSVPKSFLRVKPTTALDYSF 126 Query: 96 GRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC 155 RR QV + WEL QL EV + + + + +++D S+P W + Sbjct: 127 VRRNDRH-IAQVAHFWELAQGMELSQLCEVVITPENVHTMVLAIVVDCSEPSTMWDTVVY 185 Query: 156 AYKGLRDTAQQMMEKVTPE---LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYD 212 K + ++ +K+ + + L R VG ++ D +L P +I+ K D Sbjct: 186 WMKRVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVGMEHPDLNRLRLSGVPTMIICNKLD 245 Query: 213 VFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRS 272 F+G + + K R +R +AH+ G L+F S LR + HL F S Sbjct: 246 AFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAEA---IKLRAVMNHLVFVSTFDLKHI 301 Query: 273 HVVDFNEPLCIWFGTDSWSKIG-----------DTGAQSVERIGATFGMEVPQLQLEKQK 321 + + + D+++ IG TG ++R A P Q E + Sbjct: 302 ELDPERGAVLVIPSADTFADIGEPAVSDMGGLQSTGDAELDRWKAPLDAMFPAKQSEGRM 361 Query: 322 LKE----TTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + + GF E +D +R QK +EL + R K Sbjct: 362 QNDSFLKRLYDTGENGFGEPTVDAVRKQKEDELEQYRKSAFKREK 406 >gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated family member (xbx-1) [Caenorhabditis elegans] gi|77799271|emb|CAB01645.2| Hypothetical protein F02D8.3 [Caenorhabditis elegans] Length = 370 Score = 344 bits (883), Expect = 6e-93, Method: Composition-based stats. Identities = 97/354 (27%), Positives = 167/354 (47%), Gaps = 34/354 (9%) Query: 31 SIQDIAG--------RLAEEQQRLRQLEATTTP---------KERTILVLGSKCVGKTTA 73 +I D+A R AE +Q+L T + E I+ G++ GK++ Sbjct: 2 NIWDLAKQKLVENKQRAAELKQKLDDENGTQSDNYLSEVRRRHESHIIFAGNRKSGKSSF 61 Query: 74 INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQ 133 + F +R+E + ++ LEY++ RR G + N+WELG +LL VP+ ++ Sbjct: 62 MLNFLERKED-LKDSVGLEYTYARRT-RGNVKDIANLWELGGGATVTELLSVPITMKNVE 119 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 ++IL+LD++ W +E +R + + E+ L+ L ++ R+ + + Sbjct: 120 ICSLILLLDMTNLDEMWITIEKTVDSVRRLVENL-ERQDINLQTRLAEKMRLRLEKYDDG 178 Query: 194 SEKL-DPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 S K+ +P P PV IV KYD F F+ R+H C+ LR +A+ G L+ +S +M + K Sbjct: 179 SLKMCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPK 238 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV 312 ++++ H FG+ + ++ D N+P+ + G DS IG A +GA+ + Sbjct: 239 LVKNMTSHFAFGTVCP--QGYMTDHNKPMFVKCGFDSLESIGIPPASD-NFMGASSPFNL 295 Query: 313 P---QLQLEKQKL-------KETTDPAKDPGFKELVIDEIRSQKNEELAGLMRD 356 + L QK + DP DP FKE ID + K +EL +R Sbjct: 296 WRESFISLWPQKTGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKELKNHIRS 349 >gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 light intermediate chain [Apis mellifera] Length = 345 Score = 342 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 109/344 (31%), Positives = 196/344 (56%), Gaps = 24/344 (6%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 +++ +++DIA R E+++ R+ T ER+I+++GSK VGKTT +++F +++E A Sbjct: 3 DQNSEENVRDIALRFCLEEEQRRKTNPNET-HERSIIIVGSKRVGKTTIVHRFLEKDE-A 60 Query: 85 TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMR----THGLQQLAVILM 140 +PT+A++YSFGR+ G +++VWE+G L ++ L+ M TH + ++++ Sbjct: 61 PKPTIAMDYSFGRKAGKSLIKNIVHVWEVGHLTSS--LVSAAMTGSSLTHSPHHVTILVI 118 Query: 141 LDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK-LDP 199 LDLSQP+ WT E A +R+ + + +I+++ +R+ ++ K EK +DP Sbjct: 119 LDLSQPEILWTTFEEALSVVRNAMKMSYDD------KIIQELKKQRIKERKKIVEKEIDP 172 Query: 200 LPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIC 259 P + +GGKYD F D ++ + LR++AH++G +L ++S K L + ++D + Sbjct: 173 FPMRLCFIGGKYDQFKDLDLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIKDLLS 232 Query: 260 HLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS-----VERIGATFGMEVPQ 314 + GFG+ + DF +PL I GTDS+S I Q+ ++ I + +PQ Sbjct: 233 YYGFGTQFSDIK--CTDFEKPLAISAGTDSFSSIDLQFPQTRPSAMLDTIKQIYVTHIPQ 290 Query: 315 LQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 + + E DP+ DP F E +ID +R+Q+ EE+ L+ D+L Sbjct: 291 ESRSNEIILE--DPSNDPNFNEPIIDRLRTQREEEINILLHDML 332 >gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00000012631 [Nasonia vitripennis] Length = 357 Score = 324 bits (832), Expect = 5e-87, Method: Composition-based stats. Identities = 108/347 (31%), Positives = 180/347 (51%), Gaps = 27/347 (7%) Query: 31 SIQDIAGRLAEEQQRLRQLEATTTPKE---RTILVLGSKCVGKTTAINKFFDREEHATRP 87 + QD A LA + + T P+E +++++LGS+ VGKTT I +F ++E+ +P Sbjct: 6 TNQDNARELALQASIQEDTQRKTDPEESHEKSLIILGSREVGKTTMIYRFLEKEDT-PKP 64 Query: 88 TLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMR----THGLQQLAVILMLDL 143 TLA++YS+GR+ G V++VWE+G L A L+ MR +H V++MLDL Sbjct: 65 TLAMDYSYGRKAGKSLVKDVVHVWEVGHL--APSLISGSMRGCTLSHSAHHTTVLIMLDL 122 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTV----ERVGQQNKDSEKL-D 198 +P W LE +R MM EL L +R + ER +D + D Sbjct: 123 GKPDVLWNSLEECLVAVR---AAMMMSYQQELVHDLRERKIRYLRERAKPGTEDEPPVDD 179 Query: 199 PLPFPVIIVGGKYDVFSGFDP-IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDT 257 P P + ++GGKYD F ++ + LR+ AH++G L ++S K L + ++ Sbjct: 180 PFPMRLCLIGGKYDEFRELHSGDDKESIGQALRAAAHVLGAGLHYHSAKDSHLLRRTKEL 239 Query: 258 ICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG-----DTGAQSVERIGATFGMEV 312 + H GF ++ V D+++PL + G+DS+S I + A +++ I + Sbjct: 240 LSHYGF--KGQSTKASVTDYDKPLSVAAGSDSFSAIDLKISRNDYAVTLDEIKQIYVRRF 297 Query: 313 PQLQLEKQKLK-ETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 PQ+ + L + DPA DP F E ++D +R Q+ +E++ L+RD+L Sbjct: 298 PQVPKNQDVLPGDMDDPANDPNFNEPIVDRLRLQREQEISVLLRDML 344 >gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Trypanosoma brucei TREU927] gi|70835124|gb|EAN80626.1| dynein light intermediate chain, putative [Trypanosoma brucei] Length = 418 Score = 318 bits (817), Expect = 3e-85, Method: Composition-based stats. Identities = 82/350 (23%), Positives = 132/350 (37%), Gaps = 37/350 (10%) Query: 45 RLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD----------REEHATRPTLALEYS 94 L E E + V+G GKT+ I + + + +PT AL+Y Sbjct: 71 ALNTKENNLPQSEANLFVVGCSGAGKTSVIQRVCSAIGAGGNTSGKGKTKVKPTTALDYQ 130 Query: 95 FGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + R S Q ++ WEL QL EV + + + + +++D S P W L Sbjct: 131 YTTRSDRHVS-QTVHFWELAQGMELSQLCEVVITPENVHLMHIAIVVDFSDPSSMWDTLA 189 Query: 155 CAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKY 211 K + A ++++K+ + L R +G+ + D +++ P +IV K Sbjct: 190 YWLKRVDRRANEILQKMRAKGSNTPDKLHARAQRALGEGHPDLKRVRLSGLPTVIVCNKV 249 Query: 212 DVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFR 271 D F G K RCLR +AHL G L+F S LR + HL F +P + Sbjct: 250 DAFPG-PMEQMKTLTRCLRFIAHLYGAYLVFSSDADSA---KLRLLLNHLLFLTPFDARQ 305 Query: 272 SHVVDFNEPLCIWFGTDSWSKIGDTG---------------AQSVERIGATFGMEVPQL- 315 + + I D++ IGD ++R P Sbjct: 306 VELDVERGTILIMPENDTFVDIGDPPLCDGPSGGPVTQSTGDSELDRWKVPLDAMFPPKA 365 Query: 316 ---QLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + + + + + GF E ID IR QK+EEL + R K Sbjct: 366 GGGRAQSDAMLKRLYDMGEGGFGEPTIDTIRRQKDEELEQYRKSAARRDK 415 >gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] gi|39583371|emb|CAE66345.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] Length = 366 Score = 316 bits (811), Expect = 1e-84, Method: Composition-based stats. Identities = 92/354 (25%), Positives = 159/354 (44%), Gaps = 38/354 (10%) Query: 31 SIQDIAG--------RLAEEQQRLRQLEATTTP---------KERTILVLGSKCVGKTTA 73 +I D+A R AE +Q+L E I++ G++ + Sbjct: 2 NIWDLAKQKLVENKQRAAELEQKLDDENGAVNDNYLAEVRRRHESHIIIAGNRQI----I 57 Query: 74 INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQ 133 I+ F E + LE+++ RR G V N+WELG + +LL VP+ ++ Sbjct: 58 IHVEFSGAERRFE-RIGLEFTYARRT-RGNVKDVANLWELGGGSSVTELLSVPITAKNVE 115 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 ++I++LD++ W +E +R + + E+ L+ + +++ R+ + Sbjct: 116 TCSLIVLLDMTNLSEMWITIEKTVDTVRRLVENL-ERQDANLQTRMAEKSRLRLEKYESS 174 Query: 194 SEKL-DPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 S K+ P P P+ IV KYD F F+ R+H C+ LR +A+ G L+ YS +M + K Sbjct: 175 SLKMCAPCPLPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPK 234 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV 312 ++++ I H FG+ + ++ D N+P+ I G D+ IG +GA+ + Sbjct: 235 LVKNMISHFAFGTVCP--QGYITDHNKPMFIKCGFDNLEAIGIPPGSD-NFMGASSPFNL 291 Query: 313 P---QLQLEKQKL-------KETTDPAKDPGFKELVIDEIRSQKNEELAGLMRD 356 + L QK + DP DP FKE ID + K +EL +R Sbjct: 292 WRESFISLWPQKTGNVDVEDTKKQDPMIDPVFKEPSIDNLVEIKRKELENHIRS 345 >gi|154343515|ref|XP_001567703.1| dynein light intermediate chain, putative [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065035|emb|CAM43147.1| dynein light intermediate chain, putative [Leishmania braziliensis] Length = 428 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 83/348 (23%), Positives = 143/348 (41%), Gaps = 44/348 (12%) Query: 45 RLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA--------TRPTLALEYSFG 96 +A E ++V+G+ GKTT +++ + + + + T AL+YSF Sbjct: 78 TRNVKDAAVEQTEINLVVVGAPGSGKTTLLHRIYTSFQSSASGSCSKRVKATTALDYSFA 137 Query: 97 RRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECA 156 RR +P V + WE+ QLL+V + + + +++D S+ + E A Sbjct: 138 RRSERNVAP-VAHFWEIAQGMQFSQLLDVVVTPENVHAIVAAVVVDASE-EGLPVAWEAA 195 Query: 157 YKGLR-------DTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGG 209 +R D +Q+M K + E L R + VG ++ D +++ P ++V Sbjct: 196 TYWMRRIDQRVSDISQRMKAKGST-TPEKLLTRAQKAVGLEHPDLKRMRLSGVPTVLVVN 254 Query: 210 KYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 K D F G D K CR +R +AHL G ++F S++ + L + F +P P Sbjct: 255 KIDAFRG-DMQQLKLLCRSMRYLAHLYGAHVVFTSEQESVRWRALMNFT---LFQAPFDP 310 Query: 270 FRSHVVDFNEPLCIWFGTDSWSKIGDTG--------------AQSVERIGATFGMEVPQL 315 + + DS+ IGD ++R F P Sbjct: 311 KHLQTDPERGAVLLTADRDSFLDIGDPNMSRLGGGGSSASTGDAELDRWKVPFDDAFPPK 370 Query: 316 QLEKQKLKETTDP-------AKDPGFKELVIDEIRSQKNEELAGLMRD 356 +L ++ K DP + GF E +ID +R QK+EEL ++ Sbjct: 371 KLNEED-KVMDDPFIRRLYDTSEGGFGEPMIDTLRKQKDEELEQYRKN 417 >gi|146097038|ref|XP_001468017.1| dynein light intermediate chain [Leishmania infantum JPCM5] gi|134072383|emb|CAM71091.1| dynein light intermediate chain, putative [Leishmania infantum] Length = 424 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 87/378 (23%), Positives = 157/378 (41%), Gaps = 47/378 (12%) Query: 12 QRLQKMFVKRTEGGESA---TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 Q L + G ++ P+ +D+ + +A E +++++G+ Sbjct: 48 QELSETPTTAATGTSASIVIDPT-KDLW-----QNITRNIKDANVEQTETSLVMVGASGS 101 Query: 69 GKTTAINKFFDREEHA--------TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 GKTT +++ + + + + T AL+YSF RR +P V + WE+ Sbjct: 102 GKTTLLHRIYTSFQSSSSGSGPKRVKATTALDYSFARRSERNVAP-VAHFWEIAQGTQFS 160 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTP 173 QLL++ + + +A +++D S+ + E A LR D +Q+M K + Sbjct: 161 QLLDIVLTPENVHAVAAAVVVDASE-EGLPVSWETATYWLRRLDQRVSDISQRMKAKGST 219 Query: 174 ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA 233 +IL R + +G + D +++ P ++V K D F G D K CR +R +A Sbjct: 220 TPAKIL-TRAQKAIGLDHPDLKRMRLSGIPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLA 277 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 HL G ++F S++ + L + F +P P + + DS+ I Sbjct: 278 HLYGAHVVFTSEQESVRWRALMNFT---LFQAPFDPKYLQTDPERSAVLLTVDRDSFLDI 334 Query: 294 GDT-----------GAQSVERIGATFGMEVPQLQLEKQKLKE-----TTDPAKDPGFKEL 337 GD G ++R A F P +L + K+ + + GF + Sbjct: 335 GDPDVSRLGGSVSTGDAELDRWKAPFDEAFPPKKLNEDKVMDDPFIRRLYDTAEGGFGDP 394 Query: 338 VIDEIRSQKNEELAGLMR 355 VID +R QK+EEL + Sbjct: 395 VIDALRKQKDEELEQYRK 412 >gi|157874331|ref|XP_001685649.1| dynein light intermediate chain, putative [Leishmania major] gi|68128721|emb|CAJ08854.1| dynein light intermediate chain, putative [Leishmania major] Length = 425 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 88/379 (23%), Positives = 155/379 (40%), Gaps = 50/379 (13%) Query: 12 QRLQKMFVKRTEGGESA---TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 Q L + G ++ P+ +D+ + +A E +++V+G+ Sbjct: 48 QELSEAPTTAATGTSASIVIDPT-KDLW-----QNITRNVKDANVEQTETSLVVVGASGS 101 Query: 69 GKTTAINKFFDREEHAT--------RPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 GKTT +++ + + + + T AL+YSF RR +P V + WE+ Sbjct: 102 GKTTLLHRIYTSFQSNSSGSGPKRVKATTALDYSFARRSERNVAP-VAHFWEIAQGTQFS 160 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTP 173 QLL++ + + + +++D S+ + E A LR D +Q+M K + Sbjct: 161 QLLDIVVTPENVHAVVAAVVVDASE-EGLPVAWETATYWLRRLDQRVSDISQRMKAKGST 219 Query: 174 ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA 233 +IL R + +G + D +++ P ++V K D F D K CR +R +A Sbjct: 220 TPAKIL-TRAQKAIGLDHPDLKRMRLSGVPTVLVINKIDAFR-RDMQQLKFLCRSMRYLA 277 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 HL G ++F S++ + L + F +P P + + DS+ I Sbjct: 278 HLYGAHVVFTSEQESVRWRALMNFT---LFQAPFDPKYLQTDPERSAVLLTVDRDSFLDI 334 Query: 294 GDT-----------GAQSVERIGATFGMEVPQLQLEKQKLKETTDP-------AKDPGFK 335 GD G ++R A F P +L ++ K DP + GF Sbjct: 335 GDPDVSRLGGSASTGDAELDRWKAPFDEAFPPKKLNEEG-KVVDDPFIRRLYDTSEGGFG 393 Query: 336 ELVIDEIRSQKNEELAGLM 354 + VID +R QK+EEL Sbjct: 394 DPVIDALRKQKDEELEQYR 412 >gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 3 [Canis familiaris] Length = 225 Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 15/222 (6%) Query: 153 LECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGG 209 +E + + +M+ K + + Q+ + + + D E +DP P++I+G Sbjct: 1 MENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIPLVIIGS 60 Query: 210 KYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 61 KYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-VRGVINQLAFGIDKS- 118 Query: 270 FRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-------Q 320 +S VD N+PL I G DS S+IG + ++ A M++ + E+ Sbjct: 119 -KSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVFPPKSTN 177 Query: 321 KLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 178 TLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWK 219 >gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermediate chain [Tetrahymena thermophila] Length = 474 Score = 283 bits (726), Expect = 9e-75, Method: Composition-based stats. Identities = 90/357 (25%), Positives = 165/357 (46%), Gaps = 47/357 (13%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 G+ + + A E+ L+Q A E+T++V+G K GKTT +N + ++ Sbjct: 18 GDRSNIDLWSHA-----EESELKQGFAKNL--EKTLVVIGDKGSGKTTFVNILKNMQQVD 70 Query: 85 TR--PTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLD 142 R PT+ L+Y + RR + + ++++ +ELG +++ +P+ + IL+LD Sbjct: 71 DRYIPTVGLDYQYVRRTNANR-KELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLD 129 Query: 143 LSQPQRFWTDLECAYKGLRDTAQ--QMMEKVTPELREILEQRTVERVGQQ-----NKDSE 195 LS+P + ++ +R + TPE + QR+ QQ + D Sbjct: 130 LSKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEEND---QRSNFEFAQQARFESHPDKN 186 Query: 196 KLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLR 255 ++ LP I++G KYD+F D RK R LR +AH+ G +L F S K L + +R Sbjct: 187 RVKILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSKNNDLFQNVR 246 Query: 256 DTICHLGFGSPA-HPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQ 314 + + FG ++S + P+ I D +K+G + +I + Sbjct: 247 SIMNNALFGKTLAQYYQSEHL---RPIEISLSKDELAKMG------LPQISGN----MTY 293 Query: 315 LQLEKQKLKET--------TDPAKDP-----GFKELVIDEIRSQKNEELAGLMRDVL 358 L+ K+ ++ET D ++DP F E ID IR++K++E+ + ++ + Sbjct: 294 LEAFKKVIQETFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKEFM 350 >gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] gi|89300006|gb|EAR97994.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] Length = 487 Score = 274 bits (701), Expect = 9e-72, Method: Composition-based stats. Identities = 89/370 (24%), Positives = 166/370 (44%), Gaps = 60/370 (16%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 G+ + + A E+ L+Q A E+T++V+G K GKTT +N + ++ Sbjct: 18 GDRSNIDLWSHA-----EESELKQGFAKNL--EKTLVVIGDKGSGKTTFVNILKNMQQVD 70 Query: 85 TR--PTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLD 142 R PT+ L+Y + RR + + ++++ +ELG +++ +P+ + IL+LD Sbjct: 71 DRYIPTVGLDYQYVRRTNANR-KELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLD 129 Query: 143 LSQPQRFWTDLECAYKGLRDTAQ--QMMEKVTPELREILEQRTVERVGQQ-----NKDSE 195 LS+P + ++ +R + TPE + QR+ QQ + D Sbjct: 130 LSKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEEND---QRSNFEFAQQARFESHPDKN 186 Query: 196 KLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYS----------- 244 ++ LP I++G KYD+F D RK R LR +AH+ G +L F S Sbjct: 187 RVKILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSNTQIHVLFNQ 246 Query: 245 --QKMPKLAKVLRDTICHLGFGSPA-HPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSV 301 ++ L + +R + + FG ++S + P+ I D +K+G + Sbjct: 247 HNKRNNDLFQNVRSIMNNALFGKTLAQYYQSEHL---RPIEISLSKDELAKMG------L 297 Query: 302 ERIGATFGMEVPQLQLEKQKLKET--------TDPAKDP-----GFKELVIDEIRSQKNE 348 +I + L+ K+ ++ET D ++DP F E ID IR++K++ Sbjct: 298 PQISGN----MTYLEAFKKVIQETFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDK 353 Query: 349 ELAGLMRDVL 358 E+ + ++ + Sbjct: 354 EMKAISKEFM 363 >gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 233 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 67/180 (37%), Positives = 93/180 (51%), Gaps = 12/180 (6%) Query: 192 KDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLA 251 KD E +DP P P++I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L Sbjct: 51 KDRELIDPFPIPLVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLL 110 Query: 252 KVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFG 309 K +R I L FG +S VD N+PL I G DS +IG + ++ A Sbjct: 111 K-IRGVINQLAFGIDKS--KSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSP 167 Query: 310 MEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 ME+ + +K LK DPA+DP + E +DE+R QK++EL R K Sbjct: 168 MELWKKVYDKLFPPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWK 227 >gi|123423641|ref|XP_001306418.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121887991|gb|EAX93488.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 286 Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 45/325 (13%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 + + D+ G++ E + + + +L +G + GK++ IN+FF R + +T Sbjct: 2 NPDNVVNDLWGQIIEHETEPIKPYGAG---DSHVLFVGGEQSGKSSLINQFFGRGD-STY 57 Query: 87 PTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 PTLAL Y +G +V++ WELG E L+ + V + DLS+ Sbjct: 58 PTLALAYQCCNLKVNG-KEKVLHFWELGGGVQMESLIPTIATEDTISGFVVFVCFDLSKS 116 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVII 206 LE +IL+ R ++ QN + + Sbjct: 117 ASIIESLE--------------------WLDILQMRLKDK---QNA-----------IFL 142 Query: 207 VGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 G YD+F P ++ + LRS+A L+F S KM L ++ I ++ + Sbjct: 143 AGTHYDLFESKSPQDKEIIVQGLRSIAAEHKVGLVFTSSKMETLINRFKNVIKYVCIANS 202 Query: 267 AHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETT 326 R VDF P+ + G D+ + T Q V + E+ + +K Sbjct: 203 N--VREKSVDFFNPVIVGPGADTELQ---TSGQEVADMMNKLSAEIAIEKRDKSS-NSLK 256 Query: 327 DPAKDPGFKELVIDEIRSQKNEELA 351 + DPG E ID + K EL Sbjct: 257 NVITDPGLAEEDIDSLYLAKKAELN 281 >gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70865007|gb|EAN81375.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 286 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 15/220 (6%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT----------RPTLALEYSF 95 L E T E +L++G+ GKT+ + + F ++ +PT AL+YSF Sbjct: 67 LNTRENQVTQTEVNVLIVGTSGSGKTSLLRRIFSGVNTSSSSVPKSFLRVKPTTALDYSF 126 Query: 96 GRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLEC 155 RR QV + WEL QL EV + + + + +++D S+P W + Sbjct: 127 VRRNDRH-IAQVAHFWELAQGMELSQLCEVVITPENVHTMVLAIVVDCSEPSTMWDTVVY 185 Query: 156 AYKGLRDTAQQMMEKVTPE---LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYD 212 K + ++ +K+ + + L R VG ++ D +L P +I+ K D Sbjct: 186 WMKRVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVGMEHPDLNRLRLSGVPTMIICNKLD 245 Query: 213 VFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 F+G + + K R +R +AH+ G L+F S + Sbjct: 246 AFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAEAIKLR 284 >gi|123415018|ref|XP_001304608.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121886072|gb|EAX91678.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 287 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 70/329 (21%), Positives = 120/329 (36%), Gaps = 50/329 (15%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 + P +DI G L E+ + + +E+ L +GS+ GK+ N+FF R + Sbjct: 2 NVDPK-RDIWGALINEKASSLK---SGVNEEKHFLFVGSEKSGKSCLQNQFFSRRDEPPE 57 Query: 87 PTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLAL Y + V++ WE+GS +QL+ + L+ + ++++P Sbjct: 58 -TLALSYQSA-SVRQDDKEVVLHFWEIGSGTKLDQLINTIVTKETLKDFNAFICFNVNKP 115 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVII 206 T + D A+ ++ K + + I Sbjct: 116 SSILTAI--------DWAENLISKFAYKSQSIY--------------------------F 141 Query: 207 VGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 +G YD F DP + +T + LR++A L+F S K LA + I L G Sbjct: 142 IGTFYDTFESNDPSQKINTVQGLRAIASKYHAGLIFTSYKDDNLANRFKGLIRQLALGET 201 Query: 267 AHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETT 326 P + P+ I +D G I + + ++ + + Sbjct: 202 --PTGEIITQHISPVFILPDSDKEC-----GGNE---IISPYVRQLKSAPPDDDAQAASK 251 Query: 327 DPAKDPGFKELVIDEIRSQKNEELAGLMR 355 D F E IDE+ K EL +R Sbjct: 252 DDPTSSKFAEKEIDELAETKERELEEKLR 280 >gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] gi|31376209|gb|AAO12154.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|33334344|gb|AAQ12259.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|47680185|gb|AAT37069.1| dynein 1b light intermediate chain [Chlamydomonas reinhardtii] gi|158276532|gb|EDP02304.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] Length = 427 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 77/363 (21%), Positives = 141/363 (38%), Gaps = 35/363 (9%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEH 83 A + I + E R+ + +GS+ GK+T +N+F Sbjct: 8 PGQAVKTPGSIWAKAIEHANEERKKPGADGRGDAFCYFVGSRAAGKSTLLNRFLYPTRAE 67 Query: 84 ATRPTLALEYSFGRRIGS--GKSPQVMNVWELGS-LDNAEQLL---EVPMRTHGLQQLAV 137 +P+ +EY++ R+ + + + ++WE+G + AE+++ ++ + + V Sbjct: 68 VPKPSEGIEYTYARKPAAFDHEKKDLAHIWEVGGSQEFAEEIVNSDQLFLTAKQVTTAVV 127 Query: 138 ILMLDLSQPQRFWTDL----ECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 ++++DLS P L E K L T ++ EK +L E L QR ++ N+D Sbjct: 128 VIVVDLSDPAGVLPTLLYWVEQVKKKLGSTYEKF-EKKGLQLPEQLRQRAKSKLYSANED 186 Query: 194 SEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYS--------- 244 + + ++I KYD F DP ++K R LR +AH G L + S Sbjct: 187 KDTVYHSGISLVIAATKYDAFKNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLHGASEGS 246 Query: 245 -QKMPKLAKVLRDTICHLGF-GSPAHPF-RSH-VVDFNEPLCIWFGTDSWSKIGDTGAQ- 299 + L + HL F G P + +D P+ + G D++ +G +Q Sbjct: 247 GAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSVGRPRSQG 306 Query: 300 ------SVERIGATFGMEVPQLQLEKQKLKETTDP--AKDPGFKELVIDEIRSQKNEELA 351 + F P EK+ +KE +D +R +K +L Sbjct: 307 EGTVAGGLAEWRELFEKMFPG-VREKEAKMSAKGAKFVIPEQYKEEEVDAVRQRKVTDLE 365 Query: 352 GLM 354 Sbjct: 366 NFR 368 >gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain isoform 2 [Homo sapiens] gi|16740931|gb|AAH16324.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|119620695|gb|EAX00290.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_b [Homo sapiens] Length = 201 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 5/167 (2%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++ E+ + +GSK GKTT I + DR+E +PTL Sbjct: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GRR +P + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLRDTAQQMME---KVTPELREILEQRTVERVGQQNK 192 W +E + + +++ K + + Q+ + + + Sbjct: 123 LWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHP 169 >gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] Length = 201 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 5/167 (2%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++ E+ + +GSK GKTT I + DR+E ++PTL Sbjct: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PSKPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GRR +P + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 63 ALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPND 122 Query: 149 FWTDLECAYKGLRDTAQQMME---KVTPELREILEQRTVERVGQQNK 192 W +E + + +++ K + + Q+ + + + Sbjct: 123 LWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHP 169 >gi|115690607|ref|XP_001202918.1| PREDICTED: similar to Dynein, cytoplasmic 2, light intermediate chain 1, partial [Strongylocentrotus purpuratus] gi|115733494|ref|XP_788980.2| PREDICTED: similar to Dynein, cytoplasmic 2, light intermediate chain 1, partial [Strongylocentrotus purpuratus] Length = 170 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 56/170 (32%), Positives = 92/170 (54%), Gaps = 7/170 (4%) Query: 29 TPSIQDIAGRLAEEQQRLRQLEATTTP--KERTILVLGSKCVGKTTAINKFFDREEHATR 86 SI DIA AE++ E E IL +GSK GKT+ I +F ++EE A + Sbjct: 2 EKSIWDIAILEAEQKHATESKEQGGEAKGSENHILFIGSKNAGKTSIILRFLEKEE-APK 60 Query: 87 PTLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 PT+ALEY+FGRR + ++WELG QL E+P+ + ++++++DLSQ Sbjct: 61 PTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDLSQ 120 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNK 192 P W +E KG D +Q++ K P++++ +++R +R+G + Sbjct: 121 PYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHP 170 >gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 374 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 82/326 (25%), Positives = 124/326 (38%), Gaps = 64/326 (19%) Query: 16 KMFVKRTEG-------GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 + R EG + PS + L+E R R + P +TILVLG Sbjct: 37 PVPQARNEGWGCGLLRYGAVRPSGPSTSSILSEVSTRSR----SKLPSGKTILVLGDNGS 92 Query: 69 GKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPM 127 GKTT + K EH + LEY + + NVW L ++ LL+ + Sbjct: 93 GKTTLMAK-LQGAEHGQKGR-GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAV 150 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQ----------MMEKVTPE 174 LQ VI ++D+S+P WT +E K LR+ + M +K+ E Sbjct: 151 SAESLQHTIVIFVVDMSRP---WTAMESLEKWAGVLREHIDKLKIPPEETRGMQQKIIKE 207 Query: 175 LREILE---------QRTVERVGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFD 218 +E +E QR GQ+N ++ L PV++V K D S + Sbjct: 208 FQEYVEPEEAYQGSSQRRGPSSGQENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLE 267 Query: 219 P----------IIRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA 267 I+ H R CL+ G AL++ S K K +L + H +G Sbjct: 268 KKRGYREEHFDFIQSHIRRFCLQ-----YGAALIYTSVKGEKNLDLLYKYLVHKMYG--F 320 Query: 268 HPFRSHVVDFNEPLCIWFGTDSWSKI 293 +V + + I G D+ KI Sbjct: 321 QLTTPALVVEKDAVFIPAGWDNEKKI 346 >gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein, partial [Gallus gallus] Length = 388 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 77/299 (25%), Positives = 117/299 (39%), Gaps = 57/299 (19%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L+E R R + P +TILVLG GKTT + K EH + LEY + Sbjct: 1 SSILSEVSTRSR----SKLPSGKTILVLGDNGSGKTTLMAK-LQGAEHGQKGR-GLEYLY 54 Query: 96 GRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + NVW L ++ LL+ + LQ VI ++D+S+P WT +E Sbjct: 55 LNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRP---WTVME 111 Query: 155 CAYKG---LRDTAQQ----------MMEKVTPELREILE---------QRTVERVGQQNK 192 K LR+ + M +K+ E +E +E QR GQ+N Sbjct: 112 SLEKWAGVLREHIDKLKIPPEEMRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQENA 171 Query: 193 -------DSEKLDPLPFPVIIVGGKYDVFSGFDP----------IIRKHTCR-CLRSMAH 234 ++ L PV++V K D S + I+ H R CL+ Sbjct: 172 SVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQ---- 227 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 G AL++ S K K +L + H +G +V + + I G D+ KI Sbjct: 228 -YGAALIYTSVKGEKNLDLLYKYLVHKMYG--FQLTTPALVVEKDAVFIPAGWDNEKKI 283 >gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT00019900001 [Paramecium tetraurelia strain d4-2] gi|124421326|emb|CAK86207.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 65/304 (21%), Positives = 129/304 (42%), Gaps = 19/304 (6%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV 107 Q+ + + + + G GK+T ++K + + L Y+ ++ V Sbjct: 12 QINVPQSQLQHSFVFCGQTQSGKSTIVSKLTS---QSIQEQAGLIYTQ-QKTNIIGYQAV 67 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS-QPQRFWTDLECAYKGLRD-TAQ 165 + +E+ +QLL +P+ QQ + IL++DLS P + +++ T + Sbjct: 68 LQYFEVSGQAF-KQLLTLPLNKQSYQQYSYILVIDLSDNPHEILNVCNTEIRYIKEETEK 126 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFS-GFDPIIRKH 224 ++ + + + + LE +++ + D ++ P P+IIVG KYD+FS D RK Sbjct: 127 KLQQSIDVDTFKQLELNIYDKI-MMHHDKNRIIPSYVPIIIVGWKYDLFSKNLDQESRKW 185 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 R LR +AH +L+F S + +L K + + D + LCI Sbjct: 186 ITRGLRYLAHSNNCSLVFGSNQDYQLVKQTLQY-------NVKPSAPIYQFDHLKQLCIT 238 Query: 285 FGTDSWSKIGDTGAQS--VERIGATFGMEVPQLQLEKQKLKETTDPAKD-PGFKELVIDE 341 +DS I + + ++ ++ + ++K K++ +D +KE ID Sbjct: 239 QLSDSIENINLPPSGNNPLDGFNKIIKDQIVAVVNNQKKKKQSKISEEDWDNYKEEKIDR 298 Query: 342 IRSQ 345 + Q Sbjct: 299 LIKQ 302 >gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Gallus gallus] gi|53126839|emb|CAG30989.1| hypothetical protein [Gallus gallus] Length = 488 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 76/309 (24%), Positives = 119/309 (38%), Gaps = 58/309 (18%) Query: 27 SATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 S Q++ L+E R R + P + ILV G GKTT + K EH Sbjct: 23 SEEEEGQNLWSSILSEVSTRSR----SKLPSGKNILVFGDDGSGKTTLMAKI-QGAEHGK 77 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + + Q NVW L + LL+ + LQ V+ + D+S Sbjct: 78 KGR-GLEYLYLNIHDEDRDDQTRCNVWILDGDLYNKGLLKFAVSAESLQDTIVVFVADMS 136 Query: 145 QPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE---------QR 182 +P WT +E K L++ ++ +K E +E +E QR Sbjct: 137 RP---WTVMESLQKWASVLQEHIDKLKIPPEEMRDMEQKFIKEFQEYVEPEEGYQGSPQR 193 Query: 183 TVERVGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHT 225 GQ+++ ++ L PV++V K D S + I+ H Sbjct: 194 RGPSSGQEDESVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHI 253 Query: 226 CR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 R CL+ G AL++ S K K +L I H +G + VV+ + + I Sbjct: 254 RRFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTYGFQFT-TPALVVEKD-AVFIP 306 Query: 285 FGTDSWSKI 293 G D+ KI Sbjct: 307 AGWDNEKKI 315 >gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT00009430001 [Paramecium tetraurelia strain d4-2] gi|124407696|emb|CAK73082.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 130/305 (42%), Gaps = 21/305 (6%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ- 106 Q+ + + + ++ G GK+T ++K ++ + + ++ + Q Sbjct: 12 QINVPQSQLQHSFVLCGQPQSGKSTIVSKLTSQQIQDQAGLI-----YAQQKTNIIGYQA 66 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS-QPQRFWTDLECAYKGLRD-TA 164 V+ +E+ +QLL +P+ QQ + +L++DLS P + +R+ T Sbjct: 67 VLQYFEISGQAF-KQLLTLPLNKQSYQQYSYVLVIDLSDNPHEILNVCNAEIRYIREETE 125 Query: 165 QQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFS-GFDPIIRK 223 +++ + + + + LE +++ + D ++ PL P+IIVG KYD+FS D RK Sbjct: 126 KKLQQSIDVDTFKQLELNIYDKI-MMHHDKNRIVPLYVPIIIVGWKYDLFSKNLDLESRK 184 Query: 224 HTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCI 283 R LR +AH +L+F S + + + + D + +CI Sbjct: 185 WITRGLRYLAHTNNCSLVFGSNQDYQFVRQTLQY-------HVKPTASIYQYDHLKQICI 237 Query: 284 WFGTDSWSKIGDTGAQS--VERIGATFGMEVPQLQLEKQKLKETTDPAKD-PGFKELVID 340 +DS I + + ++ ++ + ++K K++ +D +KE ID Sbjct: 238 TQLSDSIENINLPPSGNNPLDGFNKIIKDQIVAVVNNQKKKKQSKITEEDWNNYKEEKID 297 Query: 341 EIRSQ 345 + Q Sbjct: 298 RLIKQ 302 >gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin light chain A [Monodelphis domestica] Length = 520 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 121/312 (38%), Gaps = 55/312 (17%) Query: 24 GGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 G ++ Q++ L+E R R + P + +L+LG GKT+ I + R E Sbjct: 32 GDKAEEDDGQNLWSCILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGRIQGRPE 87 Query: 83 HATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 + A EY + + Q NVW L + LL+ M + L+ VIL++ Sbjct: 88 ECKKGRGA-EYLYLSVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMEANSLRDTLVILVV 146 Query: 142 DLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ----------- 190 D+S+P L+ +R+ ++ K+ PE + +EQ+ + + Sbjct: 147 DMSKPWTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLIRDFQEYVEPGEDFPASP 204 Query: 191 ------NKDSE-----------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRK 223 +D + L PV++V K D S + I+ Sbjct: 205 QRRSTLQEDKDDSVMLPLGADTLTYNLGVPVLVVCTKCDAISVLEKEHDYKDEHFDFIQS 264 Query: 224 HTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 H + CL+ G AL++ S K K ++ I +G P + VV+ + + Sbjct: 265 HIRKFCLQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYGFPF-KIPAVVVEKD-AVF 317 Query: 283 IWFGTDSWSKIG 294 I G D+ KIG Sbjct: 318 IPAGWDNDKKIG 329 >gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein light intermediate chain 2 [Monodelphis domestica] Length = 493 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 75/312 (24%), Positives = 117/312 (37%), Gaps = 63/312 (20%) Query: 27 SATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ L+E R R + P + ILV G GKTT + K EH+ Sbjct: 27 NEEDEGQNLWSSILSEVSTRSR----SKLPSGKNILVFGEDGSGKTTLLAK-LQGAEHSK 81 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + + NVW L + LL+ + LQ+ VI + D+S Sbjct: 82 KGR-GLEYLYLNIHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAETLQETLVIFVADMS 140 Query: 145 QPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVERVGQQNK--------- 192 +P WT +E K LR+ +M K+ PE +EQ+ V+ + + Sbjct: 141 RP---WTVMESLQKWASVLREHIDKM--KIPPEEMRDMEQKFVKDFQEYVEPEEGYQGSP 195 Query: 193 --------------------DSEKLDPLPFPVIIVGGKYDVFSGFDPI----------IR 222 D+ L PV++V K D S + I+ Sbjct: 196 QRRGPLASAQDGENVILPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQ 255 Query: 223 KHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPL 281 H + CL+ G AL++ S K K +L I H +G H +V + + Sbjct: 256 SHVRKFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKDAV 308 Query: 282 CIWFGTDSWSKI 293 I G D+ KI Sbjct: 309 FIPAGWDNEKKI 320 >gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Homo sapiens] Length = 492 Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 113/320 (35%), Gaps = 60/320 (18%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K + ++ +E Sbjct: 131 TLVIFVADMSRP---WTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEP 187 Query: 181 --------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI---- 220 QR V D+ L PV++V K D S + Sbjct: 188 EEGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYR 247 Query: 221 ------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 I+ H R CL+ G AL++ S K K +L I H +G H Sbjct: 248 DEHLDFIQSHLRRFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPA 300 Query: 274 VVDFNEPLCIWFGTDSWSKI 293 +V + + I G D+ KI Sbjct: 301 LVVEKDAVFIPAGWDNEKKI 320 >gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_a [Mus musculus] Length = 527 Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 114/320 (35%), Gaps = 60/320 (18%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 52 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 107 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 108 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 165 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K E ++ +E Sbjct: 166 TLVIFVADMSRP---WTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEP 222 Query: 181 --------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI---- 220 QR V D+ L PV++V K D S + Sbjct: 223 EEGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYR 282 Query: 221 ------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 I+ H R CL+ G AL++ S K K +L I H +G H Sbjct: 283 DEHLDFIQAHLRRFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPA 335 Query: 274 VVDFNEPLCIWFGTDSWSKI 293 +V + + I G D+ KI Sbjct: 336 LVVEKDAVFIPAGWDNEKKI 355 >gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Homo sapiens] gi|3287825|sp|O43237|DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|2665836|gb|AAB88513.1| dynein light intermediate chain 2 [Homo sapiens] gi|119603445|gb|EAW83039.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|119603446|gb|EAW83040.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|158256964|dbj|BAF84455.1| unnamed protein product [Homo sapiens] Length = 492 Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 113/320 (35%), Gaps = 60/320 (18%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K + ++ +E Sbjct: 131 TLVIFVADMSRP---WTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEP 187 Query: 181 --------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI---- 220 QR V D+ L PV++V K D S + Sbjct: 188 EEGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYR 247 Query: 221 ------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 I+ H R CL+ G AL++ S K K +L I H +G H Sbjct: 248 DEHLDFIQSHLRRFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPA 300 Query: 274 VVDFNEPLCIWFGTDSWSKI 293 +V + + I G D+ KI Sbjct: 301 LVVEKDAVFIPAGWDNEKKI 320 >gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|67970473|dbj|BAE01579.1| unnamed protein product [Macaca fascicularis] Length = 492 Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 114/320 (35%), Gaps = 60/320 (18%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P ++ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKSILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K + ++ +E Sbjct: 131 TLVIFVADMSRP---WTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEP 187 Query: 181 --------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI---- 220 QR V D+ L PV++V K D S + Sbjct: 188 EEGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYR 247 Query: 221 ------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 I+ H R CL+ G AL++ S K K +L I H +G H Sbjct: 248 DEHLDFIQSHLRRFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPA 300 Query: 274 VVDFNEPLCIWFGTDSWSKI 293 +V + + I G D+ KI Sbjct: 301 LVVEKDAVFIPAGWDNEKKI 320 >gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] gi|73919261|sp|Q9QXU8|DC1L1_RAT Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|6651427|gb|AAF22294.1|AF181992_1 dynein light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 67/315 (21%), Positives = 114/315 (36%), Gaps = 53/315 (16%) Query: 21 RTEGGESA--TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF 78 GG +A Q++ R+ E + P + +L+LG GKT+ I + Sbjct: 32 SGSGGPAAGDDEDGQNLWSRILREVS---TRSRSKLPTGKNVLLLGEDGAGKTSLIRRI- 87 Query: 79 DREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAV 137 E + LEY + + Q NVW L + LL+ + L+ V Sbjct: 88 QGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLV 146 Query: 138 ILMLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE------- 180 +L++D+S+P L+ +R+ ++ +K+ + +E +E Sbjct: 147 MLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPA 206 Query: 181 --QRTVERVGQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPI---------- 220 QR + DS L PV++V K D S + Sbjct: 207 SPQRRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFDF 266 Query: 221 IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 I+ H + CL+ G AL++ S K K ++ I +G VV + Sbjct: 267 IQSHIRKFCLQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKD 319 Query: 280 PLCIWFGTDSWSKIG 294 + I G D+ KIG Sbjct: 320 AVFIPAGWDNDKKIG 334 >gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light intermediate chain 2 isoform 3 [Bos taurus] Length = 492 Score = 157 bits (399), Expect = 7e-37, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 114/320 (35%), Gaps = 60/320 (18%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K + ++ +E Sbjct: 131 TLVIFVADMSRP---WTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYVEP 187 Query: 181 --------QRTVER-VGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFDPI---- 220 QR G + D+ L PV++V K D S + Sbjct: 188 EEGCQGSPQRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYR 247 Query: 221 ------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 I+ H R CL+ G AL++ S K K +L I H +G H Sbjct: 248 DEHFDFIQSHLRRFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPA 300 Query: 274 VVDFNEPLCIWFGTDSWSKI 293 +V E + I G D+ KI Sbjct: 301 LVVEKEAVFIPAGWDNEKKI 320 >gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 157 bits (399), Expect = 9e-37, Method: Composition-based stats. Identities = 69/316 (21%), Positives = 116/316 (36%), Gaps = 55/316 (17%) Query: 21 RTEGGESA--TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKF 77 GG +A Q++ L+E R R + P + +L+LG GKT+ I + Sbjct: 32 SGSGGPAAGDDEDGQNLWSCILSEVSTRSR----SKLPTGKNVLLLGEDGAGKTSLIRRI 87 Query: 78 FDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLA 136 E + LEY + + Q NVW L + LL+ + L+ Sbjct: 88 -QGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTL 145 Query: 137 VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE------ 180 V+L++D+S+P L+ +R+ ++ +K+ + +E +E Sbjct: 146 VMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFP 205 Query: 181 ---QRTVERVGQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPI--------- 220 QR + DS L PV++V K D S + Sbjct: 206 ASPQRRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEHFD 265 Query: 221 -IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFN 278 I+ H + CL+ G AL++ S K K ++ I +G VV Sbjct: 266 FIQSHIRKFCLQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEK 318 Query: 279 EPLCIWFGTDSWSKIG 294 + + I G D+ KIG Sbjct: 319 DAVFIPAGWDNDKKIG 334 >gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|55726458|emb|CAH89998.1| hypothetical protein [Pongo pygmaeus] Length = 492 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 72/319 (22%), Positives = 110/319 (34%), Gaps = 58/319 (18%) Query: 18 FVKRTEGGESATPS-IQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINK 76 G ++ Q + + E + P + ILV G GKTT + K Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVS---TRAGSKLPSGKNILVFGEDGSGKTTLMTK 73 Query: 77 FFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQL 135 EH + LEY + + NVW L + LL+ + L + Sbjct: 74 -LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPET 131 Query: 136 AVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE-- 180 VI + D+S+P WT +E K LR+ +M K + ++ +E Sbjct: 132 LVIFVADMSRP---WTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPE 188 Query: 181 -------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI----- 220 QR V D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 221 -----IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 I+ H R CL+ G AL++ S K K +L I H +G H + Sbjct: 249 EHLDFIQSHLRRFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPAL 301 Query: 275 VDFNEPLCIWFGTDSWSKI 293 V + + I G D+ KI Sbjct: 302 VVEKDAVFIPAGWDNEKKI 320 >gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 68/306 (22%), Positives = 112/306 (36%), Gaps = 53/306 (17%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVERV 187 L+ +R+ ++ +K+ + +E +E QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 215 Query: 188 GQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR-C 228 + DS L PV++V K D S + I+ H + C Sbjct: 216 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 LR G AL++ S K K ++ I +G VV + + I G D Sbjct: 276 LR-----YGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWD 328 Query: 289 SWSKIG 294 + KIG Sbjct: 329 NDKKIG 334 >gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|73919260|sp|Q8R1Q8|DC1L1_MOUSE Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|19484061|gb|AAH23347.1| Dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|74198263|dbj|BAE35301.1| unnamed protein product [Mus musculus] gi|148677352|gb|EDL09299.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] Length = 523 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 68/318 (21%), Positives = 116/318 (36%), Gaps = 59/318 (18%) Query: 21 RTEGGESA--TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKF 77 GG +A Q++ L+E R R + P + +L+LG GKT+ I + Sbjct: 32 SGSGGPAAGDDEDGQNLWSCILSEVSTRSR----SKLPTGKNVLLLGEDGAGKTSLIRRI 87 Query: 78 FDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLA 136 E + LEY + + Q NVW L + LL+ + L+ Sbjct: 88 -QGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTL 145 Query: 137 VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------ 190 V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ + + Sbjct: 146 VMLVVDMSKPWTALDSLQKWASVVREHVDKL--KIPPEEMKEMEQKLIRDFQEYVEPGED 203 Query: 191 ------------NKDSE-----------KLDPLPFPVIIVGGKYDVFSGFDPI------- 220 +D L PV++V K D S + Sbjct: 204 FPASPQRRTTGAQEDRGDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEH 263 Query: 221 ---IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 I+ H + CL+ G AL++ S K K ++ I +G VV Sbjct: 264 FDFIQSHIRKFCLQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVV 316 Query: 277 FNEPLCIWFGTDSWSKIG 294 + + I G D+ KIG Sbjct: 317 EKDAVFIPAGWDNDKKIG 334 >gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculus] gi|74183685|dbj|BAE24463.1| unnamed protein product [Mus musculus] gi|74190862|dbj|BAE28215.1| unnamed protein product [Mus musculus] gi|74212500|dbj|BAE30992.1| unnamed protein product [Mus musculus] Length = 492 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 114/320 (35%), Gaps = 60/320 (18%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K E ++ +E Sbjct: 131 TLVIFVADMSRP---WTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEP 187 Query: 181 --------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI---- 220 QR V D+ L PV++V K D S + Sbjct: 188 EEGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYR 247 Query: 221 ------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 I+ H R CL+ G AL++ S K K +L I H +G H Sbjct: 248 DEHLDFIQAHLRRFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPA 300 Query: 274 VVDFNEPLCIWFGTDSWSKI 293 +V + + I G D+ KI Sbjct: 301 LVVEKDAVFIPAGWDNEKKI 320 >gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] gi|73919263|sp|Q6PDL0|DC1L2_MOUSE Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|35193080|gb|AAH58645.1| Dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] Length = 492 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 76/320 (23%), Positives = 114/320 (35%), Gaps = 60/320 (18%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K E ++ +E Sbjct: 131 TLVIFVADMSRP---WTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEP 187 Query: 181 --------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI---- 220 QR V D+ L PV++V K D S + Sbjct: 188 EEGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYR 247 Query: 221 ------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 I+ H R CL+ G AL++ S K K +L I H +G H Sbjct: 248 DEHLDFIQAHLRRFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPA 300 Query: 274 VVDFNEPLCIWFGTDSWSKI 293 +V + + I G D+ KI Sbjct: 301 LVVEKDAVFIPAGWDNEKKI 320 >gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 134 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 12/131 (9%) Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--A 298 +F S+ L K +R I L FG +S VD N+PL I G DS +IG Sbjct: 1 MFTSKSEALLLK-MRGVINQLAFGIDKS--KSMCVDQNKPLFITAGLDSLCQIGSPPVPD 57 Query: 299 QSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELA 351 + ++ A ME+ + EK LK DPA+DP + E +DE+R QK++EL Sbjct: 58 SDIGKLQAHSPMELWKKVYEKLFPPKSTSTLKAIQDPARDPQYAESEVDEMRVQKDQELE 117 Query: 352 GLMRDVLLRGK 362 R K Sbjct: 118 QYKRSSSKTWK 128 >gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] gi|5531813|gb|AAD44481.1| dynein light chain-A [Homo sapiens] Length = 523 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 111/306 (36%), Gaps = 53/306 (17%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVERV 187 L+ +R+ ++ +K+ + +E +E QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 215 Query: 188 GQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPII----------RKHTCR-C 228 + DS L PV++V K D S + + H + C Sbjct: 216 QEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFC 275 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 LR G AL++ S K K ++ I +G VV + + I G D Sbjct: 276 LR-----YGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWD 328 Query: 289 SWSKIG 294 + KIG Sbjct: 329 NDKKIG 334 >gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Xenopus laevis] gi|112419317|gb|AAI22489.1| MGC154222 protein [Xenopus laevis] Length = 487 Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 71/318 (22%), Positives = 115/318 (36%), Gaps = 63/318 (19%) Query: 22 TEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 T G Q + L++ R + P + ILV G GKTT + K Sbjct: 15 TPGAGDEEDEGQSLWSSILSDVSTSAR----SKLPSGKNILVFGEDGSGKTTLMAK-LQG 69 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 EH + LEY + + NVW L + LL+ + + + + Sbjct: 70 AEHNKKGR-GLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESISETVAVF 128 Query: 140 MLDLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVERVGQQNK---- 192 + D+S+P WT +E K LR+ ++ K+ PE LEQ+ ++ + + Sbjct: 129 VGDMSRP---WTIMESLLKWASVLREHIDKL--KIPPEEMRELEQKIIKDFQEYVEPEEA 183 Query: 193 -------------------------DSEKLDPLPFPVIIVGGKYDVFSGFDPI------- 220 D+ L PV++V K D S + Sbjct: 184 LSGSPQRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEH 243 Query: 221 ---IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 I+ H + CL+ G AL++ S K K +L I H + H R+ +V Sbjct: 244 FDFIQSHIRKFCLQ-----YGSALIYTSVKEEKNLDLLYKYIVHKTY--NFHFNRAAMVV 296 Query: 277 FNEPLCIWFGTDSWSKIG 294 + + I G D+ KIG Sbjct: 297 EKDSVFIPAGWDNEKKIG 314 >gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 110/309 (35%), Gaps = 56/309 (18%) Query: 27 SATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ L+E R ++ P + +L+ G GKTT ++K EH Sbjct: 23 NEDDEGQNLWSSILSEVSTRS----SSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNK 77 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + +VW L + LL+ + L+ + ++D+S Sbjct: 78 KGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMS 136 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK------------ 192 +P L+ LR+ ++ ++ PE +EQR V+ + + Sbjct: 137 RPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRR 194 Query: 193 ----------------DSEKLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTC 226 D+ L P++IV K D + + I+ H Sbjct: 195 APAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIR 254 Query: 227 R-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 R CL+ G L++ S K K +L + H + +V + + I Sbjct: 255 RFCLQ-----YGAGLIYTSVKEEKNLDLLYKYMVHKIY--DFQFSSPALVVEKDAVFIPS 307 Query: 286 GTDSWSKIG 294 G D+ KIG Sbjct: 308 GWDNDKKIG 316 >gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] Length = 335 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 112/306 (36%), Gaps = 53/306 (17%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 16 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 70 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 71 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 129 Query: 147 QRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVERV 187 L+ +R+ ++ +K+ + +E +E QR Sbjct: 130 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 189 Query: 188 GQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR-C 228 + DS L PV++V K D S + I+ H + C Sbjct: 190 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 249 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 L+ G AL++ S K K ++ I +G VV + + I G D Sbjct: 250 LQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWD 302 Query: 289 SWSKIG 294 + KIG Sbjct: 303 NDKKIG 308 >gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A isoform 2 [Pan troglodytes] gi|134047749|sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|119584837|gb|EAW64433.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_c [Homo sapiens] gi|124297735|gb|AAI31621.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] Length = 523 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 112/306 (36%), Gaps = 53/306 (17%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVERV 187 L+ +R+ ++ +K+ + +E +E QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 215 Query: 188 GQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR-C 228 + DS L PV++V K D S + I+ H + C Sbjct: 216 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 L+ G AL++ S K K ++ I +G VV + + I G D Sbjct: 276 LQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWD 328 Query: 289 SWSKIG 294 + KIG Sbjct: 329 NDKKIG 334 >gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Rattus norvegicus] gi|2494218|sp|Q62698|DC1L2_RAT Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|619665|gb|AAA80334.1| LIC-2 gi|149032345|gb|EDL87236.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_b [Rattus norvegicus] Length = 497 Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 114/319 (35%), Gaps = 58/319 (18%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K + ++ +E Sbjct: 131 TLVIFVADMSRP---WTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEP 187 Query: 181 --------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI---I 221 QR V D+ L PV++V K D S + Sbjct: 188 EEGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYR 247 Query: 222 RKHTCRCLRSM-AHL------IGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 +H L + AHL G AL++ S K K +L I H +G H + Sbjct: 248 DEH----LDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPAL 301 Query: 275 VDFNEPLCIWFGTDSWSKI 293 V + + I G D+ KI Sbjct: 302 VVEKDAVFIPAGWDNEKKI 320 >gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] gi|62531080|gb|AAH93336.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 110/309 (35%), Gaps = 56/309 (18%) Query: 27 SATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ L+E R ++ P + +L+ G GKTT ++K EH Sbjct: 23 NEDDEGQNLWSSILSEVSTRS----SSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNK 77 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + +VW L + LL+ + L+ + ++D+S Sbjct: 78 KGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMS 136 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK------------ 192 +P L+ LR+ ++ ++ PE +EQR V+ + + Sbjct: 137 RPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRR 194 Query: 193 ----------------DSEKLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTC 226 D+ L P++IV K D + + I+ H Sbjct: 195 APAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIR 254 Query: 227 R-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 R CL+ G L++ S K K +L + H + +V + + I Sbjct: 255 RFCLQ-----YGAGLIYTSVKEEKNLDLLYKYMVHKIY--DFQFSSPALVVEKDAVLIPS 307 Query: 286 GTDSWSKIG 294 G D+ KIG Sbjct: 308 GWDNDKKIG 316 >gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] Length = 480 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 70/318 (22%), Positives = 113/318 (35%), Gaps = 63/318 (19%) Query: 22 TEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 G Q + L++ R + P + ILV G GKTT + K Sbjct: 10 ALGAGGEEDEGQSLWSSILSDVSTSAR----SKLPSGKNILVFGEDGSGKTTLVAK-LQG 64 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 EH + LEY + + NVW L + LL+ + + + + Sbjct: 65 AEHNKKGR-GLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESIGETVAVF 123 Query: 140 MLDLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQRTVERVGQQNK---- 192 + D+S+P WT +E K LR+ ++ K+ PE LEQ+ ++ + + Sbjct: 124 VGDMSRP---WTIMESLLKWASVLREHIDKL--KIPPEEIRELEQKIIKDFQEYVEPEDA 178 Query: 193 -------------------------DSEKLDPLPFPVIIVGGKYDVFSGFDPI------- 220 D+ L PV++V K D S + Sbjct: 179 LSGSPQRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEH 238 Query: 221 ---IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 I+ H R CL+ G AL++ S K K +L I H + H + +V Sbjct: 239 FDFIQSHIRRFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTY--NFHFNCAAMVV 291 Query: 277 FNEPLCIWFGTDSWSKIG 294 + + I G D+ KIG Sbjct: 292 EKDSVFIPAGWDNEKKIG 309 >gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] Length = 492 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 75/319 (23%), Positives = 114/319 (35%), Gaps = 58/319 (18%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K + ++ +E Sbjct: 131 TLVIFVADMSRP---WTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEP 187 Query: 181 --------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI---I 221 QR V D+ L PV++V K D S + Sbjct: 188 EEGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYR 247 Query: 222 RKHTCRCLRSM-AHL------IGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 +H L + AHL G AL++ S K K +L I H +G H + Sbjct: 248 DEH----LDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPAL 301 Query: 275 VDFNEPLCIWFGTDSWSKI 293 V + + I G D+ KI Sbjct: 302 VVEKDAVFIPAGWDNEKKI 320 >gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light intermediate chain 2, cytosolic (LIC53/55) (LIC-2) [Canis familiaris] Length = 481 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 77/329 (23%), Positives = 120/329 (36%), Gaps = 64/329 (19%) Query: 7 FHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK 66 F H++ + ++R + T + L+E R R + P + ILV G Sbjct: 3 FLQTHEQTRVFCLRR----QGTTLRFW--SSILSEVSTRAR----SKLPSGKNILVFGED 52 Query: 67 CVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEV 125 GKTT + K EH + LEY + + NVW L + LL+ Sbjct: 53 GSGKTTLMTK-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKF 110 Query: 126 PMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVT 172 + L + VI + D+S+P WT +E K LR+ +M K Sbjct: 111 AVSAESLPETLVIFVADMSRP---WTVMESLQKWASVLREHIDKMKIPPEEMRELERKFV 167 Query: 173 PELREILE---------QRTVER-VGQQNK-------DSEKLDPLPFPVIIVGGKYDVFS 215 + ++ +E QR G + D+ L PV++V K D S Sbjct: 168 KDFQDYIEPEEGCQGSPQRRGPLTSGPDEENVALPLGDNMLTHNLGIPVLVVCTKCDAVS 227 Query: 216 GFDPI----------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 + I+ H R CL+ G AL++ S K K +L I H +G Sbjct: 228 VLEKEHDYRDEHFDFIQSHLRRFCLQ-----YGAALIYTSVKEEKNLDLLYKYIVHKTYG 282 Query: 265 SPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 H +V + + I G D+ KI Sbjct: 283 --FHFVTPALVVEKDAVFIPAGWDNEKKI 309 >gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [Danio rerio] Length = 500 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 109/308 (35%), Gaps = 56/308 (18%) Query: 27 SATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ L+E R ++ P + +L+ G GKTT ++K EH Sbjct: 23 NEDDEGQNLWSSILSEVSTRS----SSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNK 77 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + +VW L + LL+ + L+ + ++D+S Sbjct: 78 KGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMS 136 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK------------ 192 +P L+ LR+ ++ ++ PE +EQR V+ + + Sbjct: 137 RPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRR 194 Query: 193 ----------------DSEKLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTC 226 D+ L P++IV K D + + I+ H Sbjct: 195 APAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIR 254 Query: 227 R-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 R CL+ G L++ S K K +L + H + +V + + I Sbjct: 255 RFCLQ-----YGAGLIYTSVKEEKNLDLLYKYMVHKIY--DFQFSSPALVVEKDAVFIPS 307 Query: 286 GTDSWSKI 293 G D+ KI Sbjct: 308 GWDNDKKI 315 >gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light chain-A [Canis familiaris] Length = 524 Score = 152 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 67/306 (21%), Positives = 112/306 (36%), Gaps = 53/306 (17%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAISLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVERV 187 L+ +R+ ++ +K+ + +E +E QR Sbjct: 156 WTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRRNTGS 215 Query: 188 GQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR-C 228 + DS L PV++V K D S + I+ H + C Sbjct: 216 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 L+ G AL++ S K K ++ I +G VV + + I G D Sbjct: 276 LQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWD 328 Query: 289 SWSKIG 294 + KIG Sbjct: 329 NDKKIG 334 >gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 152 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 66/308 (21%), Positives = 113/308 (36%), Gaps = 57/308 (18%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---------------- 190 L+ +R+ ++ K+ PE + +EQ+ + + Sbjct: 156 WTALDSLQKWASVVREHVDKL--KIPPEEMKQIEQKLIRDFQEYVEPGEDFPASPQGRNT 213 Query: 191 --NKDSE-----------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR 227 +D + L PV++V K D S + I+ H + Sbjct: 214 ASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRK 273 Query: 228 -CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFG 286 CL+ G AL++ S K K ++ I +G VV + + I G Sbjct: 274 FCLQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAG 326 Query: 287 TDSWSKIG 294 D+ KIG Sbjct: 327 WDNDKKIG 334 >gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon nigroviridis] Length = 463 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 102/285 (35%), Gaps = 50/285 (17%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV 107 ++ P + ILV G GKTT + K + EH + LEY + + Sbjct: 9 TRSSSKLPSGKNILVFGEDGSGKTTLMAK-LEGAEHNKKGR-GLEYLYLSVHDEDRDDLT 66 Query: 108 -MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 NVW L + LL+ + L + ++D+S+P L+ LRD + Sbjct: 67 RCNVWILDGDLYHKGLLKFAVSAKSLSDCLAVFVVDMSRPWIIMDSLQKWSSVLRDHLDK 126 Query: 167 MMEKVTPELREILEQRTVERVGQQNK---------------------------DSEKLDP 199 + K+ P++ +EQ+ V+ + ++ ++ Sbjct: 127 L--KIEPDVMREMEQKMVKAFQEYSEPEDANSSSPQRRAPTAGEDEAVVLPLGENTLTHN 184 Query: 200 LPFPVIIVGGKYDVFSGFDPI----------IRKHTCR-CLRSMAHLIGGALLFYSQKMP 248 L PV++V K D S + I+ H + CL+ G L + S K Sbjct: 185 LGIPVLVVCTKCDAVSVLEKEHDYKEEHFDFIQSHIRKFCLQ-----YGAGLFYTSVKEE 239 Query: 249 KLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 K +L I H + +V + + I G D+ KI Sbjct: 240 KNLDLLYKYIVHKLY--DFQFTTPALVVEKDAVFIPSGWDNEKKI 282 >gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light chain A [Gallus gallus] gi|2494217|sp|Q90828|DC1L1_CHICK Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) (LIC57/59) gi|510249|emb|CAA55698.1| dyenin light chain A [Gallus sp.] Length = 515 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 71/316 (22%), Positives = 123/316 (38%), Gaps = 60/316 (18%) Query: 21 RTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 R G E ++ L+E R R + P +++L+LG GKT+ I K Sbjct: 27 RAGGEEDDGQNLWSC--ILSEVSTRSR----SKLPSGKSVLLLGEDGAGKTSLIGKI-QG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NV L + LL+ M + L+ ++L Sbjct: 80 IEEYKKGR-GMEYLYLNVHDEDRDDQTRCNVRILDGDLYHKGLLKFAMEANSLKDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE------ 180 ++D+S+P WT ++ K +R+ ++ +K+ + +E +E Sbjct: 139 VVDMSRP---WTAMDSLQKWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFP 195 Query: 181 ---QRTVERVGQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPI--------- 220 QR + + DS L PV++V K D S + Sbjct: 196 ASPQRRNTSLQEDKDDSVILPLGADTLTCNLGIPVVVVCTKCDAISVLEKEHDYRDEHFD 255 Query: 221 -IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFN 278 I+ H R CL+ G AL++ S K K ++ I +G P + + VV+ + Sbjct: 256 FIQSHIRRFCLQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYGFPFN-VPAVVVEKD 309 Query: 279 EPLCIWFGTDSWSKIG 294 + I G D+ KIG Sbjct: 310 -AVFIPAGWDNDKKIG 324 >gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 [Bos taurus] gi|86438315|gb|AAI12622.1| Similar to Dynein light intermediate chain 1, cytosolic (Dynein light chain A) (DLC-A) [Bos taurus] Length = 524 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 67/308 (21%), Positives = 113/308 (36%), Gaps = 57/308 (18%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDPYHKGLLKFSLDAISLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---------------- 190 L+ +R+ ++ K+ PE + +EQ+ V + Sbjct: 156 WTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQRRST 213 Query: 191 --NKDSE-----------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR 227 +D + L PV++V K D S + I+ H + Sbjct: 214 ASQEDRDDSVLLPLGADTLTQNLGVPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRK 273 Query: 228 -CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFG 286 CL+ G AL++ S K K ++ I +G VV + + I G Sbjct: 274 FCLQ-----YGAALIYASVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAG 326 Query: 287 TDSWSKIG 294 D+ KIG Sbjct: 327 WDNDKKIG 334 >gi|57092883|ref|XP_531798.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 2 isoform 1 [Canis familiaris] Length = 107 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 5/110 (4%) Query: 29 TPSIQDIAGRLAEEQQRLRQLEATTTP-KERTILVLGSKCVGKTTAINKFFDREEHATRP 87 PS + +A+ + R E E+++ +GSK GKTT I + DR+E +P Sbjct: 1 MPS--ETLWEIAKAEVEKRGSEGDGLEIGEKSVFFIGSKNGGKTTIILRCLDRDE-PPKP 57 Query: 88 TLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLA 136 TLALEY++GRR P + + WELG + L+ +P+ + L+ + Sbjct: 58 TLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTVN 107 >gi|26252194|gb|AAH40558.1| DYNC2LI1 protein [Homo sapiens] Length = 144 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 6/122 (4%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++ E+ + +GSK GKTT I + DR+E +PTL Sbjct: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKPTL 62 Query: 90 ALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQ---LAVI-LMLDLS 144 ALEY++GRR +P + + WELG + L+ +P+ L+ +++ + ++L+ Sbjct: 63 ALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRSWQLSSLLPVSMNLT 122 Query: 145 QP 146 P Sbjct: 123 TP 124 >gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] gi|11992258|gb|AAG42486.1|AF317841_1 cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] Length = 508 Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 117/312 (37%), Gaps = 53/312 (16%) Query: 23 EGGESA-TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 G ++ Q++ L+E R R + P + +L+LG GKT+ I K Sbjct: 25 SGDTASEDEDGQNLWSSILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE--------- 180 ++D+S+P L+ +R+ ++ EK+ +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 181 QRTVERVGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFDPI----------IRK 223 QR +++ + L PV++V K D S + I+ Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 224 HTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 H + CL+ G AL++ S K K ++ I +G + + VV+ + + Sbjct: 259 HIRKFCLQ-----YGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMP-AVVVEKD-AVF 311 Query: 283 IWFGTDSWSKIG 294 I G D+ KIG Sbjct: 312 IPAGWDNDKKIG 323 >gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] Length = 508 Score = 142 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 64/312 (20%), Positives = 117/312 (37%), Gaps = 53/312 (16%) Query: 23 EGGESA-TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 G ++ Q++ L+E R R + P + +L+LG GKT+ I K Sbjct: 25 SGDTASEDEDGQNLWSSILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE--------- 180 ++D+S+P L+ +R+ ++ EK+ +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 181 QRTVERVGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFDPI----------IRK 223 QR +++ + L PV++V K D S + I+ Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 224 HTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 H + CL+ G AL++ S K K ++ I +G + + VV+ + + Sbjct: 259 HIRKFCLQ-----YGAALIYTSIKENKNIDIVYKYIVQQLYGFQFNMP-AVVVEKD-AVF 311 Query: 283 IWFGTDSWSKIG 294 I G D+ KIG Sbjct: 312 IPAGWDNDRKIG 323 >gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic, light intermediate polypeptide 2 [Macaca mulatta] Length = 497 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 74/320 (23%), Positives = 111/320 (34%), Gaps = 55/320 (17%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K + ++ +E Sbjct: 131 TLVIFVADMSRP---WTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEP 187 Query: 181 --------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVF-------SGF 217 QR V D+ L PV++V K SG Sbjct: 188 EEGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKVRARGLLAWLGSGS 247 Query: 218 DPIIRKHTCRC----LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 + R+ R LR G AL++ S K K +L I H +G H Sbjct: 248 EHAFREKNVRIFDSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPA 305 Query: 274 VVDFNEPLCIWFGTDSWSKI 293 +V + + I G D+ KI Sbjct: 306 LVVEKDAVFIPAGWDNEKKI 325 >gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 [Xenopus tropicalis] gi|111305599|gb|AAI21354.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Xenopus tropicalis] Length = 508 Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 116/307 (37%), Gaps = 52/307 (16%) Query: 27 SATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 S Q++ L+E R R + P + +L+LG GKT+ I K E Sbjct: 30 SEDEDGQNLWSSILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGK-LQGIEEYK 84 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + +EY + + Q NVW L + LL+ M ++ ++L++D+S Sbjct: 85 KGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIMLVVDMS 143 Query: 145 QPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVE 185 +P L+ +R+ ++ EK+ +E +E Q+ Sbjct: 144 RPWLALDSLQKWASVIREHVDKLKIPPEEMKEMEEKIVRNFQEYVEPGEEFPASPQKRNT 203 Query: 186 RVGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR- 227 +Q+ + L PV++V K D S + I+ H + Sbjct: 204 SSDEQDDSVILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQSHIRKF 263 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 CL+ G AL++ S K K ++ I +G + + VV+ + + I G Sbjct: 264 CLQ-----YGAALIYTSIKENKNIDIVYKYIVQQLYGFLFNMP-AVVVEKD-AVFIPAGW 316 Query: 288 DSWSKIG 294 D+ KIG Sbjct: 317 DNDKKIG 323 >gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632687|emb|CAM56700.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 489 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 113/304 (37%), Gaps = 54/304 (17%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + ++V+G GKTT + K E + Sbjct: 26 EEDGQNLWSSILSEVSTRSR----SKLPSGKNVVVMGEVGSGKTTLVAK-LQGVEEYMKG 80 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + Q N W L + L + + L+ ++ ++DLS+P Sbjct: 81 R-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSRP 139 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------------NK 192 L+ +RD ++ +V PE LE R ++ + N Sbjct: 140 WLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQRRNP 197 Query: 193 DSE------------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR-CL 229 +S+ L P+++V K D S + I+ H R CL Sbjct: 198 ESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIRRFCL 257 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 + G ALL+ S K K +L + H +G P + + VV+ + + I G D+ Sbjct: 258 Q-----YGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSP-AQVVEKDS-VFIPSGWDN 310 Query: 290 WSKI 293 KI Sbjct: 311 EKKI 314 >gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] Length = 485 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 113/304 (37%), Gaps = 54/304 (17%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + ++V+G GKTT + K E + Sbjct: 22 EEDGQNLWSSILSEVSTRSR----SKLPSGKNVVVMGEVGSGKTTLVAK-LQGVEEYMKG 76 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + Q N W L + L + + L+ ++ ++DLS+P Sbjct: 77 R-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSRP 135 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------------NK 192 L+ +RD ++ +V PE LE R ++ + N Sbjct: 136 WLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQRRNP 193 Query: 193 DSE------------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR-CL 229 +S+ L P+++V K D S + I+ H R CL Sbjct: 194 ESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIRRFCL 253 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 + G ALL+ S K K +L + H +G P + + VV+ + + I G D+ Sbjct: 254 Q-----YGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSP-AQVVEKDS-VFIPSGWDN 306 Query: 290 WSKI 293 KI Sbjct: 307 EKKI 310 >gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-intermediate chain [Xenopus laevis] gi|28280005|gb|AAH45030.1| Dnclic1-prov protein [Xenopus laevis] Length = 508 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 66/307 (21%), Positives = 112/307 (36%), Gaps = 52/307 (16%) Query: 27 SATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 S Q++ L+E R R + P + +L+LG GKT+ I K E Sbjct: 30 SEDEDGQNLWSSILSEVSTRSR----SKLPFGKNVLLLGEDGAGKTSLIGK-LQGIEEYK 84 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + +EY + + Q NVW L + LL+ M ++ ++L++D+S Sbjct: 85 KGR-GMEYLYINVHDDDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIMLVVDMS 143 Query: 145 QPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTV- 184 +P L+ +R+ ++ E++ +E +E QR Sbjct: 144 RPWLALDSLQKWASVIREHVDKLKIPPEEMREMEERIVRHFQEYVEPGDELPTSPQRRNT 203 Query: 185 ------ERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR- 227 + V D L PV++V K D S + I+ H + Sbjct: 204 SSDECDDSVILPLADDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQSHIRKF 263 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 CL+ G AL++ S K K ++ I +G VV + + I G Sbjct: 264 CLQ-----YGAALIYTSIKENKNIDIVYKYIVQQLYG--FQFKMPAVVVEKDAVFIPAGW 316 Query: 288 DSWSKIG 294 D+ KIG Sbjct: 317 DNDKKIG 323 >gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light intermediate chain 1 [Danio rerio] gi|94733316|emb|CAK11123.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632686|emb|CAM56699.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 501 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 113/304 (37%), Gaps = 54/304 (17%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + ++V+G GKTT + K E + Sbjct: 28 EEDGQNLWSSILSEVSTRSR----SKLPSGKNVVVMGEVGSGKTTLVAK-LQGVEEYMKG 82 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + Q N W L + L + + L+ ++ ++DLS+P Sbjct: 83 R-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILFVVDLSRP 141 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------------NK 192 L+ +RD ++ +V PE LE R ++ + N Sbjct: 142 WLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPGSDLDAVPQRRNP 199 Query: 193 DSE------------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR-CL 229 +S+ L P+++V K D S + I+ H R CL Sbjct: 200 ESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQSHIRRFCL 259 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 + G ALL+ S K K +L + H +G P + + VV+ + + I G D+ Sbjct: 260 Q-----YGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNSP-AQVVEKDS-VFIPSGWDN 312 Query: 290 WSKI 293 KI Sbjct: 313 EKKI 316 >gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A isoform 1 [Pan troglodytes] Length = 472 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 97/270 (35%), Gaps = 48/270 (17%) Query: 64 GSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQL 122 G GKT+ I K E + LEY + + Q NVW L + L Sbjct: 23 GEDGAGKTSLIRKI-QGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGL 80 Query: 123 LEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVT 172 L+ + L+ V+L++D+S+P L+ +R+ ++ +K+ Sbjct: 81 LKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLI 140 Query: 173 PELREILE---------QRTVERVGQQNKDSE--------KLDPLPFPVIIVGGKYDVFS 215 + +E +E QR + DS L PV++V K D S Sbjct: 141 RDFQEYVEPGEDFPASPQRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAIS 200 Query: 216 GFDPI----------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 + I+ H + CL+ G AL++ S K K ++ I +G Sbjct: 201 VLEKEHDYRDEHFDFIQSHIRKFCLQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYG 255 Query: 265 SPAHPFRSHVVDFNEPLCIWFGTDSWSKIG 294 VV + + I G D+ KIG Sbjct: 256 --FPYKIPAVVVEKDAVFIPAGWDNDKKIG 283 >gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin light chain A [Ornithorhynchus anatinus] Length = 471 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 101/270 (37%), Gaps = 48/270 (17%) Query: 64 GSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQL 122 G GKT+ I K + + +EY + + Q NVW L + L Sbjct: 21 GEDGAGKTSLIGK-MQGIDEYKKGR-GMEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGL 78 Query: 123 LEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVT 172 L+ M + L+ V+L++D+S+P L+ +R+ ++ +K+ Sbjct: 79 LKFAMDANSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHIDKLKIPPEEMKEMEQKLI 138 Query: 173 PELREILE---------QRTVERVGQQNKDSE--------KLDPLPFPVIIVGGKYDVFS 215 + +E +E QR + DS L PV++V K D S Sbjct: 139 RDFQEYIEPGEDFPASPQRRNTTSQEDKDDSVILPLGADTLTYNLGIPVLVVCTKCDAIS 198 Query: 216 GFDPI----------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 + I+ H + CL+ G AL++ S K K ++ I +G Sbjct: 199 VLEKEHDYRDEHFDFIQSHIRKFCLQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYG 253 Query: 265 SPAHPFRSHVVDFNEPLCIWFGTDSWSKIG 294 P + VV+ + + I G D+ KIG Sbjct: 254 FPF-KIPAVVVEKD-AVFIPAGWDNDKKIG 281 >gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein light intermediate chain 2, partial [Equus caballus] Length = 490 Score = 132 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 66/287 (22%), Positives = 99/287 (34%), Gaps = 58/287 (20%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 15 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 70 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 71 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 128 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K + ++ +E Sbjct: 129 TLVIFVADMSRP---WTVMESLQKWASVLREHIDKMKIPPEEMRELERKFVKDFQDYIEP 185 Query: 181 --------QRTVER-VGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFDPI---- 220 QR G + D+ L PV++V K D S + Sbjct: 186 EEGCQGSPQRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYR 245 Query: 221 ------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICH 260 I+ H R CL+ G AL+ S K K + I H Sbjct: 246 DEHFDFIQSHLRRFCLQ-----YGAALIDTSVKEAKSLDLKNKCIIH 287 >gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon nigroviridis] Length = 400 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 105/295 (35%), Gaps = 57/295 (19%) Query: 38 RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGR 97 L+E R + P + +LV+G GKTT + K + + LEY + Sbjct: 3 ILSEVSTHSR----SKLPSGKNVLVMGEVGSGKTTLVAK-LQGVDEYMKGR-GLEYLYFS 56 Query: 98 RIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECA 156 N W L + L V + + +++ +D+S+P W L+ Sbjct: 57 VHDDDIDDHARCNAWVLDGDLYHKGLQGVAVPVDSIGNTLLLITVDMSRP---WNALDSL 113 Query: 157 YKG---LRDTAQQMMEKVTPELREILEQRTVERVGQQNK--------------------- 192 K R+ ++ +V PE LE V++ + + Sbjct: 114 QKWAAVAREHIDKL--RVAPETLRELEHNLVKQFQEYVEPGSGEDGTPQRRSEDEESILL 171 Query: 193 ---DSEKLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR-CLRSMAHLIGG 238 DS L PV++V K D + I+ H R CL+ G Sbjct: 172 PLGDSTLTHNLGIPVVVVCTKCDAIGTLEKEHDYRDEHLDFIQSHLRRFCLQ-----YGA 226 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 +L++ S K K +L + H +G P P + VV + + I G D+ KI Sbjct: 227 SLVYTSVKEMKNLDILYKYLVHRLYGFPF-PCPAQVV-ERDAVFIPSGWDNEKKI 279 >gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella vectensis] gi|156225136|gb|EDO45956.1| predicted protein [Nematostella vectensis] Length = 422 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 111/279 (39%), Gaps = 47/279 (16%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVM-NVW 111 P ++I+++G+ GKTT I+K +E+ ++ LEY++ NVW Sbjct: 14 KLPSHKSIILIGNDESGKTTLISKLRGKEDDISKGH-GLEYTYLEVHDEEIDDYTRLNVW 72 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 L + LL+ + + + V++++D S+P L + LR+ + K+ Sbjct: 73 ILDGDPRNKSLLKYALTPKHARDVLVVMVVDCSRPWAIMESLHSWTEILREHIHSL--KL 130 Query: 172 TPELREILEQRTVERVGQQN-------------------------KDSEKLDPLPFPVII 206 +P+ +E++ V++ +++ +D L P+I+ Sbjct: 131 SPKELNEMEEKIVQQFQDYTDTEEASDENRRRSGTKDEDKVVLPLEENVLVDNLGIPMIV 190 Query: 207 VGGKYDVFSGFDPI----------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLR 255 + K D + I++H R CL G AL + S K K + Sbjct: 191 LVTKTDCMLSLEKDRDFHDEHFDFIQQHIRRYCL-----KHGAALFYTSVKENKNCNLFL 245 Query: 256 DTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG 294 + H +G P + VVD + + I G DS KIG Sbjct: 246 KYVLHKIYGLPFKSP-ALVVDKDS-VFIPSGWDSMKKIG 282 >gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] Length = 433 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 99/269 (36%), Gaps = 49/269 (18%) Query: 63 LGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQ 121 +G GKTT + K E + LEY + Q N W L + Sbjct: 1 MGEVGSGKTTLVAK-LQGVEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKG 58 Query: 122 LLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQ 181 L + + L+ ++ ++DLS+P L+ +RD ++ +V PE LE Sbjct: 59 LQKFAISLENLEDSLILFVVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEH 116 Query: 182 RTVERVGQQ--------------NKDSE------------KLDPLPFPVIIVGGKYDVFS 215 R ++ + N +S+ L P+++V K D S Sbjct: 117 RLTKQFQEYVEPGSDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAIS 176 Query: 216 GFDPI----------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 + I+ H R CL+ G ALL+ S K K +L + H +G Sbjct: 177 TLEKEHDYKDEHLDFIQSHIRRFCLQ-----YGAALLYTSMKENKNLDLLYKYLVHRLYG 231 Query: 265 SPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 P + + VV+ + + I G D+ KI Sbjct: 232 FPFNSP-AQVVEKDS-VFIPSGWDNEKKI 258 >gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_a [Rattus norvegicus] Length = 455 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 92/262 (35%), Gaps = 50/262 (19%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K + ++ +E Sbjct: 131 TLVIFVADMSRP---WTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKDFQDYIEP 187 Query: 181 --------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI---I 221 QR V D+ L PV++V K D S + Sbjct: 188 EEGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYR 247 Query: 222 RKHTCRCLRSM-AHLIGGALLF 242 +H L + AHL G L F Sbjct: 248 DEH----LDFIQAHLRGFCLQF 265 >gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_b [Mus musculus] Length = 458 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 82/236 (34%), Gaps = 42/236 (17%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMM----------EKVTPELREILE- 180 VI + D+S+P WT +E K LR+ +M K E ++ +E Sbjct: 131 TLVIFVADMSRP---WTIMESLQKWASVLREHIDKMKIPPEEMRDLERKFMKEFQDYIEP 187 Query: 181 --------QRTVE--------RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI 220 QR V D+ L PV++V K D S + Sbjct: 188 EEGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKE 243 >gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974436|ref|XP_001184479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 483 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 59/311 (18%), Positives = 106/311 (34%), Gaps = 54/311 (17%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVW 111 P ++ILVLG GKTT +++ E + LEY + + VW Sbjct: 41 KLPSCKSILVLGEDETGKTTLLSR-LQGVEDPKKG-YGLEYLYLDVRDEDRDDTTRCGVW 98 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 L + E LL + L+ + VI+ +D+ +P L+ + +R + ++ Sbjct: 99 ILAGENEHEDLLRYALTADNLEHMLVIIAVDMCRPWNIMDSLQKWTQVIRRHVDSL--RI 156 Query: 172 TPELREILEQRTVERVGQQNK-----------------------DSE----------KLD 198 PE LEQR V++ + D E Sbjct: 157 PPEKLRELEQRLVQQFQAYTEPETGQDSSVTRRTSGVTKPTGAEDEEAVVLPLGETTLTH 216 Query: 199 PLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 L P+++V K D + + + +R G AL + S K K Sbjct: 217 NLGVPIVVVVTKSDYVNTLEKEQDYSDEHLDFLQQNVRKFCLNYGAALFYVSVKENKNCD 276 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV 312 +L + H + P + + +V + L + G D+ K+ A Sbjct: 277 LLNRYLLHRLYDFPFNS--AALVVEKDALFVPSGWDNLQKVSILYEN-----MANID--- 326 Query: 313 PQLQLEKQKLK 323 P+ ++ +K Sbjct: 327 PEKPYDEVIIK 337 >gi|158599820|gb|EDP37275.1| hypothetical protein Bm1_12090 [Brugia malayi] Length = 116 Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 15/112 (13%) Query: 32 IQDIAG--RLAE-EQQRLRQLEATTT----------PKERTILVLGSKCVGKTTAINKFF 78 I +A L E E++ +RQ +A + + +++ GS+ GKT+ I +F Sbjct: 4 IWSLARQQYLEECEKRTVRQQDAINSYINLIGSDLQTSDTRLIICGSRNCGKTSMIFRFL 63 Query: 79 DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTH 130 +R E T+PT+ALEY++GRR GK V N+WELG N LL++P+ ++ Sbjct: 64 NRNED-TKPTIALEYTYGRR-NRGKMKDVGNIWELGGGTNLCNLLQIPLSSN 113 >gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, isoform A [Tribolium castaneum] Length = 475 Score = 110 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 61/321 (19%), Positives = 111/321 (34%), Gaps = 61/321 (19%) Query: 17 MFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINK 76 M + + + + ++ + L++ Q P + +LVLG GKTT + K Sbjct: 1 MPEEVAKPTDDSKKNLW--SQILSDVQ----NNGNPKLPSCKQVLVLGDNECGKTTIVAK 54 Query: 77 FFDREEHATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQL 135 E + + LEY++ + Q +VW L LL+ + Q Sbjct: 55 -LQGVEDPKKGS-GLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHTDLLKFALNEETFQHT 112 Query: 136 AVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQ-------------- 181 VIL + ++ P L+ L D ++ K+ +LR+ Q Sbjct: 113 LVILTVTMTAPWSILEQLQHWASVLADHLDKL--KLDVDLRQNRRQHIVKMWQEYVEPGD 170 Query: 182 ---------RTVERVGQQNKDSE---------KLDPLPFPVIIVGGKYDVFSGFDPI--- 220 R+ G E + L +++V K D + Sbjct: 171 ELDPASPMKRSSRNFGDGEDGLEEQTSLPEGTLTNNLGLDIVVVVTKTDYIQTLEKEHDY 230 Query: 221 -------IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRS 272 +++ + CL+ G AL + S K K +L + H +G P + Sbjct: 231 RDEHLDFMQQWIRKFCLQ-----YGAALFYTSAKEDKNCDLLYKYLTHRIYGFPF-RTPA 284 Query: 273 HVVDFNEPLCIWFGTDSWSKI 293 VV+ + + I G D+ +KI Sbjct: 285 LVVEKD-AVFIPAGWDNMNKI 304 >gi|157128066|ref|XP_001661298.1| dynein light intermediate chain [Aedes aegypti] gi|108872707|gb|EAT36932.1| dynein light intermediate chain [Aedes aegypti] Length = 494 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 64/298 (21%), Positives = 102/298 (34%), Gaps = 53/298 (17%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGK 103 ++ +T P +++LVLG GKTT I K E + + LEY++ + Sbjct: 37 SEVQTQSSTKLPSNKSVLVLGDNASGKTTLIAK-LQGVEDPKKGS-GLEYAYIDVRDEYR 94 Query: 104 SPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 VW L LL+ + VIL L ++ P + LE K L D Sbjct: 95 DDVTRLGVWILDGDPGHTNLLKYALNETNYAHTLVILTLSMTTPWSWVDQLEHWIKMLDD 154 Query: 163 TAQQMMEKVTPELREILEQR----------TVERVGQQNKDSEK---------LDPLPFP 203 + K+ PE R+ QR T++ + + LD LP P Sbjct: 155 HIAGL--KIDPEERQQCRQRLVTVWQSYCDTIDELDPGSPIKRTNRLSSVDDDLDALPLP 212 Query: 204 ----VIIVG-------GKYDVFSGFDPI----------IRKHTCR-CLRSMAHLIGGALL 241 +G K D + + +++ R CL + G +L Sbjct: 213 EGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQWIRRFCL-----VYGASLF 267 Query: 242 FYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 + S K K +L + H +G P V + + I G D+ KI Sbjct: 268 YTSVKEDKNCDLLYKYLTHRIYGLPFRTPALIV--EKDAVLIPAGWDNMKKINILYEN 323 >gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoobscura] gi|54643019|gb|EAL31763.1| GA15140-PA [Drosophila pseudoobscura] Length = 499 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 61/315 (19%), Positives = 106/315 (33%), Gaps = 52/315 (16%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEY 93 ++ + E ++ +T P +++LVLG GKTT I K E + + LEY Sbjct: 31 NLWSAILNE---VQTQGSTKLPANKSVLVLGDNATGKTTLIAK-LQGVEDPKKGS-GLEY 85 Query: 94 SFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTD 152 ++ + VW L LL + VIL + ++QP + Sbjct: 86 AYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHFALNETNYAHTLVILTVSMTQPWGWLEQ 145 Query: 153 LECAYKGLRDTAQQM-MEKVTPELREILEQRTVERVGQQNKDSE---------------- 195 L K L + + +E E+ T + + D + Sbjct: 146 LNHWIKVLGQHIESLPLEAKDKEMARQRLATTWQSYCEVGDDLDPGSPVKRTMRNNSIDE 205 Query: 196 ----------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR-CLRSMAH 234 + L +++V K D + + I++ CLR+ Sbjct: 206 DDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRSFCLRT--- 262 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG 294 G +L + S K K +L + H +G P + VV+ + + I G DS KI Sbjct: 263 --GASLFYTSVKEDKNCDLLYKYLTHRIYGLPF-RTPALVVEKD-AVLIPAGWDSLKKIS 318 Query: 295 DTGAQSVERIGATFG 309 + I A Sbjct: 319 ILYEN-MHGIKAESP 332 >gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosophila melanogaster] gi|24641224|ref|NP_727500.1| Dlic2 CG1938-PC, isoform C [Drosophila melanogaster] gi|24641226|ref|NP_727501.1| Dlic2 CG1938-PD, isoform D [Drosophila melanogaster] gi|16182605|gb|AAL13531.1| GH06357p [Drosophila melanogaster] gi|22832089|gb|AAF48011.2| CG1938-PA, isoform A [Drosophila melanogaster] gi|22832090|gb|AAN09288.1| CG1938-PC, isoform C [Drosophila melanogaster] gi|22832091|gb|AAN09289.1| CG1938-PD, isoform D [Drosophila melanogaster] Length = 493 Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 103/307 (33%), Gaps = 55/307 (17%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEY 93 ++ + E ++ +T P +++LVLG GKTT I K E + + LEY Sbjct: 29 NLWSAILNE---VQTQGSTKLPSNKSVLVLGDNATGKTTLIAK-LQGVEDPKKGS-GLEY 83 Query: 94 SFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTD 152 ++ + VW L LL + VIL + ++QP + Sbjct: 84 AYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQPWGWLEQ 143 Query: 153 LECAYKGLRDTAQQMMEKVTPELREILEQR---TVERVGQQNKDSE-------------- 195 L K L + + + +E QR T + + D + Sbjct: 144 LNHWIKVLGQHIDSLQ--LDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRTMRNNSI 201 Query: 196 ------------KLDPLPFPVIIVGGKYDVFSGFDPI----------IRKHTCR-CLRSM 232 + L +++V K D + + I++ CLR Sbjct: 202 DEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLR-- 259 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 G +L + S K K VL + H +G P + VV+ + + I G DS K Sbjct: 260 ---HGTSLFYTSVKEDKNCDVLYKYLTHRIYGLPF-RTPALVVEKD-AVLIPAGWDSLKK 314 Query: 293 IGDTGAQ 299 I Sbjct: 315 ISILYEN 321 >gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae str. PEST] gi|157018577|gb|EAA06916.4| AGAP000723-PA [Anopheles gambiae str. PEST] Length = 470 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 104/298 (34%), Gaps = 53/298 (17%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGK 103 ++ T P +++LVLG GKTT I K E + + LEY++ + Sbjct: 5 SEVQTQSNTKLPSNKSVLVLGDNASGKTTLIAK-LQGVEDPKKGS-GLEYAYIDVRDEYR 62 Query: 104 SPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 +VW L LL+ + VIL L ++ P + L+ K L D Sbjct: 63 DDVTRLSVWILDGDPGHNNLLKFALNEQNFPHTLVILTLSMTTPWSWVDQLQHWMKILDD 122 Query: 163 TAQQMMEKVTPELREILEQRT---VERVGQQNKDSEK----------------LDPLPFP 203 + K+ PE ++ + R + + D + LD LP P Sbjct: 123 HIAGL--KIDPEEKQQCQARLTTEWQNYCETIDDLDPGSPIKRTNRLPSVDDELDALPLP 180 Query: 204 ----VIIVG-------GKYDVFSGFDPI----------IRKHTCR-CLRSMAHLIGGALL 241 +G K D + + +++ R CL + G +L Sbjct: 181 EGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQWIRRFCL-----MYGASLF 235 Query: 242 FYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 + S K K +L + H +G P + VV+ + + I G D+ KI Sbjct: 236 YTSVKEDKNCDLLYKYLTHRIYGLPF-RTPALVVEKD-AVLIPAGWDNMKKISILYEN 291 >gi|158597036|gb|EDP35273.1| dynein 2 light intermediate chain, putative [Brugia malayi] Length = 140 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 10/126 (7%) Query: 247 MPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQSVERI 304 M L R I + FG+ A ++ D N+PL + G DS IG S+ I Sbjct: 1 MENLISKTRVLISSVVFGTTAS--KTICTDHNKPLSVPCGADSLMDIGAPPFINSSLSLI 58 Query: 305 GATFGMEVPQL-----QLEKQKLKETTD-PAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 GAT ++ K+K E D PA+D KE IDE+ Q+ EL +R Sbjct: 59 GATNPRDLWYEAYLEHFPNKEKHNEREDNPAEDGQHKEPEIDELIEQRTRELEQYIRHKK 118 Query: 359 LRGKFE 364 R E Sbjct: 119 DRAALE 124 >gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938-PA, isoform A [Apis mellifera] Length = 470 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 112/316 (35%), Gaps = 55/316 (17%) Query: 17 MFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINK 76 K+ E E+ ++ + LAE Q + P + ILVLG GKTT I K Sbjct: 15 FHSKKKEDPENKD-NLW--SSILAEVQNSS----SNKLPSNKNILVLGDNESGKTTLIAK 67 Query: 77 FFDREEHATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQL 135 E + + LE+++ + Q +VW L LL + Sbjct: 68 -LQGVEDPKKGS-GLEFAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLRFALNAERFPHT 125 Query: 136 AVILMLDLSQPQRFWTDLECAYKGLRDTAQQM-MEKVTPELREILEQRTVERVGQ----- 189 V+L+ ++ P L+ L D ++ ++ T + L + + + Sbjct: 126 LVMLVAAMTTPWAILDQLQSWAALLGDHIDKLPLDNDTWQRCRQLNVKKWQDYTEPGDEL 185 Query: 190 ----------QNKDSEKLDPLPFP-----------VIIVGGKYDVFSGFDPI-------- 220 +N D + +D LP P V++V K D S + Sbjct: 186 DPGSPLRRTSRNLDDDTMDNLPLPEGVLTTNLGLDVVVVITKTDYMSTLEKEHDYKDEHF 245 Query: 221 --IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDF 277 I++ R CL+ G L + S K K +L + H + P + VV+ Sbjct: 246 DFIQQWIRRFCLQ-----YGAGLFYTSAKEDKNCDLLYKYLTHRIYSLPF-RTPALVVEK 299 Query: 278 NEPLCIWFGTDSWSKI 293 + + I G D+ KI Sbjct: 300 D-AVLIPAGWDNMKKI 314 >gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] Length = 209 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 45/171 (26%), Positives = 68/171 (39%), Gaps = 17/171 (9%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKG---LRDTAQQMMEKVTPELREILEQR 182 VI + D+S+P WT +E K LR+ +M K+ PE LE++ Sbjct: 131 TLVIFVADMSRP---WTVMESLQKWASVLREHIDKM--KIPPEKMRELERK 176 >gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00000001598 [Nasonia vitripennis] Length = 486 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 103/293 (35%), Gaps = 52/293 (17%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGK 103 +++ P + +LVLG GKTT I K E + + LEY++ + Sbjct: 36 AQVQNSSNNKLPSNKNVLVLGDNESGKTTLIAK-LQGVEDPKKGS-GLEYAYIDVRDDYR 93 Query: 104 SPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 Q +VW L LL+ + V+L+ ++ P L+ + L D Sbjct: 94 DDQTRLSVWVLDGDPGHANLLKFALNAKRFPNTLVMLVAAMTTPWALLDQLQFWSRVLGD 153 Query: 163 TAQQMM---EKVTPELREILEQRTVE-----------------RVGQQNKDSEKLDPLPF 202 ++ + ++ +Q + R +N D E +D LP Sbjct: 154 HIDKLASDNDDFKQTWQDCRQQIKKKWQDYTEPGDDLDPGSPLRRTSRNLDDESVDNLPL 213 Query: 203 P-----------VIIVGGKYDVFSGFDPI----------IRKHTCR-CLRSMAHLIGGAL 240 P +++V K D S + +++ R CL+ G L Sbjct: 214 PDGVLTTNLGLDIVVVITKTDYMSTLEKEHDYRDEHFDFMQQWIRRFCLQ-----YGAGL 268 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 + S K K +L + H + P + VV+ + + I G D+ KI Sbjct: 269 FYTSVKEDKNCDLLYKYLTHRIYSLPF-RTPALVVEKD-AVLIPAGWDNMKKI 319 >gi|158602493|gb|EDP38908.1| dynein light intermediate chain, putative [Brugia malayi] Length = 469 Score = 91.7 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 66/349 (18%), Positives = 122/349 (34%), Gaps = 72/349 (20%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + I L+E A TIL LG++ GK+ +N+ ++ E + Sbjct: 23 GNDDERIW--TQILSEVSANGMSNSAPG-----TILFLGNRQSGKSWLLNR-LEKRETSG 74 Query: 86 RPTLALEYSFGRRI---------------GSGKSP---QVMNVWELGSLDNAEQLLEVPM 127 R + ALEY F G+G +P + VW L L++ + Sbjct: 75 RGS-ALEYHFLNVHTDYRDVSYAYQLASAGAGVAPGESVTLPVWVLDGDVAFAPLVKFAL 133 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT----PELREI----- 178 L + VIL + +P L K + D + + +K T + +E+ Sbjct: 134 TA-PLSKSIVILCASMQEPGAVLPSLNKWVKVISDQIENIFDKATVIDARKSQELFWQEY 192 Query: 179 -------LEQRTVERVGQQNKDSEKLDPLPF-----------PVIIVGGKYDVFSGFDPI 220 ++ + + ++ S + LP +++V K D+ Sbjct: 193 VEPLDSSMQSDKIPSMETEHVRSHFVVLLPLEQNILTRNTGAALVVVLTKSDLAHNEMSD 252 Query: 221 IRK-----HTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVV 275 + H + MAH G AL++ S K K +L + H G P + VV Sbjct: 253 EQLDRLQYHVRKF--CMAH--GAALVYTSAKEEKNTALLYKYVVHRVCGMPFT-TPAQVV 307 Query: 276 DFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 D + + + G D+ K+ + + M E+Q +++ Sbjct: 308 DKDS-VFVPAGWDNEKKLDIIKEA-IPDVDHPLAM-----VRERQSMRD 349 >gi|71401049|ref|XP_803244.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70866044|gb|EAN81798.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 112 Score = 91.0 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 15/96 (15%) Query: 282 CIWFGTDSWSKIG-----------DTGAQSVERIGATFGMEVPQLQLEKQKLKE----TT 326 + D+++ IG TG ++R A P Q E + + Sbjct: 1 LVIPSADTFADIGEPAVSDMGGLQSTGDAELDRWKAPLDAMFPAKQSEDRMQNDSFLKRL 60 Query: 327 DPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + GF E +D +R QK +EL + R K Sbjct: 61 YDTGENGFGEPTVDAVRKQKEDELEQYRKSAFKREK 96 >gi|119584836|gb|EAW64432.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_b [Homo sapiens] Length = 224 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 70/195 (35%), Gaps = 45/195 (23%) Query: 138 ILMLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE------- 180 +L++D+S+P L+ +R+ ++ +K+ + +E +E Sbjct: 1 MLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPA 60 Query: 181 --QRTVERVGQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPI---------- 220 QR + DS L PV++V K D S + Sbjct: 61 SPQRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDF 120 Query: 221 IRKHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 I+ H + CL+ G AL++ S K K ++ I +G VV + Sbjct: 121 IQSHIRKFCLQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKD 173 Query: 280 PLCIWFGTDSWSKIG 294 + I G D+ KIG Sbjct: 174 AVFIPAGWDNDKKIG 188 >gi|157863075|gb|ABV90642.1| cytoplasmic dynein light intermediate chain [Tetrahymena thermophila] Length = 457 Score = 90.2 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 49/303 (16%), Positives = 101/303 (33%), Gaps = 67/303 (22%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFD---------REEHATRPTL------- 89 L + + + +LVLG++ GK T I+ + R L Sbjct: 17 LNETGQKNKFQNKQVLVLGTRGTGKRTLIDSLHEISQTIYPKIRSNEMQSGKLRIAGSVS 76 Query: 90 ALEYSFGRRIG-SGKSPQV---MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 AL+Y + + + + + QLL + ++ + ++ + +MLDLS+ Sbjct: 77 ALDYVYLNVKNLDDQDEDTMAKLGFYIIDEETQ-SQLLPIVLKQNTVKDTLITIMLDLSE 135 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTV-----------------ERVG 188 P WT +E K + + ++ + L + + R + V Sbjct: 136 P---WTFMEQLDKWI-EMITNHLQSLQINLETLDQMRAKVEKLFRDYKEPVLDSDGKLVK 191 Query: 189 QQN-------------------KDSEKLDPLPFPVIIVGGKYDVF-SGFDPIIRKHTCRC 228 + L P++I+ K D+ D + Sbjct: 192 SDTQISPEEEAELIKLKSSVPLPEGSLTSNLGIPIVILANKSDLIAQSNDQQSQIVL-YY 250 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG-SPAHPFRSHVVDFNEPLCIWFGT 287 LR G +L+F S K + ++ + + H +G + + +D + I G+ Sbjct: 251 LRKYCLQYGASLVFTSSKNQESLEIYYEYMLHTLYGFKNKNKSEIYTID---SIFIPSGS 307 Query: 288 DSW 290 D+ Sbjct: 308 DNL 310 >gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [Caenorhabditis briggsae] gi|39587719|emb|CAE58657.1| Hypothetical protein CBG01826 [Caenorhabditis briggsae] Length = 391 Score = 89.8 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 49/285 (17%), Positives = 96/285 (33%), Gaps = 48/285 (16%) Query: 52 TTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMN-- 109 T T + T++VLG GK++ + + D+ + +++P L Y + Sbjct: 41 TNTNQGSTVIVLGDNRCGKSSLLAR-LDKSDRSSKPKSLLGYRVLHVQNDARDASYAYQL 99 Query: 110 ----------------VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDL 153 VW L ++ LL+ + ++ IL + P L Sbjct: 100 GTAGANLNPSELLQIPVWSLDGNESCASLLKYAL-PATPSEVVFILSASIDNPN-LINSL 157 Query: 154 ECAYKGLRDTAQQMMEKVTPELREILEQRTVE----------------RVGQQNKDSEK- 196 + + AQ+ K + ++R + ++ Sbjct: 158 KRWANVCTEQAQKHFSKEDLKAGRNQQERMWQEYVDPVQSHMSTSVVGSFADEHSLLPLD 217 Query: 197 ----LDPLPFPVIIVGGKYDVFSGF---DPIIRKHTCRCLRSMAHLIGGALLFYSQKMPK 249 ++ ++V K D+ G D K + + LR + +G L+F S K K Sbjct: 218 QGTLIENCGVTFMVVITKSDLVLGKEFTDAQFAKISIQ-LRKLCLSLGATLIFTSTKESK 276 Query: 250 LAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG 294 ++L+ I H FG+ + V + + + G D KI Sbjct: 277 NIQLLQKYIVHRSFGTAFTS--AAQVIERDSIFVPAGWDGEKKID 319 >gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Dictyostelium discoideum AX4] gi|60462801|gb|EAL61001.1| dynein light intermediate chain [Dictyostelium discoideum AX4] Length = 504 Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 57/337 (16%), Positives = 106/337 (31%), Gaps = 82/337 (24%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEY 93 DI G++ E ++R + +LG GK+ ++KF + ++AL Y Sbjct: 10 DIWGQILRESSNKNNYF-----EKRDVAILGDPTSGKSLLLSKFDTVSNVESLKSIALSY 64 Query: 94 SFGRRIGSGKSPQVM---NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFW 150 +F S + N W L + LL+ + ++ VI+ LD SQP W Sbjct: 65 TFSDIYEDDTSEDPVGRINYWSLEGEASQNDLLKFSLNKENIKNCMVIITLDFSQP---W 121 Query: 151 TDLECAYKGL--------------RDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK 196 +E K L ++ + + +K++ + E E T S Sbjct: 122 NLVESLKKWLGILEEHIKSIFKDDKNGFKNLQDKLSIKWHEYEEPTTTAATTTTTTTSNN 181 Query: 197 LDP-----------------------------------------------LPFPVIIVGG 209 ++ L P+++ Sbjct: 182 IENNTNKTSPTTDKIQTNNVQKKKKKKVNISSAEDASVLPPLSENILINNLGVPILVACC 241 Query: 210 KYDVF----SGFD--PIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 K D FD + + + LR + G L++ S + V + I ++ F Sbjct: 242 KSDSVVMLEKDFDYKDELFDYIQQYLRRICLQYGAGLIYTSARKEINCGVTLEYIENILF 301 Query: 264 GSP-AHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 G + D + + G D+ +KI Sbjct: 302 GFELKSKTQLIEKDQ---IFVPAGWDTLAKIQVDFEN 335 >gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT00034450001 [Paramecium tetraurelia strain d4-2] gi|124399480|emb|CAK64972.1| unnamed protein product [Paramecium tetraurelia] Length = 425 Score = 84.8 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 60/288 (20%), Positives = 115/288 (39%), Gaps = 27/288 (9%) Query: 58 RTILVLGSKCVGKTTAINKFFDREEHATRP------TLALEYSFGRRIG----SGKSPQV 107 + +L+LG KC GK + ++ D + T ++Y++ I + Sbjct: 24 KNLLILGRKCSGKRSLLDALADVTKTLKNGIRQKGITPIVDYAYLNLIDLRDPDYNTNAR 83 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 +NV+ L + + LL + ++ V++ LD+ +P WT +E + + M Sbjct: 84 LNVYIL-EEEGQKYLLPQILNHKNIKNTFVVIALDMQEP---WTFMEDLDRWIGVLQDMM 139 Query: 168 ME-KVTPELREILEQRTVERV-----GQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDP-- 219 + +++ E ++ ++ + GQ ++ K L P++++ K D+ D Sbjct: 140 ADLRLSLNELEEMKSNVMQYMSQMDGGQAHEGLLKT-NLGIPLMVMVNKSDILERDDKGK 198 Query: 220 ---IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 + CLR G LLF S K KV+ + + H + P + + Sbjct: 199 DWDQKAEIIQFCLRQFCVNYGATLLFTSVKQKINIKVMYEYVLHRLYNMPFETSQHKNLS 258 Query: 277 FNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 E L I G D + I T + + VP +QL+K +KE Sbjct: 259 DFESLFIPLGQDDINIIKSTF-TKLANNAIKYEESVPIVQLKKNLVKE 305 >gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] gi|21615437|emb|CAC42262.2| Hypothetical protein C39E9.14b [Caenorhabditis elegans] gi|21684779|emb|CAD37351.1| Hypothetical protein C39E9.14b [Caenorhabditis elegans] Length = 441 Score = 84.4 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 95/291 (32%), Gaps = 46/291 (15%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGK 103 + L + T T + T++VLG GK++ +++ D+ + +P L Y Sbjct: 33 RELLASKKTNTNQGSTVIVLGDNRSGKSSLLSR-LDKSDRTVKPKSLLGYRVL--HVQND 89 Query: 104 SPQVMNVWELG-SLDNA--EQLLEVPM----------------RTHGLQQLAVILMLDLS 144 + ++LG + N +LL++P+ + IL + Sbjct: 90 ARDASYAYQLGTAGANLNPSELLQIPVWSLDGNAACASLLKHALPATPAEAIFILTASID 149 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVE----------------RVG 188 P L+ + AQ+ K + +++ + Sbjct: 150 NPN-LIHSLKRWANVCTEQAQKHFTKEDLKAGRSQQEKMWQEYVDPVQSQMSTSVVGSFA 208 Query: 189 QQNKDSEK-----LDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFY 243 ++ + ++V K D+ F LR +G L+F Sbjct: 209 DEHNLLPLDQGTLTENCGVTFMVVITKSDLGKEFTDAQFAKISIQLRKFCLSLGATLVFT 268 Query: 244 SQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG 294 S K K ++L+ I H FG+ + V E + + G D KI Sbjct: 269 SAKETKNIQLLQKYIVHRSFGTAFTS--AAQVIERESIFVPAGWDGEKKID 317 >gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT00031450001 [Paramecium tetraurelia strain d4-2] gi|124395704|emb|CAK61219.1| unnamed protein product [Paramecium tetraurelia] Length = 435 Score = 82.9 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 115/289 (39%), Gaps = 29/289 (10%) Query: 58 RTILVLGSKCVGKTTAINKFFD-----REEHATRP-TLALEYSFGRRIG----SGKSPQV 107 + +++LG KC GK + ++ + + + T ++Y+F I + Sbjct: 24 KNLVILGRKCSGKRSLLDSLAEITKTHKNAIRQKGITPIVDYAFLNLIDLRDPDYNTNAR 83 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 +NV+ L + + LL + ++ V++ LD+ +P WT +E + + Q M Sbjct: 84 LNVYIL-EEEGQKYLLPQILNHKNIKNTFVVIALDMQEP---WTFMEDLDRWI-SVLQDM 138 Query: 168 MEKVTPELREILEQRTVERV-------GQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDP- 219 M + L E+ E + GQ ++ K L P++++ K D+ D Sbjct: 139 MADLRLSLNELEEMKANVMQYMSQMDGGQAHEGLLKT-NLGIPLMVMVNKSDILERDDKG 197 Query: 220 ----IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVV 275 + CLR G LLF S K KV+ + + H + P + + Sbjct: 198 KDWDQKAEIIQFCLRQFCVNYGATLLFTSVKQKINIKVMYEYVLHRLYNMPFETSQHKNL 257 Query: 276 DFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 E L I G D + I T + + + VP +QL+K +KE Sbjct: 258 SDFESLFIPLGQDDINIIKSTFTKLANGV-IKYEESVPVVQLKKNLVKE 305 >gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] gi|21615436|emb|CAA94342.2| Hypothetical protein C39E9.14a [Caenorhabditis elegans] gi|21684778|emb|CAA97773.2| Hypothetical protein C39E9.14a [Caenorhabditis elegans] Length = 443 Score = 81.7 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 97/293 (33%), Gaps = 48/293 (16%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGK 103 + L + T T + T++VLG GK++ +++ D+ + +P L Y Sbjct: 33 RELLASKKTNTNQGSTVIVLGDNRSGKSSLLSR-LDKSDRTVKPKSLLGYRVL--HVQND 89 Query: 104 SPQVMNVWELG-SLDNA--EQLLEVPM----------------RTHGLQQLAVILMLDLS 144 + ++LG + N +LL++P+ + IL + Sbjct: 90 ARDASYAYQLGTAGANLNPSELLQIPVWSLDGNAACASLLKHALPATPAEAIFILTASID 149 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVE----------------RVG 188 P L+ + AQ+ K + +++ + Sbjct: 150 NPN-LIHSLKRWANVCTEQAQKHFTKEDLKAGRSQQEKMWQEYVDPVQSQMSTSVVGSFA 208 Query: 189 QQNKDSEK-----LDPLPFPVIIVGGKYDVFSGFDPIIRK--HTCRCLRSMAHLIGGALL 241 ++ + ++V K D+ G + + LR +G L+ Sbjct: 209 DEHNLLPLDQGTLTENCGVTFMVVITKSDLVLGKEFTDAQFAKISIQLRKFCLSLGATLV 268 Query: 242 FYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG 294 F S K K ++L+ I H FG+ + V E + + G D KI Sbjct: 269 FTSAKETKNIQLLQKYIVHRSFGTAFTS--AAQVIERESIFVPAGWDGEKKID 319 >gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Coprinopsis cinerea okayama7#130] Length = 513 Score = 80.9 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 63/355 (17%), Positives = 121/355 (34%), Gaps = 77/355 (21%) Query: 21 RTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 R E+ ++ D L + + + + I++LG GK+T + + Sbjct: 5 RPSSPEAPPENLWD---------SILNSVSTSRSIPAKQIILLGQPSTGKSTIASALLQK 55 Query: 81 ---EEHATRPTL--ALEYSFGR------RIGSGKSPQVMNVWELGSLDNAEQLLEVPMRT 129 +E+ + A+ Y F R P + + LL + Sbjct: 56 NVSDENKDDGRIDFAVGYEFADVKDEEGRSSRYLMPSSSHSY--------TNLLPHFVPP 107 Query: 130 HG-LQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVG 188 L V+++LD ++P F +L+ + + D A+ + +RE +R Sbjct: 108 RTALPHTCVVIVLDWTRPWTFIEELQSWLQWVEDWAKGDGSREVEIVREENRERR----- 162 Query: 189 QQNKDSEKLDPLPFPVIIVGGKYDVF--------------SGFDPIIRKH-TCRCLRSMA 233 + + P+I+V K D+ G + R + LR++ Sbjct: 163 ---PGTLTHNASGVPIIVVCSKADLIDDGPEIAAGAMVKGKGGEWEERTDGIMQVLRTIC 219 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAH--------PFRSHVVDFNEP----- 280 G LL+ + L ++LR HL F PA P ++ ++P Sbjct: 220 LKYGAGLLYTTPLPETL-QILRQYALHLLFMPPAPSPGMEAQVPMKNIFPFQHKPNTLDR 278 Query: 281 --LCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + + G DSW KIG + F ++ ++ L+ +PG Sbjct: 279 DHILVPAGWDSWGKIGV--------LREGFDAKLWNE-AWERDLEGDQQSTTEPG 324 >gi|76162568|gb|AAX30491.2| SJCHGC04029 protein [Schistosoma japonicum] Length = 180 Score = 75.9 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 6/134 (4%) Query: 35 IAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYS 94 + L EE A T +T++VLG GKTT I + E + LEY Sbjct: 19 LWSSLLEEVT---HKAAVTLSPSKTLVVLGDDECGKTTLIAR-LQGTEDPKKG-FGLEYC 73 Query: 95 FGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDL 153 + Q +NVW L LL+ + +++ + + +P +L Sbjct: 74 LLDIKDEDRDDQTKLNVWILDGNTVHSHLLKFAINEESFGDCFIMICVSMMEPWNIINNL 133 Query: 154 ECAYKGLRDTAQQM 167 L++ + Sbjct: 134 NKWVGILKEHIDGL 147 >gi|125858836|gb|AAI29880.1| Dync1li1 protein [Mus musculus] Length = 141 Score = 75.2 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 3/102 (2%) Query: 90 ALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 12 GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTLVMLVVDMSKPWT 71 Query: 149 FWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ 190 L+ +R+ ++ K+ PE + +EQ+ + + Sbjct: 72 ALDSLQKWASVVREHVDKL--KIPPEEMKEMEQKLIRDFQEY 111 >gi|146164455|ref|XP_001013126.2| Ras family protein [Tetrahymena thermophila SB210] gi|146145792|gb|EAR92881.2| Ras family protein [Tetrahymena thermophila SB210] Length = 681 Score = 73.2 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 102/306 (33%), Gaps = 70/306 (22%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFD---------REEHATRPTL------- 89 L + + + +LVLG++ GK T I+ + R L Sbjct: 17 LNETGQKNKFQNKQVLVLGTRGTGKRTLIDSLHEISQTIYPKIRSNEMQSGKLRIAGSVS 76 Query: 90 ALEYSFGRRIG-SGKSPQV---MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 AL+Y + + + + + QLL + ++ + ++ + +MLDLS+ Sbjct: 77 ALDYVYLNVKNLDDQDEDTMAKLGFYIIDEETQ-SQLLPIVLKQNTVKDTLITIMLDLSE 135 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTV-----------------ERVG 188 P WT +E K + + ++ + L + + R + V Sbjct: 136 P---WTFMEQLDKWI-EMITNHLQSLQINLETLDQMRAKVEKLFRDYKEPVLDSDGKLVK 191 Query: 189 QQ-----NKDSEKLDP-LPFPV----------------IIVGGKYDVF-SGFDPIIRKHT 225 +++E + P+ + K D+ D + Sbjct: 192 SDTQISPEEEAELIKLKSSVPLPEGSLTSNLVYKETYRFLNQIKSDLIAQSNDQQSQIVL 251 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG-SPAHPFRSHVVDFNEPLCIW 284 LR G +L+F S K + ++ + + H +G + + +D + I Sbjct: 252 -YYLRKYCLQYGASLVFTSSKNQESLEIYYEYMLHTLYGFKNKNKSEIYTID---SIFIP 307 Query: 285 FGTDSW 290 G+D+ Sbjct: 308 SGSDNL 313 >gi|134106957|ref|XP_777791.1| hypothetical protein CNBA4890 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260489|gb|EAL23144.1| hypothetical protein CNBA4890 [Cryptococcus neoformans var. neoformans B-3501A] Length = 610 Score = 72.8 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 50/320 (15%), Positives = 101/320 (31%), Gaps = 88/320 (27%) Query: 58 RTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFG----------RRIG------ 100 + +++L + G+T +++ R++ + +P ++ Y G RR G Sbjct: 58 KNVILLSERNHGRTHLLSQLTSSRKKKSAKPN-SVFYWNGQPKSTSQPGDRRAGLALGYE 116 Query: 101 --------SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTD 152 S +P + + S + +L+ + L AV+++LD ++P + Sbjct: 117 VIDAGEEYSDSAPPISVFYPPSSHPSLLKLVPSALPPKSLADTAVMIVLDWTKPSSMLQE 176 Query: 153 LECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDS------------------ 194 L + A + E L +R + + S Sbjct: 177 LLNWLSWVEAWA---LGSAEKGEIEELHERLQSYLQHYTEPSATNTGVTAYSGLGPLLPL 233 Query: 195 ----EKLDPLPFPVIIVGGKYDVFSGFDPIIRK----------HTCRCLRSMAHLIGGAL 240 L+ P+I+V K D+ I + LR++ G AL Sbjct: 234 GAGTLTLNSSGIPIIVVCTKADLMDNVAEEIGIKGGRWEERTDWVQQVLRTICLSYGAAL 293 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSP--AHPFRSHVVDF--------------------- 277 + + P +L+ + H + P P + + D Sbjct: 294 FYTAPTRPTTYSLLKSYLLHRLYTVPPSLSPAPTSLTDPSHIAPSPAQGVSTRYPFAHRA 353 Query: 278 ----NEPLCIWFGTDSWSKI 293 + + + G DSW KI Sbjct: 354 NVLDRDAVMVPSGWDSWGKI 373 >gi|123390419|ref|XP_001299882.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121880822|gb|EAX86952.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 192 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 75/225 (33%), Gaps = 44/225 (19%) Query: 60 ILVLGSKCVGKTTAINK-FFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 I ++GS VGKTT + K TL +++ + ++ +W++G + Sbjct: 10 IALIGSSMVGKTTLMVKYCKGTFSEDYIATLGVQFLERQITVKNTPVNIV-IWDIGGQKS 68 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREI 178 +L P+ G +I M DLS + LRD + + P R Sbjct: 69 FMDML--PVCCDGAH--VLIFMFDLSNI--------TSLTALRDWYKSAYD-CNPSAR-- 113 Query: 179 LEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGG 238 V +VG K+D++ + + A IG Sbjct: 114 -------------------------VFLVGNKFDLYFEQTEEEKIAITNKAKKFAQAIGA 148 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCI 283 L++ S K L I FG P D NEP+ I Sbjct: 149 PLMYCSNTHSINVKKLFQLIIAQVFG--LDPRIEQCSDPNEPIVI 191 >gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 446 Score = 70.9 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 46/133 (34%), Gaps = 26/133 (19%) Query: 181 QRTVERVGQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPI----------IR 222 QR + DS L PV++V K D S + I+ Sbjct: 132 QRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQ 191 Query: 223 KHTCR-CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPL 281 H + CL+ G AL++ S K K ++ I +G VV + + Sbjct: 192 SHIRKFCLQ-----YGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAV 244 Query: 282 CIWFGTDSWSKIG 294 I G D+ KIG Sbjct: 245 FIPAGWDNDKKIG 257 >gi|58258773|ref|XP_566799.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57222936|gb|AAW40980.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 588 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 62/235 (26%) Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 + +L+ + L AV+++LD ++P +L + A + E Sbjct: 120 SLLKLVPSALPPKSLADTAVMIVLDWTKPSSMLQELLNWLSWVEAWA---LGSAEKGEIE 176 Query: 178 ILEQRTVERVGQQNKDS----------------------EKLDPLPFPVIIVGGKYDVFS 215 L +R + + S L+ P+I+V K D+ Sbjct: 177 ELHERLQSYLQHYTEPSATNTGVTAYSGLGPLLPLGAGTLTLNSSGIPIIVVCTKADLMD 236 Query: 216 GFDPIIRK----------HTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 I + LR++ G AL + + P +L+ + H + Sbjct: 237 NVAEEIGIKGGRWEERTDWVQQVLRTICLSYGAALFYTAPTRPTTYSLLKSYLLHRLYTV 296 Query: 266 P--AHPFRSHVVDF-------------------------NEPLCIWFGTDSWSKI 293 P P + + D + + + G DSW KI Sbjct: 297 PPSLSPAPTSLTDPSHIAPSPAQGVSTRYPFAHRANVLDRDAVMVPSGWDSWGKI 351 >gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosophila melanogaster] gi|22832093|gb|AAN09291.1| CG1938-PB, isoform B [Drosophila melanogaster] Length = 398 Score = 69.4 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 72/230 (31%), Gaps = 49/230 (21%) Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 VW L LL + VIL + ++QP + L K L + Sbjct: 6 VWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQPWGWLEQLNHWIKVLGQHIDSLQ- 64 Query: 170 KVTPELREILEQR---TVERVGQQNKDSE--------------------------KLDPL 200 + + +E QR T + + D + + L Sbjct: 65 -LDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLLPLTEDALITNL 123 Query: 201 PFPVIIVGGKYDVFSGFDPI----------IRKHTCR-CLRSMAHLIGGALLFYSQKMPK 249 +++V K D + + I++ CLR G +L + S K K Sbjct: 124 GLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLR-----HGTSLFYTSVKEDK 178 Query: 250 LAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 VL + H +G P + VV+ + + I G DS KI Sbjct: 179 NCDVLYKYLTHRIYGLPF-RTPALVVEKD-AVLIPAGWDSLKKISILYEN 226 >gi|124783774|gb|ABN14940.1| dynein light chain-A variant [Taenia asiatica] Length = 277 Score = 69.0 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 26/160 (16%) Query: 196 KLDPLPFPVIIVGGKYDVFSGFD-----PI-----IRKHTCR-CLRSMAHLIGGALLFYS 244 ++ L P+++V K DV + I+ H R CL G AL++ S Sbjct: 22 LINNLGIPLVVVVTKTDVMDDMERKQGMSEEQYDLIQMHIRRFCL-----SYGAALVYVS 76 Query: 245 QKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE-- 302 K K +L++ + H +GSP ++V+D + + I G DS +KIG Q++ Sbjct: 77 AKNGKNCGLLKNYLQHRIYGSPFTQ-NAYVIDKDS-VFIPAGWDSLNKIGLL-EQNLTKY 133 Query: 303 RIGATFGMEVPQLQLEKQKLKETTDP---AKDPGFKELVI 339 R G F VP+ ++Q +P A D + I Sbjct: 134 RPGDDFDKVVPK--PQEQATTANREPAVTAADDQYFLSEI 171 >gi|158290784|ref|XP_312349.4| AGAP002589-PA [Anopheles gambiae str. PEST] gi|157018063|gb|EAA07717.5| AGAP002589-PA [Anopheles gambiae str. PEST] Length = 239 Score = 65.9 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 45/219 (20%) Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM-- 167 +W L + LL+ + ++L L ++ P W ++ ++ + Sbjct: 24 IWTLAADPELNGLLKFALNERSFPHTLILLTLSMAAP---WNWMDQLQYWMKVLDNHIGG 80 Query: 168 -----------MEKVTPELREILE-----------QRTVERVGQQNKDSEKLDPLPFPVI 205 M ++ + + + +R+ E V +D+ L VI Sbjct: 81 LEIDAELKHQCMARLMAKWQSYSDLGSDPLRNSPCKRSNELVPLPLEDAVLTSNLGMEVI 140 Query: 206 IVGGKYDVF-----------SGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVL 254 +V + D FD + + L+ G +L++ + K +L Sbjct: 141 VVVKRSDQMATLRRELNYREEHFDFMQQAIRRAGLQ-----YGASLVYTTVKNNINCDLL 195 Query: 255 RDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 + H +G P S V + + + G DS KI Sbjct: 196 LQYLKHRIYGLPFGT--SASVVEKDAVFVPAGWDSVQKI 232 >gi|45190737|ref|NP_984991.1| AER132Wp [Ashbya gossypii ATCC 10895] gi|44983716|gb|AAS52815.1| AER132Wp [Ashbya gossypii ATCC 10895] Length = 232 Score = 65.5 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 84/225 (37%), Gaps = 48/225 (21%) Query: 62 VLGSKCVGKTTAINKFFDR--EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNA 119 ++G VGKT+ + K+ +E T+ TL + Y R+I G + + ++ +LG Sbjct: 20 LIGDAQVGKTSLMVKYVQNVFDEEYTQ-TLGVHYLE-RKINLGSTDVIFSIMDLGGQREF 77 Query: 120 EQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL 179 +L + + +A+I + DL++P+ T + Y+ R + Sbjct: 78 INMLPLV----SNRAVAIIFLFDLTRPETL-TSIREWYRQARGFNE-------------- 118 Query: 180 EQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC-LRSMAHLIGG 238 P+ +VG KYD+F D ++ + +R A ++G Sbjct: 119 --------------------TAIPL-LVGTKYDLFVNLDVAYQEELSKTSMRY-AQVMGA 156 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCI 283 L+F S + + I F D +PL I Sbjct: 157 PLVFCSTASSINVQKIFKVIIAKAFNLTLRIPEIK--DMGDPLLI 199 >gi|46135805|ref|XP_389594.1| hypothetical protein FG09418.1 [Gibberella zeae PH-1] Length = 512 Score = 65.5 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 120/333 (36%), Gaps = 63/333 (18%) Query: 57 ERTILVLGSK--------CVGKTTAINKFFDREEHATRPT-LALEYSFGRRIGSGKSPQV 107 E+ ++VLG ++ + DR + AL Y++ + + + + Sbjct: 42 EKNLIVLGGSPEHQRDFLESLSSSEPRRNADRLKIPPIANNFALGYTYYDVLDADQDDTL 101 Query: 108 MNV--WELGSL-DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQ----RFWT---DLECAY 157 V + L L+ + + ++I++LD SQP + WT ++ Sbjct: 102 ARVSLYFLSQASTEFASLVAPLLTPETIPNTSLIILLDWSQPHLWLRQIWTWVQVIQEVL 161 Query: 158 KGLRDTAQQMMEKVTPELREILEQRTVERV---------GQQNKDSEKL------DPLPF 202 K + +ME+V +E + G S L +PL Sbjct: 162 KKVDTDQHALMEEVMSAWKERGRGGAATNLDGTPSATATGSDGDSSLPLGPGEWEEPLGL 221 Query: 203 PVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQ-KMPKLAKVLRDTICHL 261 P+ +V FD + LR++ G +L++ SQ +L ++ H Sbjct: 222 PLCVVCQNAWKEPDFD-----TVLQYLRTVLLRHGASLIYTSQNAPSQLPSLI-----HS 271 Query: 262 GFGSPA----HPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEV--PQ 314 G + HP + +V+D ++ + + DSW KI G E++ ++ ++ P+ Sbjct: 272 TLGITSLLKRHPLKHNVIDRDK-IVVPTNWDSWGKIRVLGGTFDAEQVSNSWSEDISTPR 330 Query: 315 LQ-LEKQKLKETTDPAKDPGFKELVIDEIRSQK 346 + D E ++E R QK Sbjct: 331 ESMRFNDDDQGEVD--------EAELEE-REQK 354 >gi|159106574|gb|EDP45457.1| hypothetical protein MGL_0446 [Malassezia globosa CBS 7966] Length = 436 Score = 65.5 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 58/307 (18%), Positives = 106/307 (34%), Gaps = 58/307 (18%) Query: 32 IQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE---HATRPT 88 DI G L R R + +TI+VLG GK+ + + ++ + T Sbjct: 2 APDIWGDLLR-GARARHAFVS-----KTIVVLGEPSSGKSILVRQLVGSDQARASGPKET 55 Query: 89 LA-LEYSFGRRIGSGKSPQ-------VMNVWELGSLDNAEQLLEV---PMRT-------- 129 L + F + K+ + ++ + + L P++T Sbjct: 56 SGPLGFGFIELSENDKTDESLRTSVYTVHSF----GSSIAATLPYAFPPVQTAPDASAMG 111 Query: 130 --HGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERV 187 H +++ +++LD S+P F L ++ LR+ QQ + E + Sbjct: 112 ALHRMRETIFLIILDWSKPWTFAAQLVAWFRLLRELIQQAYVAGQEHSADTERATMRENL 171 Query: 188 GQQ---NKDSEK-----LDPLPFPVIIVGGKYDVFSGFDPIIRK---------HTCRCLR 230 N D + D L + +V K D D I++ + LR Sbjct: 172 ETHLFSNADDVRPPGMLTDNLGVHIALVCTKADC---LDSAIKERRLSDSQIDSLQQFLR 228 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP----LCIWFG 286 ++A G A+ + LR + H + + + V+ + L + G Sbjct: 229 TVAMCYGAAIFSTTITRASSYDALRAHVRHTLYPDTSEANGTSTVEASTADTRHLLVPAG 288 Query: 287 TDSWSKI 293 DSWSKI Sbjct: 289 WDSWSKI 295 >gi|123456026|ref|XP_001315752.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121898438|gb|EAY03529.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 195 Score = 62.4 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 41/164 (25%) Query: 57 ERTILVLGSKCVGKTTAINKFFDRE-EHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 E I+ +G VG+T I +++ E + +PT+ Y + + +N+W+ Sbjct: 6 EYKIVTIGDHGVGQTCLIMRYYYGEFQENPKPTVGAAYVKV-KAEANNHQVQLNLWDTAG 64 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ P+ AVI+ DL++ +D Q++ + Sbjct: 65 QEKYSNLI--PIYVQNCH--AVIICYDLTE---------------KDQLQKVQAFINTA- 104 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDP 219 ++ P P+++VG K D F G +P Sbjct: 105 ---------------HESC----PPEVPIVVVGTKSDKFEGQNP 129 >gi|117939047|dbj|BAF36677.1| Small G Protein RAB [Pyrsonympha grandis] gi|117939051|dbj|BAF36679.1| Small G Protein RAB [Dinenympha exilis] gi|117939053|dbj|BAF36680.1| Small G Protein RAB [Dinenympha exilis] gi|117939055|dbj|BAF36681.1| Small G Protein RAB [Dinenympha exilis] Length = 187 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 40/161 (24%) Query: 60 ILVLGSKCVGKTTAINK----FFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 +LV+G VGKT+ I + F RE + T+ +++++ + + +W++ Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSRE---YKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + + V R I++ DLS+P G D+ ++ + Sbjct: 61 QERYGNMTRVYYRE----AFGAIIVFDLSRP------------GTLDSVRKWKADID--- 101 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSG 216 +V + D P PV+++ K D+ Sbjct: 102 ---------SKVRLPDPDE-----SPIPVVLMANKCDLIRN 128 >gi|117939057|dbj|BAF36682.1| Small G Protein RAB [Dinenympha exilis] Length = 187 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 40/161 (24%) Query: 60 ILVLGSKCVGKTTAINK----FFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 +LV+G VGKT+ I + F RE + T+ +++++ + + +W++ Sbjct: 4 VLVVGDLGVGKTSLIQRYVYNIFSRE---YKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + + V R I++ DLS+P G D+ ++ + Sbjct: 61 QERYGNMTRVYYRE----AFGAIIVFDLSRP------------GTLDSVRKWKADID--- 101 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSG 216 +V + D P PV+++ K D+ Sbjct: 102 ---------SKVRLPDPDE-----SPIPVVLMANKCDLIRN 128 >gi|117939049|dbj|BAF36678.1| Small G Protein RAB [Pyrsonympha grandis] Length = 183 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 40/161 (24%) Query: 60 ILVLGSKCVGKTTAINK----FFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 +LV+G VGKT+ I + F RE + T+ +++++ + + +W++ Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSRE---YKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + + V R I++ DLS+P G D+ ++ + Sbjct: 61 QERYGNMTRVYYRE----AFGAIIVFDLSRP------------GTLDSVRKWKADID--- 101 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSG 216 +V + D P PV+++ K D+ Sbjct: 102 ---------SKVRLPDPDE-----SPIPVVLMANKCDLIRN 128 >gi|117939059|dbj|BAF36683.1| Small G Protein RAB [Dinenympha exilis] Length = 186 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 40/161 (24%) Query: 60 ILVLGSKCVGKTTAINK----FFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 +LV+G VGKT+ I + F RE + T+ +++++ + + +W++ Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSRE---YKATIGVDFAYKLIPIAEDKVVRLQLWDIAG 60 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + + V R I++ DLS+P G D+ ++ + Sbjct: 61 QERYGNMTRVYYRE----AFGAIIVFDLSRP------------GTLDSVRKWKADID--- 101 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSG 216 +V + D P PV+++ K D+ Sbjct: 102 ---------SKVRLPDPDE-----SPIPVVLMANKCDLIRN 128 >gi|117939061|dbj|BAF36684.1| Small G Protein RAB [Dinenympha exilis] Length = 187 Score = 60.9 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 40/161 (24%) Query: 60 ILVLGSKCVGKTTAINK----FFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 +LV+G VGKT+ I + F RE + T+ +++++ + + +W++ Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSRE---YKATIGVDFAYKLIPIAEDKVVGLQLWDIAG 60 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + + V R I++ DLS+P G D+ ++ + Sbjct: 61 QERYGNMTRVYYRE----AFGAIIVFDLSRP------------GTLDSVRKWKADID--- 101 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSG 216 +V + D P PV+++ K D+ Sbjct: 102 ---------SKVRLPDPDE-----SPIPVVLMANKCDLIRN 128 >gi|117939043|dbj|BAF36675.1| Small G Protein RAB [Pyrsonympha grandis] gi|117939045|dbj|BAF36676.1| Small G Protein RAB [Pyrsonympha grandis] Length = 184 Score = 60.5 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 40/161 (24%) Query: 60 ILVLGSKCVGKTTAINK----FFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 +LV+G VGKT+ I + F RE + T+ +++++ + + +W++ Sbjct: 4 VLVVGDLGVGKTSLIQRYVHNIFSRE---YKTTIGVDFAYKLIPIAEDKVVRLQLWDIAG 60 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + + V R I++ DLS+P G D+ ++ + Sbjct: 61 QERYGNMTRVYYRE----AFGAIIVFDLSRP------------GTLDSVRKWKADID--- 101 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSG 216 +V + D P PV+++ K D+ Sbjct: 102 ---------SKVRLPDPDE-----SPIPVVLMANKCDLIRN 128 >gi|50303633|ref|XP_451758.1| unnamed protein product [Kluyveromyces lactis] gi|49640890|emb|CAH02151.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140] Length = 223 Score = 60.1 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 86/226 (38%), Gaps = 50/226 (22%) Query: 62 VLGSKCVGKTTAINKFFDR--EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNA 119 ++G VGKT+ + K+ +E T+ TL + Y R++ G + + ++ +LG Sbjct: 21 LIGDAQVGKTSLMVKYVQNVFDEEYTQ-TLGVHYLE-RKVVLGSTDVIFSIMDLGGQREF 78 Query: 120 EQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL 179 +L P+ + G +A++ + DL++P+ +++ +Q + Sbjct: 79 INML--PLVSEG--AVAIVFLFDLTRPETL--------NSIKEWYRQARGFNDTAIS--- 123 Query: 180 EQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGA 239 I+VG KYD+F DP +++ R A ++ Sbjct: 124 -------------------------ILVGTKYDLFVDMDPEYQENVSRTAMKYAQVMKSP 158 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPA--HPFRSHVVDFNEPLCI 283 L+F S + + + + F ++ EPL I Sbjct: 159 LIFCSTQSSINVQKIFKVVIAKAFNLTLKVPEYKQIG----EPLLI 200 >gi|123473325|ref|XP_001319851.1| Ras family protein [Trichomonas vaginalis G3] gi|121902644|gb|EAY07628.1| Ras family protein [Trichomonas vaginalis G3] Length = 201 Score = 59.4 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 7/111 (6%) Query: 57 ERTILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 E +++LG VGKT+ I++F ++ +H PT+ + + + V+N+W+ Sbjct: 12 EYKVVMLGDSNVGKTSIIHRFIEKSFDHDYEPTVGASFL-TKVMKVDTDKLVLNIWDTAG 70 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 + + L+ R A IL+ D+ P F T++E L + Sbjct: 71 QERYKSLISTYAR--NAH--AAILVYDVMNPDTF-TNVEKWRDELLKYTKN 116 >gi|124506681|ref|XP_001351938.1| hypothetical protein PFI0315c [Plasmodium falciparum 3D7] gi|23504965|emb|CAD51749.1| hypothetical protein [Plasmodium falciparum 3D7] Length = 837 Score = 58.6 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 54/145 (37%), Gaps = 17/145 (11%) Query: 56 KERTILVLGSKCVGKTTAIN----KFFDREEHATRP-------TLALEYSFGRRIG---S 101 + I++ G+K VGK+ + + +E P L L+Y+ + + Sbjct: 356 ENSHIIIFGNKDVGKSCLVKALQEICINNDEQEDYPFYCNKNRVLPLDYACLKVKNIDEN 415 Query: 102 GKSPQV---MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYK 158 K + ++W L L++ ++ + +++ DL +P +D+ Sbjct: 416 RKVKDIKSNSHIWILQHPSYINSLIKNIKNFKNVENVIILICTDLYKPYNIMSDINSWID 475 Query: 159 GLRDTAQQMMEKVTPELREILEQRT 183 L + + + + L+++ Sbjct: 476 TLYILFEAIHSNTSLKTLNQLKEKM 500 >gi|71018751|ref|XP_759606.1| hypothetical protein UM03459.1 [Ustilago maydis 521] gi|46099364|gb|EAK84597.1| hypothetical protein UM03459.1 [Ustilago maydis 521] Length = 746 Score = 58.6 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 44/134 (32%), Gaps = 37/134 (27%) Query: 196 KLDPLPFPVIIVGGKYDVF------SGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPK 249 D L P+++V K D F + + LR++ G AL + S + Sbjct: 353 LTDNLGIPIVVVCTKADAIARLERDKDFKEEQFDYIQQVLRTICMKYGAALFYTSSVRAQ 412 Query: 250 LAKVLRDTICHLGF-------------GSPAHP-----------------FRSHVVDFNE 279 +LR + H F G+ P +R+ D + Sbjct: 413 SIDILRSYLLHRLFTPSSIGSQQQTDSGNSTAPSAQTSAAAGGVAVFGFGYRASTTD-RD 471 Query: 280 PLCIWFGTDSWSKI 293 L + G DSW KI Sbjct: 472 TLLVPAGWDSWGKI 485 >gi|156842204|ref|XP_001644471.1| hypothetical protein Kpol_520p36 [Vanderwaltozyma polyspora DSM 70294] gi|156115114|gb|EDO16613.1| hypothetical protein Kpol_520p36 [Vanderwaltozyma polyspora DSM 70294] Length = 225 Score = 57.4 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 84/231 (36%), Gaps = 50/231 (21%) Query: 57 ERTILVLGSKCVGKTTAINKFFD---REEHATRPTLALEYSFGRRIGSGKSPQVM-NVWE 112 E I ++G VGKT+ + K+ +E+ TL + F +R S +S ++ ++ + Sbjct: 14 EVQIGLVGDAQVGKTSLMVKYVQNIFNDEYTQ--TLGVN--FLKRKVSVRSTDIVFSILD 69 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 LG +L + + A+I + DL++P+ ++ Y A + ++ Sbjct: 70 LGGQKEFINMLPIA----SIGSSAIIFLFDLTRPETL-NSIKEWY----RQANGLNDQAI 120 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 P I+VG KYD+F D ++ R Sbjct: 121 P-------------------------------ILVGTKYDLFIDLDQSTQEKISRIAMQY 149 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCI 283 A ++ L+F S + + F S + + +PL I Sbjct: 150 AQVMNAPLIFTSTAKSINVQKIFKIALSKIFNLTLTI--SEINEIGDPLLI 198 >gi|119174895|ref|XP_001239770.1| hypothetical protein CIMG_09391 [Coccidioides immitis RS] gi|90298556|gb|EAS28187.1| hypothetical protein CIMG_09391 [Coccidioides immitis RS] Length = 239 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 89/267 (33%), Gaps = 56/267 (20%) Query: 11 HQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILV----LGSK 66 +Q+LQ++ + + S S D G ++ + P + ++++ +G Sbjct: 3 YQQLQQVP-QSSSRPGSGLSSGGDRYGY-SQSHSEQTSRPQSGPPSKNSVVIKVGMVGDA 60 Query: 67 CVGKTTAINKFFDRE-EHATRPTLA---LEYSFGRRIGSGKSPQVMNVWELGSLDNAEQL 122 +GKT+ + K+ + + TL +E + R + ++W+LG + Sbjct: 61 QIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIR----NTEITFSIWDLGGQREFVNM 116 Query: 123 LEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQR 182 L + +A++ M DL++ +++ + + Sbjct: 117 LPLVCND----AVAILFMFDLTRKSTL--------NSIKEWY-----RQGRGFNKTA--- 156 Query: 183 TVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC-RCLRSMAHLIGGALL 241 P+ +VG KYD F F ++ + R A + +L+ Sbjct: 157 -------------------IPL-LVGTKYDHFVNFPREDQEEISIQAKRF-AKAMRASLI 195 Query: 242 FYSQKMPKLAKVLRDTICHLGFGSPAH 268 F S + + + F Sbjct: 196 FSSTSHSINVQKIFKIVLSKAFDLKCT 222 >gi|123491233|ref|XP_001325784.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|62736328|gb|AAX97493.1| small Rab GTPase RabX18 [Trichomonas vaginalis] gi|121908689|gb|EAY13561.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 190 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 43/160 (26%) Query: 60 ILVLGSKCVGKTTAINK-FFDREEHATRPTLALE-YSFGRRIGSGKSPQVMNVWELGSLD 117 ++ LG VGKT I + + ++ T+PTL ++ S R+ + P + VW+ + Sbjct: 5 VIFLGDAGVGKTKVIQRYICGKFDNVTKPTLVMDNASISVRVDNQNVP--LEVWDTAGQE 62 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 ++ +R L +LM D+S +T+++ YK +R + Sbjct: 63 AYRSIVLTYLRNVSL----AVLMFDVSN-NVTFTNVDEWYKLIRAHS------------- 104 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGF 217 D P+I+VG KYD+F Sbjct: 105 -------------TPD--------CPIILVGNKYDLFKDQ 123 >gi|123454517|ref|XP_001315011.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121897675|gb|EAY02788.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 201 Score = 56.7 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 43/174 (24%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFFDRE-EHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 + +E ++++G VGKT+ I KF+ T+ Y + +N+W Sbjct: 2 NSGREFKVVMVGDSGVGKTSLIEKFYTGGFNENQSTTIGSAYVKAHVNLDSDTDCTVNIW 61 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + L+ V +R +I +LDL E A + + +++ Sbjct: 62 DTAGQEKFQSLVPVYLRNAD----GIIFVLDL--------TSEIALQTTDSLYHALSDQI 109 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFS---GFDPIIR 222 +++VG KYD+ + +P R Sbjct: 110 ---------------------------LEGMQLLLVGNKYDLVTTNLDIEPFKR 136 >gi|17542952|ref|NP_501609.1| RAB family member (rab-28) [Caenorhabditis elegans] gi|3880725|emb|CAA21582.1| Hypothetical protein Y11D7A.4 [Caenorhabditis elegans] Length = 248 Score = 55.9 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 48/115 (41%), Gaps = 9/115 (7%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 I+V+G GKT+ +F + + + TL L++ R + ++ VW++G Sbjct: 38 IVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDIGGQSI 97 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 A ++++ + + V L+ D++ + E A L + TP Sbjct: 98 AGEMIDKYLTGANI----VFLVYDVTNSK----SFENAVDWLSVVKKNTKSSETP 144 >gi|123374113|ref|XP_001297704.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121877975|gb|EAX84774.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 195 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 45/169 (26%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 ++ LGS VGKT+ I F + A T+ +++ +G+ P + +W+ + Sbjct: 11 VIFLGSAGVGKTSIIQHFMYSSFNGAYETTIGIDFFMKSIPVNGQ-PVNLQIWDTAGQEQ 69 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREI 178 + L +R + V+L+ D S P + +D ++E Sbjct: 70 FKSLTPGYIREAQV----VVLVYDTSDP--------KTLEATKDWYNSVLE--------- 108 Query: 179 LEQRTVERVGQQNKDSEKLDPLPFP--VIIVGGKYDVFSGFDPIIRKHT 225 L P + +VG K D+ +P K Sbjct: 109 --------------------ILGTPPILFLVGNKIDLGKNVNPQDVKAV 137 >gi|154421140|ref|XP_001583584.1| Ras family protein [Trichomonas vaginalis G3] gi|72536124|gb|AAZ73170.1| small Rab GTPase Rab6b [Trichomonas vaginalis] gi|121917826|gb|EAY22598.1| Ras family protein [Trichomonas vaginalis G3] Length = 218 Score = 54.0 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 9/108 (8%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLD 117 ++ +G+ VGKT+ IN++ +D +PT+ ++ F + + + + +W+ + Sbjct: 8 VVFVGNSAVGKTSIINQYMYDSVSADHQPTVGID--FFAKTVNYEGKSIRMQIWDTAGQE 65 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 L+ +R + I + D++ F DLE +K + D A Sbjct: 66 KFHSLIPSYIRDSTV----AIFVFDITSRSSF-EDLEKWFKMVLDIAN 108 >gi|121713178|ref|XP_001274200.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] gi|119402353|gb|EAW12774.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] Length = 509 Score = 54.0 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 55/284 (19%), Positives = 101/284 (35%), Gaps = 54/284 (19%) Query: 57 ERTILVLG-------------SKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGK 103 E+ +L+LG S +T I + AL Y++ + + + Sbjct: 34 EKNLLILGGTQDTQREFLETLSADTSDSTLIGEKRKGRVPPIANQFALGYTYQDVLDADQ 93 Query: 104 SPQVMNVWE-LGSLDNAE--QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGL 160 + V L S + LL+ + + + V+++LD S P WT + + + Sbjct: 94 EDTLARVSAYLLSEPSLSFAPLLKPLLTPQSVPETLVVILLDWSDP---WTWIRRLREWV 150 Query: 161 R----------DTAQQMMEKVTPELREILE-QRTVERVGQQ-----NKDSEKLDP----- 199 R D + +ME++ E R+ + Q + L P Sbjct: 151 RLLRHVLFSLDDETKIVMEEIMTEWRDRKRGMDSGSAGAQGLTSSGGPVTIPLGPGEWDE 210 Query: 200 -LPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 L PV +V D + + LR++ G +L++ + P LA Sbjct: 211 GLGIPVCVVCQGADKIEKLEKDHGWREEEFDFILQFLRTILLKHGASLIYTT---PFLAN 267 Query: 253 VLRDTI-CHLGFGS--PAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 L+ I LG S + +V+D ++ + + DSW KI Sbjct: 268 SLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVPPNWDSWGKI 310 >gi|154413508|ref|XP_001579784.1| hypothetical protein TVAG_268310 [Trichomonas vaginalis G3] gi|121913994|gb|EAY18798.1| hypothetical protein TVAG_268310 [Trichomonas vaginalis G3] Length = 314 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 10/190 (5%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYS-FGRRIGSGKSPQVMNVWELGSLD 117 ++G GK++ I F + +E +R T EY+ F + +++++E + Sbjct: 24 FFLIGRHGSGKSSLIANFSPEVKELQSRSTFGYEYTDFV-----HDNKYLIHIYEF-NDT 77 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL-R 176 LL + + + +I D++ P TD+ L + Q E T + Sbjct: 78 AYNNLL-FDLIKENIDKSCIIFTFDINHPTTISTDVTNIIAPLYTSLNQFFENTTRQKDL 136 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 E + + S P + VG + LR A Sbjct: 137 EKYYSTICSKDPINHSQSTMKINTYVPTVFVGTFDESLEDLSDPKFDGYMNYLREAAIPY 196 Query: 237 GGALLFYSQK 246 G ++ K Sbjct: 197 GASITLSKSK 206 >gi|123411399|ref|XP_001303883.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121885295|gb|EAX90953.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 193 Score = 53.6 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 8/111 (7%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 T P+ + ++V+G VGKT+ IN + + T+ T+A Y R + + V+N+W Sbjct: 6 TVPEGK-VIVVGCAGVGKTSIINMYTTKSFASDTQSTIAATYVQMRVLTE-RGEVVLNLW 63 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 + + + L+ PM + A I++ DL+ E YK ++D Sbjct: 64 DTAGQERFKSLI--PMYSRN--SSAAIIVTDLTNHDSL-VQGENWYKMVKD 109 >gi|15236081|ref|NP_195699.1| AtRABH1c (Arabidopsis Rab GTPase homolog H1c); GTP binding [Arabidopsis thaliana] gi|13272477|gb|AAK17177.1|AF325109_1 small GTP-binding protein-like [Arabidopsis thaliana] gi|14423430|gb|AAK62397.1|AF386952_1 small GTP-binding protein-like [Arabidopsis thaliana] gi|4490740|emb|CAB38902.1| small GTP-binding protein-like [Arabidopsis thaliana] gi|7271044|emb|CAB80652.1| small GTP-binding protein-like [Arabidopsis thaliana] gi|23197670|gb|AAN15362.1| small GTP-binding protein-like [Arabidopsis thaliana] Length = 214 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 68/148 (45%), Gaps = 8/148 (5%) Query: 51 ATTTPKERT-ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVM 108 A+ +P + ++ LG + VGKT+ I +F +D+ + +PT+ +++ ++ ++ Sbjct: 2 ASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL- 60 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ-QM 167 +W+ + L+ +R + I++ D+S Q F + R+ Q + Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSV----AIVVYDVSNRQTFLNTSKWIEDVHRERGQSNV 116 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSE 195 + + +++E+R V ++K E Sbjct: 117 IIVLVGNKTDLVEKRQVSISEGEDKGKE 144 >gi|39971217|ref|XP_366999.1| hypothetical protein MGG_03075 [Magnaporthe grisea 70-15] gi|149210811|ref|XP_001522780.1| hypothetical protein MGCH7_ch7g878 [Magnaporthe grisea 70-15] gi|86196833|gb|EAQ71471.1| hypothetical protein MGCH7_ch7g878 [Magnaporthe grisea 70-15] gi|145017071|gb|EDK01434.1| hypothetical protein MGG_03075 [Magnaporthe grisea 70-15] Length = 561 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 98/292 (33%), Gaps = 66/292 (22%) Query: 57 ERTILVLGSKCVGKTTAI-------NKFFDREEHATRPT-LALEYSFGRRIGSGKSPQVM 108 E+ +LVLG + + + + D + AL ++ + + + + Sbjct: 43 EKNLLVLGGTVETQRSFLETLSSDFRRTLDTDHIPPVANHFALGNTYYDVLDADQEDILA 102 Query: 109 NVWELGSLD----NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 164 + L SL + LL+ + + V+++LD S P W + + Sbjct: 103 RI-TLYSLTKPSASFSSLLKPLLTPQTIPNTLVVILLDWSHP---WLWMRQLRDWIL-LL 157 Query: 165 QQMMEKVTPELREILEQRT--VERVGQQNKDSEK-------------------------- 196 + ++ ++ E ++ +E+ G+ + Sbjct: 158 RTVLVSLSIEAKDAMEEVMIGWRDRGRGGASTNLDGSGVATAAMASDGGAGSDSVALPLG 217 Query: 197 ----LDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGALLFYSQK 246 D L P+ +V D + + +R++ G +L++ S Sbjct: 218 PGEWEDALGLPLSVVCQNADKIDSLEKRQGWKEEQFDVVMQFMRTVLLKHGASLIYTSTS 277 Query: 247 M-PKLAKVLRDTICHLGFGSPA----HPFRSHVVDFNEPLCIWFGTDSWSKI 293 + +L ++ H G + P + +V+D ++ + + DSW KI Sbjct: 278 VPSQLPSLI-----HSSLGITSLLKRQPLKHNVIDRDK-IVVPPNWDSWGKI 323 >gi|50293691|ref|XP_449257.1| unnamed protein product [Candida glabrata] gi|49528570|emb|CAG62231.1| unnamed protein product [Candida glabrata CBS 138] Length = 254 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 77/210 (36%), Gaps = 46/210 (21%) Query: 62 VLGSKCVGKTTAINKFFDR--EEHATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDN 118 ++G VGKT+ + K+ +E T+ TL + F +R S +S ++ ++ +LG Sbjct: 33 LIGDAQVGKTSLMVKYVQNIFDEEYTQ-TLGVN--FLKRKVSIRSTDIVFSLMDLGGQRE 89 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREI 178 +L + L +IL+ DL++P+ +++ +Q + Sbjct: 90 FINMLPIA----TLGSSVIILLFDLTRPETL--------NSIKEWYRQALG--------- 128 Query: 179 LEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGG 238 L+ P I+VG KYD+F + ++ + A ++ Sbjct: 129 ------------------LNDSAIP-ILVGTKYDLFIDLEEEYQEKVSKTSMKYAQVMDA 169 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAH 268 L+F S + + F Sbjct: 170 PLIFCSTAKSINIQKIFKVALAKIFDLTLT 199 >gi|146075496|ref|XP_001462715.1| small GTP binding protein rab6-like protein [Leishmania infantum JPCM5] gi|134066794|emb|CAM65254.1| small GTP binding protein rab6-like protein [Leishmania infantum] Length = 274 Score = 53.2 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 62/151 (41%), Gaps = 20/151 (13%) Query: 51 ATTTPKERT-ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVM 108 A+++ ++ +++LG + VGKT+ I +F +D + +PT+ +++ + Sbjct: 17 ASSSSMQKHKLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDVRL 76 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL-SQPQRFWTDLECAYKGL------- 160 ++W+ + L+ +R A +++ D+ S+P A+K + Sbjct: 77 HLWDTAGQERFHSLIPSYIRN----SAATVVVYDITSRP-----TFFSAFKWIDEVRSES 127 Query: 161 -RDTAQQMMEKVTPELREILEQRTVERVGQQ 190 D ++ + E E E + + Sbjct: 128 GDDVVIMLVGNKVDQASERREVSAEEAMKKA 158 >gi|146183027|ref|XP_001025689.2| Ras family protein [Tetrahymena thermophila SB210] gi|146143655|gb|EAS05444.2| Ras family protein [Tetrahymena thermophila SB210] Length = 246 Score = 52.8 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 56/138 (40%), Gaps = 13/138 (9%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHAT 85 + SI++I E Q + + ++ +G + VGKT+ IN+F D + Sbjct: 7 NRNKSIKNIKQIEIEMQDQSITKQVKKYK----LVFIGDQSVGKTSIINRFINDSFQGTQ 62 Query: 86 RPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 +PT+ ++ F + + + +W+ + L+ +R A I++ D++ Sbjct: 63 QPTVGID--FVAKTLHLDNKTIRLQLWDTAGQERFRSLIPSYIRDSD----AAIIVYDIT 116 Query: 145 QPQRFWTDLECAYKGLRD 162 F + +R+ Sbjct: 117 NQASF-ASVNKWLDYVRE 133 >gi|156552282|ref|XP_001602002.1| PREDICTED: similar to low-Mr GTP-binding protein Rab31, putative [Nasonia vitripennis] Length = 186 Score = 52.8 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 63/190 (33%), Gaps = 46/190 (24%) Query: 57 ERTILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 E +++LGS+ VGKT+ IN++ + H PT+ F +I VW+ Sbjct: 5 EGKVVLLGSQGVGKTSLINRYINNAFNHQNNPTIG-ASFFTCKINLEDVRIKFQVWDTAG 63 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + + + R A L+ D++Q F T ++ L+ ++ Sbjct: 64 QERFRSMAPMYYRNAN----AAFLVFDITQYNSF-TAIKSWVTELQRNVEE--------- 109 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 P +I+VG K D+ RK R A Sbjct: 110 -------------------------PMVLILVGNKVDL-----SEKRKVDSEECRKYAES 139 Query: 236 IGGALLFYSQ 245 IG S Sbjct: 140 IGATYHEISA 149 >gi|145534728|ref|XP_001453108.1| hypothetical protein GSPATT00019429001 [Paramecium tetraurelia strain d4-2] gi|74831270|emb|CAI39274.1| drg_B82 [Paramecium tetraurelia] gi|124420808|emb|CAK85711.1| unnamed protein product [Paramecium tetraurelia] Length = 211 Score = 52.4 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 62/162 (38%), Gaps = 42/162 (25%) Query: 60 ILVLGSKCVGKTTAINK-FFDREEHATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLD 117 I+V+G + VGKT +N+ ++R E + PT+ +++ ++ V +W++ + Sbjct: 9 IIVVGEQGVGKTCLLNQYCYERFEANSPPTIGCDFT--TKVTQTNGQTVRLQLWDIAGQE 66 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 + ++ +R L +++ D+ P E K Sbjct: 67 KYNAVSKLYVRG----ALGCLIVCDIKDPNSL----EETLK------------------- 99 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDP 219 + + ++N D P+++V K D+ S + Sbjct: 100 ------WKSIIEENSDQNN-----IPIMLVQNKCDLASDDEK 130 >gi|2408103|emb|CAA04846.1| sid3 [Schizosaccharomyces pombe] Length = 199 Score = 52.4 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 69/212 (32%), Gaps = 49/212 (23%) Query: 62 VLGSKCVGKTTAINKFFDR--EEHATRPTLA---LEYSFGRRIGSGKSPQVMNVWELGSL 116 ++G +GKT+ + + +E +T+ + +E + R + ++W+LG Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLVGVNFMEKTISIR----NTEITFSIWDLGGQ 70 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 +L + +A++ M DLS+ +++ +Q + Sbjct: 71 REFVNMLPMVCND----AVAILFMFDLSRKSTL--------NSIKEWYRQARGFNKTAVP 118 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 I++G KYD F F ++ + R A + Sbjct: 119 ----------------------------ILIGTKYDHFMTFPREDQEEITKQARRYAKAM 150 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAH 268 +L+F S + + + F Sbjct: 151 KASLVFCSTSHSINVQKIFKIVLAKVFDLKCT 182 >gi|19114197|ref|NP_593285.1| GTPase Spg1 [Schizosaccharomyces pombe] gi|21542235|sp|P87027|SPG1_SCHPO Septum-promoting GTP-binding protein 1 (GTPase spg1) (Sid3 protein) gi|1935000|emb|CAA72985.1| GTPase [Schizosaccharomyces pombe] gi|9408178|emb|CAB99273.1| GTPase Spg1 [Schizosaccharomyces pombe] Length = 198 Score = 52.4 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 70/212 (33%), Gaps = 50/212 (23%) Query: 62 VLGSKCVGKTTAINKFFDR--EEHATRPTLA---LEYSFGRRIGSGKSPQVMNVWELGSL 116 ++G +GKT+ + + +E +T+ TL +E + R + ++W+LG Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQ-TLGVNFMEKTISIR----NTEITFSIWDLGGQ 69 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 +L + +A++ M DLS+ +++ +Q + Sbjct: 70 REFVNMLPMVCND----AVAILFMFDLSRKSTL--------NSIKEWYRQARGFNKTAVP 117 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 I++G KYD F F ++ + R A + Sbjct: 118 ----------------------------ILIGTKYDHFMTFPREDQEEITKQARRYAKAM 149 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAH 268 +L+F S + + + F Sbjct: 150 KASLVFCSTSHSINVQKIFKIVLAKVFDLKCT 181 >gi|68466093|ref|XP_722821.1| putative ARF-like GTPase [Candida albicans SC5314] gi|68466386|ref|XP_722675.1| putative ARF-like GTPase [Candida albicans SC5314] gi|46444665|gb|EAL03938.1| potential ARF-like GTPase [Candida albicans SC5314] gi|46444821|gb|EAL04093.1| potential ARF-like GTPase [Candida albicans SC5314] Length = 185 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 9/110 (8%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 T KE IL+LG GKTT + + E T+PT+ + +N+W+ Sbjct: 16 GTNKEIRILILGLDGAGKTTILYRLQMGEVVTTKPTIGFNVETLKYKN-----ITLNIWD 70 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 LG + + R + AVI ++D + R T + ++ L++ Sbjct: 71 LGGQTS----IRPYWRCYYSNTSAVIFVVDSTDKDRIDTACKELHQMLKE 116 >gi|82594415|ref|XP_725415.1| dynein light intermediate chain 2, cytosolic [Plasmodium yoelii yoelii str. 17XNL] gi|23480414|gb|EAA16980.1| dynein light intermediate chain 2, cytosolic [Plasmodium yoelii yoelii] Length = 694 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 107/321 (33%), Gaps = 63/321 (19%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAI----------- 74 ++ I+D + ++ + ++ + I++LG+K VGK++ + Sbjct: 223 KNGEEGIKDEQSSVYKKILKKLNIDKNEQVESSHIIILGNKDVGKSSLLKALQKIALEND 282 Query: 75 ---NKFFDREEHATRPTLALEYSFGRRIGSGKSPQV------MNVWELGSLDNAEQLLEV 125 R E P +Y ++ +VW L L++ Sbjct: 283 GEYLDLLYRSEIRVLP---FDYGCLNIKNFEDDKKIHDTQGNSHVWILQHPFYTSLLIKN 339 Query: 126 PMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE----- 180 + ++++ +++ DL +P +++ + +++ ++ L+ Sbjct: 340 LKKIQNIKKIIILICTDLYKPYNIISEINTWVDVMHKIYEELYSNYDIDIVSGLKDELEK 399 Query: 181 -------------------------QRTVERVGQQNKDSEKLD-PLPFPVIIVGGKYDVF 214 ++ ++ V + + + L FP+I V K D + Sbjct: 400 YIYNYKQGKNCEKKENREIDVYSGLEQNIDNVKNEENQKKLIKINLSFPIIFVICKSDGY 459 Query: 215 SGFDPIIRK----HTCRCLRSMAHLIGGALLF--YSQKMPK-LAKVLRDTICHLGFGSPA 267 + + LR++A GA++F K ++L I H + Sbjct: 460 EILNNRTYQGYIDVIISYLRNLAISYQGAIIFCNTINKNELINIELLYKYIMHRLY--DF 517 Query: 268 HPFRSHVVDFNEPLCIWFGTD 288 + ++D E + I G D Sbjct: 518 PFKENEILDCYEKIFIPSGYD 538 >gi|154298912|ref|XP_001549877.1| septum-promoting GTP-binding protein 1 [Botryotinia fuckeliana B05.10] gi|150857608|gb|EDN32800.1| septum-promoting GTP-binding protein 1 [Botryotinia fuckeliana B05.10] Length = 312 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 80/244 (32%), Gaps = 59/244 (24%) Query: 40 AEEQQRLRQLEATTT-------PKERTILV----LGSKCVGKTTAINKFFDRE-EHATRP 87 A ++Q R A+T + ++++ +G +GKT+ + K+ + + Sbjct: 95 AYQEQNSRSSGASTDQQQQQQRGSKNSVVIKVGMVGDAQIGKTSLMVKYVEGSWDEDYIQ 154 Query: 88 TLA---LEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 TL +E + R + ++W+LG +L + +A++ M DL+ Sbjct: 155 TLGVNFMEKTISIR----NTEITFSIWDLGGQREFVNMLPLVCND----AVAILFMFDLT 206 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPV 204 + ++ Y+ R ++ P Sbjct: 207 RKSTL-NSIKEWYRQGRGF------------------------------NKTAIPF---- 231 Query: 205 IIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 +VG KYD F F ++ R A + +L+F S + + + F Sbjct: 232 -LVGTKYDHFVNFPREDQEEISNQARRFAKAMRASLIFSSTSHSINVQKIFKIVLSKAFD 290 Query: 265 SPAH 268 Sbjct: 291 LKCT 294 >gi|71745978|ref|XP_822225.1| small GTP binding protein rab6-like protein [Leishmania major] gi|70799857|gb|AAZ10035.1| small GTP binding protein rab6-like protein [Leishmania major] Length = 274 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 56/141 (39%), Gaps = 19/141 (13%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 +++LG + VGKT+ I +F +D + +PT+ +++ +++W+ + Sbjct: 27 LVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLDDDRDVRLHLWDTAGQER 86 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDL-SQPQRFWTDLECAYKGLR--------DTAQQMME 169 L+ +R A +++ D+ S+P A+K + D ++ Sbjct: 87 FHSLIPSYIRN----SAATVVVYDITSRP-----TFFSAFKWIDEVRSESGADVVIMLVG 137 Query: 170 KVTPELREILEQRTVERVGQQ 190 + E E E + + Sbjct: 138 NKVDQASERREVSAEEAMKKA 158 >gi|146184753|ref|XP_001030061.2| Ras family protein [Tetrahymena thermophila SB210] gi|146142676|gb|EAR82398.2| Ras family protein [Tetrahymena thermophila SB210] Length = 265 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 64/162 (39%), Gaps = 26/162 (16%) Query: 41 EEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRI 99 + R+ + T+ + I+ LG + VGKT I +F +D + PT+ ++ F + Sbjct: 4 NDSSRMTSNFSNTSRVKHKIIFLGDQHVGKTCIIERFMYDVFDEKPHPTVGVD--FLAKT 61 Query: 100 GSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYK 158 + ++W+ + L+ +R +++ D++ + + Sbjct: 62 LHIDDKSIRLSLWDTAGQERFRSLIPSYLRDAT----CAVIVFDVTNKE----SFSNVDR 113 Query: 159 GLRD-------------TAQQMMEKVTPELR-EILEQRTVER 186 ++D A ++ K+T E++ LE++ E Sbjct: 114 WIKDYKDNRGSEAPCVLVANKIDLKLTREVQLADLEKKAKEN 155 >gi|145538097|ref|XP_001454754.1| hypothetical protein GSPATT00020999001 [Paramecium tetraurelia strain d4-2] gi|74833783|emb|CAI39356.1| rab_A54 [Paramecium tetraurelia] gi|124422531|emb|CAK87357.1| unnamed protein product [Paramecium tetraurelia] Length = 196 Score = 51.7 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 53/120 (44%), Gaps = 7/120 (5%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQ 106 + K+ +++LG K VGK++ +F FD+ + T+ Y+ G++ + Sbjct: 19 KSNNPGQKKDIKVVMLGDKAVGKSSIATRFCFDKFQSEYEITIGGVYNSVELTVKGQNLK 78 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 + ++W+ + LL + R + +++ D++Q + + K L + Q+ Sbjct: 79 I-HLWDTAGEEKFRSLLSLYYRDANI----AVIVYDITQ-SESFQSVSTWLKELEEKIQK 132 >gi|145602494|ref|XP_359915.2| conserved hypothetical protein [Magnaporthe grisea 70-15] gi|145010912|gb|EDJ95568.1| conserved hypothetical protein [Magnaporthe grisea 70-15] Length = 252 Score = 51.7 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 67/211 (31%), Gaps = 48/211 (22%) Query: 62 VLGSKCVGKTTAINKFFDRE-EHATRPTLA---LEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++G +GKT+ + K+ + + TL +E + R + ++W+LG Sbjct: 69 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIR----NTEITFSIWDLGGQR 124 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 +L + +A++ M DL++ +++ + + Sbjct: 125 EFVNMLPLVCND----AVAILFMFDLTRKSTL--------NSIKEWY-----RQGRGFNK 167 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIG 237 P I+VG KYD F F ++ R A + Sbjct: 168 TA----------------------IP-ILVGTKYDHFVNFPREDQEEISNQARRFAKAMR 204 Query: 238 GALLFYSQKMPKLAKVLRDTICHLGFGSPAH 268 +L+F S + + + F Sbjct: 205 ASLIFSSTSHSINVQKIFKIVLSKAFDLKCT 235 >gi|115312968|gb|AAI24015.1| Rab12 protein [Xenopus tropicalis] Length = 313 Score = 51.7 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 60/141 (42%), Gaps = 19/141 (13%) Query: 42 EQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIG 100 + R R+ + ++++GS+ VGKT+ + +F D A + T+ +++ + Sbjct: 96 QAARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTV 153 Query: 101 SGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYK 158 + ++ +W+ + + + + +IL+ D+++ + E K Sbjct: 154 ELRGKKIRLQIWDTAGQERFNS-----ITSAYYRSAKGIILVYDITKKE----TFEDLPK 204 Query: 159 GLRDTAQQMMEKVTPELREIL 179 + +M++K E E+L Sbjct: 205 WM-----KMIDKYASEEAELL 220 >gi|29500803|gb|AAO75106.1| ComB [Dictyostelium discoideum] Length = 2107 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 66/167 (39%), Gaps = 39/167 (23%) Query: 60 ILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNA 119 IL++G VGKT+ + +F D + PT+ LE F +GKS ++ +W+ + Sbjct: 10 ILIIGDNGVGKTSLLLRFTDGVFNPNEPTVLLEAKFKSVEVAGKSHKL-QIWDTFGQEKI 68 Query: 120 EQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL 179 L G Q +I++ D S R++ +++ K + E Sbjct: 69 SNLTSSFY--KGAQG--LIIVYDSSN---------------RESFEKITSKWSIEA---- 105 Query: 180 EQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC 226 ++ P+ P+++VG K D+ P + + C Sbjct: 106 ---------------KRYVPVNTPILVVGCKSDLEKKTPPEMVRSFC 137 >gi|115398722|ref|XP_001214950.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191833|gb|EAU33533.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 508 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 112/317 (35%), Gaps = 52/317 (16%) Query: 16 KMFVKRTEGGESATPSIQD-----IAGRLAEEQQRLRQLEATTTPKERTILVLG--SKCV 68 ++ R G ++ PS +D I L + P E+ +L+L S Sbjct: 6 QIPGSRFGAGNNSRPSSKDGPKKNIWSSLLD-----NVANGKRLP-EKNLLILDTLSANP 59 Query: 69 GKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE-LGSLDNAE--QLLEV 125 + ++ AL Y++ + + + + V L S + LL+ Sbjct: 60 SDPSLSDEKRKGRVPPVANQFALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKP 119 Query: 126 PMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR----------DTAQQMMEKVTPEL 175 + + + V+++LD S P WT + + +R D + +ME++ E Sbjct: 120 LLTPQSIPETLVVILLDWSDP---WTWVRRLREWVRLLRHVLVSLDDETKIVMEEMMTEW 176 Query: 176 REILE----QRTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDP------ 219 R+ G + L P L P+ +V D + Sbjct: 177 RDRKRGMDAAGAQGLSGSGGPVTMPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHE 236 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI-CHLGFGS--PAHPFRSHVVD 276 + LR++ G +L++ + P LA L+ I LG S + +V+D Sbjct: 237 EEFDFILQFLRTILLKHGASLIYTT---PFLANSLQSLIHSSLGIHSLLKRQSLKHNVID 293 Query: 277 FNEPLCIWFGTDSWSKI 293 ++ + + DSW KI Sbjct: 294 RDK-ILVPSNWDSWGKI 309 >gi|145542895|ref|XP_001457134.1| hypothetical protein GSPATT00022910001 [Paramecium tetraurelia strain d4-2] gi|74833705|emb|CAI39329.1| rab_B54 [Paramecium tetraurelia] gi|124424949|emb|CAK89737.1| unnamed protein product [Paramecium tetraurelia] Length = 196 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 7/120 (5%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQ 106 + K+ +++LG K VGK++ ++F FD+ + T+ Y+ G++ + Sbjct: 19 KSNTPGQKKDIKVVMLGDKAVGKSSIASRFCFDKFQSEYEITIGGVYNSVDLTVKGQNLK 78 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 + ++W+ + LL + R A I++ D++Q F + K L D Q+ Sbjct: 79 I-HLWDTAGEEKFRSLLSLYYRDAN----AAIIVYDITQSDSF-QSVSTWLKELEDKIQK 132 >gi|157755227|ref|XP_001669957.1| Hypothetical protein CBG15075 [Caenorhabditis briggsae] gi|39598369|emb|CAE69062.1| Hypothetical protein CBG15075 [Caenorhabditis briggsae] Length = 262 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 59/138 (42%), Gaps = 13/138 (9%) Query: 40 AEEQQRLRQLEATTTPKER--TILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFG 96 E+ + + P ++ I+V+G GKT+ +F + + + TL L++ Sbjct: 32 VEQPEEIDDAAGEEEPADKVMKIVVVGDGASGKTSICQRFAKETFDKSYHQTLGLDFFSR 91 Query: 97 RRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI-LMLDLSQPQRFWTDLEC 155 R I G+ ++ VW++G A ++++ L +I L+ D++ + E Sbjct: 92 RVILPGEVQVLVQVWDIGGQSIAGEMID-----KYLMGAHIIFLVYDVTNSK----SFEN 142 Query: 156 AYKGLRDTAQQMMEKVTP 173 A + + + ++ P Sbjct: 143 AADWMNVIRKNLKDEENP 160 >gi|145478533|ref|XP_001425289.1| hypothetical protein GSPATT00028926001 [Paramecium tetraurelia strain d4-2] gi|74833722|emb|CAI39334.1| rab_B46 [Paramecium tetraurelia] gi|124392358|emb|CAK57891.1| unnamed protein product [Paramecium tetraurelia] Length = 197 Score = 51.3 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 10/113 (8%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 I++LG VGKT+ + ++ D PT+ L + + + + + +W+ + Sbjct: 10 IILLGDSNVGKTSILKRYSEDTFSEQQAPTIGLAF-YKKVVERKNIKITLEIWDTAGQEK 68 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 +++ + R AV++ D+S+ + LE A + L + + + Sbjct: 69 FKKIAPIYYRNAQ----AVLICFDVSKSE----TLEGAKRWLEEIDKYLSSDC 113 >gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene family [Xenopus tropicalis] gi|134023906|gb|AAI35942.1| Rab31 protein [Xenopus tropicalis] Length = 194 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 46/194 (23%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ +++F D +H PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVSRFVQDHFDHNISPTIGASFMTKTVPSGNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F L+ K L++ Sbjct: 63 GQERFHSLAPMYYRG----SAAAVIVYDITKQDTF-HTLKKWVKELKEH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 G +N + I G K D+ R+ T + R A Sbjct: 107 -------------GPEN----------IVMAIAGNKCDL-----SDTREVTMKDAREYAE 138 Query: 235 LIGGALLFYSQKMP 248 IG ++ S K Sbjct: 139 SIGAIVVETSAKNA 152 >gi|123403919|ref|XP_001302332.1| Ras family protein [Trichomonas vaginalis G3] gi|121883610|gb|EAX89402.1| Ras family protein [Trichomonas vaginalis G3] Length = 105 Score = 50.9 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 10/101 (9%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 ++ LGS VGKT+ I F + A T+ +++ +G+ P + +W+ + Sbjct: 11 VIFLGSAGVGKTSIIQHFMYSSFNGAYETTIGIDFFMKSIPVNGQ-PVNLQIWDTAGQEQ 69 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKG 159 + L +R + V+L+ D S P+ LE Sbjct: 70 FKSLTPGYIREAQV----VVLVYDTSDPK----TLEATKDW 102 >gi|134024040|gb|AAI35229.1| Rab12 protein [Xenopus tropicalis] Length = 274 Score = 50.9 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 60/141 (42%), Gaps = 19/141 (13%) Query: 42 EQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIG 100 + R R+ + ++++GS+ VGKT+ + +F D A + T+ +++ + Sbjct: 57 QAARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTV 114 Query: 101 SGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYK 158 + ++ +W+ + + + + +IL+ D+++ + E K Sbjct: 115 ELRGKKIRLQIWDTAGQERFNS-----ITSAYYRSAKGIILVYDITKKE----TFEDLPK 165 Query: 159 GLRDTAQQMMEKVTPELREIL 179 + +M++K E E+L Sbjct: 166 WM-----KMIDKYASEEAELL 181 >gi|47225130|emb|CAF98757.1| unnamed protein product [Tetraodon nigroviridis] Length = 204 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 54/140 (38%), Gaps = 15/140 (10%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 IL++G VGK++ + +F D + T+ +++ G ++ +W+ + Sbjct: 11 ILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTLTVDGNKAKLA-IWDTAGQER 69 Query: 119 AEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLR------DTAQQMMEKV 171 L + VIL+ D+++ + F T L+ L D + ++ Sbjct: 70 FRTL-----TPSYYRGAQGVILVYDVTRRETF-TKLDNWLNELETYCTRNDLVKMLVGNK 123 Query: 172 TPELREILEQRTVERVGQQN 191 +E+ + +++ Sbjct: 124 IDRENHEVEKPEGLKFARKH 143 >gi|67536988|ref|XP_662268.1| hypothetical protein AN4664.2 [Aspergillus nidulans FGSC A4] gi|40741516|gb|EAA60706.1| hypothetical protein AN4664.2 [Aspergillus nidulans FGSC A4] Length = 522 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 51/285 (17%), Positives = 107/285 (37%), Gaps = 49/285 (17%) Query: 89 LALEYSFGRRIGSGKSPQVMNVWE-LGSLDNAE--QLLEVPMRTHGLQQLAVILMLDLSQ 145 AL Y++ + + + + V L S + LL+ + + + +V+++LD S Sbjct: 100 FALGYTYLDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTPQSIPETSVVILLDWSD 159 Query: 146 PQRFWTDLECAYKGLRDTA---QQMMEKVTPELREILEQRT-VERVGQQNKDSEKL---- 197 P WT + LR+ + ++ + E + ++E+ R ++ D+ Sbjct: 160 P---WT----WVRRLREWVRLLRHVLVSLDDETKVVMEENMTQWRERKKGIDTSSTGSQA 212 Query: 198 --------------DPLPFPVIIVGGKYDVFSGFD-----PIIR-KHTCRCLRSMAHLIG 237 + L P+ +V D + + +R++ G Sbjct: 213 TSSGSAIIGPGEWDEGLGVPLCVVCQGTDKMEKLERDHGWSEDEFDFIHQFMRTLLVKHG 272 Query: 238 GALLFYSQKMPKLAKVLRDTI-CHLGFGS--PAHPFRSHVVDFNEPLCIWFGTDSWSKIG 294 +L++ P A L + LG S +++ ++ ++ + I DSW+KI Sbjct: 273 ASLIYTK---PFHANNLHSVLHSSLGIHSLLKKLSLKANFIERDK-ILIPTNWDSWAKIR 328 Query: 295 DT-GAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELV 338 ++E I + +E+ Q E L + D A+D G E Sbjct: 329 VIREGSNLEGISTAWSIEI-QDPPEP--LSDRNDEAQDDGSSEED 370 >gi|118365218|ref|XP_001015830.1| Ras family protein [Tetrahymena thermophila SB210] gi|89297597|gb|EAR95585.1| Ras family protein [Tetrahymena thermophila SB210] Length = 227 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 13/121 (10%) Query: 49 LEATTTPKERT-ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGS-GKSP 105 TT P + I+ LG + VGKT+ IN+F +D + +PT+ ++ F + Sbjct: 2 QNTTTGPVVKFKIVFLGDQSVGKTSIINRFIYDNFTGSEQPTVGID--FICKTLQMDNKT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + L+ +R A I++ D++ K + + + Sbjct: 60 LRLQLWDTAGQERFKSLIPSYIRDSN----AAIIVYDITNQN----SFSNVTKWVEEVKE 111 Query: 166 Q 166 + Sbjct: 112 E 112 >gi|156390336|ref|XP_001635227.1| predicted protein [Nematostella vectensis] gi|156222318|gb|EDO43164.1| predicted protein [Nematostella vectensis] Length = 225 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 6/127 (4%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKS 104 + T+T + +++G GKT+ ++ + E + T+ L++ R + G Sbjct: 2 SDSEDETSTEHQLKFVLIGDGAAGKTSLCIRYTQENFEQTYKQTIGLDFFLKRIVLPGNV 61 Query: 105 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 164 + VW++G Q+L+ + A++L+ D++ F +LE Y+ + A Sbjct: 62 HVTIQVWDIGGQTLGGQMLDKYI----FGAHAILLVYDVTNQSSF-DNLEDWYETAKKVA 116 Query: 165 QQMMEKV 171 ++ K+ Sbjct: 117 EKQGGKM 123 >gi|156390340|ref|XP_001635229.1| predicted protein [Nematostella vectensis] gi|156222320|gb|EDO43166.1| predicted protein [Nematostella vectensis] Length = 225 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 57/127 (44%), Gaps = 6/127 (4%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKS 104 + T+T + +++G GKT+ ++ + E + T+ L++ R + G Sbjct: 2 SDSEDETSTEHQLKFVLIGDGAAGKTSLCIRYTQENFEQTYKQTIGLDFFLKRIVLPGNV 61 Query: 105 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 164 + VW++G Q+L+ + A++L+ D++ F +LE Y+ + A Sbjct: 62 HVTIQVWDIGGQTLGGQMLDKYI----FGAHAILLVYDVTNQSSF-DNLEDWYETAKKVA 116 Query: 165 QQMMEKV 171 ++ K+ Sbjct: 117 EKQGGKM 123 >gi|17551732|ref|NP_499178.1| ARF-Like family member (arl-5) [Caenorhabditis elegans] gi|461531|sp|P34212|ARL5_CAEEL ADP-ribosylation factor-like protein 5 gi|3881699|emb|CAA80185.1| Hypothetical protein ZK632.8 [Caenorhabditis elegans] Length = 178 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 52/140 (37%), Gaps = 30/140 (21%) Query: 60 ILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMN------VWEL 113 I+V+G GKTT + + +++ T+PT+ +V +W++ Sbjct: 20 IIVVGLDNAGKTTILYNYVTKDQVETKPTIG-----------SNVEEVSYRNLDFVIWDI 68 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 G ++ + T+ +Q VI+++D S R +++ M++ Sbjct: 69 GGQESLRK----SWSTYYVQTDVVIVVIDSSDTTRIPI--------MKEQLHNMLQHEDL 116 Query: 174 ELREIL-EQRTVERVGQQNK 192 IL + G N Sbjct: 117 ARAHILVLANKQDLPGAMNP 136 >gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanosoma brucei TREU927] gi|33348344|gb|AAQ15670.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei] gi|62358719|gb|AAX79175.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei] Length = 230 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 I++LG + VGKT+ I +F +D + + T+ +++ + ++ ++ +VW+ + Sbjct: 30 IVLLGDQAVGKTSLITRFMYDTFDQQYQATIGIDFFSKTLHINNRATRL-HVWDTAGQER 88 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR 161 L+ +R A +++ D++ F + +R Sbjct: 89 FRSLIPSYIRN----SAATVVVYDITSRSSFLSTF-KWIDEVR 126 >gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens] Length = 217 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 15/129 (11%) Query: 47 RQLEATTTPKERTILV----LGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIG 100 R T ++ + +G VGKT +++F R E H +R T+ +E+S R + Sbjct: 2 RTKMGNGTEEDYNFVFKVVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVM 59 Query: 101 SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKG 159 G + +W+ L+ + + + +L+ DL++ + + +E K Sbjct: 60 LGTAAVKAQIWDTAGLERYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKE 113 Query: 160 LRDTAQQMM 168 L D A+ + Sbjct: 114 LYDHAEATI 122 >gi|85098809|ref|XP_960671.1| hypothetical protein [Neurospora crassa OR74A] gi|38566780|emb|CAE76091.1| related to septum initiation protein sid3 [Neurospora crassa] Length = 314 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 66/211 (31%), Gaps = 48/211 (22%) Query: 62 VLGSKCVGKTTAINKFFDRE-EHATRPTLA---LEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++G +GKT+ + K+ + + TL +E + R + ++W+LG Sbjct: 131 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIR----NTEITFSIWDLGGQR 186 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 +L + +A++ M DL++ +++ + + Sbjct: 187 EFVNMLPLVCND----AVAILFMFDLTRKSTL--------NSIKEWY-----RQGRGFNK 229 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIG 237 P ++VG KYD F ++ R A + Sbjct: 230 TA----------------------IP-VLVGTKYDHFVNLSREEQEEISNQARRFAKAMR 266 Query: 238 GALLFYSQKMPKLAKVLRDTICHLGFGSPAH 268 AL+F S + + + F Sbjct: 267 AALIFSSTSHSINVQKIFKIVLSKAFDLKCT 297 >gi|119479611|ref|XP_001259834.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] gi|119407988|gb|EAW17937.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] Length = 505 Score = 50.5 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 112/315 (35%), Gaps = 56/315 (17%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG-------------SKCVGKT 71 G ++ PS +D + + P E+ +L+LG S Sbjct: 3 GNNSRPSSKDGSKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFIETLSADTSDP 61 Query: 72 TAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE-LGSLDNAE--QLLEVPMR 128 T I++ AL Y++ + + + + V L S + LL+ + Sbjct: 62 TLISEKRRGRLPPVANQFALGYTYHDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLT 121 Query: 129 THGLQQLAVILMLDLSQPQRFWTDLECAYKGLR----------DTAQQMMEKVTPELREI 178 + + V+++LD S P WT + + +R D + +ME++ E ++ Sbjct: 122 PQSVPETLVVILLDWSDP---WTWVRRLREWVRLLRHVLISLDDETKIVMEEIMTEWKD- 177 Query: 179 LEQRTVERVGQQNKDS---EKLDP--------LPFPVIIVGGKYDVFSGFDP------II 221 +R ++ Q S + P L P+ +V D + Sbjct: 178 -RKRGMDSGAQGLASSGGPVTIPPGPGEWDEGLGIPMCVVCQGADKIEKLEKEHGWREEE 236 Query: 222 RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI-CHLGFGS--PAHPFRSHVVDFN 278 + +R++ G +L + + LA L+ I LG S + +V+D + Sbjct: 237 FDFILQFMRTILLKHGASLTYTTT---FLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRD 293 Query: 279 EPLCIWFGTDSWSKI 293 + + + DSW KI Sbjct: 294 K-ILVPPNWDSWGKI 307 >gi|157070013|gb|EAA31435.2| protein TEM1 [Neurospora crassa OR74A] Length = 282 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 66/211 (31%), Gaps = 48/211 (22%) Query: 62 VLGSKCVGKTTAINKFFDRE-EHATRPTLA---LEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++G +GKT+ + K+ + + TL +E + R + ++W+LG Sbjct: 99 MVGDAQIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIR----NTEITFSIWDLGGQR 154 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 +L + +A++ M DL++ +++ + + Sbjct: 155 EFVNMLPLVCND----AVAILFMFDLTRKSTL--------NSIKEWY-----RQGRGFNK 197 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIG 237 P ++VG KYD F ++ R A + Sbjct: 198 TA----------------------IP-VLVGTKYDHFVNLSREEQEEISNQARRFAKAMR 234 Query: 238 GALLFYSQKMPKLAKVLRDTICHLGFGSPAH 268 AL+F S + + + F Sbjct: 235 AALIFSSTSHSINVQKIFKIVLSKAFDLKCT 265 >gi|123493610|ref|XP_001326326.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121909239|gb|EAY14103.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 195 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 50/109 (45%), Gaps = 7/109 (6%) Query: 60 ILVLGSKCVGKTTAINKFFDRE-EHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 I+VLG VGKT+ N++ + + + +PT+ + R + V +W+ + Sbjct: 13 IVVLGDSGVGKTSLANRWINGVWQDSVKPTIGANHQRKRVQIDRNNLDVF-MWDTAGQEQ 71 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 L V R+ AVI++ + + F +E + ++ T+++M Sbjct: 72 FRSLAPVYTRSSS----AVIIVASIIERASF-ESIENWIEIVKSTSEKM 115 >gi|156383598|ref|XP_001632920.1| predicted protein [Nematostella vectensis] gi|156219983|gb|EDO40857.1| predicted protein [Nematostella vectensis] Length = 166 Score = 49.7 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 65/193 (33%), Gaps = 44/193 (22%) Query: 60 ILVLGSKCVGKTTAINK-FFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 I++ G VGK++ I + +R A TL +++ + GK+ + +W+ + Sbjct: 4 IVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYAL-QLWDTAGQER 62 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREI 178 + + R V+L+ D+ E ++ +RD + + E + Sbjct: 63 FRSIAKSYFRKAD----GVLLLYDV--------TCETSFLDVRDWVEAIEESCSK----- 105 Query: 179 LEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC--RCLRSMAHLI 236 P P+++ G K D+ + R +A Sbjct: 106 ----------------------PVPIMLCGNKIDIRQSAAAENKTVITAESGSR-LAKEH 142 Query: 237 GGALLFYSQKMPK 249 G + S K K Sbjct: 143 GALFIETSSKENK 155 >gi|149236742|ref|XP_001524248.1| ADP-ribosylation factor 1 [Lodderomyces elongisporus NRRL YB-4239] gi|146451783|gb|EDK46039.1| ADP-ribosylation factor 1 [Lodderomyces elongisporus NRRL YB-4239] Length = 185 Score = 49.7 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 9/109 (8%) Query: 54 TPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWEL 113 T KE IL+LG GKTT + + E T+PT+ + +N+W+L Sbjct: 17 TNKEIRILILGLDGAGKTTILYRLQMGEVVTTKPTIGFNVETLKYKN-----ITLNIWDL 71 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 G + + R + AVI ++D + R T + + L++ Sbjct: 72 GGQTS----IRPYWRCYYSNTSAVIFVVDSTDKDRIDTACKELHTMLKE 116 >gi|156097140|ref|XP_001614603.1| hypothetical protein PVX_098765 [Plasmodium vivax Salvador I] gi|148803477|gb|EDL44876.1| hypothetical protein, conserved [Plasmodium vivax] Length = 822 Score = 49.7 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 64/180 (35%), Gaps = 24/180 (13%) Query: 38 RLAEEQQRLRQLEATTTPKER-------TILVLGSKCVGKTTAINKF----FDREEHATR 86 A E++ + Q E+ I++LG+K VGK++ + +++ Sbjct: 301 DEAHEKKSIYQNILKKLNMEKNEELESSHIIILGNKDVGKSSLVKSLQEISLQGDKNDGE 360 Query: 87 -------PTLALEYSFGRRIG------SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQ 133 L L+Y+ + + +VW L L++ + ++ Sbjct: 361 VLYQNGGGVLPLDYACLGVKNLEENKKANEVKGSSHVWILQHSSYVGSLIKNLKKFKDIK 420 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 ++ +++ DL +P +++ L + + + E L++ V +D Sbjct: 421 KVIILICTDLYKPYNIMSEINQWIDVLYVIFEHLHSDYSMEELRELKESLQSYVHNYKRD 480 >gi|116194005|ref|XP_001222815.1| hypothetical protein CHGG_06720 [Chaetomium globosum CBS 148.51] gi|88182633|gb|EAQ90101.1| hypothetical protein CHGG_06720 [Chaetomium globosum CBS 148.51] Length = 539 Score = 49.7 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 86/257 (33%), Gaps = 44/257 (17%) Query: 74 INKFFDREE---HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE----QLLEVP 126 + + DR + AL Y++ + + + + + L +L + LL Sbjct: 74 LRRTLDRNASRMPPVANSFALGYTYYDVLDADQEDTLARI-SLYTLTSPSAAFASLLRPL 132 Query: 127 MRTHGLQQLAVILMLDLSQPQRFWTDLECAYKG--LRDTAQQMMEKVTPELREILEQRTV 184 + + ++++LD S+P W + + L T + E + + Sbjct: 133 LTPQSIPNTLIVVLLDWSEP---WKWMRQLREWILLLRTVLVSLSDECEETMKEVMLAWR 189 Query: 185 ER-------------VGQQNKDSEK-------LDPLPFPVIIVGGKYDVFSGFDP----- 219 +R V + + + D L P+ +V + + Sbjct: 190 DRGRGGVTNLDGTAAVPTADGEMDLPVGPGEWTDELGLPLCVVCQNAEKMEYLEKTQSWK 249 Query: 220 -IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPFRSHVVD 276 + LR+ G +L++ + +P L LG S P + +V+D Sbjct: 250 EEEFDVVLQFLRTTLLRHGASLIYTTPSVPSQLPTL--IHSSLGIHSLLKKQPLKHNVID 307 Query: 277 FNEPLCIWFGTDSWSKI 293 ++ + I DSW KI Sbjct: 308 RDK-VVIPPNWDSWGKI 323 >gi|159479896|ref|XP_001698022.1| small rab-related GTPase [Chlamydomonas reinhardtii] gi|158273821|gb|EDO99607.1| small rab-related GTPase [Chlamydomonas reinhardtii] Length = 210 Score = 49.7 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 7/118 (5%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSG 102 + E + + IL+LG VGKT + +F D + T+ ++++ R Sbjct: 1 MAVEMQEGSVDLTLK-ILLLGDSGVGKTCLLTRFAHDSFDDKVASTIGVDFAVKRMSVYD 59 Query: 103 KSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGL 160 K ++ VW+ + L R +IL+ D+S+P E + L Sbjct: 60 KRVKLT-VWDTAGQEKFRTLTSTFYRG----AKGIILVYDVSRPDTLRHLEEQWMREL 112 >gi|159111068|ref|XP_001705767.1| RabF [Giardia lamblia ATCC 50803] gi|45184332|gb|AAL87241.2|AF481766_1 RabF [Giardia intestinalis] gi|157433856|gb|EDO78093.1| RabF [Giardia lamblia ATCC 50803] Length = 278 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 54/133 (40%), Gaps = 8/133 (6%) Query: 38 RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFG 96 R AE + + T + T+L G VGK++ ++F D + + T+ +++ Sbjct: 3 RFAELDESSDEQAPTVRTFKVTVL--GDGSVGKSSICSRFAKDFFATSYKQTIGVDFFSQ 60 Query: 97 RRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECA 156 + N++++G ++L + A+I + DL+ + +E Sbjct: 61 TVCLDDGNKVTFNLYDIGGQSIGSKMLSAYISGTN----ALIFVYDLTNAESLENVVE-W 115 Query: 157 YKGLRDTAQQMME 169 Y R + + M + Sbjct: 116 YAMARRSVKSMKD 128 >gi|110761970|ref|XP_001122072.1| PREDICTED: similar to chrowded CG3870-PA [Apis mellifera] Length = 221 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 7/113 (6%) Query: 57 ERTILVLGSKCVGKTTAINKFFDRE-EHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 E ++ LGS+ VGKT+ I ++ + PT+ F ++ + ++ VW+ Sbjct: 5 EGKVVALGSQGVGKTSIIMRYIGKSCNEHLNPTIG-ASFFTCKLNVENARIMLRVWDTAG 63 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + + R A +L+ DL+Q F ++ LR +++M Sbjct: 64 QERFKSMAPMYYRNAN----AAMLVFDLTQYNTF-AAMKRWVTELRRNVEEVM 111 >gi|118401353|ref|XP_001032997.1| Ras family protein [Tetrahymena thermophila SB210] gi|89287343|gb|EAR85334.1| Ras family protein [Tetrahymena thermophila SB210] Length = 225 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 54/131 (41%), Gaps = 13/131 (9%) Query: 60 ILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLD 117 IL++G VGKT+ +N+F + + + T+ +EYS ++ + ++W+ + Sbjct: 19 ILLIGDSGVGKTSIMNRFTENKFNVEIKSTIGVEYS--KKTMVIDQAVIQASIWDTAGQE 76 Query: 118 NAEQLLEVPMRTHGLQ--QLAVILMLDLSQPQRFWTDLECAYKGLRDTA-QQMMEKVTPE 174 L + +L+ D+++P + + + A + + + Sbjct: 77 RFRSL------AKNYYKGAIGALLVFDVTRPHTLENIQKIWLQEVEQHASKNIKMILIGN 130 Query: 175 LREILEQRTVE 185 ++ +R V+ Sbjct: 131 KSDLTVERIVK 141 >gi|145496208|ref|XP_001434095.1| hypothetical protein GSPATT00035828001 [Paramecium tetraurelia strain d4-2] gi|74833796|emb|CAI39360.1| rab_A46 [Paramecium tetraurelia] gi|124401218|emb|CAK66698.1| unnamed protein product [Paramecium tetraurelia] Length = 197 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 48/109 (44%), Gaps = 10/109 (9%) Query: 60 ILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 I++LG VGK++ + ++ + PT+ L + + + + + +W+ + Sbjct: 10 IILLGDSNVGKSSILKRYSENTFSEQQAPTIGLAF-YKKVVERKNIKITLEIWDTAGQEK 68 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 +++ P+ Q AV++ D+S LE A + L + + + Sbjct: 69 FKKI--APIYYRNAQ--AVLICFDVSNRD----TLEGAKRWLEEIDKYL 109 >gi|47220567|emb|CAG05593.1| unnamed protein product [Tetraodon nigroviridis] Length = 2657 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 7/89 (7%) Query: 60 ILVLGSKCVGKTTAINKF--FDREEHATRPT-LALEYSFGRRIGSGKSPQVMNVWELGSL 116 ++V+G+ GKTT I + R + ++ T + ++ + V+NVW+ Sbjct: 1328 LIVVGNVASGKTTLIQQLMKLKRSQLKSKSTSVGIDVQDWTIKDWDRKKMVLNVWDFSGG 1387 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 + + + L +++ +LS+ Sbjct: 1388 EEFSGSHPHFLTSRAL----YLVVYNLSR 1412 >gi|45201317|ref|NP_986887.1| AGR221Wp [Ashbya gossypii ATCC 10895] gi|44986171|gb|AAS54711.1| AGR221Wp [Ashbya gossypii ATCC 10895] Length = 183 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 9/97 (9%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 KE IL+LG GKTT + + E T+PT+ +NVW+ Sbjct: 14 GVNKELRILILGLDGAGKTTILYRLQVGEVVTTKPTIGFNVE--TLTYRNLK---LNVWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRF 149 LG + + R + AVI ++D + R Sbjct: 69 LGGQTS----IRPYWRCYYANTAAVIFVVDSTDKDRM 101 >gi|74831376|emb|CAI39292.1| rab_C68 [Paramecium tetraurelia] Length = 174 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 11/107 (10%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLD 117 I+++G VGKT +N+F + ++PT+ +E+ F R + VW+ + Sbjct: 13 IIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFF--RHIDIMGKTIKAQVWDTAGQE 70 Query: 118 NAEQLLEVPMRTHGLQ-QLAVILMLDLSQPQRFWTDLECAYKGLRDT 163 + + L ++ D+++ Q F +E + LR+ Sbjct: 71 KFR-----AITYGYYRGALGAMICYDITKEQSFLN-VERWIEELREH 111 >gi|9857537|gb|AAG00892.1|AC064879_10 Similar to ADP-ribosylation factor 1 [Arabidopsis thaliana] Length = 186 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 11/114 (9%) Query: 54 TPKERTILVLGSKCVGKTTAINKFFDREE-HATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 +E I++ G GK++ ++K E T PT+ + + S + WE Sbjct: 14 HQEESRIVLFGLDAAGKSSIMHKLKTGETLTTTMPTIGTDVESVKYKDSN-----LRFWE 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 +G + PM H Q++A ++L++D + R D + + D Q Sbjct: 69 MGGQQCYKW---FPMTKHDFQEIAGLVLVVDSTDRDRI-EDAKDFLNAVIDEIQ 118 >gi|145334994|ref|NP_171745.3| ATARFD1B (ADP-ribosylation factor D1B); GTP binding [Arabidopsis thaliana] Length = 190 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 11/114 (9%) Query: 54 TPKERTILVLGSKCVGKTTAINKFFDREE-HATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 +E I++ G GK++ ++K E T PT+ + + S + WE Sbjct: 14 HQEESRIVLFGLDAAGKSSIMHKLKTGETLTTTMPTIGTDVESVKYKDSN-----LRFWE 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 +G + PM H Q++A ++L++D + R D + + D Q Sbjct: 69 MGGQQCYKW---FPMTKHDFQEIAGLVLVVDSTDRDRI-EDAKDFLNAVIDEIQ 118 >gi|123451581|ref|XP_001313965.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121895946|gb|EAY01113.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 201 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 48/121 (39%), Gaps = 5/121 (4%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKS 104 R TT E ++++G+ VGKTT I+ + + T+A YS+ + Sbjct: 2 SRVKIPTTNKTEIKVILVGNSGVGKTTLISAISQGKFNSDQKSTIAPSYSYLEIKNKKGT 61 Query: 105 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 164 + VW+ + + ++ R + ++ L++ + +E K L + + Sbjct: 62 TSRLQVWDTAGQERYASISQIFYRDSSV----ALVCLEVGDENNINSAIEWEEKVLTEQS 117 Query: 165 Q 165 Sbjct: 118 N 118 >gi|145533477|ref|XP_001452483.1| hypothetical protein GSPATT00002485001 [Paramecium tetraurelia strain d4-2] gi|124420182|emb|CAK85086.1| unnamed protein product [Paramecium tetraurelia] Length = 215 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 11/107 (10%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLD 117 I+++G VGKT +N+F + ++PT+ +E+ F R + VW+ + Sbjct: 13 IIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFF--RHIDIMGKTIKAQVWDTAGQE 70 Query: 118 NAEQLLEVPMRTHGLQ-QLAVILMLDLSQPQRFWTDLECAYKGLRDT 163 + + L ++ D+++ Q F +E + LR+ Sbjct: 71 KFR-----AITYGYYRGALGAMICYDITKEQSFLN-VERWIEELREH 111 >gi|123479672|ref|XP_001322993.1| Ras family protein [Trichomonas vaginalis G3] gi|62736318|gb|AAX97488.1| small Rab GTPase RabX11 [Trichomonas vaginalis] gi|121905849|gb|EAY10770.1| Ras family protein [Trichomonas vaginalis G3] Length = 210 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 59/174 (33%), Gaps = 44/174 (25%) Query: 43 QQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRR--I 99 Q+ ++ +A K I+V+G GKT+ I +F + + T+ ++ F + Sbjct: 2 QEEVQDDDAQKVYK---IIVVGDMGTGKTSMIRRFVEGNFSEFYKITIGVD--FANKIIT 56 Query: 100 GSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKG 159 G + +W++ + + V R + I++ D+++P E Sbjct: 57 ADGVKCDI-QLWDIAGQERFGSMTGVYYRE----SVGAIVVFDITRPS----TFEMTKIW 107 Query: 160 LRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDV 213 + D ++ P +++G K D+ Sbjct: 108 MDDIQAKVQTSAGEA---------------------------VPTLLIGNKIDL 134 >gi|154420093|ref|XP_001583062.1| Ras family protein [Trichomonas vaginalis G3] gi|121917301|gb|EAY22076.1| Ras family protein [Trichomonas vaginalis G3] Length = 200 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 10/104 (9%) Query: 57 ERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 E ++++G VGKT+ IN+F+ D PT+A + + V+N+W+ Sbjct: 16 EFKVVLVGDGYVGKTSIINRFYSDHFSTNEPPTIAASFLPIA-MNKNGKRVVLNIWDTAG 74 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKG 159 + L+ + R +I++ DL+ E A + Sbjct: 75 HEKFHCLVPLYARAAN----TLIVVFDLT--NEM--TFENAKEW 110 >gi|89258433|gb|ABD65440.1| Rab21-like [Suberites domuncula] Length = 235 Score = 49.0 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 59/213 (27%) Query: 57 ERTILVLGSKCVGKTTAINK-FFDREEHATRPTL-ALEYSFGRRIGSGKSPQVMNVWELG 114 E ++VLGS+ VGKT+ + + + + PT+ A ++F + + + +W+ Sbjct: 14 EAKVVVLGSQGVGKTSLVLRHVSNTFTQSVSPTIGASFFTFSMTVTGYRIK--LQLWDTA 71 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + + + R A +++ D+++ E +++ ++ +++ KV Sbjct: 72 GQERFRSMAPMYYRRAN----AALIVYDITR--------EKSFEEAQEWVRELESKVDSN 119 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC-RCLRSMA 233 L + +VG K D+ R+ + + L A Sbjct: 120 LS---------------------------LCVVGNKCDL-----SGEREVSREQGLEF-A 146 Query: 234 HLIGGALLFYSQK-------MPKLAKVLRDTIC 259 H IG +F KV + I Sbjct: 147 HQIGA--MFTETSAAQNSGVKEAFLKVAQGVIS 177 >gi|146417402|ref|XP_001484670.1| hypothetical protein PGUG_02399 [Pichia guilliermondii ATCC 6260] gi|146390143|gb|EDK38301.1| hypothetical protein PGUG_02399 [Pichia guilliermondii ATCC 6260] Length = 185 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 9/110 (8%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 KE IL+LG GKTT + + E T+PT+ + +N+W+ Sbjct: 16 GVNKEIRILILGLDGAGKTTILYRLQMGEVVTTKPTIGFNVETLKYKN-----LTLNIWD 70 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 LG + + R + AVI ++D + +R + + L++ Sbjct: 71 LGGQTS----IRPYWRCYYSNTAAVIFVVDSTDKERIDIACKELHTMLKE 116 >gi|116812567|ref|NP_065120.2| RAB25 [Homo sapiens] gi|109017309|ref|XP_001116371.1| PREDICTED: RAB25, member RAS oncogene family isoform 2 [Macaca mulatta] gi|114560206|ref|XP_001163533.1| PREDICTED: RAB25 isoform 1 [Pan troglodytes] gi|46577696|sp|P57735|RAB25_HUMAN Ras-related protein Rab-25 (CATX-8) gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens] gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens] gi|55663560|emb|CAH72638.1| RAB25, member RAS oncogene family [Homo sapiens] gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens] Length = 213 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 15 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVMLGTAAVKAQIWDTAGLE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 73 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 118 >gi|31980838|ref|NP_058595.2| RAB25, member RAS oncogene family [Mus musculus] gi|46397889|sp|Q9WTL2|RAB25_MOUSE Ras-related protein Rab-25 gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus] gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus] gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus] gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus] Length = 213 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 15 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVMLGTAAVKAQIWDTAGLE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 73 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 118 >gi|9789019|gb|AAF98238.1| unknown [Homo sapiens] Length = 256 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 15 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVMLGTAAVKAQIWDTAGLE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 73 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 118 >gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b [Rattus norvegicus] Length = 213 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 15 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVMLGTAAVKAQIWDTAGLE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 73 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 118 >gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus] gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus] Length = 213 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 15 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVMLGTAAVKAQIWDTAGLE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 73 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 118 >gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp Length = 193 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 28 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVMLGTAAVKAQIWDTAGLE 85 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 86 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 131 >gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus] Length = 235 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 37 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVMLGTAAVKAQIWDTAGLE 94 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 95 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 140 >gi|149751384|ref|XP_001499799.1| PREDICTED: similar to RAB25, member RAS oncogene family [Equus caballus] Length = 213 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 15 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVMLGTAAVKAQIWDTAGLE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 73 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 118 >gi|70935784|ref|XP_738930.1| hypothetical protein PC000669.03.0 [Plasmodium chabaudi chabaudi] gi|56515533|emb|CAH80037.1| conserved hypothetical protein [Plasmodium chabaudi] Length = 373 Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 44/319 (13%), Positives = 98/319 (30%), Gaps = 72/319 (22%) Query: 45 RLRQLEATTTPKERTILVLGSKCVGKTTAINKF----FDREEHATRPT-------LALEY 93 + ++ + I++LG+K VGK++ + + + T L +Y Sbjct: 24 KKLNIDKNDEVENSHIIILGNKDVGKSSLLKSLQKISLEGDGEYTDLLYKNEIRVLPFDY 83 Query: 94 SFGRRIGSGKSPQV------MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQ 147 + ++ +VW L L++ ++++ +++ DL +P Sbjct: 84 GCLNIKNFEDNKKIHDIQGNSHVWILQHPCYTSLLIKNLKNFKNIKKIIILICTDLYKPY 143 Query: 148 RFWTDLECAYKGLRDTAQQMMEKVTPELREILEQR------------------------- 182 +++ + + + E+ L+ Sbjct: 144 NIISEINSWIDVMHKIFEDLYSDYDMEVVGELKNNLETYIYNYKGVEKNGKTGTKEEQHV 203 Query: 183 -------------------TVERVGQQNKDSEKL--DPLPFPVIIVGGKYDVFSGFDPII 221 +V V ++ + KL L FP++ V K D + + Sbjct: 204 TNGVGTHSDFESNKEGSIDSVNNVRKEKEGRAKLVKINLSFPIVFVICKSDGYEILNNRT 263 Query: 222 RK----HTCRCLRSMAHLIGGALLF--YSQKMPK-LAKVLRDTICHLGFGSPAHPFRSHV 274 + LR++A A+LF K ++L + H + + Sbjct: 264 YQGYIDVIISYLRNLAISYQAAILFCNTINKNELINVELLYRYMMHRLY--DFPFKEKEI 321 Query: 275 VDFNEPLCIWFGTDSWSKI 293 +D E + I G D I Sbjct: 322 LDCYEKIFIPSGYDDEELI 340 >gi|29841343|gb|AAP06375.1| similar to NM_130025 putative small GTP-binding protein in Arabidopsis thaliana [Schistosoma japonicum] Length = 211 Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 9/103 (8%) Query: 61 LVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDN 118 + LG VGKT I +F ++ + A + T+ ++ F + V +W+ + Sbjct: 17 VFLGDYGVGKTCIILRFMYETFDRAYKATIGID--FVSKTLCFNEKSVRLQLWDTAGQER 74 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR 161 L+ + I++ D++ F K +R Sbjct: 75 FRSLIPSYI-KDS---FVAIVVYDVTNRDSFIKA-SDWIKEIR 112 >gi|157774367|ref|XP_001665249.1| Hypothetical protein CBG09985 [Caenorhabditis briggsae] gi|39590748|emb|CAE65120.1| Hypothetical protein CBG09985 [Caenorhabditis briggsae] Length = 177 Score = 48.6 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 21/103 (20%) Query: 60 ILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMN------VWEL 113 I+V+G GKTT + + +++ T+PT+ +V +W++ Sbjct: 20 IIVVGLDNAGKTTILYNYVTKDQIETKPTIG-----------SNVEEVSYKNLDFVIWDI 68 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECA 156 G ++ + T+ +Q VI+++D S R E Sbjct: 69 GGQESLRK----SWSTYYVQTDVVIVVIDSSDTTRLPLMKEQL 107 >gi|123471387|ref|XP_001318893.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|62736286|gb|AAX97472.1| small Rab GTPase RabD2 [Trichomonas vaginalis] gi|121901664|gb|EAY06670.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 195 Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 48/115 (41%), Gaps = 10/115 (8%) Query: 55 PKERTILVLGSKCVGKTTAINKFFDRE-EHATRPTLALEYSFGRRIGSGKSPQVMNVWEL 113 P+ +++LG VGKT+ IN+F + + +PT+ + + G + ++ +W+ Sbjct: 3 PEVVKVVLLGDSGVGKTSIINRFMTGKYSESLKPTIGAAFVTKNVVVEGHNLELR-IWDT 61 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + L + R+ + I++ D++ E + + + + Sbjct: 62 AGQEVYRGLAPMYYRSANI----AIIVYDVTNQ----PSYESVDYWVGELKKNLK 108 >gi|50405593|ref|XP_456433.1| hypothetical protein DEHA0A02585g [Debaryomyces hansenii CBS767] gi|49652097|emb|CAG84385.1| unnamed protein product [Debaryomyces hansenii CBS767] Length = 213 Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 56/144 (38%), Gaps = 20/144 (13%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSL 116 I++LG VGKT+ +++F ++ + T T+ + + + + W+ Sbjct: 11 IVILGDSSVGKTSLVHRFTTNKFDEHTANTIGAAFITKEHHSNNNPEKKVKFEIWDTAGQ 70 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + L PM + ++ DLS +E + + +Q+ + + Sbjct: 71 ERYRSL--TPMYYRNAKT--ALVCFDLSN-------MEETFDKAKYWIEQLQ--INANDQ 117 Query: 177 EILEQRTVERVGQQNKDSEKLDPL 200 +I ++ +G +N LDP Sbjct: 118 DI----KIKLIGNKNDIDSLLDPS 137 >gi|1172845|sp|P46629|RAB25_RABIT Ras-related protein Rab-25 gi|436001|gb|AAA31261.1| small GTP-binding protein Length = 213 Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 15 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVLLGTAAVKAQIWDTAGLE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 73 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 118 >gi|126307642|ref|XP_001367187.1| PREDICTED: similar to RAB25, member RAS oncogene family [Monodelphis domestica] Length = 213 Score = 48.6 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 15 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVLLGTAAVKAQIWDTAGLE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 73 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 118 >gi|66812636|ref|XP_640497.1| Rab GTPase domain-containing protein [Dictyostelium discoideum AX4] gi|60468468|gb|EAL66472.1| Rab GTPase domain-containing protein [Dictyostelium discoideum AX4] Length = 2107 Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 62/170 (36%), Gaps = 45/170 (26%) Query: 60 ILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF--GRRIGSGKSPQVMNVWELGSLD 117 IL++G VGKT+ + +F D + PT+ LE F G Q+ Sbjct: 10 ILIIGDNGVGKTSLLLRFTDGVFNPNEPTVLLEAKFKSVEVAGKSHKLQI-------GDT 62 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 ++ + + + + +I++ D S R++ +++ K + E Sbjct: 63 FGQEKIS-NLTSSFYKGAQGLIIVYDSSN---------------RESFEKITSKWSIEA- 105 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC 226 ++ P+ P+++VG K D+ P + + C Sbjct: 106 ------------------KRYVPVNTPILVVGCKSDLEKKTPPEMVRSFC 137 >gi|74833811|emb|CAI39365.1| rab_A32 [Paramecium tetraurelia] Length = 215 Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 52/104 (50%), Gaps = 7/104 (6%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 I+ +G++ VGKT+ I +F +++ + +PT+ +++ K+ ++ +W+ + Sbjct: 16 IVFIGNQAVGKTSIIARFVYEQIPQSHQPTIGIDFLSKCIQVENKTVRL-QLWDTAGQER 74 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 L+ +R A +L D+S Q F D++ + +R+ Sbjct: 75 FRSLIPSYIRD----SHAAVLCYDVSNAQSF-ADIKSWLEYVRE 113 >gi|156371538|ref|XP_001628820.1| predicted protein [Nematostella vectensis] gi|156215806|gb|EDO36757.1| predicted protein [Nematostella vectensis] Length = 241 Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 41/172 (23%) Query: 60 ILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLD 117 +LV+G VGKT+ I ++ + + T+ ++++ + I + ++ + +W++ + Sbjct: 19 VLVIGEYGVGKTSIIRRYTEGYFSPNYKLTIGVDFA-LKIIHWDEKTKINLQLWDVAGHE 77 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 + V + +A I++ DLS+ + K RD Q++M Sbjct: 78 RFGHMTRVYYK----YAIAAIIVFDLSRSA----TFDAILKWYRDVNQKVM--------- 120 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGF--DPIIRKHTCR 227 + P PVII+ K D+ + D C+ Sbjct: 121 ------------------LTNENPIPVIILANKCDL-EDYPVDEEKLDQFCQ 153 >gi|159472783|ref|XP_001694524.1| small rab-related GTPase [Chlamydomonas reinhardtii] gi|158276748|gb|EDP02519.1| small rab-related GTPase [Chlamydomonas reinhardtii] Length = 229 Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 58/156 (37%), Gaps = 19/156 (12%) Query: 39 LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGR 97 L+ E + E ++ +GS VGKT I + F D+ T+ T+ ++ F + Sbjct: 5 LSLETTSISTRE-EVDDHLVKVVFVGSAGVGKTCLIRRLFTDKFSPDTQSTIGCDFHF-K 62 Query: 98 RIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECA 156 R K + +W+ + + + ++ + V+ + D+++ Sbjct: 63 RYRFDKKSVGVTIWDTAGAEKFQ-----AVTSNYYRGAQGVVFVYDVTRRDTLDAIARHW 117 Query: 157 YKGLR------DTAQQMMEKVTPELREILEQRTVER 186 + D + ++ +++E+R V Sbjct: 118 LPEVERYTTYPDAVKMVVG----NKIDMMEERAVSP 149 >gi|145477535|ref|XP_001424790.1| hypothetical protein GSPATT00028427001 [Paramecium tetraurelia strain d4-2] gi|124391856|emb|CAK57392.1| unnamed protein product [Paramecium tetraurelia] Length = 222 Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 52/104 (50%), Gaps = 7/104 (6%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 I+ +G++ VGKT+ I +F +++ + +PT+ +++ K+ ++ +W+ + Sbjct: 16 IVFIGNQAVGKTSIIARFVYEQIPQSHQPTIGIDFLSKCIQVENKTVRL-QLWDTAGQER 74 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 L+ +R A +L D+S Q F D++ + +R+ Sbjct: 75 FRSLIPSYIRD----SHAAVLCYDVSNAQSF-ADIKSWLEYVRE 113 >gi|123234717|emb|CAM17123.1| RAB12, member RAS oncogene family [Mus musculus] Length = 291 Score = 48.2 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 70/163 (42%), Gaps = 24/163 (14%) Query: 20 KRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF- 78 +R GG S+ ++ L+ Q R R+ + ++++GS+ VGKT+ + +F Sbjct: 57 RRPAGG-----SLGAVSPALSGGQARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTD 111 Query: 79 DREEHATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLA- 136 D A + T+ +++ + + ++ +W+ + + + + Sbjct: 112 DTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTAGQERFNS-----ITSAYYRSAKG 164 Query: 137 VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL 179 +IL+ D+++ + + K + +M++K E E+L Sbjct: 165 IILVYDITKKE----TFDDLPKWM-----KMIDKYASEDAELL 198 >gi|46125085|ref|XP_387096.1| conserved hypothetical protein [Gibberella zeae PH-1] Length = 186 Score = 48.2 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 9/103 (8%) Query: 54 TPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWEL 113 + KE IL+LG GKTT + + E T PT+ NVW+L Sbjct: 14 SKKEIRILILGLDNAGKTTLLYRLKVGEVVTTIPTIGFNVESVTYKNLN-----FNVWDL 68 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECA 156 G + + R + AVI ++D + +R T E Sbjct: 69 GGQTS----IRPYWRCYYANTAAVIFVVDSTDIERLHTASEEL 107 >gi|50427459|ref|XP_462342.1| hypothetical protein DEHA0G19613g [Debaryomyces hansenii CBS767] gi|49658012|emb|CAG90848.1| unnamed protein product [Debaryomyces hansenii CBS767] Length = 185 Score = 48.2 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 9/110 (8%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 KE IL+LG GKTT + + E T+PT+ + +N+W+ Sbjct: 16 GINKEIRILILGLDGAGKTTILYRLQMGEVVTTKPTIGFNVETLKYKN-----LTLNIWD 70 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 LG + + R + AVI ++D + +R + + L++ Sbjct: 71 LGGQTS----IRPYWRCYYSNTAAVIFVVDSTDKERIDIACKELHTMLKE 116 >gi|41053575|ref|NP_957140.1| hypothetical protein LOC393819 [Danio rerio] gi|125811388|ref|XP_001331590.1| PREDICTED: hypothetical protein [Danio rerio] gi|38328310|gb|AAH62281.1| Zgc:77751 [Danio rerio] Length = 179 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 25/111 (22%) Query: 54 TPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVM----- 108 +E ++++G GKTT + +F +E T PT+ ++ Sbjct: 13 GDREHKVIIVGLDNAGKTTILYQFLTKEAVQTSPTIG-----------SNVEEIAIKKTR 61 Query: 109 -NVWELGSLDNAEQLLEVPMRTHGLQQLA--VILMLDLSQPQRFWTDLECA 156 VW++G ++ + +IL++D + +R E Sbjct: 62 FLVWDIGGQESLR------ATWNSYYTNTEIIILVVDSTDRERLTVTKEEL 106 >gi|123506780|ref|XP_001329276.1| Ras family protein [Trichomonas vaginalis G3] gi|62736244|gb|AAX97451.1| small Rab GTPase Rab6a [Trichomonas vaginalis] gi|121912229|gb|EAY17053.1| Ras family protein [Trichomonas vaginalis G3] Length = 202 Score = 48.2 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 67/213 (31%), Gaps = 49/213 (23%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR-PTLALEYSFGRRIGSGKSPQV 107 T+TP + I+ +G VGKT+ IN++ T+ ++Y + + P Sbjct: 2 KNITSTPFHK-IIFIGDSSVGKTSIINQYIYNSCTPQYNSTIGIDYL-SKIVNEADKPIQ 59 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 + +W+ + L+ +R+ + +L+ D + ++ ++ Q + Sbjct: 60 LQIWDTAGQEKFHSLIPAYIRSSTI----AVLVYD--------ITCKQSFDNIQTWYQMV 107 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 + P IIVG K S D Sbjct: 108 INNAEPAF-----------------------------IIVGNK----SDLDSERANSIEE 134 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICH 260 + A+ I + S + L D I Sbjct: 135 GKKF-ANQINAKFIETSAITSENISQLFDIIIQ 166 >gi|6319641|ref|NP_009723.1| Arl1p [Saccharomyces cerevisiae] gi|584766|sp|P38116|ARL1_YEAST ADP-ribosylation factor-like protein 1 (Arf-like GTPase 1) gi|24987780|pdb|1MOZ|A Chain A, Adp-Ribosylation Factor-Like 1 (Arl1) From Saccharomyces Cerevisiae gi|24987781|pdb|1MOZ|B Chain B, Adp-Ribosylation Factor-Like 1 (Arl1) From Saccharomyces Cerevisiae gi|536502|emb|CAA85125.1| ARL1 [Saccharomyces cerevisiae] gi|1916287|gb|AAC49875.1| ADP-ribosylation factor-like protein 1 [Saccharomyces cerevisiae] gi|151946554|gb|EDN64776.1| ADP-ribosylation factor-like protein [Saccharomyces cerevisiae YJM789] Length = 183 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 15/103 (14%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALE---YSFGRRIGSGKSPQVMN 109 + KE IL+LG GKTT + + E T+PT+ S+ +N Sbjct: 14 GSNKELRILILGLDGAGKTTILYRLQIGEVVTTKPTIGFNVETLSYKNLK--------LN 65 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTD 152 VW+LG + + R + AVI ++D + R T Sbjct: 66 VWDLGGQTS----IRPYWRCYYADTAAVIFVVDSTDKDRMSTA 104 >gi|123479410|ref|XP_001322863.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121905717|gb|EAY10640.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 195 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 56/159 (35%), Gaps = 39/159 (24%) Query: 55 PKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 P E ++VLG VGK++ + + T +R+ + + P ++N+W+ Sbjct: 8 PPEFKVIVLGDSAVGKSSIVLQISQETFDYQMDTTIGASHVQKRMETPRGPIILNIWDTA 67 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L+ + +R A ++ D++ Q F LE Sbjct: 68 GQERYRSLIPIYLRAAQ----AALICYDVTNRQSFL-SLEHWI----------------- 105 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDV 213 +D +K+ P + IVG K D+ Sbjct: 106 -----------------EDVQKICPSDIHIYIVGNKCDL 127 >gi|126274146|ref|XP_001387436.1| GTP-binding protein of the rab family [Pichia stipitis CBS 6054] gi|126213306|gb|EAZ63413.1| GTP-binding protein of the rab family [Pichia stipitis CBS 6054] Length = 230 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 43/168 (25%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALE-----YSFGRRIGSGKSPQVMNVWEL 113 I++LG VGKT +++F ++ + T T+ Y+ + ++ W+ Sbjct: 14 IVLLGDSSVGKTCLVHRFITNKFDQNTANTIGAAFITKKYTSANKPDRQLKFEI---WDT 70 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 + L PM + ++ D++ E +K + +Q+ Sbjct: 71 AGQERYRSL--TPMYYRNAK--VALVCFDMNN-------FETTFKTAKFWIEQIELNGAT 119 Query: 174 ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPII 221 + + P + +VG K D+F P Sbjct: 120 DASD-----------------------PIEIRLVGNKMDLFDKPQPED 144 >gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila SB210] gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210] Length = 230 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 47/108 (43%), Gaps = 9/108 (8%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 I+++G VGK+ +++F D + T+ +E++ R I + +W+ + Sbjct: 14 IVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFA-TRSIMADNKLIKAQIWDTAGQER 72 Query: 119 AEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 V + + + +L+ D+++ F ++ +RD A+ Sbjct: 73 Y-----VAITSAYYRGAVGALLIYDITKHSSFIN-IQKWLDEIRDHAE 114 >gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis] Length = 207 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 48/103 (46%), Gaps = 7/103 (6%) Query: 60 ILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 ++ LG + VGKT+ I +F +D+ ++ + T+ +++ ++ ++ +W+ + Sbjct: 12 LVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL-QLWDTAGQER 70 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR 161 L+ +R + +++ D++ Q F + +R Sbjct: 71 FRSLIPSYIRDSSV----AVIVFDVANRQSFLNTAR-WIEEVR 108 >gi|106507168|ref|NP_077768.2| RAB12, member RAS oncogene family [Mus musculus] gi|122065941|sp|P35283|RAB12_MOUSE Ras-related protein Rab-12 (Rab-13) gi|112292983|dbj|BAF02869.1| Rab12 [Mus musculus] gi|157170004|gb|AAI52767.1| RAB12, member RAS oncogene family [synthetic construct] Length = 243 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 70/163 (42%), Gaps = 24/163 (14%) Query: 20 KRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF- 78 +R GG S+ ++ L+ Q R R+ + ++++GS+ VGKT+ + +F Sbjct: 9 RRPAGG-----SLGAVSPALSGGQARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTD 63 Query: 79 DREEHATRPTLALEYSFGRRIGSGKSPQVM-NVWELGSLDNAEQLLEVPMRTHGLQQLA- 136 D A + T+ +++ + + ++ +W+ + + + + Sbjct: 64 DTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTAGQERFNS-----ITSAYYRSAKG 116 Query: 137 VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL 179 +IL+ D+++ + + K + +M++K E E+L Sbjct: 117 IILVYDITKKE----TFDDLPKWM-----KMIDKYASEDAELL 150 >gi|62988286|ref|NP_001017936.1| RAB25, member RAS oncogene family [Bos taurus] gi|75069882|sp|Q58DW6|RAB25_BOVIN Ras-related protein Rab-25 gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus] Length = 213 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 15 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVMLGTAAIKAQIWDTAGLE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 73 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 118 >gi|73961577|ref|XP_547540.2| PREDICTED: similar to Ras-related protein Rab-25 (CATX-8) [Canis familiaris] Length = 213 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 15 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVMLGTAAIKAQIWDTAGLE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 73 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 118 >gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus] Length = 213 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +++F R E H +R T+ +E+S R + G + +W+ L+ Sbjct: 15 VVLIGESGVGKTNLLSRF-TRNEFSHDSRTTIGVEFS-TRTVMLGTAAIKAQIWDTAGLE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 + + + +L+ DL++ + + +E K L D A+ + Sbjct: 73 RYR-----AITSAYYRGAVGALLVFDLTK-HQTYAVVERWLKELYDHAEATI 118 >gi|123406273|ref|XP_001302762.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|121884082|gb|EAX89832.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 155 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 69/193 (35%), Gaps = 48/193 (24%) Query: 57 ERTILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 E ++ +G VGKT+ + +F D T+ Y + + SP +N+W+ Sbjct: 7 EFKVVTVGDSGVGKTSLVKRFSDGVFTEGAATTIGAAYVKVDVVIA-NSPICLNIWDTAG 65 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + + L+ + +R+ A I+++D+SQ +D + Sbjct: 66 QERFQSLIPLYLRSAQ----ACIIVVDISQ---------------KDAVSNL-------- 98 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 V +N + + P +++ G K D+ +DP L A Sbjct: 99 ----------NVLFEN--FKDILPQDICLVLAGNKKDLVPDYDPTP-------LLGWADK 139 Query: 236 IGGALLFYSQKMP 248 + +F S K Sbjct: 140 NKMSCIFTSAKSA 152 >gi|145510136|ref|XP_001441001.1| hypothetical protein GSPATT00009876001 [Paramecium tetraurelia strain d4-2] gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia] gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia] Length = 205 Score = 47.8 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 73/209 (34%), Gaps = 59/209 (28%) Query: 60 ILVLGSKCVGKTTAINKFFDREE--HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +N+F R E ++ T+ +E++ I K+ + +W+ + Sbjct: 14 LVLIGDSGVGKTNILNQF-TRGEFLQDSKTTIGVEFASKNVILDDKTIK-AQIWDTAGQE 71 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + + +++ D+++ E K +++ + E P L+ Sbjct: 72 RYR-----AITSAYYRGAVGAMIIYDITKS----LTFENVDKWMKE----LKENADPSLQ 118 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR----CLRSM 232 ++IVG K D +KH + C + Sbjct: 119 ---------------------------IMIVGNKTD---------QKHIRQVATDCAIAY 142 Query: 233 AHLIGGALLFYSQKMPKLA-KVLRDTICH 260 A G A + S K ++ + Sbjct: 143 AQRNGVAFIETSAKDGTNVEDAFKNILQQ 171 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melano... 449 e-124 gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoob... 405 e-111 gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 lig... 398 e-109 gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light inter... 394 e-108 gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain is... 391 e-107 gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain i... 389 e-106 gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light int... 388 e-106 gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermed... 388 e-106 gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] 387 e-106 gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein... 386 e-105 gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein... 385 e-105 gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] 384 e-105 gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermed... 384 e-105 gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 ligh... 382 e-104 gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermed... 373 e-101 gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 ... 372 e-101 gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chai... 369 e-100 gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [S... 361 4e-98 gi|157119433|ref|XP_001653379.1| conserved hypothetical protein ... 360 1e-97 gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] 357 1e-96 gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] 355 2e-96 gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae s... 349 2e-94 gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibencla... 343 1e-92 gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella... 343 1e-92 gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Dan... 337 9e-91 gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Tr... 308 4e-82 gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon n... 306 2e-81 gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated fa... 282 3e-74 gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermed... 281 4e-74 gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Tr... 279 2e-73 gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light inte... 278 5e-73 gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin li... 277 9e-73 gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculu... 276 1e-72 gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermed... 276 1e-72 gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chai... 276 2e-72 gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light ... 276 2e-72 gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermedi... 275 2e-72 gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] 275 2e-72 gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermed... 275 2e-72 gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermed... 274 6e-72 gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermedi... 274 8e-72 gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light int... 274 8e-72 gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermed... 273 9e-72 gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light ... 273 1e-71 gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein li... 273 1e-71 gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 ... 273 2e-71 gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light int... 273 2e-71 gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light ... 272 2e-71 gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A is... 272 3e-71 gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo s... 272 4e-71 gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [... 271 7e-71 gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [G... 270 9e-71 gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light interme... 270 1e-70 gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00... 269 2e-70 gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo s... 269 2e-70 gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light interme... 269 3e-70 gi|146097038|ref|XP_001468017.1| dynein light intermediate chain... 268 3e-70 gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light int... 268 4e-70 gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 ... 267 6e-70 gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [D... 265 3e-69 gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] 264 7e-69 gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light... 263 1e-68 gi|157874331|ref|XP_001685649.1| dynein light intermediate chain... 263 1e-68 gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-interm... 262 2e-68 gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light inter... 262 3e-68 gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light inte... 261 5e-68 gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-interm... 261 5e-68 gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] 261 6e-68 gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] 261 6e-68 gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic,... 261 7e-68 gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 ... 260 8e-68 gi|154343515|ref|XP_001567703.1| dynein light intermediate chain... 260 9e-68 gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon n... 260 1e-67 gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein... 257 7e-67 gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 ligh... 250 2e-64 gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate ... 249 2e-64 gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] 248 3e-64 gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light inte... 248 3e-64 gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon n... 246 2e-63 gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A... 241 6e-62 gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin li... 239 2e-61 gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosoph... 238 3e-61 gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein li... 238 5e-61 gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoob... 236 2e-60 gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [S... 235 3e-60 gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermedia... 235 3e-60 gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, is... 235 3e-60 gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938... 233 1e-59 gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light int... 231 4e-59 gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella... 231 6e-59 gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermedi... 227 8e-58 gi|157128066|ref|XP_001661298.1| dynein light intermediate chain... 226 2e-57 gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_002... 225 4e-57 gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae s... 222 3e-56 gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00... 220 1e-55 gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] 220 1e-55 gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermedi... 209 3e-52 gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermed... 208 7e-52 gi|123415018|ref|XP_001304608.1| conserved hypothetical protein ... 202 3e-50 gi|123423641|ref|XP_001306418.1| conserved hypothetical protein ... 199 3e-49 gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Tr... 197 1e-48 gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Cop... 191 6e-47 gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT0001... 191 7e-47 gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT0000... 188 4e-46 gi|158602493|gb|EDP38908.1| dynein light intermediate chain, put... 188 7e-46 gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT0003... 185 5e-45 gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT0003... 183 1e-44 gi|115398722|ref|XP_001214950.1| conserved hypothetical protein ... 179 3e-43 gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosoph... 178 8e-43 gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain i... 176 1e-42 gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermed... 176 2e-42 gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain fam... 176 3e-42 gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [... 176 3e-42 gi|121713178|ref|XP_001274200.1| dynein light intermediate chain... 175 5e-42 gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain fam... 172 3e-41 gi|119479611|ref|XP_001259834.1| conserved hypothetical protein ... 172 4e-41 gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Di... 170 1e-40 gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] 166 3e-39 gi|134106957|ref|XP_777791.1| hypothetical protein CNBA4890 [Cry... 162 3e-38 gi|115690607|ref|XP_001202918.1| PREDICTED: similar to Dynein, c... 159 2e-37 gi|39971217|ref|XP_366999.1| hypothetical protein MGG_03075 [Mag... 156 2e-36 gi|119584836|gb|EAW64432.1| dynein, cytoplasmic 1, light interme... 156 2e-36 gi|116194005|ref|XP_001222815.1| hypothetical protein CHGG_06720... 156 3e-36 gi|46135805|ref|XP_389594.1| hypothetical protein FG09418.1 [Gib... 154 7e-36 gi|119174895|ref|XP_001239770.1| hypothetical protein CIMG_09391... 153 1e-35 gi|67536988|ref|XP_662268.1| hypothetical protein AN4664.2 [Aspe... 153 3e-35 gi|158290784|ref|XP_312349.4| AGAP002589-PA [Anopheles gambiae s... 152 4e-35 gi|157863075|gb|ABV90642.1| cytoplasmic dynein light intermediat... 151 1e-34 gi|58258773|ref|XP_566799.1| hypothetical protein [Cryptococcus ... 149 3e-34 gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermedi... 144 1e-32 gi|159106574|gb|EDP45457.1| hypothetical protein MGL_0446 [Malas... 143 1e-32 gi|146164455|ref|XP_001013126.2| Ras family protein [Tetrahymena... 136 2e-30 gi|82594415|ref|XP_725415.1| dynein light intermediate chain 2, ... 134 9e-30 gi|70935784|ref|XP_738930.1| hypothetical protein PC000669.03.0 ... 133 1e-29 gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light interme... 130 1e-28 gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene fami... 129 3e-28 gi|15236081|ref|NP_195699.1| AtRABH1c (Arabidopsis Rab GTPase ho... 127 8e-28 gi|156097140|ref|XP_001614603.1| hypothetical protein PVX_098765... 126 3e-27 gi|124783774|gb|ABN14940.1| dynein light chain-A variant [Taenia... 125 4e-27 gi|26341846|dbj|BAC34585.1| unnamed protein product [Mus musculus] 124 8e-27 gi|146075496|ref|XP_001462715.1| small GTP binding protein rab6-... 123 2e-26 gi|71745978|ref|XP_822225.1| small GTP binding protein rab6-like... 123 2e-26 gi|156552282|ref|XP_001602002.1| PREDICTED: similar to low-Mr GT... 122 3e-26 gi|157754295|ref|XP_001669491.1| Hypothetical protein CBG00431 [... 122 5e-26 gi|123234717|emb|CAM17123.1| RAB12, member RAS oncogene family [... 120 2e-25 gi|156371538|ref|XP_001628820.1| predicted protein [Nematostella... 120 2e-25 gi|76162568|gb|AAX30491.2| SJCHGC04029 protein [Schistosoma japo... 120 2e-25 gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japo... 119 4e-25 gi|158597036|gb|EDP35273.1| dynein 2 light intermediate chain, p... 118 5e-25 gi|26252194|gb|AAH40558.1| DYNC2LI1 protein [Homo sapiens] 118 7e-25 gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanos... 117 8e-25 gi|158186685|ref|NP_037149.1| RAB12, member RAS oncogene family ... 117 1e-24 gi|106507168|ref|NP_077768.2| RAB12, member RAS oncogene family ... 117 2e-24 gi|145542895|ref|XP_001457134.1| hypothetical protein GSPATT0002... 117 2e-24 gi|115312968|gb|AAI24015.1| Rab12 protein [Xenopus tropicalis] 117 2e-24 gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis] 116 2e-24 gi|123506780|ref|XP_001329276.1| Ras family protein [Trichomonas... 115 5e-24 gi|89258433|gb|ABD65440.1| Rab21-like [Suberites domuncula] 115 5e-24 gi|134024040|gb|AAI35229.1| Rab12 protein [Xenopus tropicalis] 115 6e-24 gi|123471387|ref|XP_001318893.1| small GTP-binding protein, puta... 114 8e-24 gi|118365218|ref|XP_001015830.1| Ras family protein [Tetrahymena... 114 9e-24 gi|145510136|ref|XP_001441001.1| hypothetical protein GSPATT0000... 114 1e-23 gi|145538097|ref|XP_001454754.1| hypothetical protein GSPATT0002... 114 1e-23 gi|57092883|ref|XP_531798.1| PREDICTED: similar to dynein 2 ligh... 114 1e-23 gi|146183027|ref|XP_001025689.2| Ras family protein [Tetrahymena... 113 2e-23 gi|125858836|gb|AAI29880.1| Dync1li1 protein [Mus musculus] 112 4e-23 gi|154420577|ref|XP_001583303.1| Ras family protein [Trichomonas... 111 7e-23 gi|146184753|ref|XP_001030061.2| Ras family protein [Tetrahymena... 111 1e-22 gi|110761970|ref|XP_001122072.1| PREDICTED: similar to chrowded ... 110 2e-22 gi|154331448|ref|XP_001561542.1| small GTP binding protein rab6-... 110 2e-22 gi|156383598|ref|XP_001632920.1| predicted protein [Nematostella... 109 3e-22 gi|29500803|gb|AAO75106.1| ComB [Dictyostelium discoideum] 109 3e-22 gi|125600315|gb|EAZ39891.1| hypothetical protein OsJ_023374 [Ory... 109 3e-22 gi|125558411|gb|EAZ03947.1| hypothetical protein OsI_025179 [Ory... 109 3e-22 gi|117939057|dbj|BAF36682.1| Small G Protein RAB [Dinenympha exi... 109 3e-22 gi|123374113|ref|XP_001297704.1| small GTP-binding protein, puta... 109 4e-22 gi|47225130|emb|CAF98757.1| unnamed protein product [Tetraodon n... 109 4e-22 gi|117939049|dbj|BAF36678.1| Small G Protein RAB [Pyrsonympha gr... 108 6e-22 gi|117939047|dbj|BAF36677.1| Small G Protein RAB [Pyrsonympha gr... 108 6e-22 gi|154413508|ref|XP_001579784.1| hypothetical protein TVAG_26831... 107 8e-22 gi|117939059|dbj|BAF36683.1| Small G Protein RAB [Dinenympha exi... 107 9e-22 gi|117939061|dbj|BAF36684.1| Small G Protein RAB [Dinenympha exi... 107 1e-21 gi|117939043|dbj|BAF36675.1| Small G Protein RAB [Pyrsonympha gr... 107 1e-21 gi|145533477|ref|XP_001452483.1| hypothetical protein GSPATT0000... 107 2e-21 gi|123454517|ref|XP_001315011.1| small GTP-binding protein, puta... 106 2e-21 gi|154421140|ref|XP_001583584.1| Ras family protein [Trichomonas... 106 2e-21 gi|74831376|emb|CAI39292.1| rab_C68 [Paramecium tetraurelia] 106 3e-21 Sequences not found previously or not previously below threshold: gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150... 174 8e-42 gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus... 158 5e-37 gi|154285758|ref|XP_001543674.1| conserved hypothetical protein ... 146 2e-33 gi|119183788|ref|XP_001242885.1| hypothetical protein CIMG_06781... 145 6e-33 gi|85089469|ref|XP_957965.1| hypothetical protein [Neurospora cr... 130 1e-28 gi|154303178|ref|XP_001551997.1| hypothetical protein BC1G_09609... 127 1e-27 gi|118086786|ref|XP_428301.2| PREDICTED: similar to RAB31, membe... 124 1e-26 gi|19526850|ref|NP_598446.1| Rab31-like [Mus musculus] >gnl|BL_O... 122 3e-26 gi|74140181|dbj|BAE33804.1| unnamed protein product [Mus musculu... 122 3e-26 gi|62900806|sp|Q6GQP4|RAB31_RAT Ras-related protein Rab-31 (GTP-... 122 4e-26 gi|77404176|ref|NP_659562.2| RAB31, member RAS oncogene family [... 122 4e-26 gi|73962207|ref|XP_850610.1| PREDICTED: similar to Ras-related p... 122 4e-26 gi|116004109|ref|NP_001070412.1| RAB31, member RAS oncogene fami... 122 4e-26 gi|114672239|ref|XP_523865.2| PREDICTED: RAB31, member RAS oncog... 122 5e-26 gi|88192998|pdb|2FG5|A Chain A, Crystal Structure Of Human Rab31... 122 5e-26 gi|33589861|ref|NP_006859.2| RAB31, member RAS oncogene family [... 122 5e-26 gi|1457954|gb|AAC50773.1| Rab22b 122 5e-26 gi|54696912|gb|AAV38828.1| RAB31, member RAS oncogene family [sy... 122 5e-26 gi|60654153|gb|AAX29769.1| RAB31 member RAS oncogene family [syn... 122 5e-26 gi|61372802|gb|AAX43915.1| RAB31 member RAS oncogene family [syn... 122 5e-26 gi|62898742|dbj|BAD97225.1| RAB31, member RAS oncogene family va... 122 5e-26 gi|109121541|ref|XP_001096759.1| PREDICTED: similar to RAB31, me... 122 5e-26 gi|149720951|ref|XP_001489577.1| PREDICTED: similar to low-Mr GT... 122 5e-26 gi|119622000|gb|EAX01595.1| RAB31, member RAS oncogene family, i... 121 7e-26 gi|71651576|ref|XP_814463.1| small GTP-binding protein RAB6 [Try... 120 2e-25 gi|7689359|gb|AAF67746.1|AF254800_1 GTP-binding protein Rab0 [Ra... 120 2e-25 gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 1089... 119 2e-25 gi|68066998|ref|XP_675470.1| hypothetical protein PB000846.00.0 ... 119 4e-25 gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ust... 117 1e-24 gi|78057535|gb|ABB17267.1| secretion related GTPase C [Aspergill... 117 1e-24 gi|145251179|ref|XP_001397103.1| hypothetical protein An15g05740... 117 1e-24 gi|71002422|ref|XP_755892.1| RAS small monomeric GTPase Rab6, pu... 117 1e-24 gi|83770344|dbj|BAE60477.1| unnamed protein product [Aspergillus... 117 1e-24 gi|156542630|ref|XP_001604718.1| PREDICTED: similar to rab6 [Nas... 117 2e-24 gi|109091480|ref|XP_001087750.1| PREDICTED: similar to RAS-relat... 116 2e-24 gi|145357850|ref|NP_196588.3| AtRABH1e (Arabidopsis Rab GTPase h... 116 2e-24 gi|82596931|ref|XP_726467.1| hypothetical protein PY00721 [Plasm... 116 2e-24 gi|147225162|emb|CAN13146.1| RAB22A, member RAS oncogene family ... 116 3e-24 gi|68486004|ref|XP_713074.1| putative rab family GTP-binding pro... 116 3e-24 gi|113931342|ref|NP_001039118.1| RAB22A, member RAS oncogene fam... 116 3e-24 gi|50978970|ref|NP_001003208.1| RAS-related protein RAB-22A [Can... 116 4e-24 gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interact... 115 4e-24 gi|109476659|ref|XP_001067187.1| PREDICTED: similar to RAS and E... 115 4e-24 gi|108706608|gb|ABF94403.1| Ras-related protein Rab-6A, putative... 115 4e-24 gi|15227173|ref|NP_179816.1| AtRABH1d (Arabidopsis Rab GTPase ho... 115 4e-24 gi|72384491|gb|AAZ67607.1| 80A08_22 [Brassica rapa subsp. pekine... 115 5e-24 gi|147902647|ref|NP_001090471.1| RAB31, member RAS oncogene fami... 115 5e-24 gi|30583895|gb|AAP36196.1| Homo sapiens RAB22A, member RAS oncog... 115 5e-24 gi|10190714|ref|NP_065724.1| RAS-related protein RAB-22A [Homo s... 115 5e-24 gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] 115 5e-24 gi|149734235|ref|XP_001490105.1| PREDICTED: similar to Rab22a pr... 115 6e-24 gi|68485957|ref|XP_713097.1| putative rab family GTP-binding pro... 115 6e-24 gi|160704321|gb|EAT78701.2| hypothetical protein SNOG_14076 [Pha... 114 7e-24 gi|85002141|gb|ABC68472.1| Rab6A [Marsupenaeus japonicus] 114 7e-24 gi|18568105|gb|AAL75941.1|AF125104_1 RAB22 [Homo sapiens] 114 7e-24 gi|1710019|sp|P51154|RB22A_CANFA Ras-related protein Rab-22A (Ra... 114 7e-24 gi|10636479|emb|CAC10538.1| GTP-binding protein RAB22A [Homo sap... 114 7e-24 gi|115472201|ref|NP_001059699.1| Os07g0496000 [Oryza sativa (jap... 114 7e-24 gi|149030014|gb|EDL85106.1| RAB22A, member RAS oncogene family (... 114 7e-24 gi|126302779|ref|XP_001368849.1| PREDICTED: similar to RAB22A, m... 114 7e-24 gi|56118785|ref|NP_991282.2| RAB22A, member RAS oncogene family ... 114 8e-24 gi|37681919|gb|AAQ97837.1| RAB22A, member RAS oncogene family [D... 114 8e-24 gi|150866330|ref|XP_001385886.2| predicted protein [Pichia stipi... 114 9e-24 gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, m... 114 9e-24 gi|149642869|ref|NP_001092635.1| hypothetical protein LOC617385 ... 114 9e-24 gi|15224916|ref|NP_181989.1| RAB6; GTP binding [Arabidopsis thal... 114 9e-24 gi|623586|gb|AAA74117.1| putative 114 1e-23 gi|147782540|emb|CAN75036.1| hypothetical protein [Vitis vinifer... 114 1e-23 gi|118375516|ref|XP_001020942.1| Ras family protein [Tetrahymena... 114 1e-23 gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlam... 114 1e-23 gi|148747177|ref|NP_077756.2| RAB22A, member RAS oncogene family... 114 1e-23 gi|134118235|ref|XP_772218.1| hypothetical protein CNBM0510 [Cry... 114 1e-23 gi|157069725|gb|EAA28729.2| hypothetical protein NCU09982 [Neuro... 113 1e-23 gi|108706607|gb|ABF94402.1| Ras-related protein Rab-6A, putative... 113 2e-23 gi|145549438|ref|XP_001460398.1| hypothetical protein GSPATT0000... 113 2e-23 gi|62945396|ref|NP_001017427.1| RAS and EF hand domain containin... 113 2e-23 gi|71894915|ref|NP_001026038.1| RAS-related protein RAB-22A [Gal... 113 2e-23 gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Popul... 113 2e-23 gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HO... 113 2e-23 gi|149036251|gb|EDL90910.1| rCG35675, isoform CRA_b [Rattus norv... 113 2e-23 gi|74210028|dbj|BAE21304.1| unnamed protein product [Mus musculus] 113 2e-23 gi|125951222|ref|XP_697248.2| PREDICTED: hypothetical protein [D... 113 2e-23 gi|126652803|ref|XP_001388379.1| Rab7 GTPase, putative [Cryptosp... 113 2e-23 gi|6323642|ref|NP_013713.1| GTPase; GTP-binding protein of the r... 112 2e-23 gi|50311935|ref|XP_455999.1| unnamed protein product [Kluyveromy... 112 2e-23 gi|12852239|dbj|BAB29331.1| unnamed protein product [Mus musculus] 112 3e-23 gi|6759651|gb|AAF27978.1|AF093826_1 GTP binding protein; Rab6 [P... 112 3e-23 gi|46111195|ref|XP_382655.1| conserved hypothetical protein [Gib... 112 3e-23 gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G P... 112 3e-23 gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase 112 3e-23 gi|145349021|ref|XP_001418939.1| predicted protein [Ostreococcus... 112 3e-23 gi|60729663|pir||JC8006 Rab7 protein - sea anemone (Aiptasia pul... 112 3e-23 gi|125836147|ref|XP_001339841.1| PREDICTED: hypothetical protein... 112 3e-23 gi|56118925|ref|NP_001008026.1| RAB7A, member RAS oncogene famil... 112 3e-23 gi|149036685|gb|EDL91303.1| RAB7, member RAS oncogene family, is... 112 4e-23 gi|47087033|ref|NP_998530.1| hypothetical protein LOC406674 [Dan... 112 4e-23 gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens] 112 4e-23 gi|73535725|pdb|1YVD|A Chain A, Gppnhp-Bound Rab22 Gtpase 112 4e-23 gi|1575675|gb|AAC47440.1| rab6 [Plasmodium falciparum] 112 4e-23 gi|158297778|ref|XP_001238010.2| AGAP011363-PA [Anopheles gambia... 112 4e-23 gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [sy... 112 4e-23 gi|149426497|ref|XP_001518037.1| PREDICTED: similar to rab11, pa... 112 5e-23 gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vini... 112 5e-23 gi|1370180|emb|CAA98167.1| RAB5B [Lotus japonicus] 112 5e-23 gi|81251485|gb|ABB70064.1| WSSV receptor Rab7 [Penaeus monodon] 112 5e-23 gi|145607295|ref|XP_361669.2| RAS small monomeric GTPase Rab6 [M... 112 5e-23 gi|66828353|ref|XP_647531.1| Rab GTPase [Dictyostelium discoideu... 112 5e-23 gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries] 112 5e-23 gi|48766845|gb|AAT46563.1| Rab [Marsupenaeus japonicus] 112 5e-23 gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon n... 111 6e-23 gi|3153154|emb|CAA06922.1| small GTP-binding protein [Mesembryan... 111 6e-23 gi|114675154|ref|XP_001147785.1| PREDICTED: similar to GTP-bindi... 111 6e-23 gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene fami... 111 6e-23 gi|157344707|emb|CAO70462.1| unnamed protein product [Vitis vini... 111 6e-23 gi|50345016|ref|NP_001002178.1| hypothetical protein LOC431725 [... 111 7e-23 gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncog... 111 7e-23 gi|149692307|ref|XP_001496560.1| PREDICTED: similar to rab11 [Eq... 111 7e-23 gi|114672241|ref|XP_001136379.1| PREDICTED: similar to low-Mr GT... 111 7e-23 gi|4758984|ref|NP_004654.1| Ras-related protein Rab-11A [Homo sa... 111 7e-23 gi|57524801|ref|NP_001005827.1| Ras-related protein Rab-11A [Gal... 111 8e-23 gi|41056251|ref|NP_956417.1| hypothetical protein LOC386994 [Dan... 111 8e-23 gi|47220716|emb|CAG11785.1| unnamed protein product [Tetraodon n... 111 8e-23 gi|47229587|emb|CAG06783.1| unnamed protein product [Tetraodon n... 111 8e-23 gi|41055538|ref|NP_957222.1| RAB family member rab-7 [Danio reri... 111 9e-23 gi|158591929|gb|EDP30532.1| Ras-related protein Rab-35, putative... 111 9e-23 gi|84000297|ref|NP_001033251.1| hypothetical protein LOC534708 [... 111 9e-23 gi|157331739|emb|CAO66868.1| unnamed protein product [Vitis vini... 111 9e-23 gi|123976003|ref|XP_001314415.1| small GTP-binding protein, puta... 111 9e-23 gi|66911325|gb|AAH97051.1| Zgc:63637 protein [Danio rerio] 111 9e-23 gi|126321829|ref|XP_001364776.1| PREDICTED: similar to RAB12, me... 111 9e-23 gi|148223285|ref|NP_001087006.1| RAB7, member RAS oncogene famil... 111 1e-22 gi|156396428|ref|XP_001637395.1| predicted protein [Nematostella... 111 1e-22 gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlam... 111 1e-22 gi|18410144|ref|NP_567008.1| ARA6; GTP binding [Arabidopsis thal... 111 1e-22 gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus] 111 1e-22 gi|115768277|ref|XP_782114.2| PREDICTED: hypothetical protein [S... 111 1e-22 gi|146419893|ref|XP_001485906.1| hypothetical protein PGUG_01577... 111 1e-22 gi|57524756|ref|NP_001005591.1| hypothetical protein LOC449549 [... 111 1e-22 gi|4678309|emb|CAB41100.1| small GTP-binding protein-like (fragm... 111 1e-22 gi|91094319|ref|XP_972453.1| PREDICTED: similar to CG6601-PA [Tr... 111 1e-22 gi|73535775|pdb|1Z0J|A Chain A, Structure Of Gtp-Bound Rab22q64l... 111 1e-22 gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos] 111 1e-22 gi|157112176|ref|XP_001657425.1| rab6 [Aedes aegypti] >gnl|BL_OR... 111 1e-22 gi|116781044|gb|ABK21941.1| unknown [Picea sitchensis] 111 1e-22 gi|48096836|ref|XP_392533.1| PREDICTED: similar to Rab-protein 6... 111 1e-22 gi|149728225|ref|XP_001488351.1| PREDICTED: similar to RAB7 prot... 111 1e-22 gi|148227273|ref|NP_001090835.1| RAB6B, member RAS oncogene fami... 111 1e-22 gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histol... 110 1e-22 gi|19114161|ref|NP_593249.1| GTPase Ryh1 [Schizosaccharomyces po... 110 1e-22 gi|157112172|ref|XP_001657423.1| rab6 [Aedes aegypti] >gnl|BL_OR... 110 1e-22 gi|147864853|emb|CAN79376.1| hypothetical protein [Vitis vinifer... 110 1e-22 gi|50540176|ref|NP_001002555.1| hypothetical protein LOC436828 [... 110 1e-22 gi|55925277|ref|NP_001007360.1| RAB11a, member RAS oncogene fami... 110 1e-22 gi|50754381|ref|XP_414359.1| PREDICTED: similar to RAB7 protein ... 110 1e-22 gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] 110 1e-22 gi|91076508|ref|XP_973251.1| PREDICTED: similar to CG5771-PB, is... 110 1e-22 gi|47223044|emb|CAG07131.1| unnamed protein product [Tetraodon n... 110 1e-22 gi|156121229|ref|NP_001095762.1| hypothetical protein LOC615804 ... 110 1e-22 gi|17137220|ref|NP_477172.1| Rab-protein 6 CG6601-PA [Drosophila... 110 1e-22 gi|73987203|ref|XP_854399.1| PREDICTED: similar to RAB11B, membe... 110 2e-22 gi|126321924|ref|XP_001370672.1| PREDICTED: similar to RAB31, me... 110 2e-22 gi|145332843|ref|NP_001078287.1| ARA6 [Arabidopsis thaliana] 110 2e-22 gi|78045539|ref|NP_001030253.1| hypothetical protein LOC509970 [... 110 2e-22 gi|1174149|gb|AAA86640.1| small GTP binding protein Rab7 [Homo s... 110 2e-22 gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Dan... 110 2e-22 gi|50286745|ref|XP_445802.1| unnamed protein product [Candida gl... 110 2e-22 gi|42543204|pdb|1OIW|A Chain A, X-Ray Structure Of The Small G P... 110 2e-22 gi|66359380|ref|XP_626868.1| Rab5 like small GTpase [Cryptospori... 110 2e-22 gi|17865835|ref|NP_524472.1| Rab-protein 7 CG5915-PA [Drosophila... 110 2e-22 gi|1050551|emb|CAA61797.1| rab7 [Mus musculus] 110 2e-22 gi|6323291|ref|NP_013363.1| GTPase, Ras-like GTP binding protein... 110 2e-22 gi|21465930|pdb|1KY2|A Chain A, Gppnhp-Bound Ypt7p At 1.6 A Reso... 110 2e-22 gi|13027392|ref|NP_076440.1| RAB7, member RAS oncogene family [R... 110 2e-22 gi|34147513|ref|NP_004628.4| RAB7, member RAS oncogene family [H... 109 2e-22 gi|51247925|pdb|1VG1|A Chain A, Gdp-Bound Rab7 >gnl|BL_ORD_ID|13... 109 2e-22 gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella... 109 2e-22 gi|158301228|ref|XP_320947.4| AGAP002092-PA [Anopheles gambiae s... 109 2e-22 gi|75070701|sp|Q5R9Y4|RAB7A_PONPY Ras-related protein Rab-7a >gn... 109 2e-22 gi|50979156|ref|NP_001003316.1| RAB7, member RAS oncogene family... 109 2e-22 gi|111061153|gb|EAT82273.1| hypothetical protein SNOG_09938 [Pha... 109 2e-22 gi|1628428|emb|CAA63555.1| GTPase; RAB6 [Plasmodium falciparum 3D7] 109 2e-22 gi|47228262|emb|CAG07657.1| unnamed protein product [Tetraodon n... 109 2e-22 gi|67610128|ref|XP_667084.1| Rab5 [Cryptosporidium hominis TU502... 109 2e-22 gi|123448393|ref|XP_001312927.1| small GTP-binding protein, puta... 109 3e-22 gi|106507164|ref|NP_001020471.2| RAB12, member RAS oncogene fami... 109 3e-22 gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa (jap... 109 3e-22 gi|62857817|ref|NP_001017246.1| RAB19, member RAS oncogene famil... 109 3e-22 gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (jap... 109 3e-22 gi|4105819|gb|AAD02565.1| Rab7 [Homo sapiens] 109 3e-22 gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula] 109 3e-22 gi|125836149|ref|XP_001339908.1| PREDICTED: hypothetical protein... 109 3e-22 gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] 109 3e-22 gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japo... 109 3e-22 gi|50292103|ref|XP_448484.1| unnamed protein product [Candida gl... 109 3e-22 gi|114052691|ref|NP_001040270.1| ras small monomeric GTPase Rab6... 109 3e-22 gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene fami... 109 4e-22 gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideu... 109 4e-22 gi|115450775|ref|NP_001048988.1| Os03g0151900 [Oryza sativa (jap... 109 4e-22 gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cry... 109 4e-22 gi|6679583|ref|NP_033023.1| RAB11B, member RAS oncogene family [... 109 4e-22 gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p... 109 4e-22 gi|148922827|ref|NP_001092211.1| hypothetical protein LOC562596 ... 109 4e-22 gi|60302752|ref|NP_001012569.1| RAB11B, member RAS oncogene fami... 109 4e-22 gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound ... 109 4e-22 gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens] 109 4e-22 gi|57526504|ref|NP_001002750.1| RAB30, member RAS oncogene famil... 109 4e-22 gi|61806504|ref|NP_001013485.1| hypothetical protein LOC541339 [... 109 5e-22 gi|47225306|emb|CAG09806.1| unnamed protein product [Tetraodon n... 108 5e-22 gi|91081339|ref|XP_970787.1| PREDICTED: similar to CG9100-PB, is... 108 5e-22 gi|145529147|ref|XP_001450362.1| hypothetical protein GSPATT0001... 108 5e-22 gi|14249144|ref|NP_116006.1| RAB11B, member RAS oncogene family ... 108 5e-22 gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putativ... 108 5e-22 gi|15222396|ref|NP_172221.1| AtRABA2b (Arabidopsis Rab GTPase ho... 108 5e-22 gi|66472490|ref|NP_001018466.1| hypothetical protein LOC553657 [... 108 5e-22 gi|17570073|ref|NP_510790.1| RAB family member (rab-6.2) [Caenor... 108 5e-22 gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus] 108 5e-22 gi|156717362|ref|NP_001096221.1| hypothetical protein LOC1001247... 108 5e-22 gi|10120632|pdb|1D5C|A Chain A, Crystal Structure Of Plasmodium ... 108 5e-22 gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene fam... 108 5e-22 gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis] >gnl|BL_O... 108 5e-22 gi|85115075|ref|XP_964811.1| hypothetical protein [Neurospora cr... 108 5e-22 gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [H... 108 5e-22 gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus] 108 6e-22 gi|146414423|ref|XP_001483182.1| conserved hypothetical protein ... 108 6e-22 gi|157767730|ref|XP_001667345.1| Hypothetical protein CBG15944 [... 108 6e-22 gi|148233560|ref|NP_001086132.1| MGC83971 protein [Xenopus laevi... 108 6e-22 gi|6984166|gb|AAF34783.1|AF228419_1 RAB6 protein [Toxoplasma gon... 108 6e-22 gi|131849|sp|P22129|RB11B_DISOM Ras-related protein Rab-11B (ORA... 108 6e-22 gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus] 108 7e-22 gi|149239262|ref|XP_001525507.1| GTP-binding protein ryh1 [Lodde... 108 7e-22 gi|66504348|ref|XP_395496.2| PREDICTED: similar to Rab30 CG9100-... 108 8e-22 gi|6682935|dbj|BAA88954.1| Rab7 [Tetrahymena thermophila] 107 8e-22 gi|52345666|ref|NP_001004880.1| MGC88884 protein [Xenopus tropic... 107 8e-22 gi|10880926|gb|AAG24438.1|AF304518_1 small GTP-binding protein R... 107 9e-22 gi|119393797|gb|ABL74414.1| Rab7 [Aedes albopictus] 107 9e-22 gi|4758986|ref|NP_004209.1| RAB11B, member RAS oncogene family [... 107 9e-22 gi|157136642|ref|XP_001663804.1| ras-related protein Rab-7 [Aede... 107 9e-22 gi|94733945|emb|CAK04342.1| novel protein (zgc:55760) [Danio rerio] 107 9e-22 gi|15238317|ref|NP_201304.1| AtRABH1a (Arabidopsis Rab GTPase ho... 107 1e-21 gi|5902803|sp|P28188|ARA5_ARATH Ras-related protein ARA-5 >gnl|B... 107 1e-21 gi|54606871|ref|NP_001006108.1| RAB30, member RAS oncogene famil... 107 1e-21 gi|67464143|pdb|1T91|A Chain A, Crystal Structure Of Human Small... 107 1e-21 gi|56757031|gb|AAW26687.1| SJCHGC02776 protein [Schistosoma japo... 107 1e-21 gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malas... 107 1e-21 gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human R... 107 1e-21 gi|156543352|ref|XP_001607917.1| PREDICTED: similar to putative ... 107 1e-21 gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca coagulata] 107 1e-21 gi|159102818|gb|EDP41716.1| hypothetical protein MGL_3924 [Malas... 107 1e-21 gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab1... 107 1e-21 gi|148224120|ref|NP_001079868.1| hypothetical protein LOC379558 ... 107 1e-21 gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In C... 107 1e-21 gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus] >gnl|BL... 107 1e-21 gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus] 107 1e-21 gi|145549235|ref|XP_001460297.1| hypothetical protein GSPATT0002... 107 1e-21 gi|15230422|ref|NP_187823.1| AtRABA4d (Arabidopsis Rab GTPase ho... 107 1e-21 gi|126139533|ref|XP_001386289.1| Rab5-like GTPase [Pichia stipit... 107 1e-21 gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioid... 107 1e-21 gi|149758270|ref|XP_001489809.1| PREDICTED: similar to RAS and E... 107 2e-21 gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon n... 107 2e-21 gi|147899039|ref|NP_001089868.1| hypothetical protein LOC734934 ... 107 2e-21 gi|148236881|ref|NP_001088852.1| hypothetical protein LOC496163 ... 107 2e-21 gi|17538174|ref|NP_503120.1| 4R79.2 [Caenorhabditis elegans] >gn... 107 2e-21 gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti] >gnl|BL_O... 107 2e-21 gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella] 107 2e-21 gi|156088339|ref|XP_001611576.1| Ras family protein [Babesia bov... 107 2e-21 gi|71013586|ref|XP_758632.1| hypothetical protein UM02485.1 [Ust... 107 2e-21 gi|156035889|ref|XP_001586056.1| hypothetical protein SS1G_13149... 107 2e-21 gi|3024528|sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV >gnl... 106 2e-21 gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon n... 106 2e-21 gi|126327867|ref|XP_001363218.1| PREDICTED: similar to Rab6 prot... 106 2e-21 gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens] 106 2e-21 gi|73946698|ref|XP_541269.2| PREDICTED: similar to RAS and EF ha... 106 2e-21 gi|19918938|dbj|BAB88682.1| small GTPase AvaA [Emericella nidulans] 106 2e-21 gi|121582364|ref|NP_001073492.1| hypothetical protein LOC566010 ... 106 2e-21 gi|13195674|ref|NP_077249.1| RAB6A, member RAS oncogene family [... 106 2e-21 gi|50408755|ref|XP_456809.1| hypothetical protein DEHA0A11451g [... 106 2e-21 gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus... 106 2e-21 gi|119907597|ref|XP_001252030.1| PREDICTED: similar to Rab6 prot... 106 2e-21 gi|146186076|ref|XP_001032971.2| Ras family protein [Tetrahymena... 106 2e-21 gi|125828213|ref|XP_001331974.1| PREDICTED: similar to RAB6, mem... 106 2e-21 gi|118085220|ref|XP_425653.2| PREDICTED: similar to RAB38 [Gallu... 106 2e-21 gi|156349251|ref|XP_001621980.1| hypothetical protein NEMVEDRAFT... 106 2e-21 gi|83751822|gb|ABC42924.1| GTP-binding protein [Anas platyrhynchos] 106 2e-21 gi|149028369|gb|EDL83766.1| rCG40811, isoform CRA_b [Rattus norv... 106 2e-21 gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Pha... 106 2e-21 gi|62898834|dbj|BAD97271.1| RAB6A, member RAS oncogene family is... 106 2e-21 gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces po... 106 2e-21 gi|38679888|ref|NP_942599.1| RAB6A, member RAS oncogene family i... 106 2e-21 gi|50420081|ref|XP_458573.1| hypothetical protein DEHA0D03113g [... 106 2e-21 gi|126135226|ref|XP_001384137.1| predicted protein [Pichia stipi... 106 2e-21 gi|154422404|ref|XP_001584214.1| Ras family protein [Trichomonas... 106 2e-21 gi|126327865|ref|XP_001363135.1| PREDICTED: similar to Rab6 prot... 106 2e-21 gi|147903483|ref|NP_001080506.1| RAB6A, member RAS oncogene fami... 106 3e-21 gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene famil... 106 3e-21 gi|109459131|ref|XP_001062702.1| PREDICTED: similar to RAB6A, me... 106 3e-21 gi|73535740|pdb|1YZQ|A Chain A, Gppnhp-Bound Rab6 Gtpase 106 3e-21 gi|68357838|ref|XP_684705.1| PREDICTED: hypothetical protein [Da... 106 3e-21 gi|114051368|ref|NP_001040368.1| Rab7 [Bombyx mori] >gnl|BL_ORD_... 106 3e-21 gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa (jap... 106 3e-21 gi|116498990|gb|EAU81885.1| hypothetical protein CC1G_06096 [Cop... 106 3e-21 gi|119478910|ref|XP_001259484.1| Rab small monomeric GTPase Rab7... 106 3e-21 gi|60223069|ref|NP_001012486.1| RAB18, member RAS oncogene famil... 106 3e-21 gi|45361477|ref|NP_989315.1| RAB6A, member RAS oncogene family [... 106 3e-21 gi|56753633|gb|AAW25019.1| SJCHGC09359 protein [Schistosoma japo... 106 3e-21 gi|47222578|emb|CAG02943.1| unnamed protein product [Tetraodon n... 106 3e-21 gi|109107885|ref|XP_001115437.1| PREDICTED: similar to RAB6A, me... 106 3e-21 gi|121713784|ref|XP_001274503.1| Rab small monomeric GTPase Rab7... 106 3e-21 gi|6755258|ref|NP_035355.1| RAB18, member RAS oncogene family [M... 106 3e-21 gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana] 106 3e-21 gi|157766202|ref|XP_001675444.1| Hypothetical protein CBG18559 [... 106 3e-21 gi|73987984|ref|XP_850271.1| PREDICTED: similar to RAB6A, member... 106 3e-21 gi|113206062|ref|NP_001038105.1| RAB6A, member RAS oncogene fami... 106 3e-21 gi|19923231|ref|NP_002860.2| RAB6A, member RAS oncogene family i... 106 3e-21 >gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melanogaster] gi|22946025|gb|AAF52775.2| CG3769-PA [Drosophila melanogaster] gi|66770889|gb|AAY54756.1| IP11319p [Drosophila melanogaster] Length = 368 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 368/368 (100%), Positives = 368/368 (100%) Query: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI Sbjct: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 Query: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE Sbjct: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE Sbjct: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 Query: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL Sbjct: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS Sbjct: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 Query: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR Sbjct: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 Query: 361 GKFESVQT 368 GKFESVQT Sbjct: 361 GKFESVQT 368 >gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoobscura] gi|54645577|gb|EAL34315.1| GA17674-PA [Drosophila pseudoobscura] Length = 368 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 295/368 (80%), Positives = 331/368 (89%), Gaps = 1/368 (0%) Query: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 MRLP IF S H+R+ +MF K TEGG++ATPSIQDIAGRLAEEQQRLRQLEAT+ PKERT+ Sbjct: 1 MRLPQIFLSWHKRILRMFEKSTEGGDNATPSIQDIAGRLAEEQQRLRQLEATSMPKERTL 60 Query: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 LVLGSKCVGK+TAINKFFDREEH TRPTLALEYSFGRRIGSG+SPQV+NVWELGSLDNA+ Sbjct: 61 LVLGSKCVGKSTAINKFFDREEHTTRPTLALEYSFGRRIGSGRSPQVINVWELGSLDNAD 120 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 QLLEVPMRTHGLQQLAV +M+DLSQPQRFWTDLECAYKGLR T+Q+++ ++TPELRE LE Sbjct: 121 QLLEVPMRTHGLQQLAVFIMVDLSQPQRFWTDLECAYKGLRVTSQELLARMTPELRETLE 180 Query: 181 QRTVERVGQQNK-DSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGA 239 QRT+ERVG QNK D L+ LPFPV+IVGGKYDVF DP ++K CRCLRSMAH IGGA Sbjct: 181 QRTLERVGHQNKEDLGTLELLPFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGA 240 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 LLFYSQK+PKL+KVLRDTI H+GFGSP+HPFRSHV D NEPL +WFGTDSWS+IGDTGAQ Sbjct: 241 LLFYSQKVPKLSKVLRDTISHMGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDTGAQ 300 Query: 300 SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLL 359 SVERIGATFG+ VPQLQLEKQ + DPAKDPGFKE +IDE+R+QKNEELA +MRDVLL Sbjct: 301 SVERIGATFGVAVPQLQLEKQLQQVPQDPAKDPGFKESLIDEMRAQKNEELATIMRDVLL 360 Query: 360 RGKFESVQ 367 RGKFESVQ Sbjct: 361 RGKFESVQ 368 >gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 light intermediate chain [Gallus gallus] Length = 637 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 116/380 (30%), Positives = 193/380 (50%), Gaps = 24/380 (6%) Query: 2 RLPLIFHSLHQRLQKMFVKRTEGGES------ATPSIQDIAGRLAEEQQRLRQLEATTTP 55 RLP L +RL +R G A ++ DIA E+++ Sbjct: 256 RLPAE-LQLPERLAPFPWRRAAGPGRIAAMPKAGDTLWDIARDEVEKRENNGDDGKRVEV 314 Query: 56 KERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS-PQVMNVWELG 114 E+++L +GSK GKTT I + +REE +PTL LEY+FGRR + + + WE+G Sbjct: 315 CEKSVLFMGSKNGGKTTIILRCLEREEVP-KPTLVLEYTFGRRARRHNAPKDIAHFWEIG 373 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV--- 171 + +L+ +P+ + ++ AV+L+LDLS+P W +E + R+ +++ K+ Sbjct: 374 GGTSLLELIRIPITVNNIRSFAVVLVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKT 433 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 PE+ ++Q+ + + + D + +DP P P++I+G KYD+F FD +RK R LR Sbjct: 434 DPEVAAEIKQKMQNNLQRDHPDYDLVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRF 493 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 ++H G +L+F S+ L K R I HL FG +S VD ++PL I G DS S Sbjct: 494 VSHYYGASLVFTSKSEALLLKA-RALINHLAFGYDRS--KSVSVDHSKPLFIPAGLDSLS 550 Query: 292 KIGDTG--AQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEI 342 +IG ++ ++ A +E+ + EK L+++ DPA+ + E +D + Sbjct: 551 QIGPPPTSDSNIGKMRANTPLELWKKVFEKTFPPRSFSDLQDSKDPAQVSQYAEYEVDVM 610 Query: 343 RSQKNEELAGLMRDVLLRGK 362 R+QKN+E R+ K Sbjct: 611 RAQKNQEFEQYKRNASKSWK 630 >gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light intermediate chain isoform 1 [Pan troglodytes] Length = 351 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 177/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDRDE-PPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK++EL R K Sbjct: 298 PPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain isoform 1 variant [Homo sapiens] Length = 351 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 109/348 (31%), Positives = 175/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDRDE-PPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K LR I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-LRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 298 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 345 >gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain isoform 1 [Homo sapiens] gi|19908231|gb|AAL99216.1| dynein 2 light intermediate chain [Homo sapiens] gi|119620696|gb|EAX00291.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_c [Homo sapiens] Length = 351 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 174/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 298 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 345 >gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] gi|81673547|gb|AAI09911.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] Length = 351 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 176/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKRGSSENEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDRDE-PPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E LDP P P Sbjct: 121 NDLWPTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKDHPDRELLDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS S+IG + ++ A M++ + EK Sbjct: 240 GINKS--KSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDLWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPAKDP + E +DE+R QK++EL R K Sbjct: 298 PPKSINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|20988526|gb|AAH30450.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|24659541|gb|AAH39070.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 351 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 110/348 (31%), Positives = 179/348 (51%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E+++ E+++ +GSK GKTT I + DR+E A +P Sbjct: 2 PSETLWEIAKAEVEKRRSHGSEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDRDESA-KP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W+ +E + + +++ K+ + + + QR V + + D E +DP P P Sbjct: 121 NDLWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS +IG + ++ A ME+ + +K Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 298 PPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWK 345 >gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] Length = 358 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 323/323 (100%), Positives = 323/323 (100%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSP 105 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSP Sbjct: 36 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSP 95 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ Sbjct: 96 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 155 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT Sbjct: 156 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 215 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF Sbjct: 216 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 275 Query: 286 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQ 345 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQ Sbjct: 276 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQ 335 Query: 346 KNEELAGLMRDVLLRGKFESVQT 368 KNEELAGLMRDVLLRGKFESVQT Sbjct: 336 KNEELAGLMRDVLLRGKFESVQT 358 >gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein [Equus caballus] Length = 351 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 176/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR+E +P Sbjct: 2 PSDTLWEIAKAEVEKRGSNGSESDGVEIGEKSVFFIGSKNGGKTTIILRCLDRDE-PPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVNKVIMKLGKKNSKASSEMRQKIWSNMQKDHPDREIIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS S+IG + ++ A ME+ + E+ Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMELWKKVYERLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK++EL R K Sbjct: 298 PPKNTNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 387 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 108/346 (31%), Positives = 179/346 (51%), Gaps = 17/346 (4%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E+++ E+++ +GSK GKTT I + DR+E +PTL Sbjct: 40 DTLWEIAKAEVEKREISENGGDGAEVCEKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTL 98 Query: 90 ALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 99 ALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITNESLRTFSLVLVLDLSKPND 158 Query: 149 FWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFPVI 205 W +E + + +++ K+ + + + Q+ + + + D E +DP P P++ Sbjct: 159 LWPTMESLLQVTKAHVDKLIMKLGKTSTKAASEMRQKMWSNMQKDHPDRELIDPFPIPLV 218 Query: 206 IVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 I+G KYD+F FD RK C+ LR ++H G +L+F S+ L K +R I L FG Sbjct: 219 IIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMFASKSEALLLK-IRGVINQLAFGI 277 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQSVERIGATFGMEVPQLQLEK---- 319 +S VD N+PL I G DS S+IG + ++ A ME+ + EK Sbjct: 278 DKS--KSISVDQNKPLFIPAGLDSLSQIGSPPLSENEIGKLHAQTPMELWKKVYEKVFPP 335 Query: 320 ---QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 KET DPA+DP + E +DE+R+QK++EL ++ K Sbjct: 336 KSANTSKETRDPARDPQYAESEVDEMRAQKDQELEQYKKNTSKSWK 381 >gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] Length = 350 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 173/348 (49%), Gaps = 18/348 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIW-NYAEDHPDHELIDPFPVP 179 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 180 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 238 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 239 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 296 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 297 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 344 >gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|62822153|gb|AAY14702.1| unknown [Homo sapiens] gi|119620694|gb|EAX00289.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 352 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 108/349 (30%), Positives = 174/349 (49%), Gaps = 18/349 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNK-DSEKLDPLPF 202 W +E + + +++ K+ + + Q+ + + + D E +DP P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPQDHELIDPFPV 180 Query: 203 PVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 P++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L Sbjct: 181 PLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLA 239 Query: 263 FGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK- 319 FG +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 FGIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKL 297 Query: 320 ------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 298 FPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 346 >gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 2 [Canis familiaris] Length = 348 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 174/348 (50%), Gaps = 20/348 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKR---GSEGDGLEIGEKSVFFIGSKNGGKTTIILRCLDRDE-PPKP 57 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 58 TLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTFSIVLVLDLSKP 117 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +M+ K+ + + Q+ + + + D E +DP P Sbjct: 118 NDLWPTMENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIP 177 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 178 LVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-VRGVINQLAF 236 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS S+IG + ++ A M++ + E+ Sbjct: 237 GIDKS--KSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVF 294 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 295 PPKSTNTLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWK 342 >gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermediate chain isoform 2 [Pan troglodytes] Length = 334 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 105/336 (31%), Positives = 174/336 (51%), Gaps = 17/336 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDRDE-PPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEEL 350 LK+ DPA+DP + E +DE+R QK++ L Sbjct: 298 PPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQVL 333 >gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 [Macaca mulatta] Length = 365 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 101/350 (28%), Positives = 164/350 (46%), Gaps = 15/350 (4%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + ++ +IA E++ E+++ +GSK GKTT I + DR+ Sbjct: 13 PQKIIETLWEIAKAEVEKRGINGSEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDRDRPP 72 Query: 85 TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 G + + WELG + L+ VP+ + L+ +++L+LDLS Sbjct: 73 KMVLFLFFSFSFCHPGWSTPKDIAHFWELGGGTSLLDLISVPITSDTLRTFSLVLVLDLS 132 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLP 201 +P W +E + + +M+ K+ P+ + Q+ + + + D E +DP P Sbjct: 133 KPNDLWPTMENLLQATKSHVDKMIMKLGKTNPKAASEMRQKIWNNMQKDHPDRELIDPFP 192 Query: 202 FPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHL 261 P++I+G KYD+F F+ RK C+ LR +AH G +L+F S+ L K +R I L Sbjct: 193 VPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQL 251 Query: 262 GFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK 319 FG +S VD N+PL I G DS+S+IG + ++ A ME+ + EK Sbjct: 252 AFGIDKS--KSICVDQNKPLLITAGLDSFSQIGSPPVPENDIGKLHAHSPMELWKKVYEK 309 Query: 320 -------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 310 LFPPKSINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 359 >gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chain isoform 3 [Homo sapiens] Length = 334 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 104/333 (31%), Positives = 170/333 (51%), Gaps = 17/333 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKN 347 LK+ DPA+DP + E +DE+R QK+ Sbjct: 298 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKD 330 >gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115941395|ref|XP_001177851.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 363 Score = 361 bits (928), Expect = 4e-98, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 184/350 (52%), Gaps = 16/350 (4%) Query: 27 SATPSIQDIAGRLAEEQ--QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + SI DIA AE++ ++ E IL +GSK GKT+ I +F ++ E A Sbjct: 4 NKEKSIWDIAILEAEQKHATESKEQGGEAKGSENHILFIGSKNAGKTSIILRFLEK-EEA 62 Query: 85 TRPTLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 +PT+ALEY+FGRR + ++WELG QL E+P+ + ++++++DL Sbjct: 63 PKPTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDL 122 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPL 200 SQP W +E KG D +Q++ K P++++ +++R +R+G + D + LDP Sbjct: 123 SQPYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHPDRDMLDPF 182 Query: 201 PFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICH 260 P P++IVG KYDV+ FDP RK + LR +AH G AL F S K L ++ + H Sbjct: 183 PLPLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTKNLVSH 242 Query: 261 LGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQSVERIGATFGMEVPQ---- 314 L FG+ ++ +D N+P+ + FG DS +IG + R A +++ + Sbjct: 243 LAFGTTL-SLKTISIDPNKPISVPFGLDSLEQIGLPPVADDDLGRSNARTPLDLWKQAFT 301 Query: 315 -LQLEKQKLKET-TDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 +K +K DP+KDP + E +D +R QKN+EL + R K Sbjct: 302 SYFPQKSTIKAIVEDPSKDPQYAEAAVDNMREQKNKELERYRKQAERRAK 351 >gi|157119433|ref|XP_001653379.1| conserved hypothetical protein [Aedes aegypti] gi|108883162|gb|EAT47387.1| conserved hypothetical protein [Aedes aegypti] Length = 347 Score = 360 bits (924), Expect = 1e-97, Method: Composition-based stats. Identities = 174/343 (50%), Positives = 234/343 (68%), Gaps = 10/343 (2%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 T +IQDIA +L E + T P ERTI VLGSK GK+T IN+F DR++ TR Sbjct: 13 DTTETIQDIAMKLVTEHMKQESS-LTGGPTERTIFVLGSKGAGKSTLINRFLDRDDI-TR 70 Query: 87 PTLALEYSFGRRIGSGKS--PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 PTLALEYSFGRR SG+ + NVWELGSL N+ QL+EVP+R+HGL A +++LDLS Sbjct: 71 PTLALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAAFAAVIVLDLS 130 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPV 204 QP R WTDL+C GL+ + +P+ +++R ++VG ++D L+ LPFPV Sbjct: 131 QPDRLWTDLQCILNGLKQAISK---NCSPKEVSEMQERMKQKVGLDHEDLNTLEILPFPV 187 Query: 205 IIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 IIVGGKYD F D I+KH CRCLRS++H IG AL+FY+ K L+K++RD + HLGFG Sbjct: 188 IIVGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRDAMNHLGFG 247 Query: 265 SPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 SP++PF++ +D N P+ + FG DSW KIG T S ERIG ++ ++PQ+ EK + + Sbjct: 248 SPSNPFKATALDHNGPIVVPFGGDSWEKIGVTPTNS-ERIGMSYSAQIPQVGTEKVSIPD 306 Query: 325 TTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQ 367 DPAKD GFKE VIDE+R+QK++EL L++D +R KFE+VQ Sbjct: 307 --DPAKDGGFKERVIDELRAQKDDELMRLLKDTEMRMKFEAVQ 347 >gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] Length = 341 Score = 357 bits (916), Expect = 1e-96, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 171/329 (51%), Gaps = 17/329 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA ++++ E+++ +GSK GKTT I + DR+E A +P Sbjct: 2 PSETLWEIAKAEVQKRRSHGSEGDGAEIGEKSLFFIGSKNGGKTTIILRCLDRDESA-KP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W+ +E + + +++ K+ + + + QR V + + D E +DP P P Sbjct: 121 NDHWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS +IG + ++ A ME+ + +K Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIR 343 LK DPA+DP + E +DE+R Sbjct: 298 PPKSTGTLKAVQDPARDPQYAESEVDEMR 326 >gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] Length = 318 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 102/313 (32%), Positives = 162/313 (51%), Gaps = 17/313 (5%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS-PQ 106 E+++ +GSK GKTT I + DR+E +PTLALEY++GRR + Sbjct: 6 SEGDGAEFAEKSVFFIGSKNGGKTTIILRCLDRDE-PPKPTLALEYTYGRRAKGHNTPKD 64 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 + + WELG + L+ +P+ L+ +++L+LDLS+P W +E + + + Sbjct: 65 IAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDK 124 Query: 167 MMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRK 223 ++ K+ + + Q+ + + + D E +DP P P++I+G KYDVF F+ RK Sbjct: 125 VIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQDFESEKRK 184 Query: 224 HTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCI 283 C+ LR +AH G +L+F S+ L K LR I L FG +S VD N+PL I Sbjct: 185 VICKTLRFVAHYYGASLMFTSKSEALLLK-LRGVINQLAFGIDKS--KSICVDQNKPLFI 241 Query: 284 WFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGF 334 G DS+ +IG + ++ A ME+ + EK LK+ DPA+DP + Sbjct: 242 TAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPARDPQY 301 Query: 335 KELVIDEIRSQKN 347 E +DE+R QK+ Sbjct: 302 AENEVDEMRIQKD 314 >gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae str. PEST] gi|116118470|gb|EAA13896.3| AGAP010165-PA [Anopheles gambiae str. PEST] Length = 339 Score = 349 bits (897), Expect = 2e-94, Method: Composition-based stats. Identities = 176/343 (51%), Positives = 234/343 (68%), Gaps = 9/343 (2%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 T +IQDIA +L EQ R AT TP ERT+ VLGSK VGK+T IN+F DR++ R Sbjct: 4 DTTETIQDIAIKLVTEQLRNESRLAT-TPTERTLFVLGSKGVGKSTLINRFLDRDDVP-R 61 Query: 87 PTLALEYSFGRRIGSGKS--PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 PTLALEYSFGR+ SG+ + NVWELGSL N+ QL+E+P+R+HGLQ + I+MLDLS Sbjct: 62 PTLALEYSFGRKTASGQGAQKNICNVWELGSLANSSQLIEMPIRSHGLQTFSCIVMLDLS 121 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPV 204 QP R WTDLE GL+ + E +++ T +R+G+++ D L+ PFP+ Sbjct: 122 QPDRLWTDLESVLNGLKQATAKH---AVAGQIEEMKELTAQRIGKEHPDLSTLELFPFPI 178 Query: 205 IIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 +IVGGKYD++ D IRKH CRCLRS+AH +G AL++YS K L+K++RDT+ HLGFG Sbjct: 179 VIVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRDTMNHLGFG 238 Query: 265 SPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 SP++PFR+ D + PL I FG DSW++IG T + S ERIG +F ++PQL + + Sbjct: 239 SPSNPFRAASFDHSSPLAIPFGADSWARIGVTPSNS-ERIGLSFSTQIPQLPIGNGGIL- 296 Query: 325 TTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQ 367 DPAKD GFKE IDE+RSQK+EEL +++D +R KFE VQ Sbjct: 297 PDDPAKDAGFKEASIDELRSQKDEELMYVLKDTEIRMKFEVVQ 339 >gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibenclamide-sensitive voltage-gated potassium channel, partial [Ornithorhynchus anatinus] Length = 449 Score = 343 bits (881), Expect = 1e-92, Method: Composition-based stats. Identities = 104/329 (31%), Positives = 161/329 (48%), Gaps = 19/329 (5%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E+++ E+++ +GSK GKTT I + DR+E RPTL Sbjct: 1 ETLWEIARAEVEKKE----KPGGGDEGEKSVFFVGSKNGGKTTIILRCLDRDE-PARPTL 55 Query: 90 ALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY+FGRR + + + WELG + L +P+ L+ A + LDLS+P Sbjct: 56 ALEYTFGRRARGHNTPKDIAHFWELGGGTSLLDLARIPITADSLRTFATDIFLDLSRPSE 115 Query: 149 FWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVG 208 W E + +R + + + P R RT V + + D E +DP P P++I+G Sbjct: 116 LWLTAEHLLRAVRTHVENLGQ---PGTRAAATPRTWSPVPEDHPDREFIDPFPIPLVIIG 172 Query: 209 GKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAH 268 KYDVF D RK CR LR +AH G L+F + L K R I HL FG Sbjct: 173 SKYDVFQNLDSEKRKVICRTLRFLAHHHGATLMFTGKSEALLLK-TRSVISHLAFGVGVD 231 Query: 269 PFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ--SVERIGATFGMEVPQLQLE-------K 319 ++ +D N+PL I G DS+S+IG + + ++ +E+ + K Sbjct: 232 RSKALTLDQNKPLFIPAGLDSFSQIGPPPSAAGDIGKLRVQTPLELWKEVYNKAFPLQTK 291 Query: 320 QKLKETTDPAKDPGFKELVIDEIRSQKNE 348 K+ DP +DP + E +D +R+QK++ Sbjct: 292 SDRKDLKDPGRDPQYAEREVDAMRAQKDQ 320 >gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella vectensis] gi|156226126|gb|EDO46938.1| predicted protein [Nematostella vectensis] Length = 366 Score = 343 bits (880), Expect = 1e-92, Method: Composition-based stats. Identities = 107/356 (30%), Positives = 179/356 (50%), Gaps = 20/356 (5%) Query: 24 GGESATPSIQDIAG----RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD 79 G + + +I D+A L E ++ E++ +E I ++GSK GKT+ + +F D Sbjct: 2 GDKRSDKTIWDLAIEERDYLLNEAKKKGTQESSPHGEEAGIFLIGSKNAGKTSMVLRFLD 61 Query: 80 REEHATRPTLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 R+E +PT AL+Y+FGR+ + V ++WELG +L+++P+ ++ L++I Sbjct: 62 RDEVP-KPTTALDYTFGRKAKGHNIAKDVGHIWELGGGTFLSKLIDIPINVDSVRGLSII 120 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSE 195 + LDLS P W +E ++ ++M+++ P + L E+ G + D Sbjct: 121 IFLDLSLPNELWHTMETLLNQVKKRVHKVMDELAAKNPSAVQKLRNDAWEKFGTDHPDKS 180 Query: 196 KLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLR 255 ++P P P+ IVGGKYD++ FDP RK R LR +AH G L F+S K L R Sbjct: 181 FVEPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGRSR 240 Query: 256 DTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ--SVERIGATFGMEVP 313 I HL F + ++ VD N+P+ + G DS ++IG + R+ + ++ Sbjct: 241 GMIGHLLFHTSLG--KAIGVDHNKPIIVSAGQDSLAQIGAPPVASEDLGRLQSRNPYDLW 298 Query: 314 QL------QLEKQKL-KETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + EK K + DP+KDP + E +D +R QK+EEL R + + Sbjct: 299 KAAYATFFPPEKSKQHSDREDPSKDPQYFEAAVDAMRKQKDEELDRYRRQAERKAR 354 >gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Danio rerio] gi|32766386|gb|AAH55198.1| Zgc:63673 [Danio rerio] Length = 358 Score = 337 bits (864), Expect = 9e-91, Method: Composition-based stats. Identities = 114/354 (32%), Positives = 180/354 (50%), Gaps = 19/354 (5%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTT-----PKERTILVLGSKCVGKTTAINKFFD 79 + ++ ++ DIA ++ E P +RT+ +GSK GKTT + +F + Sbjct: 2 PKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLE 61 Query: 80 REEHATRPTLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 R+E A +PTLALEY+FGRR + + ++WELG + L+++P+ + L+V+ Sbjct: 62 RDETA-KPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVV 120 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERV-GQQNKDSEKL 197 L+LDLS+P W +E R+ +++ + ++ V RV + D E + Sbjct: 121 LVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELI 180 Query: 198 DPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDT 257 P P P++IVG K+D+F FD RK C+ LR +AH G +L+F S K R Sbjct: 181 SPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSF 240 Query: 258 ICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQL 315 I L FG+ +S D ++PL I G+DS S+IG A V+ + A ++ + Sbjct: 241 INQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKK 298 Query: 316 QLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 EK ++ KE DP KDP F E +ID IR+QK++EL R+ K Sbjct: 299 VFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 >gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70877049|gb|EAN90434.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 422 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 83/369 (22%), Positives = 144/369 (39%), Gaps = 38/369 (10%) Query: 22 TEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDRE 81 + +D+ + L E T E +L++G+ GKT+ + + F Sbjct: 48 PGMPQVTVDPTKDLWQNII-----LNTRENQVTQTEVNVLIVGTSGGGKTSLLRRIFSGV 102 Query: 82 EHAT----------RPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHG 131 ++ +PT AL+YSF RR + QV + WEL QL EV + Sbjct: 103 NTSSSSVPKSFLRVKPTTALDYSFVRRNDRHIA-QVAHFWELAQGMELSQLCEVVITPEN 161 Query: 132 LQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE---LREILEQRTVERVG 188 + + + +++D S+P W + K + ++ +K+ + + L R VG Sbjct: 162 VHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVG 221 Query: 189 QQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMP 248 ++ D +L P +I+ K D F+G + + K R +R +AH+ G L+F S Sbjct: 222 MEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAEA 280 Query: 249 KLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG-----------DTG 297 LR + HL F S + + + D+++ IG TG Sbjct: 281 I---KLRAVMNHLVFVSTFDLKHIELDPERGAVLVIPSADTFADIGEPAVSDMGGLQSTG 337 Query: 298 AQSVERIGATFGMEVPQLQLEKQKLKE----TTDPAKDPGFKELVIDEIRSQKNEELAGL 353 ++R A P Q E + + + GF E +D +R QK +EL Sbjct: 338 DAELDRWKAPLDAMFPAKQSEGRMQNDSFLKRLYDTGENGFGEPTVDAVRKQKEDELEQY 397 Query: 354 MRDVLLRGK 362 + R K Sbjct: 398 RKSAFKREK 406 >gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 306 bits (784), Expect = 2e-81, Method: Composition-based stats. Identities = 96/354 (27%), Positives = 165/354 (46%), Gaps = 18/354 (5%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + ++ ++ D+A ++ ERT+ ++GSK GKT+ + K DR+E Sbjct: 2 PKISSDTLWDLAAAEVNSRESEDDYGERNVAVERTVFLMGSKAGGKTSILLKCLDRDE-P 60 Query: 85 TRPTLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 ++PTLALEY+FGRR + + ++WELG L+++P+ + L+ L+VIL++DL Sbjct: 61 SKPTLALEYTFGRRARGHNTPKDIAHIWELGGGTFLSDLVQIPITSADLKFLSVILIVDL 120 Query: 144 SQPQRFWTDLECAYKGLRDTAQQ---MMEKVTPELREILEQRTVER----VGQQNKDSEK 196 S+P W E + + ++ M +K Q + + D E Sbjct: 121 SKPNELWGTTEKLLQVTQAHLEKAFSMAQKAQTAKPAATHQTATQSAARVLPADYPDREL 180 Query: 197 LDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRD 256 + P P++IVG KYD+F FD +K + LR +AH +L+ Q Sbjct: 181 ISAFPVPLLIVGSKYDIFQEFDSDKKKLIAQMLRFVAHSYAASLIVIHQXXXXXXXXXXX 240 Query: 257 TICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQ 314 ++ +D +PL I G+DS+S+IG A V+ + A ++ + Sbjct: 241 XXXXXX-XXXXXXXKTVSMDLTKPLIIPAGSDSFSQIGSPCAADVDIASLHARNPKDLWR 299 Query: 315 L------QLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 EK+ ++ DPAKDP + E ID +R+QK++EL R+ + Sbjct: 300 KVCGCVFPPEKEHQQDLKDPAKDPQYSEPQIDAMRAQKDQELEQYKRNAAKTWQ 353 >gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated family member (xbx-1) [Caenorhabditis elegans] gi|77799271|emb|CAB01645.2| Hypothetical protein F02D8.3 [Caenorhabditis elegans] Length = 370 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 96/355 (27%), Positives = 166/355 (46%), Gaps = 34/355 (9%) Query: 31 SIQDIAG--------RLAEEQQRLRQLEATTTP---------KERTILVLGSKCVGKTTA 73 +I D+A R AE +Q+L T + E I+ G++ GK++ Sbjct: 2 NIWDLAKQKLVENKQRAAELKQKLDDENGTQSDNYLSEVRRRHESHIIFAGNRKSGKSSF 61 Query: 74 INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQ 133 + F +R + + ++ LEY++ RR G + N+WELG +LL VP+ ++ Sbjct: 62 MLNFLER-KEDLKDSVGLEYTYARRT-RGNVKDIANLWELGGGATVTELLSVPITMKNVE 119 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 ++IL+LD++ W +E +R + + E+ L+ L ++ R+ + + Sbjct: 120 ICSLILLLDMTNLDEMWITIEKTVDSVRRLVENL-ERQDINLQTRLAEKMRLRLEKYDDG 178 Query: 194 SEKL-DPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 S K+ +P P PV IV KYD F F+ R+H C+ LR +A+ G L+ +S +M + K Sbjct: 179 SLKMCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPK 238 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV 312 ++++ H FG+ + ++ D N+P+ + G DS IG A +GA+ + Sbjct: 239 LVKNMTSHFAFGTVCP--QGYMTDHNKPMFVKCGFDSLESIGIPPASD-NFMGASSPFNL 295 Query: 313 PQL---QLEKQKL-------KETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDV 357 + L QK + DP DP FKE ID + K +EL +R Sbjct: 296 WRESFISLWPQKTGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKELKNHIRSK 350 >gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_a [Mus musculus] Length = 527 Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats. Identities = 71/354 (20%), Positives = 115/354 (32%), Gaps = 48/354 (13%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 52 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 107 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 108 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 165 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 166 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 223 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 224 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 283 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 284 EHLDFIQAHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 341 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 342 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 395 >gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Trypanosoma brucei TREU927] gi|70835124|gb|EAN80626.1| dynein light intermediate chain, putative [Trypanosoma brucei] Length = 418 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 84/366 (22%), Positives = 138/366 (37%), Gaps = 43/366 (11%) Query: 29 TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD--------- 79 P+ +D+ +A L E E + V+G GKT+ I + Sbjct: 61 DPT-KDLWQNIA-----LNTKENNLPQSEANLFVVGCSGAGKTSVIQRVCSAIGAGGNTS 114 Query: 80 -REEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 + + +PT AL+Y + R Q ++ WEL QL EV + + + + Sbjct: 115 GKGKTKVKPTTALDYQYTTRSDRH-VSQTVHFWELAQGMELSQLCEVVITPENVHLMHIA 173 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSE 195 +++D S P W L K + A ++++K+ + L R +G+ + D + Sbjct: 174 IVVDFSDPSSMWDTLAYWLKRVDRRANEILQKMRAKGSNTPDKLHARAQRALGEGHPDLK 233 Query: 196 KLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLR 255 ++ P +IV K D F G K RCLR +AHL G L+F S LR Sbjct: 234 RVRLSGLPTVIVCNKVDAFPG-PMEQMKTLTRCLRFIAHLYGAYLVFSSDADSA---KLR 289 Query: 256 DTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG---------------AQS 300 + HL F +P + + + I D++ IGD Sbjct: 290 LLLNHLLFLTPFDARQVELDVERGTILIMPENDTFVDIGDPPLCDGPSGGPVTQSTGDSE 349 Query: 301 VERIGATFGMEVPQL----QLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRD 356 ++R P + + + + + GF E ID IR QK+EEL + Sbjct: 350 LDRWKVPLDAMFPPKAGGGRAQSDAMLKRLYDMGEGGFGEPTIDTIRRQKDEELEQYRKS 409 Query: 357 VLLRGK 362 R K Sbjct: 410 AARRDK 415 >gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] gi|73919263|sp|Q6PDL0|DC1L2_MOUSE Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|35193080|gb|AAH58645.1| Dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] Length = 492 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 71/354 (20%), Positives = 115/354 (32%), Gaps = 48/354 (13%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKKLAAEDEQ 360 >gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin light chain A [Monodelphis domestica] Length = 520 Score = 277 bits (709), Expect = 9e-73, Method: Composition-based stats. Identities = 68/346 (19%), Positives = 120/346 (34%), Gaps = 45/346 (13%) Query: 24 GGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 G ++ Q++ L+E R R + P + +L+LG GKT+ I + R E Sbjct: 32 GDKAEEDDGQNLWSCILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGRIQGRPE 87 Query: 83 HATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 + EY + + Q NVW L + LL+ M + L+ VIL++ Sbjct: 88 ECKKGR-GAEYLYLSVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMEANSLRDTLVILVV 146 Query: 142 DLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD-------- 193 D+S+P L+ +R+ ++ K+ PE + +EQ+ + + + Sbjct: 147 DMSKPWTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLIRDFQEYVEPGEDFPASP 204 Query: 194 --------------------SEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCR 227 L PV++V K D S + Sbjct: 205 QRRSTLQEDKDDSVMLPLGADTLTYNLGVPVLVVCTKCDAISVLEKEHDYKDEHFDFIQS 264 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G P VV + + I G Sbjct: 265 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPF--KIPAVVVEKDAVFIPAGW 322 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 D+ KIG ++ ++ + E A+D Sbjct: 323 DNDKKIGILHENFQTLKAEDSFEDIITKPPVRKFVHEKEIVAEDDQ 368 >gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculus] gi|74183685|dbj|BAE24463.1| unnamed protein product [Mus musculus] gi|74190862|dbj|BAE28215.1| unnamed protein product [Mus musculus] gi|74212500|dbj|BAE30992.1| unnamed protein product [Mus musculus] Length = 492 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 71/354 (20%), Positives = 115/354 (32%), Gaps = 48/354 (13%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Rattus norvegicus] gi|2494218|sp|Q62698|DC1L2_RAT Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|619665|gb|AAA80334.1| LIC-2 gi|149032345|gb|EDL87236.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_b [Rattus norvegicus] Length = 497 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 71/354 (20%), Positives = 115/354 (32%), Gaps = 48/354 (13%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKDFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------ 219 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRD 248 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chain [Rattus norvegicus] gi|50927372|gb|AAH79201.1| Dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 311 Score = 276 bits (707), Expect = 2e-72, Method: Composition-based stats. Identities = 75/244 (30%), Positives = 127/244 (52%), Gaps = 6/244 (2%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E+++ E+++ +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKRRCHGSDGDGMEIGEKSVFFIGSKNGGKTTIILRCLDRDE-PAKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + ++ K+ + + QR + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVTMKLGKANSKASSEMRQRMWSVMQKDHPDRELIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-MRGVINQLAF 239 Query: 264 GSPA 267 G Sbjct: 240 GIDK 243 >gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light intermediate chain 2 isoform 3 [Bos taurus] Length = 492 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 73/354 (20%), Positives = 114/354 (32%), Gaps = 48/354 (13%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEEMRELERKFVKDFQDYVEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------ 219 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V E Sbjct: 249 EHFDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKE 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 119/352 (33%), Gaps = 49/352 (13%) Query: 21 RTEGGESA--TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKF 77 GG +A Q++ L+E R R + P + +L+LG GKT+ I + Sbjct: 32 SGSGGPAAGDDEDGQNLWSCILSEVSTRSR----SKLPTGKNVLLLGEDGAGKTSLIRRI 87 Query: 78 FDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLA 136 E + LEY + + Q NVW L + LL+ + L+ Sbjct: 88 -QGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTL 145 Query: 137 VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD--- 193 V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ + + + Sbjct: 146 VMLVVDMSKPWTALDSLQKWASVVREHVDKL--KIPPEEMKEMEQKLIRDFQEYVEPGED 203 Query: 194 --------------------------SEKLDPLPFPVIIVGGKYDVFSGFDP------II 221 L PV++V K D S + Sbjct: 204 FPASPQRRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEH 263 Query: 222 RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPL 281 +R G AL++ S K K ++ I +G VV + + Sbjct: 264 FDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAV 321 Query: 282 CIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 I G D+ KIG ++ ++ + E A+D Sbjct: 322 FIPAGWDNDKKIGILHENFQTLKIEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] Length = 492 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 71/354 (20%), Positives = 115/354 (32%), Gaps = 48/354 (13%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKDFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------ 219 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRD 248 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|73919260|sp|Q8R1Q8|DC1L1_MOUSE Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|19484061|gb|AAH23347.1| Dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|74198263|dbj|BAE35301.1| unnamed protein product [Mus musculus] gi|148677352|gb|EDL09299.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] Length = 523 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 119/352 (33%), Gaps = 49/352 (13%) Query: 21 RTEGGESA--TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKF 77 GG +A Q++ L+E R R + P + +L+LG GKT+ I + Sbjct: 32 SGSGGPAAGDDEDGQNLWSCILSEVSTRSR----SKLPTGKNVLLLGEDGAGKTSLIRRI 87 Query: 78 FDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLA 136 E + LEY + + Q NVW L + LL+ + L+ Sbjct: 88 -QGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTL 145 Query: 137 VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD--- 193 V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ + + + Sbjct: 146 VMLVVDMSKPWTALDSLQKWASVVREHVDKL--KIPPEEMKEMEQKLIRDFQEYVEPGED 203 Query: 194 --------------------------SEKLDPLPFPVIIVGGKYDVFSGFDP------II 221 L PV++V K D S + Sbjct: 204 FPASPQRRTTGAQEDRGDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEH 263 Query: 222 RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPL 281 +R G AL++ S K K ++ I +G VV + + Sbjct: 264 FDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAV 321 Query: 282 CIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 I G D+ KIG ++ ++ + E A+D Sbjct: 322 FIPAGWDNDKKIGILHENFQTLKVEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Homo sapiens] Length = 492 Score = 274 bits (702), Expect = 6e-72, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 114/354 (32%), Gaps = 48/354 (13%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Homo sapiens] gi|3287825|sp|O43237|DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|2665836|gb|AAB88513.1| dynein light intermediate chain 2 [Homo sapiens] gi|119603445|gb|EAW83039.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|119603446|gb|EAW83040.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|158256964|dbj|BAF84455.1| unnamed protein product [Homo sapiens] Length = 492 Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 114/354 (32%), Gaps = 48/354 (13%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|55726458|emb|CAH89998.1| hypothetical protein [Pongo pygmaeus] Length = 492 Score = 274 bits (701), Expect = 8e-72, Method: Composition-based stats. Identities = 71/354 (20%), Positives = 113/354 (31%), Gaps = 48/354 (13%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRA----GSKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] gi|73919261|sp|Q9QXU8|DC1L1_RAT Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|6651427|gb|AAF22294.1|AF181992_1 dynein light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 273 bits (700), Expect = 9e-72, Method: Composition-based stats. Identities = 67/352 (19%), Positives = 119/352 (33%), Gaps = 49/352 (13%) Query: 21 RTEGGESA--TPSIQDIAGRLA-EEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKF 77 GG +A Q++ R+ E R R + P + +L+LG GKT+ I + Sbjct: 32 SGSGGPAAGDDEDGQNLWSRILREVSTRSR----SKLPTGKNVLLLGEDGAGKTSLIRRI 87 Query: 78 FDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLA 136 E + LEY + + Q NVW L + LL+ + L+ Sbjct: 88 -QGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDALSLRDTL 145 Query: 137 VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD--- 193 V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ + + + Sbjct: 146 VMLVVDMSKPWTALDSLQKWASVVREHVDKL--KIPPEEMKEMEQKLIRDFQEYVEPGED 203 Query: 194 --------------------------SEKLDPLPFPVIIVGGKYDVFSGFDP------II 221 L PV++V K D S + Sbjct: 204 FPASPQRRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLEKEHDYRDEH 263 Query: 222 RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPL 281 +R G AL++ S K K ++ I +G VV + + Sbjct: 264 FDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAV 321 Query: 282 CIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 I G D+ KIG ++ ++ + E A+D Sbjct: 322 FIPAGWDNDKKIGILHENFQTLKIEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light intermediate chain 2, cytosolic (LIC53/55) (LIC-2) [Canis familiaris] Length = 481 Score = 273 bits (700), Expect = 1e-71, Method: Composition-based stats. Identities = 74/363 (20%), Positives = 119/363 (32%), Gaps = 52/363 (14%) Query: 7 FHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK 66 F H++ + ++R + T L+E R R + P + ILV G Sbjct: 3 FLQTHEQTRVFCLRR----QGTTLRFWS--SILSEVSTRAR----SKLPSGKNILVFGED 52 Query: 67 CVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEV 125 GKTT + K EH + LEY + + NVW L + LL+ Sbjct: 53 GSGKTTLMTK-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKF 110 Query: 126 PMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVE 185 + L + VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 111 AVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEEMRELERKFVK 168 Query: 186 RVGQQ-----------------------------NKDSEKLDPLPFPVIIVGGKYDVFSG 216 D+ L PV++V K D S Sbjct: 169 DFQDYIEPEEGCQGSPQRRGPLTSGPDEENVALPLGDNMLTHNLGIPVLVVCTKCDAVSV 228 Query: 217 FDP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 + LR G AL++ S K K +L I H +G H Sbjct: 229 LEKEHDYRDEHFDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFV 286 Query: 271 RSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAK 330 +V + + I G D+ KI + ++ + + A+ Sbjct: 287 TPALVVEKDAVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAE 346 Query: 331 DPG 333 D Sbjct: 347 DEQ 349 >gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein light intermediate chain 2 [Monodelphis domestica] Length = 493 Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats. Identities = 71/345 (20%), Positives = 119/345 (34%), Gaps = 49/345 (14%) Query: 27 SATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ L+E R R + P + ILV G GKTT + K EH+ Sbjct: 27 NEEDEGQNLWSSILSEVSTRSR----SKLPSGKNILVFGEDGSGKTTLLAK-LQGAEHSK 81 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + + NVW L + LL+ + LQ+ VI + D+S Sbjct: 82 KGR-GLEYLYLNIHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAETLQETLVIFVADMS 140 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ-------------- 190 +P L+ LR+ +M K+ PE +EQ+ V+ + Sbjct: 141 RPWTVMESLQKWASVLREHIDKM--KIPPEEMRDMEQKFVKDFQEYVEPEEGYQGSPQRR 198 Query: 191 ---------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCL 229 D+ L PV++V K D S + + Sbjct: 199 GPLASAQDGENVILPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHV 258 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R G AL++ S K K +L I H +G H +V + + I G D+ Sbjct: 259 RKFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKDAVFIPAGWDN 316 Query: 290 WSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 KI + + + + ++ + + A+D Sbjct: 317 EKKIAILHENFTTVKPDDPY-EDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 light intermediate chain [Apis mellifera] Length = 345 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 104/344 (30%), Positives = 189/344 (54%), Gaps = 22/344 (6%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEH 83 +++ +++DIA R E+++ R+ T ER+I+++GSK VGKTT +++F +++E Sbjct: 2 ADQNSEENVRDIALRFCLEEEQRRKTNPNET-HERSIIIVGSKRVGKTTIVHRFLEKDE- 59 Query: 84 ATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMR----THGLQQLAVIL 139 A +PT+A++YSFGR+ G +++VWE+G L L+ M TH + +++ Sbjct: 60 APKPTIAMDYSFGRKAGKSLIKNIVHVWEVGHLT--SSLVSAAMTGSSLTHSPHHVTILV 117 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDP 199 +LDLSQP+ WT E A +R+ + + + + + +++ ++ +DP Sbjct: 118 ILDLSQPEILWTTFEEALSVVRNAMKMSYDDKIIQELKKQRIKERKKIVEKE-----IDP 172 Query: 200 LPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIC 259 P + +GGKYD F D ++ + LR++AH++G +L ++S K L + ++D + Sbjct: 173 FPMRLCFIGGKYDQFKDLDLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIKDLLS 232 Query: 260 HLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS-----VERIGATFGMEVPQ 314 + GFG+ + DF +PL I GTDS+S I Q+ ++ I + +PQ Sbjct: 233 YYGFGTQFSDIK--CTDFEKPLAISAGTDSFSSIDLQFPQTRPSAMLDTIKQIYVTHIPQ 290 Query: 315 LQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 + + E DP+ DP F E +ID +R+Q+ EE+ L+ D+L Sbjct: 291 ESRSNEIILE--DPSNDPNFNEPIIDRLRTQREEEINILLHDML 332 >gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|67970473|dbj|BAE01579.1| unnamed protein product [Macaca fascicularis] Length = 492 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 115/354 (32%), Gaps = 48/354 (13%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P ++ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKSILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 360 >gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light chain-A [Canis familiaris] Length = 524 Score = 272 bits (697), Expect = 2e-71, Method: Composition-based stats. Identities = 65/342 (19%), Positives = 115/342 (33%), Gaps = 47/342 (13%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAISLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD------------- 193 L+ +R+ ++ K+ PE + +EQ+ + + + Sbjct: 156 WTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRRNT 213 Query: 194 ----------------SEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRS 231 L PV++V K D S + +R Sbjct: 214 GSQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRK 273 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 274 FCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDNDK 331 Query: 292 KIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 KIG ++ ++ + E A+D Sbjct: 332 KIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIVAEDDQ 373 >gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A isoform 2 [Pan troglodytes] gi|134047749|sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|119584837|gb|EAW64433.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_c [Homo sapiens] gi|124297735|gb|AAI31621.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] Length = 523 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 116/340 (34%), Gaps = 43/340 (12%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVERV 187 L+ +R+ ++ +K+ + +E +E QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 215 Query: 188 GQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMA 233 + DS L PV++V K D S + +R Sbjct: 216 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 G AL++ S K K ++ I +G VV + + I G D+ KI Sbjct: 276 LQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDNDKKI 333 Query: 294 GDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 G ++ ++ + E A+D Sbjct: 334 GILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 116/340 (34%), Gaps = 43/340 (12%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVERV 187 L+ +R+ ++ +K+ + +E +E QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 215 Query: 188 GQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMA 233 + DS L PV++V K D S + +R Sbjct: 216 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 G AL++ S K K ++ I +G VV + + I G D+ KI Sbjct: 276 LRYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDNDKKI 333 Query: 294 GDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 G ++ ++ + E A+D Sbjct: 334 GILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] gi|39583371|emb|CAE66345.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] Length = 366 Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats. Identities = 92/355 (25%), Positives = 159/355 (44%), Gaps = 38/355 (10%) Query: 31 SIQDIAG--------RLAEEQQRLRQLEATTTP---------KERTILVLGSKCVGKTTA 73 +I D+A R AE +Q+L E I++ G++ + Sbjct: 2 NIWDLAKQKLVENKQRAAELEQKLDDENGAVNDNYLAEVRRRHESHIIIAGNRQI----I 57 Query: 74 INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQ 133 I+ F E + LE+++ RR G V N+WELG + +LL VP+ ++ Sbjct: 58 IHVEFSGAERRFE-RIGLEFTYARRT-RGNVKDVANLWELGGGSSVTELLSVPITAKNVE 115 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 ++I++LD++ W +E +R + + E+ L+ + +++ R+ + Sbjct: 116 TCSLIVLLDMTNLSEMWITIEKTVDTVRRLVENL-ERQDANLQTRMAEKSRLRLEKYESS 174 Query: 194 SEKLD-PLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 S K+ P P P+ IV KYD F F+ R+H C+ LR +A+ G L+ YS +M + K Sbjct: 175 SLKMCAPCPLPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPK 234 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV 312 ++++ I H FG+ + ++ D N+P+ I G D+ IG +GA+ + Sbjct: 235 LVKNMISHFAFGTVCP--QGYITDHNKPMFIKCGFDNLEAIGIPPGSD-NFMGASSPFNL 291 Query: 313 PQL---QLEKQKL-------KETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDV 357 + L QK + DP DP FKE ID + K +EL +R Sbjct: 292 WRESFISLWPQKTGNVDVEDTKKQDPMIDPVFKEPSIDNLVEIKRKELENHIRSK 346 >gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 374 Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats. Identities = 76/324 (23%), Positives = 116/324 (35%), Gaps = 48/324 (14%) Query: 16 KMFVKRTEG-------GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 + R EG + PS + L+E R R + P +TILVLG Sbjct: 37 PVPQARNEGWGCGLLRYGAVRPSGPSTSSILSEVSTRSR----SKLPSGKTILVLGDNGS 92 Query: 69 GKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPM 127 GKTT + K EH + LEY + + NVW L ++ LL+ + Sbjct: 93 GKTTLMAK-LQGAEHGQKGR-GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAV 150 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ----------MMEKVTPELRE 177 LQ VI ++D+S+P LE LR+ + M +K+ E +E Sbjct: 151 SAESLQHTIVIFVVDMSRPWTAMESLEKWAGVLREHIDKLKIPPEETRGMQQKIIKEFQE 210 Query: 178 ILE---------QRTVERVGQQN-------KDSEKLDPLPFPVIIVGGKYDVFSGFDP-- 219 +E QR GQ+N ++ L PV++V K D S + Sbjct: 211 YVEPEEAYQGSSQRRGPSSGQENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKR 270 Query: 220 ----IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVV 275 +R G AL++ S K K +L + H +G +V Sbjct: 271 GYREEHFDFIQSHIRRFCLQYGAALIYTSVKGEKNLDLLYKYLVHKMYG--FQLTTPALV 328 Query: 276 DFNEPLCIWFGTDSWSKIGDTGAQ 299 + + I G D+ KI Sbjct: 329 VEKDAVFIPAGWDNEKKIAILHEN 352 >gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] gi|5531813|gb|AAD44481.1| dynein light chain-A [Homo sapiens] Length = 523 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 67/340 (19%), Positives = 116/340 (34%), Gaps = 43/340 (12%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVERV 187 L+ +R+ ++ +K+ + +E +E QR Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 215 Query: 188 GQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMA 233 + DS L PV++V K D S + +R Sbjct: 216 QEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIRKFC 275 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 G AL++ S K K ++ I +G VV + + I G D+ KI Sbjct: 276 LRYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDNDKKI 333 Query: 294 GDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 G ++ ++ + E A+D Sbjct: 334 GILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00000012631 [Nasonia vitripennis] Length = 357 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 104/347 (29%), Positives = 177/347 (51%), Gaps = 27/347 (7%) Query: 31 SIQDIAGRLAEEQQRLRQLEATTTP---KERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + QD A LA + + T P E+++++LGS+ VGKTT I +F ++E+ +P Sbjct: 6 TNQDNARELALQASIQEDTQRKTDPEESHEKSLIILGSREVGKTTMIYRFLEKEDTP-KP 64 Query: 88 TLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMR----THGLQQLAVILMLDL 143 TLA++YS+GR+ G V++VWE+G L L+ MR +H V++MLDL Sbjct: 65 TLAMDYSYGRKAGKSLVKDVVHVWEVGHLA--PSLISGSMRGCTLSHSAHHTTVLIMLDL 122 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQ----QNKDSEKLD- 198 +P W LE +R MM EL L +R + + + +D +D Sbjct: 123 GKPDVLWNSLEECLVAVR---AAMMMSYQQELVHDLRERKIRYLRERAKPGTEDEPPVDD 179 Query: 199 PLPFPVIIVGGKYDVFSGFDP-IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDT 257 P P + ++GGKYD F ++ + LR+ AH++G L ++S K L + ++ Sbjct: 180 PFPMRLCLIGGKYDEFRELHSGDDKESIGQALRAAAHVLGAGLHYHSAKDSHLLRRTKEL 239 Query: 258 ICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGD-----TGAQSVERIGATFGMEV 312 + H +G ++ V D+++PL + G+DS+S I A +++ I + Sbjct: 240 LSH--YGFKGQSTKASVTDYDKPLSVAAGSDSFSAIDLKISRNDYAVTLDEIKQIYVRRF 297 Query: 313 PQLQLEKQKLK-ETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 PQ+ + L + DPA DP F E ++D +R Q+ +E++ L+RD+L Sbjct: 298 PQVPKNQDVLPGDMDDPANDPNFNEPIVDRLRLQREQEISVLLRDML 344 >gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 66/340 (19%), Positives = 114/340 (33%), Gaps = 43/340 (12%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVERV 187 L+ +R+ ++ +K+ + +E +E Q Sbjct: 156 WTALDSLQKWASVVREHVDKLKIPPEEMKQIEQKLIRDFQEYVEPGEDFPASPQGRNTAS 215 Query: 188 GQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMA 233 + DS L PV++V K D S + +R Sbjct: 216 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 275 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 G AL++ S K K ++ I +G VV + + I G D+ KI Sbjct: 276 LQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDNDKKI 333 Query: 294 GDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 G + ++ + E A+D Sbjct: 334 GILHENFQTLKAEDNFEGIITKPPVRKFVHEKEIMAEDDQ 373 >gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 115/345 (33%), Gaps = 48/345 (13%) Query: 26 ESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + Q++ L+E R ++ P + +L+ G GKTT ++K EH Sbjct: 22 SNEDDEGQNLWSSILSEVSTRS----SSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHN 76 Query: 85 TRPTLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 + LEY + +VW L + LL+ + L+ + ++D+ Sbjct: 77 KKGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDM 135 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------- 190 S+P L+ LR+ ++ ++ PE +EQR V+ + Sbjct: 136 SRPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQR 193 Query: 191 ---------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCL 229 D+ L P++IV K D + + + Sbjct: 194 RAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHI 253 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R G L++ S K K +L + H + +V + + I G D+ Sbjct: 254 RRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIY--DFQFSSPALVVEKDAVFIPSGWDN 311 Query: 290 WSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 KIG + R F + ++ + + A+D Sbjct: 312 DKKIGILHENFTTVRPEDPF-EDFITKPPVRKLVHDKEISAEDEQ 355 >gi|146097038|ref|XP_001468017.1| dynein light intermediate chain [Leishmania infantum JPCM5] gi|134072383|emb|CAM71091.1| dynein light intermediate chain, putative [Leishmania infantum] Length = 424 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 87/381 (22%), Positives = 157/381 (41%), Gaps = 47/381 (12%) Query: 12 QRLQKMFVKRTEGGESA---TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 Q L + G ++ P+ +D+ + +A E +++++G+ Sbjct: 48 QELSETPTTAATGTSASIVIDPT-KDLW-----QNITRNIKDANVEQTETSLVMVGASGS 101 Query: 69 GKTTAINKFFDREEHA--------TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 GKTT +++ + + + + T AL+YSF RR +P V + WE+ Sbjct: 102 GKTTLLHRIYTSFQSSSSGSGPKRVKATTALDYSFARRSERNVAP-VAHFWEIAQGTQFS 160 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTP 173 QLL++ + + +A +++D S+ + E A LR D +Q+M K + Sbjct: 161 QLLDIVLTPENVHAVAAAVVVDASE-EGLPVSWETATYWLRRLDQRVSDISQRMKAKGST 219 Query: 174 ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA 233 +IL R + +G + D +++ P ++V K D F G D K CR +R +A Sbjct: 220 TPAKIL-TRAQKAIGLDHPDLKRMRLSGIPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLA 277 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 HL G ++F S++ + L + F +P P + + DS+ I Sbjct: 278 HLYGAHVVFTSEQESVRWRALMNFT---LFQAPFDPKYLQTDPERSAVLLTVDRDSFLDI 334 Query: 294 GDT-----------GAQSVERIGATFGMEVPQLQLEKQKLKE-----TTDPAKDPGFKEL 337 GD G ++R A F P +L + K+ + + GF + Sbjct: 335 GDPDVSRLGGSVSTGDAELDRWKAPFDEAFPPKKLNEDKVMDDPFIRRLYDTAEGGFGDP 394 Query: 338 VIDEIRSQKNEELAGLMRDVL 358 VID +R QK+EEL + Sbjct: 395 VIDALRKQKDEELEQYRKKSS 415 >gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] gi|62531080|gb|AAH93336.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 61/345 (17%), Positives = 115/345 (33%), Gaps = 48/345 (13%) Query: 26 ESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + Q++ L+E R ++ P + +L+ G GKTT ++K EH Sbjct: 22 SNEDDEGQNLWSSILSEVSTRS----SSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHN 76 Query: 85 TRPTLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 + LEY + +VW L + LL+ + L+ + ++D+ Sbjct: 77 KKGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDM 135 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------- 190 S+P L+ LR+ ++ ++ PE +EQR V+ + Sbjct: 136 SRPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQR 193 Query: 191 ---------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCL 229 D+ L P++IV K D + + + Sbjct: 194 RAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHI 253 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R G L++ S K K +L + H + +V + + I G D+ Sbjct: 254 RRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIY--DFQFSSPALVVEKDAVLIPSGWDN 311 Query: 290 WSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 KIG + R F + ++ + + A+D Sbjct: 312 DKKIGILHENFTTVRPEDPF-EDFITKPPVRKLVHDKEISAEDEQ 355 >gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 [Bos taurus] gi|86438315|gb|AAI12622.1| Similar to Dynein light intermediate chain 1, cytosolic (Dynein light chain A) (DLC-A) [Bos taurus] Length = 524 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 115/342 (33%), Gaps = 47/342 (13%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 97 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDPYHKGLLKFSLDAISLKDTLVMLVVDMSKP 155 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD------------- 193 L+ +R+ ++ K+ PE + +EQ+ V + + Sbjct: 156 WTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQRRST 213 Query: 194 ----------------SEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRS 231 L PV++V K D S + +R Sbjct: 214 ASQEDRDDSVLLPLGADTLTQNLGVPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRK 273 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 274 FCLQYGAALIYASVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDNDK 331 Query: 292 KIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 KIG ++ ++ + E A+D Sbjct: 332 KIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 373 >gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [Danio rerio] Length = 500 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 60/345 (17%), Positives = 114/345 (33%), Gaps = 48/345 (13%) Query: 26 ESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + Q++ L+E R ++ P + +L+ G GKTT ++K EH Sbjct: 22 SNEDDEGQNLWSSILSEVSTRS----SSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHN 76 Query: 85 TRPTLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 + LEY + +VW L + LL+ + L+ + ++D+ Sbjct: 77 KKGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDM 135 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------- 190 S+P L+ LR+ ++ ++ PE +EQR V+ + Sbjct: 136 SRPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQR 193 Query: 191 ---------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCL 229 D+ L P++IV K D + + + Sbjct: 194 RAPAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHI 253 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R G L++ S K K +L + H + +V + + I G D+ Sbjct: 254 RRFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIY--DFQFSSPALVVEKDAVFIPSGWDN 311 Query: 290 WSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 KI + R F + ++ + + A+D Sbjct: 312 DKKICILHENFTTVRPEDPF-EDFITKPPVRKLVHDKEISAEDEQ 355 >gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] Length = 335 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 64/306 (20%), Positives = 107/306 (34%), Gaps = 43/306 (14%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 16 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 70 Query: 88 TLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + Q NVW L + LL+ + L+ V+L++D+S+P Sbjct: 71 R-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKP 129 Query: 147 QRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVERV 187 L+ +R+ ++ +K+ + +E +E QR Sbjct: 130 WTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTAS 189 Query: 188 GQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMA 233 + DS L PV++V K D S + +R Sbjct: 190 QEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFC 249 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 G AL++ S K K ++ I +G VV + + I G D+ KI Sbjct: 250 LQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDNDKKI 307 Query: 294 GDTGAQ 299 G Sbjct: 308 GILHEN 313 >gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light chain A [Gallus gallus] gi|2494217|sp|Q90828|DC1L1_CHICK Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) (LIC57/59) gi|510249|emb|CAA55698.1| dyenin light chain A [Gallus sp.] Length = 515 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 127/350 (36%), Gaps = 50/350 (14%) Query: 21 RTEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD 79 R G Q++ L+E R R + P +++L+LG GKT+ I K Sbjct: 27 RAGG---EEDDGQNLWSCILSEVSTRSR----SKLPSGKSVLLLGEDGAGKTSLIGKI-Q 78 Query: 80 REEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 E + +EY + + Q NV L + LL+ M + L+ ++ Sbjct: 79 GIEEYKKGR-GMEYLYLNVHDEDRDDQTRCNVRILDGDLYHKGLLKFAMEANSLKDTLIM 137 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE-------- 180 L++D+S+P L+ +R+ ++ +K+ + +E +E Sbjct: 138 LVVDMSRPWTAMDSLQKWASVVREHIDKLKIPPEEMKEMEQKLVRDFQEYVEPGEDFPAS 197 Query: 181 -QRTVERVGQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDP------IIRKHT 225 QR + + DS L PV++V K D S + Sbjct: 198 PQRRNTSLQEDKDDSVILPLGADTLTCNLGIPVVVVCTKCDAISVLEKEHDYRDEHFDFI 257 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 +R G AL++ S K K ++ I +G P + VV + + I Sbjct: 258 QSHIRRFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFNV--PAVVVEKDAVFIPA 315 Query: 286 GTDSWSKIGDTGAQSVERIGA--TFGMEVPQLQLEKQKLKETTDPAKDPG 333 G D+ KIG + + A +F + + ++ + E A+D Sbjct: 316 GWDNDKKIGILHEN-FQTLKAEDSFEDSI-RKPPVRKFVHEKEIVAEDDQ 363 >gi|157874331|ref|XP_001685649.1| dynein light intermediate chain, putative [Leishmania major] gi|68128721|emb|CAJ08854.1| dynein light intermediate chain, putative [Leishmania major] Length = 425 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 88/379 (23%), Positives = 155/379 (40%), Gaps = 50/379 (13%) Query: 12 QRLQKMFVKRTEGGESA---TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 Q L + G ++ P+ +D+ + +A E +++V+G+ Sbjct: 48 QELSEAPTTAATGTSASIVIDPT-KDLW-----QNITRNVKDANVEQTETSLVVVGASGS 101 Query: 69 GKTTAINKFFDREEHAT--------RPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 GKTT +++ + + + + T AL+YSF RR +P V + WE+ Sbjct: 102 GKTTLLHRIYTSFQSNSSGSGPKRVKATTALDYSFARRSERNVAP-VAHFWEIAQGTQFS 160 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTP 173 QLL++ + + + +++D S+ + E A LR D +Q+M K + Sbjct: 161 QLLDIVVTPENVHAVVAAVVVDASE-EGLPVAWETATYWLRRLDQRVSDISQRMKAKGST 219 Query: 174 ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA 233 +IL R + +G + D +++ P ++V K D F D K CR +R +A Sbjct: 220 TPAKIL-TRAQKAIGLDHPDLKRMRLSGVPTVLVINKIDAFRR-DMQQLKFLCRSMRYLA 277 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 HL G ++F S++ + L + F +P P + + DS+ I Sbjct: 278 HLYGAHVVFTSEQESVRWRALMNFT---LFQAPFDPKYLQTDPERSAVLLTVDRDSFLDI 334 Query: 294 GDT-----------GAQSVERIGATFGMEVPQLQLEKQKLKETTDP-------AKDPGFK 335 GD G ++R A F P +L ++ K DP + GF Sbjct: 335 GDPDVSRLGGSASTGDAELDRWKAPFDEAFPPKKLNEEG-KVVDDPFIRRLYDTSEGGFG 393 Query: 336 ELVIDEIRSQKNEELAGLM 354 + VID +R QK+EEL Sbjct: 394 DPVIDALRKQKDEELEQYR 412 >gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] gi|11992258|gb|AAG42486.1|AF317841_1 cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] Length = 508 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 64/346 (18%), Positives = 118/346 (34%), Gaps = 43/346 (12%) Query: 23 EGGESA-TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 G ++ Q++ L+E R R + P + +L+LG GKT+ I K Sbjct: 25 SGDTASEDEDGQNLWSSILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE--------- 180 ++D+S+P L+ +R+ ++ EK+ +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 181 QRTVERVGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCR 227 QR +++ + L PV++V K D S + Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G VV + + I G Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYG--FQFNMPAVVVEKDAVFIPAGW 316 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 D+ KIG ++ ++ + E A+D Sbjct: 317 DNDKKIGILHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQ 362 >gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Gallus gallus] gi|53126839|emb|CAG30989.1| hypothetical protein [Gallus gallus] Length = 488 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 68/353 (19%), Positives = 116/353 (32%), Gaps = 51/353 (14%) Query: 22 TEGGE-----SATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 +G S Q++ L+E R R + P + ILV G GKTT + Sbjct: 13 PDGPGGADLPSEEEEGQNLWSSILSEVSTRSR----SKLPSGKNILVFGDDGSGKTTLMA 68 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + Q NVW L + LL+ + LQ Sbjct: 69 KI-QGAEHGKKGR-GLEYLYLNIHDEDRDDQTRCNVWILDGDLYNKGLLKFAVSAESLQD 126 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 V+ + D+S+P L+ L++ ++ K+ PE +EQ+ ++ + Sbjct: 127 TIVVFVADMSRPWTVMESLQKWASVLQEHIDKL--KIPPEEMRDMEQKFIKEFQEYVEPE 184 Query: 191 ------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------I 220 ++ L PV++V K D S + Sbjct: 185 EGYQGSPQRRGPSSGQEDESVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREE 244 Query: 221 IRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP 280 +R G AL++ S K K +L I H +G +V + Sbjct: 245 HFDFIQSHIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FQFTTPALVVEKDA 302 Query: 281 LCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 303 VFIPAGWDNEKKIAILHENFTTVKPDDAYEDFIAKPPVRKLVHDKELAAEDEQ 355 >gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Xenopus laevis] gi|112419317|gb|AAI22489.1| MGC154222 protein [Xenopus laevis] Length = 487 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 67/349 (19%), Positives = 113/349 (32%), Gaps = 47/349 (13%) Query: 22 TEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 T G Q + L++ R + P + ILV G GKTT + K Sbjct: 15 TPGAGDEEDEGQSLWSSILSDVSTSAR----SKLPSGKNILVFGEDGSGKTTLMAK-LQG 69 Query: 81 EEHATRPTLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 EH + LEY + + NVW L + LL+ + + + + Sbjct: 70 AEHNKKGR-GLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESISETVAVF 128 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------- 190 + D+S+P L LR+ ++ K+ PE LEQ+ ++ + Sbjct: 129 VGDMSRPWTIMESLLKWASVLREHIDKL--KIPPEEMRELEQKIIKDFQEYVEPEEALSG 186 Query: 191 --------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKH 224 D+ L PV++V K D S + Sbjct: 187 SPQRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDF 246 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 +R G AL++ S K K +L I H + H R+ +V + + I Sbjct: 247 IQSHIRKFCLQYGSALIYTSVKEEKNLDLLYKYIVHKTYN--FHFNRAAMVVEKDSVFIP 304 Query: 285 FGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 G D+ KIG + ++ + + A+D Sbjct: 305 AGWDNEKKIGILHENFSTVKPEDAYEDFIVKPPVRKLVHDKEVAAEDEQ 353 >gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-intermediate chain [Xenopus laevis] gi|28280005|gb|AAH45030.1| Dnclic1-prov protein [Xenopus laevis] Length = 508 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 66/346 (19%), Positives = 116/346 (33%), Gaps = 42/346 (12%) Query: 22 TEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + S Q++ L+E R R + P + +L+LG GKT+ I K Sbjct: 25 SGATASEDEDGQNLWSSILSEVSTRSR----SKLPFGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ M ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDDDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE--------- 180 ++D+S+P L+ +R+ ++ E++ +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKLKIPPEEMREMEERIVRHFQEYVEPGDELPTSP 198 Query: 181 QRTVERVGQ-------QNKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCR 227 QR + D L PV++V K D S + Sbjct: 199 QRRNTSSDECDDSVILPLADDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G VV + + I G Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYG--FQFKMPAVVVEKDAVFIPAGW 316 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 D+ KIG +V ++ + E A+D Sbjct: 317 DNDKKIGILHENFQTLKPEDTFEDVITKPPVRKFVHEKEIVAEDDQ 362 >gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] Length = 480 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 65/351 (18%), Positives = 111/351 (31%), Gaps = 53/351 (15%) Query: 22 TEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 G Q + L++ R + P + ILV G GKTT + K Sbjct: 10 ALGAGGEEDEGQSLWSSILSDVSTSAR----SKLPSGKNILVFGEDGSGKTTLVAK-LQG 64 Query: 81 EEHATRPTLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 EH + LEY + + NVW L + LL+ + + + + Sbjct: 65 AEHNKKGR-GLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESIGETVAVF 123 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------- 190 + D+S+P L LR+ ++ K+ PE LEQ+ ++ + Sbjct: 124 VGDMSRPWTIMESLLKWASVLREHIDKL--KIPPEEIRELEQKIIKDFQEYVEPEDALSG 181 Query: 191 --------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKH 224 D+ L PV++V K D S + Sbjct: 182 SPQRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDF 241 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 +R G AL++ S K K +L I H + H + +V + + I Sbjct: 242 IQSHIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYN--FHFNCAAMVVEKDSVFIP 299 Query: 285 FGTDSWSKIGDTGAQSVERIGATFG--MEVPQLQLEKQKLKETTDPAKDPG 333 G D+ KIG + ++ + + A+D Sbjct: 300 AGWDNEKKIGILHEN----FSKPEDAYEDFIVKPPVRKLVHDKEVAAEDEQ 346 >gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] Length = 508 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 64/346 (18%), Positives = 118/346 (34%), Gaps = 43/346 (12%) Query: 23 EGGESA-TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 G ++ Q++ L+E R R + P + +L+LG GKT+ I K Sbjct: 25 SGDTASEDEDGQNLWSSILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE--------- 180 ++D+S+P L+ +R+ ++ EK+ +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 181 QRTVERVGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCR 227 QR +++ + L PV++V K D S + Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G VV + + I G Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYG--FQFNMPAVVVEKDAVFIPAGW 316 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 D+ KIG ++ ++ + E A+D Sbjct: 317 DNDRKIGILHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQ 362 >gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic, light intermediate polypeptide 2 [Macaca mulatta] Length = 497 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 74/359 (20%), Positives = 118/359 (32%), Gaps = 53/359 (14%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGK-------YDVFSGFD 218 D+ L PV++V K + SG + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKVRARGLLAWLGSGSE 248 Query: 219 PIIRKHTCRC----LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 R+ R LR G AL++ S K K +L I H +G H + Sbjct: 249 HAFREKNVRIFDSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPAL 306 Query: 275 VDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 V + + I G D+ KI + ++ + + A+D Sbjct: 307 VVEKDAVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 365 >gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 [Xenopus tropicalis] gi|111305599|gb|AAI21354.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Xenopus tropicalis] Length = 508 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 65/346 (18%), Positives = 118/346 (34%), Gaps = 42/346 (12%) Query: 22 TEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + S Q++ L+E R R + P + +L+LG GKT+ I K Sbjct: 25 SGATASEDEDGQNLWSSILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ M ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE--------- 180 ++D+S+P L+ +R+ ++ EK+ +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKLKIPPEEMKEMEEKIVRNFQEYVEPGEEFPASP 198 Query: 181 -QRTVERVGQQNK------DSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCR 227 +R Q + + L PV++V K D S + Sbjct: 199 QKRNTSSDEQDDSVILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G + VV + + I G Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFLFNM--PAVVVEKDAVFIPAGW 316 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 D+ KIG ++ ++ + E A+D Sbjct: 317 DNDKKIGILHENFQTLKPEDTFEDIITKPPVRKFVHEKEIVAEDDQ 362 >gi|154343515|ref|XP_001567703.1| dynein light intermediate chain, putative [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065035|emb|CAM43147.1| dynein light intermediate chain, putative [Leishmania braziliensis] Length = 428 Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats. Identities = 87/388 (22%), Positives = 154/388 (39%), Gaps = 55/388 (14%) Query: 11 HQRLQKMFVKRTEGGESA----TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK 66 L + V ++ P+ +D+ + +A E ++V+G+ Sbjct: 47 PPELSEAPVTAAA-DNNSQIVIDPT-KDLW-----QNITRNVKDAAVEQTEINLVVVGAP 99 Query: 67 CVGKTTAINKFFDREEHA--------TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 GKTT +++ + + + + T AL+YSF RR +P V + WE+ Sbjct: 100 GSGKTTLLHRIYTSFQSSASGSCSKRVKATTALDYSFARRSERNVAP-VAHFWEIAQGMQ 158 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKV 171 QLL+V + + + +++D S+ + E A +R D +Q+M K Sbjct: 159 FSQLLDVVVTPENVHAIVAAVVVDASE-EGLPVAWEAATYWMRRIDQRVSDISQRMKAKG 217 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 + E L R + VG ++ D +++ P ++V K D F G D K CR +R Sbjct: 218 ST-TPEKLLTRAQKAVGLEHPDLKRMRLSGVPTVLVVNKIDAFRG-DMQQLKLLCRSMRY 275 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 +AHL G ++F S++ + L + F +P P + + DS+ Sbjct: 276 LAHLYGAHVVFTSEQESVRWRALMNFT---LFQAPFDPKHLQTDPERGAVLLTADRDSFL 332 Query: 292 KIGDTG--------------AQSVERIGATFGMEVPQLQLEKQKLKETTDP-------AK 330 IGD ++R F P +L ++ K DP Sbjct: 333 DIGDPNMSRLGGGGSSASTGDAELDRWKVPFDDAFPPKKLNEED-KVMDDPFIRRLYDTS 391 Query: 331 DPGFKELVIDEIRSQKNEELAGLMRDVL 358 + GF E +ID +R QK+EEL ++ Sbjct: 392 EGGFGEPMIDTLRKQKDEELEQYRKNSS 419 >gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon nigroviridis] Length = 463 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 61/333 (18%), Positives = 112/333 (33%), Gaps = 46/333 (13%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L++ R ++ P + ILV G GKTT + K + EH + LEY + Sbjct: 1 SSILSDVSTRS----SSKLPSGKNILVFGEDGSGKTTLMAK-LEGAEHNKKGR-GLEYLY 54 Query: 96 GRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + NVW L + LL+ + L + ++D+S+P L+ Sbjct: 55 LSVHDEDRDDLTRCNVWILDGDLYHKGLLKFAVSAKSLSDCLAVFVVDMSRPWIIMDSLQ 114 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK---------------------- 192 LRD ++ K+ P++ +EQ+ V+ + ++ Sbjct: 115 KWSSVLRDHLDKL--KIEPDVMREMEQKMVKAFQEYSEPEDANSSSPQRRAPTAGEDEAV 172 Query: 193 -----DSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGALL 241 ++ L PV++V K D S + +R G L Sbjct: 173 VLPLGENTLTHNLGIPVLVVCTKCDAVSVLEKEHDYKEEHFDFIQSHIRKFCLQYGAGLF 232 Query: 242 FYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSV 301 + S K K +L I H + +V + + I G D+ KI + Sbjct: 233 YTSVKEEKNLDLLYKYIVHKLY--DFQFTTPALVVEKDAVFIPSGWDNEKKIAILHEN-L 289 Query: 302 ERIGATFG-MEVPQLQLEKQKLKETTDPAKDPG 333 + + ++ + E A+D Sbjct: 290 STVRPEDPFEDFIAKPPVRKLVHEKEINAEDEQ 322 >gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein, partial [Gallus gallus] Length = 388 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 106/299 (35%), Gaps = 45/299 (15%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L+E R R + P +TILVLG GKTT + K EH + LEY + Sbjct: 1 SSILSEVSTRSR----SKLPSGKTILVLGDNGSGKTTLMAK-LQGAEHGQKGR-GLEYLY 54 Query: 96 GRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + NVW L ++ LL+ + LQ VI ++D+S+P LE Sbjct: 55 LNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWTVMESLE 114 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------------------ 190 LR+ ++ K+ PE ++Q+ ++ + Sbjct: 115 KWAGVLREHIDKL--KIPPEEMRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQENAS 172 Query: 191 ----NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGAL 240 ++ L PV++V K D S + +R G AL Sbjct: 173 VSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQYGAAL 232 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 ++ S K K +L + H +G +V + + I G D+ KI Sbjct: 233 IYTSVKGEKNLDLLYKYLVHKMYG--FQLTTPALVVEKDAVFIPAGWDNEKKIAILHEN 289 >gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 3 [Canis familiaris] Length = 225 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 15/222 (6%) Query: 153 LECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGG 209 +E + + +M+ K+ + + Q+ + + + D E +DP P++I+G Sbjct: 1 MENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIPLVIIGS 60 Query: 210 KYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 61 KYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-VRGVINQLAFGIDKS- 118 Query: 270 FRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-------Q 320 +S VD N+PL I G DS S+IG + ++ A M++ + E+ Sbjct: 119 -KSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVFPPKSTN 177 Query: 321 KLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 178 TLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWK 219 >gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632687|emb|CAM56700.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 489 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 105/312 (33%), Gaps = 44/312 (14%) Query: 22 TEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 +E Q++ L+E R R + P + ++V+G GKTT + K Sbjct: 19 SESQNPEEEDGQNLWSSILSEVSTRSR----SKLPSGKNVVVMGEVGSGKTTLVAK-LQG 73 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + LEY + Q N W L + L + + L+ ++ Sbjct: 74 VEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 132 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------- 190 ++DLS+P L+ +RD ++ +V PE LE R ++ + Sbjct: 133 VVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPGSDLDA 190 Query: 191 -----------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCR 227 ++ L P+++V K D S + Sbjct: 191 VPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQS 250 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G ALL+ S K K +L + H +G P + V + + I G Sbjct: 251 HIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS--PAQVVEKDSVFIPSGW 308 Query: 288 DSWSKIGDTGAQ 299 D+ KI Sbjct: 309 DNEKKIAILHEN 320 >gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] Length = 485 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 105/312 (33%), Gaps = 44/312 (14%) Query: 22 TEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 +E Q++ L+E R R + P + ++V+G GKTT + K Sbjct: 15 SESQNPEEEDGQNLWSSILSEVSTRSR----SKLPSGKNVVVMGEVGSGKTTLVAK-LQG 69 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + LEY + Q N W L + L + + L+ ++ Sbjct: 70 VEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 128 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------- 190 ++DLS+P L+ +RD ++ +V PE LE R ++ + Sbjct: 129 VVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPGSDLDA 186 Query: 191 -----------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCR 227 ++ L P+++V K D S + Sbjct: 187 VPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQS 246 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G ALL+ S K K +L + H +G P + V + + I G Sbjct: 247 HIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS--PAQVVEKDSVFIPSGW 304 Query: 288 DSWSKIGDTGAQ 299 D+ KI Sbjct: 305 DNEKKIAILHEN 316 >gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light intermediate chain 1 [Danio rerio] gi|94733316|emb|CAK11123.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632686|emb|CAM56699.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 501 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 105/312 (33%), Gaps = 44/312 (14%) Query: 22 TEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 +E Q++ L+E R R + P + ++V+G GKTT + K Sbjct: 21 SESQNPEEEDGQNLWSSILSEVSTRSR----SKLPSGKNVVVMGEVGSGKTTLVAK-LQG 75 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + LEY + Q N W L + L + + L+ ++ Sbjct: 76 VEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLEDSLILF 134 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------- 190 ++DLS+P L+ +RD ++ +V PE LE R ++ + Sbjct: 135 VVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPGSDLDA 192 Query: 191 -----------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCR 227 ++ L P+++V K D S + Sbjct: 193 VPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHLDFIQS 252 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G ALL+ S K K +L + H +G P + V + + I G Sbjct: 253 HIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS--PAQVVEKDSVFIPSGW 310 Query: 288 DSWSKIGDTGAQ 299 D+ KI Sbjct: 311 DNEKKIAILHEN 322 >gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon nigroviridis] Length = 400 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 60/327 (18%), Positives = 103/327 (31%), Gaps = 41/327 (12%) Query: 38 RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGR 97 L+E R + P + +LV+G GKTT + K + + LEY + Sbjct: 3 ILSEVSTHSR----SKLPSGKNVLVMGEVGSGKTTLVAK-LQGVDEYMKGR-GLEYLYFS 56 Query: 98 RIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECA 156 N W L + L V + + +++ +D+S+P L+ Sbjct: 57 VHDDDIDDHARCNAWVLDGDLYHKGLQGVAVPVDSIGNTLLLITVDMSRPWNALDSLQKW 116 Query: 157 YKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------------------NK 192 R+ ++ +V PE LE V++ + Sbjct: 117 AAVAREHIDKL--RVAPETLRELEHNLVKQFQEYVEPGSGEDGTPQRRSEDEESILLPLG 174 Query: 193 DSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGGALLFYSQK 246 DS L PV++V K D + LR G +L++ S K Sbjct: 175 DSTLTHNLGIPVVVVCTKCDAIGTLEKEHDYRDEHLDFIQSHLRRFCLQYGASLVYTSVK 234 Query: 247 MPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGA 306 K +L + H +G P V + + I G D+ KI Sbjct: 235 EMKNLDILYKYLVHRLYGFPFPC--PAQVVERDAVFIPSGWDNEKKIAILHENFQTFKSD 292 Query: 307 TFGMEVPQLQLEKQKLKETTDPAKDPG 333 +V ++ + E A+D Sbjct: 293 DTFEDVIVKPPVRKIVHEKEIQAEDDQ 319 >gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A isoform 1 [Pan troglodytes] Length = 472 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 65/332 (19%), Positives = 108/332 (32%), Gaps = 45/332 (13%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 AGR E + T P G GKT+ I K E + LEY + Sbjct: 2 AGREGEHETLDPGPAGTRPPS-------GEDGAGKTSLIRKI-QGIEEYKKGR-GLEYLY 52 Query: 96 GRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + Q NVW L + LL+ + L+ V+L++D+S+P L+ Sbjct: 53 LNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSLQ 112 Query: 155 CAYKGLRDTAQQMM----------EKVTPELREILE---------QRTVERVGQQNKDSE 195 +R+ ++ +K+ + +E +E QR + DS Sbjct: 113 KWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKDDSV 172 Query: 196 --------KLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGALL 241 L PV++V K D S + +R G AL+ Sbjct: 173 VLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALI 232 Query: 242 FYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSV 301 + S K K ++ I +G VV + + I G D+ KIG Sbjct: 233 YTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDNDKKIGILHENFQ 290 Query: 302 ERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 ++ ++ + E A+D Sbjct: 291 TLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 322 >gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin light chain A [Ornithorhynchus anatinus] Length = 471 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 103/306 (33%), Gaps = 42/306 (13%) Query: 64 GSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQL 122 G GKT+ I K + + +EY + + Q NVW L + L Sbjct: 21 GEDGAGKTSLIGK-MQGIDEYKKGR-GMEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGL 78 Query: 123 LEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQR 182 L+ M + L+ V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ Sbjct: 79 LKFAMDANSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQK 136 Query: 183 TVERV---------------------GQQNKDSE--------KLDPLPFPVIIVGGKYDV 213 + + DS L PV++V K D Sbjct: 137 LIRDFQEYIEPGEDFPASPQRRNTTSQEDKDDSVILPLGADTLTYNLGIPVLVVCTKCDA 196 Query: 214 FSGFDP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA 267 S + +R G AL++ S K K ++ I +G P Sbjct: 197 ISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPF 256 Query: 268 HPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTD 327 VV + + I G D+ KIG ++ ++ + E Sbjct: 257 --KIPAVVVEKDAVFIPAGWDNDKKIGILHENFQTLKAEDSFEDIIIKPPVRKFVHEKEI 314 Query: 328 PAKDPG 333 A+D Sbjct: 315 VAEDDQ 320 >gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosophila melanogaster] gi|24641224|ref|NP_727500.1| Dlic2 CG1938-PC, isoform C [Drosophila melanogaster] gi|24641226|ref|NP_727501.1| Dlic2 CG1938-PD, isoform D [Drosophila melanogaster] gi|16182605|gb|AAL13531.1| GH06357p [Drosophila melanogaster] gi|22832089|gb|AAF48011.2| CG1938-PA, isoform A [Drosophila melanogaster] gi|22832090|gb|AAN09288.1| CG1938-PC, isoform C [Drosophila melanogaster] gi|22832091|gb|AAN09289.1| CG1938-PD, isoform D [Drosophila melanogaster] Length = 493 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 111/352 (31%), Gaps = 45/352 (12%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEY 93 ++ + E ++ +T P +++LVLG GKTT I K E + + LEY Sbjct: 29 NLWSAILNE---VQTQGSTKLPSNKSVLVLGDNATGKTTLIAK-LQGVEDPKKGS-GLEY 83 Query: 94 SFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTD 152 ++ + + VW L LL + VIL + ++QP + Sbjct: 84 AYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQPWGWLEQ 143 Query: 153 LECAYKGLRDTAQQMMEKV-TPELREILEQRTVERVGQQNKDSE---------------- 195 L K L + E T + + D + Sbjct: 144 LNHWIKVLGQHIDSLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRTMRNNSIDE 203 Query: 196 ----------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGGA 239 + L +++V K D + + + +R+ G + Sbjct: 204 DDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLRHGTS 263 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 L + S K K VL + H +G P +V + + I G DS KI Sbjct: 264 LFYTSVKEDKNCDVLYKYLTHRIYGLPFRT--PALVVEKDAVLIPAGWDSLKKISILYEN 321 Query: 300 SVERIGATFG-MEVPQLQLEKQKLKETTDP--AKDPGFKELVIDEIRSQKNE 348 + + A ++ + ++ + +D EI Q ++ Sbjct: 322 -MHGVKAENPYTDIIKSPPTRKAVSNREAEVQTEDEQAFLARQQEILKQGDQ 372 >gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein light intermediate chain 2, partial [Equus caballus] Length = 490 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 68/354 (19%), Positives = 105/354 (29%), Gaps = 48/354 (13%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 15 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 70 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 71 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 128 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 129 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEEMRELERKFVKDFQDYIEPE 186 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------ 219 D+ L PV++V K D S + Sbjct: 187 EGCQGSPQRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 246 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL+ S K K + I H P Sbjct: 247 EHFDFIQSHLRRFCLQYGAALIDTSVKEAKSLDLKNKCIIHPTSNDPVTSPGKASQSLFA 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 G D+ KI + ++ + + A+D Sbjct: 307 --FRPAGWDNEKKIAILHENFTTVKPEDVYEDFIVKPPVRKLVHDKELAAEDEQ 358 >gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoobscura] gi|54643019|gb|EAL31763.1| GA15140-PA [Drosophila pseudoobscura] Length = 499 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 63/353 (17%), Positives = 115/353 (32%), Gaps = 45/353 (12%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEY 93 ++ + E ++ +T P +++LVLG GKTT I K E + + LEY Sbjct: 31 NLWSAILNE---VQTQGSTKLPANKSVLVLGDNATGKTTLIAK-LQGVEDPKKGS-GLEY 85 Query: 94 SFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTD 152 ++ + + VW L LL + VIL + ++QP + Sbjct: 86 AYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHFALNETNYAHTLVILTVSMTQPWGWLEQ 145 Query: 153 LECAYKGLRDTAQQM-MEKVTPELREILEQRTVERVGQQNKDSE---------------- 195 L K L + + +E E+ T + + D + Sbjct: 146 LNHWIKVLGQHIESLPLEAKDKEMARQRLATTWQSYCEVGDDLDPGSPVKRTMRNNSIDE 205 Query: 196 ----------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGGA 239 + L +++V K D + + + +RS G + Sbjct: 206 DDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRSFCLRTGAS 265 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 L + S K K +L + H +G P +V + + I G DS KI Sbjct: 266 LFYTSVKEDKNCDLLYKYLTHRIYGLPFRT--PALVVEKDAVLIPAGWDSLKKISILYEN 323 Query: 300 SVERIGATFGM-EVPQLQLEKQKLKETTDP--AKDPGFKELVIDEIRSQKNEE 349 + I A +V + ++ + +D EI Q ++ Sbjct: 324 -MHGIKAESPYSDVIKAPPTRKAVSNREVEVQTEDEQTFLARQQEILKQAGQD 375 >gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974436|ref|XP_001184479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 483 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 116/343 (33%), Gaps = 57/343 (16%) Query: 21 RTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + E+ Q++ + + ++ P ++ILVLG GKTT +++ Sbjct: 12 SSAEKENDDDEPQNLWTSIL---SEVSSHSSSKLPSCKSILVLGEDETGKTTLLSR-LQG 67 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + LEY + + VW L + E LL + L+ + VI+ Sbjct: 68 VEDPKKG-YGLEYLYLDVRDEDRDDTTRCGVWILAGENEHEDLLRYALTADNLEHMLVII 126 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK------- 192 +D+ +P L+ + +R + ++ PE LEQR V++ + Sbjct: 127 AVDMCRPWNIMDSLQKWTQVIRRHVDSL--RIPPEKLRELEQRLVQQFQAYTEPETGQDS 184 Query: 193 --------------------------DSEKLDPLPFPVIIVGGKYDVFSGFDPII----- 221 ++ L P+++V K D + + Sbjct: 185 SVTRRTSGVTKPTGAEDEEAVVLPLGETTLTHNLGVPIVVVVTKSDYVNTLEKEQDYSDE 244 Query: 222 -RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP 280 + +R G AL + S K K +L + H + P + + +V + Sbjct: 245 HLDFLQQNVRKFCLNYGAALFYVSVKENKNCDLLNRYLLHRLYDFPFNS--AALVVEKDA 302 Query: 281 LCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLK 323 L + G D+ K+ A P+ ++ +K Sbjct: 303 LFVPSGWDNLQKVSILYEN-----MANID---PEKPYDEVIIK 337 >gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermediate chain [Tetrahymena thermophila] Length = 474 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 86/354 (24%), Positives = 157/354 (44%), Gaps = 41/354 (11%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN--KFFDREE 82 G+ + + A E+ L+Q A E+T++V+G K GKTT +N K + + Sbjct: 18 GDRSNIDLWSHA-----EESELKQGFAKNL--EKTLVVIGDKGSGKTTFVNILKNMQQVD 70 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLD 142 PT+ L+Y + RR + + ++++ +ELG +++ +P+ + IL+LD Sbjct: 71 DRYIPTVGLDYQYVRRTNANR-KELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLD 129 Query: 143 LSQPQRFWTDLECAYKGLRDTAQ--QMMEKVTPELREIL---EQRTVERVGQQNKDSEKL 197 LS+P + ++ +R + TPE + E R + D ++ Sbjct: 130 LSKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQARFES-HPDKNRV 188 Query: 198 DPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDT 257 LP I++G KYD+F D RK R LR +AH+ G +L F S K L + +R Sbjct: 189 KILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSKNNDLFQNVRSI 248 Query: 258 ICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQL 317 + + FG + + + P+ I D +K+G + L+ Sbjct: 249 MNNALFGKTL--AQYYQSEHLRPIEISLSKDELAKMGLP----------QISGNMTYLEA 296 Query: 318 EKQKLKET--------TDPAKDP-----GFKELVIDEIRSQKNEELAGLMRDVL 358 K+ ++ET D ++DP F E ID IR++K++E+ + ++ + Sbjct: 297 FKKVIQETFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKEFM 350 >gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, isoform A [Tribolium castaneum] Length = 475 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 106/324 (32%), Gaps = 55/324 (16%) Query: 17 MFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINK 76 M + + + + ++ L++ Q P + +LVLG GKTT + K Sbjct: 1 MPEEVAKPTDDSKKNLWS--QILSDVQ----NNGNPKLPSCKQVLVLGDNECGKTTIVAK 54 Query: 77 FFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQL 135 E + + LEY++ + Q ++VW L LL+ + Q Sbjct: 55 -LQGVEDPKKGS-GLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHTDLLKFALNEETFQHT 112 Query: 136 AVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE----- 180 VIL + ++ P L+ L D ++ + + +E +E Sbjct: 113 LVILTVTMTAPWSILEQLQHWASVLADHLDKLKLDVDLRQNRRQHIVKMWQEYVEPGDEL 172 Query: 181 ------QRTVERVGQQNKDSE---------KLDPLPFPVIIVGGKYDVFSGFDPI----- 220 +R+ G E + L +++V K D + Sbjct: 173 DPASPMKRSSRNFGDGEDGLEEQTSLPEGTLTNNLGLDIVVVVTKTDYIQTLEKEHDYRD 232 Query: 221 -----IRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVV 275 +++ R G AL + S K K +L + H +G P +V Sbjct: 233 EHLDFMQQWI----RKFCLQYGAALFYTSAKEDKNCDLLYKYLTHRIYGFPFRT--PALV 286 Query: 276 DFNEPLCIWFGTDSWSKIGDTGAQ 299 + + I G D+ +KI Sbjct: 287 VEKDAVFIPAGWDNMNKIRILYEN 310 >gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938-PA, isoform A [Apis mellifera] Length = 470 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 105/317 (33%), Gaps = 45/317 (14%) Query: 17 MFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINK 76 K+ E E+ ++ LAE Q + P + ILVLG GKTT I K Sbjct: 15 FHSKKKEDPENKD-NLWS--SILAEVQNSS----SNKLPSNKNILVLGDNESGKTTLIAK 67 Query: 77 FFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQL 135 E + + LE+++ + Q ++VW L LL + Sbjct: 68 -LQGVEDPKKGS-GLEFAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLRFALNAERFPHT 125 Query: 136 AVILMLDLSQPQRFWTDLECAYKGLRDTAQQM-MEKVTPELREILEQRTVERVGQQ---- 190 V+L+ ++ P L+ L D ++ ++ T + L + + + Sbjct: 126 LVMLVAAMTTPWAILDQLQSWAALLGDHIDKLPLDNDTWQRCRQLNVKKWQDYTEPGDEL 185 Query: 191 -----------NKDSEKLDPLPFP-----------VIIVGGKYDVFSGFDP------IIR 222 N D + +D LP P V++V K D S + Sbjct: 186 DPGSPLRRTSRNLDDDTMDNLPLPEGVLTTNLGLDVVVVITKTDYMSTLEKEHDYKDEHF 245 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 + +R G L + S K K +L + H + P +V + + Sbjct: 246 DFIQQWIRRFCLQYGAGLFYTSAKEDKNCDLLYKYLTHRIYSLPFRT--PALVVEKDAVL 303 Query: 283 IWFGTDSWSKIGDTGAQ 299 I G D+ KI Sbjct: 304 IPAGWDNMKKISILHEN 320 >gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] gi|31376209|gb|AAO12154.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|33334344|gb|AAQ12259.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|47680185|gb|AAT37069.1| dynein 1b light intermediate chain [Chlamydomonas reinhardtii] gi|158276532|gb|EDP02304.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] Length = 427 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 72/363 (19%), Positives = 136/363 (37%), Gaps = 35/363 (9%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEH 83 A + I + E R+ + +GS+ GK+T +N+F Sbjct: 8 PGQAVKTPGSIWAKAIEHANEERKKPGADGRGDAFCYFVGSRAAGKSTLLNRFLYPTRAE 67 Query: 84 ATRPTLALEYSFGRRIG--SGKSPQVMNVWELGSLDNAEQLL----EVPMRTHGLQQLAV 137 +P+ +EY++ R+ + + ++WE+G + + ++ + + V Sbjct: 68 VPKPSEGIEYTYARKPAAFDHEKKDLAHIWEVGGSQEFAEEIVNSDQLFLTAKQVTTAVV 127 Query: 138 ILMLDLSQPQRFWTDLECAYKGLR----DTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 ++++DLS P L + ++ T ++ EK +L E L QR ++ N+D Sbjct: 128 VIVVDLSDPAGVLPTLLYWVEQVKKKLGSTYEK-FEKKGLQLPEQLRQRAKSKLYSANED 186 Query: 194 SEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYS--------- 244 + + ++I KYD F DP ++K R LR +AH G L + S Sbjct: 187 KDTVYHSGISLVIAATKYDAFKNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLHGASEGS 246 Query: 245 -QKMPKLAKVLRDTICHLGF-GSPAHP-FRSH-VVDFNEPLCIWFGTDSWSKIGDTGAQ- 299 + L + HL F G P + +D P+ + G D++ +G +Q Sbjct: 247 GAEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSVGRPRSQG 306 Query: 300 ------SVERIGATFGMEVPQLQLEKQKLKETTDP--AKDPGFKELVIDEIRSQKNEELA 351 + F P EK+ +KE +D +R +K +L Sbjct: 307 EGTVAGGLAEWRELFEKMFPG-VREKEAKMSAKGAKFVIPEQYKEEEVDAVRQRKVTDLE 365 Query: 352 GLM 354 Sbjct: 366 NFR 368 >gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella vectensis] gi|156225136|gb|EDO45956.1| predicted protein [Nematostella vectensis] Length = 422 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 63/332 (18%), Positives = 126/332 (37%), Gaps = 45/332 (13%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L++ Q + P ++I+++G+ GKTT I+K +E+ ++ LEY++ Sbjct: 1 SSILSDVQSSA----SRKLPSHKSIILIGNDESGKTTLISKLRGKEDDISKGH-GLEYTY 55 Query: 96 GRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 +NVW L + LL+ + + + V++++D S+P L Sbjct: 56 LEVHDEEIDDYTRLNVWILDGDPRNKSLLKYALTPKHARDVLVVMVVDCSRPWAIMESLH 115 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD--------------------- 193 + LR+ + K++P+ +E++ V++ Sbjct: 116 SWTEILREHIHSL--KLSPKELNEMEEKIVQQFQDYTDTEEASDENRRRSGTKDEDKVVL 173 Query: 194 ----SEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGALLFY 243 + +D L P+I++ K D + + +R G AL + Sbjct: 174 PLEENVLVDNLGIPMIVLVTKTDCMLSLEKDRDFHDEHFDFIQQHIRRYCLKHGAALFYT 233 Query: 244 SQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVER 303 S K K + + H +G P + VVD + + I G DS KIG ++ Sbjct: 234 SVKENKNCNLFLKYVLHKIYGLPF-KSPALVVDKDS-VFIPSGWDSMKKIGILNE-HLKN 290 Query: 304 IG--ATFGMEVPQLQLEKQKLKETTDPAKDPG 333 I +F + ++ L+E A++ Sbjct: 291 IHPDDSFDDHI-IKPALRKPLQEKEITAEEEQ 321 >gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 233 Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 13/210 (6%) Query: 163 TAQQMMEKVTPELREILEQRTVERVGQQN-KDSEKLDPLPFPVIIVGGKYDVFSGFDPII 221 A++ + R +L ++ KD E +DP P P++I+G KYD+F FDP Sbjct: 21 HAKRHCSLLGTGWRNLLAGLNQHTNHSRHLKDRELIDPFPIPLVIIGSKYDIFQDFDPEK 80 Query: 222 RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPL 281 RK C+ LR +AH G +L+F S+ L K +R I L FG +S VD N+PL Sbjct: 81 RKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGIDKS--KSICVDQNKPL 137 Query: 282 CIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDP 332 I G DS +IG + ++ A ME+ + +K LK DPA+DP Sbjct: 138 FITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLFPPKSTGTLKAVQDPARDP 197 Query: 333 GFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + E +DE+R QK++EL R K Sbjct: 198 QYAESEVDEMRVQKDQELEHYKRSSSKTWK 227 >gi|157128066|ref|XP_001661298.1| dynein light intermediate chain [Aedes aegypti] gi|108872707|gb|EAT36932.1| dynein light intermediate chain [Aedes aegypti] Length = 494 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 106/325 (32%), Gaps = 47/325 (14%) Query: 13 RLQKMFVKRTEGGESATPSIQ-DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKT 71 ++ + ++ + ++ +T P +++LVLG GKT Sbjct: 8 TTSQVNGITATTPRKKDIDPKENLWSAIL---SEVQTQSSTKLPSNKSVLVLGDNASGKT 64 Query: 72 TAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTH 130 T I K E + + LEY++ + + VW L LL+ + Sbjct: 65 TLIAK-LQGVEDPKKGS-GLEYAYIDVRDEYRDDVTRLGVWILDGDPGHTNLLKYALNET 122 Query: 131 GLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ 190 VIL L ++ P + LE K L D + K+ PE R+ QR V Sbjct: 123 NYAHTLVILTLSMTTPWSWVDQLEHWIKMLDDHIAGL--KIDPEERQQCRQRLVTVWQSY 180 Query: 191 -------------------NKDSEKLDPLPFP----VIIVG-------GKYDVFSGFDPI 220 + + LD LP P +G K D + + Sbjct: 181 CDTIDELDPGSPIKRTNRLSSVDDDLDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKE 240 Query: 221 I------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 + + +R + G +L + S K K +L + H +G P + Sbjct: 241 LDYRDEHFDFMQQWIRRFCLVYGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRT--PAL 298 Query: 275 VDFNEPLCIWFGTDSWSKIGDTGAQ 299 + + + I G D+ KI Sbjct: 299 IVEKDAVLIPAGWDNMKKINILYEN 323 >gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] gi|89300006|gb|EAR97994.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] Length = 487 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 85/367 (23%), Positives = 157/367 (42%), Gaps = 54/367 (14%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN--KFFDREE 82 G+ + + A E+ L+Q A E+T++V+G K GKTT +N K + + Sbjct: 18 GDRSNIDLWSHA-----EESELKQGFAKNL--EKTLVVIGDKGSGKTTFVNILKNMQQVD 70 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLD 142 PT+ L+Y + RR + + ++++ +ELG +++ +P+ + IL+LD Sbjct: 71 DRYIPTVGLDYQYVRRTNANR-KELIHSYELGGGKEQSKMITIPISKQNFRDAFYILVLD 129 Query: 143 LSQPQRFWTDLECAYKGLRDTAQ--QMMEKVTPELREIL---EQRTVERVGQQNKDSEKL 197 LS+P + ++ +R + TPE + E R + D ++ Sbjct: 130 LSKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQARFES-HPDKNRV 188 Query: 198 DPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQ------------ 245 LP I++G KYD+F D RK R LR +AH+ G +L F S Sbjct: 189 KILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSNTQIHVLFNQHN 248 Query: 246 -KMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERI 304 + L + +R + + FG + + + P+ I D +K+G Sbjct: 249 KRNNDLFQNVRSIMNNALFGKTL--AQYYQSEHLRPIEISLSKDELAKMGLP-------- 298 Query: 305 GATFGMEVPQLQLEKQKLKET--------TDPAKDP-----GFKELVIDEIRSQKNEELA 351 + L+ K+ ++ET D ++DP F E ID IR++K++E+ Sbjct: 299 --QISGNMTYLEAFKKVIQETFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMK 356 Query: 352 GLMRDVL 358 + ++ + Sbjct: 357 AISKEFM 363 >gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae str. PEST] gi|157018577|gb|EAA06916.4| AGAP000723-PA [Anopheles gambiae str. PEST] Length = 470 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 103/301 (34%), Gaps = 47/301 (15%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L+E Q + T P +++LVLG GKTT I K E + + LEY++ Sbjct: 1 SSILSEVQTQSN----TKLPSNKSVLVLGDNASGKTTLIAK-LQGVEDPKKGS-GLEYAY 54 Query: 96 GRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + ++VW L LL+ + VIL L ++ P + L+ Sbjct: 55 IDVRDEYRDDVTRLSVWILDGDPGHNNLLKFALNEQNFPHTLVILTLSMTTPWSWVDQLQ 114 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQR---TVERVGQQNKDSE---------------- 195 K L D + K+ PE ++ + R + + D + Sbjct: 115 HWMKILDDHIAGL--KIDPEEKQQCQARLTTEWQNYCETIDDLDPGSPIKRTNRLPSVDD 172 Query: 196 -----------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGG 238 L V++V K D + + + + +R + G Sbjct: 173 ELDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQWIRRFCLMYGA 232 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA 298 +L + S K K +L + H +G P +V + + I G D+ KI Sbjct: 233 SLFYTSVKEDKNCDLLYKYLTHRIYGLPFRT--PALVVEKDAVLIPAGWDNMKKISILYE 290 Query: 299 Q 299 Sbjct: 291 N 291 >gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00000001598 [Nasonia vitripennis] Length = 486 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 51/339 (15%), Positives = 104/339 (30%), Gaps = 45/339 (13%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + + + ++ + +++ P + +LVLG GKTT I K E Sbjct: 21 DKSLENEDNLWSSIL---AQVQNSSNNKLPSNKNVLVLGDNESGKTTLIAK-LQGVEDPK 76 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + + LEY++ + Q ++VW L LL+ + V+L+ ++ Sbjct: 77 KGS-GLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLKFALNAKRFPNTLVMLVAAMT 135 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVT---PELREILEQ--RTVERVGQQNKDSE---- 195 P L+ + L D ++ ++ +Q + + + D + Sbjct: 136 TPWALLDQLQFWSRVLGDHIDKLASDNDDFKQTWQDCRQQIKKKWQDYTEPGDDLDPGSP 195 Query: 196 ----------------------KLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCR 227 L +++V K D S + + Sbjct: 196 LRRTSRNLDDESVDNLPLPDGVLTTNLGLDIVVVITKTDYMSTLEKEHDYRDEHFDFMQQ 255 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G L + S K K +L + H + P +V + + I G Sbjct: 256 WIRRFCLQYGAGLFYTSVKEDKNCDLLYKYLTHRIYSLPFRT--PALVVEKDAVLIPAGW 313 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETT 326 D+ KI + +V +K + Sbjct: 314 DNMKKISILHENLQSMKPDDYYRDVIVKPPSNRKSVQRQ 352 >gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] Length = 433 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 53/270 (19%), Positives = 89/270 (32%), Gaps = 39/270 (14%) Query: 63 LGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQ 121 +G GKTT + K E + LEY + Q N W L + Sbjct: 1 MGEVGSGKTTLVAK-LQGVEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKG 58 Query: 122 LLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQ 181 L + + L+ ++ ++DLS+P L+ +RD ++ +V PE LE Sbjct: 59 LQKFAISLENLEDSLILFVVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEH 116 Query: 182 RTVERVGQQ--------------------------NKDSEKLDPLPFPVIIVGGKYDVFS 215 R ++ + ++ L P+++V K D S Sbjct: 117 RLTKQFQEYVEPGSDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAIS 176 Query: 216 GFDP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 + +R G ALL+ S K K +L + H +G P + Sbjct: 177 TLEKEHDYKDEHLDFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS 236 Query: 270 FRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 V + + I G D+ KI Sbjct: 237 --PAQVVEKDSVFIPSGWDNEKKIAILHEN 264 >gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_a [Rattus norvegicus] Length = 455 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 64/349 (18%), Positives = 105/349 (30%), Gaps = 75/349 (21%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKDFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 D+ L PV++V K D S + + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKE-HDYR 247 Query: 226 CRCLRSM-AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 L + AHL G L F + + I Sbjct: 248 DEHLDFIQAHLRGFCLQF---------------------------------VEKDAVFIP 274 Query: 285 FGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 G D+ KI + ++ + + A+D Sbjct: 275 AGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 323 >gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_b [Mus musculus] Length = 458 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 60/354 (16%), Positives = 100/354 (28%), Gaps = 82/354 (23%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------ 219 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 248 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR I + + Sbjct: 249 EHLDFIQAHLRRFCLQ---------------------CILGML---------------KD 272 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + I G D+ KI + ++ + + A+D Sbjct: 273 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQ 326 >gi|123415018|ref|XP_001304608.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121886072|gb|EAX91678.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 287 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 69/329 (20%), Positives = 119/329 (36%), Gaps = 50/329 (15%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 + P +DI G L E+ + + +E+ L +GS+ GK+ N+FF R + Sbjct: 2 NVDPK-RDIWGALINEKASSLK---SGVNEEKHFLFVGSEKSGKSCLQNQFFSRRDEPPE 57 Query: 87 PTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLAL Y V++ WE+GS +QL+ + L+ + ++++P Sbjct: 58 -TLALSYQSASV-RQDDKEVVLHFWEIGSGTKLDQLINTIVTKETLKDFNAFICFNVNKP 115 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVII 206 T + D A+ ++ K + + + Sbjct: 116 SSILTAI--------DWAENLISKFAYKSQS--------------------------IYF 141 Query: 207 VGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 +G YD F DP + +T + LR++A L+F S K LA + I L G Sbjct: 142 IGTFYDTFESNDPSQKINTVQGLRAIASKYHAGLIFTSYKDDNLANRFKGLIRQLALGET 201 Query: 267 AHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETT 326 P + P+ I +D G I + + ++ + + Sbjct: 202 --PTGEIITQHISPVFILPDSDKEC-----GGNE---IISPYVRQLKSAPPDDDAQAASK 251 Query: 327 DPAKDPGFKELVIDEIRSQKNEELAGLMR 355 D F E IDE+ K EL +R Sbjct: 252 DDPTSSKFAEKEIDELAETKERELEEKLR 280 >gi|123423641|ref|XP_001306418.1| conserved hypothetical protein [Trichomonas vaginalis G3] gi|121887991|gb|EAX93488.1| conserved hypothetical protein [Trichomonas vaginalis G3] Length = 286 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 72/328 (21%), Positives = 122/328 (37%), Gaps = 45/328 (13%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 + + D+ G++ E + + + +L +G + GK++ IN+FF R + Sbjct: 2 NPDNVVNDLWGQIIEHETEPIKPYGAG---DSHVLFVGGEQSGKSSLINQFFGRGDSTY- 57 Query: 87 PTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 PTLAL Y +G +V++ WELG E L+ + V + DLS+ Sbjct: 58 PTLALAYQCCNLKVNG-KEKVLHFWELGGGVQMESLIPTIATEDTISGFVVFVCFDLSKS 116 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVII 206 LE +IL+ R ++ + + Sbjct: 117 ASIIESLE--------------------WLDILQMRLKDKQN--------------AIFL 142 Query: 207 VGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 G YD+F P ++ + LRS+A L+F S KM L ++ I ++ + Sbjct: 143 AGTHYDLFESKSPQDKEIIVQGLRSIAAEHKVGLVFTSSKMETLINRFKNVIKYVCIAN- 201 Query: 267 AHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETT 326 R VDF P+ + G D+ + T Q V + E+ + +K Sbjct: 202 -SNVREKSVDFFNPVIVGPGADTELQ---TSGQEVADMMNKLSAEIAIEKRDKSS-NSLK 256 Query: 327 DPAKDPGFKELVIDEIRSQKNEELAGLM 354 + DPG E ID + K EL Sbjct: 257 NVITDPGLAEEDIDSLYLAKKAELNSKK 284 >gi|71399589|ref|XP_802821.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70865007|gb|EAN81375.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 286 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 20/244 (8%) Query: 22 TEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDRE 81 + +D+ + L E T E +L++G+ GKT+ + + F Sbjct: 48 PGMPQVTVDPTKDLWQNII-----LNTRENQVTQTEVNVLIVGTSGSGKTSLLRRIFSGV 102 Query: 82 EHAT----------RPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHG 131 ++ +PT AL+YSF RR + QV + WEL QL EV + Sbjct: 103 NTSSSSVPKSFLRVKPTTALDYSFVRRNDRHIA-QVAHFWELAQGMELSQLCEVVITPEN 161 Query: 132 LQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE---LREILEQRTVERVG 188 + + + +++D S+P W + K + ++ +K+ + + L R VG Sbjct: 162 VHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVG 221 Query: 189 QQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMP 248 ++ D +L P +I+ K D F+G + + K R +R +AH+ G L+F S Sbjct: 222 MEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAEA 280 Query: 249 KLAK 252 + Sbjct: 281 IKLR 284 >gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Coprinopsis cinerea okayama7#130] Length = 513 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 61/350 (17%), Positives = 118/350 (33%), Gaps = 65/350 (18%) Query: 20 KRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD 79 R E+ ++ D L + + + + I++LG GK+T + Sbjct: 4 SRPSSPEAPPENLWD---------SILNSVSTSRSIPAKQIILLGQPSTGKSTIASALLQ 54 Query: 80 R---EEHATRPTL--ALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHG-LQ 133 + +E+ + A+ Y F + S + LL + L Sbjct: 55 KNVSDENKDDGRIDFAVGYEFADVKDEEG--RSSRYLMPSSSHSYTNLLPHFVPPRTALP 112 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 V+++LD ++P F +L+ + + D A+ + +RE +R Sbjct: 113 HTCVVIVLDWTRPWTFIEELQSWLQWVEDWAKGDGSREVEIVREENRERR--------PG 164 Query: 194 SEKLDPLPFPVIIVGGKYDVFSG--------------FDPIIR-KHTCRCLRSMAHLIGG 238 + + P+I+V K D+ + R + LR++ G Sbjct: 165 TLTHNASGVPIIVVCSKADLIDDGPEIAAGAMVKGKGGEWEERTDGIMQVLRTICLKYGA 224 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAH--------PFRSHVVDFNEP-------LCI 283 LL+ + L ++LR HL F PA P ++ ++P + + Sbjct: 225 GLLYTTPLPETL-QILRQYALHLLFMPPAPSPGMEAQVPMKNIFPFQHKPNTLDRDHILV 283 Query: 284 WFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 G DSW KIG F ++ ++ L+ +PG Sbjct: 284 PAGWDSWGKIGVLREG--------FDAKLWNE-AWERDLEGDQQSTTEPG 324 >gi|145535742|ref|XP_001453604.1| hypothetical protein GSPATT00019900001 [Paramecium tetraurelia strain d4-2] gi|124421326|emb|CAK86207.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 64/304 (21%), Positives = 128/304 (42%), Gaps = 19/304 (6%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV 107 Q+ + + + + G GK+T ++K + + L Y+ ++ V Sbjct: 12 QINVPQSQLQHSFVFCGQTQSGKSTIVSKLTS---QSIQEQAGLIYT-QQKTNIIGYQAV 67 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS-QPQRFWTDLECAYKGLRDTAQQ 166 + +E+ +QLL +P+ QQ + IL++DLS P + +++ ++ Sbjct: 68 LQYFEVSGQ-AFKQLLTLPLNKQSYQQYSYILVIDLSDNPHEILNVCNTEIRYIKEETEK 126 Query: 167 -MMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFS-GFDPIIRKH 224 + + + + + LE +++ + D ++ P P+IIVG KYD+FS D RK Sbjct: 127 KLQQSIDVDTFKQLELNIYDKI-MMHHDKNRIIPSYVPIIIVGWKYDLFSKNLDQESRKW 185 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 R LR +AH +L+F S + +L K + + D + LCI Sbjct: 186 ITRGLRYLAHSNNCSLVFGSNQDYQLVKQTLQY-------NVKPSAPIYQFDHLKQLCIT 238 Query: 285 FGTDSWSKIGDTGAQS--VERIGATFGMEVPQLQLEKQKLKETTDPAKD-PGFKELVIDE 341 +DS I + + ++ ++ + ++K K++ +D +KE ID Sbjct: 239 QLSDSIENINLPPSGNNPLDGFNKIIKDQIVAVVNNQKKKKQSKISEEDWDNYKEEKIDR 298 Query: 342 IRSQ 345 + Q Sbjct: 299 LIKQ 302 >gi|145509070|ref|XP_001440479.1| hypothetical protein GSPATT00009430001 [Paramecium tetraurelia strain d4-2] gi|124407696|emb|CAK73082.1| unnamed protein product [Paramecium tetraurelia] Length = 319 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 62/304 (20%), Positives = 128/304 (42%), Gaps = 19/304 (6%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV 107 Q+ + + + ++ G GK+T ++K ++ L Y+ ++ V Sbjct: 12 QINVPQSQLQHSFVLCGQPQSGKSTIVSKLTSQQIQDQA---GLIYA-QQKTNIIGYQAV 67 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS-QPQRFWTDLECAYKGLRDTAQQ 166 + +E+ +QLL +P+ QQ + +L++DLS P + +R+ ++ Sbjct: 68 LQYFEISGQ-AFKQLLTLPLNKQSYQQYSYVLVIDLSDNPHEILNVCNAEIRYIREETEK 126 Query: 167 -MMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFS-GFDPIIRKH 224 + + + + + LE +++ + D ++ PL P+IIVG KYD+FS D RK Sbjct: 127 KLQQSIDVDTFKQLELNIYDKI-MMHHDKNRIVPLYVPIIIVGWKYDLFSKNLDLESRKW 185 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 R LR +AH +L+F S + + + + D + +CI Sbjct: 186 ITRGLRYLAHTNNCSLVFGSNQDYQFVRQTLQYHV-------KPTASIYQYDHLKQICIT 238 Query: 285 FGTDSWSKIGDTGAQS--VERIGATFGMEVPQLQLEKQKLKETTDPAKD-PGFKELVIDE 341 +DS I + + ++ ++ + ++K K++ +D +KE ID Sbjct: 239 QLSDSIENINLPPSGNNPLDGFNKIIKDQIVAVVNNQKKKKQSKITEEDWNNYKEEKIDR 298 Query: 342 IRSQ 345 + Q Sbjct: 299 LIKQ 302 >gi|158602493|gb|EDP38908.1| dynein light intermediate chain, putative [Brugia malayi] Length = 469 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 117/354 (33%), Gaps = 64/354 (18%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + I L+E A T IL LG++ GK+ +N+ ++ E + Sbjct: 23 GNDDERIW--TQILSEVSANGMSNSAPGT-----ILFLGNRQSGKSWLLNR-LEKRETSG 74 Query: 86 RPTLALEYSFGRRIGSGKS------------------PQVMNVWELGSLDNAEQLLEVPM 127 R + ALEY F + + VW L L++ + Sbjct: 75 RGS-ALEYHFLNVHTDYRDVSYAYQLASAGAGVAPGESVTLPVWVLDGDVAFAPLVKFAL 133 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE---------LREI 178 L + VIL + +P L K + D + + +K T +E Sbjct: 134 T-APLSKSIVILCASMQEPGAVLPSLNKWVKVISDQIENIFDKATVIDARKSQELFWQEY 192 Query: 179 -------LEQRTVERVGQQNKDSEKLDPLPFP-----------VIIVGGKYDVFSGFDPI 220 ++ + + ++ S + LP +++V K D+ Sbjct: 193 VEPLDSSMQSDKIPSMETEHVRSHFVVLLPLEQNILTRNTGAALVVVLTKSDLAHNEMSD 252 Query: 221 IRKHTCRC-LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 + + +R G AL++ S K K +L + H G P + VVD + Sbjct: 253 EQLDRLQYHVRKFCMAHGAALVYTSAKEEKNTALLYKYVVHRVCGMPFT-TPAQVVDKDS 311 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 + + G D+ K+ + + M E+Q +++ A++ Sbjct: 312 -VFVPAGWDNEKKLDIIKEA-IPDVDHPLAM-----VRERQSMRDQIMEAEEEQ 358 >gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT00034450001 [Paramecium tetraurelia strain d4-2] gi|124399480|emb|CAK64972.1| unnamed protein product [Paramecium tetraurelia] Length = 425 Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats. Identities = 64/321 (19%), Positives = 122/321 (38%), Gaps = 29/321 (9%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP------ 87 ++ +L E+ R + +L+LG KC GK + ++ D + Sbjct: 6 NVWNQLLFEKSRQ------GGFINKNLLILGRKCSGKRSLLDALADVTKTLKNGIRQKGI 59 Query: 88 TLALEYSFGRRIG----SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 T ++Y++ I + +NV+ L + + LL + ++ V++ LD+ Sbjct: 60 TPIVDYAYLNLIDLRDPDYNTNARLNVYIL-EEEGQKYLLPQILNHKNIKNTFVVIALDM 118 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQN----KDSEKLDP 199 +P F DL+ L+D + +++ E ++ ++ + Q + + Sbjct: 119 QEPWTFMEDLDRWIGVLQDMMADL--RLSLNELEEMKSNVMQYMSQMDGGQAHEGLLKTN 176 Query: 200 LPFPVIIVGGKYDVFSGFDP-----IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVL 254 L P++++ K D+ D + CLR G LLF S K KV+ Sbjct: 177 LGIPLMVMVNKSDILERDDKGKDWDQKAEIIQFCLRQFCVNYGATLLFTSVKQKINIKVM 236 Query: 255 RDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQ 314 + + H + P + + E L I G D + I T + + VP Sbjct: 237 YEYVLHRLYNMPFETSQHKNLSDFESLFIPLGQDDINIIKSTF-TKLANNAIKYEESVPI 295 Query: 315 LQLEKQKLKETTDPAKDPGFK 335 +QL+K +KE D F Sbjct: 296 VQLKKNLVKEELTVEDDQEFF 316 >gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT00031450001 [Paramecium tetraurelia strain d4-2] gi|124395704|emb|CAK61219.1| unnamed protein product [Paramecium tetraurelia] Length = 435 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 124/321 (38%), Gaps = 29/321 (9%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD-----REEHATRP- 87 ++ +L E+ R + +++LG KC GK + ++ + + + Sbjct: 6 NVWNQLLFEKSRQ------GGFINKNLVILGRKCSGKRSLLDSLAEITKTHKNAIRQKGI 59 Query: 88 TLALEYSFGRRIG----SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 T ++Y+F I + +NV+ L + + LL + ++ V++ LD+ Sbjct: 60 TPIVDYAFLNLIDLRDPDYNTNARLNVYIL-EEEGQKYLLPQILNHKNIKNTFVVIALDM 118 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQN----KDSEKLDP 199 +P F DL+ L+D + +++ E ++ ++ + Q + + Sbjct: 119 QEPWTFMEDLDRWISVLQDMMADL--RLSLNELEEMKANVMQYMSQMDGGQAHEGLLKTN 176 Query: 200 LPFPVIIVGGKYDVFSGFDP-----IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVL 254 L P++++ K D+ D + CLR G LLF S K KV+ Sbjct: 177 LGIPLMVMVNKSDILERDDKGKDWDQKAEIIQFCLRQFCVNYGATLLFTSVKQKINIKVM 236 Query: 255 RDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQ 314 + + H + P + + E L I G D + I T + + + VP Sbjct: 237 YEYVLHRLYNMPFETSQHKNLSDFESLFIPLGQDDINIIKSTFTKLANGV-IKYEESVPV 295 Query: 315 LQLEKQKLKETTDPAKDPGFK 335 +QL+K +KE D F Sbjct: 296 VQLKKNLVKEELTVEDDQEFF 316 >gi|115398722|ref|XP_001214950.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191833|gb|EAU33533.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 508 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 64/350 (18%), Positives = 123/350 (35%), Gaps = 39/350 (11%) Query: 16 KMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG--SKCVGKTTA 73 ++ R G ++ PS +D + P E+ +L+L S + Sbjct: 6 QIPGSRFGAGNNSRPSSKDGPKKNIWSSLLDNVANGKRLP-EKNLLILDTLSANPSDPSL 64 Query: 74 INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSLD-NAEQLLEVPMRTH 130 ++ AL Y++ + + + + V + L + LL+ + Sbjct: 65 SDEKRKGRVPPVANQFALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTPQ 124 Query: 131 GLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTPELREILE--- 180 + + V+++LD S P + L + LR D + +ME++ E R+ Sbjct: 125 SIPETLVVILLDWSDPWTWVRRLREWVRLLRHVLVSLDDETKIVMEEMMTEWRDRKRGMD 184 Query: 181 -QRTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDP------IIRKHTCR 227 G + L P L P+ +V D + + Sbjct: 185 AAGAQGLSGSGGPVTMPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEEFDFILQ 244 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTI-CHLGFGS--PAHPFRSHVVDFNEPLCIW 284 LR++ G +L++ + P LA L+ I LG S + +V+D ++ + + Sbjct: 245 FLRTILLKHGASLIYTT---PFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILVP 300 Query: 285 FGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTD-PAKDP 332 DSW KI +E + + +E+ Q E D P +DP Sbjct: 301 SNWDSWGKIRIIREGFDMEGVSTAWSIEI-QDLPEPLTNGPADDKPEEDP 349 >gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosophila melanogaster] gi|22832093|gb|AAN09291.1| CG1938-PB, isoform B [Drosophila melanogaster] Length = 398 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 80/279 (28%), Gaps = 39/279 (13%) Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + VW L LL + VIL + ++QP + L K L Sbjct: 2 TRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQPWGWLEQLNHWIKVLGQHID 61 Query: 166 QMMEKV-TPELREILEQRTVERVGQQNKDSE--------------------------KLD 198 + E T + + D + + Sbjct: 62 SLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLLPLTEDALIT 121 Query: 199 PLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 L +++V K D + + + +R+ G +L + S K K Sbjct: 122 NLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLRHGTSLFYTSVKEDKNCD 181 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFG-ME 311 VL + H +G P +V + + I G DS KI + + A + Sbjct: 182 VLYKYLTHRIYGLPFRT--PALVVEKDAVLIPAGWDSLKKISILYEN-MHGVKAENPYTD 238 Query: 312 VPQLQLEKQKLKETTDP--AKDPGFKELVIDEIRSQKNE 348 + + ++ + +D EI Q ++ Sbjct: 239 IIKSPPTRKAVSNREAEVQTEDEQAFLARQQEILKQGDQ 277 >gi|29824427|ref|NP_056337.1| dynein 2 light intermediate chain isoform 2 [Homo sapiens] gi|16740931|gb|AAH16324.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|119620695|gb|EAX00290.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_b [Homo sapiens] Length = 201 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 8/186 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDS---EKLDPL 200 W +E + + +++ K+ + + Q+ + + + S L Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPVSCCLGLLLES 180 Query: 201 PFPVII 206 P I+ Sbjct: 181 LVPFIV 186 >gi|37590445|gb|AAH58823.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] Length = 201 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 8/186 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR+E ++P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PSKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDS---EKLDPL 200 W +E + + +++ K+ + + Q+ + + + S L Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPVSCCLGLLLES 180 Query: 201 PFPVII 206 P I+ Sbjct: 181 LVPFIV 186 >gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] gi|21615437|emb|CAC42262.2| Hypothetical protein C39E9.14b [Caenorhabditis elegans] gi|21684779|emb|CAD37351.1| Hypothetical protein C39E9.14b [Caenorhabditis elegans] Length = 441 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 53/335 (15%), Positives = 96/335 (28%), Gaps = 58/335 (17%) Query: 4 PLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVL 63 PL F + + T + I L + T T + T++VL Sbjct: 7 PLEFDDTANAVLPVLYSST------DEEVG-IWRELLASK-------KTNTNQGSTVIVL 52 Query: 64 GSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMN-------------- 109 G GK++ +++ D+ + +P L Y + Sbjct: 53 GDNRSGKSSLLSR-LDKSDRTVKPKSLLGYRVLHVQNDARDASYAYQLGTAGANLNPSEL 111 Query: 110 ----VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 VW L LL+ + + IL + P L+ + AQ Sbjct: 112 LQIPVWSLDGNAACASLLKHAL-PATPAEAIFILTASIDNPN-LIHSLKRWANVCTEQAQ 169 Query: 166 QMMEKVTPELREILEQRTVE----------------RVGQQNKDSEK-----LDPLPFPV 204 + K + +++ + ++ + Sbjct: 170 KHFTKEDLKAGRSQQEKMWQEYVDPVQSQMSTSVVGSFADEHNLLPLDQGTLTENCGVTF 229 Query: 205 IIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 ++V K D+ F LR +G L+F S K K ++L+ I H FG Sbjct: 230 MVVITKSDLGKEFTDAQFAKISIQLRKFCLSLGATLVFTSAKETKNIQLLQKYIVHRSFG 289 Query: 265 SPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 + + V E + + G D KI Sbjct: 290 TAFTS--AAQVIERESIFVPAGWDGEKKIDIIRES 322 >gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [Caenorhabditis briggsae] gi|39587719|emb|CAE58657.1| Hypothetical protein CBG01826 [Caenorhabditis briggsae] Length = 391 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 54/338 (15%), Positives = 106/338 (31%), Gaps = 58/338 (17%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGK 103 + + + T T + T++VLG GK++ + + D+ + +++P L Y + Sbjct: 33 REVLASKKTNTNQGSTVIVLGDNRCGKSSLLAR-LDKSDRSSKPKSLLGYRVLHVQNDAR 91 Query: 104 SPQVMN------------------VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 VW L ++ LL+ + ++ IL + Sbjct: 92 DASYAYQLGTAGANLNPSELLQIPVWSLDGNESCASLLKYAL-PATPSEVVFILSASIDN 150 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVE----------------RVGQ 189 P L+ + AQ+ K + ++R + Sbjct: 151 PN-LINSLKRWANVCTEQAQKHFSKEDLKAGRNQQERMWQEYVDPVQSHMSTSVVGSFAD 209 Query: 190 QNKDSEK-----LDPLPFPVIIVGGKYDVF--SGFDPIIRKHTCRCLRSMAHLIGGALLF 242 ++ ++ ++V K D+ F LR + +G L+F Sbjct: 210 EHSLLPLDQGTLIENCGVTFMVVITKSDLVLGKEFTDAQFAKISIQLRKLCLSLGATLIF 269 Query: 243 YSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE 302 S K K ++L+ I H FG+ + V + + + G D KI Sbjct: 270 TSTKESKNIQLLQKYIVHRSFGTAFTS--AAQVIERDSIFVPAGWDGEKKIDI------- 320 Query: 303 RIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVID 340 I + L+ + KL+ P E D Sbjct: 321 -IRESIPDADAALEPTRDKLR----PVAKEQLIEAEED 353 >gi|121713178|ref|XP_001274200.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] gi|119402353|gb|EAW12774.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] Length = 509 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 118/351 (33%), Gaps = 52/351 (14%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG-------------SKCVGK 70 G ++ PS +D + P E+ +L+LG S Sbjct: 2 SGNNSRPSSKDGPKKNIWSSMLDSVANGKRLP-EKNLLILGGTQDTQREFLETLSADTSD 60 Query: 71 TTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSLD-NAEQLLEVPM 127 +T I + AL Y++ + + + + V + L + LL+ + Sbjct: 61 STLIGEKRKGRVPPIANQFALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLL 120 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTPELREILE 180 + + V+++LD S P + L + LR D + +ME++ E R+ Sbjct: 121 TPQSVPETLVVILLDWSDPWTWIRRLREWVRLLRHVLFSLDDETKIVMEEIMTEWRDRKR 180 Query: 181 ------QRTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDP------IIR 222 + L P L PV +V D + Sbjct: 181 GMDSGSAGAQGLTSSGGPVTIPLGPGEWDEGLGIPVCVVCQGADKIEKLEKDHGWREEEF 240 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI-CHLGFGS--PAHPFRSHVVDFNE 279 + LR++ G +L++ + P LA L+ I LG S + +V+D ++ Sbjct: 241 DFILQFLRTILLKHGASLIYTT---PFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK 297 Query: 280 PLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEV--PQLQLEKQKLKETTD 327 + + DSW KI +E + + +E+ P L E D Sbjct: 298 -ILVPPNWDSWGKIRIIREGFDMEGVSTAWSIEIQDPPEPLPGSVHYEPQD 347 >gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150 [Aspergillus niger] gi|134076075|emb|CAK39434.1| unnamed protein product [Aspergillus niger] Length = 523 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 122/393 (31%), Gaps = 56/393 (14%) Query: 15 QKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGS--------- 65 + R G ++ PS +D + P E+ +L+LG Sbjct: 5 SQNPGSRFGTGNNSRPSSKDGPKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFL 63 Query: 66 ----KCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSLD-N 118 + N AL Y++ + + + V + L + Sbjct: 64 DTLAADSSDPSLSNDKRKGRVPPVANQFALGYTYQDVLDADHEDTLARVSAYLLSEPSLS 123 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREI 178 LL+ + + + V+++LD S P + L + LR ++ T + E Sbjct: 124 FAPLLKPLLTPQSIPETLVVILLDWSDPWTWIRRLREWVRLLR-HVLISLDDETKIVMEE 182 Query: 179 LEQRTVERVGQQNKDS-----------EKLDP---------LPFPVIIVGGKYDVFSGFD 218 +R + S P L P+ +V D + Sbjct: 183 NLTEWRDRKRGMDSSSGGAQGFTSSAGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKLE 242 Query: 219 P------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI-CHLGFGS--PAHP 269 + +R++ G +L++ + P LA L+ I LG S Sbjct: 243 KDHGWHEEQFDFILQFMRTLLLKHGASLIYTT---PFLANSLQSLIHSSLGIHSLLKRQS 299 Query: 270 FRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDP 328 + +V+D ++ + + DSW KI +E I + +E+ Q E D Sbjct: 300 LKHNVIDRDK-ILVPSNWDSWGKIRIIREGFDMEGISTAWSIEI-QDPPEP-LTNGVDDR 356 Query: 329 AKDPGFKELVID--EIRSQKNEELAGLMRDVLL 359 + D V D + + + RD + Sbjct: 357 SSDEQTANAVDDGTSAVAIFEQTIQDPKRDTSM 389 >gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] gi|21615436|emb|CAA94342.2| Hypothetical protein C39E9.14a [Caenorhabditis elegans] gi|21684778|emb|CAA97773.2| Hypothetical protein C39E9.14a [Caenorhabditis elegans] Length = 443 Score = 172 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 53/337 (15%), Positives = 96/337 (28%), Gaps = 60/337 (17%) Query: 4 PLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVL 63 PL F + + T + I L + T T + T++VL Sbjct: 7 PLEFDDTANAVLPVLYSST------DEEVG-IWRELLASK-------KTNTNQGSTVIVL 52 Query: 64 GSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMN-------------- 109 G GK++ +++ D+ + +P L Y + Sbjct: 53 GDNRSGKSSLLSR-LDKSDRTVKPKSLLGYRVLHVQNDARDASYAYQLGTAGANLNPSEL 111 Query: 110 ----VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 VW L LL+ + + IL + P L+ + AQ Sbjct: 112 LQIPVWSLDGNAACASLLKHAL-PATPAEAIFILTASIDNPN-LIHSLKRWANVCTEQAQ 169 Query: 166 QMMEKVTPELREILEQRTVE----------------RVGQQNKDSEK-----LDPLPFPV 204 + K + +++ + ++ + Sbjct: 170 KHFTKEDLKAGRSQQEKMWQEYVDPVQSQMSTSVVGSFADEHNLLPLDQGTLTENCGVTF 229 Query: 205 IIVGGKYDVF--SGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 ++V K D+ F LR +G L+F S K K ++L+ I H Sbjct: 230 MVVITKSDLVLGKEFTDAQFAKISIQLRKFCLSLGATLVFTSAKETKNIQLLQKYIVHRS 289 Query: 263 FGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 FG+ + V E + + G D KI Sbjct: 290 FGTAFTS--AAQVIERESIFVPAGWDGEKKIDIIRES 324 >gi|119479611|ref|XP_001259834.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] gi|119407988|gb|EAW17937.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] Length = 505 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 63/353 (17%), Positives = 124/353 (35%), Gaps = 54/353 (15%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG-------------SKCVGK 70 G ++ PS +D + + P E+ +L+LG S Sbjct: 2 SGNNSRPSSKDGSKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFIETLSADTSD 60 Query: 71 TTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSLD-NAEQLLEVPM 127 T I++ AL Y++ + + + + V + L + LL+ + Sbjct: 61 PTLISEKRRGRLPPVANQFALGYTYHDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLL 120 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTPELREILE 180 + + V+++LD S P + L + LR D + +ME++ E ++ Sbjct: 121 TPQSVPETLVVILLDWSDPWTWVRRLREWVRLLRHVLISLDDETKIVMEEIMTEWKD--R 178 Query: 181 QRTVERVGQQNKDS---EKLDP--------LPFPVIIVGGKYDVFSGFDP------IIRK 223 +R ++ Q S + P L P+ +V D + Sbjct: 179 KRGMDSGAQGLASSGGPVTIPPGPGEWDEGLGIPMCVVCQGADKIEKLEKEHGWREEEFD 238 Query: 224 HTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI-CHLGFGS--PAHPFRSHVVDFNEP 280 + +R++ G +L + + LA L+ I LG S + +V+D ++ Sbjct: 239 FILQFMRTILLKHGASLTYTTT---FLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK- 294 Query: 281 LCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPAKDP 332 + + DSW KI +E + + +E+ Q E L D +D Sbjct: 295 ILVPPNWDSWGKIRIIREGFDMEGVSTAWSIEI-QDAPEP--LTGAVDQPQDD 344 >gi|66801005|ref|XP_629428.1| dynein light intermediate chain [Dictyostelium discoideum AX4] gi|60462801|gb|EAL61001.1| dynein light intermediate chain [Dictyostelium discoideum AX4] Length = 504 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 51/333 (15%), Positives = 103/333 (30%), Gaps = 74/333 (22%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEY 93 DI G++ E + +LG GK+ ++KF + ++AL Y Sbjct: 10 DIWGQILRESSNKNNYFEKRD-----VAILGDPTSGKSLLLSKFDTVSNVESLKSIALSY 64 Query: 94 SFGRRIGSGKSPQ---VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFW 150 +F S +N W L + LL+ + ++ VI+ LD SQP Sbjct: 65 TFSDIYEDDTSEDPVGRINYWSLEGEASQNDLLKFSLNKENIKNCMVIITLDFSQPWNLV 124 Query: 151 TDLECAYKGLRDTA-----------QQMMEKVTPELREILEQR----------------- 182 L+ L + + + +K++ + E E Sbjct: 125 ESLKKWLGILEEHIKSIFKDDKNGFKNLQDKLSIKWHEYEEPTTTAATTTTTTTSNNIEN 184 Query: 183 -------TVERVGQQNKD-----------------------SEKLDPLPFPVIIVGGKYD 212 T +++ N + ++ L P+++ K D Sbjct: 185 NTNKTSPTTDKIQTNNVQKKKKKKVNISSAEDASVLPPLSENILINNLGVPILVACCKSD 244 Query: 213 VFSGFDP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 + + + + LR + G L++ S + V + I ++ FG Sbjct: 245 SVVMLEKDFDYKDELFDYIQQYLRRICLQYGAGLIYTSARKEINCGVTLEYIENILFGFE 304 Query: 267 AHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 + + + + G D+ +KI Sbjct: 305 LKSKT--QLIEKDQIFVPAGWDTLAKIQVDFEN 335 >gi|52546038|emb|CAH56157.1| hypothetical protein [Homo sapiens] Length = 209 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 67/176 (38%), Gaps = 11/176 (6%) Query: 18 FVKRTEGGESATPS-IQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDY 184 >gi|134106957|ref|XP_777791.1| hypothetical protein CNBA4890 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260489|gb|EAL23144.1| hypothetical protein CNBA4890 [Cryptococcus neoformans var. neoformans B-3501A] Length = 610 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 50/339 (14%), Positives = 100/339 (29%), Gaps = 87/339 (25%) Query: 58 RTILVLGSKCVGKTTAINKFFDREEHA-------------TRPT---------LALEYSF 95 + +++L + G+T +++ + + T LAL Y Sbjct: 58 KNVILLSERNHGRTHLLSQLTSSRKKKSAKPNSVFYWNGQPKSTSQPGDRRAGLALGYEV 117 Query: 96 GRRIGS--GKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDL 153 +P + + S + +L+ + L AV+++LD ++P +L Sbjct: 118 IDAGEEYSDSAPPISVFYPPSSHPSLLKLVPSALPPKSLADTAVMIVLDWTKPSSMLQEL 177 Query: 154 ECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDS------------------- 194 + A + E L +R + + S Sbjct: 178 LNWLSWVEAWA---LGSAEKGEIEELHERLQSYLQHYTEPSATNTGVTAYSGLGPLLPLG 234 Query: 195 ---EKLDPLPFPVIIVGGKYDVFSGFDPIIR----------KHTCRCLRSMAHLIGGALL 241 L+ P+I+V K D+ I + LR++ G AL Sbjct: 235 AGTLTLNSSGIPIIVVCTKADLMDNVAEEIGIKGGRWEERTDWVQQVLRTICLSYGAALF 294 Query: 242 FYSQKMPKLAKVLRDTICHLGFGSP--AHPFRSHVVDF---------------------- 277 + + P +L+ + H + P P + + D Sbjct: 295 YTAPTRPTTYSLLKSYLLHRLYTVPPSLSPAPTSLTDPSHIAPSPAQGVSTRYPFAHRAN 354 Query: 278 ---NEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEV 312 + + + G DSW KI ERI + + + Sbjct: 355 VLDRDAVMVPSGWDSWGKINVLREGFEPERIHKAWTVSL 393 >gi|115690607|ref|XP_001202918.1| PREDICTED: similar to Dynein, cytoplasmic 2, light intermediate chain 1, partial [Strongylocentrotus purpuratus] gi|115733494|ref|XP_788980.2| PREDICTED: similar to Dynein, cytoplasmic 2, light intermediate chain 1, partial [Strongylocentrotus purpuratus] Length = 170 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 54/170 (31%), Positives = 92/170 (54%), Gaps = 7/170 (4%) Query: 29 TPSIQDIAGRLAEEQ--QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 SI DIA AE++ ++ E IL +GSK GKT+ I +F ++ E A + Sbjct: 2 EKSIWDIAILEAEQKHATESKEQGGEAKGSENHILFIGSKNAGKTSIILRFLEK-EEAPK 60 Query: 87 PTLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 PT+ALEY+FGRR + ++WELG QL E+P+ + ++++++DLSQ Sbjct: 61 PTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDLSQ 120 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNK 192 P W +E KG D +Q++ K P++++ +++R +R+G + Sbjct: 121 PYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHP 170 >gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus oryzae] Length = 523 Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats. Identities = 62/395 (15%), Positives = 124/395 (31%), Gaps = 63/395 (15%) Query: 18 FVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG------------- 64 + G ++ PS +D + P E+ +L+LG Sbjct: 8 PGPKLGSGNNSRPSSKDGPKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFLDTL 66 Query: 65 SKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSLD-NAEQ 121 S + N AL Y++ + + + + V + L + Sbjct: 67 SADTSDPSLSNDRRKGRLPPVANQFALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAP 126 Query: 122 LLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTPE 174 LL+ + + + V+++LD S P + L + LR D + +ME+ E Sbjct: 127 LLKPLLTAQSVPETLVVILLDWSDPWTWVRRLREWVRLLRHVLISLDDETKIVMEETMTE 186 Query: 175 LREILE------QRTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDP--- 219 R+ + L P L P+ +V D + Sbjct: 187 WRDRKRGMDPSSTGAQGLTSSGGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHG 246 Query: 220 ---IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI-----CHLGFGSPAHPFR 271 + +R++ G +L++ + P L L+ + H + Sbjct: 247 WHEEEFDFILQFMRTILLKHGASLIYTT---PFLVNSLQSLLHSSLGIHSL--LKRQSLK 301 Query: 272 SHVVDFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEV--PQLQLEKQKLKETTDP 328 +V+D ++ + + DSW KI +E + + +E+ P L + D Sbjct: 302 HNVIDRDK-ILVPSNWDSWGKIRIIREGFDMEGVSTAWSIEIQDPPEPLSGSSM----DD 356 Query: 329 AKDPGFKELVID---EIRSQKNEELAGLMRDVLLR 360 AK G +D + + + RD + Sbjct: 357 AKPQGENAAGLDDGTSAVAIFEQTIKDPKRDASMT 391 >gi|39971217|ref|XP_366999.1| hypothetical protein MGG_03075 [Magnaporthe grisea 70-15] gi|149210811|ref|XP_001522780.1| hypothetical protein MGCH7_ch7g878 [Magnaporthe grisea 70-15] gi|86196833|gb|EAQ71471.1| hypothetical protein MGCH7_ch7g878 [Magnaporthe grisea 70-15] gi|145017071|gb|EDK01434.1| hypothetical protein MGG_03075 [Magnaporthe grisea 70-15] Length = 561 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 57/382 (14%), Positives = 121/382 (31%), Gaps = 68/382 (17%) Query: 22 TEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAI------- 74 +D+ + E P E+ +LVLG + + + Sbjct: 14 ASADSKDGEKKKDMWNSMLES-----VASGKRLP-EKNLLVLGGTVETQRSFLETLSSDF 67 Query: 75 NKFFDREE-HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD----NAEQLLEVPMRT 129 + D + AL ++ + + + + + L SL + LL+ + Sbjct: 68 RRTLDTDHIPPVANHFALGNTYYDVLDADQEDILARI-TLYSLTKPSASFSSLLKPLLTP 126 Query: 130 HGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRT--VERV 187 + V+++LD S P + L LR ++ ++ E ++ +E+ Sbjct: 127 QTIPNTLVVILLDWSHPWLWMRQLRDWILLLRT----VLVSLSIEAKDAMEEVMIGWRDR 182 Query: 188 GQQNKDSEK------------------------------LDPLPFPVIIVGGKYDVFSGF 217 G+ + D L P+ +V D Sbjct: 183 GRGGASTNLDGSGVATAAMASDGGAGSDSVALPLGPGEWEDALGLPLSVVCQNADKIDSL 242 Query: 218 DP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHP 269 + + +R++ G +L++ S +P L LG S P Sbjct: 243 EKRQGWKEEQFDVVMQFMRTVLLKHGASLIYTSTSVPSQLPSL--IHSSLGITSLLKRQP 300 Query: 270 FRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDP 328 + +V+D ++ + + DSW KI VE + + +++ Q + D Sbjct: 301 LKHNVIDRDK-IVVPPNWDSWGKIRVLRDGFDVEMVSEGWSIDLDQPFPRESARTLNGDG 359 Query: 329 AKDPG-FKELVIDEIRSQKNEE 349 + G F + D+ Q ++ Sbjct: 360 LNEAGEFSDSESDDGARQSEDD 381 >gi|119584836|gb|EAW64432.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_b [Homo sapiens] Length = 224 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 65/195 (33%), Gaps = 35/195 (17%) Query: 138 ILMLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE------- 180 +L++D+S+P L+ +R+ ++ +K+ + +E +E Sbjct: 1 MLVVDMSKPWTALDSLQKWASVVREHVDKLKIPPEEMKQMEQKLIRDFQEYVEPGEDFPA 60 Query: 181 --QRTVERVGQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPII------RKH 224 QR + DS L PV++V K D S + Sbjct: 61 SPQRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDF 120 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 +R G AL++ S K K ++ I +G VV + + I Sbjct: 121 IQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIP 178 Query: 285 FGTDSWSKIGDTGAQ 299 G D+ KIG Sbjct: 179 AGWDNDKKIGILHEN 193 >gi|116194005|ref|XP_001222815.1| hypothetical protein CHGG_06720 [Chaetomium globosum CBS 148.51] gi|88182633|gb|EAQ90101.1| hypothetical protein CHGG_06720 [Chaetomium globosum CBS 148.51] Length = 539 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 116/358 (32%), Gaps = 49/358 (13%) Query: 19 VKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKT----TA- 73 + G + + + + P E+ I++LG + T Sbjct: 12 TTASVGSGTDSKNGDKAEKKELWNSMLSSVASGRRLP-EKNIILLGGTVDSQREFFETLA 70 Query: 74 ---INKFFDREE---HATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSLDN-AEQLLE 124 + + DR + AL Y++ + + + + + + L S LL Sbjct: 71 NNDLRRTLDRNASRMPPVANSFALGYTYYDVLDADQEDTLARISLYTLTSPSAAFASLLR 130 Query: 125 VPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTV 184 + + ++++LD S+P ++ L LR + ++ E + + Sbjct: 131 PLLTPQSIPNTLIVVLLDWSEPWKWMRQLREWILLLRTVLVSLSDEC-EETMKEVMLAWR 189 Query: 185 ER-------------VGQQNKDSEK-------LDPLPFPVIIVGGKYDVFSGFDP----- 219 +R V + + + D L P+ +V + + Sbjct: 190 DRGRGGVTNLDGTAAVPTADGEMDLPVGPGEWTDELGLPLCVVCQNAEKMEYLEKTQSWK 249 Query: 220 -IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPFRSHVVD 276 + LR+ G +L++ + +P L LG S P + +V+D Sbjct: 250 EEEFDVVLQFLRTTLLRHGASLIYTTPSVPSQLPTL--IHSSLGIHSLLKKQPLKHNVID 307 Query: 277 FNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 ++ + I DSW KI V+ + + +++ Q Q + + +D Sbjct: 308 RDK-VVIPPNWDSWGKIRVLRDGFDVDLVSNGWSIDLDQPFPRPQS-NGSENGIEDGN 363 >gi|46135805|ref|XP_389594.1| hypothetical protein FG09418.1 [Gibberella zeae PH-1] Length = 512 Score = 154 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 63/376 (16%), Positives = 130/376 (34%), Gaps = 65/376 (17%) Query: 12 QRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK----- 66 R+ + +D+ + E P E+ ++VLG Sbjct: 3 NRVSVYTTGSGDSEGRDGEQKKDLWTSMLES-----VASGKRLP-EKNLIVLGGSPEHQR 56 Query: 67 ---CVGKTTAINKFFDREEHAT-RPTLALEYSFGRRIGSGKSPQVMNV--WELGSL-DNA 119 ++ + DR + AL Y++ + + + + V + L Sbjct: 57 DFLESLSSSEPRRNADRLKIPPIANNFALGYTYYDVLDADQDDTLARVSLYFLSQASTEF 116 Query: 120 EQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ-------MMEKVT 172 L+ + + ++I++LD SQP + + + +++ ++ +ME+V Sbjct: 117 ASLVAPLLTPETIPNTSLIILLDWSQPHLWLRQIWTWVQVIQEVLKKVDTDQHALMEEVM 176 Query: 173 PELREILEQRTVERV---------GQQNKDSEKL------DPLPFPVIIVGGKYDVFSGF 217 +E + G S L +PL P+ +V F Sbjct: 177 SAWKERGRGGAATNLDGTPSATATGSDGDSSLPLGPGEWEEPLGLPLCVVCQNAWKEPDF 236 Query: 218 DPIIRKHTCRCLRSMAHLIGGALLFYSQ-KMPKLAKVLRDT--ICHLGFGSPAHPFRSHV 274 D + LR++ G +L++ SQ +L ++ T I L HP + +V Sbjct: 237 D-----TVLQYLRTVLLRHGASLIYTSQNAPSQLPSLIHSTLGITSLL---KRHPLKHNV 288 Query: 275 VDFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEV--PQLQ-LEKQKLKETTDPAK 330 +D ++ + + DSW KI G E++ ++ ++ P+ + D Sbjct: 289 IDRDK-IVVPTNWDSWGKIRVLGGTFDAEQVSNSWSEDISTPRESMRFNDDDQGEVD--- 344 Query: 331 DPGFKELVIDEIRSQK 346 E ++E R QK Sbjct: 345 -----EAELEE-REQK 354 >gi|119174895|ref|XP_001239770.1| hypothetical protein CIMG_09391 [Coccidioides immitis RS] gi|90298556|gb|EAS28187.1| hypothetical protein CIMG_09391 [Coccidioides immitis RS] Length = 239 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 92/278 (33%), Gaps = 50/278 (17%) Query: 11 HQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILV----LGSK 66 +Q+LQ++ + + S S D G ++ + P + ++++ +G Sbjct: 3 YQQLQQVP-QSSSRPGSGLSSGGDRYGY-SQSHSEQTSRPQSGPPSKNSVVIKVGMVGDA 60 Query: 67 CVGKTTAINKFFDRE-EHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEV 125 +GKT+ + K+ + + TL + + + ++W+LG +L + Sbjct: 61 QIGKTSLMVKYVEGSWDEDYIQTLGVNFMEKTISIR-NTEITFSIWDLGGQREFVNMLPL 119 Query: 126 PMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVE 185 +A++ M DL++ ++ Y+ R + Sbjct: 120 VCND----AVAILFMFDLTRKSTL-NSIKEWYRQGRGFNK-------------------- 154 Query: 186 RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQ 245 P+ +VG KYD F F ++ + A + +L+F S Sbjct: 155 --------------TAIPL-LVGTKYDHFVNFPREDQEEISIQAKRFAKAMRASLIFSST 199 Query: 246 KMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCI 283 + + + F + EPL + Sbjct: 200 SHSINVQKIFKIVLSKAFDLKCTIPEIENI--GEPLLL 235 >gi|67536988|ref|XP_662268.1| hypothetical protein AN4664.2 [Aspergillus nidulans FGSC A4] gi|40741516|gb|EAA60706.1| hypothetical protein AN4664.2 [Aspergillus nidulans FGSC A4] Length = 522 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 56/378 (14%), Positives = 123/378 (32%), Gaps = 80/378 (21%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG---------------------- 64 S+T S +D + P E+ +L+LG Sbjct: 7 SSTVSSKDGLKKNIWSSMLDSAATGKRLP-EKNLLILGATALLSFGSSLTPPCLGGTPES 65 Query: 65 --------SKCVGKTTAIN--KFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WE 112 S ++ N + + AL Y++ + + + + V + Sbjct: 66 QREFLEAYSADTLDSSLSNEKRKGKGKVPPVANQFALGYTYLDVLDADQEDTLARVSAYL 125 Query: 113 LGSLD-NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA---QQMM 168 L + LL+ + + + +V+++LD S P + LR+ + ++ Sbjct: 126 LSEPSLSFAPLLKPLLTPQSIPETSVVILLDWSDPWT-------WVRRLREWVRLLRHVL 178 Query: 169 EKVTPELREILEQRT-VERVGQQNKDSEKL------------------DPLPFPVIIVGG 209 + E + ++E+ R ++ D+ + L P+ +V Sbjct: 179 VSLDDETKVVMEENMTQWRERKKGIDTSSTGSQATSSGSAIIGPGEWDEGLGVPLCVVCQ 238 Query: 210 KYDVFSGFD------PIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 D + + +R++ G +L++ + LG Sbjct: 239 GTDKMEKLERDHGWSEDEFDFIHQFMRTLLVKHGASLIYTKPFHANNLHSV--LHSSLGI 296 Query: 264 GS--PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA-QSVERIGATFGMEVPQLQLEKQ 320 S +++ ++ ++ + I DSW+KI ++E I + +E+ Q E Sbjct: 297 HSLLKKLSLKANFIERDK-ILIPTNWDSWAKIRVIREGSNLEGISTAWSIEI-QDPPEP- 353 Query: 321 KLKETTDPAKDPGFKELV 338 L + D A+D G E Sbjct: 354 -LSDRNDEAQDDGSSEED 370 >gi|158290784|ref|XP_312349.4| AGAP002589-PA [Anopheles gambiae str. PEST] gi|157018063|gb|EAA07717.5| AGAP002589-PA [Anopheles gambiae str. PEST] Length = 239 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 29/219 (13%) Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA--- 164 +++W L + LL+ + ++L L ++ P + L+ K L + Sbjct: 22 LSIWTLAADPELNGLLKFALNERSFPHTLILLTLSMAAPWNWMDQLQYWMKVLDNHIGGL 81 Query: 165 -------QQMMEKVTPELREILE-----------QRTVERVGQQNKDSEKLDPLPFPVII 206 Q M ++ + + + +R+ E V +D+ L VI+ Sbjct: 82 EIDAELKHQCMARLMAKWQSYSDLGSDPLRNSPCKRSNELVPLPLEDAVLTSNLGMEVIV 141 Query: 207 VGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICH 260 V + D + + + +R G +L++ + K +L + H Sbjct: 142 VVKRSDQMATLRRELNYREEHFDFMQQAIRRAGLQYGASLVYTTVKNNINCDLLLQYLKH 201 Query: 261 LGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 +G P S V + + + G DS KI Sbjct: 202 RIYGLPFGT--SASVVEKDAVFVPAGWDSVQKISILYES 238 >gi|157863075|gb|ABV90642.1| cytoplasmic dynein light intermediate chain [Tetrahymena thermophila] Length = 457 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 50/349 (14%), Positives = 119/349 (34%), Gaps = 61/349 (17%) Query: 31 SIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD---------RE 81 S ++ + + L + + + +LVLG++ GK T I+ + R Sbjct: 2 SSKEPSKKENLWNNILNETGQKNKFQNKQVLVLGTRGTGKRTLIDSLHEISQTIYPKIRS 61 Query: 82 EHATRPTL-------ALEYSFGRRIG-SGKSPQV---MNVWELGSLDNAEQLLEVPMRTH 130 L AL+Y + + + + + QLL + ++ + Sbjct: 62 NEMQSGKLRIAGSVSALDYVYLNVKNLDDQDEDTMAKLGFYIIDEETQ-SQLLPIVLKQN 120 Query: 131 GLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ 190 ++ + +MLDLS+P F L+ + + + Q + + E + + + + Sbjct: 121 TVKDTLITIMLDLSEPWTFMEQLDKWIEMITNHLQSLQ--INLETLDQMRAKVEKLFRDY 178 Query: 191 NKDS----------------------------------EKLDPLPFPVIIVGGKYDVFSG 216 + L P++I+ K D+ + Sbjct: 179 KEPVLDSDGKLVKSDTQISPEEEAELIKLKSSVPLPEGSLTSNLGIPIVILANKSDLIAQ 238 Query: 217 FDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP-AHPFRSHVV 275 + + LR G +L+F S K + ++ + + H +G + + + Sbjct: 239 SNDQQSQIVLYYLRKYCLQYGASLVFTSSKNQESLEIYYEYMLHTLYGFKNKNKSEIYTI 298 Query: 276 DFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 D + I G+D+ + + + + E+ + E+ + K + +E Sbjct: 299 D---SIFIPSGSDNLNLLKQSNSTIFEQCDSKPYEELVKRPTSKNQRQE 344 >gi|58258773|ref|XP_566799.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57222936|gb|AAW40980.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 588 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 46/286 (16%), Positives = 85/286 (29%), Gaps = 65/286 (22%) Query: 89 LALEYSFGRRIGS--GKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LAL Y +P + + S + +L+ + L AV+++LD ++P Sbjct: 89 LALGYEVIDAGEEYSDSAPPISVFYPPSSHPSLLKLVPSALPPKSLADTAVMIVLDWTKP 148 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDS------------ 194 +L + A + E L +R + + S Sbjct: 149 SSMLQELLNWLSWVEAWA---LGSAEKGEIEELHERLQSYLQHYTEPSATNTGVTAYSGL 205 Query: 195 ----------EKLDPLPFPVIIVGGKYDVFSGFDPIIR----------KHTCRCLRSMAH 234 L+ P+I+V K D+ I + LR++ Sbjct: 206 GPLLPLGAGTLTLNSSGIPIIVVCTKADLMDNVAEEIGIKGGRWEERTDWVQQVLRTICL 265 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSP--AHPFRSHVVDF--------------- 277 G AL + + P +L+ + H + P P + + D Sbjct: 266 SYGAALFYTAPTRPTTYSLLKSYLLHRLYTVPPSLSPAPTSLTDPSHIAPSPAQGVSTRY 325 Query: 278 ----------NEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEV 312 + + + G DSW KI ERI + + + Sbjct: 326 PFAHRANVLDRDAVMVPSGWDSWGKINVLREGFEPERIHKAWTVSL 371 >gi|154285758|ref|XP_001543674.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150407315|gb|EDN02856.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 511 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 101/284 (35%), Gaps = 36/284 (12%) Query: 80 REEHATRPTLALEYSFGRRIGSGKSPQVMNVWE-LGSLDN--AEQLLEVPMRTHGLQQLA 136 AL Y++ + + + + V L S + LL+ + + + Sbjct: 47 GRVPPIANQFALGYTYHDVLDADQEDILARVSIYLLSEPSSSFAPLLKPLLTPKTVPETL 106 Query: 137 VILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTPELREILEQR------T 183 ++++LD P + L+ + LR D + +ME+V E R+ Sbjct: 107 IVILLDWENPWTWVRQLQEWIRLLRSVLISLDDETKVVMEEVMTEWRDHKRGGDPASSAG 166 Query: 184 VERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRS 231 + L P L P+ +V D + + +R+ Sbjct: 167 GGMTTSGGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKLEKEHGWHEEEFDFILQFMRT 226 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTI-CHLGFGS--PAHPFRSHVVDFNEPLCIWFGTD 288 + G +L++ + P LA L+ I LG S + +V+D ++ + I D Sbjct: 227 ILLKHGASLIYTT---PFLANSLQSLIHSSLGIHSLLKRQSLKHNVIDRDK-ILIPSNWD 282 Query: 289 SWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPAKD 331 SW KI +E +G + +E+ + + + ET +D Sbjct: 283 SWGKIRIIREGFDIEGVGTGWSIEIQDKPKQFRGVSETDGDNQD 326 >gi|119183788|ref|XP_001242885.1| hypothetical protein CIMG_06781 [Coccidioides immitis RS] gi|90301671|gb|EAS31302.1| hypothetical protein CIMG_06781 [Coccidioides immitis RS] Length = 531 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 60/358 (16%), Positives = 126/358 (35%), Gaps = 50/358 (13%) Query: 19 VKRTEGGES---ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG----------- 64 + ++ G ++ + P+ +D + P E+T+LVLG Sbjct: 11 LSQSSGTKNGPGSRPTSKDG-KKNLWSSMLDGVASGKRLP-EKTLLVLGGTPESQREFLD 68 Query: 65 --SKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE-LGSLDN--A 119 S ++ + AL Y++ + + + + V L S + Sbjct: 69 TLSSDPSDPRLPSEKKKGKAPPIANQFALGYTYRDVLDADQEDILSRVSIYLLSEPSPAF 128 Query: 120 EQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL 179 LL+ + +++ ++++LD P + L + LR + + + EI+ Sbjct: 129 APLLKPLLNPKSVRETLIVILLDWESPWLWVRQLREWIRLLRSVLFSLDDDTKLVMEEIM 188 Query: 180 EQRTVERVGQQN--------KDSEKLDP------LPFPVIIVGGKYDVFSGFDP------ 219 + +R G + S L P L P+ +V + + Sbjct: 189 MEWKGQRRGTDSTYPAGSSAPVSIPLGPGEWDEGLGIPMCVVCQGAEKIEKLEKDHGWRE 248 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI-CHLGFGS--PAHPFRSHVVD 276 + +R++ G +L++ + P LA L+ I LG S F+ +V+D Sbjct: 249 EEFDFILQFMRTILLKHGSSLIYTT---PFLANSLQSLIHSSLGIHSLLKRQSFKHNVID 305 Query: 277 FNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 ++ + + DSW KI +E +G + +E+ Q +P + G Sbjct: 306 RDK-ILVPSNWDSWGKIRIIREGFDMEGVGTAWSIEI-QESAGSGDEPAEREPNPEDG 361 >gi|149050523|gb|EDM02696.1| dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 134 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 12/131 (9%) Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--A 298 +F S+ L K +R I L FG +S VD N+PL I G DS +IG Sbjct: 1 MFTSKSEALLLK-MRGVINQLAFGIDKS--KSMCVDQNKPLFITAGLDSLCQIGSPPVPD 57 Query: 299 QSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELA 351 + ++ A ME+ + EK LK DPA+DP + E +DE+R QK++EL Sbjct: 58 SDIGKLQAHSPMELWKKVYEKLFPPKSTSTLKAIQDPARDPQYAESEVDEMRVQKDQELE 117 Query: 352 GLMRDVLLRGK 362 R K Sbjct: 118 QYKRSSSKTWK 128 >gi|159106574|gb|EDP45457.1| hypothetical protein MGL_0446 [Malassezia globosa CBS 7966] Length = 436 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 57/298 (19%), Positives = 100/298 (33%), Gaps = 44/298 (14%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE---HATRPTLA 90 DI G L R R + +TI+VLG GK+ + + ++ + T Sbjct: 4 DIWGDLLR-GARARHAFVS-----KTIVVLGEPSSGKSILVRQLVGSDQARASGPKETSG 57 Query: 91 -LEYSFGRRIGSGKSPQVMN--VWELGS-LDNAEQLLEVPMRT-------------HGLQ 133 L + F + K+ + + V+ + S + L H ++ Sbjct: 58 PLGFGFIELSENDKTDESLRTSVYTVHSFGSSIAATLPYAFPPVQTAPDASAMGALHRMR 117 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--- 190 + +++LD S+P F L ++ LR+ QQ + E + Sbjct: 118 ETIFLIILDWSKPWTFAAQLVAWFRLLRELIQQAYVAGQEHSADTERATMRENLETHLFS 177 Query: 191 NKDS-----EKLDPLPFPVIIVGGKYDVFSGFDPIIR------KHTCRCLRSMAHLIGGA 239 N D D L + +V K D R + LR++A G A Sbjct: 178 NADDVRPPGMLTDNLGVHIALVCTKADCLDSAIKERRLSDSQIDSLQQFLRTVAMCYGAA 237 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP----LCIWFGTDSWSKI 293 + + LR + H + + + V+ + L + G DSWSKI Sbjct: 238 IFSTTITRASSYDALRAHVRHTLYPDTSEANGTSTVEASTADTRHLLVPAGWDSWSKI 295 >gi|146164455|ref|XP_001013126.2| Ras family protein [Tetrahymena thermophila SB210] gi|146145792|gb|EAR92881.2| Ras family protein [Tetrahymena thermophila SB210] Length = 681 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 115/353 (32%), Gaps = 73/353 (20%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD---------R 80 ++ + L + + + +LVLG++ GK T I+ + R Sbjct: 10 ENLWN---------NILNETGQKNKFQNKQVLVLGTRGTGKRTLIDSLHEISQTIYPKIR 60 Query: 81 EEHATRPTL-------ALEYSFGRRIG-SGKSPQV---MNVWELGSLDNAEQLLEVPMRT 129 L AL+Y + + + + + QLL + ++ Sbjct: 61 SNEMQSGKLRIAGSVSALDYVYLNVKNLDDQDEDTMAKLGFYIIDEETQ-SQLLPIVLKQ 119 Query: 130 HGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQ 189 + ++ + +MLDLS+P F L+ + + + Q + + E + + + + Sbjct: 120 NTVKDTLITIMLDLSEPWTFMEQLDKWIEMITNHLQSLQ--INLETLDQMRAKVEKLFRD 177 Query: 190 QNKDSEKLDP---------------------LPFPV----------------IIVGGKYD 212 + D P+ + K D Sbjct: 178 YKEPVLDSDGKLVKSDTQISPEEEAELIKLKSSVPLPEGSLTSNLVYKETYRFLNQIKSD 237 Query: 213 VFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP-AHPFR 271 + + + + LR G +L+F S K + ++ + + H +G + Sbjct: 238 LIAQSNDQQSQIVLYYLRKYCLQYGASLVFTSSKNQESLEIYYEYMLHTLYGFKNKNKSE 297 Query: 272 SHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 + +D + I G+D+ + + + + E+ + E+ + K + +E Sbjct: 298 IYTID---SIFIPSGSDNLNLLKQSNSTIFEQCDSKPYEELVKRPTSKNQRQE 347 Score = 70.2 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 12/118 (10%), Positives = 47/118 (39%), Gaps = 7/118 (5%) Query: 66 KCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLE 124 K VGK+ + ++ T+ +E+ + + + +W+ ++ +++ Sbjct: 475 KGVGKSCMLIRYSKNDFVTDYNATIGVEFQSKIVKIND-ASVKLQIWDTAGQESFRSIVK 533 Query: 125 VPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQR 182 + + + V+L+ +++ + F ++ ++ +++ V + E+ Sbjct: 534 SFYK----KTVGVLLVYNIANKESF-QSIKHWLTEAKENSEESAIFVLVGAQSDREKD 586 >gi|82594415|ref|XP_725415.1| dynein light intermediate chain 2, cytosolic [Plasmodium yoelii yoelii str. 17XNL] gi|23480414|gb|EAA16980.1| dynein light intermediate chain 2, cytosolic [Plasmodium yoelii yoelii] Length = 694 Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 117/358 (32%), Gaps = 64/358 (17%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAI----------- 74 ++ I+D + ++ + ++ + I++LG+K VGK++ + Sbjct: 223 KNGEEGIKDEQSSVYKKILKKLNIDKNEQVESSHIIILGNKDVGKSSLLKALQKIALEND 282 Query: 75 ---NKFFDREEHATRPTLALEYSFGRRIGSGKSPQV------MNVWELGSLDNAEQLLEV 125 R E P +Y ++ +VW L L++ Sbjct: 283 GEYLDLLYRSEIRVLP---FDYGCLNIKNFEDDKKIHDTQGNSHVWILQHPFYTSLLIKN 339 Query: 126 PMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE----LREILE- 180 + ++++ +++ DL +P +++ + +++ + L++ LE Sbjct: 340 LKKIQNIKKIIILICTDLYKPYNIISEINTWVDVMHKIYEELYSNYDIDIVSGLKDELEK 399 Query: 181 -------------------------QRTVERVGQQNKDSEKL-DPLPFPVIIVGGKYDVF 214 ++ ++ V + + + L FP+I V K D + Sbjct: 400 YIYNYKQGKNCEKKENREIDVYSGLEQNIDNVKNEENQKKLIKINLSFPIIFVICKSDGY 459 Query: 215 SGFDPIIR----KHTCRCLRSMAHLIGGALLF--YSQKMP-KLAKVLRDTICHLGFGSPA 267 + LR++A GA++F K ++L I H + P Sbjct: 460 EILNNRTYQGYIDVIISYLRNLAISYQGAIIFCNTINKNELINIELLYKYIMHRLYDFPF 519 Query: 268 HPFRSHVVDFNEPLCIWFGTDSWSKIG-DTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 + ++D E + I G D I V + + + K + E Sbjct: 520 --KENEILDCYEKIFIPSGYDDEKLINKSIKNTFVGNFNKPYDSIIIKPMTNKTIVAE 575 >gi|70935784|ref|XP_738930.1| hypothetical protein PC000669.03.0 [Plasmodium chabaudi chabaudi] gi|56515533|emb|CAH80037.1| conserved hypothetical protein [Plasmodium chabaudi] Length = 373 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 43/370 (11%), Positives = 106/370 (28%), Gaps = 73/370 (19%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKF----FDRE 81 + I+ + + + ++ + I++LG+K VGK++ + + + Sbjct: 5 SNDEEGIRHEKSSIYKSILKKLNIDKNDEVENSHIIILGNKDVGKSSLLKSLQKISLEGD 64 Query: 82 EHA----TRPTL---ALEYSFGRRIGSGKSPQV------MNVWELGSLDNAEQLLEVPMR 128 + + +Y + ++ +VW L L++ Sbjct: 65 GEYTDLLYKNEIRVLPFDYGCLNIKNFEDNKKIHDIQGNSHVWILQHPCYTSLLIKNLKN 124 Query: 129 THGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERV- 187 ++++ +++ DL +P +++ + + + E+ L+ + Sbjct: 125 FKNIKKIIILICTDLYKPYNIISEINSWIDVMHKIFEDLYSDYDMEVVGELKNNLETYIY 184 Query: 188 ---------------------------------------------GQQNKDSEKLDPLPF 202 ++ + L F Sbjct: 185 NYKGVEKNGKTGTKEEQHVTNGVGTHSDFESNKEGSIDSVNNVRKEKEGRAKLVKINLSF 244 Query: 203 PVIIVGGKYDVFSGFDPIIR----KHTCRCLRSMAHLIGGALLF--YSQKMP-KLAKVLR 255 P++ V K D + + LR++A A+LF K ++L Sbjct: 245 PIVFVICKSDGYEILNNRTYQGYIDVIISYLRNLAISYQAAILFCNTINKNELINVELLY 304 Query: 256 DTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG-DTGAQSVERIGATFGMEVPQ 314 + H + P ++D E + I G D I V + + + Sbjct: 305 RYMMHRLYDFPF--KEKEILDCYEKIFIPSGYDDEELINKSIKNTFVGNFNKPYDSIIIK 362 Query: 315 LQLEKQKLKE 324 K + E Sbjct: 363 PMTNKTIVAE 372 >gi|85089469|ref|XP_957965.1| hypothetical protein [Neurospora crassa OR74A] Length = 531 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 103/343 (30%), Gaps = 77/343 (22%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK--------CVGKTTAINKFF 78 + +++ + + A P E+ IL+LG + + Sbjct: 22 NGEKEKKELWSSMLDS-----VASAKRLP-EKNILLLGGSVDSQREFFESLSRNELRRNT 75 Query: 79 DR---EEHATRPTLALEYSFGRRIGSGKSPQVMNVWE---LGSLDNAEQLLEVPMRTHGL 132 DR + + AL Y++ + + + + + L++ + + Sbjct: 76 DRQGSRKPPIANSFALGYTYYDVLDADQEDTLARISLYTLTDPSPAFASLIQPLITPQSI 135 Query: 133 QQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK 192 ++++LD SQP ++ L LR Q++ + + E + ER Sbjct: 136 PNTLIVILLDWSQPWKWMRQLREWILLLRTVFQKLNRECS-ATMEEVMTVWRERGRGGGL 194 Query: 193 DSEKL----------------------DPLPFPVIIVGGKYDVFSGFDP------IIRKH 224 + + D L P+ +V + + Sbjct: 195 NLDGTSAVPTTSADADVSLPVGPGEWEDALGMPLCVVCQNAEKMDHLEKTQGWKEEEFDV 254 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPFRSHVVDFNEPLC 282 + LR++ L LG S P + +V+D ++ + Sbjct: 255 VLQFLRTI---------------------LLRLHSSLGIHSLLKKQPLKHNVIDRDK-IL 292 Query: 283 IWFGTDSWSKIGDTGAQ-SVERIGATFGMEV---PQLQLEKQK 321 + DSW KI VE + + + ++ Q ++ Sbjct: 293 VPPNWDSWGKIRVLREGFDVEAVSSGWTADLSIPWPRQPQRVA 335 >gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 446 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 50/167 (29%), Gaps = 16/167 (9%) Query: 181 QRTVERVGQQNKDSE--------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTC 226 QR + DS L PV++V K D S + Sbjct: 132 QRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQ 191 Query: 227 RCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFG 286 +R G AL++ S K K ++ I +G VV + + I G Sbjct: 192 SHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAG 249 Query: 287 TDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPG 333 D+ KIG ++ ++ + E A+D Sbjct: 250 WDNDKKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQ 296 Score = 80.6 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 7/77 (9%) Query: 29 TPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 Q++ L+E R R + P + +L+LG GKT+ I K E + Sbjct: 42 DEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLIRKI-QGIEEYKKG 96 Query: 88 TLALEYSFGRRIGSGKS 104 LEY + + Sbjct: 97 R-GLEYLYLNVHDEDRD 112 >gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene family [Xenopus tropicalis] gi|134023906|gb|AAI35942.1| Rab31 protein [Xenopus tropicalis] Length = 194 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 68/208 (32%), Gaps = 46/208 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ +++F D +H PT+ + SG +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVSRFVQDHFDHNISPTIGASFMTKTVP-SGNELHKFLIWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F L+ K L++ Sbjct: 63 GQERFHSLAPMYYR----GSAAAVIVYDITKQDTF-HTLKKWVKELKEH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ R+ T + R A Sbjct: 107 -----------------------GPENIVMAIAGNKCDL-----SDTREVTMKDAREYAE 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLG 262 IG ++ S K + L I Sbjct: 139 SIGAIVVETSAKNAINVEELFQGISRRI 166 >gi|15236081|ref|NP_195699.1| AtRABH1c (Arabidopsis Rab GTPase homolog H1c); GTP binding [Arabidopsis thaliana] gi|13272477|gb|AAK17177.1|AF325109_1 small GTP-binding protein-like [Arabidopsis thaliana] gi|14423430|gb|AAK62397.1|AF386952_1 small GTP-binding protein-like [Arabidopsis thaliana] gi|4490740|emb|CAB38902.1| small GTP-binding protein-like [Arabidopsis thaliana] gi|7271044|emb|CAB80652.1| small GTP-binding protein-like [Arabidopsis thaliana] gi|23197670|gb|AAN15362.1| small GTP-binding protein-like [Arabidopsis thaliana] Length = 214 Score = 127 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 76/228 (33%), Gaps = 46/228 (20%) Query: 51 ATTTPKER-TILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVM 108 A+ +P + ++ LG + VGKT+ I +F +D+ + +PT+ +++ ++ + Sbjct: 2 ASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRT-VRL 60 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + L+ +R + I++ D+S Q F + R+ Q Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSV----AIVVYDVSNRQTFLNTSKWIEDVHRERGQ--- 113 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 +++VG K D+ R+ + Sbjct: 114 -------------------------------SNVIIVLVGNKTDLV-----EKRQVSISE 137 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 G + S K K L I G ++ + D Sbjct: 138 GEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLATKSDD 185 >gi|154303178|ref|XP_001551997.1| hypothetical protein BC1G_09609 [Botryotinia fuckeliana B05.10] gi|150855072|gb|EDN30264.1| hypothetical protein BC1G_09609 [Botryotinia fuckeliana B05.10] Length = 517 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 52/354 (14%), Positives = 119/354 (33%), Gaps = 69/354 (19%) Query: 23 EGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAI-------N 75 + +D+ + + P E+ ILVLG + + Sbjct: 12 ATTSTDDEEKKDMWSSMLD-----GVASGKRLP-EKNILVLGGTADSQKEFLEALSVDET 65 Query: 76 KFFDREEHATRP----TLALEYSFGRRIGSGKSPQVMNV--WELGSL-DNAEQLLEVPMR 128 + + + +P AL Y++ + + + + + L + L++ + Sbjct: 66 RKSQDRQSSKQPPIANNFALGYTYHDVLDADHEDILARLSLYLLADPSPSFTPLMQPLLT 125 Query: 129 THGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA---QQMMEKVTPELREILEQRTVE 185 + ++++LD SQP K LRD + ++ + + +E +E+ + Sbjct: 126 PQTIPNTLIVILLDWSQPW-------FWLKELRDWIRLLRPLLISLDEDCKEKMEEVMIS 178 Query: 186 ---------------RVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDPI---- 220 + S L P L P+ + D + Sbjct: 179 WRDRGRGGSTLDGGGSTATEGDVSLPLGPGEWEEALGLPLCV----SDKIETLEKERSWR 234 Query: 221 --IRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI-CHLGFGS--PAHPFRSHVV 275 + + LR++ G +L++ + P + L+ I LG S P R +++ Sbjct: 235 EDEFDYVLQFLRTILLKHGASLIYTT---PGVISPLQGLIHSSLGIHSLLKRQPIRHNLI 291 Query: 276 DFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDP 328 D ++ + + DSW KI +VE + + +++ + + + P Sbjct: 292 DRDK-VVVPPNWDSWGKIRVLREGFNVEEVNKGWSLDIEEDTSSDESSTHSQPP 344 >gi|156097140|ref|XP_001614603.1| hypothetical protein PVX_098765 [Plasmodium vivax Salvador I] gi|148803477|gb|EDL44876.1| hypothetical protein, conserved [Plasmodium vivax] Length = 822 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 56/389 (14%), Positives = 121/389 (31%), Gaps = 92/389 (23%) Query: 38 RLAEEQQRLRQLEATTTPKERT-------ILVLGSKCVGKTTAINKF----FDREEHATR 86 A E++ + Q E+ I++LG+K VGK++ + +++ Sbjct: 301 DEAHEKKSIYQNILKKLNMEKNEELESSHIIILGNKDVGKSSLVKSLQEISLQGDKNDGE 360 Query: 87 -------PTLALEYSFGRRIG------SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQ 133 L L+Y+ + + +VW L L++ + ++ Sbjct: 361 VLYQNGGGVLPLDYACLGVKNLEENKKANEVKGSSHVWILQHSSYVGSLIKNLKKFKDIK 420 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGL----------------RDTAQQMMEKVTPELRE 177 ++ +++ DL +P +++ L R+ + + V R+ Sbjct: 421 KVIILICTDLYKPYNIMSEINQWIDVLYVIFEHLHSDYSMEELRELKESLQSYVHNYKRD 480 Query: 178 ILEQRTVERVGQQN------------------------------------------KDSE 195 LE++ E+ Q +D Sbjct: 481 ALERKKREKKCQVGVNPRNGITVGDSQPLMGESSREGQVKLSSSSSIREENTSNVERDGL 540 Query: 196 KLDPLPFPVIIVGGKYDVFSGFDPIIR----KHTCRCLRSMAHLIGGALLFYSQ---KMP 248 + FP++ V K D + + LR++A A +F + K Sbjct: 541 IKINMSFPILFVICKSDGYEILNNRTYQGYMDVIIAYLRNLAVNYQAATIFCNTANKKEA 600 Query: 249 KLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS-VERIGAT 307 K K+L I H P ++D E + + G D I + + V+ Sbjct: 601 KNVKLLYRYIMHRLHNFPFSDN--AILDDYERVFVPSGYDDEGLIKQSIENTFVQNFNKP 658 Query: 308 FGMEVPQLQLEKQKLKETTDPAKDPGFKE 336 + + + K ++ + + D F + Sbjct: 659 YDSIIVKPITNKSIVEHSHNVVADNYFND 687 >gi|124783774|gb|ABN14940.1| dynein light chain-A variant [Taenia asiatica] Length = 277 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 18/172 (10%) Query: 181 QRTVERVGQQNKDSE--KLDPLPFPVIIVGGKYDVFSGFD------PIIRKHTCRCLRSM 232 ++TV V ++ + ++ L P+++V K DV + +R Sbjct: 5 KKTVSDVLKELPITPGALINNLGIPLVVVVTKTDVMDDMERKQGMSEEQYDLIQMHIRRF 64 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 G AL++ S K K +L++ + H +GSP ++V+D + + I G DS +K Sbjct: 65 CLSYGAALVYVSAKNGKNCGLLKNYLQHRIYGSPFTQN-AYVIDKDS-VFIPAGWDSLNK 122 Query: 293 IGDTGAQSVE--RIGATFGMEVPQLQLEKQKLKETTDP---AKDPGFKELVI 339 IG Q++ R G F VP+ ++Q +P A D + I Sbjct: 123 IGLL-EQNLTKYRPGDDFDKVVPK--PQEQATTANREPAVTAADDQYFLSEI 171 >gi|26341846|dbj|BAC34585.1| unnamed protein product [Mus musculus] Length = 195 Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 5 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-WGNELHKFLIWDTA 63 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F L+ K L++ Sbjct: 64 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSF-HTLKKWVKELKEH----------- 107 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 108 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 139 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 140 SIGAIVVETSAKNAINIEELFQGIS 164 >gi|118086786|ref|XP_428301.2| PREDICTED: similar to RAB31, member RAS oncogene family [Gallus gallus] Length = 195 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 46/210 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 3 EIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWD 61 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + L + R A +++ D+++ F L+ K L++ Sbjct: 62 TAGQERFHSLAPMYYR----GSAAAVIVYDITKQDSF-HTLKKWVKELKEH--------- 107 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 P + I G K D+ IR+ + + Sbjct: 108 -------------------------GPENIVMAIAGNKCDL-----SDIREVPMKDAKEY 137 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 A IG ++ S K + L I Sbjct: 138 AESIGAIVVETSAKNAVNIEELFQGISQQI 167 >gi|146075496|ref|XP_001462715.1| small GTP binding protein rab6-like protein [Leishmania infantum JPCM5] gi|134066794|emb|CAM65254.1| small GTP binding protein rab6-like protein [Leishmania infantum] Length = 274 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 62/149 (41%), Gaps = 11/149 (7%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQ 106 ++++ ++ +++LG + VGKT+ I +F +D + +PT+ +++ Sbjct: 15 VSASSSSMQKHKLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLEDDRDV 74 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR----- 161 +++W+ + L+ +R A +++ D++ F++ + +R Sbjct: 75 RLHLWDTAGQERFHSLIPSYIRN----SAATVVVYDITSRPTFFSAFK-WIDEVRSESGD 129 Query: 162 DTAQQMMEKVTPELREILEQRTVERVGQQ 190 D ++ + E E E + + Sbjct: 130 DVVIMLVGNKVDQASERREVSAEEAMKKA 158 >gi|71745978|ref|XP_822225.1| small GTP binding protein rab6-like protein [Leishmania major] gi|70799857|gb|AAZ10035.1| small GTP binding protein rab6-like protein [Leishmania major] Length = 274 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 60/147 (40%), Gaps = 11/147 (7%) Query: 56 KERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 + +++LG + VGKT+ I +F +D + +PT+ +++ +++W+ Sbjct: 23 PKHKLVLLGDQSVGKTSIITRFMYDTFDQQYQPTIGIDFFSKTVHLDDDRDVRLHLWDTA 82 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-----DTAQQMME 169 + L+ +R A +++ D++ F++ + +R D ++ Sbjct: 83 GQERFHSLIPSYIRN----SAATVVVYDITSRPTFFSAFK-WIDEVRSESGADVVIMLVG 137 Query: 170 KVTPELREILEQRTVERVGQQNKDSEK 196 + E E E + + ++ S Sbjct: 138 NKVDQASERREVSAEEAMKKASECSVL 164 >gi|156552282|ref|XP_001602002.1| PREDICTED: similar to low-Mr GTP-binding protein Rab31, putative [Nasonia vitripennis] Length = 186 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 64/190 (33%), Gaps = 46/190 (24%) Query: 57 ERTILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 E +++LGS+ VGKT+ IN++ + H PT+ + F +I VW+ Sbjct: 5 EGKVVLLGSQGVGKTSLINRYINNAFNHQNNPTIGASF-FTCKINLEDVRIKFQVWDTAG 63 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + + + R A L+ D++Q F T ++ L+ ++ Sbjct: 64 QERFRSMAPMYYRNAN----AAFLVFDITQYNSF-TAIKSWVTELQRNVEE--------- 109 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 P +I+VG K D+ RK R A Sbjct: 110 -------------------------PMVLILVGNKVDL-----SEKRKVDSEECRKYAES 139 Query: 236 IGGALLFYSQ 245 IG S Sbjct: 140 IGATYHEISA 149 >gi|19526850|ref|NP_598446.1| Rab31-like [Mus musculus] gi|62901101|sp|Q921E2|RAB31_MOUSE Ras-related protein Rab-31 gi|15341792|gb|AAH13063.1| RAB31, member RAS oncogene family [Mus musculus] Length = 194 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F L+ K L++ Sbjct: 63 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSF-HTLKKWVKELKEH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 107 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 139 SIGAIVVETSAKNAINIEELFQGIS 163 >gi|74140181|dbj|BAE33804.1| unnamed protein product [Mus musculus] gi|74186712|dbj|BAE34811.1| unnamed protein product [Mus musculus] gi|112293003|dbj|BAF02879.1| Rab22B [Mus musculus] Length = 195 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 5 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 63 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F L+ K L++ Sbjct: 64 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSF-HTLKKWVKELKEH----------- 107 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 108 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 139 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 140 SIGAIVVETSAKNAINIEELFQGIS 164 >gi|62900806|sp|Q6GQP4|RAB31_RAT Ras-related protein Rab-31 (GTP-binding protein Rab0) Length = 194 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F L+ K L++ Sbjct: 63 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSF-HTLKKWVKELKEH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 107 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 139 SIGALVVETSAKNAINIEELFQGIS 163 >gi|77404176|ref|NP_659562.2| RAB31, member RAS oncogene family [Rattus norvegicus] gi|49119014|gb|AAH72698.1| RAB31, member RAS oncogene family [Rattus norvegicus] Length = 195 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 5 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 63 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F L+ K L++ Sbjct: 64 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSF-HTLKKWVKELKEH----------- 107 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 108 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 139 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 140 SIGALVVETSAKNAINIEELFQGIS 164 >gi|73962207|ref|XP_850610.1| PREDICTED: similar to Ras-related protein Rab-31 (Rab-22B) [Canis familiaris] Length = 194 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F L+ K L++ Sbjct: 63 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSF-HTLKKWVKELKEH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 107 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 139 SIGAVVVETSAKNAINIEELFQGIS 163 >gi|116004109|ref|NP_001070412.1| RAB31, member RAS oncogene family [Bos taurus] gi|115305074|gb|AAI23832.1| RAB31, member RAS oncogene family [Bos taurus] Length = 195 Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 5 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 63 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F L+ K L++ Sbjct: 64 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSF-HTLKKWVKELKEH----------- 107 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 108 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 139 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 140 SIGAVVVETSAKNAINIEELFQGIS 164 >gi|114672239|ref|XP_523865.2| PREDICTED: RAB31, member RAS oncogene family isoform 2 [Pan troglodytes] gi|2500069|sp|Q13636|RAB31_HUMAN Ras-related protein Rab-31 (Rab-22B) gi|10179679|gb|AAG13847.1|AF234995_1 small GTPase RAB22B [Homo sapiens] gi|20379090|gb|AAM21105.1|AF498957_1 small GTP binding protein RAB31 [Homo sapiens] gi|1388195|gb|AAB02832.1| low-Mr GTP-binding protein Rab31 [Homo sapiens] gi|47115255|emb|CAG28587.1| RAB31 [Homo sapiens] gi|54696916|gb|AAV38830.1| RAB31, member RAS oncogene family [Homo sapiens] gi|54696918|gb|AAV38831.1| RAB31, member RAS oncogene family [Homo sapiens] gi|60818832|gb|AAX36478.1| RAB31 member RAS oncogene family [synthetic construct] gi|61356180|gb|AAX41217.1| RAB31 member RAS oncogene family [synthetic construct] gi|61356190|gb|AAX41218.1| RAB31 member RAS oncogene family [synthetic construct] gi|61363035|gb|AAX42323.1| RAB31 member RAS oncogene family [synthetic construct] Length = 194 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F+ L+ K L++ Sbjct: 63 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSFY-TLKKWVKELKEH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 107 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 139 SIGAIVVETSAKNAINIEELFQGIS 163 >gi|88192998|pdb|2FG5|A Chain A, Crystal Structure Of Human Rab31 In Complex With A Gtp Analogue Length = 192 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 22 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 80 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F+ L+ K L++ Sbjct: 81 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSFY-TLKKWVKELKEH----------- 124 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 125 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 156 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 157 SIGAIVVETSAKNAINIEELFQGIS 181 >gi|33589861|ref|NP_006859.2| RAB31, member RAS oncogene family [Homo sapiens] gi|9963781|gb|AAG09690.1|AF183421_1 small GTP-binding protein rab22b [Homo sapiens] gi|12654623|gb|AAH01148.1| RAB31, member RAS oncogene family [Homo sapiens] gi|60655513|gb|AAX32320.1| RAB31 member RAS oncogene family [synthetic construct] gi|119622001|gb|EAX01596.1| RAB31, member RAS oncogene family, isoform CRA_b [Homo sapiens] gi|123984139|gb|ABM83504.1| RAB31, member RAS oncogene family [synthetic construct] gi|123998237|gb|ABM86720.1| RAB31, member RAS oncogene family [synthetic construct] Length = 195 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 5 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 63 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F+ L+ K L++ Sbjct: 64 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSFY-TLKKWVKELKEH----------- 107 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 108 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 139 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 140 SIGAIVVETSAKNAINIEELFQGIS 164 >gi|1457954|gb|AAC50773.1| Rab22b Length = 194 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F+ L+ K L++ Sbjct: 63 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSFY-TLKKWVKELKEH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 107 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 139 SIGAIVVETSAKNAINIEELFQGIS 163 >gi|54696912|gb|AAV38828.1| RAB31, member RAS oncogene family [synthetic construct] gi|54696914|gb|AAV38829.1| RAB31, member RAS oncogene family [synthetic construct] gi|60830380|gb|AAX36926.1| RAB31 member RAS oncogene family [synthetic construct] gi|61366036|gb|AAX42804.1| RAB31 member RAS oncogene family [synthetic construct] gi|61366043|gb|AAX42805.1| RAB31 member RAS oncogene family [synthetic construct] Length = 195 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F+ L+ K L++ Sbjct: 63 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSFY-TLKKWVKELKEH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 107 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 139 SIGAIVVETSAKNAINIEELFQGIS 163 >gi|60654153|gb|AAX29769.1| RAB31 member RAS oncogene family [synthetic construct] Length = 195 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F+ L+ K L++ Sbjct: 63 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSFY-TLKKWVKELKEH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 107 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 139 SIGAIVVETSAKNAINIEELFQGIS 163 >gi|61372802|gb|AAX43915.1| RAB31 member RAS oncogene family [synthetic construct] Length = 196 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 5 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 63 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F+ L+ K L++ Sbjct: 64 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSFY-TLKKWVKELKEH----------- 107 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 108 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 139 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 140 SIGAIVVETSAKNAINIEELFQGIS 164 >gi|62898742|dbj|BAD97225.1| RAB31, member RAS oncogene family variant [Homo sapiens] Length = 195 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 5 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 63 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F+ L+ K L++ Sbjct: 64 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSFY-TLKKWVKELKEH----------- 107 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 108 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 139 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 140 SIGAIVVETSAKNAINIEELFQGIS 164 >gi|109121541|ref|XP_001096759.1| PREDICTED: similar to RAB31, member RAS oncogene family [Macaca mulatta] Length = 194 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 5 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 63 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F+ L+ K L++ Sbjct: 64 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSFY-TLKKWVKELKEH----------- 107 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 108 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 139 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 140 SIGAIVVETSAKNAINIEELFQGIS 164 >gi|149720951|ref|XP_001489577.1| PREDICTED: similar to low-Mr GTP-binding protein Rab31 [Equus caballus] Length = 194 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F+ L+ K L++ Sbjct: 63 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSFY-TLKKWVKELKEH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 107 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 139 SIGAIVVETSAKNAINIEELFQGIS 163 >gi|157754295|ref|XP_001669491.1| Hypothetical protein CBG00431 [Caenorhabditis briggsae] gi|39585223|emb|CAE57466.1| Hypothetical protein CBG00431 [Caenorhabditis briggsae] Length = 391 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 40/243 (16%), Positives = 81/243 (33%), Gaps = 46/243 (18%) Query: 8 HSLHQRLQKMFVKRTEGGESATPSIQDIAGRL--AEEQQRLRQLEATTTPKER--TILVL 63 H+++ + K + R E P + +A L +++ R+ E T +R ++ + Sbjct: 145 HAINNTMIKKPLYRPIQPEPTIPKVSSLAEELNAIDKKVPQRKEEEELTQPDRIFKVVFV 204 Query: 64 GSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQL 122 G VGKT +++F +R + T+ ++++ + M +W+ + + Sbjct: 205 GDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIAPNRAIAMQLWDTAGQERFRSI 264 Query: 123 LEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQR 182 + R V+LM D++ Q F +R+ + V Sbjct: 265 TKQYFRKAD----GVVLMFDVTSEQSFLN--------VRNWIDSVRAGVDEATV------ 306 Query: 183 TVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLF 242 + +VG K D+F I R R +A Sbjct: 307 ---------------------MCLVGNKVDLFGS--DIARSGVYRAAEKLALEFKIPFYE 343 Query: 243 YSQ 245 S Sbjct: 344 TSA 346 >gi|119622000|gb|EAX01595.1| RAB31, member RAS oncogene family, isoform CRA_a [Homo sapiens] Length = 172 Score = 121 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 5 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 63 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F+ L+ K L++ Sbjct: 64 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSFY-TLKKWVKELKEH----------- 107 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 108 -----------------------GPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 139 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 140 SIGAIVVETSAKNAINIEELFQGIS 164 >gi|71651576|ref|XP_814463.1| small GTP-binding protein RAB6 [Trypanosoma cruzi strain CL Brener] gi|70879437|gb|EAN92612.1| small GTP-binding protein RAB6, putative [Trypanosoma cruzi] Length = 268 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 65/200 (32%), Gaps = 46/200 (23%) Query: 57 ERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 + I++LG + VGKT+ + +F +D + + T+ +++ ++ ++VW+ Sbjct: 34 KHKIVLLGDQSVGKTSLVTRFMYDTFDQQYQATIGIDFFSKTIPVDNRT-VRLHVWDTAG 92 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ +R I++ D++ F + +R Sbjct: 93 QERFRSLIPSYIRNSS----GTIVVYDITSRASFLGTFK-WIDEVRA------------- 134 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 + DS + +VG K D R + + A Sbjct: 135 --------------ERGDS-------VVIFLVGNKLDA-----QEKRVVSTEEAQKKAEE 168 Query: 236 IGGALLFYSQKMPKLAKVLR 255 + S K K K L Sbjct: 169 YNLVFMEVSAKQGKNVKALF 188 >gi|7689359|gb|AAF67746.1|AF254800_1 GTP-binding protein Rab0 [Rattus norvegicus] Length = 194 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 46/205 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + G +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVP-CGNELHKFLIWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F L+ K L++ Sbjct: 63 GQERFHSLAPMYYR----GSAAAVIVYDITKQDSF-HTLKKWVKELKE------------ 105 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + I G K D+ IR+ + + A Sbjct: 106 ----------------------YGPENIVMAIAGNKCDL-----SDIREVPLKDAKEYAE 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTIC 259 IG ++ S K + L I Sbjct: 139 SIGALVVETSAKNAINIEELFQGIS 163 >gi|123234717|emb|CAM17123.1| RAB12, member RAS oncogene family [Mus musculus] Length = 291 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 85/238 (35%), Gaps = 52/238 (21%) Query: 20 KRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF- 78 +R GG S+ ++ L+ Q R R+ + ++++GS+ VGKT+ + +F Sbjct: 57 RRPAGG-----SLGAVSPALSGGQARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTD 111 Query: 79 DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 D A + T+ +++ G + +W+ + + R+ +I Sbjct: 112 DTFCEACKSTVGVDFKIKTVELRG-KKIRLQIWDTAGQERFNSITSAYYRS----AKGII 166 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLD 198 L+ D+++ + F + K + +M++K E E Sbjct: 167 LVYDITKKETF----DDLPKWM-----KMIDKYASEDAE--------------------- 196 Query: 199 PLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI-GGALLFYSQKMPKLAKVLR 255 +++VG K D + R+ + + A I G S K + Sbjct: 197 -----LLLVGNKLDCETD-----REISRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 244 >gi|156371538|ref|XP_001628820.1| predicted protein [Nematostella vectensis] gi|156215806|gb|EDO36757.1| predicted protein [Nematostella vectensis] Length = 241 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 38/249 (15%), Positives = 76/249 (30%), Gaps = 45/249 (18%) Query: 45 RLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGK 103 L+ +LV+G VGKT+ I ++ + + T+ ++++ K Sbjct: 4 ELQDEMGEVKEHLYKVLVIGEYGVGKTSIIRRYTEGYFSPNYKLTIGVDFALKIIHWDEK 63 Query: 104 SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDT 163 + + +W++ + + V + +A I++ DLS+ F + K RD Sbjct: 64 TKINLQLWDVAGHERFGHMTRVYYK----YAIAAIIVFDLSRSATF----DAILKWYRDV 115 Query: 164 AQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRK 223 Q++M + P PVII+ K D+ + Sbjct: 116 NQKVM---------------------------LTNENPIPVIILANKCDLEDYPVDEEK- 147 Query: 224 HTCRCLRSMAHLIG-GALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD--FNEP 280 L G S K + + + + D P Sbjct: 148 -----LDQFCQNNGFAGWFATSAKEDYNIDDAMRFLVQAILSTSGECRKPSLQDSRCTSP 202 Query: 281 LCIWFGTDS 289 + + S Sbjct: 203 INVLAENGS 211 >gi|76162568|gb|AAX30491.2| SJCHGC04029 protein [Schistosoma japonicum] Length = 180 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 6/139 (4%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 + + L EE A T +T++VLG GKTT I + E + Sbjct: 14 EEKKHLWSSLLEEVT---HKAAVTLSPSKTLVVLGDDECGKTTLIAR-LQGTEDPKKG-F 68 Query: 90 ALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 LEY + Q +NVW L LL+ + +++ + + +P Sbjct: 69 GLEYCLLDIKDEDRDDQTKLNVWILDGNTVHSHLLKFAINEESFGDCFIMICVSMMEPWN 128 Query: 149 FWTDLECAYKGLRDTAQQM 167 +L L++ + Sbjct: 129 IINNLNKWVGILKEHIDGL 147 >gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 10895] gi|44986287|gb|AAS54747.1| AGR257Cp [Ashbya gossypii ATCC 10895] Length = 220 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 72/218 (33%), Gaps = 46/218 (21%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSP 105 T + I+ LG + VGKT+ I +F +D + + T+ +++ ++ Sbjct: 2 NVNRTNKTLSKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTVYLDDRT- 60 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + L+ +R + I++ D++ + F E K + D Sbjct: 61 IRLQLWDTAGQERFRSLIPSYIRDSHV----AIVVYDITNKKSF----EYIDKWVED--- 109 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 V + + + + IVG K D+ RK T Sbjct: 110 ---------------------VRNERGEENLI------LCIVGNKSDLV-----DERKVT 137 Query: 226 CRCLRSMAHLIGGALL-FYSQKMPKLAKVLRDTICHLG 262 + A L+ + S K L I L Sbjct: 138 VEEGENKAKLLNAKIFVETSTKAGFNVGALFKRIAKLL 175 >gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum] Length = 228 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 72/224 (32%), Gaps = 46/224 (20%) Query: 59 TILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGK+ +++F D + ++ T+ +E++ GK +W+ + Sbjct: 29 KVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKV-IKAQIWDTAGQE 87 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 + R + +++ D+ + Q F +L LRD A++ Sbjct: 88 RYRAITSAYYR----GAVGALVVYDVCKLQSF-HNLTSWLNELRDHAEK----------- 131 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIG 237 +++VG K D+ +R R A G Sbjct: 132 -----------------------NIVMMLVGNKCDLRH-----LRNVGTEDARFFAQQQG 163 Query: 238 GALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPL 281 + + S + I + + + +D L Sbjct: 164 LSFIETSALDSTNVEEAFCQILQDIYSIVSSHPPVNNIDMKMSL 207 >gi|68066998|ref|XP_675470.1| hypothetical protein PB000846.00.0 [Plasmodium berghei strain ANKA] gi|56494675|emb|CAH94781.1| conserved hypothetical protein [Plasmodium berghei] Length = 399 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 85/288 (29%), Gaps = 54/288 (18%) Query: 89 LALEYSFGRRIGSGKSPQV------MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLD 142 L +Y + G + ++ +VW L L++ ++++ +++ D Sbjct: 6 LPFDYGYLNVKDFGDNKKIHDTQGNSHVWILQHSCYTSLLIKNLKNFPNIKKIIILICTD 65 Query: 143 LSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR-------------------------- 176 L +P +D+ + + + + Sbjct: 66 LYKPYNIISDINSWIDVMHKIYEDLYSDYDMNIVSGLKDELETYIYNYKHGKDSEKKENR 125 Query: 177 -----------EILEQRTVERVGQQNKDSEKL-DPLPFPVIIVGGKYDVFSGFDPIIR-- 222 E ++ ++ V + + + L FP+I V K D + + Sbjct: 126 ETDRIDAYLDFEKNQEGNIDNVKNEENRKKLIKINLSFPIIFVICKSDGYEILNNRTYQG 185 Query: 223 --KHTCRCLRSMAHLIGGALLF--YSQKMP-KLAKVLRDTICHLGFGSPAHPFRSHVVDF 277 LR++A A++F K ++L + H + +++ Sbjct: 186 YIDVIISYLRNLAISYQAAIIFCNTINKNELINVELLYKYMMHRLYNFTF--KEKEILNC 243 Query: 278 NEPLCIWFGTDSWSKIG-DTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 E + I G D I VE + + + K + E Sbjct: 244 YEKIFIPSGYDDEKLINKSIKNTFVENFNKPYDSIIIKPITNKTIVAE 291 >gi|158597036|gb|EDP35273.1| dynein 2 light intermediate chain, putative [Brugia malayi] Length = 140 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 10/126 (7%) Query: 247 MPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQSVERI 304 M L R I + FG+ A ++ D N+PL + G DS IG S+ I Sbjct: 1 MENLISKTRVLISSVVFGTTAS--KTICTDHNKPLSVPCGADSLMDIGAPPFINSSLSLI 58 Query: 305 GATFGMEVPQL-----QLEKQKLKETTD-PAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 GAT ++ K+K E D PA+D KE IDE+ Q+ EL +R Sbjct: 59 GATNPRDLWYEAYLEHFPNKEKHNEREDNPAEDGQHKEPEIDELIEQRTRELEQYIRHKK 118 Query: 359 LRGKFE 364 R E Sbjct: 119 DRAALE 124 >gi|26252194|gb|AAH40558.1| DYNC2LI1 protein [Homo sapiens] Length = 144 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 6/124 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDE-PPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQ----QLAVILMLD 142 TLALEY++GRR + + + WELG + L+ +P+ L+ + + ++ Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRSWQLSSLLPVSMN 120 Query: 143 LSQP 146 L+ P Sbjct: 121 LTTP 124 >gi|84043470|ref|XP_951525.1| small GTP-binding protein [Trypanosoma brucei TREU927] gi|33348344|gb|AAQ15670.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei] gi|62358719|gb|AAX79175.1| small GTP-binding protein RAB6, putative [Trypanosoma brucei] Length = 230 Score = 117 bits (295), Expect = 8e-25, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 68/200 (34%), Gaps = 46/200 (23%) Query: 57 ERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 + I++LG + VGKT+ I +F +D + + T+ +++ + ++ ++VW+ Sbjct: 27 KHKIVLLGDQAVGKTSLITRFMYDTFDQQYQATIGIDFFSKTLHINNRA-TRLHVWDTAG 85 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ +R A +++ D++ F + + Sbjct: 86 QERFRSLIPSYIRN----SAATVVVYDITSRSSFLSTF--------------------KW 121 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 + + + V + +VG K DV R+ + + A Sbjct: 122 IDEVRAARGDDVI---------------IALVGNKCDV-----QEKREVSADEAQKRADE 161 Query: 236 IGGALLFYSQKMPKLAKVLR 255 + S K K L Sbjct: 162 NRLIFVEVSAKTGTNVKSLF 181 >gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ustilago maydis 521] gi|46101753|gb|EAK86986.1| hypothetical protein UM06104.1 [Ustilago maydis 521] Length = 219 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 70/213 (32%), Gaps = 46/213 (21%) Query: 56 KERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 ++ ++ LG + VGKT+ I +F +D ++ + T+ +++ ++ + +W+ Sbjct: 2 RKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTA 60 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L+ +R + +++ D++ F K + D Sbjct: 61 GQERFRSLIPSYIRDSSV----AVVVYDITNRASFQNTS----KWVDDV----------- 101 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 ++ D +++VG K D+ R+ T A Sbjct: 102 ------------RAERGND--------VIIVLVGNKTDL-----SDKRQVTTEEAEKKAQ 136 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA 267 + S K KVL I G Sbjct: 137 EFNVMFIETSAKAGHNVKVLFKKIAQALPGMDK 169 >gi|78057535|gb|ABB17267.1| secretion related GTPase C [Aspergillus niger] Length = 210 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 46/215 (21%) Query: 52 TTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNV 110 + K+ ++ LG + VGKT+ I +F +D ++ + T+ +++ ++ + + Sbjct: 11 SNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQL 69 Query: 111 WELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEK 170 W+ + L+ +R + +++ D+S + F + +R Sbjct: 70 WDTAGQERFRSLIPSYIRDSSV----AVVVYDISNAKSFQNTRK-WIDDVR--------- 115 Query: 171 VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLR 230 G++ D +++VG K D+ R+ T Sbjct: 116 -----------------GERGND--------VIIVLVGNKTDL-----NDKREVTTAQGE 145 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 A G + S K+ K L I G Sbjct: 146 EEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGM 180 >gi|158186685|ref|NP_037149.1| RAB12, member RAS oncogene family [Rattus norvegicus] Length = 243 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 84/238 (35%), Gaps = 52/238 (21%) Query: 20 KRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF- 78 +R GG + ++ L+ Q R R+ + ++++GS+ VGKT+ + +F Sbjct: 9 RRPAGGG-----LGAVSPALSGGQARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTD 63 Query: 79 DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 D A + T+ +++ G + +W+ + + R+ +I Sbjct: 64 DTFCEACKSTVGVDFKIKTVELRG-KKIRLQIWDTAGQERFNSITSAYYRS----AKGII 118 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLD 198 L+ D+++ + F + K + +M++K E E Sbjct: 119 LVYDITKKETF----DDLPKWM-----KMIDKYASEDAE--------------------- 148 Query: 199 PLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI-GGALLFYSQKMPKLAKVLR 255 +++VG K D + R+ + + A I G S K + Sbjct: 149 -----LLLVGNKLDCETD-----REISRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 196 >gi|145251179|ref|XP_001397103.1| hypothetical protein An15g05740 [Aspergillus niger] gi|134082633|emb|CAK42527.1| unnamed protein product [Aspergillus niger] Length = 209 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 46/215 (21%) Query: 52 TTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNV 110 + K+ ++ LG + VGKT+ I +F +D ++ + T+ +++ ++ + + Sbjct: 11 SNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQL 69 Query: 111 WELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEK 170 W+ + L+ +R + +++ D+S + F + +R Sbjct: 70 WDTAGQERFRSLIPSYIRDSSV----AVVVYDISNAKSFQNTRK-WIDDVR--------- 115 Query: 171 VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLR 230 G++ D +++VG K D+ R+ T Sbjct: 116 -----------------GERGND--------VIIVLVGNKTDL-----NDKREVTTAQGE 145 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 A G + S K+ K L I G Sbjct: 146 EEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGM 180 >gi|71002422|ref|XP_755892.1| RAS small monomeric GTPase Rab6, putative [Aspergillus fumigatus Af293] gi|119481981|ref|XP_001261019.1| rab6 [Neosartorya fischeri NRRL 181] gi|66853530|gb|EAL93854.1| RAS small monomeric GTPase Rab6, putative [Aspergillus fumigatus Af293] gi|119409173|gb|EAW19122.1| rab6 [Neosartorya fischeri NRRL 181] Length = 207 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 76/225 (33%), Gaps = 46/225 (20%) Query: 52 TTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNV 110 + K+ ++ LG + VGKT+ I +F +D ++ + T+ +++ ++ + + Sbjct: 10 SNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQL 68 Query: 111 WELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEK 170 W+ + L+ +R + +++ D+S + F + +R Sbjct: 69 WDTAGQERFRSLIPSYIRDSSV----AVVVYDISNAKSFQNTRK-WIDDVR--------- 114 Query: 171 VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLR 230 G++ D +++VG K D+ R+ T Sbjct: 115 -----------------GERGND--------VIIVLVGNKTDL-----NDKREVTTAQGE 144 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVV 275 A G + S K+ K L I G R + Sbjct: 145 EEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGMEGEANRESQM 189 >gi|83770344|dbj|BAE60477.1| unnamed protein product [Aspergillus oryzae] Length = 209 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 46/215 (21%) Query: 52 TTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNV 110 + K+ ++ LG + VGKT+ I +F +D ++ + T+ +++ ++ + + Sbjct: 11 SNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQL 69 Query: 111 WELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEK 170 W+ + L+ +R + +++ D+S + F + +R Sbjct: 70 WDTAGQERFRSLIPSYIRDSSV----AVVVYDISNAKSFQNTRK-WIDDVR--------- 115 Query: 171 VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLR 230 G++ D +++VG K D+ R+ T Sbjct: 116 -----------------GERGND--------VIIVLVGNKTDL-----NDKREVTTAQGE 145 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 A G + S K+ K L I G Sbjct: 146 EEAKKNGLMFIETSAKVGHNVKQLFRRIAQALPGM 180 >gi|106507168|ref|NP_077768.2| RAB12, member RAS oncogene family [Mus musculus] gi|122065941|sp|P35283|RAB12_MOUSE Ras-related protein Rab-12 (Rab-13) gi|112292983|dbj|BAF02869.1| Rab12 [Mus musculus] gi|157170004|gb|AAI52767.1| RAB12, member RAS oncogene family [synthetic construct] Length = 243 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 85/238 (35%), Gaps = 52/238 (21%) Query: 20 KRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF- 78 +R GG S+ ++ L+ Q R R+ + ++++GS+ VGKT+ + +F Sbjct: 9 RRPAGG-----SLGAVSPALSGGQARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTD 63 Query: 79 DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 D A + T+ +++ G + +W+ + + R+ +I Sbjct: 64 DTFCEACKSTVGVDFKIKTVELRG-KKIRLQIWDTAGQERFNSITSAYYRS----AKGII 118 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLD 198 L+ D+++ + F + K + +M++K E E Sbjct: 119 LVYDITKKETF----DDLPKWM-----KMIDKYASEDAE--------------------- 148 Query: 199 PLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI-GGALLFYSQKMPKLAKVLR 255 +++VG K D + R+ + + A I G S K + Sbjct: 149 -----LLLVGNKLDCETD-----REISRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 196 >gi|145542895|ref|XP_001457134.1| hypothetical protein GSPATT00022910001 [Paramecium tetraurelia strain d4-2] gi|74833705|emb|CAI39329.1| rab_B54 [Paramecium tetraurelia] gi|124424949|emb|CAK89737.1| unnamed protein product [Paramecium tetraurelia] Length = 196 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 72/225 (32%), Gaps = 44/225 (19%) Query: 33 QDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLAL 91 DI + + + K+ +++LG K VGK++ ++F D+ + T+ Sbjct: 4 GDIQPKNQPKAGIKTKSNTPGQKKDIKVVMLGDKAVGKSSIASRFCFDKFQSEYEITIGG 63 Query: 92 EYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWT 151 Y+ G++ ++ ++W+ + LL + R A I++ D++Q F Sbjct: 64 VYNSVDLTVKGQNLKI-HLWDTAGEEKFRSLLSLYYRDAN----AAIIVYDITQSDSF-Q 117 Query: 152 DLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKY 211 + K L D Q+ + +VG K Sbjct: 118 SVSTWLKELEDKIQKD---------------------------------GMALALVGNKC 144 Query: 212 DVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRD 256 D RK A G S K + K L Sbjct: 145 DCLES----ERKVPKAKATDFAKQNGMIFYETSAKTGEGVKNLFQ 185 >gi|115312968|gb|AAI24015.1| Rab12 protein [Xenopus tropicalis] Length = 313 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 75/216 (34%), Gaps = 47/216 (21%) Query: 42 EQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIG 100 + R R+ + ++++GS+ VGKT+ + +F D A + T+ +++ Sbjct: 96 QAARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVEL 155 Query: 101 SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGL 160 G + +W+ + + R+ +IL+ D+++ + F E K + Sbjct: 156 RG-KKIRLQIWDTAGQERFNSITSAYYRS----AKGIILVYDITKKETF----EDLPKWM 206 Query: 161 RDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI 220 +M++K E E +++VG K D + Sbjct: 207 -----KMIDKYASEEAE--------------------------LLLVGNKLDCETD---- 231 Query: 221 IRKHTCRCLRSMAHLI-GGALLFYSQKMPKLAKVLR 255 R+ T + A I G S K + Sbjct: 232 -REITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 266 >gi|156542630|ref|XP_001604718.1| PREDICTED: similar to rab6 [Nasonia vitripennis] Length = 246 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 84/277 (30%), Gaps = 53/277 (19%) Query: 19 VKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKF- 77 + GGE + + + + + + ++ ++ LG + VGKT+ I +F Sbjct: 14 ARVAAGGEKSGATP--FRKKRVDVRTMSSSGDFGNPLRKFKLVFLGEQSVGKTSLITRFM 71 Query: 78 FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAV 137 +D ++ + T+ +++ ++ + +W+ + L+ +R Sbjct: 72 YDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQERFRSLIPSYIRD----STVA 126 Query: 138 ILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKL 197 +++ D++ F +R Sbjct: 127 VVVYDITNANSF-HQTSKWIDDVR----------------------------------TE 151 Query: 198 DPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDT 257 +++VG K D+ R+ + A + + S K K L Sbjct: 152 RGSDVIIMLVGNKTDL-----SDKRQVSTEEGERKAKELNVMFIETSAKAGYNVKQLFRR 206 Query: 258 ICHLGFGSPAHPFRS-----HVVDFNEPLCIWFGTDS 289 + G + + VV + P+ + S Sbjct: 207 VAAALPGMDSTENKPPEDMQEVVLKDTPIELNASESS 243 >gi|109091480|ref|XP_001087750.1| PREDICTED: similar to RAS-related protein RAB-22A [Macaca mulatta] Length = 501 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 69/216 (31%), Gaps = 46/216 (21%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 311 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 369 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 370 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELRQH----------- 413 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 414 -----------------------GPPNIVVAIAGNKCDLI-----DVREVMERDAKDYAD 445 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 I + S K L I + A+P Sbjct: 446 SIHAIFVETSAKNAININELFIEISRRIPSTDANPP 481 >gi|145357850|ref|NP_196588.3| AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding [Arabidopsis thaliana] gi|8953407|emb|CAB96682.1| GTP-binding protein [Arabidopsis thaliana] Length = 207 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 32/224 (14%), Positives = 74/224 (33%), Gaps = 48/224 (21%) Query: 51 ATTTPKER-TILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVM 108 A+ +P + ++ LG + VGKT+ I +F +D+ + + T+ +++ ++ + Sbjct: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRL 60 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + L+ +R + +++ D++ Q F + + +R Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSV----AVIVYDVANRQSFLNTSK-WIEDVR------- 108 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 +++VG K D+ R+ + Sbjct: 109 ---------------------------TERGSDVIIVLVGNKTDLV-----DKRQVSIEE 136 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS-PAHPFR 271 + A G + S K K L I G + Sbjct: 137 GDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180 >gi|116785433|gb|ABK23720.1| unknown [Picea sitchensis] Length = 207 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 74/224 (33%), Gaps = 48/224 (21%) Query: 51 ATTTPKER-TILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVM 108 AT +P + ++ LG + VGKT+ I +F +D+ ++ + T+ +++ ++ + Sbjct: 2 ATVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRL 60 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + L+ +R + +++ D++ Q F + +R Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSV----AVIVFDVANRQSFLNTAR-WIEEVR------- 108 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 +++VG K D+ R+ + Sbjct: 109 ---------------------------TERGSDVIIVLVGNKTDLV-----DKRQVSIEE 136 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS-PAHPFR 271 + A G + S K K L I G + Sbjct: 137 GDAKAREFGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180 >gi|82596931|ref|XP_726467.1| hypothetical protein PY00721 [Plasmodium yoelii yoelii str. 17XNL] gi|23481886|gb|EAA18032.1| Rab6 [Plasmodium yoelii yoelii] Length = 282 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 79/222 (35%), Gaps = 47/222 (21%) Query: 57 ERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 + ++ LG + VGKT+ I +F +D ++ + T+ +++ + P + +W+ Sbjct: 86 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYL-DEGPVRLQLWDTAG 144 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ +R A I++ D++ Q F E K + Sbjct: 145 QERFRSLIPSYIRD----SAAAIVVYDITNRQSF----ENTTKWI--------------- 181 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 ++IL +R + +++VG K D+ +RK T A Sbjct: 182 QDILNERGKD----------------VIIVLVGNKTDL-----ADLRKVTYEEGMQKAQE 220 Query: 236 IGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFR-SHVVD 276 S K KVL I + ++VVD Sbjct: 221 YNTMFHETSAKAGHNIKVLFKKIAAKLPNLENNNNHEANVVD 262 >gi|147225162|emb|CAN13146.1| RAB22A, member RAS oncogene family [Sus scrofa] Length = 194 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 68/216 (31%), Gaps = 46/216 (21%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDLI-----DVREVLERDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 I + S K L I + A P Sbjct: 139 SIHAIFVETSAKNAININELFIEISRRIPSTDASPP 174 >gi|68486004|ref|XP_713074.1| putative rab family GTP-binding protein [Candida albicans SC5314] gi|46434549|gb|EAK93955.1| likely rab family GTP-binding protein [Candida albicans SC5314] Length = 219 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 73/217 (33%), Gaps = 45/217 (20%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQ 106 + + K+ I+ LG + VGKT+ I +F +D + T+ +++ Sbjct: 2 SSDKSNLLKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTI 61 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 + +W+ + L+ +R + ++ D++ + F + K ++D Sbjct: 62 RLQLWDTAGQERFRSLIPSYIRDSHV----AVICYDITNKKSF----DNLDKWIKD---- 109 Query: 167 MMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC 226 V + D +++VG K D+ S R+ + Sbjct: 110 --------------------VKLERGDDVI-------IVLVGNKSDLASD----KRQVSL 138 Query: 227 RCLRSMAHLIGGALL-FYSQKMPKLAKVLRDTICHLG 262 + ++ IG S K K+L I Sbjct: 139 DDVENLQIKIGAKFFIETSTKANHNVKLLFKKIAQSL 175 >gi|113931342|ref|NP_001039118.1| RAB22A, member RAS oncogene family [Xenopus tropicalis] gi|89268938|emb|CAJ82023.1| RAB22A, member RAS oncogene family [Xenopus tropicalis] Length = 193 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 46/208 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSTAAIIVYDITKEETFL-TLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ + + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDL-----NDVREVLEKDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLG 262 I + S K L I Sbjct: 139 SINAVFVETSAKNAININELFIEISKRI 166 >gi|50978970|ref|NP_001003208.1| RAS-related protein RAB-22A [Canis lupus familiaris] gi|3256092|emb|CAA80473.1| Rab22a protein [Canis familiaris] Length = 194 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 46/208 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDLI-----DVREVMERDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLG 262 I + S K L I Sbjct: 139 SIHAIFVETSAKNAININELFIEISRRI 166 >gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago truncatula] Length = 220 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 29/235 (12%), Positives = 75/235 (31%), Gaps = 56/235 (23%) Query: 59 TILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGK+ +++F + ++ T+ +E++ G++ +W+ + Sbjct: 17 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT-VKAQIWDTAGQE 75 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + + +L+ D+++P F ++ K LRD A Sbjct: 76 RYR-----AITSAYYRGALGALLVYDVTKPTTF-DNVTRWLKELRDHADA---------- 119 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 ++++G K D+ +R +S A Sbjct: 120 ------------------------NIVIMLIGNKTDL-----KHLRAVATEDAQSYAEKE 150 Query: 237 GGALLFYSQKMPKLAKV--------LRDTICHLGFGSPAHPFRSHVVDFNEPLCI 283 G + + S + + I + P + + + + I Sbjct: 151 GLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTANEPAAAANIKEGKTIAI 205 >gi|109476659|ref|XP_001067187.1| PREDICTED: similar to RAS and EF hand domain containing [Rattus norvegicus] Length = 784 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 77/232 (33%), Gaps = 42/232 (18%) Query: 22 TEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DR 80 + G S S + L+ E + +T+ K I++ G VGK++ + + + Sbjct: 550 SAGEGSTVSSSRKTISALSPETDMVNNTLKSTSQKAYKIVLAGDAAVGKSSFLMRLCKNE 609 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILM 140 + T TL +++ + G P V+ +W+ + + + R V+L+ Sbjct: 610 FQGNTSATLGVDFQMKTLMVDG-EPTVLQLWDTAGQERFRSIAKSYFRKAD----GVLLL 664 Query: 141 LDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPL 200 D++ E ++ +R+ + + S Sbjct: 665 YDVT--------CEKSFLNVREWVAMVED--------------------GTHRS------ 690 Query: 201 PFPVIIVGGKYDVFSGFDPIIRKHTCRCL-RSMAHLIGGALLFYSQKMPKLA 251 P+++VG K D+ +K L +A G S K Sbjct: 691 -VPIMLVGNKADLRDAATAENQKCISSHLGEKLAMTYGALFCETSAKDGSNV 741 >gi|108706608|gb|ABF94403.1| Ras-related protein Rab-6A, putative, expressed [Oryza sativa (japonica cultivar-group)] Length = 215 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 48/225 (21%) Query: 57 ERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 + ++ LG + VGKT I +F +D+ + + T+ +++ ++ + +W+ Sbjct: 10 KYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 68 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ +R + +++ D++ Q F + + + Sbjct: 69 QERFRSLIPSYIRDSSV----AVIVYDVTDRQSFL-SISKWIEEV--------------- 108 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 +++VG K D+ R+ + + A Sbjct: 109 -------------------NTQRGGDVIIVLVGNKTDLV-----DKRQISTDEGEAKAQE 144 Query: 236 IGGALLFYSQKMPKLAKVLRDTICHLGFGSP--AHPFRSHVVDFN 278 G + S K K L I G + + +VD N Sbjct: 145 HGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSSAKQEDMVDIN 189 >gi|15227173|ref|NP_179816.1| AtRABH1d (Arabidopsis Rab GTPase homolog H1d); GTP binding [Arabidopsis thaliana] gi|4567198|gb|AAD23614.1| putative GTP-binding protein [Arabidopsis thaliana] Length = 207 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 73/210 (34%), Gaps = 47/210 (22%) Query: 51 ATTTPKER-TILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVM 108 A+ +P + ++ LG + VGKT+ I +F +D+ + + T+ +++ ++ + Sbjct: 2 ASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRT-VRL 60 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + L+ +R + +++ D++ F + + +R+ Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSV----AVVVYDVANRLSFLNTSK-WIEEVRN------ 109 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 +R + +++VG K D+ I + + Sbjct: 110 ------------ERAGD----------------VIIVLVGNKTDLVEKRQVSIEEGDSKG 141 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTI 258 G + S K K L I Sbjct: 142 -----REYGVMFIETSAKAGFNIKPLFRKI 166 >gi|72384491|gb|AAZ67607.1| 80A08_22 [Brassica rapa subsp. pekinensis] Length = 206 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 69/211 (32%), Gaps = 46/211 (21%) Query: 57 ERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 + ++ LG + VGKT+ I +F +D+ + + T+ +++ ++ + +W+ Sbjct: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYMEDRTL-RLQLWDTAG 67 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ +R + +++ D++ Q F + + +R Sbjct: 68 QERFRSLIPSYIRDSSV----AVIVYDVANRQSFLNTSK-WIEDVR-------------- 108 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 +++VG K D+ R+ + + A Sbjct: 109 --------------------TERGSDVIIVLVGNKTDLV-----DKRQVSIEEGDNKARD 143 Query: 236 IGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 G + S K K L I G Sbjct: 144 FGVIFIETSAKAGFNIKPLFRKISAALPGMD 174 >gi|147902647|ref|NP_001090471.1| RAB31, member RAS oncogene family [Xenopus laevis] gi|71682203|gb|AAI00187.1| Rab31 protein [Xenopus laevis] Length = 193 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 65/208 (31%), Gaps = 46/208 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVPHQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSTAAIIVYDITKEETF-STLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ + + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDL-----NDVREVLEKEAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLG 262 I + S K L I Sbjct: 139 SINAVFVETSAKNAININELFIEISKRI 166 >gi|30583895|gb|AAP36196.1| Homo sapiens RAB22A, member RAS oncogene family [synthetic construct] gi|61370724|gb|AAX43543.1| RAB22A member RAS oncogene family [synthetic construct] gi|61370733|gb|AAX43544.1| RAB22A member RAS oncogene family [synthetic construct] Length = 195 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 46/208 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDLI-----DVREVMERDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLG 262 I + S K L I Sbjct: 139 SIHAIFVETSAKNAININELFIEISRRI 166 >gi|10190714|ref|NP_065724.1| RAS-related protein RAB-22A [Homo sapiens] gi|13633614|sp|Q9UL26|RB22A_HUMAN Ras-related protein Rab-22A (Rab-22) gi|9961232|gb|AAF00047.2|AF091034_1 GTP-binding protein RAB22A [Homo sapiens] gi|11125136|emb|CAC15020.1| RAB22A, member RAS oncogene family [Homo sapiens] gi|16041684|gb|AAH15710.1| RAB22A, member RAS oncogene family [Homo sapiens] gi|30582931|gb|AAP35695.1| RAB22A, member RAS oncogene family [Homo sapiens] gi|39645547|gb|AAH63457.1| RAB22A, member RAS oncogene family [Homo sapiens] gi|61361041|gb|AAX41977.1| RAB22A member RAS oncogene family [synthetic construct] gi|119595902|gb|EAW75496.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|119595903|gb|EAW75497.1| RAB22A, member RAS oncogene family, isoform CRA_a [Homo sapiens] Length = 194 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 46/208 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDLI-----DVREVMERDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLG 262 I + S K L I Sbjct: 139 SIHAIFVETSAKNAININELFIEISRRI 166 >gi|123506780|ref|XP_001329276.1| Ras family protein [Trichomonas vaginalis G3] gi|62736244|gb|AAX97451.1| small Rab GTPase Rab6a [Trichomonas vaginalis] gi|121912229|gb|EAY17053.1| Ras family protein [Trichomonas vaginalis G3] Length = 202 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 73/243 (30%), Gaps = 55/243 (22%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA-TRPTLALEYSFGRRIGSGKSPQV 107 T+TP I+ +G VGKT+ IN++ T+ ++Y + P Sbjct: 2 KNITSTPF-HKIIFIGDSSVGKTSIINQYIYNSCTPQYNSTIGIDYLSK-IVNEADKPIQ 59 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 + +W+ + L+ +R+ +L+ D++ + ++ ++ Q + Sbjct: 60 LQIWDTAGQEKFHSLIPAYIRS----STIAVLVYDIT--------CKQSFDNIQTWYQMV 107 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 + P IIVG K D D Sbjct: 108 INNAEPAF-----------------------------IIVGNKSD----LDSERANSIEE 134 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 + A+ I + S + L D I + V + + I + Sbjct: 135 G-KKFANQINAKFIETSAITSENISQLFDIIIQI------PIPVEEVAQEEKQVMITIPS 187 Query: 288 DSW 290 D Sbjct: 188 DKM 190 >gi|89258433|gb|ABD65440.1| Rab21-like [Suberites domuncula] Length = 235 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 46/206 (22%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSG 102 L ++ E ++VLGS+ VGKT+ + + + + PT+ + +G Sbjct: 1 MSLLSPQSADNSLEAKVVVLGSQGVGKTSLVLRHVSNTFTQSVSPTIGASFFTFSMTVTG 60 Query: 103 KSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 + +W+ + + + R + A +++ D+++ + F E A + +R+ Sbjct: 61 -YRIKLQLWDTAGQERFRSMAPMYYR----RANAALIVYDITREKSF----EEAQEWVRE 111 Query: 163 TAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIR 222 ++ ++ + +VG K D+ R Sbjct: 112 LESKVDSNLS-------------------------------LCVVGNKCDL-----SGER 135 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMP 248 + + AH IG S Sbjct: 136 EVSREQGLEFAHQIGAMFTETSAAQN 161 >gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] Length = 215 Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 69/207 (33%), Gaps = 48/207 (23%) Query: 59 TILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGK+ +++F + ++ T+ +E++ G++ +W+ + Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT-VKAQIWDTAGQE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + + +L+ D+++P F ++ K LRD A Sbjct: 73 RYR-----AITSAYYRGALGALLVYDVTKPTTF-ENVSRWLKELRDHAD----------- 115 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 ++++G K D+ +R +S A Sbjct: 116 -----------------------SNIVIMLIGNKTDL-----KHLRAVATEDAQSYAEKE 147 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGF 263 G A + S + TI + Sbjct: 148 GLAFIETSALEATNVEKAFQTILSEIY 174 >gi|134024040|gb|AAI35229.1| Rab12 protein [Xenopus tropicalis] Length = 274 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 75/216 (34%), Gaps = 47/216 (21%) Query: 42 EQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIG 100 + R R+ + ++++GS+ VGKT+ + +F D A + T+ +++ Sbjct: 57 QAARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVEL 116 Query: 101 SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGL 160 G + +W+ + + R+ +IL+ D+++ + F E K + Sbjct: 117 RG-KKIRLQIWDTAGQERFNSITSAYYRS----AKGIILVYDITKKETF----EDLPKWM 167 Query: 161 RDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI 220 +M++K E E +++VG K D + Sbjct: 168 -----KMIDKYASEEAE--------------------------LLLVGNKLDCETD---- 192 Query: 221 IRKHTCRCLRSMAHLI-GGALLFYSQKMPKLAKVLR 255 R+ T + A I G S K + Sbjct: 193 -REITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 227 >gi|149734235|ref|XP_001490105.1| PREDICTED: similar to Rab22a protein [Equus caballus] Length = 272 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 81/270 (30%), Gaps = 46/270 (17%) Query: 2 RLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTIL 61 R P +++ L + ++ E+Q+ +E + Sbjct: 28 REPQRTSVVYEPLSDGAWSERPRPRVDARAGPGLSLLNLEQQRARASGSRAMALRELKVC 87 Query: 62 VLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 +LG VGK++ + +F D + PT+ + + + + +W+ + Sbjct: 88 LLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTAGQERFR 146 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 L + R A I++ D+++ + F + L+ K L Sbjct: 147 ALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELGQH----------------- 184 Query: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 P V I G K D+ +R+ R + A I Sbjct: 185 -----------------GPPNIVVAIAGNKCDLV-----DVREVMERDAKDYADSIHAIF 222 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 + S K L I + A+P Sbjct: 223 VETSAKNAININELFIEISRRIPSTDANPP 252 >gi|68485957|ref|XP_713097.1| putative rab family GTP-binding protein [Candida albicans SC5314] gi|46434574|gb|EAK93979.1| likely rab family GTP-binding protein [Candida albicans SC5314] Length = 224 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 73/217 (33%), Gaps = 45/217 (20%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQ 106 + + K+ I+ LG + VGKT+ I +F +D + T+ +++ Sbjct: 2 SSDKSNLLKKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLEEGKTI 61 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 + +W+ + L+ +R + ++ D++ + F + K ++D Sbjct: 62 RLQLWDTAGQERFRSLIPSYIRDSHV----AVICYDITNKKSF----DNLDKWIKD---- 109 Query: 167 MMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC 226 V + D +++VG K D+ S R+ + Sbjct: 110 --------------------VKLERGDDVI-------IVLVGNKSDLASD----KRQVSL 138 Query: 227 RCLRSMAHLIGGALL-FYSQKMPKLAKVLRDTICHLG 262 + ++ IG S K K+L I Sbjct: 139 DDVENLQIKIGAKFFIETSTKANHNVKLLFKKIAQSL 175 >gi|160704321|gb|EAT78701.2| hypothetical protein SNOG_14076 [Phaeosphaeria nodorum SN15] Length = 205 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 46/219 (21%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQ 106 Q + K+ ++ LG + VGKT+ I +F +D ++ + T+ +++ ++ Sbjct: 3 QSGYSNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-V 61 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 + +W+ + L+ +R + +++ D++ + F E K + D Sbjct: 62 RLQLWDTAGQERFRSLIPSYIRDSSV----AVVVYDITNKKTF----ENTRKWVDDV--- 110 Query: 167 MMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC 226 G++ D +++VG K D+ R+ T Sbjct: 111 --------------------RGERGND--------VIIVLVGNKTDL-----NDKREVTT 137 Query: 227 RCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 A + S K+ K L I G Sbjct: 138 AQGEEEAKKNNLMFIETSAKVGHNVKALFKRIAQALPGM 176 >gi|85002141|gb|ABC68472.1| Rab6A [Marsupenaeus japonicus] Length = 212 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 35/249 (14%), Positives = 78/249 (31%), Gaps = 54/249 (21%) Query: 56 KERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 ++ ++ LG + VGKT+ I +F +D ++ + T+ +++ ++ + +W+ Sbjct: 10 RKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTA 68 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L+ +R +++ D++ F +R Sbjct: 69 GQERFRSLIPSYIRD----STVAVVVYDITNANSF-HQTSKWIDDVR------------- 110 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 +++VG K D+ R+ + A Sbjct: 111 ---------------------TERGSDVIIVLVGNKTDL-----SDKRQVSTEEGERKAK 144 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW--SK 292 + + S K K L + G + + VD E + DS + Sbjct: 145 ELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTENKK--VDMTEVVL----RDSENAAD 198 Query: 293 IGDTGAQSV 301 IG T + Sbjct: 199 IGRTADGGM 207 >gi|18568105|gb|AAL75941.1|AF125104_1 RAB22 [Homo sapiens] Length = 194 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 46/208 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDLI-----DVREVMERDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLG 262 I + S K L I Sbjct: 139 SIHAIFVETSAKNAININELFIEISRRI 166 >gi|1710019|sp|P51154|RB22A_CANFA Ras-related protein Rab-22A (Rab-22) Length = 194 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 46/208 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 63 GQEAFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDLI-----DVREVMERDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLG 262 I + S K L I Sbjct: 139 SIHAIFVETSAKNAININELFIEISRRI 166 >gi|10636479|emb|CAC10538.1| GTP-binding protein RAB22A [Homo sapiens] Length = 194 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 46/208 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDLI-----DVREVMERDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLG 262 I + S K L I Sbjct: 139 SIHAIFVETSAKNAININELFIEISRRI 166 >gi|115472201|ref|NP_001059699.1| Os07g0496000 [Oryza sativa (japonica cultivar-group)] gi|24059912|dbj|BAC21376.1| GTP-binding protein Rab6 [Oryza sativa (japonica cultivar-group)] gi|113611235|dbj|BAF21613.1| Os07g0496000 [Oryza sativa (japonica cultivar-group)] Length = 208 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 29/203 (14%), Positives = 69/203 (33%), Gaps = 46/203 (22%) Query: 57 ERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 + ++ LG + VGKT+ I +F +D+ ++ + T+ +++ ++ + +W+ Sbjct: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ +R + +++ D++ Q F + + +R Sbjct: 68 QERFRSLIPSYIRDSSV----AVIVFDVASRQSFLNTSK-WIEEVR-------------- 108 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 +++VG K D+ R+ + A Sbjct: 109 --------------------TERGSDVIIVLVGNKTDLV-----DKRQVSIEEGEGKAKD 143 Query: 236 IGGALLFYSQKMPKLAKVLRDTI 258 +G + S K K L I Sbjct: 144 LGVMFIETSAKAGFNIKALFRKI 166 >gi|149030014|gb|EDL85106.1| RAB22A, member RAS oncogene family (predicted), isoform CRA_b [Rattus norvegicus] Length = 194 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 68/215 (31%), Gaps = 46/215 (21%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ + LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVRELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 107 -----------------------GPPSIVVAIAGNKCDL-----TDVREVMERDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 I + S K L I + A P Sbjct: 139 SIHAIFVETSAKNAININELFIEISRRLPSTDASP 173 >gi|126302779|ref|XP_001368849.1| PREDICTED: similar to RAB22A, member RAS oncogene family [Monodelphis domestica] Length = 194 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 69/218 (31%), Gaps = 46/218 (21%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDLI-----DVREVMERDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRS 272 I + S K L I + +P S Sbjct: 139 SIHAIFVETSAKNAININELFIEISRRIPSTDTNPSSS 176 >gi|56118785|ref|NP_991282.2| RAB22A, member RAS oncogene family [Danio rerio] gi|55250250|gb|AAH85393.1| RAB22A, member RAS oncogene family [Danio rerio] Length = 196 Score = 114 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 64/208 (30%), Gaps = 46/208 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEESF-QTLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ R+ + + + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDL-----SDAREVSEKDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLG 262 I + S K + I Sbjct: 139 SIHAIFIETSAKNAININEVFTQISERI 166 >gi|123471387|ref|XP_001318893.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] gi|62736286|gb|AAX97472.1| small Rab GTPase RabD2 [Trichomonas vaginalis] gi|121901664|gb|EAY06670.1| small GTP-binding protein, putative [Trichomonas vaginalis G3] Length = 195 Score = 114 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 64/209 (30%), Gaps = 48/209 (22%) Query: 55 PKERTILVLGSKCVGKTTAINKFFDRE-EHATRPTLALEYSFGRRIGSGKSPQVMNVWEL 113 P+ +++LG VGKT+ IN+F + + +PT+ + + G + + + +W+ Sbjct: 3 PEVVKVVLLGDSGVGKTSIINRFMTGKYSESLKPTIGAAFVTKNVVVEGHNLE-LRIWDT 61 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 + L + R+ + I++ D++ E + + + + Sbjct: 62 AGQEVYRGLAPMYYRSANI----AIIVYDVTNQ----PSYESVDYWVGELKKNLKNSSV- 112 Query: 174 ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC-RCLRSM 232 ++I G K D++ + + + Sbjct: 113 ------------------------------IMICGNKADLYDD------RVIHDSSAKDL 136 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHL 261 A G S L D Sbjct: 137 AAANGALYCETSASSGTGINQLFDMTISK 165 >gi|37681919|gb|AAQ97837.1| RAB22A, member RAS oncogene family [Danio rerio] Length = 196 Score = 114 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 64/208 (30%), Gaps = 46/208 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEESF-QTLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ R+ + + + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDL-----SDAREVSEKDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLG 262 I + S K + I Sbjct: 139 SIHAIFIETSAKNAININEVFTQISERI 166 >gi|150866330|ref|XP_001385886.2| predicted protein [Pichia stipitis CBS 6054] gi|149387586|gb|ABN67857.2| predicted protein [Pichia stipitis CBS 6054] Length = 224 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 72/221 (32%), Gaps = 45/221 (20%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSG 102 + + ++ I+ LG + VGKT+ I +F +D + T+ +++ Sbjct: 8 TPSGTSDKSNILRKYKIVFLGDQSVGKTSLITRFMYDTFDETYAATIGIDFLSKTMYLDD 67 Query: 103 KSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 + +W+ + L+ +R + ++ D++ + F K ++D Sbjct: 68 NRTIRLQLWDTAGQERFRSLIPSYIRDSHV----AVICYDITNKKSF----NNLDKWIKD 119 Query: 163 TAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIR 222 V + D +++VG K D+ + R Sbjct: 120 ------------------------VKLERGDDVI-------IVLVGNKSDLAND----KR 144 Query: 223 KHTCRCLRSMAHLIGGALL-FYSQKMPKLAKVLRDTICHLG 262 + T + ++ +G S K K+L I Sbjct: 145 QVTLEDVEALHRKVGSKFFIETSTKANHNVKLLFKKIAQSL 185 >gi|118365218|ref|XP_001015830.1| Ras family protein [Tetrahymena thermophila SB210] gi|89297597|gb|EAR95585.1| Ras family protein [Tetrahymena thermophila SB210] Length = 227 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 76/229 (33%), Gaps = 48/229 (20%) Query: 49 LEATTTPKER-TILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQ 106 TT P + I+ LG + VGKT+ IN+F +D + +PT+ +++ Sbjct: 2 QNTTTGPVVKFKIVFLGDQSVGKTSIINRFIYDNFTGSEQPTVGIDFICKTLQM-DNKTL 60 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 + +W+ + + L+ +R A I++ D++ F + + ++ Sbjct: 61 RLQLWDTAGQERFKSLIPSYIRDSN----AAIIVYDITNQNSFSNVTK-WVEEVK----- 110 Query: 167 MMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC 226 E+R + I+G K D+ RK + Sbjct: 111 -------------EERGNNAF----------------IFILGNKSDL------EDRKVSL 135 Query: 227 RCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVV 275 ++ A G S K + + G ++ + + Sbjct: 136 EEGQAKAKQFGLNFCEVSAKTGQNISSFFKNLSMTLSGGNSNETPNQQL 184 >gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, member RAS oncogene family [Macaca mulatta] Length = 304 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 75/243 (30%), Gaps = 51/243 (20%) Query: 59 TILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ + Sbjct: 101 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWDTAGQE 159 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 + R + +L+ D+++ + ++E K LRD A Sbjct: 160 RYRAITSAYYR----GAVGALLVYDIAK-HLTYENVERWLKELRDHAD------------ 202 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIG 237 +++VG K D+ +R R+ A G Sbjct: 203 ----------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAFAEKNG 235 Query: 238 GALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG 297 + + S + TI + + + D E + I Sbjct: 236 LSFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--NVVPIHVPP 290 Query: 298 AQS 300 Sbjct: 291 TTE 293 >gi|149642869|ref|NP_001092635.1| hypothetical protein LOC617385 [Bos taurus] gi|148744911|gb|AAI42191.1| MGC140196 protein [Bos taurus] Length = 194 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 68/216 (31%), Gaps = 46/216 (21%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDLI-----DVREVMERDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 I + S K L I + A P Sbjct: 139 SIHAVFVETSAKNAININELLIEISRRIPSTDASPP 174 >gi|15224916|ref|NP_181989.1| RAB6; GTP binding [Arabidopsis thaliana] gi|3341681|gb|AAC27463.1| putative small GTP-binding protein [Arabidopsis thaliana] gi|21593488|gb|AAM65455.1| putative small GTP-binding protein [Arabidopsis thaliana] gi|107738267|gb|ABF83670.1| At2g44610 [Arabidopsis thaliana] gi|110742258|dbj|BAE99055.1| putative small GTP-binding protein [Arabidopsis thaliana] gi|741994|prf||2008312A GTP-binding protein Length = 208 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 70/217 (32%), Gaps = 47/217 (21%) Query: 57 ERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 + ++ LG + VGKT+ I +F +D+ ++ + T+ +++ ++ + +W+ Sbjct: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ +R + +++ D++ Q F + +R Sbjct: 68 QERFRSLIPSYIRDSSV----AVIVYDVASRQSFLNTTK-WIDEVR-------------- 108 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 V++VG K D+ R+ + + A Sbjct: 109 --------------------TERGSDVIVVLVGNKTDLV-----DKRQVSIEEAEAKARE 143 Query: 236 IGGALLFYSQKMPKLAKVLRDTICHLGFGS-PAHPFR 271 + + S K K L I G + Sbjct: 144 LNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180 >gi|623586|gb|AAA74117.1| putative Length = 208 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 69/203 (33%), Gaps = 46/203 (22%) Query: 57 ERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 + ++ LG + VGKT+ I +F +D+ ++ + T+ +++ ++ + +W+ Sbjct: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VALQLWDTAG 67 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ +R + +++ D++ Q F + + +R Sbjct: 68 QERFRSLIPSYIRDSSV----AVIVYDVASRQSFLNTSK-WIEEVR-------------- 108 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 +++VG K D+ R+ + + A Sbjct: 109 --------------------TERGSDVIIVLVGNKTDLV-----EKRQVSIEEAEAKARE 143 Query: 236 IGGALLFYSQKMPKLAKVLRDTI 258 + + S K K L I Sbjct: 144 LNVMFIETSAKAGFNIKPLFRKI 166 >gi|145510136|ref|XP_001441001.1| hypothetical protein GSPATT00009876001 [Paramecium tetraurelia strain d4-2] gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia] gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia] Length = 205 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 76/235 (32%), Gaps = 58/235 (24%) Query: 59 TILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +N+F ++ T+ +E++ I K+ +W+ + Sbjct: 13 KLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKT-IKAQIWDTAGQE 71 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 + R + +++ D+++ E K +++ + E P L+ Sbjct: 72 RYRAITSAYYR----GAVGAMIIYDITKS----LTFENVDKWMKE----LKENADPSLQ- 118 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR----CLRSMA 233 ++IVG K D +KH + C + A Sbjct: 119 --------------------------IMIVGNKTD---------QKHIRQVATDCAIAYA 143 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA----HPFRSHVVDFNEPLCIW 284 G A + S K + I + S P + V + + Sbjct: 144 QRNGVAFIETSAKDGTNVEDAFKNILQQIYKSAKVVKPTPQPTKFVVADTDVVKP 198 >gi|147782540|emb|CAN75036.1| hypothetical protein [Vitis vinifera] gi|157341997|emb|CAO63453.1| unnamed protein product [Vitis vinifera] Length = 208 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 69/203 (33%), Gaps = 46/203 (22%) Query: 57 ERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 + ++ LG + VGKT+ I +F +D+ ++ + T+ +++ ++ + +W+ Sbjct: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 67 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ +R + +++ D++ Q F + + +R Sbjct: 68 QERFRSLIPSYIRDSSV----AVIVYDVASRQSFLNTSK-WIEEVR-------------- 108 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 +++VG K D+ R+ + + A Sbjct: 109 --------------------TERGSDVIIVLVGNKTDLV-----EKRQVSIEEGEAKARE 143 Query: 236 IGGALLFYSQKMPKLAKVLRDTI 258 + + S K K L I Sbjct: 144 LNVMFIETSAKAGFNIKALFRKI 166 >gi|118375516|ref|XP_001020942.1| Ras family protein [Tetrahymena thermophila SB210] gi|89302709|gb|EAS00697.1| Ras family protein [Tetrahymena thermophila SB210] Length = 197 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 46/201 (22%) Query: 56 KERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 ++ +++LG VGKT+ +N+F + + ++ TL + + + G +W+ Sbjct: 5 RDIKVVILGDAGVGKTSILNRFSNKGFDENSQTTLGASF-IPKVLTRGDKTYKFQIWDTA 63 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D++ F L+ + LR+ Sbjct: 64 GQEKYRSLAPLYYRD----THAALIVYDITNRASF-DVLKKWVQELREH----------- 107 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P + +VG K D+ D K+ + A+ Sbjct: 108 -----------------------GPANITIAVVGNKVDLI---DREDVKY--DEAKQYAN 139 Query: 235 LIGGALLFYSQKMPKLAKVLR 255 + + S K + + L Sbjct: 140 ELNAIFQYTSAKENQNIESLF 160 >gi|159463966|ref|XP_001690213.1| small rab-related GTPase [Chlamydomonas reinhardtii] gi|158284201|gb|EDP09951.1| small rab-related GTPase [Chlamydomonas reinhardtii] Length = 211 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 33/234 (14%), Positives = 78/234 (33%), Gaps = 48/234 (20%) Query: 49 LEATTTPKER-TILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQ 106 ATT+P + ++ LG + VGKT+ I +F +D+ ++ + T+ +++ ++ Sbjct: 2 SGATTSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRT-V 60 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 + +W+ + L+ +R + +++ D++ Q F + +R Sbjct: 61 RLQLWDTAGQERFRSLIPSYIRDSSV----AVVVYDITNRQSFLNTAR-WIQEVR----- 110 Query: 167 MMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC 226 + +VG K D+ R+ + Sbjct: 111 -----------------------------TERGNDVIIFLVGNKTDLI-----DKRQVSI 136 Query: 227 RCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA-HPFRSHVVDFNE 279 + A + + S K K L I G + + ++ + Sbjct: 137 EEGDAKARELNVNFIETSAKAGLNIKALFRKIAAALPGMESVTQNKQEQMEEVK 190 >gi|148747177|ref|NP_077756.2| RAB22A, member RAS oncogene family [Mus musculus] gi|46577691|sp|P35285|RB22A_MOUSE Ras-related protein Rab-22A (Rab-22) (Rab-14) gi|13879258|gb|AAH06596.1| RAB22A, member RAS oncogene family [Mus musculus] gi|14422309|emb|CAC41378.1| RAB22A protein [Mus musculus] gi|26327515|dbj|BAC27501.1| unnamed protein product [Mus musculus] gi|74144602|dbj|BAE27289.1| unnamed protein product [Mus musculus] gi|74151840|dbj|BAE29707.1| unnamed protein product [Mus musculus] gi|112293001|dbj|BAF02878.1| Rab22A [Mus musculus] gi|123232607|emb|CAM19927.1| RAB22A, member RAS oncogene family [Mus musculus] gi|148674704|gb|EDL06651.1| RAB22A, member RAS oncogene family, isoform CRA_a [Mus musculus] Length = 194 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 69/215 (32%), Gaps = 46/215 (21%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ + LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVRELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ R + A Sbjct: 107 -----------------------GPPSIVVAIAGNKCDL-----TDVREVMERDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 I + S K L I + A+P Sbjct: 139 SIHAIFVETSAKNAININELFIEISRRIPSTDANP 173 >gi|145538097|ref|XP_001454754.1| hypothetical protein GSPATT00020999001 [Paramecium tetraurelia strain d4-2] gi|74833783|emb|CAI39356.1| rab_A54 [Paramecium tetraurelia] gi|124422531|emb|CAK87357.1| unnamed protein product [Paramecium tetraurelia] Length = 196 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 71/219 (32%), Gaps = 44/219 (20%) Query: 42 EQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIG 100 + + K+ +++LG K VGK++ +F D+ + T+ Y+ Sbjct: 13 KTGIKTKSNNPGQKKDIKVVMLGDKAVGKSSIATRFCFDKFQSEYEITIGGVYNSVELTV 72 Query: 101 SGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGL 160 G++ ++ ++W+ + LL + R + +++ D++Q + F + K L Sbjct: 73 KGQNLKI-HLWDTAGEEKFRSLLSLYYRDANI----AVIVYDITQSESF-QSVSTWLKEL 126 Query: 161 RDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPI 220 + Q+ + +VG K D Sbjct: 127 EEKIQKD---------------------------------GMALALVGNKCDCLES---- 149 Query: 221 IRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIC 259 RK + A G S K + K L + Sbjct: 150 ERKVSKAMAVDFAKQNGMIFYETSAKTGEGVKNLFQHLI 188 >gi|134118235|ref|XP_772218.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var. neoformans B-3501A] gi|50254827|gb|EAL17571.1| hypothetical protein CNBM0510 [Cryptococcus neoformans var. neoformans B-3501A] Length = 213 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 73/216 (33%), Gaps = 46/216 (21%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSG 102 A+T K+ ++ LG + VGKT+ I +F +D ++ + T+ +++ Sbjct: 8 SSADFSSASTPLKKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLED 67 Query: 103 KSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 ++ + +W+ + L+ +R + +++ D++ F Sbjct: 68 RT-VRLQLWDTAGQERFRSLIPSYIRDSSV----AVIVYDITNRTSFQNT---------- 112 Query: 163 TAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIR 222 + + + + V +++VG K D+ R Sbjct: 113 ----------SKWVDDVRNERGQDVI---------------IVLVGNKTDL-----NDKR 142 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTI 258 + T L A +G + S K K L I Sbjct: 143 QVTPEDLDKRAKELGVMSIETSAKAGHNVKTLFKKI 178 >gi|57092883|ref|XP_531798.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 2 isoform 1 [Canis familiaris] Length = 107 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 5/109 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR+E +P Sbjct: 2 PSETLWEIAKAEVEKR---GSEGDGLEIGEKSVFFIGSKNGGKTTIILRCLDRDE-PPKP 57 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQL 135 TLALEY++GRR + + WELG + L+ +P+ + L+ + Sbjct: 58 TLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTV 106 >gi|157069725|gb|EAA28729.2| hypothetical protein NCU09982 [Neurospora crassa OR74A] Length = 527 Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 47/339 (13%), Positives = 102/339 (30%), Gaps = 73/339 (21%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK--------CVGKTTAINKFF 78 + +++ + + A P E+ IL+LG + + Sbjct: 22 NGEKEKKELWSSMLDS-----VASAKRLP-EKNILLLGGSVDSQREFFESLSRNELRRNT 75 Query: 79 DR---EEHATRPTLALEYSFGRRIGSGKSPQVMNVWE---LGSLDNAEQLLEVPMRTHGL 132 DR + + AL Y++ + + + + + L++ + + Sbjct: 76 DRQGSRKPPIANSFALGYTYYDVLDADQEDTLARISLYTLTDPSPAFASLIQPLITPQSI 135 Query: 133 QQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK 192 ++++LD SQP ++ L LR Q++ + + E + ER Sbjct: 136 PNTLIVILLDWSQPWKWMRQLREWILLLRTVFQKLNRECS-ATMEEVMTVWRERGRGGGL 194 Query: 193 DSEKLDPLPFP---------------------VIIVGGKYDVFSGFD---PIIRKHTCRC 228 + + +P V+I K D + Sbjct: 195 NLDGTSAVPTTSADADVSLPVGPGEWEDALANVMIQAEKMDHLEKTQGWKEEEFDVVLQF 254 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPFRSHVVDFNEPLCIWFG 286 LR++ L LG S P + +V+D ++ + + Sbjct: 255 LRTI---------------------LLRLHSSLGIHSLLKKQPLKHNVIDRDK-ILVPPN 292 Query: 287 TDSWSKIGDTGAQ-SVERIGATFGMEV---PQLQLEKQK 321 DSW KI VE + + + ++ Q ++ Sbjct: 293 WDSWGKIRVLREGFDVEAVSSGWTADLSIPWPRQPQRVA 331 >gi|108706607|gb|ABF94402.1| Ras-related protein Rab-6A, putative, expressed [Oryza sativa (japonica cultivar-group)] Length = 215 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 48/225 (21%) Query: 57 ERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 + ++ LG + VGKT I +F +D+ + + T+ +++ ++ + +W+ Sbjct: 10 KYKLVFLGDQAVGKTAIITRFMYDKFDATYQATIGIDFLSKTMYLEDRT-VRLQLWDTAG 68 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ +R + +++ D++ Q F + + + Sbjct: 69 QERFRSLIPSYIRDSSV----AVIVYDVTGKQSFL-SISKWIEEV--------------- 108 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 +++VG K D+ R+ + + A Sbjct: 109 -------------------NTQRGGDVIIVLVGNKTDLV-----DKRQISTDEGEAKAQE 144 Query: 236 IGGALLFYSQKMPKLAKVLRDTICHLGFGSP--AHPFRSHVVDFN 278 G + S K K L I G + + +VD N Sbjct: 145 HGAMFMETSAKAGFNIKPLFRKIAASLPGMEALSSAKQEDMVDIN 189 >gi|145549438|ref|XP_001460398.1| hypothetical protein GSPATT00003870001 [Paramecium tetraurelia strain d4-2] gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia] gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia] Length = 205 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 76/235 (32%), Gaps = 58/235 (24%) Query: 59 TILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGKT +N+F ++ T+ +E++ + K+ +W+ + Sbjct: 13 KLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKT-VKAQIWDTAGQE 71 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 + R + +++ D+++ E K +++ + E P L+ Sbjct: 72 RYRAITSAYYR----GAVGAMIIYDITKS----LTFENVDKWMKE----LKENADPSLQ- 118 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR----CLRSMA 233 ++IVG K D +KH + C + A Sbjct: 119 --------------------------IMIVGNKTD---------QKHIRQVATDCAIAYA 143 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA----HPFRSHVVDFNEPLCIW 284 G A + S K + I + S P + V + + Sbjct: 144 QRNGVAFIETSAKDGTNVEDAFKNILQQIYKSAKVVKPTPQPTKFVVADTDVVKP 198 >gi|62945396|ref|NP_001017427.1| RAS and EF hand domain containing [Mus musculus] gi|81871838|sp|Q5RI75|RASEF_MOUSE RAS and EF-hand domain-containing protein homolog gi|116138352|gb|AAI25540.1| RAS and EF hand domain containing [Mus musculus] Length = 627 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 77/232 (33%), Gaps = 42/232 (18%) Query: 22 TEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DR 80 + G S S + L+ + + T+ K I++ G VGK++ + + + Sbjct: 393 SAGEGSTLSSSRKPISALSLQTDMVDNTSKVTSQKAYKIVLAGDAAVGKSSFLMRLCKNE 452 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILM 140 + T TL +++ I G V+ +W+ + + + R V+L+ Sbjct: 453 FQGNTSATLGVDFQMKTLIVDG-EQTVLQLWDTAGQERFRSIAKSYFRKAD----GVLLL 507 Query: 141 LDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPL 200 D++ E ++ +R+ + + + + Sbjct: 508 YDVT--------CEKSFLNVREWVDMVED-----------------------GTHRT--- 533 Query: 201 PFPVIIVGGKYDVFSGFDPIIRKHTCRCL-RSMAHLIGGALLFYSQKMPKLA 251 P+++VG K D+ + +K L +A G S K Sbjct: 534 -IPIMLVGNKADLRDVDNAENQKCISAYLGEKLAMTYGALFCETSAKDGSNV 584 >gi|71894915|ref|NP_001026038.1| RAS-related protein RAB-22A [Gallus gallus] gi|53130292|emb|CAG31475.1| hypothetical protein [Gallus gallus] Length = 194 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 69/218 (31%), Gaps = 46/218 (21%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D + PT+ + + + + +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFL-IWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A I++ D+++ + F + L+ K LR Sbjct: 63 GQERFRALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELRQH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ +R+ + + A Sbjct: 107 -----------------------GPPNIVVAIAGNKCDL-----NDVREVMEKDAKDYAD 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRS 272 I + S K L I + +P S Sbjct: 139 SIHAIFVETSAKNAININELFIEISRRIPSTDTNPPSS 176 >gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Populus deltoides] Length = 201 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 57/205 (27%), Gaps = 45/205 (21%) Query: 59 TILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 +++LG VGK+ + +F + ++ T+ + + +W+ + Sbjct: 35 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGASFLSQTIALQDSTTIKFEIWDTAGQE 94 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 L + R +++ D++ P+ F + K L+ Sbjct: 95 RYAALAPLYYR----GAAVAVIVYDITSPETF-NKAQYWVKELQKH-------------- 135 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIG 237 + +VG K D+ R+ + A G Sbjct: 136 --------------------GSPDIVMALVGNKADL-----HEKREVPTQDGIEYAEKNG 170 Query: 238 GALLFYSQKMPKLAKVLRDTICHLG 262 + S K L + I Sbjct: 171 MFFIETSAKTADNINQLFEEIAKRL 195 >gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HOMOLOG A2A); GTP binding [Arabidopsis thaliana] gi|3024516|sp|O04486|RB11C_ARATH Ras-related protein Rab11C gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene. [Arabidopsis thaliana] gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana] gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana] gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana] gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana] Length = 217 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 72/224 (32%), Gaps = 50/224 (22%) Query: 59 TILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 ++++G VGK+ +++F + ++ T+ +E++ G++ +W+ + Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT-VKAQIWDTAGQE 72 Query: 118 NAEQLLEVPMRTHGLQQLA-VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + + +L+ D+++P F ++ K LRD A Sbjct: 73 RYR-----AITSAYYRGALGALLVYDVTKPTTF-ENVSRWLKELRDHAD----------- 115 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 ++++G K D+ +R +S A Sbjct: 116 -----------------------SNIVIMLIGNKTDL-----KHLRAVATEDAQSYAEKE 147 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP 280 G + + S + TI + +S D Sbjct: 148 GLSFIETSALEALNVEKAFQTILSEVYRII--SKKSISSDQTTA 189 >gi|149036251|gb|EDL90910.1| rCG35675, isoform CRA_b [Rattus norvegicus] Length = 243 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 83/238 (34%), Gaps = 52/238 (21%) Query: 20 KRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF- 78 +R GG + ++ L+ Q R R+ + ++++GS+ VGKT+ + +F Sbjct: 9 RRPAGGG-----LGAVSPALSGGQARRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTD 63 Query: 79 DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 D A + + +++ G + +W+ + + R+ +I Sbjct: 64 DTFCEACKCNVGVDFKIKTVELRG-KKIRLQIWDTAGQERFNSITSAYYRS----AKGII 118 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLD 198 L+ D+++ + F + K + +M++K E E Sbjct: 119 LVYDITKKETF----DDLPKWM-----KMIDKYASEDAE--------------------- 148 Query: 199 PLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI-GGALLFYSQKMPKLAKVLR 255 +++VG K D + R+ + + A I G S K + Sbjct: 149 -----LLLVGNKLDCETD-----REISRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 196 >gi|74210028|dbj|BAE21304.1| unnamed protein product [Mus musculus] Length = 555 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 35/232 (15%), Positives = 77/232 (33%), Gaps = 42/232 (18%) Query: 22 TEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DR 80 + G S S + L+ + + T+ K I++ G VGK++ + + + Sbjct: 321 SAGEGSTLSSSRKPISALSLQTDMVDNTSKVTSQKAYKIVLAGDAAVGKSSFLMRLCKNE 380 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILM 140 + T TL +++ I G V+ +W+ + + + R V+L+ Sbjct: 381 FQGNTSATLGVDFQMKTLIVDG-EQTVLQLWDTAGQERFRSIAKSYFRKAD----GVLLL 435 Query: 141 LDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPL 200 D++ E ++ +R+ + + + + Sbjct: 436 YDVT--------CEKSFLNVREWVDMVED-----------------------GTHRT--- 461 Query: 201 PFPVIIVGGKYDVFSGFDPIIRKHTCRCL-RSMAHLIGGALLFYSQKMPKLA 251 P+++VG K D+ + +K L +A G S K Sbjct: 462 -IPIMLVGNKADLRDVDNAENQKCISAYLGEKLAMTYGALFCETSAKDGSNV 512 >gi|146183027|ref|XP_001025689.2| Ras family protein [Tetrahymena thermophila SB210] gi|146143655|gb|EAS05444.2| Ras family protein [Tetrahymena thermophila SB210] Length = 246 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 34/244 (13%), Positives = 72/244 (29%), Gaps = 50/244 (20%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHA 84 + SI++I E Q + + ++ +G + VGKT+ IN+F D + Sbjct: 6 NNRNKSIKNIKQIEIEMQDQSITKQVKK----YKLVFIGDQSVGKTSIINRFINDSFQGT 61 Query: 85 TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 +PT+ +++ + +W+ + L+ +R A I++ D++ Sbjct: 62 QQPTVGIDFVAKTLHL-DNKTIRLQLWDTAGQERFRSLIPSYIRDSD----AAIIVYDIT 116 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPV 204 F + +R+ + Sbjct: 117 NQASF-ASVNKWLDYVREE----------------------------------RGDGVLI 141 Query: 205 IIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 +++ K D+ P R + A S K + + L G Sbjct: 142 VLLANKLDL-----PDQRAVQTVDGQQFAKQQNLIFSEVSAKEGNNINDVFKNLAQLLQG 196 Query: 265 SPAH 268 S Sbjct: 197 SEKS 200 >gi|125951222|ref|XP_697248.2| PREDICTED: hypothetical protein [Danio rerio] Length = 194 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 71/246 (28%), Gaps = 60/246 (24%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 +E + +LG VGK++ + +F D +H PT+ + SG +W+ Sbjct: 4 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFLTKTVP-SGNELHKFLIWDTA 62 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L + R A +++ D+++ F L+ K L++ Sbjct: 63 GQERFHSLAPMYYR----GSAAAVIVYDITKLDSF-QTLKKWVKELKEH----------- 106 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 P V I G K D+ IR+ + + A Sbjct: 107 -----------------------GPEDIVVAIAGNKNDLG-----DIREVPTKEAKEFAE 138 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG 294 I + S + + L I D + DS+ Sbjct: 139 SIAAIFMETSARNAVNIEELFQKIS-------RQIPPLENTDADS-------HDSFKLTR 184 Query: 295 DTGAQS 300 + Sbjct: 185 QPPPAT 190 >gi|126652803|ref|XP_001388379.1| Rab7 GTPase, putative [Cryptosporidium parvum Iowa II] gi|126117472|gb|EAZ51572.1| Rab7 GTPase, putative [Cryptosporidium parvum Iowa II] Length = 215 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 68/205 (33%), Gaps = 41/205 (20%) Query: 59 TILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 +++LG VGKT+ +N++ + + + T+ ++ + + +W+ + Sbjct: 16 KVIILGDSGVGKTSLMNQYVNSKFSTQYKATIGADFLTKDIVI-DNKLVTLQIWDTAGQE 74 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 + L R L+ D++ P+ F +GL ++ + + TP+ Sbjct: 75 RFQSLGVAFYRGAD----CCALVYDMTNPKSF--------EGLDAWREEFLIQATPK--- 119 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIG 237 DP FP +++G K D D RK + + + Sbjct: 120 --------------------DPNSFPFVVLGNKLD----LDQKSRKVSSQKASAWCKSKN 155 Query: 238 GALLFYSQKMPKLAKVLRDTICHLG 262 S K + I Sbjct: 156 IEYFETSAKNATNVDAAFEEIGRRA 180 >gi|6323642|ref|NP_013713.1| GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion, similar to mammalian Rab7 [Saccharomyces cerevisiae] gi|418594|sp|P32939|YPT7_YEAST GTP-binding protein YPT7 gi|5519|emb|CAA48244.1| GTP-binding protein (Ypt7p) [Saccharomyces cerevisiae] gi|728647|emb|CAA88515.1| Ypt7p [Saccharomyces cerevisiae] gi|1171484|dbj|BAA10973.1| small GTP binding protein [Saccharomyces cerevisiae] gi|151946160|gb|EDN64391.1| GTP-binding protein [Saccharomyces cerevisiae YJM789] Length = 208 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 41/227 (18%) Query: 59 TILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLD 117 +++LG VGKT+ ++++ D+ + T+ ++ G M VW+ + Sbjct: 10 KVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQE 69 Query: 118 NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELRE 177 + L R +L+ D++ F +++ A +PE Sbjct: 70 RFQSLGVAFYRGAD----CCVLVYDVTNASSF-ENIKSWRDEFLVHAN----VNSPET-- 118 Query: 178 ILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIG 237 FP +I+G K D + + + + + +A +G Sbjct: 119 ------------------------FPFVILGNKIDA----EESKKIVSEKSAQELAKSLG 150 Query: 238 -GALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCI 283 L S K + I + D+N+ + I Sbjct: 151 DIPLFLTSAKNAINVDTAFEEIARSALQQNQADTEAFEDDYNDAINI 197 >gi|50311935|ref|XP_455999.1| unnamed protein product [Kluyveromyces lactis] gi|49645135|emb|CAG98707.1| unnamed protein product [Kluyveromyces lactis NRRL Y-1140] Length = 212 Score = 112 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 73/216 (33%), Gaps = 44/216 (20%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQ 106 A T ++ I+ LG + VGKT+ I +F +D + + T+ +++ K+ Sbjct: 2 SEAAGKTLRKYKIVFLGEQGVGKTSLITRFMYDTFDDNYQATIGIDFLSKTMYLDDKT-I 60 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 + +W+ + L+ +R + I++ D++ + F E K + D Sbjct: 61 RLQLWDTAGQERFRSLIPSYIRDSHV----AIVVYDVTNRKSF----EYIDKWIEDV--- 109 Query: 167 MMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC 226 E E+ + ++IVG K D+ + T Sbjct: 110 --------KMERGEENVI-------------------LVIVGNKSDLVE----ERQVSTE 138 Query: 227 RCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 R L + S K K L I L Sbjct: 139 EGERKSTVLNAKLFIETSTKAGFNVKTLFKKIAKLL 174 Searching..................................................done Results from round 4 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melano... 367 e-100 gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light inter... 339 2e-91 gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 lig... 337 5e-91 gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain is... 333 1e-89 gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light int... 332 2e-89 gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoob... 332 3e-89 gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain i... 331 4e-89 gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein... 331 4e-89 gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermed... 330 8e-89 gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein... 330 1e-88 gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] 327 8e-88 gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 ligh... 326 1e-87 gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermed... 326 1e-87 gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 ... 321 6e-86 gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermed... 317 9e-85 gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] 314 5e-84 gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chai... 310 7e-83 gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermed... 304 6e-81 gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [S... 303 1e-80 gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermed... 300 1e-79 gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermedi... 300 1e-79 gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light int... 299 2e-79 gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculu... 299 3e-79 gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] 299 3e-79 gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light ... 299 3e-79 gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermed... 298 3e-79 gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light inte... 298 3e-79 gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin li... 298 3e-79 gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermed... 298 4e-79 gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light ... 298 4e-79 gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermedi... 298 5e-79 gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] 297 6e-79 gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermed... 297 1e-78 gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light ... 297 1e-78 gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light int... 297 1e-78 gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] 296 1e-78 gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A is... 295 2e-78 gi|157119433|ref|XP_001653379.1| conserved hypothetical protein ... 295 3e-78 gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo s... 295 4e-78 gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein li... 294 7e-78 gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light interme... 294 9e-78 gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light interme... 293 1e-77 gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 ... 293 1e-77 gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light int... 292 2e-77 gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella... 292 4e-77 gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo s... 291 4e-77 gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Dan... 291 5e-77 gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [D... 290 1e-76 gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae s... 288 5e-76 gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light inte... 287 1e-75 gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-interm... 285 2e-75 gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 ... 284 5e-75 gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibencla... 284 8e-75 gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light inter... 283 1e-74 gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-interm... 282 2e-74 gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic,... 282 2e-74 gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] 282 2e-74 gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] 281 6e-74 gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light... 280 1e-73 gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon n... 279 2e-73 gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon n... 274 8e-72 gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate ... 272 3e-71 gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] 272 4e-71 gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light inte... 271 4e-71 gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A... 271 5e-71 gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] 271 6e-71 gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon n... 268 5e-70 gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein... 266 1e-69 gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein li... 266 2e-69 gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [G... 265 3e-69 gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin li... 262 4e-68 gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Tr... 252 4e-65 gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosoph... 245 3e-63 gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] 244 6e-63 gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, is... 243 1e-62 gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoob... 242 2e-62 gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermed... 241 8e-62 gi|157128066|ref|XP_001661298.1| dynein light intermediate chain... 238 3e-61 gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermedi... 238 3e-61 gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella... 237 7e-61 gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938... 237 1e-60 gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00... 237 1e-60 gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [S... 232 3e-59 gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Tr... 232 4e-59 gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae s... 230 9e-59 gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chai... 227 9e-58 gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated fa... 225 3e-57 gi|146097038|ref|XP_001468017.1| dynein light intermediate chain... 220 2e-55 gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [... 217 7e-55 gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00... 216 2e-54 gi|157874331|ref|XP_001685649.1| dynein light intermediate chain... 215 4e-54 gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 ... 214 7e-54 gi|154343515|ref|XP_001567703.1| dynein light intermediate chain... 213 1e-53 gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 ligh... 212 3e-53 gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150... 211 7e-53 gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, m... 206 1e-51 gi|114675154|ref|XP_001147785.1| PREDICTED: similar to GTP-bindi... 204 7e-51 gi|73987203|ref|XP_854399.1| PREDICTED: similar to RAB11B, membe... 201 5e-50 gi|91076508|ref|XP_973251.1| PREDICTED: similar to CG5771-PB, is... 200 9e-50 gi|156551916|ref|XP_001607057.1| PREDICTED: similar to putative ... 200 1e-49 gi|149426497|ref|XP_001518037.1| PREDICTED: similar to rab11, pa... 199 3e-49 gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens] 199 3e-49 gi|115398722|ref|XP_001214950.1| conserved hypothetical protein ... 198 4e-49 gi|149692307|ref|XP_001496560.1| PREDICTED: similar to rab11 [Eq... 198 4e-49 gi|121713178|ref|XP_001274200.1| dynein light intermediate chain... 198 4e-49 gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [sy... 198 5e-49 gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon n... 198 6e-49 gi|84000297|ref|NP_001033251.1| hypothetical protein LOC534708 [... 198 6e-49 gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos] 198 6e-49 gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncog... 198 7e-49 gi|6679583|ref|NP_033023.1| RAB11B, member RAS oncogene family [... 198 7e-49 gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus] 197 8e-49 gi|4758984|ref|NP_004654.1| Ras-related protein Rab-11A [Homo sa... 197 8e-49 gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cry... 197 8e-49 gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus] 197 9e-49 gi|57524801|ref|NP_001005827.1| Ras-related protein Rab-11A [Gal... 197 9e-49 gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosoph... 197 9e-49 gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens] 197 1e-48 gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene fami... 196 1e-48 gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [H... 196 1e-48 gi|14249144|ref|NP_116006.1| RAB11B, member RAS oncogene family ... 196 1e-48 gi|149734235|ref|XP_001490105.1| PREDICTED: similar to Rab22a pr... 196 2e-48 gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus] 196 2e-48 gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japo... 196 2e-48 gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] 196 2e-48 gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca coagulata] 196 3e-48 gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermedia... 195 3e-48 gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermedi... 195 4e-48 gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries] 195 4e-48 gi|4758986|ref|NP_004209.1| RAB11B, member RAS oncogene family [... 195 4e-48 gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malas... 195 5e-48 gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene fami... 195 5e-48 gi|60302752|ref|NP_001012569.1| RAB11B, member RAS oncogene fami... 195 6e-48 gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Dan... 195 6e-48 gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens] 195 6e-48 gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase 195 6e-48 gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella... 194 7e-48 gi|50540176|ref|NP_001002555.1| hypothetical protein LOC436828 [... 194 7e-48 gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] 194 7e-48 gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus... 194 8e-48 gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human R... 194 9e-48 gi|131849|sp|P22129|RB11B_DISOM Ras-related protein Rab-11B (ORA... 194 9e-48 gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus] 194 1e-47 gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G P... 193 2e-47 gi|55925277|ref|NP_001007360.1| RAB11a, member RAS oncogene fami... 193 2e-47 gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene fam... 192 2e-47 gi|119479611|ref|XP_001259834.1| conserved hypothetical protein ... 192 3e-47 gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] 192 3e-47 gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon n... 192 3e-47 gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti] >gnl|BL_O... 191 5e-47 gi|52345666|ref|NP_001004880.1| MGC88884 protein [Xenopus tropic... 191 5e-47 gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlam... 191 8e-47 gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus] >gnl|BL... 191 8e-47 gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon n... 190 9e-47 gi|42543204|pdb|1OIW|A Chain A, X-Ray Structure Of The Small G P... 190 9e-47 gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vini... 190 1e-46 gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula] 190 1e-46 gi|148236881|ref|NP_001088852.1| hypothetical protein LOC496163 ... 190 1e-46 gi|94733945|emb|CAK04342.1| novel protein (zgc:55760) [Danio rerio] 190 1e-46 gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus] 190 1e-46 gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana] 190 2e-46 gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interact... 190 2e-46 gi|15230422|ref|NP_187823.1| AtRABA4d (Arabidopsis Rab GTPase ho... 189 2e-46 gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light int... 189 3e-46 gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound ... 189 3e-46 gi|3024528|sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV >gnl... 188 4e-46 gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella] 188 4e-46 gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 ... 188 4e-46 gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces po... 188 4e-46 gi|41056251|ref|NP_956417.1| hypothetical protein LOC386994 [Dan... 188 7e-46 gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HO... 188 7e-46 gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putativ... 187 1e-45 gi|147844837|emb|CAN83336.1| hypothetical protein [Vitis vinifer... 187 1e-45 gi|15222396|ref|NP_172221.1| AtRABA2b (Arabidopsis Rab GTPase ho... 186 1e-45 gi|3024501|sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C >gnl... 186 2e-45 gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis] 186 2e-45 gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Pha... 186 2e-45 gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab1... 185 3e-45 gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa (jap... 185 4e-45 gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein... 185 4e-45 gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In C... 185 4e-45 gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (jap... 185 4e-45 gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa (jap... 185 4e-45 gi|125951003|ref|XP_001345672.1| PREDICTED: hypothetical protein... 185 4e-45 gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase ho... 185 4e-45 gi|157358689|emb|CAO66374.1| unnamed protein product [Vitis vini... 185 5e-45 gi|157344192|emb|CAO69125.1| unnamed protein product [Vitis vini... 185 5e-45 gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon n... 185 5e-45 gi|15238392|ref|NP_201330.1| AtRABA4a (Arabidopsis Rab GTPase ho... 185 6e-45 gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_002... 185 6e-45 gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypi... 184 9e-45 gi|15233873|ref|NP_193578.1| AtRABA1e (Arabidopsis Rab GTPase ho... 184 9e-45 gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa (jap... 184 9e-45 gi|5902803|sp|P28188|ARA5_ARATH Ras-related protein ARA-5 >gnl|B... 184 1e-44 gi|17507543|ref|NP_490675.1| RAB family member (rab-11.1) [Caeno... 184 1e-44 gi|3024504|sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B >gnl... 184 1e-44 gi|147777473|emb|CAN62732.1| hypothetical protein [Vitis vinifer... 183 1e-44 gi|3024500|sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A >gnl... 183 1e-44 gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa (jap... 183 1e-44 gi|15237828|ref|NP_200723.1| AtRABA2d (Arabidopsis Rab GTPase ho... 183 1e-44 gi|115478587|ref|NP_001062887.1| Os09g0327100 [Oryza sativa (jap... 183 1e-44 gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza... 183 2e-44 gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana] 183 2e-44 gi|15236081|ref|NP_195699.1| AtRABH1c (Arabidopsis Rab GTPase ho... 183 2e-44 gi|145610591|ref|XP_368165.2| hypothetical protein MGG_01079 [Ma... 183 2e-44 gi|15236099|ref|NP_195709.1| ATGB3 (GTP-BINDING PROTEIN 3); GTP ... 182 2e-44 gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa] 182 2e-44 gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japo... 182 3e-44 gi|125562255|gb|EAZ07703.1| hypothetical protein OsI_028935 [Ory... 182 3e-44 gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain fam... 182 3e-44 gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis] 181 4e-44 gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Popul... 181 5e-44 gi|125604071|gb|EAZ43396.1| hypothetical protein OsJ_026879 [Ory... 181 6e-44 gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis ... 181 7e-44 gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii] 181 7e-44 gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ust... 181 7e-44 gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza ... 181 8e-44 gi|157338312|emb|CAO39356.1| unnamed protein product [Vitis vini... 181 8e-44 gi|114576516|ref|XP_001149988.1| PREDICTED: similar to Rab10 iso... 181 9e-44 gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa (jap... 181 9e-44 gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding pr... 180 1e-43 gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Cop... 180 1e-43 gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus N... 180 1e-43 gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein ... 180 1e-43 gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypi... 180 1e-43 gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekine... 180 1e-43 gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum] >g... 180 2e-43 gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene fami... 180 2e-43 gi|45191035|ref|NP_985289.1| AER434Cp [Ashbya gossypii ATCC 1089... 179 2e-43 gi|157745909|ref|XP_001668051.1| Hypothetical protein CBG03904 [... 179 3e-43 gi|109091480|ref|XP_001087750.1| PREDICTED: similar to RAS-relat... 179 3e-43 gi|147788245|emb|CAN75965.1| hypothetical protein [Vitis vinifera] 178 4e-43 gi|72180728|ref|XP_798729.1| PREDICTED: similar to Rab11b [Stron... 178 4e-43 gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum] >g... 178 5e-43 gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneif... 178 5e-43 gi|6321228|ref|NP_011305.1| GTPase of the Ypt/Rab family, very s... 178 5e-43 gi|147811153|emb|CAN70163.1| hypothetical protein [Vitis vinifer... 178 5e-43 gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aes... 178 5e-43 gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain fam... 178 5e-43 gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae s... 178 6e-43 gi|26341846|dbj|BAC34585.1| unnamed protein product [Mus musculus] 178 6e-43 gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa (jap... 178 7e-43 gi|126645710|ref|XP_001388049.1| Rab11, putative [Cryptosporidiu... 177 8e-43 gi|15227173|ref|NP_179816.1| AtRABH1d (Arabidopsis Rab GTPase ho... 177 9e-43 gi|118086786|ref|XP_428301.2| PREDICTED: similar to RAB31, membe... 177 1e-42 gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lema... 177 1e-42 gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis] 177 1e-42 gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideu... 177 1e-42 gi|109121541|ref|XP_001096759.1| PREDICTED: similar to RAB31, me... 177 1e-42 gi|39971217|ref|XP_366999.1| hypothetical protein MGG_03075 [Mag... 177 1e-42 gi|18410144|ref|NP_567008.1| ARA6; GTP binding [Arabidopsis thal... 177 1e-42 gi|62900806|sp|Q6GQP4|RAB31_RAT Ras-related protein Rab-31 (GTP-... 176 1e-42 gi|77404176|ref|NP_659562.2| RAB31, member RAS oncogene family [... 176 1e-42 gi|124513178|ref|XP_001349945.1| small GTPase Rab11 [Plasmodium ... 176 1e-42 gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella... 176 2e-42 gi|159102818|gb|EDP41716.1| hypothetical protein MGL_3924 [Malas... 176 2e-42 gi|19526850|ref|NP_598446.1| Rab31-like [Mus musculus] >gnl|BL_O... 176 2e-42 gi|74140181|dbj|BAE33804.1| unnamed protein product [Mus musculu... 176 2e-42 gi|116781044|gb|ABK21941.1| unknown [Picea sitchensis] 176 2e-42 gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideu... 176 2e-42 gi|50550715|ref|XP_502830.1| hypothetical protein [Yarrowia lipo... 176 2e-42 gi|147899039|ref|NP_001089868.1| hypothetical protein LOC734934 ... 176 2e-42 gi|149036685|gb|EDL91303.1| RAB7, member RAS oncogene family, is... 176 3e-42 gi|88192998|pdb|2FG5|A Chain A, Crystal Structure Of Human Rab31... 176 3e-42 gi|149720951|ref|XP_001489577.1| PREDICTED: similar to low-Mr GT... 176 3e-42 gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic prot... 175 3e-42 gi|62898742|dbj|BAD97225.1| RAB31, member RAS oncogene family va... 175 3e-42 gi|147225162|emb|CAN13146.1| RAB22A, member RAS oncogene family ... 175 3e-42 gi|50345016|ref|NP_001002178.1| hypothetical protein LOC431725 [... 175 4e-42 gi|73962207|ref|XP_850610.1| PREDICTED: similar to Ras-related p... 175 4e-42 gi|61372802|gb|AAX43915.1| RAB31 member RAS oncogene family [syn... 175 4e-42 gi|116004109|ref|NP_001070412.1| RAB31, member RAS oncogene fami... 175 4e-42 gi|60654153|gb|AAX29769.1| RAB31 member RAS oncogene family [syn... 175 4e-42 gi|50978970|ref|NP_001003208.1| RAS-related protein RAB-22A [Can... 175 4e-42 gi|54696912|gb|AAV38828.1| RAB31, member RAS oncogene family [sy... 175 4e-42 gi|33589861|ref|NP_006859.2| RAB31, member RAS oncogene family [... 175 4e-42 gi|114672239|ref|XP_523865.2| PREDICTED: RAB31, member RAS oncog... 175 5e-42 gi|7689359|gb|AAF67746.1|AF254800_1 GTP-binding protein Rab0 [Ra... 175 5e-42 gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, put... 175 5e-42 gi|145492744|ref|XP_001432369.1| hypothetical protein GSPATT0003... 175 6e-42 gi|145485217|ref|XP_001428617.1| hypothetical protein GSPATT0003... 175 6e-42 gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [... 175 7e-42 gi|1457954|gb|AAC50773.1| Rab22b 175 7e-42 gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene famil... 174 7e-42 gi|156035889|ref|XP_001586056.1| hypothetical protein SS1G_13149... 174 7e-42 gi|126302779|ref|XP_001368849.1| PREDICTED: similar to RAB22A, m... 174 8e-42 gi|157766202|ref|XP_001675444.1| Hypothetical protein CBG18559 [... 174 8e-42 gi|30583895|gb|AAP36196.1| Homo sapiens RAB22A, member RAS oncog... 174 8e-42 gi|126341423|ref|XP_001369723.1| PREDICTED: similar to Ras-relat... 174 9e-42 gi|119584836|gb|EAW64432.1| dynein, cytoplasmic 1, light interme... 174 1e-41 gi|10190714|ref|NP_065724.1| RAS-related protein RAB-22A [Homo s... 174 1e-41 gi|145332843|ref|NP_001078287.1| ARA6 [Arabidopsis thaliana] 174 1e-41 gi|157328625|emb|CAO22323.1| unnamed protein product [Vitis vini... 174 1e-41 gi|4678309|emb|CAB41100.1| small GTP-binding protein-like (fragm... 174 1e-41 gi|1710019|sp|P51154|RB22A_CANFA Ras-related protein Rab-22A (Ra... 173 1e-41 gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [C... 173 1e-41 gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa] 173 1e-41 gi|149030014|gb|EDL85106.1| RAB22A, member RAS oncogene family (... 173 1e-41 gi|158602493|gb|EDP38908.1| dynein light intermediate chain, put... 173 1e-41 gi|119180268|ref|XP_001241623.1| ras-related protein [Coccidioid... 173 1e-41 gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum] >g... 173 1e-41 gi|50285709|ref|XP_445283.1| unnamed protein product [Candida gl... 173 1e-41 gi|18568105|gb|AAL75941.1|AF125104_1 RAB22 [Homo sapiens] 173 1e-41 gi|148747177|ref|NP_077756.2| RAB22A, member RAS oncogene family... 173 1e-41 gi|10636479|emb|CAC10538.1| GTP-binding protein RAB22A [Homo sap... 173 2e-41 gi|85115075|ref|XP_964811.1| hypothetical protein [Neurospora cr... 173 2e-41 gi|67536988|ref|XP_662268.1| hypothetical protein AN4664.2 [Aspe... 173 2e-41 gi|157343673|emb|CAO68179.1| unnamed protein product [Vitis vini... 173 2e-41 gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium... 173 2e-41 gi|71894915|ref|NP_001026038.1| RAS-related protein RAB-22A [Gal... 173 2e-41 gi|147902449|ref|NP_001086223.1| MGC84182 protein [Xenopus laevi... 173 2e-41 gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabd... 173 2e-41 gi|56118785|ref|NP_991282.2| RAB22A, member RAS oncogene family ... 173 2e-41 gi|145529147|ref|XP_001450362.1| hypothetical protein GSPATT0001... 173 2e-41 gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bomb... 173 2e-41 gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa (jap... 173 2e-41 gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Crypto... 173 2e-41 gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus] 173 2e-41 gi|37681919|gb|AAQ97837.1| RAB22A, member RAS oncogene family [D... 173 2e-41 gi|71013586|ref|XP_758632.1| hypothetical protein UM02485.1 [Ust... 173 2e-41 gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, put... 172 3e-41 gi|54606871|ref|NP_001006108.1| RAB30, member RAS oncogene famil... 172 3e-41 gi|111071476|gb|EAT92596.1| hypothetical protein SNOG_01101 [Pha... 172 3e-41 gi|57524756|ref|NP_001005591.1| hypothetical protein LOC449549 [... 172 3e-41 gi|55742328|ref|NP_001007162.1| RAB1A, member RAS oncogene famil... 172 3e-41 gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max] 172 3e-41 gi|115397973|ref|XP_001214578.1| GTP-binding protein ypt5 [Asper... 172 3e-41 gi|156102877|ref|XP_001617131.1| small GTPase rab11, putative [P... 172 3e-41 gi|432607|gb|AAB28535.1| ras-related GTP binding protein possess... 172 3e-41 gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene famil... 172 3e-41 gi|149642869|ref|NP_001092635.1| hypothetical protein LOC617385 ... 172 3e-41 gi|81251485|gb|ABB70064.1| WSSV receptor Rab7 [Penaeus monodon] 172 4e-41 gi|60729663|pir||JC8006 Rab7 protein - sea anemone (Aiptasia pul... 172 4e-41 gi|119622000|gb|EAX01595.1| RAB31, member RAS oncogene family, i... 172 4e-41 gi|114577812|ref|XP_530454.2| PREDICTED: hypothetical protein [P... 172 4e-41 gi|113931342|ref|NP_001039118.1| RAB22A, member RAS oncogene fam... 172 4e-41 gi|47220716|emb|CAG11785.1| unnamed protein product [Tetraodon n... 172 4e-41 gi|131785|sp|P22125|RAB1_DISOM Ras-related protein ORAB-1 >gnl|B... 172 4e-41 gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subf... 172 4e-41 gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, i... 171 4e-41 gi|78045539|ref|NP_001030253.1| hypothetical protein LOC509970 [... 171 4e-41 gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [sy... 171 5e-41 gi|157341762|emb|CAO62317.1| unnamed protein product [Vitis vini... 171 5e-41 gi|126307942|ref|XP_001364024.1| PREDICTED: similar to ATP bindi... 171 5e-41 gi|4758988|ref|NP_004152.1| RAB1A, member RAS oncogene family [H... 171 6e-41 gi|41055538|ref|NP_957222.1| RAB family member rab-7 [Danio reri... 171 6e-41 gi|15217622|ref|NP_171715.1| ATRAB1B (Arabidopsis thaliana respo... 171 6e-41 gi|147902647|ref|NP_001090471.1| RAB31, member RAS oncogene fami... 171 6e-41 gi|156839424|ref|XP_001643403.1| hypothetical protein Kpol_1042p... 171 6e-41 gi|149640905|ref|XP_001513393.1| PREDICTED: similar to RAB1A, me... 171 7e-41 gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory p... 171 7e-41 gi|77736431|ref|NP_001029915.1| RAB5B, member RAS oncogene famil... 171 7e-41 gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus] 171 8e-41 gi|147902880|ref|NP_001085176.1| hypothetical protein LOC432259 ... 171 8e-41 gi|25150215|ref|NP_491199.2| RAB family member (rab-8) [Caenorha... 171 9e-41 gi|118087671|ref|XP_419342.2| PREDICTED: hypothetical protein [G... 171 9e-41 gi|145510136|ref|XP_001441001.1| hypothetical protein GSPATT0000... 170 1e-40 gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus] 170 1e-40 gi|125558411|gb|EAZ03947.1| hypothetical protein OsI_025179 [Ory... 170 1e-40 gi|41393545|ref|NP_004574.2| RAB5C, member RAS oncogene family i... 170 1e-40 gi|50979062|ref|NP_001003261.1| RAB5C, member RAS oncogene famil... 170 1e-40 gi|113866024|ref|NP_077776.2| RAB5C, member RAS oncogene family ... 170 1e-40 gi|74215300|dbj|BAE41866.1| unnamed protein product [Mus musculus] 170 1e-40 gi|149054244|gb|EDM06061.1| rCG32615, isoform CRA_a [Rattus norv... 170 1e-40 gi|149723790|ref|XP_001495006.1| PREDICTED: similar to Rab5c-lik... 170 1e-40 gi|56205120|emb|CAI24449.1| RAB1, member RAS oncogene family [Mu... 170 1e-40 gi|126652803|ref|XP_001388379.1| Rab7 GTPase, putative [Cryptosp... 170 1e-40 gi|47229587|emb|CAG06783.1| unnamed protein product [Tetraodon n... 170 1e-40 gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 1089... 170 1e-40 gi|149728225|ref|XP_001488351.1| PREDICTED: similar to RAB7 prot... 170 1e-40 gi|508285|gb|AAA74081.1| Rab5c-like protein, similar to Canis fa... 170 1e-40 gi|145549438|ref|XP_001460398.1| hypothetical protein GSPATT0000... 170 1e-40 gi|206553|gb|AAA42006.1| ras protein 170 1e-40 gi|115768277|ref|XP_782114.2| PREDICTED: hypothetical protein [S... 170 1e-40 gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a... 170 1e-40 gi|119183788|ref|XP_001242885.1| hypothetical protein CIMG_06781... 170 1e-40 gi|47223044|emb|CAG07131.1| unnamed protein product [Tetraodon n... 170 2e-40 gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptospor... 170 2e-40 gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10... 170 2e-40 gi|56118925|ref|NP_001008026.1| RAB7A, member RAS oncogene famil... 170 2e-40 gi|73535725|pdb|1YVD|A Chain A, Gppnhp-Bound Rab22 Gtpase 170 2e-40 gi|51247925|pdb|1VG1|A Chain A, Gdp-Bound Rab7 >gnl|BL_ORD_ID|13... 169 2e-40 gi|1050551|emb|CAA61797.1| rab7 [Mus musculus] 169 2e-40 gi|75070935|sp|Q5REC9|RAB8B_PONPY Ras-related protein Rab-8B >gn... 169 2e-40 Sequences not found previously or not previously below threshold: gi|66513627|ref|XP_623997.1| PREDICTED: similar to Rab-protein 1... 201 8e-50 gi|17137216|ref|NP_477170.1| Rab-protein 11 CG5771-PB, isoform B... 193 1e-47 gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster] 191 4e-47 gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans] 191 5e-47 gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097... 191 7e-47 gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346... 191 8e-47 gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus] 186 3e-45 gi|147789804|emb|CAN62934.1| hypothetical protein [Vitis vinifer... 185 4e-45 gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa (jap... 185 6e-45 gi|85082713|ref|XP_956972.1| hypothetical protein ( (NM_017382) ... 184 9e-45 gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa (jap... 184 1e-44 gi|158292354|ref|XP_313857.2| AGAP004559-PD [Anopheles gambiae s... 183 1e-44 gi|15218719|ref|NP_174177.1| AtRABA1i (Arabidopsis Rab GTPase ho... 183 1e-44 gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis] 183 1e-44 gi|157354705|emb|CAO48023.1| unnamed protein product [Vitis vini... 183 2e-44 gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum] >g... 183 2e-44 gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270... 182 3e-44 gi|15232652|ref|NP_190267.1| AtRABA2c/AtRab11A (Arabidopsis Rab ... 182 4e-44 gi|147834751|emb|CAN75016.1| hypothetical protein [Vitis vinifer... 181 5e-44 gi|147802502|emb|CAN73117.1| hypothetical protein [Vitis vinifera] 181 7e-44 gi|109940137|sp|P25766|RGP1_ORYSJ Ras-related protein RGP1 (GTP-... 181 8e-44 gi|267527|sp|Q01111|YPT3_NICPL Ras-related protein YPT3 >gnl|BL_... 180 1e-43 gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa (jap... 179 2e-43 gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum] >g... 179 2e-43 gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max] 179 3e-43 gi|1381676|gb|AAB97114.1| small GTP-binding protein [Glycine max] 179 3e-43 gi|15234020|ref|NP_193615.1| AtRABA1d/AtRab11B/AthSGBP (Arabidop... 178 4e-43 gi|3024502|sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D >gnl... 178 5e-43 gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa (jap... 178 5e-43 gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum] 178 6e-43 gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thali... 178 7e-43 gi|125605011|gb|EAZ44047.1| hypothetical protein OsJ_027530 [Ory... 178 7e-43 gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gib... 178 7e-43 gi|125546399|gb|EAY92538.1| hypothetical protein OsI_013771 [Ory... 178 8e-43 gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa] 177 1e-42 gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabido... 177 1e-42 gi|109105440|ref|XP_001118047.1| PREDICTED: similar to RAB1B, me... 176 1e-42 gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p1... 176 2e-42 gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa] 176 2e-42 gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha gr... 176 2e-42 gi|15226182|ref|NP_180943.1| ArRABA1h (Arabidopsis Rab GTPase ho... 176 2e-42 gi|50292391|ref|XP_448628.1| unnamed protein product [Candida gl... 175 4e-42 gi|157327287|emb|CAO15080.1| unnamed protein product [Vitis vini... 175 4e-42 gi|3024505|sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D >gnl... 175 4e-42 gi|125808502|ref|XP_692506.2| PREDICTED: similar to Rab11b prote... 175 4e-42 gi|157761211|ref|XP_001672948.1| Hypothetical protein CBG01077 [... 175 5e-42 gi|17558550|ref|NP_503397.1| RAB family member (rab-1) [Caenorha... 175 5e-42 gi|114638536|ref|XP_001150399.1| PREDICTED: similar to RAB1B, me... 175 6e-42 gi|15231462|ref|NP_187397.1| AtRABA5b (Arabidopsis Rab GTPase ho... 175 6e-42 gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lema... 175 6e-42 gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum] 175 6e-42 gi|57530730|ref|NP_001006363.1| RAB5A, member RAS oncogene famil... 174 7e-42 gi|145614042|ref|XP_363259.2| RAB GTPase Ypt5 [Magnaporthe grise... 174 7e-42 gi|12832758|dbj|BAB22245.1| unnamed protein product [Mus musculus] 174 7e-42 gi|17555956|ref|NP_499454.1| RAB family member (rab-35) [Caenorh... 174 8e-42 gi|19923262|ref|NP_004153.2| RAB5A, member RAS oncogene family [... 173 1e-41 gi|157773755|ref|XP_001664943.1| Hypothetical protein CBG13205 [... 173 1e-41 gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis] >gnl|BL_O... 173 1e-41 gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis] 173 1e-41 gi|114585675|ref|XP_516319.2| PREDICTED: RAB5A, member RAS oncog... 173 2e-41 gi|3024503|sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C >gnl... 173 2e-41 gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana ... 173 2e-41 gi|12083645|ref|NP_073183.1| RAB5A, member RAS oncogene family [... 173 2e-41 gi|149634147|ref|XP_001508982.1| PREDICTED: similar to Ras-relat... 173 2e-41 gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C, put... 173 2e-41 gi|13385374|ref|NP_080163.1| RAB5A, member RAS oncogene family [... 173 2e-41 gi|50979150|ref|NP_001003317.1| GTP-binding protein (rab5) [Cani... 173 2e-41 gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella... 173 2e-41 gi|156387431|ref|XP_001634207.1| predicted protein [Nematostella... 173 2e-41 gi|115495947|ref|NP_001069654.1| hypothetical protein LOC539764 ... 173 2e-41 gi|122131883|sp|Q06AU6|RAB5A_PIG Ras-related protein Rab-5A >gnl... 173 2e-41 gi|56118881|ref|NP_001008068.1| RAB5A, member RAS oncogene famil... 173 2e-41 gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicot... 173 3e-41 gi|147899221|ref|NP_001080535.1| RAB5A, member RAS oncogene fami... 172 3e-41 gi|45185690|ref|NP_983406.1| ACR003Cp [Ashbya gossypii ATCC 1089... 172 3e-41 gi|50553762|ref|XP_504292.1| YlRYL1 [Yarrowia lipolytica] >gnl|B... 172 3e-41 gi|148222944|ref|NP_001080714.1| Rab-protein 5 [Xenopus laevis] ... 172 3e-41 gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Bab... 172 3e-41 gi|66556180|ref|XP_392967.2| PREDICTED: similar to Rab-protein 1... 172 3e-41 gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1, put... 172 4e-41 gi|15238852|ref|NP_199607.1| SMG1 (SMALL MOLECULAR WEIGHT G-PROT... 172 4e-41 gi|70994486|ref|XP_752022.1| RAB GTPase Ypt5, putative [Aspergil... 172 4e-41 gi|6320869|ref|NP_010948.1| GTPase of the Ypt/Rab family, very s... 172 4e-41 gi|74219413|dbj|BAE29485.1| unnamed protein product [Mus musculus] 171 4e-41 gi|125546252|gb|EAY92391.1| hypothetical protein OsI_013624 [Ory... 171 5e-41 gi|85109909|ref|XP_963146.1| GTP-BINDING PROTEIN YPT1 [Neurospor... 171 5e-41 gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus] 171 6e-41 gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossyp... 171 6e-41 gi|41393127|ref|NP_958893.1| RAB5A, member RAS oncogene family [... 171 6e-41 gi|550070|gb|AAA60245.1| GTP-binding protein 171 6e-41 gi|67526769|ref|XP_661446.1| hypothetical protein AN3842.2 [Aspe... 171 6e-41 gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabi... 171 7e-41 gi|72535190|ref|NP_001026957.1| RAB1B, member RAS oncogene famil... 171 8e-41 gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa] 171 8e-41 gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus... 171 9e-41 gi|45383121|ref|NP_989856.1| RAB5C, member RAS oncogene family [... 171 9e-41 gi|623584|gb|AAA74116.1| putative 170 1e-40 gi|145257106|ref|XP_001401615.1| hypothetical protein An04g02470... 170 1e-40 gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic prot... 170 1e-40 gi|121706988|ref|XP_001271697.1| RAB GTPase Ypt5, putative [Aspe... 170 1e-40 gi|54399922|gb|AAV34202.1| Rab5 protein [Aiptasia pulchella] 170 1e-40 gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsu... 170 1e-40 gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Sol... 170 1e-40 gi|56693355|ref|NP_001008641.1| RAB25, member RAS oncogene famil... 170 1e-40 gi|125844561|ref|XP_001331029.1| PREDICTED: hypothetical protein... 170 1e-40 gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative... 170 1e-40 gi|157354270|emb|CAO46871.1| unnamed protein product [Vitis vini... 170 2e-40 gi|125588449|gb|EAZ29113.1| hypothetical protein OsJ_012596 [Ory... 170 2e-40 gi|2500076|sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT... 170 2e-40 gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassi... 170 2e-40 gi|71896479|ref|NP_001025499.1| RAB5C, member RAS oncogene famil... 170 2e-40 gi|158593959|gb|EDP32553.1| Ras-related protein Rab-5B, putative... 170 2e-40 gi|466172|sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 >gnl|B... 170 2e-40 gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thal... 170 2e-40 gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus] 170 2e-40 gi|15236555|ref|NP_193486.1| RAB1C; GTP binding [Arabidopsis tha... 169 2e-40 >gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melanogaster] gi|22946025|gb|AAF52775.2| CG3769-PA [Drosophila melanogaster] gi|66770889|gb|AAY54756.1| IP11319p [Drosophila melanogaster] Length = 368 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 368/368 (100%), Positives = 368/368 (100%) Query: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI Sbjct: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 Query: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE Sbjct: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE Sbjct: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 Query: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL Sbjct: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS Sbjct: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 Query: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR Sbjct: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 Query: 361 GKFESVQT 368 GKFESVQT Sbjct: 361 GKFESVQT 368 >gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light intermediate chain isoform 1 [Pan troglodytes] Length = 351 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 176/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK++EL R K Sbjct: 298 PPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 light intermediate chain [Gallus gallus] Length = 637 Score = 337 bits (866), Expect = 5e-91, Method: Composition-based stats. Identities = 115/380 (30%), Positives = 191/380 (50%), Gaps = 24/380 (6%) Query: 2 RLPLIFHSLHQRLQKMFVKRTEGGES------ATPSIQDIAGRLAEEQQRLRQLEATTTP 55 RLP L +RL +R G A ++ DIA E+++ Sbjct: 256 RLPAE-LQLPERLAPFPWRRAAGPGRIAAMPKAGDTLWDIARDEVEKRENNGDDGKRVEV 314 Query: 56 KERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS-PQVMNVWELG 114 E+++L +GSK GKTT I + +R E +PTL LEY+FGRR + + + WE+G Sbjct: 315 CEKSVLFMGSKNGGKTTIILRCLER-EEVPKPTLVLEYTFGRRARRHNAPKDIAHFWEIG 373 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV--- 171 + +L+ +P+ + ++ AV+L+LDLS+P W +E + R+ +++ K+ Sbjct: 374 GGTSLLELIRIPITVNNIRSFAVVLVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKT 433 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 PE+ ++Q+ + + + D + +DP P P++I+G KYD+F FD +RK R LR Sbjct: 434 DPEVAAEIKQKMQNNLQRDHPDYDLVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRF 493 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 ++H G +L+F S+ L K R I HL FG +S VD ++PL I G DS S Sbjct: 494 VSHYYGASLVFTSKSEALLLK-ARALINHLAFGYDRS--KSVSVDHSKPLFIPAGLDSLS 550 Query: 292 KIGDTGAQS--VERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEI 342 +IG + ++ A +E+ + EK L+++ DPA+ + E +D + Sbjct: 551 QIGPPPTSDSNIGKMRANTPLELWKKVFEKTFPPRSFSDLQDSKDPAQVSQYAEYEVDVM 610 Query: 343 RSQKNEELAGLMRDVLLRGK 362 R+QKN+E R+ K Sbjct: 611 RAQKNQEFEQYKRNASKSWK 630 >gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain isoform 1 variant [Homo sapiens] Length = 351 Score = 333 bits (854), Expect = 1e-89, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 174/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K LR I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-LRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 298 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 345 >gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] gi|81673547|gb|AAI09911.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] Length = 351 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 109/348 (31%), Positives = 176/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGSSENEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E LDP P P Sbjct: 121 NDLWPTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKDHPDRELLDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G + +S VD N+PL I G DS S+IG + ++ A M++ + EK Sbjct: 240 GI--NKSKSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDLWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPAKDP + E +DE+R QK++EL R K Sbjct: 298 PPKSINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoobscura] gi|54645577|gb|EAL34315.1| GA17674-PA [Drosophila pseudoobscura] Length = 368 Score = 332 bits (851), Expect = 3e-89, Method: Composition-based stats. Identities = 294/368 (79%), Positives = 331/368 (89%), Gaps = 1/368 (0%) Query: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 MRLP IF S H+R+ +MF K TEGG++ATPSIQDIAGRLAEEQQRLRQLEAT+ PKERT+ Sbjct: 1 MRLPQIFLSWHKRILRMFEKSTEGGDNATPSIQDIAGRLAEEQQRLRQLEATSMPKERTL 60 Query: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 LVLGSKCVGK+TAINKFFDREEH TRPTLALEYSFGRRIGSG+SPQV+NVWELGSLDNA+ Sbjct: 61 LVLGSKCVGKSTAINKFFDREEHTTRPTLALEYSFGRRIGSGRSPQVINVWELGSLDNAD 120 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 QLLEVPMRTHGLQQLAV +M+DLSQPQRFWTDLECAYKGLR T+Q+++ ++TPELRE LE Sbjct: 121 QLLEVPMRTHGLQQLAVFIMVDLSQPQRFWTDLECAYKGLRVTSQELLARMTPELRETLE 180 Query: 181 QRTVERVGQQN-KDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGA 239 QRT+ERVG QN +D L+ LPFPV+IVGGKYDVF DP ++K CRCLRSMAH IGGA Sbjct: 181 QRTLERVGHQNKEDLGTLELLPFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGA 240 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 LLFYSQK+PKL+KVLRDTI H+GFGSP+HPFRSHV D NEPL +WFGTDSWS+IGDTGAQ Sbjct: 241 LLFYSQKVPKLSKVLRDTISHMGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDTGAQ 300 Query: 300 SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLL 359 SVERIGATFG+ VPQLQLEKQ + DPAKDPGFKE +IDE+R+QKNEELA +MRDVLL Sbjct: 301 SVERIGATFGVAVPQLQLEKQLQQVPQDPAKDPGFKESLIDEMRAQKNEELATIMRDVLL 360 Query: 360 RGKFESVQ 367 RGKFESVQ Sbjct: 361 RGKFESVQ 368 >gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain isoform 1 [Homo sapiens] gi|19908231|gb|AAL99216.1| dynein 2 light intermediate chain [Homo sapiens] gi|119620696|gb|EAX00291.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_c [Homo sapiens] Length = 351 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 173/348 (49%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 298 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 345 >gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein [Equus caballus] Length = 351 Score = 331 bits (850), Expect = 4e-89, Method: Composition-based stats. Identities = 106/348 (30%), Positives = 175/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSDTLWEIAKAEVEKRGSNGSESDGVEIGEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVNKVIMKLGKKNSKASSEMRQKIWSNMQKDHPDREIIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS S+IG + ++ A ME+ + E+ Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMELWKKVYERLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK++EL R K Sbjct: 298 PPKNTNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|20988526|gb|AAH30450.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|24659541|gb|AAH39070.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 351 Score = 330 bits (847), Expect = 8e-89, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 178/348 (51%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E+++ E+++ +GSK GKTT I + DR + + +P Sbjct: 2 PSETLWEIAKAEVEKRRSHGSEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDR-DESAKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W+ +E + + +++ K+ + + + QR V + + D E +DP P P Sbjct: 121 NDLWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS +IG + ++ A ME+ + +K Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 298 PPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWK 345 >gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 387 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 110/369 (29%), Positives = 187/369 (50%), Gaps = 21/369 (5%) Query: 11 HQRLQKMFVKRTEGGESA----TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK 66 +Q ++ V + G + + ++ +IA E+++ E+++ +GSK Sbjct: 17 NQEVRSFQVLWPDSGLRSAAQLSDTLWEIAKAEVEKREISENGGDGAEVCEKSVFFIGSK 76 Query: 67 CVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEV 125 GKTT I + DR + +PTLALEY++GRR + + + WELG + L+ + Sbjct: 77 NGGKTTIILRCLDR-DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISI 135 Query: 126 PMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQR 182 P+ L+ +++L+LDLS+P W +E + + +++ K+ + + + Q+ Sbjct: 136 PITNESLRTFSLVLVLDLSKPNDLWPTMESLLQVTKAHVDKLIMKLGKTSTKAASEMRQK 195 Query: 183 TVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLF 242 + + + D E +DP P P++I+G KYD+F FD RK C+ LR ++H G +L+F Sbjct: 196 MWSNMQKDHPDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMF 255 Query: 243 YSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQS 300 S+ L K +R I L FG +S VD N+PL I G DS S+IG Sbjct: 256 ASKSEALLLK-IRGVINQLAFGIDKS--KSISVDQNKPLFIPAGLDSLSQIGSPPLSENE 312 Query: 301 VERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGL 353 + ++ A ME+ + EK KET DPA+DP + E +DE+R+QK++EL Sbjct: 313 IGKLHAQTPMELWKKVYEKVFPPKSANTSKETRDPARDPQYAESEVDEMRAQKDQELEQY 372 Query: 354 MRDVLLRGK 362 ++ K Sbjct: 373 KKNTSKSWK 381 >gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] Length = 350 Score = 327 bits (839), Expect = 8e-88, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 172/348 (49%), Gaps = 18/348 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIW-NYAEDHPDHELIDPFPVP 179 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 180 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 238 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 239 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 296 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 297 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 344 >gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 2 [Canis familiaris] Length = 348 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 106/348 (30%), Positives = 173/348 (49%), Gaps = 20/348 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKR---GSEGDGLEIGEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 57 Query: 88 TLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 58 TLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTFSIVLVLDLSKP 117 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +M+ K+ + + Q+ + + + D E +DP P Sbjct: 118 NDLWPTMENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIP 177 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 178 LVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-VRGVINQLAF 236 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS S+IG + ++ A M++ + E+ Sbjct: 237 GIDKS--KSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVF 294 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 295 PPKSTNTLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWK 342 >gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|62822153|gb|AAY14702.1| unknown [Homo sapiens] gi|119620694|gb|EAX00289.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 352 Score = 326 bits (837), Expect = 1e-87, Method: Composition-based stats. Identities = 107/349 (30%), Positives = 173/349 (49%), Gaps = 18/349 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNK-DSEKLDPLPF 202 W +E + + +++ K+ + + Q+ + + + D E +DP P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPQDHELIDPFPV 180 Query: 203 PVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 P++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L Sbjct: 181 PLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLA 239 Query: 263 FGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQSVERIGATFGMEVPQLQLEK- 319 FG +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 FGIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKL 297 Query: 320 ------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 298 FPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 346 >gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 [Macaca mulatta] Length = 365 Score = 321 bits (823), Expect = 6e-86, Method: Composition-based stats. Identities = 101/350 (28%), Positives = 164/350 (46%), Gaps = 15/350 (4%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + ++ +IA E++ E+++ +GSK GKTT I + DR+ Sbjct: 13 PQKIIETLWEIAKAEVEKRGINGSEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDRDRPP 72 Query: 85 TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 G + + WELG + L+ VP+ + L+ +++L+LDLS Sbjct: 73 KMVLFLFFSFSFCHPGWSTPKDIAHFWELGGGTSLLDLISVPITSDTLRTFSLVLVLDLS 132 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLP 201 +P W +E + + +M+ K+ P+ + Q+ + + + D E +DP P Sbjct: 133 KPNDLWPTMENLLQATKSHVDKMIMKLGKTNPKAASEMRQKIWNNMQKDHPDRELIDPFP 192 Query: 202 FPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHL 261 P++I+G KYD+F F+ RK C+ LR +AH G +L+F S+ L K +R I L Sbjct: 193 VPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQL 251 Query: 262 GFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK 319 FG +S VD N+PL I G DS+S+IG + ++ A ME+ + EK Sbjct: 252 AFGIDKS--KSICVDQNKPLLITAGLDSFSQIGSPPVPENDIGKLHAHSPMELWKKVYEK 309 Query: 320 -------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 310 LFPPKSINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 359 >gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermediate chain isoform 2 [Pan troglodytes] Length = 334 Score = 317 bits (812), Expect = 9e-85, Method: Composition-based stats. Identities = 104/336 (30%), Positives = 173/336 (51%), Gaps = 17/336 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEEL 350 LK+ DPA+DP + E +DE+R QK++ L Sbjct: 298 PPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQVL 333 >gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] Length = 358 Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats. Identities = 323/324 (99%), Positives = 323/324 (99%) Query: 45 RLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS 104 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS Sbjct: 35 LLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS 94 Query: 105 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 164 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA Sbjct: 95 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 154 Query: 165 QQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKH 224 QQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKH Sbjct: 155 QQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKH 214 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW Sbjct: 215 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 274 Query: 285 FGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 FGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS Sbjct: 275 FGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 334 Query: 345 QKNEELAGLMRDVLLRGKFESVQT 368 QKNEELAGLMRDVLLRGKFESVQT Sbjct: 335 QKNEELAGLMRDVLLRGKFESVQT 358 >gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chain isoform 3 [Homo sapiens] Length = 334 Score = 310 bits (796), Expect = 7e-83, Method: Composition-based stats. Identities = 103/333 (30%), Positives = 169/333 (50%), Gaps = 17/333 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKN 347 LK+ DPA+DP + E +DE+R QK+ Sbjct: 298 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKD 330 >gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_a [Mus musculus] Length = 527 Score = 304 bits (780), Expect = 6e-81, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 118/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 52 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 107 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 108 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 165 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 166 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 223 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 224 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 283 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 284 EHLDFIQAHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 341 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 342 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 401 Query: 340 DEIRS 344 + + Sbjct: 402 QSLLA 406 >gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115941395|ref|XP_001177851.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 363 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 184/350 (52%), Gaps = 16/350 (4%) Query: 27 SATPSIQDIAGRLAEEQ--QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + SI DIA AE++ ++ E IL +GSK GKT+ I +F ++ E A Sbjct: 4 NKEKSIWDIAILEAEQKHATESKEQGGEAKGSENHILFIGSKNAGKTSIILRFLEK-EEA 62 Query: 85 TRPTLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 +PT+ALEY+FGRR + ++WELG QL E+P+ + ++++++DL Sbjct: 63 PKPTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDL 122 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPL 200 SQP W +E KG D +Q++ K P++++ +++R +R+G + D + LDP Sbjct: 123 SQPYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHPDRDMLDPF 182 Query: 201 PFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICH 260 P P++IVG KYDV+ FDP RK + LR +AH G AL F S K L ++ + H Sbjct: 183 PLPLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTKNLVSH 242 Query: 261 LGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQSVERIGATFGMEVPQL--- 315 L FG+ ++ +D N+P+ + FG DS +IG + R A +++ + Sbjct: 243 LAFGTTL-SLKTISIDPNKPISVPFGLDSLEQIGLPPVADDDLGRSNARTPLDLWKQAFT 301 Query: 316 --QLEKQKLKET-TDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 +K +K DP+KDP + E +D +R QKN+EL + R K Sbjct: 302 SYFPQKSTIKAIVEDPSKDPQYAEAAVDNMREQKNKELERYRKQAERRAK 351 >gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|73919260|sp|Q8R1Q8|DC1L1_MOUSE Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|19484061|gb|AAH23347.1| Dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|74198263|dbj|BAE35301.1| unnamed protein product [Mus musculus] gi|148677352|gb|EDL09299.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] Length = 523 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 68/372 (18%), Positives = 123/372 (33%), Gaps = 50/372 (13%) Query: 10 LHQRLQKMFVKRTEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 L L G Q++ L+E R R + P + +L+LG Sbjct: 26 LANELASGSGGPAAGD---DEDGQNLWSCILSEVSTRSR----SKLPTGKNVLLLGEDGA 78 Query: 69 GKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPM 127 GKT+ I + E + LEY + + Q NVW L + LL+ + Sbjct: 79 GKTSLIRR-IQGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSL 136 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERV 187 L+ V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ + Sbjct: 137 DALSLRDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKL--KIPPEEMKEMEQKLIRDF 194 Query: 188 GQQNKDSEK-----------------------------LDPLPFPVIIVGGKYDVFSGFD 218 + + E L PV++V K D S + Sbjct: 195 QEYVEPGEDFPASPQRRTTGAQEDRGDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLE 254 Query: 219 PII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRS 272 +R G AL++ S K K ++ I +G Sbjct: 255 KEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIP 312 Query: 273 HVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDP 332 VV + + I G D+ KIG ++ ++ + E A+D Sbjct: 313 AVVVEKDAVFIPAGWDNDKKIGILHENFQTLKVEDNFEDIITKPPVRKFVHEKEIMAEDD 372 Query: 333 GFKELVIDEIRS 344 + + + + Sbjct: 373 QVFLMKLQSLLA 384 >gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 300 bits (768), Expect = 1e-79, Method: Composition-based stats. Identities = 68/372 (18%), Positives = 123/372 (33%), Gaps = 50/372 (13%) Query: 10 LHQRLQKMFVKRTEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 L L G Q++ L+E R R + P + +L+LG Sbjct: 26 LANELASGSGGPAAGD---DEDGQNLWSCILSEVSTRSR----SKLPTGKNVLLLGEDGA 78 Query: 69 GKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPM 127 GKT+ I + E + LEY + + Q NVW L + LL+ + Sbjct: 79 GKTSLIRR-IQGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSL 136 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERV 187 L+ V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ + Sbjct: 137 DALSLRDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKL--KIPPEEMKEMEQKLIRDF 194 Query: 188 GQQNKDSEK-----------------------------LDPLPFPVIIVGGKYDVFSGFD 218 + + E L PV++V K D S + Sbjct: 195 QEYVEPGEDFPASPQRRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLE 254 Query: 219 PII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRS 272 +R G AL++ S K K ++ I +G Sbjct: 255 KEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIP 312 Query: 273 HVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDP 332 VV + + I G D+ KIG ++ ++ + E A+D Sbjct: 313 AVVVEKDAVFIPAGWDNDKKIGILHENFQTLKIEDNFEDIITKPPVRKFVHEKEIMAEDD 372 Query: 333 GFKELVIDEIRS 344 + + + + Sbjct: 373 QVFLMKLQSLLA 384 >gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|55726458|emb|CAH89998.1| hypothetical protein [Pongo pygmaeus] Length = 492 Score = 299 bits (766), Expect = 2e-79, Method: Composition-based stats. Identities = 68/364 (18%), Positives = 114/364 (31%), Gaps = 46/364 (12%) Query: 18 FVKRTEGGESATPS-IQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINK 76 G ++ Q + + + + P + ILV G GKTT + K Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSIL---SEVSTRAGSKLPSGKNILVFGEDGSGKTTLMTK 73 Query: 77 FFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQL 135 EH + LEY + + NVW L + LL+ + L + Sbjct: 74 -LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPET 131 Query: 136 AVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ----- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 132 LVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPEE 189 Query: 191 ------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII----- 221 D+ L PV++V K D S + Sbjct: 190 GCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDE 249 Query: 222 -RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP 280 LR G AL++ S K K +L I H +G H +V + Sbjct: 250 HLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKDA 307 Query: 281 LCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVID 340 + I G D+ KI + ++ + + A+D + Sbjct: 308 VFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQQ 367 Query: 341 EIRS 344 + + Sbjct: 368 SLLA 371 >gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculus] gi|74183685|dbj|BAE24463.1| unnamed protein product [Mus musculus] gi|74190862|dbj|BAE28215.1| unnamed protein product [Mus musculus] gi|74212500|dbj|BAE30992.1| unnamed protein product [Mus musculus] Length = 492 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 118/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] Length = 341 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 101/329 (30%), Positives = 170/329 (51%), Gaps = 17/329 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA ++++ E+++ +GSK GKTT I + DR + + +P Sbjct: 2 PSETLWEIAKAEVQKRRSHGSEGDGAEIGEKSLFFIGSKNGGKTTIILRCLDR-DESAKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W+ +E + + +++ K+ + + + QR V + + D E +DP P P Sbjct: 121 NDHWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS +IG + ++ A ME+ + +K Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIR 343 LK DPA+DP + E +DE+R Sbjct: 298 PPKSTGTLKAVQDPARDPQYAESEVDEMR 326 >gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light intermediate chain 2 isoform 3 [Bos taurus] Length = 492 Score = 299 bits (765), Expect = 3e-79, Method: Composition-based stats. Identities = 73/365 (20%), Positives = 117/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEEMRELERKFVKDFQDYVEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V E Sbjct: 249 EHFDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKE 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] gi|73919261|sp|Q9QXU8|DC1L1_RAT Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|6651427|gb|AAF22294.1|AF181992_1 dynein light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 68/372 (18%), Positives = 123/372 (33%), Gaps = 50/372 (13%) Query: 10 LHQRLQKMFVKRTEGGESATPSIQDIAGRLA-EEQQRLRQLEATTTPKERTILVLGSKCV 68 L L G Q++ R+ E R R + P + +L+LG Sbjct: 26 LANELASGSGGPAAGD---DEDGQNLWSRILREVSTRSR----SKLPTGKNVLLLGEDGA 78 Query: 69 GKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPM 127 GKT+ I + E + LEY + + Q NVW L + LL+ + Sbjct: 79 GKTSLIRR-IQGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSL 136 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERV 187 L+ V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ + Sbjct: 137 DALSLRDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKL--KIPPEEMKEMEQKLIRDF 194 Query: 188 GQQNKDSEK-----------------------------LDPLPFPVIIVGGKYDVFSGFD 218 + + E L PV++V K D S + Sbjct: 195 QEYVEPGEDFPASPQRRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVLE 254 Query: 219 PII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRS 272 +R G AL++ S K K ++ I +G Sbjct: 255 KEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIP 312 Query: 273 HVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDP 332 VV + + I G D+ KIG ++ ++ + E A+D Sbjct: 313 AVVVEKDAVFIPAGWDNDKKIGILHENFQTLKIEDNFEDIITKPPVRKFVHEKEIMAEDD 372 Query: 333 GFKELVIDEIRS 344 + + + + Sbjct: 373 QVFLMKLQSLLA 384 >gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] gi|73919263|sp|Q6PDL0|DC1L2_MOUSE Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|35193080|gb|AAH58645.1| Dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] Length = 492 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 118/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKKLAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin light chain A [Monodelphis domestica] Length = 520 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 71/359 (19%), Positives = 124/359 (34%), Gaps = 46/359 (12%) Query: 24 GGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 G ++ Q++ L+E R R + P + +L+LG GKT+ I + R E Sbjct: 32 GDKAEEDDGQNLWSCILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGRIQGRPE 87 Query: 83 HATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 + EY + + Q NVW L + LL+ M + L+ VIL++ Sbjct: 88 ECKKGR-GAEYLYLSVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMEANSLRDTLVILVV 146 Query: 142 DLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ----------- 190 D+S+P L+ +R+ ++ K+ PE + +EQ+ + + Sbjct: 147 DMSKPWTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLIRDFQEYVEPGEDFPASP 204 Query: 191 ---------NKDSEK--------LDPLPFPVIIVGGKYDVFSGFDPII------RKHTCR 227 DS L PV++V K D S + Sbjct: 205 QRRSTLQEDKDDSVMLPLGADTLTYNLGVPVLVVCTKCDAISVLEKEHDYKDEHFDFIQS 264 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G P VV + + I G Sbjct: 265 HIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPF--KIPAVVVEKDAVFIPAGW 322 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 D+ KIG ++ ++ + E A+D + + Q Sbjct: 323 DNDKKIGILHENFQTLKAEDSFEDIITKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 381 >gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Homo sapiens] Length = 492 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 117/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light intermediate chain 2, cytosolic (LIC53/55) (LIC-2) [Canis familiaris] Length = 481 Score = 298 bits (764), Expect = 4e-79, Method: Composition-based stats. Identities = 73/374 (19%), Positives = 124/374 (33%), Gaps = 52/374 (13%) Query: 7 FHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK 66 F H++ + ++R +++ + L+E R R + P + ILV G Sbjct: 3 FLQTHEQTRVFCLRRQGT------TLRFWSSILSEVSTRAR----SKLPSGKNILVFGED 52 Query: 67 CVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEV 125 GKTT + K EH + LEY + + NVW L + LL+ Sbjct: 53 GSGKTTLMTK-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKF 110 Query: 126 PMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVE 185 + L + VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 111 AVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEEMRELERKFVK 168 Query: 186 RVGQQ-----------------------------NKDSEKLDPLPFPVIIVGGKYDVFSG 216 D+ L PV++V K D S Sbjct: 169 DFQDYIEPEEGCQGSPQRRGPLTSGPDEENVALPLGDNMLTHNLGIPVLVVCTKCDAVSV 228 Query: 217 FDPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 + LR G AL++ S K K +L I H +G H Sbjct: 229 LEKEHDYRDEHFDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFV 286 Query: 271 RSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAK 330 +V + + I G D+ KI + ++ + + A+ Sbjct: 287 TPALVVEKDAVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAE 346 Query: 331 DPGFKELVIDEIRS 344 D + + + Sbjct: 347 DEQVFLMKQQSLLA 360 >gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Homo sapiens] gi|3287825|sp|O43237|DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|2665836|gb|AAB88513.1| dynein light intermediate chain 2 [Homo sapiens] gi|119603445|gb|EAW83039.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|119603446|gb|EAW83040.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|158256964|dbj|BAF84455.1| unnamed protein product [Homo sapiens] Length = 492 Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 117/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] Length = 492 Score = 297 bits (762), Expect = 6e-79, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 118/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKDFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Rattus norvegicus] gi|2494218|sp|Q62698|DC1L2_RAT Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|619665|gb|AAA80334.1| LIC-2 gi|149032345|gb|EDL87236.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_b [Rattus norvegicus] Length = 497 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 117/362 (32%), Gaps = 48/362 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKDFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DE 341 E Sbjct: 367 QE 368 >gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light chain-A [Canis familiaris] Length = 524 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 120/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R + P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAISLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK--------- 196 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 155 PWTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 197 --------------------LDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TGSQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG ++ ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIVAEDDQVFLMKLQSLLA 384 >gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|67970473|dbj|BAE01579.1| unnamed protein product [Macaca fascicularis] Length = 492 Score = 297 bits (760), Expect = 1e-78, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 118/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P ++ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKSILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] Length = 318 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 101/317 (31%), Positives = 161/317 (50%), Gaps = 17/317 (5%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGK 103 E+++ +GSK GKTT I + DR + +PTLALEY++GRR Sbjct: 2 GINGSEGDGAEFAEKSVFFIGSKNGGKTTIILRCLDR-DEPPKPTLALEYTYGRRAKGHN 60 Query: 104 S-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 + + + WELG + L+ +P+ L+ +++L+LDLS+P W +E + + Sbjct: 61 TPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKS 120 Query: 163 TAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDP 219 +++ K+ + + Q+ + + + D E +DP P P++I+G KYDVF F+ Sbjct: 121 HVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQDFES 180 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 RK C+ LR +AH G +L+F S+ L K LR I L FG +S VD N+ Sbjct: 181 EKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-LRGVINQLAFGIDKS--KSICVDQNK 237 Query: 280 PLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAK 330 PL I G DS+ +IG + ++ A ME+ + EK LK+ DPA+ Sbjct: 238 PLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPAR 297 Query: 331 DPGFKELVIDEIRSQKN 347 DP + E +DE+R QK+ Sbjct: 298 DPQYAENEVDEMRIQKD 314 >gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A isoform 2 [Pan troglodytes] gi|134047749|sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|119584837|gb|EAW64433.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_c [Homo sapiens] gi|124297735|gb|AAI31621.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] Length = 523 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 120/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R + P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK--------- 196 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 155 PWTALDSLQKWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 197 --------------------LDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG ++ ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 384 >gi|157119433|ref|XP_001653379.1| conserved hypothetical protein [Aedes aegypti] gi|108883162|gb|EAT47387.1| conserved hypothetical protein [Aedes aegypti] Length = 347 Score = 295 bits (756), Expect = 3e-78, Method: Composition-based stats. Identities = 174/348 (50%), Positives = 235/348 (67%), Gaps = 10/348 (2%) Query: 22 TEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDRE 81 + T +IQDIA +L E + T P ERTI VLGSK GK+T IN+F DR+ Sbjct: 8 SSMEPDTTETIQDIAMKLVTEHMKQES-SLTGGPTERTIFVLGSKGAGKSTLINRFLDRD 66 Query: 82 EHATRPTLALEYSFGRRIGSGKS--PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 + TRPTLALEYSFGRR SG+ + NVWELGSL N+ QL+EVP+R+HGL A ++ Sbjct: 67 DI-TRPTLALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAAFAAVI 125 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDP 199 +LDLSQP R WTDL+C GL+ + +P+ +++R ++VG ++D L+ Sbjct: 126 VLDLSQPDRLWTDLQCILNGLKQAISK---NCSPKEVSEMQERMKQKVGLDHEDLNTLEI 182 Query: 200 LPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIC 259 LPFPVIIVGGKYD F D I+KH CRCLRS++H IG AL+FY+ K L+K++RD + Sbjct: 183 LPFPVIIVGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRDAMN 242 Query: 260 HLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEK 319 HLGFGSP++PF++ +D N P+ + FG DSW KIG T S ERIG ++ ++PQ+ EK Sbjct: 243 HLGFGSPSNPFKATALDHNGPIVVPFGGDSWEKIGVTPTNS-ERIGMSYSAQIPQVGTEK 301 Query: 320 QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQ 367 + + DPAKD GFKE VIDE+R+QK++EL L++D +R KFE+VQ Sbjct: 302 VSIPD--DPAKDGGFKERVIDELRAQKDDELMRLLKDTEMRMKFEAVQ 347 >gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 120/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R + P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK--------- 196 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 155 PWTALDSLQKWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 197 --------------------LDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG ++ ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 384 >gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein light intermediate chain 2 [Monodelphis domestica] Length = 493 Score = 294 bits (753), Expect = 7e-78, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 119/357 (33%), Gaps = 48/357 (13%) Query: 27 SATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ L+E R R + P + ILV G GKTT + K EH+ Sbjct: 27 NEEDEGQNLWSSILSEVSTRSR----SKLPSGKNILVFGEDGSGKTTLLAK-LQGAEHSK 81 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + + NVW L + LL+ + LQ+ VI + D+S Sbjct: 82 KGR-GLEYLYLNIHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAETLQETLVIFVADMS 140 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ-------------- 190 +P L+ LR+ +M K+ PE +EQ+ V+ + Sbjct: 141 RPWTVMESLQKWASVLREHIDKM--KIPPEEMRDMEQKFVKDFQEYVEPEEGYQGSPQRR 198 Query: 191 ---------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCL 229 D+ L PV++V K D S + + Sbjct: 199 GPLASAQDGENVILPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHV 258 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R G AL++ S K K +L I H +G H +V + + I G D+ Sbjct: 259 RKFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKDAVFIPAGWDN 316 Query: 290 WSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 KI + ++ + + A+D + + Q Sbjct: 317 EKKIAILHENFTTVKPDDPYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQQSFLAKQ 373 >gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 294 bits (752), Expect = 9e-78, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 114/354 (32%), Gaps = 44/354 (12%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ + + ++ P + +L+ G GKTT ++K EH Sbjct: 22 SNEDDEGQNLWSSIL---SEVSTRSSSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNK 77 Query: 86 RPTLALEYSFGRRIGSG-KSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + +VW L + LL+ + L+ + ++D+S Sbjct: 78 KGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMS 136 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK------------ 192 +P L+ LR+ ++ ++ PE +EQR V+ + + Sbjct: 137 RPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRR 194 Query: 193 ----------------DSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 D+ L P++IV K D + + +R Sbjct: 195 APAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIR 254 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G L++ S K K +L + H + +V + + I G D+ Sbjct: 255 RFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSS--PALVVEKDAVFIPSGWDND 312 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG + ++ + + A+D + + + Sbjct: 313 KKIGILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQVFLMKQQSLLA 366 >gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] gi|5531813|gb|AAD44481.1| dynein light chain-A [Homo sapiens] Length = 523 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 120/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R + P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK--------- 196 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 155 PWTALDSLQKWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 197 --------------------LDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG ++ ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 384 >gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 [Bos taurus] gi|86438315|gb|AAI12622.1| Similar to Dynein light intermediate chain 1, cytosolic (Dynein light chain A) (DLC-A) [Bos taurus] Length = 524 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 66/354 (18%), Positives = 120/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R + P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDPYHKGLLKFSLDAISLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK--------- 196 P L+ +R+ ++ K+ PE + +EQ+ V + + E Sbjct: 155 PWTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQRRS 212 Query: 197 --------------------LDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TASQEDRDDSVLLPLGADTLTQNLGVPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLQYGAALIYASVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG ++ ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 384 >gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] gi|62531080|gb|AAH93336.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 56/354 (15%), Positives = 114/354 (32%), Gaps = 44/354 (12%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ + + ++ P + +L+ G GKTT ++K EH Sbjct: 22 SNEDDEGQNLWSSIL---SEVSTRSSSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNK 77 Query: 86 RPTLALEYSFGRRIGSG-KSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + +VW L + LL+ + L+ + ++D+S Sbjct: 78 KGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMS 136 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK------------ 192 +P L+ LR+ ++ ++ PE +EQR V+ + + Sbjct: 137 RPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRR 194 Query: 193 ----------------DSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 D+ L P++IV K D + + +R Sbjct: 195 APAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIR 254 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G L++ S K K +L + H + +V + + I G D+ Sbjct: 255 RFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSS--PALVVEKDAVLIPSGWDND 312 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG + ++ + + A+D + + + Sbjct: 313 KKIGILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQVFLMKQQSLLA 366 >gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella vectensis] gi|156226126|gb|EDO46938.1| predicted protein [Nematostella vectensis] Length = 366 Score = 292 bits (747), Expect = 4e-77, Method: Composition-based stats. Identities = 107/356 (30%), Positives = 179/356 (50%), Gaps = 20/356 (5%) Query: 24 GGESATPSIQDIAGR----LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD 79 G + + +I D+A L E ++ E++ +E I ++GSK GKT+ + +F D Sbjct: 2 GDKRSDKTIWDLAIEERDYLLNEAKKKGTQESSPHGEEAGIFLIGSKNAGKTSMVLRFLD 61 Query: 80 REEHATRPTLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 R+E +PT AL+Y+FGR+ + V ++WELG +L+++P+ ++ L++I Sbjct: 62 RDEVP-KPTTALDYTFGRKAKGHNIAKDVGHIWELGGGTFLSKLIDIPINVDSVRGLSII 120 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSE 195 + LDLS P W +E ++ ++M+++ P + L E+ G + D Sbjct: 121 IFLDLSLPNELWHTMETLLNQVKKRVHKVMDELAAKNPSAVQKLRNDAWEKFGTDHPDKS 180 Query: 196 KLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLR 255 ++P P P+ IVGGKYD++ FDP RK R LR +AH G L F+S K L R Sbjct: 181 FVEPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGRSR 240 Query: 256 DTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ--SVERIGATFGMEVP 313 I HL F + ++ VD N+P+ + G DS ++IG + R+ + ++ Sbjct: 241 GMIGHLLFHT--SLGKAIGVDHNKPIIVSAGQDSLAQIGAPPVASEDLGRLQSRNPYDLW 298 Query: 314 QL------QLEKQKLK-ETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + EK K + DP+KDP + E +D +R QK+EEL R + + Sbjct: 299 KAAYATFFPPEKSKQHSDREDPSKDPQYFEAAVDAMRKQKDEELDRYRRQAERKAR 354 >gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 291 bits (746), Expect = 4e-77, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 119/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R + P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK--------- 196 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 155 PWTALDSLQKWASVVREHVDKL--KIPPEEMKQIEQKLIRDFQEYVEPGEDFPASPQGRN 212 Query: 197 --------------------LDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG + ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEGIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 384 >gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Danio rerio] gi|32766386|gb|AAH55198.1| Zgc:63673 [Danio rerio] Length = 358 Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats. Identities = 112/355 (31%), Positives = 178/355 (50%), Gaps = 19/355 (5%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTT-----PKERTILVLGSKCVGKTTAINKFF 78 + ++ ++ DIA ++ E P +RT+ +GSK GKTT + +F Sbjct: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 Query: 79 DREEHATRPTLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAV 137 +R + +PTLALEY+FGRR + + ++WELG + L+++P+ + L+V Sbjct: 61 ER-DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 Query: 138 ILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERV-GQQNKDSEK 196 +L+LDLS+P W +E R+ +++ + ++ V RV + D E Sbjct: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 Query: 197 LDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRD 256 + P P P++IVG K+D+F FD RK C+ LR +AH G +L+F S K R Sbjct: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 Query: 257 TICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQ 314 I L FG+ +S D ++PL I G+DS S+IG A V+ + A ++ + Sbjct: 240 FINQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 Query: 315 LQLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 EK ++ KE DP KDP F E +ID IR+QK++EL R+ K Sbjct: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 >gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [Danio rerio] Length = 500 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 55/354 (15%), Positives = 113/354 (31%), Gaps = 44/354 (12%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ + + ++ P + +L+ G GKTT ++K EH Sbjct: 22 SNEDDEGQNLWSSIL---SEVSTRSSSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNK 77 Query: 86 RPTLALEYSFGRRIGSG-KSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + +VW L + LL+ + L+ + ++D+S Sbjct: 78 KGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMS 136 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK------------ 192 +P L+ LR+ ++ ++ PE +EQR V+ + + Sbjct: 137 RPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRR 194 Query: 193 ----------------DSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 D+ L P++IV K D + + +R Sbjct: 195 APAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIR 254 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G L++ S K K +L + H + +V + + I G D+ Sbjct: 255 RFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSS--PALVVEKDAVFIPSGWDND 312 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KI + ++ + + A+D + + + Sbjct: 313 KKICILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQVFLMKQQSLLA 366 >gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae str. PEST] gi|116118470|gb|EAA13896.3| AGAP010165-PA [Anopheles gambiae str. PEST] Length = 339 Score = 288 bits (737), Expect = 5e-76, Method: Composition-based stats. Identities = 176/343 (51%), Positives = 234/343 (68%), Gaps = 9/343 (2%) Query: 27 SATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 T +IQDIA +L EQ R AT TP ERT+ VLGSK VGK+T IN+F DR++ R Sbjct: 4 DTTETIQDIAIKLVTEQLRNESRLAT-TPTERTLFVLGSKGVGKSTLINRFLDRDDVP-R 61 Query: 87 PTLALEYSFGRRIGSGKS--PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 PTLALEYSFGR+ SG+ + NVWELGSL N+ QL+E+P+R+HGLQ + I+MLDLS Sbjct: 62 PTLALEYSFGRKTASGQGAQKNICNVWELGSLANSSQLIEMPIRSHGLQTFSCIVMLDLS 121 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPV 204 QP R WTDLE GL+ + E +++ T +R+G+++ D L+ PFP+ Sbjct: 122 QPDRLWTDLESVLNGLKQATAK---HAVAGQIEEMKELTAQRIGKEHPDLSTLELFPFPI 178 Query: 205 IIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 +IVGGKYD++ D IRKH CRCLRS+AH +G AL++YS K L+K++RDT+ HLGFG Sbjct: 179 VIVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRDTMNHLGFG 238 Query: 265 SPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 SP++PFR+ D + PL I FG DSW++IG T + S ERIG +F ++PQL + + Sbjct: 239 SPSNPFRAASFDHSSPLAIPFGADSWARIGVTPSNS-ERIGLSFSTQIPQLPIGNGGIL- 296 Query: 325 TTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQ 367 DPAKD GFKE IDE+RSQK+EEL +++D +R KFE VQ Sbjct: 297 PDDPAKDAGFKEASIDELRSQKDEELMYVLKDTEIRMKFEVVQ 339 >gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Xenopus laevis] gi|112419317|gb|AAI22489.1| MGC154222 protein [Xenopus laevis] Length = 487 Score = 287 bits (734), Expect = 1e-75, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 116/362 (32%), Gaps = 48/362 (13%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 T G Q + L++ R + P + ILV G GKTT + K Sbjct: 15 TPGAGDEEDEGQSLWSSILSDVSTSAR----SKLPSGKNILVFGEDGSGKTTLMAK-LQG 69 Query: 81 EEHATRPTLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 EH + LEY + + NVW L + LL+ + + + + Sbjct: 70 AEHNKKGR-GLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESISETVAVF 128 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------- 190 + D+S+P L LR+ ++ K+ PE LEQ+ ++ + Sbjct: 129 VGDMSRPWTIMESLLKWASVLREHIDKL--KIPPEEMRELEQKIIKDFQEYVEPEEALSG 186 Query: 191 --------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKH 224 D+ L PV++V K D S + Sbjct: 187 SPQRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDF 246 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 +R G AL++ S K K +L I H + H R+ +V + + I Sbjct: 247 IQSHIRKFCLQYGSALIYTSVKEEKNLDLLYKYIVHKTYN--FHFNRAAMVVEKDSVFIP 304 Query: 285 FGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IR 343 G D+ KIG + ++ + + A+D + + Sbjct: 305 AGWDNEKKIGILHENFSTVKPEDAYEDFIVKPPVRKLVHDKEVAAEDEQVFLMKQQSYLA 364 Query: 344 SQ 345 Q Sbjct: 365 KQ 366 >gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-intermediate chain [Xenopus laevis] gi|28280005|gb|AAH45030.1| Dnclic1-prov protein [Xenopus laevis] Length = 508 Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 66/359 (18%), Positives = 117/359 (32%), Gaps = 43/359 (11%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + S Q++ L+E R R + P + +L+LG GKT+ I K Sbjct: 25 SGATASEDEDGQNLWSSILSEVSTRSR----SKLPFGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ M ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDDDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEK----------VTPELREILE--------- 180 ++D+S+P L+ +R+ ++ + +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKLKIPPEEMREMEERIVRHFQEYVEPGDELPTSP 198 Query: 181 QRTVERVGQ-------QNKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCR 227 QR + D L PV++V K D S + Sbjct: 199 QRRNTSSDECDDSVILPLADDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G VV + + I G Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYG--FQFKMPAVVVEKDAVFIPAGW 316 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 D+ KIG +V ++ + E A+D + + Q Sbjct: 317 DNDKKIGILHENFQTLKPEDTFEDVITKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 375 >gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 [Xenopus tropicalis] gi|111305599|gb|AAI21354.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Xenopus tropicalis] Length = 508 Score = 284 bits (728), Expect = 5e-75, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 119/359 (33%), Gaps = 43/359 (11%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + S Q++ L+E R R + P + +L+LG GKT+ I K Sbjct: 25 SGATASEDEDGQNLWSSILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ M ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEK----------VTPELREILE--------- 180 ++D+S+P L+ +R+ ++ + +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKLKIPPEEMKEMEEKIVRNFQEYVEPGEEFPASP 198 Query: 181 -QRTVERVGQQN------KDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCR 227 +R Q + + L PV++V K D S + Sbjct: 199 QKRNTSSDEQDDSVILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G + VV + + I G Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFLFNM--PAVVVEKDAVFIPAGW 316 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 D+ KIG ++ ++ + E A+D + + Q Sbjct: 317 DNDKKIGILHENFQTLKPEDTFEDIITKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 375 >gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibenclamide-sensitive voltage-gated potassium channel, partial [Ornithorhynchus anatinus] Length = 449 Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 161/329 (48%), Gaps = 19/329 (5%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++++ E+++ +GSK GKTT I + DR + RPTL Sbjct: 1 ETLWEIARAEVEKKEK----PGGGDEGEKSVFFVGSKNGGKTTIILRCLDR-DEPARPTL 55 Query: 90 ALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY+FGRR + + + WELG + L +P+ L+ A + LDLS+P Sbjct: 56 ALEYTFGRRARGHNTPKDIAHFWELGGGTSLLDLARIPITADSLRTFATDIFLDLSRPSE 115 Query: 149 FWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVG 208 W E + +R + + + P R RT V + + D E +DP P P++I+G Sbjct: 116 LWLTAEHLLRAVRTHVENLGQ---PGTRAAATPRTWSPVPEDHPDREFIDPFPIPLVIIG 172 Query: 209 GKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAH 268 KYDVF D RK CR LR +AH G L+F + L K R I HL FG Sbjct: 173 SKYDVFQNLDSEKRKVICRTLRFLAHHHGATLMFTGKSEALLLK-TRSVISHLAFGVGVD 231 Query: 269 PFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QSVERIGATFGMEVPQLQLE-------K 319 ++ +D N+PL I G DS+S+IG + + ++ +E+ + K Sbjct: 232 RSKALTLDQNKPLFIPAGLDSFSQIGPPPSAAGDIGKLRVQTPLELWKEVYNKAFPLQTK 291 Query: 320 QKLKETTDPAKDPGFKELVIDEIRSQKNE 348 K+ DP +DP + E +D +R+QK++ Sbjct: 292 SDRKDLKDPGRDPQYAEREVDAMRAQKDQ 320 >gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Gallus gallus] gi|53126839|emb|CAG30989.1| hypothetical protein [Gallus gallus] Length = 488 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 117/356 (32%), Gaps = 47/356 (13%) Query: 27 SATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 S Q++ L+E R R + P + ILV G GKTT + K EH Sbjct: 23 SEEEEGQNLWSSILSEVSTRSR----SKLPSGKNILVFGDDGSGKTTLMAK-IQGAEHGK 77 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + + Q NVW L + LL+ + LQ V+ + D+S Sbjct: 78 KGR-GLEYLYLNIHDEDRDDQTRCNVWILDGDLYNKGLLKFAVSAESLQDTIVVFVADMS 136 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ-------------- 190 +P L+ L++ ++ K+ PE +EQ+ ++ + Sbjct: 137 RPWTVMESLQKWASVLQEHIDKL--KIPPEEMRDMEQKFIKEFQEYVEPEEGYQGSPQRR 194 Query: 191 --------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 ++ L PV++V K D S + +R Sbjct: 195 GPSSGQEDESVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHIR 254 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K +L I H +G +V + + I G D+ Sbjct: 255 RFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FQFTTPALVVEKDAVFIPAGWDNE 312 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 KI + ++ + + A+D + + Q Sbjct: 313 KKIAILHENFTTVKPDDAYEDFIAKPPVRKLVHDKELAAEDEQVFLMKQQSFLAKQ 368 >gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] gi|11992258|gb|AAG42486.1|AF317841_1 cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] Length = 508 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 119/359 (33%), Gaps = 43/359 (11%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + S Q++ L+E R R + P + +L+LG GKT+ I K Sbjct: 25 SGDTASEDEDGQNLWSSILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMME----------KVTPELREILE--------- 180 ++D+S+P L+ +R+ ++ K+ +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 181 QRTVERVGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCR 227 QR +++ + L PV++V K D S + Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G VV + + I G Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYG--FQFNMPAVVVEKDAVFIPAGW 316 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 D+ KIG ++ ++ + E A+D + + Q Sbjct: 317 DNDKKIGILHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 375 >gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic, light intermediate polypeptide 2 [Macaca mulatta] Length = 497 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 73/370 (19%), Positives = 120/370 (32%), Gaps = 53/370 (14%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGK-------YDVFSGFD 218 D+ L PV++V K + SG + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKVRARGLLAWLGSGSE 248 Query: 219 PIIRK----HTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 R+ LR G AL++ S K K +L I H +G H + Sbjct: 249 HAFREKNVRIFDSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPAL 306 Query: 275 VDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGF 334 V + + I G D+ KI + ++ + + A+D Sbjct: 307 VVEKDAVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQV 366 Query: 335 KELVIDEIRS 344 + + + Sbjct: 367 FLMKQQSLLA 376 >gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] Length = 480 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 66/362 (18%), Positives = 114/362 (31%), Gaps = 50/362 (13%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 G Q + L++ R + P + ILV G GKTT + K Sbjct: 10 ALGAGGEEDEGQSLWSSILSDVSTSAR----SKLPSGKNILVFGEDGSGKTTLVAK-LQG 64 Query: 81 EEHATRPTLALEYSFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 EH + LEY + + NVW L + LL+ + + + + Sbjct: 65 AEHNKKGR-GLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESIGETVAVF 123 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------- 190 + D+S+P L LR+ ++ K+ PE LEQ+ ++ + Sbjct: 124 VGDMSRPWTIMESLLKWASVLREHIDKL--KIPPEEIRELEQKIIKDFQEYVEPEDALSG 181 Query: 191 --------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKH 224 D+ L PV++V K D S + Sbjct: 182 SPQRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDF 241 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 +R G AL++ S K K +L I H + H + +V + + I Sbjct: 242 IQSHIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYN--FHFNCAAMVVEKDSVFIP 299 Query: 285 FGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IR 343 G D+ KIG + ++ + + A+D + + Sbjct: 300 AGWDNEKKIGILHENF--SKPEDAYEDFIVKPPVRKLVHDKEVAAEDEQVFLMKQQSYLA 357 Query: 344 SQ 345 Q Sbjct: 358 KQ 359 >gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] Length = 508 Score = 281 bits (719), Expect = 6e-74, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 119/359 (33%), Gaps = 43/359 (11%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + S Q++ L+E R R + P + +L+LG GKT+ I K Sbjct: 25 SGDTASEDEDGQNLWSSILSEVSTRSR----SKLPSGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMME----------KVTPELREILE--------- 180 ++D+S+P L+ +R+ ++ K+ +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 181 QRTVERVGQQNK-------DSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCR 227 QR +++ + L PV++V K D S + Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G VV + + I G Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYG--FQFNMPAVVVEKDAVFIPAGW 316 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 D+ KIG ++ ++ + E A+D + + Q Sbjct: 317 DNDRKIGILHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 375 >gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light chain A [Gallus gallus] gi|2494217|sp|Q90828|DC1L1_CHICK Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) (LIC57/59) gi|510249|emb|CAA55698.1| dyenin light chain A [Gallus sp.] Length = 515 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 67/358 (18%), Positives = 122/358 (34%), Gaps = 48/358 (13%) Query: 26 ESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 Q++ L+E R R + P +++L+LG GKT+ I K E Sbjct: 29 GGEEDDGQNLWSCILSEVSTRSR----SKLPSGKSVLLLGEDGAGKTSLIGK-IQGIEEY 83 Query: 85 TRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 + +EY + + Q NV L + LL+ M + L+ ++L++D+ Sbjct: 84 KKGR-GMEYLYLNVHDEDRDDQTRCNVRILDGDLYHKGLLKFAMEANSLKDTLIMLVVDM 142 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK------- 196 S+P L+ +R+ ++ K+ PE + +EQ+ V + + E Sbjct: 143 SRPWTAMDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQR 200 Query: 197 ----------------------LDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRC 228 L PV++V K D S + Sbjct: 201 RNTSLQEDKDDSVILPLGADTLTCNLGIPVVVVCTKCDAISVLEKEHDYRDEHFDFIQSH 260 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 +R G AL++ S K K ++ I +G P + VV + + I G D Sbjct: 261 IRRFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFN--VPAVVVEKDAVFIPAGWD 318 Query: 289 SWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 + KIG + + ++ + E A+D + + Q Sbjct: 319 NDKKIGILHENFQTLKAEDSFEDSIRKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 376 >gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon nigroviridis] Length = 463 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 111/343 (32%), Gaps = 44/343 (12%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L++ R ++ P + ILV G GKTT + K + EH + LEY + Sbjct: 1 SSILSDVSTRS----SSKLPSGKNILVFGEDGSGKTTLMAK-LEGAEHNKKGR-GLEYLY 54 Query: 96 GRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + NVW L + LL+ + L + ++D+S+P L+ Sbjct: 55 LSVHDEDRDDLTRCNVWILDGDLYHKGLLKFAVSAKSLSDCLAVFVVDMSRPWIIMDSLQ 114 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------------------ 190 LRD ++ K+ P++ +EQ+ V+ + Sbjct: 115 KWSSVLRDHLDKL--KIEPDVMREMEQKMVKAFQEYSEPEDANSSSPQRRAPTAGEDEAV 172 Query: 191 ---NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGGALL 241 ++ L PV++V K D S + +R G L Sbjct: 173 VLPLGENTLTHNLGIPVLVVCTKCDAVSVLEKEHDYKEEHFDFIQSHIRKFCLQYGAGLF 232 Query: 242 FYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSV 301 + S K K +L I H + +V + + I G D+ KI Sbjct: 233 YTSVKEEKNLDLLYKYIVHKLYD--FQFTTPALVVEKDAVFIPSGWDNEKKIAILHENLS 290 Query: 302 ERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 + ++ + E A+D + + + Sbjct: 291 TVRPEDPFEDFIAKPPVRKLVHEKEINAEDEQVFLMKQQSLLA 333 >gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 274 bits (700), Expect = 8e-72, Method: Composition-based stats. Identities = 92/355 (25%), Positives = 158/355 (44%), Gaps = 18/355 (5%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEH 83 + ++ ++ D+A ++ ERT+ ++GSK GKT+ + K DR + Sbjct: 1 MPKISSDTLWDLAAAEVNSRESEDDYGERNVAVERTVFLMGSKAGGKTSILLKCLDR-DE 59 Query: 84 ATRPTLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLD 142 ++PTLALEY+FGRR + + ++WELG L+++P+ + L+ L+VIL++D Sbjct: 60 PSKPTLALEYTFGRRARGHNTPKDIAHIWELGGGTFLSDLVQIPITSADLKFLSVILIVD 119 Query: 143 LSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQ-------QNKDSE 195 LS+P W E + + ++ D E Sbjct: 120 LSKPNELWGTTEKLLQVTQAHLEKAFSMAQKAQTAKPAATHQTATQSAARVLPADYPDRE 179 Query: 196 KLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLR 255 + P P++IVG KYD+F FD +K + LR +AH +L+ Q Sbjct: 180 LISAFPVPLLIVGSKYDIFQEFDSDKKKLIAQMLRFVAHSYAASLIVIHQXXXXXXXXXX 239 Query: 256 DTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVP 313 ++ +D +PL I G+DS+S+IG A V+ + A ++ Sbjct: 240 XX-XXXXXXXXXXXXKTVSMDLTKPLIIPAGSDSFSQIGSPCAADVDIASLHARNPKDLW 298 Query: 314 QL------QLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + EK+ ++ DPAKDP + E ID +R+QK++EL R+ + Sbjct: 299 RKVCGCVFPPEKEHQQDLKDPAKDPQYSEPQIDAMRAQKDQELEQYKRNAAKTWQ 353 >gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632687|emb|CAM56700.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 489 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 118/360 (32%), Gaps = 44/360 (12%) Query: 17 MFVKRTEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 + +E Q++ L+E R R + P + ++V+G GKTT + Sbjct: 14 VNNSTSESQNPEEEDGQNLWSSILSEVSTRSR----SKLPSGKNVVVMGEVGSGKTTLVA 69 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K E + LEY + Q N W L + L + + L+ Sbjct: 70 K-LQGVEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLED 127 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 ++ ++DLS+P L+ +RD ++ +V PE LE R ++ + Sbjct: 128 SLILFVVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPG 185 Query: 191 ----------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------R 222 ++ L P+++V K D S + Sbjct: 186 SDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHL 245 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 +R G ALL+ S K K +L + H +G P + V + + Sbjct: 246 DFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS--PAQVVEKDSVF 303 Query: 283 IWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEI 342 I G D+ KI +V ++ + E A+D + + + Sbjct: 304 IPSGWDNEKKIAILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQVFLVKLQSL 363 >gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] Length = 485 Score = 272 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 118/360 (32%), Gaps = 44/360 (12%) Query: 17 MFVKRTEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 + +E Q++ L+E R R + P + ++V+G GKTT + Sbjct: 10 VNNSTSESQNPEEEDGQNLWSSILSEVSTRSR----SKLPSGKNVVVMGEVGSGKTTLVA 65 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K E + LEY + Q N W L + L + + L+ Sbjct: 66 K-LQGVEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLED 123 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 ++ ++DLS+P L+ +RD ++ +V PE LE R ++ + Sbjct: 124 SLILFVVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPG 181 Query: 191 ----------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------R 222 ++ L P+++V K D S + Sbjct: 182 SDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHL 241 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 +R G ALL+ S K K +L + H +G P + V + + Sbjct: 242 DFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS--PAQVVEKDSVF 299 Query: 283 IWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEI 342 I G D+ KI +V ++ + E A+D + + + Sbjct: 300 IPSGWDNEKKIAILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQVFLVKLQSL 359 >gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light intermediate chain 1 [Danio rerio] gi|94733316|emb|CAK11123.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632686|emb|CAM56699.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 501 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 65/360 (18%), Positives = 118/360 (32%), Gaps = 44/360 (12%) Query: 17 MFVKRTEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 + +E Q++ L+E R R + P + ++V+G GKTT + Sbjct: 16 VNNSTSESQNPEEEDGQNLWSSILSEVSTRSR----SKLPSGKNVVVMGEVGSGKTTLVA 71 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K E + LEY + Q N W L + L + + L+ Sbjct: 72 K-LQGVEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLED 129 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 ++ ++DLS+P L+ +RD ++ +V PE LE R ++ + Sbjct: 130 SLILFVVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPG 187 Query: 191 ----------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------R 222 ++ L P+++V K D S + Sbjct: 188 SDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHL 247 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 +R G ALL+ S K K +L + H +G P + V + + Sbjct: 248 DFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS--PAQVVEKDSVF 305 Query: 283 IWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEI 342 I G D+ KI +V ++ + E A+D + + + Sbjct: 306 IPSGWDNEKKIAILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQVFLVKLQSL 365 >gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A isoform 1 [Pan troglodytes] Length = 472 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 63/346 (18%), Positives = 113/346 (32%), Gaps = 49/346 (14%) Query: 35 IAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYS 94 +AGR E + T P G GKT+ I + E + LEY Sbjct: 1 MAGREGEHETLDPGPAGTRPPS-------GEDGAGKTSLI-RKIQGIEEYKKGR-GLEYL 51 Query: 95 FGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDL 153 + + Q NVW L + LL+ + L+ V+L++D+S+P L Sbjct: 52 YLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSL 111 Query: 154 ECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK----------------- 196 + +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 112 QKWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKD 169 Query: 197 ------------LDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGG 238 L PV++V K D S + +R G Sbjct: 170 DSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGA 229 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA 298 AL++ S K K ++ I +G VV + + I G D+ KIG Sbjct: 230 ALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDNDKKIGILHE 287 Query: 299 QSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 ++ ++ + E A+D + + + + Sbjct: 288 NFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 333 >gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] Length = 335 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 62/331 (18%), Positives = 111/331 (33%), Gaps = 47/331 (14%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R + P + +L+LG GKT+ I + E + Sbjct: 15 DDEDGQNLWSCILSEVSTRSR----SKLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 69 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 70 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSK 128 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK--------- 196 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 129 PWTALDSLQKWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 186 Query: 197 --------------------LDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 187 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 246 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 247 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 304 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQK 321 KIG ++ ++ Sbjct: 305 KKIGILHENFQTLKAEDNFEDIITKPPVRKV 335 >gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon nigroviridis] Length = 400 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 60/338 (17%), Positives = 107/338 (31%), Gaps = 41/338 (12%) Query: 38 RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGR 97 L+E R + P + +LV+G GKTT + K + + LEY + Sbjct: 3 ILSEVSTHSR----SKLPSGKNVLVMGEVGSGKTTLVAK-LQGVDEYMKGR-GLEYLYFS 56 Query: 98 RIGSG-KSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECA 156 N W L + L V + + +++ +D+S+P L+ Sbjct: 57 VHDDDIDDHARCNAWVLDGDLYHKGLQGVAVPVDSIGNTLLLITVDMSRPWNALDSLQKW 116 Query: 157 YKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------------------NK 192 R+ ++ +V PE LE V++ + Sbjct: 117 AAVAREHIDKL--RVAPETLRELEHNLVKQFQEYVEPGSGEDGTPQRRSEDEESILLPLG 174 Query: 193 DSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGGALLFYSQK 246 DS L PV++V K D + LR G +L++ S K Sbjct: 175 DSTLTHNLGIPVVVVCTKCDAIGTLEKEHDYRDEHLDFIQSHLRRFCLQYGASLVYTSVK 234 Query: 247 MPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGA 306 K +L + H +G P V + + I G D+ KI Sbjct: 235 EMKNLDILYKYLVHRLYGFPFPC--PAQVVERDAVFIPSGWDNEKKIAILHENFQTFKSD 292 Query: 307 TFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 +V ++ + E A+D + + + + Sbjct: 293 DTFEDVIVKPPVRKIVHEKEIQAEDDQVFLVKLQSLLA 330 >gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein, partial [Gallus gallus] Length = 388 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 115/344 (33%), Gaps = 45/344 (13%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L+E R R + P +TILVLG GKTT + K EH + LEY + Sbjct: 1 SSILSEVSTRSR----SKLPSGKTILVLGDNGSGKTTLMAK-LQGAEHGQKGR-GLEYLY 54 Query: 96 GRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + NVW L ++ LL+ + LQ VI ++D+S+P LE Sbjct: 55 LNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWTVMESLE 114 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------------------ 190 LR+ ++ K+ PE ++Q+ ++ + Sbjct: 115 KWAGVLREHIDKL--KIPPEEMRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQENAS 172 Query: 191 ----NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGAL 240 ++ L PV++V K D S + +R G AL Sbjct: 173 VSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQYGAAL 232 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 ++ S K K +L + H +G +V + + I G D+ KI Sbjct: 233 IYTSVKGEKNLDLLYKYLVHKMYG--FQLTTPALVVEKDAVFIPAGWDNEKKIAILHENF 290 Query: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 + ++ + A+ + + + Sbjct: 291 TRVKPGYAYEDFIAKPRVRKLVHTELVTAEADQEFLKRMQSLLA 334 >gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein light intermediate chain 2, partial [Equus caballus] Length = 490 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 108/365 (29%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 15 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 70 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 71 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 128 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 129 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEEMRELERKFVKDFQDYIEPE 186 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------ 219 D+ L PV++V K D S + Sbjct: 187 EGCQGSPQRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 246 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL+ S K K + I H P Sbjct: 247 EHFDFIQSHLRRFCLQYGAALIDTSVKEAKSLDLKNKCIIHPTSNDPVTSPGKASQSLF- 305 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 G D+ KI + ++ + + A+D + Sbjct: 306 -AFRPAGWDNEKKIAILHENFTTVKPEDVYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 364 Query: 340 DEIRS 344 + + Sbjct: 365 QSLLA 369 >gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 374 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 116/347 (33%), Gaps = 52/347 (14%) Query: 16 KMFVKRTEG-------GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 + R EG + PS + L+E R R + P +TILVLG Sbjct: 37 PVPQARNEGWGCGLLRYGAVRPSGPSTSSILSEVSTRSR----SKLPSGKTILVLGDNGS 92 Query: 69 GKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPM 127 GKTT + K EH + LEY + + NVW L ++ LL+ + Sbjct: 93 GKTTLMAK-LQGAEHGQKGR-GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAV 150 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERV 187 LQ VI ++D+S+P LE LR+ ++ K+ PE ++Q+ ++ Sbjct: 151 SAESLQHTIVIFVVDMSRPWTAMESLEKWAGVLREHIDKL--KIPPEETRGMQQKIIKEF 208 Query: 188 GQQ----------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP 219 + ++ L PV++V K D S + Sbjct: 209 QEYVEPEEAYQGSSQRRGPSSGQENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEK 268 Query: 220 ------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 +R G AL++ S K K +L + H +G Sbjct: 269 KRGYREEHFDFIQSHIRRFCLQYGAALIYTSVKGEKNLDLLYKYLVHKMYG--FQLTTPA 326 Query: 274 VVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQ 320 +V + + I G D+ KI + ++ Sbjct: 327 LVVEKDAVFIPAGWDNEKKIAILHENFTRVKPGYAYEDFIAKPRVRK 373 >gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin light chain A [Ornithorhynchus anatinus] Length = 471 Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 106/319 (33%), Gaps = 43/319 (13%) Query: 64 GSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQL 122 G GKT+ I K + + +EY + + Q NVW L + L Sbjct: 21 GEDGAGKTSLIGK-MQGIDEYKKGR-GMEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGL 78 Query: 123 LEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQR 182 L+ M + L+ V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ Sbjct: 79 LKFAMDANSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQK 136 Query: 183 TVERVGQQNKDSEK-----------------------------LDPLPFPVIIVGGKYDV 213 + + + E L PV++V K D Sbjct: 137 LIRDFQEYIEPGEDFPASPQRRNTTSQEDKDDSVILPLGADTLTYNLGIPVLVVCTKCDA 196 Query: 214 FSGFDPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA 267 S + +R G AL++ S K K ++ I +G P Sbjct: 197 ISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPF 256 Query: 268 HPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTD 327 VV + + I G D+ KIG ++ ++ + E Sbjct: 257 --KIPAVVVEKDAVFIPAGWDNDKKIGILHENFQTLKAEDSFEDIIIKPPVRKFVHEKEI 314 Query: 328 PAKDPGFKELVIDE-IRSQ 345 A+D + + Q Sbjct: 315 VAEDDQVFLMKQQSQLAKQ 333 >gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70877049|gb|EAN90434.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 422 Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 83/369 (22%), Positives = 143/369 (38%), Gaps = 38/369 (10%) Query: 22 TEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDRE 81 + +D+ + L E T E +L++G+ GKT+ + + F Sbjct: 48 PGMPQVTVDPTKDLWQNII-----LNTRENQVTQTEVNVLIVGTSGGGKTSLLRRIFSGV 102 Query: 82 EHAT----------RPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHG 131 ++ +PT AL+YSF RR QV + WEL QL EV + Sbjct: 103 NTSSSSVPKSFLRVKPTTALDYSFVRRNDRH-IAQVAHFWELAQGMELSQLCEVVITPEN 161 Query: 132 LQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE---LREILEQRTVERVG 188 + + + +++D S+P W + K + ++ +K+ + + L R VG Sbjct: 162 VHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVG 221 Query: 189 QQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMP 248 ++ D +L P +I+ K D F+G + + K R +R +AH+ G L+F S Sbjct: 222 MEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAEA 280 Query: 249 KLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG-----------DTG 297 LR + HL F S + + + D+++ IG TG Sbjct: 281 I---KLRAVMNHLVFVSTFDLKHIELDPERGAVLVIPSADTFADIGEPAVSDMGGLQSTG 337 Query: 298 AQSVERIGATFGMEVPQLQLEKQKLKE----TTDPAKDPGFKELVIDEIRSQKNEELAGL 353 ++R A P Q E + + + GF E +D +R QK +EL Sbjct: 338 DAELDRWKAPLDAMFPAKQSEGRMQNDSFLKRLYDTGENGFGEPTVDAVRKQKEDELEQY 397 Query: 354 MRDVLLRGK 362 + R K Sbjct: 398 RKSAFKREK 406 >gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosophila melanogaster] gi|24641224|ref|NP_727500.1| Dlic2 CG1938-PC, isoform C [Drosophila melanogaster] gi|24641226|ref|NP_727501.1| Dlic2 CG1938-PD, isoform D [Drosophila melanogaster] gi|16182605|gb|AAL13531.1| GH06357p [Drosophila melanogaster] gi|22832089|gb|AAF48011.2| CG1938-PA, isoform A [Drosophila melanogaster] gi|22832090|gb|AAN09288.1| CG1938-PC, isoform C [Drosophila melanogaster] gi|22832091|gb|AAN09289.1| CG1938-PD, isoform D [Drosophila melanogaster] Length = 493 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 60/351 (17%), Positives = 110/351 (31%), Gaps = 43/351 (12%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEY 93 ++ + E ++ +T P +++LVLG GKTT I K E + + LEY Sbjct: 29 NLWSAILNE---VQTQGSTKLPSNKSVLVLGDNATGKTTLIAK-LQGVEDPKKGS-GLEY 83 Query: 94 SFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTD 152 ++ + + VW L LL + VIL + ++QP + Sbjct: 84 AYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQPWGWLEQ 143 Query: 153 LECAYKGLRDTAQQMMEKV-TPELREILEQRTVERVGQQNKDSEK--------------- 196 L K L + E T + + D + Sbjct: 144 LNHWIKVLGQHIDSLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRTMRNNSIDE 203 Query: 197 -----------LDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGA 239 + L +++V K D + + + +R+ G + Sbjct: 204 DDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLRHGTS 263 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 L + S K K VL + H +G P +V + + I G DS KI Sbjct: 264 LFYTSVKEDKNCDVLYKYLTHRIYGLPFRT--PALVVEKDAVLIPAGWDSLKKISILYEN 321 Query: 300 SVERIGATFGMEVPQLQLEKQKL--KETTDPAKDPGFKELVIDEIRSQKNE 348 ++ + ++ + +E +D EI Q ++ Sbjct: 322 MHGVKAENPYTDIIKSPPTRKAVSNREAEVQTEDEQAFLARQQEILKQGDQ 372 >gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] Length = 433 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 57/313 (18%), Positives = 101/313 (32%), Gaps = 39/313 (12%) Query: 63 LGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQ 121 +G GKTT + K E + LEY + Q N W L + Sbjct: 1 MGEVGSGKTTLVAK-LQGVEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKG 58 Query: 122 LLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQ 181 L + + L+ ++ ++DLS+P L+ +RD ++ +V PE LE Sbjct: 59 LQKFAISLENLEDSLILFVVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEH 116 Query: 182 RTVERVGQQ--------------------------NKDSEKLDPLPFPVIIVGGKYDVFS 215 R ++ + ++ L P+++V K D S Sbjct: 117 RLTKQFQEYVEPGSDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAIS 176 Query: 216 GFDPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 + +R G ALL+ S K K +L + H +G P + Sbjct: 177 TLEKEHDYKDEHLDFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS 236 Query: 270 FRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPA 329 V + + I G D+ KI +V ++ + E A Sbjct: 237 --PAQVVEKDSVFIPSGWDNEKKIAILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQA 294 Query: 330 KDPGFKELVIDEI 342 +D + + + Sbjct: 295 EDDQVFLVKLQSL 307 >gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, isoform A [Tribolium castaneum] Length = 475 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 60/364 (16%), Positives = 118/364 (32%), Gaps = 48/364 (13%) Query: 17 MFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINK 76 M + + S +++ ++ ++ P + +LVLG GKTT + K Sbjct: 1 MPEEVA---KPTDDSKKNLWSQIL---SDVQNNGNPKLPSCKQVLVLGDNECGKTTIVAK 54 Query: 77 FFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQL 135 E + + LEY++ + Q ++VW L LL+ + Q Sbjct: 55 -LQGVEDPKKGS-GLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHTDLLKFALNEETFQHT 112 Query: 136 AVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM----------EKVTPELREILE----- 180 VIL + ++ P L+ L D ++ + + +E +E Sbjct: 113 LVILTVTMTAPWSILEQLQHWASVLADHLDKLKLDVDLRQNRRQHIVKMWQEYVEPGDEL 172 Query: 181 ------QRTVERVGQQN---------KDSEKLDPLPFPVIIVGGKYDVFSGFDP------ 219 +R+ G + + L +++V K D + Sbjct: 173 DPASPMKRSSRNFGDGEDGLEEQTSLPEGTLTNNLGLDIVVVVTKTDYIQTLEKEHDYRD 232 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 + +R G AL + S K K +L + H +G P +V + Sbjct: 233 EHLDFMQQWIRKFCLQYGAALFYTSAKEDKNCDLLYKYLTHRIYGFPFRT--PALVVEKD 290 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLK-ETTDPAKDPGFKELV 338 + I G D+ +KI + ++ ++ + ET A+D Sbjct: 291 AVFIPAGWDNMNKIRILYENLHTCKPDDYFRDIIVQPATRKTINRETELLAEDEQAFLAR 350 Query: 339 IDEI 342 +I Sbjct: 351 QQQI 354 >gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoobscura] gi|54643019|gb|EAL31763.1| GA15140-PA [Drosophila pseudoobscura] Length = 499 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 62/360 (17%), Positives = 115/360 (31%), Gaps = 44/360 (12%) Query: 34 DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEY 93 ++ + E ++ +T P +++LVLG GKTT I K E + + LEY Sbjct: 31 NLWSAILNE---VQTQGSTKLPANKSVLVLGDNATGKTTLIAK-LQGVEDPKKGS-GLEY 85 Query: 94 SFGRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTD 152 ++ + + VW L LL + VIL + ++QP + Sbjct: 86 AYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHFALNETNYAHTLVILTVSMTQPWGWLEQ 145 Query: 153 LECAYKGLRDTAQQM-MEKVTPELREILEQRTVERVGQQNKDSEK--------------- 196 L K L + + +E E+ T + + D + Sbjct: 146 LNHWIKVLGQHIESLPLEAKDKEMARQRLATTWQSYCEVGDDLDPGSPVKRTMRNNSIDE 205 Query: 197 -----------LDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGA 239 + L +++V K D + + + +RS G + Sbjct: 206 DDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRSFCLRTGAS 265 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 L + S K K +L + H +G P +V + + I G DS KI Sbjct: 266 LFYTSVKEDKNCDLLYKYLTHRIYGLPFRT--PALVVEKDAVLIPAGWDSLKKISILYEN 323 Query: 300 SVERIGATFGMEVPQLQLEKQKLKETTDP--AKDPGFKELVIDEIRSQKNEEL-AGLMRD 356 + +V + ++ + +D EI Q ++ +R Sbjct: 324 MHGIKAESPYSDVIKAPPTRKAVSNREVEVQTEDEQTFLARQQEILKQAGQDRGESPLRS 383 >gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_b [Mus musculus] Length = 458 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 103/365 (28%), Gaps = 82/365 (22%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------ 219 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 248 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR I + + Sbjct: 249 EHLDFIQAHLRRFCLQ---------------------CILGML---------------KD 272 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 273 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 332 Query: 340 DEIRS 344 + + Sbjct: 333 QSLLA 337 >gi|157128066|ref|XP_001661298.1| dynein light intermediate chain [Aedes aegypti] gi|108872707|gb|EAT36932.1| dynein light intermediate chain [Aedes aegypti] Length = 494 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 60/366 (16%), Positives = 113/366 (30%), Gaps = 49/366 (13%) Query: 13 RLQKMFVKRTEGGESATPSIQ-DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKT 71 ++ + ++ + ++ +T P +++LVLG GKT Sbjct: 8 TTSQVNGITATTPRKKDIDPKENLWSAIL---SEVQTQSSTKLPSNKSVLVLGDNASGKT 64 Query: 72 TAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTH 130 T I K E + + LEY++ + + VW L LL+ + Sbjct: 65 TLIAK-LQGVEDPKKGS-GLEYAYIDVRDEYRDDVTRLGVWILDGDPGHTNLLKYALNET 122 Query: 131 GLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ 190 VIL L ++ P + LE K L D + K+ PE R+ QR V Sbjct: 123 NYAHTLVILTLSMTTPWSWVDQLEHWIKMLDDHIAGL--KIDPEERQQCRQRLVTVWQSY 180 Query: 191 -------------------NKDSEKLDPLPFPVIIV-----------GGKYDVFSGFDP- 219 + + LD LP P ++ K D + + Sbjct: 181 CDTIDELDPGSPIKRTNRLSSVDDDLDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKE 240 Query: 220 -----IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 + +R + G +L + S K K +L + H +G P + Sbjct: 241 LDYRDEHFDFMQQWIRRFCLVYGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRT--PAL 298 Query: 275 VDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDP--AKDP 332 + + + I G D+ KI + ++ ++ + ++ Sbjct: 299 IVEKDAVLIPAGWDNMKKINILYENMQSCKPDDYYNDIIAQPPSRKTVSNREIEVQTEEE 358 Query: 333 GFKELV 338 Sbjct: 359 QAFLSR 364 >gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_a [Rattus norvegicus] Length = 455 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 101/365 (27%), Gaps = 85/365 (23%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R + P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRAR----SKLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKDFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------ 219 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRD 248 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR + Sbjct: 249 EHLDFIQAHLRGFCLQF---------------------------------------VEKD 269 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 270 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 329 Query: 340 DEIRS 344 + + Sbjct: 330 QSLLA 334 >gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella vectensis] gi|156225136|gb|EDO45956.1| predicted protein [Nematostella vectensis] Length = 422 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 62/344 (18%), Positives = 126/344 (36%), Gaps = 42/344 (12%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L++ Q + P ++I+++G+ GKTT I+K +E+ ++ LEY++ Sbjct: 1 SSILSDVQ----SSASRKLPSHKSIILIGNDESGKTTLISKLRGKEDDISKGH-GLEYTY 55 Query: 96 GRRIGSGKSP-QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 +NVW L + LL+ + + + V++++D S+P L Sbjct: 56 LEVHDEEIDDYTRLNVWILDGDPRNKSLLKYALTPKHARDVLVVMVVDCSRPWAIMESLH 115 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------------------ 190 + LR+ + K++P+ +E++ V++ Sbjct: 116 SWTEILREHIHSL--KLSPKELNEMEEKIVQQFQDYTDTEEASDENRRRSGTKDEDKVVL 173 Query: 191 -NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGALLFY 243 +++ +D L P+I++ K D + + +R G AL + Sbjct: 174 PLEENVLVDNLGIPMIVLVTKTDCMLSLEKDRDFHDEHFDFIQQHIRRYCLKHGAALFYT 233 Query: 244 SQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVER 303 S K K + + H +G P +V + + I G DS KIG Sbjct: 234 SVKENKNCNLFLKYVLHKIYGLPFKS--PALVVDKDSVFIPSGWDSMKKIGILNEHLKNI 291 Query: 304 IGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKN 347 + ++ L+E A++ ++ QKN Sbjct: 292 HPDDSFDDHIIKPALRKPLQEKEITAEEEQAFLAKQQQLL-QKN 334 >gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938-PA, isoform A [Apis mellifera] Length = 470 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 104/328 (31%), Gaps = 42/328 (12%) Query: 24 GGESATPSIQD-IAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 + P +D + + ++ + P + ILVLG GKTT I K E Sbjct: 17 SKKKEDPENKDNLWSSIL---AEVQNSSSNKLPSNKNILVLGDNESGKTTLIAK-LQGVE 72 Query: 83 HATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 + + LE+++ + Q ++VW L LL + V+L+ Sbjct: 73 DPKKGS-GLEFAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLRFALNAERFPHTLVMLVA 131 Query: 142 DLSQPQRFWTDLECAYKGLRDTAQQM-MEKVTPELREILEQRTVERVGQQNK-------- 192 ++ P L+ L D ++ ++ T + L + + + Sbjct: 132 AMTTPWAILDQLQSWAALLGDHIDKLPLDNDTWQRCRQLNVKKWQDYTEPGDELDPGSPL 191 Query: 193 -------DSEKLDPLPFP-----------VIIVGGKYDVFSGFDPII------RKHTCRC 228 D + +D LP P V++V K D S + + Sbjct: 192 RRTSRNLDDDTMDNLPLPEGVLTTNLGLDVVVVITKTDYMSTLEKEHDYKDEHFDFIQQW 251 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 +R G L + S K K +L + H + P +V + + I G D Sbjct: 252 IRRFCLQYGAGLFYTSAKEDKNCDLLYKYLTHRIYSLPFRT--PALVVEKDAVLIPAGWD 309 Query: 289 SWSKIGDTGAQSVERIGATFGMEVPQLQ 316 + KI + +V Sbjct: 310 NMKKISILHENLQSMKPDDYYRDVIAQP 337 >gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00000001598 [Nasonia vitripennis] Length = 486 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 55/356 (15%), Positives = 109/356 (30%), Gaps = 47/356 (13%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + + + ++ + +++ P + +LVLG GKTT I K E Sbjct: 21 DKSLENEDNLWSSIL---AQVQNSSNNKLPSNKNVLVLGDNESGKTTLIAK-LQGVEDPK 76 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + + LEY++ + Q ++VW L LL+ + V+L+ ++ Sbjct: 77 KGS-GLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLKFALNAKRFPNTLVMLVAAMT 135 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVT-----PELREILEQRTVERVGQQNKDSEK--- 196 P L+ + L D ++ + ++ + + D + Sbjct: 136 TPWALLDQLQFWSRVLGDHIDKLASDNDDFKQTWQDCRQQIKKKWQDYTEPGDDLDPGSP 195 Query: 197 ------------LDPLPFP-----------VIIVGGKYDVFSGFDP------IIRKHTCR 227 +D LP P +++V K D S + + Sbjct: 196 LRRTSRNLDDESVDNLPLPDGVLTTNLGLDIVVVITKTDYMSTLEKEHDYRDEHFDFMQQ 255 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G L + S K K +L + H + P +V + + I G Sbjct: 256 WIRRFCLQYGAGLFYTSVKEDKNCDLLYKYLTHRIYSLPFRT--PALVVEKDAVLIPAGW 313 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLE--KQKLKETTDPAKDPGFKELVIDE 341 D+ KI + +V K ++ +D E Sbjct: 314 DNMKKISILHENLQSMKPDDYYRDVIVKPPSNRKSVQRQVEVQTEDEQAFLTRQQE 369 >gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974436|ref|XP_001184479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 483 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 117/356 (32%), Gaps = 50/356 (14%) Query: 21 RTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + E+ Q++ + E P ++ILVLG GKTT +++ Sbjct: 12 SSAEKENDDDEPQNLWTSILSEVSSHSSS---KLPSCKSILVLGEDETGKTTLLSR-LQG 67 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + LEY + + VW L + E LL + L+ + VI+ Sbjct: 68 VEDPKKG-YGLEYLYLDVRDEDRDDTTRCGVWILAGENEHEDLLRYALTADNLEHMLVII 126 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------- 190 +D+ +P L+ + +R + ++ PE LEQR V++ Sbjct: 127 AVDMCRPWNIMDSLQKWTQVIRRHVDSL--RIPPEKLRELEQRLVQQFQAYTEPETGQDS 184 Query: 191 ------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPI------ 220 ++ L P+++V K D + + Sbjct: 185 SVTRRTSGVTKPTGAEDEEAVVLPLGETTLTHNLGVPIVVVVTKSDYVNTLEKEQDYSDE 244 Query: 221 IRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP 280 + +R G AL + S K K +L + H + P + + +V + Sbjct: 245 HLDFLQQNVRKFCLNYGAALFYVSVKENKNCDLLNRYLLHRLYDFPFNS--AALVVEKDA 302 Query: 281 LCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE-TTDPAKDPGFK 335 L + G D+ K+ EV + ++ L++ A+D Sbjct: 303 LFVPSGWDNLQKVSILYENMANIDPEKPYDEVIIKPVVRRLLQDNKEIIAEDEQVF 358 >gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Trypanosoma brucei TREU927] gi|70835124|gb|EAN80626.1| dynein light intermediate chain, putative [Trypanosoma brucei] Length = 418 Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 83/362 (22%), Positives = 136/362 (37%), Gaps = 42/362 (11%) Query: 33 QDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD----------REE 82 +D+ +A L E E + V+G GKT+ I + + + Sbjct: 64 KDLWQNIA-----LNTKENNLPQSEANLFVVGCSGAGKTSVIQRVCSAIGAGGNTSGKGK 118 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLD 142 +PT AL+Y + R Q ++ WEL QL EV + + + + +++D Sbjct: 119 TKVKPTTALDYQYTTRSDRH-VSQTVHFWELAQGMELSQLCEVVITPENVHLMHIAIVVD 177 Query: 143 LSQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDP 199 S P W L K + A ++++K+ + L R +G+ + D +++ Sbjct: 178 FSDPSSMWDTLAYWLKRVDRRANEILQKMRAKGSNTPDKLHARAQRALGEGHPDLKRVRL 237 Query: 200 LPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIC 259 P +IV K D F G K RCLR +AHL G L+F S LR + Sbjct: 238 SGLPTVIVCNKVDAFPG-PMEQMKTLTRCLRFIAHLYGAYLVFSSDADS---AKLRLLLN 293 Query: 260 HLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG---------------AQSVERI 304 HL F +P + + + I D++ IGD ++R Sbjct: 294 HLLFLTPFDARQVELDVERGTILIMPENDTFVDIGDPPLCDGPSGGPVTQSTGDSELDRW 353 Query: 305 GATFGMEVPQL----QLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 P + + + + + GF E ID IR QK+EEL + R Sbjct: 354 KVPLDAMFPPKAGGGRAQSDAMLKRLYDMGEGGFGEPTIDTIRRQKDEELEQYRKSAARR 413 Query: 361 GK 362 K Sbjct: 414 DK 415 >gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae str. PEST] gi|157018577|gb|EAA06916.4| AGAP000723-PA [Anopheles gambiae str. PEST] Length = 470 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 111/342 (32%), Gaps = 49/342 (14%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L+E Q + T P +++LVLG GKTT I K E + + LEY++ Sbjct: 1 SSILSEVQTQSN----TKLPSNKSVLVLGDNASGKTTLIAK-LQGVEDPKKGS-GLEYAY 54 Query: 96 GRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + ++VW L LL+ + VIL L ++ P + L+ Sbjct: 55 IDVRDEYRDDVTRLSVWILDGDPGHNNLLKFALNEQNFPHTLVILTLSMTTPWSWVDQLQ 114 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQR---TVERVGQQNKDSEK--------------- 196 K L D + K+ PE ++ + R + + D + Sbjct: 115 HWMKILDDHIAGL--KIDPEEKQQCQARLTTEWQNYCETIDDLDPGSPIKRTNRLPSVDD 172 Query: 197 -----LDPLPFPVIIVG-------GKYDVFSGFDP------IIRKHTCRCLRSMAHLIGG 238 P +G K D + + + +R + G Sbjct: 173 ELDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQWIRRFCLMYGA 232 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA 298 +L + S K K +L + H +G P +V + + I G D+ KI Sbjct: 233 SLFYTSVKEDKNCDLLYKYLTHRIYGLPFRT--PALVVEKDAVLIPAGWDNMKKISILYE 290 Query: 299 QSVERIGATFGMEVPQLQLEKQKL--KETTDPAKDPGFKELV 338 + ++ ++ + +E+ +D Sbjct: 291 NMQSCKPDDYYNDIIAQPPSRKTVSNRESEIQTEDEQSFLAR 332 >gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chain [Rattus norvegicus] gi|50927372|gb|AAH79201.1| Dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 311 Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats. Identities = 74/244 (30%), Positives = 125/244 (51%), Gaps = 6/244 (2%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E+++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRRCHGSDGDGMEIGEKSVFFIGSKNGGKTTIILRCLDR-DEPAKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEK---VTPELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + ++ K + + QR + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVTMKLGKANSKASSEMRQRMWSVMQKDHPDRELIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-MRGVINQLAF 239 Query: 264 GSPA 267 G Sbjct: 240 GIDK 243 >gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated family member (xbx-1) [Caenorhabditis elegans] gi|77799271|emb|CAB01645.2| Hypothetical protein F02D8.3 [Caenorhabditis elegans] Length = 370 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 93/355 (26%), Positives = 164/355 (46%), Gaps = 34/355 (9%) Query: 31 SIQDIAG--------RLAEEQQRLRQLEATTTP---------KERTILVLGSKCVGKTTA 73 +I D+A R AE +Q+L T + E I+ G++ GK++ Sbjct: 2 NIWDLAKQKLVENKQRAAELKQKLDDENGTQSDNYLSEVRRRHESHIIFAGNRKSGKSSF 61 Query: 74 INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQ 133 + F +R + + ++ LEY++ RR G + N+WELG +LL VP+ ++ Sbjct: 62 MLNFLER-KEDLKDSVGLEYTYARRT-RGNVKDIANLWELGGGATVTELLSVPITMKNVE 119 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 ++IL+LD++ W +E +R + + + L+ L ++ R+ + + Sbjct: 120 ICSLILLLDMTNLDEMWITIEKTVDSVRRLVENLERQ-DINLQTRLAEKMRLRLEKYDDG 178 Query: 194 SEKL-DPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 S K+ +P P PV IV KYD F F+ R+H C+ LR +A+ G L+ +S +M + K Sbjct: 179 SLKMCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPK 238 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV 312 ++++ H FG+ + ++ D N+P+ + G DS IG A +GA+ + Sbjct: 239 LVKNMTSHFAFGTVCP--QGYMTDHNKPMFVKCGFDSLESIGIPPASD-NFMGASSPFNL 295 Query: 313 PQLQ-----LEKQKL-----KETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDV 357 + +K + DP DP FKE ID + K +EL +R Sbjct: 296 WRESFISLWPQKTGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKELKNHIRSK 350 >gi|146097038|ref|XP_001468017.1| dynein light intermediate chain [Leishmania infantum JPCM5] gi|134072383|emb|CAM71091.1| dynein light intermediate chain, putative [Leishmania infantum] Length = 424 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 79/380 (20%), Positives = 151/380 (39%), Gaps = 45/380 (11%) Query: 12 QRLQKMFVKRTEGGESA---TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 Q L + G ++ P+ +D+ + +A E +++++G+ Sbjct: 48 QELSETPTTAATGTSASIVIDPT-KDLWQNI-----TRNIKDANVEQTETSLVMVGASGS 101 Query: 69 GKTTAINKFFDREEHA--------TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 GKTT +++ + + + + T AL+YSF RR +P + WE+ Sbjct: 102 GKTTLLHRIYTSFQSSSSGSGPKRVKATTALDYSFARRSERNVAPV-AHFWEIAQGTQFS 160 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQ---PQRFWTDLECAYKGLRDTAQQMMEKVTPE--- 174 QLL++ + + +A +++D S+ P W + L + +++ + Sbjct: 161 QLLDIVLTPENVHAVAAAVVVDASEEGLPVS-WETATYWLRRLDQRVSDISQRMKAKGST 219 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 + R + +G + D +++ P ++V K D F G D K CR +R +AH Sbjct: 220 TPAKILTRAQKAIGLDHPDLKRMRLSGIPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLAH 278 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG 294 L G ++F S++ + L + F +P P + + DS+ IG Sbjct: 279 LYGAHVVFTSEQESVRWRALMNF---TLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIG 335 Query: 295 DT-----------GAQSVERIGATFGMEVPQLQLEKQKLKE-----TTDPAKDPGFKELV 338 D G ++R A F P +L + K+ + + GF + V Sbjct: 336 DPDVSRLGGSVSTGDAELDRWKAPFDEAFPPKKLNEDKVMDDPFIRRLYDTAEGGFGDPV 395 Query: 339 IDEIRSQKNEELAGLMRDVL 358 ID +R QK+EEL + Sbjct: 396 IDALRKQKDEELEQYRKKSS 415 >gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] gi|39583371|emb|CAE66345.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] Length = 366 Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats. Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 38/355 (10%) Query: 31 SIQDIAG--------RLAEEQQRLRQLEATTTP---------KERTILVLGSKCVGKTTA 73 +I D+A R AE +Q+L E I++ G++ + Sbjct: 2 NIWDLAKQKLVENKQRAAELEQKLDDENGAVNDNYLAEVRRRHESHIIIAGNRQI----I 57 Query: 74 INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQ 133 I+ F E + LE+++ RR G V N+WELG + +LL VP+ ++ Sbjct: 58 IHVEFSGAERRFE-RIGLEFTYARRT-RGNVKDVANLWELGGGSSVTELLSVPITAKNVE 115 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 ++I++LD++ W +E +R + + + L+ + +++ R+ + Sbjct: 116 TCSLIVLLDMTNLSEMWITIEKTVDTVRRLVENLERQ-DANLQTRMAEKSRLRLEKYESS 174 Query: 194 SEKLD-PLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 S K+ P P P+ IV KYD F F+ R+H C+ LR +A+ G L+ YS +M + K Sbjct: 175 SLKMCAPCPLPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPK 234 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV 312 ++++ I H FG+ + ++ D N+P+ I G D+ IG +GA+ + Sbjct: 235 LVKNMISHFAFGTVCP--QGYITDHNKPMFIKCGFDNLEAIGIPPGSD-NFMGASSPFNL 291 Query: 313 PQL---QLEKQKL-------KETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDV 357 + L QK + DP DP FKE ID + K +EL +R Sbjct: 292 WRESFISLWPQKTGNVDVEDTKKQDPMIDPVFKEPSIDNLVEIKRKELENHIRSK 346 >gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00000012631 [Nasonia vitripennis] Length = 357 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 104/347 (29%), Positives = 176/347 (50%), Gaps = 27/347 (7%) Query: 31 SIQDIAGRLAEEQQRLRQLEATTTP---KERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + QD A LA + + T P E+++++LGS+ VGKTT I +F ++E+ +P Sbjct: 6 TNQDNARELALQASIQEDTQRKTDPEESHEKSLIILGSREVGKTTMIYRFLEKEDTP-KP 64 Query: 88 TLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMR----THGLQQLAVILMLDL 143 TLA++YS+GR+ G V++VWE+G L L+ MR +H V++MLDL Sbjct: 65 TLAMDYSYGRKAGKSLVKDVVHVWEVGHLA--PSLISGSMRGCTLSHSAHHTTVLIMLDL 122 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE-----KLD 198 +P W LE +R MM EL L +R + + ++ K D Sbjct: 123 GKPDVLWNSLEECLVAVR---AAMMMSYQQELVHDLRERKIRYLRERAKPGTEDEPPVDD 179 Query: 199 PLPFPVIIVGGKYDVFSGFDP-IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDT 257 P P + ++GGKYD F ++ + LR+ AH++G L ++S K L + ++ Sbjct: 180 PFPMRLCLIGGKYDEFRELHSGDDKESIGQALRAAAHVLGAGLHYHSAKDSHLLRRTKEL 239 Query: 258 ICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGD-----TGAQSVERIGATFGMEV 312 + H +G ++ V D+++PL + G+DS+S I A +++ I + Sbjct: 240 LSH--YGFKGQSTKASVTDYDKPLSVAAGSDSFSAIDLKISRNDYAVTLDEIKQIYVRRF 297 Query: 313 PQLQLEKQKLK-ETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 PQ+ + L + DPA DP F E ++D +R Q+ +E++ L+RD+L Sbjct: 298 PQVPKNQDVLPGDMDDPANDPNFNEPIVDRLRLQREQEISVLLRDML 344 >gi|157874331|ref|XP_001685649.1| dynein light intermediate chain, putative [Leishmania major] gi|68128721|emb|CAJ08854.1| dynein light intermediate chain, putative [Leishmania major] Length = 425 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 77/376 (20%), Positives = 148/376 (39%), Gaps = 44/376 (11%) Query: 12 QRLQKMFVKRTEGGESA---TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 Q L + G ++ P+ +D+ + +A E +++V+G+ Sbjct: 48 QELSEAPTTAATGTSASIVIDPT-KDLWQNI-----TRNVKDANVEQTETSLVVVGASGS 101 Query: 69 GKTTAINKFFDREEHAT--------RPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 GKTT +++ + + + + T AL+YSF RR +P + WE+ Sbjct: 102 GKTTLLHRIYTSFQSNSSGSGPKRVKATTALDYSFARRSERNVAPV-AHFWEIAQGTQFS 160 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQR--FWTDLECAYKGLRDTAQQMMEKVTPE---L 175 QLL++ + + + +++D S+ W + L + +++ + Sbjct: 161 QLLDIVVTPENVHAVVAAVVVDASEEGLPVAWETATYWLRRLDQRVSDISQRMKAKGSTT 220 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 + R + +G + D +++ P ++V K D F D K CR +R +AHL Sbjct: 221 PAKILTRAQKAIGLDHPDLKRMRLSGVPTVLVINKIDAFR-RDMQQLKFLCRSMRYLAHL 279 Query: 236 IGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGD 295 G ++F S++ + L + F +P P + + DS+ IGD Sbjct: 280 YGAHVVFTSEQESVRWRALMNF---TLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGD 336 Query: 296 T-----------GAQSVERIGATFGMEVPQLQLEKQ-KLKE-----TTDPAKDPGFKELV 338 G ++R A F P +L ++ K+ + + GF + V Sbjct: 337 PDVSRLGGSASTGDAELDRWKAPFDEAFPPKKLNEEGKVVDDPFIRRLYDTSEGGFGDPV 396 Query: 339 IDEIRSQKNEELAGLM 354 ID +R QK+EEL Sbjct: 397 IDALRKQKDEELEQYR 412 >gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 light intermediate chain [Apis mellifera] Length = 345 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 100/344 (29%), Positives = 186/344 (54%), Gaps = 22/344 (6%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEH 83 +++ +++DIA R E+++ R+ T ER+I+++GSK VGKTT +++F ++ + Sbjct: 2 ADQNSEENVRDIALRFCLEEEQRRKTNPNET-HERSIIIVGSKRVGKTTIVHRFLEK-DE 59 Query: 84 ATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGL----QQLAVIL 139 A +PT+A++YSFGR+ G +++VWE+G L + L+ M L + +++ Sbjct: 60 APKPTIAMDYSFGRKAGKSLIKNIVHVWEVGHLTS--SLVSAAMTGSSLTHSPHHVTILV 117 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDP 199 +LDLSQP+ WT E A +R+ + + + + + +++ ++ +DP Sbjct: 118 ILDLSQPEILWTTFEEALSVVRNAMKMSYDDKIIQELKKQRIKERKKIVEKE-----IDP 172 Query: 200 LPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIC 259 P + +GGKYD F D ++ + LR++AH++G +L ++S K L + ++D + Sbjct: 173 FPMRLCFIGGKYDQFKDLDLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIKDLLS 232 Query: 260 HLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT-----GAQSVERIGATFGMEVPQ 314 + GFG+ + DF +PL I GTDS+S I + ++ I + +PQ Sbjct: 233 YYGFGTQFSDIK--CTDFEKPLAISAGTDSFSSIDLQFPQTRPSAMLDTIKQIYVTHIPQ 290 Query: 315 LQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 + + DP+ DP F E +ID +R+Q+ EE+ L+ D+L Sbjct: 291 ESRSNEII--LEDPSNDPNFNEPIIDRLRTQREEEINILLHDML 332 >gi|154343515|ref|XP_001567703.1| dynein light intermediate chain, putative [Leishmania braziliensis MHOM/BR/75/M2904] gi|134065035|emb|CAM43147.1| dynein light intermediate chain, putative [Leishmania braziliensis] Length = 428 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 79/385 (20%), Positives = 149/385 (38%), Gaps = 49/385 (12%) Query: 11 HQRLQKMFVKRTEGGESA----TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK 66 L + V ++ P+ +D+ + +A E ++V+G+ Sbjct: 47 PPELSEAPVTAAA-DNNSQIVIDPT-KDLWQNI-----TRNVKDAAVEQTEINLVVVGAP 99 Query: 67 CVGKTTAINKFFDREEHA--------TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 GKTT +++ + + + + T AL+YSF RR +P + WE+ Sbjct: 100 GSGKTTLLHRIYTSFQSSASGSCSKRVKATTALDYSFARRSERNVAPV-AHFWEIAQGMQ 158 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQR--FWTDLECAYKGLRDTAQQMMEKVTPE-- 174 QLL+V + + + +++D S+ W + + + +++ + Sbjct: 159 FSQLLDVVVTPENVHAIVAAVVVDASEEGLPVAWEAATYWMRRIDQRVSDISQRMKAKGS 218 Query: 175 -LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA 233 E L R + VG ++ D +++ P ++V K D F G D K CR +R +A Sbjct: 219 TTPEKLLTRAQKAVGLEHPDLKRMRLSGVPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLA 277 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 HL G ++F S++ + L + F +P P + + DS+ I Sbjct: 278 HLYGAHVVFTSEQESVRWRALMNF---TLFQAPFDPKHLQTDPERGAVLLTADRDSFLDI 334 Query: 294 GDTG--------------AQSVERIGATFGMEVPQLQL-EKQKLKE-----TTDPAKDPG 333 GD ++R F P +L E+ K+ + + G Sbjct: 335 GDPNMSRLGGGGSSASTGDAELDRWKVPFDDAFPPKKLNEEDKVMDDPFIRRLYDTSEGG 394 Query: 334 FKELVIDEIRSQKNEELAGLMRDVL 358 F E +ID +R QK+EEL ++ Sbjct: 395 FGEPMIDTLRKQKDEELEQYRKNSS 419 >gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 3 [Canis familiaris] Length = 225 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 15/222 (6%) Query: 153 LECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGG 209 +E + + +M+ K+ + + Q+ + + + D E +DP P++I+G Sbjct: 1 MENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIPLVIIGS 60 Query: 210 KYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 61 KYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-VRGVINQLAFGIDKS- 118 Query: 270 FRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-------Q 320 +S VD N+PL I G DS S+IG + ++ A M++ + E+ Sbjct: 119 -KSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVFPPKSTN 177 Query: 321 KLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 178 TLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWK 219 >gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150 [Aspergillus niger] gi|134076075|emb|CAK39434.1| unnamed protein product [Aspergillus niger] Length = 523 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 119/392 (30%), Gaps = 54/392 (13%) Query: 15 QKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK-------- 66 + R G ++ PS +D + P E+ +L+LG Sbjct: 5 SQNPGSRFGTGNNSRPSSKDGPKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFL 63 Query: 67 -----CVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSLD-N 118 + N AL Y++ + + + V + L + Sbjct: 64 DTLAADSSDPSLSNDKRKGRVPPVANQFALGYTYQDVLDADHEDTLARVSAYLLSEPSLS 123 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREI 178 LL+ + + + V+++LD S P + L + LR ++ T + E Sbjct: 124 FAPLLKPLLTPQSIPETLVVILLDWSDPWTWIRRLREWVRLLR-HVLISLDDETKIVMEE 182 Query: 179 LEQRTVER--------------VGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFD 218 +R + L P L P+ +V D + Sbjct: 183 NLTEWRDRKRGMDSSSGGAQGFTSSAGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKLE 242 Query: 219 P------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPF 270 + +R++ G +L++ + + + L LG S Sbjct: 243 KDHGWHEEQFDFILQFMRTLLLKHGASLIYTTPFLANSLQSL--IHSSLGIHSLLKRQSL 300 Query: 271 RSHVVDFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPA 329 + +V+D ++ + + DSW KI +E I + +E+ Q E D + Sbjct: 301 KHNVIDRDK-ILVPSNWDSWGKIRIIREGFDMEGISTAWSIEI-QDPPEP-LTNGVDDRS 357 Query: 330 KDPGFKELVID--EIRSQKNEELAGLMRDVLL 359 D V D + + + RD + Sbjct: 358 SDEQTANAVDDGTSAVAIFEQTIQDPKRDTSM 389 >gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, member RAS oncogene family [Macaca mulatta] Length = 304 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 85/288 (29%), Gaps = 57/288 (19%) Query: 14 LQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTA 73 ++ G T A L+ + + + ++++G VGK+ Sbjct: 62 VRVTPAATPPGPTDTTA-----APALSLLGRAMGTRDDE-YDYLFKVVLIGDSGVGKSNL 115 Query: 74 INKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGL 132 +++F + ++ T+ +E++ GK+ +W+ + + R Sbjct: 116 LSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWDTAGQERYRAITSAYYR---- 170 Query: 133 QQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK 192 + +L+ D+++ + ++E K LRD A Sbjct: 171 GAVGALLVYDIAKHLT-YENVERWLKELRDHAD--------------------------- 202 Query: 193 DSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 +++VG K D+ +R R+ A G + + S + Sbjct: 203 -------SNIVIMLVGNKSDLRH-----LRAVPTDEARAFAEKNGLSFIETSALDSTNVE 250 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 TI + + + D E + I Sbjct: 251 AAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--NVVPIHVPPTTE 293 >gi|114675154|ref|XP_001147785.1| PREDICTED: similar to GTP-binding protein RAB11B [Pan troglodytes] Length = 348 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 76/254 (29%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 138 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 196 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 197 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 244 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 245 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 272 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 273 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PGN-NVVD 327 Query: 293 IGDTGAQSVERIGA 306 I ++ Sbjct: 328 ISVPPTTDGQKPNK 341 >gi|73987203|ref|XP_854399.1| PREDICTED: similar to RAB11B, member RAS oncogene family [Canis familiaris] Length = 410 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 80/265 (30%), Gaps = 56/265 (21%) Query: 48 QLEATTTPKERT-----ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGS 101 + P+E ++++G VGK+ +++F + ++ T+ +E++ Sbjct: 189 VSQPKRQPREVKTYLLRLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 248 Query: 102 GKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR 161 GK+ +W+ + + R + +L+ D+++ + ++E K LR Sbjct: 249 GKT-IKAQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELR 302 Query: 162 DTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPII 221 D A +++VG K D+ + Sbjct: 303 DHAD----------------------------------SNIVIMLVGNKSDLRH-----L 323 Query: 222 RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPL 281 R R+ A + + S + I + + + +E Sbjct: 324 RAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES- 382 Query: 282 CIWFGTDSWSKIGDTGAQSVERIGA 306 G + I ++ Sbjct: 383 ---PGN-NVVDISVPPTTDGQKPNK 403 >gi|66513627|ref|XP_623997.1| PREDICTED: similar to Rab-protein 11 CG5771-PB, isoform B [Apis mellifera] Length = 215 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 33/272 (12%), Positives = 80/272 (29%), Gaps = 68/272 (25%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R ++ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEAKAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + I + + + Sbjct: 143 AEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ----------------------KQ 180 Query: 293 IGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 I D R ++V + K+ Sbjct: 181 IRDPPEGDTIRPQNVEPIDVKPTMNSEGMRKQ 212 >gi|91076508|ref|XP_973251.1| PREDICTED: similar to CG5771-PB, isoform B [Tribolium castaneum] Length = 215 Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 81/278 (29%), Gaps = 68/278 (24%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQ 106 + ++++G VGK+ +++F + ++ T+ +E++ GK+ Sbjct: 2 SSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKT-I 60 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 +W+ + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 61 KAQIWDTAGQERYRAITAAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ 115 Query: 167 MMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC 226 +++VG K D+ +R Sbjct: 116 ----------------------------------NIVIMLVGNKSDLRH-----LRAVLT 136 Query: 227 RCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFG 286 ++ A G + + S + I + + Sbjct: 137 EEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQ------------------ 178 Query: 287 TDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 +I D V R ++V K+ Sbjct: 179 ----KQIRDPPEGDVIRPHNVEPIDVKPTMNTDGVRKQ 212 >gi|156551916|ref|XP_001607057.1| PREDICTED: similar to putative rab11 [Nasonia vitripennis] Length = 215 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 33/272 (12%), Positives = 80/272 (29%), Gaps = 68/272 (25%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R ++ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEAKTF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + I + + + Sbjct: 143 AEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ----------------------KQ 180 Query: 293 IGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 I D R ++V + K+ Sbjct: 181 IRDPPEGDTIRPQNVEPIDVKPTMSSEGMRKQ 212 >gi|149426497|ref|XP_001518037.1| PREDICTED: similar to rab11, partial [Ornithorhynchus anatinus] Length = 331 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 75/242 (30%), Gaps = 51/242 (21%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ + Sbjct: 129 LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWDTAGQER 187 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREI 178 + R + +L+ D+++ + ++E K LRD A Sbjct: 188 YRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------------- 229 Query: 179 LEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGG 238 +++VG K D+ +R R+ A G Sbjct: 230 ---------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAFAEKNGL 263 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA 298 + + S + TI + + + D E + I Sbjct: 264 SFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--NVVPIHVPPT 318 Query: 299 QS 300 Sbjct: 319 TE 320 >gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens] Length = 218 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 76/254 (29%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVERIGA 306 I ++ Sbjct: 198 ISVPPTTDGQKPNK 211 >gi|115398722|ref|XP_001214950.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191833|gb|EAU33533.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 508 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 124/375 (33%), Gaps = 36/375 (9%) Query: 16 KMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG--SKCVGKTTA 73 ++ R G ++ PS +D + P E+ +L+L S + Sbjct: 6 QIPGSRFGAGNNSRPSSKDGPKKNIWSSLLDNVANGKRLP-EKNLLILDTLSANPSDPSL 64 Query: 74 INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSLD-NAEQLLEVPMRTH 130 ++ AL Y++ + + + + V + L + LL+ + Sbjct: 65 SDEKRKGRVPPVANQFALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLLTPQ 124 Query: 131 GLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTPELREILE--- 180 + + V+++LD S P + L + LR D + +ME++ E R+ Sbjct: 125 SIPETLVVILLDWSDPWTWVRRLREWVRLLRHVLVSLDDETKIVMEEMMTEWRDRKRGMD 184 Query: 181 -QRTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDP------IIRKHTCR 227 G + L P L P+ +V D + + Sbjct: 185 AAGAQGLSGSGGPVTMPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEEFDFILQ 244 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPFRSHVVDFNEPLCIWF 285 LR++ G +L++ + + + L LG S + +V+D ++ + + Sbjct: 245 FLRTILLKHGASLIYTTPFLANSLQSL--IHSSLGIHSLLKRQSLKHNVIDRDK-ILVPS 301 Query: 286 GTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 DSW KI +E + + +E+ Q E D ++ + Sbjct: 302 NWDSWGKIRIIREGFDMEGVSTAWSIEI-QDLPEPLTNGPADDKPEEDPSGMDDRSSAVT 360 Query: 345 QKNEELAGLMRDVLL 359 + + RD + Sbjct: 361 IFEQTIKDPKRDTSM 375 >gi|149692307|ref|XP_001496560.1| PREDICTED: similar to rab11 [Equus caballus] Length = 255 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 80/262 (30%), Gaps = 51/262 (19%) Query: 40 AEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRR 98 +++ L T I+++G VGK+ +++F + ++ T+ +E++ Sbjct: 33 SDQSAVFTSLSTPTPISSLVIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 92 Query: 99 IGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYK 158 GK+ +W+ + + R + +L+ D+++ + ++E K Sbjct: 93 QVDGKT-IKAQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLK 146 Query: 159 GLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFD 218 LRD A +++VG K D+ Sbjct: 147 ELRDHAD----------------------------------SNIVIMLVGNKSDLRH--- 169 Query: 219 PIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFN 278 +R R+ A G + + S + TI + + + D Sbjct: 170 --LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRR 224 Query: 279 EPLCIWFGTDSWSKIGDTGAQS 300 E + I Sbjct: 225 ENDMSPSN--NVVPIHVPPTTE 244 >gi|121713178|ref|XP_001274200.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] gi|119402353|gb|EAW12774.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] Length = 509 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 63/386 (16%), Positives = 124/386 (32%), Gaps = 61/386 (15%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG-------------SKCVGK 70 G ++ PS +D + P E+ +L+LG S Sbjct: 2 SGNNSRPSSKDGPKKNIWSSMLDSVANGKRLP-EKNLLILGGTQDTQREFLETLSADTSD 60 Query: 71 TTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSLD-NAEQLLEVPM 127 +T I + AL Y++ + + + + V + L + LL+ + Sbjct: 61 STLIGEKRKGRVPPIANQFALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLL 120 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTPELREILE 180 + + V+++LD S P + L + LR D + +ME++ E R+ Sbjct: 121 TPQSVPETLVVILLDWSDPWTWIRRLREWVRLLRHVLFSLDDETKIVMEEIMTEWRDRKR 180 Query: 181 ------QRTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDP------IIR 222 + L P L PV +V D + Sbjct: 181 GMDSGSAGAQGLTSSGGPVTIPLGPGEWDEGLGIPVCVVCQGADKIEKLEKDHGWREEEF 240 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPFRSHVVDFNEP 280 + LR++ G +L++ + + + L LG S + +V+D ++ Sbjct: 241 DFILQFLRTILLKHGASLIYTTPFLANSLQSL--IHSSLGIHSLLKRQSLKHNVIDRDK- 297 Query: 281 LCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEV--PQLQLEKQKLKETTD----PAKDPG 333 + + DSW KI +E + + +E+ P L E D A+D Sbjct: 298 ILVPPNWDSWGKIRIIREGFDMEGVSTAWSIEIQDPPEPLPGSVHYEPQDEGATAAEDG- 356 Query: 334 FKELVIDEIRSQKNEELAGLMRDVLL 359 + + + R+ + Sbjct: 357 ------TSAVTIFEQTITDPKRNASM 376 >gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct] Length = 219 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 76/254 (29%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVERIGA 306 I ++ Sbjct: 198 ISVPPTTDGQKPNK 211 >gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis] Length = 218 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 76/251 (30%), Gaps = 51/251 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVER 303 I +R Sbjct: 198 ISVPPTTDSQR 208 >gi|84000297|ref|NP_001033251.1| hypothetical protein LOC534708 [Bos taurus] gi|116255983|sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A gi|83405346|gb|AAI11144.1| Similar to RAB11a, member RAS oncogene family [Bos taurus] Length = 216 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 75/248 (30%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + TI + + + D E + Sbjct: 143 AEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--NVVP 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 IHVPPTTE 205 >gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos] Length = 216 Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats. Identities = 33/247 (13%), Positives = 75/247 (30%), Gaps = 51/247 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + TI + + + D E + Sbjct: 143 AEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--NVVP 197 Query: 293 IGDTGAQ 299 I Sbjct: 198 IHVPPTT 204 >gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic construct] gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct] gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct] gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct] gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct] gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct] Length = 217 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 75/248 (30%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + TI + + + D E + Sbjct: 143 AEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--NVVP 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 IHVPPTTE 205 >gi|6679583|ref|NP_033023.1| RAB11B, member RAS oncogene family [Mus musculus] gi|1172815|sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B gi|433064|gb|AAC42093.1| Rab11b gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus] gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus] gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus] gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus] gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus] gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus] gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus] gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus] gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus] gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus] gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus] gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus] Length = 218 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 76/254 (29%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVERIGA 306 I +R Sbjct: 198 ISVPPTTDGQRPNK 211 >gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus] Length = 216 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 34/248 (13%), Positives = 76/248 (30%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + TI + + H+ D E + Sbjct: 143 AEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---HMSDRRENDMSPSN--NVVP 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 IHVPPTTE 205 >gi|4758984|ref|NP_004654.1| Ras-related protein Rab-11A [Homo sapiens] gi|13592148|ref|NP_112414.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|31980840|ref|NP_059078.2| RAB11a, member RAS oncogene family [Mus musculus] gi|54792725|ref|NP_001003276.1| Ras-related protein Rab-11A [Canis lupus familiaris] gi|72535192|ref|NP_001026958.1| Ras-related protein Rab-11A [Sus scrofa] gi|126722661|ref|NP_001075720.1| tubulovesicle-associated protein [Oryctolagus cuniculus] gi|73999640|ref|XP_855589.1| PREDICTED: rab11 GTP-binding protein [Canis familiaris] gi|114657631|ref|XP_510490.2| PREDICTED: similar to rab11 [Pan troglodytes] gi|126277069|ref|XP_001367185.1| PREDICTED: similar to rab11 [Monodelphis domestica] gi|50402540|sp|P62494|RB11A_RAT Ras-related protein Rab-11A (Rab-11) (24KG) gi|50402541|sp|P62490|RB11A_CANFA Ras-related protein Rab-11A (Rab-11) gi|50402542|sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A (Rab-11) (YL8) gi|50402543|sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A (Rab-11) gi|50402544|sp|P62493|RB11A_RABIT Ras-related protein Rab-11A (Rab-11) gi|75056558|sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A gi|75070685|sp|Q5R9M7|RB11A_PONPY Ras-related protein Rab-11A gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens] gi|917|emb|CAA39799.1| rab11 [Canis familiaris] gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens] gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein gi|310067|gb|AAA31491.1| tubulovesicle-associated protein gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens] gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens] gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus] gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus] gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens] gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens] gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens] gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens] gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens] gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo pygmaeus] gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct] gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct] gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa] gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus] gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus] gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus] gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus] gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct] gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct] gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus] gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|1089909|prf||2018147A GTP-binding protein rab11 Length = 216 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 75/248 (30%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + TI + + + D E + Sbjct: 143 AEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--NVVP 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 IHVPPTTE 205 >gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var. neoformans B-3501A] Length = 213 Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 77/246 (31%), Gaps = 51/246 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVM 108 + + ++++G VGK+ +++F + ++ T+ +E++ GK+ Sbjct: 3 DGSNYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKT-VKA 61 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R + +L+ D+++ Q + ++ K LRD A Sbjct: 62 QIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHQT-YENVTRWLKELRDHADA-- 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 +++VG K D+ +R + Sbjct: 115 --------------------------------NIVIMLVGNKSDL-----KHLRAVSTDE 137 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP-----LCI 283 + A G + + S + I + + D +P + + Sbjct: 138 AKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIKPSGGETILV 197 Query: 284 WFGTDS 289 D Sbjct: 198 APTADD 203 >gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus] Length = 218 Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 76/254 (29%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVERIGA 306 I +R Sbjct: 198 ISVPPTTDGQRPNK 211 >gi|57524801|ref|NP_001005827.1| Ras-related protein Rab-11A [Gallus gallus] gi|82233797|sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A gi|53133464|emb|CAG32061.1| hypothetical protein [Gallus gallus] Length = 216 Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 75/248 (30%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + TI + + + D E + Sbjct: 143 AEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--NVVP 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 IHVPPTTE 205 >gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosophila melanogaster] gi|22832093|gb|AAN09291.1| CG1938-PB, isoform B [Drosophila melanogaster] Length = 398 Score = 197 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 79/278 (28%), Gaps = 37/278 (13%) Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + VW L LL + VIL + ++QP + L K L Sbjct: 2 TRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQPWGWLEQLNHWIKVLGQHID 61 Query: 166 QMMEKV-TPELREILEQRTVERVGQQNKDSEK--------------------------LD 198 + E T + + D + + Sbjct: 62 SLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLLPLTEDALIT 121 Query: 199 PLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 L +++V K D + + + +R+ G +L + S K K Sbjct: 122 NLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLRHGTSLFYTSVKEDKNCD 181 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV 312 VL + H +G P +V + + I G DS KI ++ Sbjct: 182 VLYKYLTHRIYGLPFRT--PALVVEKDAVLIPAGWDSLKKISILYENMHGVKAENPYTDI 239 Query: 313 PQLQLEKQKL--KETTDPAKDPGFKELVIDEIRSQKNE 348 + ++ + +E +D EI Q ++ Sbjct: 240 IKSPPTRKAVSNREAEVQTEDEQAFLARQQEILKQGDQ 277 >gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens] Length = 218 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 76/254 (29%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVERIGA 306 I ++ Sbjct: 198 ISVPPTTDGQKPNK 211 >gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] gi|148234494|ref|NP_001087765.1| MGC84419 protein [Xenopus laevis] gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis] gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] Length = 216 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 76/248 (30%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------KIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + TI + + + + D E + Sbjct: 143 AEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ---TQMSDRRENDMSPSN--NVVP 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 IHVPPTTE 205 >gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens] Length = 218 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 76/254 (29%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SDIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVERIGA 306 I ++ Sbjct: 198 ISVPPTTDGQKPNK 211 >gi|14249144|ref|NP_116006.1| RAB11B, member RAS oncogene family [Rattus norvegicus] gi|78369332|ref|NP_001030468.1| RAB11A, member RAS oncogene family [Bos taurus] gi|109123235|ref|XP_001093925.1| PREDICTED: RAB11B, member RAS oncogene family [Macaca mulatta] gi|38258938|sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B (GTP-binding protein YPT3) gi|50403673|sp|O35509|RB11B_RAT Ras-related protein Rab-11B gi|108860922|sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus] gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens] gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus] gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct] gi|75773827|gb|AAI05163.1| RAB11A, member RAS oncogene family [Bos taurus] gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis] gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus] Length = 218 Score = 196 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 76/254 (29%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVERIGA 306 I ++ Sbjct: 198 ISVPPTTDGQKPNK 211 >gi|149734235|ref|XP_001490105.1| PREDICTED: similar to Rab22a protein [Equus caballus] Length = 272 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 77/270 (28%), Gaps = 46/270 (17%) Query: 2 RLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTIL 61 R P +++ L + ++ E+Q+ +E + Sbjct: 28 REPQRTSVVYEPLSDGAWSERPRPRVDARAGPGLSLLNLEQQRARASGSRAMALRELKVC 87 Query: 62 VLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 +LG VGK++ + +F D + PT+ + +W+ + Sbjct: 88 LLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQ-NELHKFLIWDTAGQERFR 146 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 L + R A I++ D+++ + F + L+ K L Sbjct: 147 ALAPMYYR----GSAAAIIVYDITKEETF-STLKNWVKELGQH----------------- 184 Query: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 P V I G K D+ R+ R + A I Sbjct: 185 -----------------GPPNIVVAIAGNKCDLVDV-----REVMERDAKDYADSIHAIF 222 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 + S K L I + A+P Sbjct: 223 VETSAKNAININELFIEISRRIPSTDANPP 252 >gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus] Length = 218 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 76/254 (29%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVERIGA 306 I ++ Sbjct: 198 ISVPPTTDGQKPNK 211 >gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum] Length = 228 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 32/248 (12%), Positives = 76/248 (30%), Gaps = 49/248 (19%) Query: 38 RLAEEQQRLRQLEATT---TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEY 93 RL +++ + ++++G VGK+ +++F D + ++ T+ +E+ Sbjct: 5 RLVKKKSTYGSPMSGREDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEF 64 Query: 94 SFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDL 153 + +W+ + + R + +++ D+ + Q F +L Sbjct: 65 ATRNV-NIDGKVIKAQIWDTAGQERYRAITSAYYR----GAVGALVVYDVCKLQSF-HNL 118 Query: 154 ECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDV 213 LRD A++ +++VG K D+ Sbjct: 119 TSWLNELRDHAEK----------------------------------NIVMMLVGNKCDL 144 Query: 214 FSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 +R R A G + + S + I + + + Sbjct: 145 RH-----LRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHPPVN 199 Query: 274 VVDFNEPL 281 +D L Sbjct: 200 NIDMKMSL 207 >gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] Length = 218 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 75/253 (29%), Gaps = 61/253 (24%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD---- 288 A + + S + I + + +VD G D Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK---QMVDR-------PGHDESPG 192 Query: 289 -SWSKIGDTGAQS 300 + I Sbjct: 193 NNVVDISVPPTTD 205 >gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca coagulata] Length = 215 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 34/272 (12%), Positives = 79/272 (29%), Gaps = 68/272 (25%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARTF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + I + + + Sbjct: 143 AERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQ----------------------KQ 180 Query: 293 IGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 I D R ++V K+ Sbjct: 181 IRDPPEGDTIRPTNVEAIDVKPTVNTDSVRKQ 212 >gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermediate chain [Tetrahymena thermophila] Length = 474 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 84/359 (23%), Positives = 152/359 (42%), Gaps = 22/359 (6%) Query: 12 QRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKT 71 R Q+ + S D+ E + + E+T++V+G K GKT Sbjct: 2 NRNQEDNEQENNEVNKGDRSNIDLWSHAEESELKQGFA----KNLEKTLVVIGDKGSGKT 57 Query: 72 TA--INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRT 129 T I K + + PT+ L+Y + RR + + +++ +ELG +++ +P+ Sbjct: 58 TFVNILKNMQQVDDRYIPTVGLDYQYVRRTNANRKE-LIHSYELGGGKEQSKMITIPISK 116 Query: 130 HGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ--MMEKVTPELREIL---EQRTV 184 + IL+LDLS+P + ++ +R Q + TPE + E Sbjct: 117 QNFRDAFYILVLDLSKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQ 176 Query: 185 ERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYS 244 R + D ++ LP I++G KYD+F D RK R LR +AH+ G +L F S Sbjct: 177 ARFES-HPDKNRVKILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFAS 235 Query: 245 QKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERI 304 K L + +R + + FG + + + P+ I D +K+G Sbjct: 236 SKNNDLFQNVRSIMNNALFG--KTLAQYYQSEHLRPIEISLSKDELAKMGLPQISGNMTY 293 Query: 305 GATFGMEVPQLQLEKQKLKETTDPAKDP-----GFKELVIDEIRSQKNEELAGLMRDVL 358 F + + E + + D ++DP F E ID IR++K++E+ + ++ + Sbjct: 294 LEAFKKVIQETFPENKGAQ--NDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKEFM 350 >gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 233 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 13/211 (6%) Query: 162 DTAQQMMEKVTPELREILEQRTVERVGQQN-KDSEKLDPLPFPVIIVGGKYDVFSGFDPI 220 A++ + R +L ++ KD E +DP P P++I+G KYD+F FDP Sbjct: 20 QHAKRHCSLLGTGWRNLLAGLNQHTNHSRHLKDRELIDPFPIPLVIIGSKYDIFQDFDPE 79 Query: 221 IRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP 280 RK C+ LR +AH G +L+F S+ L K +R I L FG +S VD N+P Sbjct: 80 KRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAFGIDKS--KSICVDQNKP 136 Query: 281 LCIWFGTDSWSKIGDTG--AQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAKD 331 L I G DS +IG + ++ A ME+ + +K LK DPA+D Sbjct: 137 LFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLFPPKSTGTLKAVQDPARD 196 Query: 332 PGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 P + E +DE+R QK++EL R K Sbjct: 197 PQYAESEVDEMRVQKDQELEHYKRSSSKTWK 227 >gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries] Length = 208 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 32/247 (12%), Positives = 72/247 (29%), Gaps = 51/247 (20%) Query: 55 PKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWEL 113 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWDT 59 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 + + R + +L+ D+++ + ++E K LRD A Sbjct: 60 AGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD-------- 106 Query: 174 ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA 233 +++VG K D+ R R+ A Sbjct: 107 --------------------------SNIVIMLVGNKSDLRH-----FRAVPTDEARAFA 135 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 G + + + TI + + D E + I Sbjct: 136 EKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQK---QMSDRRENDMFPSN--NVVPI 190 Query: 294 GDTGAQS 300 Sbjct: 191 HVPPTTE 197 >gi|4758986|ref|NP_004209.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens] Length = 218 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 77/254 (30%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + ++ R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRRITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVERIGA 306 I ++ Sbjct: 198 ISVPPTTDGQKPNK 211 >gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966] Length = 213 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 31/250 (12%), Positives = 76/250 (30%), Gaps = 51/250 (20%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQV 107 + ++++G GK+ +++F + +R T+ +E++ GK+ Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKT-IK 60 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 +W+ + + R + +L+ D+++ + ++ K LRD A Sbjct: 61 AQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHST-YVNVSRWLKELRDHAD-- 113 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 V++VG K D+ +R Sbjct: 114 --------------------------------SNIVVMLVGNKSDLRH-----LRAVPTE 136 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP-----LC 282 ++ A + + S + I + ++ D +P + Sbjct: 137 EAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSSDDVIKPSGGETIS 196 Query: 283 IWFGTDSWSK 292 + TD + Sbjct: 197 VQPSTDDGGQ 206 >gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|148237448|ref|NP_001087959.1| hypothetical protein LOC494642 [Xenopus laevis] gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis] gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] Length = 218 Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 74/248 (29%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDES----PGN-NVVD 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 ISVPPTTD 205 >gi|60302752|ref|NP_001012569.1| RAB11B, member RAS oncogene family [Gallus gallus] gi|126323801|ref|XP_001376337.1| PREDICTED: hypothetical protein [Monodelphis domestica] gi|60098771|emb|CAH65216.1| hypothetical protein [Gallus gallus] Length = 218 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 74/248 (29%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDES----PGN-NVVD 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 ISVPPTTD 205 >gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Danio rerio] gi|29294722|gb|AAH48889.1| Zgc:55760 [Danio rerio] Length = 218 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 75/253 (29%), Gaps = 61/253 (24%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD---- 288 A + + S + I + + +VD G D Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK---QMVDR-------PGHDESPG 192 Query: 289 -SWSKIGDTGAQS 300 + I Sbjct: 193 NNVVDISVPPTTD 205 >gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens] Length = 218 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 76/254 (29%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + + + I + + + +E G + Sbjct: 143 AEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVERIGA 306 I ++ Sbjct: 198 ISVPPTTDGQKPNK 211 >gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase Length = 184 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 70/215 (32%), Gaps = 46/215 (21%) Query: 52 TTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNV 110 + ++++G VGK+ +++F + ++ T+ +E++ GK+ + Sbjct: 15 GSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQI 73 Query: 111 WELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEK 170 W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 74 WDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD----- 123 Query: 171 VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLR 230 +++VG K D+ +R R Sbjct: 124 -----------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEAR 149 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 + A G + + S + TI + Sbjct: 150 AFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184 >gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis] gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis] Length = 218 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 83/267 (31%), Gaps = 61/267 (22%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R ++ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEAKAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S +V I + + DS S Sbjct: 143 AEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQIH---------------DSPSS 187 Query: 293 IGDTGAQSVERIGATFGMEVPQLQLEK 319 G + +V+ I + + + + Sbjct: 188 DGSHPSNNVQTIHVAPTTDDDRKKRVQ 214 >gi|50540176|ref|NP_001002555.1| hypothetical protein LOC436828 [Danio rerio] gi|125808482|ref|XP_001330902.1| PREDICTED: hypothetical protein [Danio rerio] gi|125808488|ref|XP_001336227.1| PREDICTED: hypothetical protein [Danio rerio] gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio] Length = 218 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 74/248 (29%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHDES----PGN-NVVD 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 ISVPPTTD 205 >gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] Length = 218 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 72/248 (29%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK----QIAERSAHGESPGN-NVVD 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 ISVPPTTD 205 >gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus oryzae] Length = 523 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 63/398 (15%), Positives = 124/398 (31%), Gaps = 59/398 (14%) Query: 13 RLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG-------- 64 + G ++ PS +D + P E+ +L+LG Sbjct: 3 TSSHNPGPKLGSGNNSRPSSKDGPKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQRE 61 Query: 65 -----SKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSLD 117 S + N AL Y++ + + + + V + L Sbjct: 62 FLDTLSADTSDPSLSNDRRKGRLPPVANQFALGYTYQDVLDADQEDTLARVSAYLLSEPS 121 Query: 118 -NAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMME 169 + LL+ + + + V+++LD S P + L + LR D + +ME Sbjct: 122 LSFAPLLKPLLTAQSVPETLVVILLDWSDPWTWVRRLREWVRLLRHVLISLDDETKIVME 181 Query: 170 KVTPELREILE------QRTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGF 217 + E R+ + L P L P+ +V D Sbjct: 182 ETMTEWRDRKRGMDPSSTGAQGLTSSGGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKL 241 Query: 218 DP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK-VLRDTICHLGFGS--PAH 268 + + +R++ G +L++ + P L + LG S Sbjct: 242 EKDHGWHEEEFDFILQFMRTILLKHGASLIYTT---PFLVNSLQSLLHSSLGIHSLLKRQ 298 Query: 269 PFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEV--PQLQLEKQKLKET 325 + +V+D ++ + + DSW KI +E + + +E+ P L + Sbjct: 299 SLKHNVIDRDK-ILVPSNWDSWGKIRIIREGFDMEGVSTAWSIEIQDPPEPLSGSSM--- 354 Query: 326 TDPAKDPGFKELVID---EIRSQKNEELAGLMRDVLLR 360 D AK G +D + + + RD + Sbjct: 355 -DDAKPQGENAAGLDDGTSAVAIFEQTIKDPKRDASMT 391 >gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase Length = 199 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 75/248 (30%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 60 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + ++ R + +L+ D+++ + ++E K LRD A Sbjct: 61 TAGQERYRRITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 108 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 109 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 136 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 137 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PGN-NVVD 191 Query: 293 IGDTGAQS 300 I Sbjct: 192 ISVPPTTD 199 >gi|131849|sp|P22129|RB11B_DISOM Ras-related protein Rab-11B (ORA3) gi|213121|gb|AAA49233.1| GTP-binding protein Length = 218 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 72/248 (29%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK----QISDRSAHDESPGN-NVVD 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 ISVPPTTD 205 >gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus] Length = 217 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 79/255 (30%), Gaps = 50/255 (19%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + D N+P D+ Sbjct: 143 AEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIRNDTD-NDP---SPSGDNVKP 198 Query: 293 IGDTGAQSVERIGAT 307 I S + Sbjct: 199 ISIAPTDSSDTRKKQ 213 >gi|17137216|ref|NP_477170.1| Rab-protein 11 CG5771-PB, isoform B [Drosophila melanogaster] gi|19549675|ref|NP_599137.1| Rab-protein 11 CG5771-PA, isoform A [Drosophila melanogaster] gi|125776219|ref|XP_001359206.1| GA19116-PA [Drosophila pseudoobscura] gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster] gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster] gi|7300703|gb|AAF55850.1| CG5771-PA, isoform A [Drosophila melanogaster] gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster] gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster] gi|23171847|gb|AAN13849.1| CG5771-PB, isoform B [Drosophila melanogaster] gi|54638949|gb|EAL28351.1| GA19116-PA [Drosophila pseudoobscura] Length = 214 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 77/265 (29%), Gaps = 68/265 (25%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRSVPTDEAKLF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + I + + + Sbjct: 143 AERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ----------------------KQ 180 Query: 293 IGDTGAQSVERIGATFGMEVPQLQL 317 I D V R ++V Sbjct: 181 IRDPPEGDVIRPSNVEPIDVKPTVT 205 >gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp Length = 191 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 69/211 (32%), Gaps = 46/211 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 26 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 84 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 85 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 132 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 133 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 160 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 A G + + S + TI + Sbjct: 161 AEKNGLSFIETSALDSTNVEAAFQTILTEIY 191 >gi|55925277|ref|NP_001007360.1| RAB11a, member RAS oncogene family [Danio rerio] gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio] gi|94733840|emb|CAK10790.1| novel protein (zgc:103679) [Danio rerio] gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio] Length = 215 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 79/253 (31%), Gaps = 51/253 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-VKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + L S + TI + + + D + + Sbjct: 143 AEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQK---QMSDRRDNDMSPSN--NVVS 197 Query: 293 IGDTGAQSVERIG 305 I ++ ++ Sbjct: 198 IQVQPTENKPKMQ 210 >gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family [Xenopus laevis] gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis] Length = 218 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 74/248 (29%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GVVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDES----PGN-NVVD 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 ISVPPTTD 205 >gi|119479611|ref|XP_001259834.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] gi|119407988|gb|EAW17937.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] Length = 505 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 56/382 (14%), Positives = 124/382 (32%), Gaps = 57/382 (14%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG-------------SKCVGK 70 G ++ PS +D + + P E+ +L+LG S Sbjct: 2 SGNNSRPSSKDGSKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFIETLSADTSD 60 Query: 71 TTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSLD-NAEQLLEVPM 127 T I++ AL Y++ + + + + V + L + LL+ + Sbjct: 61 PTLISEKRRGRLPPVANQFALGYTYHDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLL 120 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTPELREI-- 178 + + V+++LD S P + L + LR D + +ME++ E ++ Sbjct: 121 TPQSVPETLVVILLDWSDPWTWVRRLREWVRLLRHVLISLDDETKIVMEEIMTEWKDRKR 180 Query: 179 -LEQRTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDPII------RKHT 225 ++ + P L P+ +V D + Sbjct: 181 GMDSGAQGLASSGGPVTIPPGPGEWDEGLGIPMCVVCQGADKIEKLEKEHGWREEEFDFI 240 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPFRSHVVDFNEPLCI 283 + +R++ G +L + + + + L LG S + +V+D ++ + + Sbjct: 241 LQFMRTILLKHGASLTYTTTFLANSLQSL--IHSSLGIHSLLKRQSLKHNVIDRDK-ILV 297 Query: 284 WFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQ-----LEKQKLKETTDPAKDPGFKEL 337 DSW KI +E + + +E+ Q ++ A+D Sbjct: 298 PPNWDSWGKIRIIREGFDMEGVSTAWSIEIQDAPEPLTGAVDQPQDDSAMGAEDG----- 352 Query: 338 VIDEIRSQKNEELAGLMRDVLL 359 + + + R+ + Sbjct: 353 --TSAVTIFEQTITDPKRNTAM 372 >gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] Length = 215 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 69/217 (31%), Gaps = 46/217 (21%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G++ Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT-VKAQ 64 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R L +L+ D+++P F ++ K LRD A Sbjct: 65 IWDTAGQERYRAITSAYYR----GALGALLVYDVTKPTTF-ENVSRWLKELRDHAD---- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 ++++G K D+ +R Sbjct: 116 ------------------------------SNIVIMLIGNKTDL-----KHLRAVATEDA 140 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSP 266 +S A G A + S + TI + Sbjct: 141 QSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIV 177 >gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis] Length = 217 Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 74/251 (29%), Gaps = 51/251 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + G + Sbjct: 143 AEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK----QISDRSGHEESPGN-NVVD 197 Query: 293 IGDTGAQSVER 303 I +R Sbjct: 198 ISLPPTTDSQR 208 >gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster] Length = 214 Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 76/265 (28%), Gaps = 68/265 (25%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + + T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRSVPTDEAKLF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + I + + + Sbjct: 143 AERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ----------------------KQ 180 Query: 293 IGDTGAQSVERIGATFGMEVPQLQL 317 I D V R ++V Sbjct: 181 IRDPPEGDVIRPSNVEPIDVKPTVT 205 >gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti] gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti] gi|108874607|gb|EAT38832.1| rab11 [Aedes aegypti] Length = 215 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 29/247 (11%), Positives = 73/247 (29%), Gaps = 52/247 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEAKGF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + I + + + + + Sbjct: 143 AERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ--KQIRDPPEGSVIRP----NLEN 196 Query: 293 IGDTGAQ 299 I Sbjct: 197 IDVKPTN 203 >gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans] Length = 215 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 33/272 (12%), Positives = 80/272 (29%), Gaps = 68/272 (25%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ + GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R ++ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEAKNF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + S + Sbjct: 143 AERNALSFIETSALDSTNVETAFQNILTEIYRIV----------------------SXKQ 180 Query: 293 IGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 I D R ++V + K+ Sbjct: 181 IRDPPEGETIRPQNVEAIDVKPTVNTESVRKQ 212 >gi|52345666|ref|NP_001004880.1| MGC88884 protein [Xenopus tropicalis] gi|49671143|gb|AAH75268.1| MGC88884 protein [Xenopus tropicalis] Length = 218 Score = 191 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 31/256 (12%), Positives = 77/256 (30%), Gaps = 53/256 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP-------LCIWF 285 A + + S + I + + + + + + Sbjct: 143 AEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADRAAHEDSPGNNVVDISVTP 202 Query: 286 GTDSWSKIGDTGAQSV 301 D I Q++ Sbjct: 203 TMDGQRSIKLQCCQNL 218 >gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980] gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980] Length = 213 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 67/218 (30%), Gaps = 46/218 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ K+ +W+ Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKT-IKAQIWD 64 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+S+ Q + ++ K LRD A Sbjct: 65 TAGQERYRAITSAYYR----GAVGALLVYDISKHQT-YENVTRWLKELRDHAD------- 112 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + Sbjct: 113 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTEEAKQF 140 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 A + + S ++ I + + Sbjct: 141 ASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKA 178 >gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10] gi|150854657|gb|EDN29849.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10] Length = 213 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 67/218 (30%), Gaps = 46/218 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ K+ +W+ Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKT-IKAQIWD 64 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+S+ Q + ++ K LRD A Sbjct: 65 TAGQERYRAITSAYYR----GAVGALLVYDISKHQT-YENVTRWLKELRDHAD------- 112 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + Sbjct: 113 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTEEAKQF 140 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 A + + S ++ I + + Sbjct: 141 ASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKA 178 >gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii] gi|3025293|sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 gi|806728|gb|AAA82729.1| YptC6 gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii] Length = 216 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 75/244 (30%), Gaps = 49/244 (20%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKS 104 + ++++G VGK+ +++F + ++ T+ +E++ GK+ Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKT 60 Query: 105 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 164 +W+ + + R + +L+ D+++ F ++E K LRD A Sbjct: 61 -IKAQIWDTAGQERYRAITSAYYR----GAVGALLVYDITKSVTF-ENVERWLKELRDHA 114 Query: 165 QQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKH 224 +++VG K D+ +R Sbjct: 115 D----------------------------------SNIVIMLVGNKSDL-----KHLRDV 135 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 ++ G + + S + I + + + + + I Sbjct: 136 QTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVS---KKVLDSEDNRPKIG 192 Query: 285 FGTD 288 G D Sbjct: 193 EGRD 196 >gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus] gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus] Length = 217 Score = 191 bits (485), Expect = 8e-47, Method: Composition-based stats. Identities = 34/250 (13%), Positives = 78/250 (31%), Gaps = 50/250 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + N+P D+ Sbjct: 143 AEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQ-KQIRNDADNDP---SPSGDNVKA 198 Query: 293 IGDTGAQSVE 302 I S + Sbjct: 199 ISIAPTDSSD 208 >gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis] Length = 216 Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 73/248 (29%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARVF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 143 AEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDES----PGN-NVVD 197 Query: 293 IGDTGAQS 300 I Sbjct: 198 ISVPPTTD 205 >gi|42543204|pdb|1OIW|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gtpgammas gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp And Pi Length = 191 Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 46/211 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 26 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 84 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 L+ + R + +L+ D+++ + ++E K LRD A Sbjct: 85 TAGLERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 132 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 133 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 160 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 A G + + S + TI + Sbjct: 161 AEKNGLSFIETSALDSTNVEAAFQTILTEIY 191 >gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vinifera] Length = 215 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 74/238 (31%), Gaps = 48/238 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVM 108 ++++G VGK+ +++F + ++ T+ +E++ G++ Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT-VKA 63 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R L +L+ D+++P F ++ K LRD A Sbjct: 64 QIWDTAGQERYRAITSAYYR----GALGALLVYDVTKPTTF-ENVSRWLKELRDHAD--- 115 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 ++++G K D+ +R Sbjct: 116 -------------------------------SNIVIMLIGNKTDL-----KHLRAVATED 139 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFG 286 + A G + + S + TI + ++ D P I G Sbjct: 140 AQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRII--SKKTLSSDDPAPAGIKEG 195 >gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula] Length = 217 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 72/230 (31%), Gaps = 46/230 (20%) Query: 48 QLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQ 106 + ++++G VGK+ +++F + ++ T+ +E++ GK+ Sbjct: 2 SSKDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-I 60 Query: 107 VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ 166 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 61 KAQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD- 114 Query: 167 MMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTC 226 ++ VG K D+ +R Sbjct: 115 ---------------------------------SNIVIMAVGNKCDLRH-----LRAVPT 136 Query: 227 RCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 ++ + G + + S + I + + ++ V Sbjct: 137 EEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQSSTANDVP 186 >gi|148236881|ref|NP_001088852.1| hypothetical protein LOC496163 [Xenopus laevis] gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis] Length = 218 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 74/248 (29%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + + G + Sbjct: 143 AEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADRAAHEDS----PGN-NVVD 197 Query: 293 IGDTGAQS 300 I T Sbjct: 198 ISVTPTMD 205 >gi|94733945|emb|CAK04342.1| novel protein (zgc:55760) [Danio rerio] Length = 205 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 74/246 (30%), Gaps = 61/246 (24%) Query: 61 LVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNA 119 +++G VGK+ +++F + ++ T+ +E++ GK+ +W+ + Sbjct: 2 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWDTAGQERY 60 Query: 120 EQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL 179 + R + +L+ D+++ + ++E K LRD A Sbjct: 61 RAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------------- 102 Query: 180 EQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGA 239 +++VG K D+ +R R+ A + Sbjct: 103 ---------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAFAEKNNLS 136 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD-----SWSKIG 294 + S + I + + +VD G D + I Sbjct: 137 FIETSALDSTNVEEAFKNILTEIYRIVSQK---QMVDR-------PGHDESPGNNVVDIS 186 Query: 295 DTGAQS 300 Sbjct: 187 VPPTTD 192 >gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus] Length = 217 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 79/250 (31%), Gaps = 50/250 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S +V I + + + N+P D+ Sbjct: 143 AEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQ-KQIRNDADNDP---SPSGDNVKA 198 Query: 293 IGDTGAQSVE 302 I S + Sbjct: 199 ISIAPTDSSD 208 >gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana] Length = 204 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 77/244 (31%), Gaps = 51/244 (20%) Query: 62 VLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 ++G VGK+ +++F + ++ T+ +E++ GK+ +W+ + Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWDTAGQERYR 62 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 + R + +L+ D+++ + ++E + LRD A Q Sbjct: 63 AITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ-------------- 103 Query: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 +++VG K D+ +R ++ A G + Sbjct: 104 --------------------NIVIMLVGNKSDLRH-----LRAVPTDEAKAFAERNGLSF 138 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 + S + I + + +V + + I + +I Sbjct: 139 IETSALDSTNVETAFQNILTEIYRIVSQK---QIVILQKEILIRP--HNVEQIDVKPTGE 193 Query: 301 VERI 304 + Sbjct: 194 RGQW 197 >gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago truncatula] Length = 220 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 78/265 (29%), Gaps = 51/265 (19%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSG 102 R++ ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 2 SSRRRVGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEG 61 Query: 103 KSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 ++ +W+ + + R L +L+ D+++P F ++ K LRD Sbjct: 62 RT-VKAQIWDTAGQERYRAITSAYYR----GALGALLVYDVTKPTTF-DNVTRWLKELRD 115 Query: 163 TAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIR 222 A ++++G K D+ +R Sbjct: 116 HADA----------------------------------NIVIMLIGNKTDL-----KHLR 136 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 +S A G + + S + T + + S + Sbjct: 137 AVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTANEPAAAAN 196 Query: 283 IWFGTDSWSKIGDTGAQSVERIGAT 307 I G K G Sbjct: 197 IKEG-----KTIAIGGSETTNTNKP 216 >gi|15230422|ref|NP_187823.1| AtRABA4d (Arabidopsis Rab GTPase homolog A4d); GTP binding [Arabidopsis thaliana] gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana] gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana] gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana] Length = 222 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 71/250 (28%), Gaps = 55/250 (22%) Query: 58 RTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSL 116 ++++G VGKT + +F + ++ T+ +E+ +W+ Sbjct: 16 FKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTL-VIDNKTVKAQIWDTAGQ 74 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + R + +L+ D+++ Q F + + LR A + Sbjct: 75 ERYRAVTSAYYR----GAVGAMLVYDMTKRQSFDH-MAKWLEELRGHADK---------- 119 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 ++++G K D+ S +R + A Sbjct: 120 ------------------------NIVIMLIGNKCDLGS-----LRAVPTEDAQEFAQRE 150 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK---I 293 + S + TI + + + D + G S K I Sbjct: 151 NLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDDAD------GNSSLLKGTRI 204 Query: 294 GDTGAQSVER 303 Q + Sbjct: 205 IIPSEQESGK 214 >gi|159473186|ref|XP_001694720.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] gi|31376209|gb|AAO12154.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|33334344|gb|AAQ12259.1| dynein light intermediate chain [Chlamydomonas reinhardtii] gi|47680185|gb|AAT37069.1| dynein 1b light intermediate chain [Chlamydomonas reinhardtii] gi|158276532|gb|EDP02304.1| cytoplasmic dynein 1b light intermediate chain, D1bLIC [Chlamydomonas reinhardtii] Length = 427 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 69/362 (19%), Positives = 131/362 (36%), Gaps = 33/362 (9%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEH 83 A + I + E R+ + +GS+ GK+T +N+F Sbjct: 8 PGQAVKTPGSIWAKAIEHANEERKKPGADGRGDAFCYFVGSRAAGKSTLLNRFLYPTRAE 67 Query: 84 ATRPTLALEYSFGRRI--GSGKSPQVMNVWELGSLDNAEQLL----EVPMRTHGLQQLAV 137 +P+ +EY++ R+ + + ++WE+G + + ++ + + V Sbjct: 68 VPKPSEGIEYTYARKPAAFDHEKKDLAHIWEVGGSQEFAEEIVNSDQLFLTAKQVTTAVV 127 Query: 138 ILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE---LREILEQRTVERVGQQNKDS 194 ++++DLS P L + ++ EK + L E L QR ++ N+D Sbjct: 128 VIVVDLSDPAGVLPTLLYWVEQVKKKLGSTYEKFEKKGLQLPEQLRQRAKSKLYSANEDK 187 Query: 195 EKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYS---------- 244 + + ++I KYD F DP ++K R LR +AH G L + S Sbjct: 188 DTVYHSGISLVIAATKYDAFKNQDPEVKKVMSRVLRYIAHAHGAFLCYLSGLHGASEGSG 247 Query: 245 QKMPKLAKVLRDTICHLGFG--SPAHPFRSH-VVDFNEPLCIWFGTDSWSKIGDTGAQ-- 299 + L + HL F + +D P+ + G D++ +G +Q Sbjct: 248 AEDAALLDNFTRLMNHLIFTGLEKKPVLKMQPQIDHTGPIMVPAGFDTFKSVGRPRSQGE 307 Query: 300 -----SVERIGATFGMEVPQLQLEKQKLKETTDP--AKDPGFKELVIDEIRSQKNEELAG 352 + F P EK+ +KE +D +R +K +L Sbjct: 308 GTVAGGLAEWRELFEKMFPG-VREKEAKMSAKGAKFVIPEQYKEEEVDAVRQRKVTDLEN 366 Query: 353 LM 354 Sbjct: 367 FR 368 >gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3 gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3 gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3 Length = 172 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 71/217 (32%), Gaps = 46/217 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVM 108 + ++++G VGK+ +++F + ++ T+ +E++ GK+ Sbjct: 1 GSDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKA 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ L+ + R + +L+ D+++ + ++E K LRD A Sbjct: 60 QIWDTAGLERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD--- 111 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 +++VG K D+ +R Sbjct: 112 -------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDE 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 R+ A G + + S + TI + Sbjct: 136 ARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 172 >gi|3024528|sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris] Length = 214 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 73/222 (32%), Gaps = 46/222 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 I+++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT-VKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ Q F +++ + LRD A Sbjct: 68 TAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-DNVQRWLRELRDHAD------- 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++ G K D+ +R + +++ Sbjct: 116 ---------------------------SNIVIMMAGNKSDL-----KHLRAVSEEDGQAL 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 A G + L S + TI + + + Sbjct: 144 AEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQ 185 >gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella] Length = 218 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 79/259 (30%), Gaps = 61/259 (23%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 ++ VG K D+ +R ++ Sbjct: 115 ---------------------------SNIVIMQVGNKSDLRH-----LRAVPTDEAKAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S +V I + + DS + Sbjct: 143 AEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQIH---------------DSPTS 187 Query: 293 IGDTGAQSVERIGATFGME 311 G + +V+ I + Sbjct: 188 DGSHPSNNVQTIHVAPTTD 206 >gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa] gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A] Length = 214 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 28/218 (12%), Positives = 67/218 (30%), Gaps = 46/218 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ K+ +W+ Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKT-IKAQIWD 64 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+S+ F ++ K LRD A Q Sbjct: 65 TAGQERYRAITSAYYR----GAVGALLVYDISKGVTF-ENVNRWLKELRDHADQ------ 113 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + Sbjct: 114 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTEDAKKF 140 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 A + + S ++ I + + Sbjct: 141 AEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKN 178 >gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe] gi|141306|sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 (RAB) gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe] gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe] gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe] Length = 214 Score = 188 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 25/224 (11%), Positives = 66/224 (29%), Gaps = 46/224 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 +++G VGK+ + +F + ++ T+ +E++ +W+ Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNI-VLDNKKIKAQIWD 65 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +++ D+++ F ++ K LR+ A Sbjct: 66 TAGQERYRAITSAYYR----GAVGALIVYDITKQSSF-DNVGRWLKELREHAD------- 113 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + ++ Sbjct: 114 ---------------------------SNIVIMLVGNKTDLLH-----LRAVSTEEAQAF 141 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 A + + S + T+ F ++ D Sbjct: 142 AAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDD 185 >gi|41056251|ref|NP_956417.1| hypothetical protein LOC386994 [Danio rerio] gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio] Length = 216 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 29/216 (13%), Positives = 70/216 (32%), Gaps = 46/216 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKT-VKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + + E K L+D A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENAERWLKELQDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R ++ Sbjct: 115 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPMDEAKAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAH 268 A G + L S ++ TI + + Sbjct: 143 AEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQ 178 >gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HOMOLOG A2A); GTP binding [Arabidopsis thaliana] gi|3024516|sp|O04486|RB11C_ARATH Ras-related protein Rab11C gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene. [Arabidopsis thaliana] gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana] gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana] gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana] gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana] Length = 217 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 72/232 (31%), Gaps = 48/232 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVM 108 ++++G VGK+ +++F + ++ T+ +E++ G++ Sbjct: 5 PDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT-VKA 63 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R L +L+ D+++P F ++ K LRD A Sbjct: 64 QIWDTAGQERYRAITSAYYR----GALGALLVYDVTKPTTF-ENVSRWLKELRDHAD--- 115 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 ++++G K D+ +R Sbjct: 116 -------------------------------SNIVIMLIGNKTDL-----KHLRAVATED 139 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP 280 +S A G + + S + TI + +S D Sbjct: 140 AQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRII--SKKSISSDQTTA 189 >gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi] Length = 215 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 78/254 (30%), Gaps = 52/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKT-VKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHVT-YENVERWLKELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R ++ Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEAKAY 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + D + G++ Sbjct: 143 AEKNQLSFIETSALDSTNVEAAFTNILTEIY--KSVSVKHVGGDNRAAIS-TPGSNG--- 196 Query: 293 IGDTGAQSVERIGA 306 I + + Sbjct: 197 IVISPTAEPQTKKQ 210 >gi|147844837|emb|CAN83336.1| hypothetical protein [Vitis vinifera] gi|157344444|emb|CAO69827.1| unnamed protein product [Vitis vinifera] Length = 216 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 28/248 (11%), Positives = 74/248 (29%), Gaps = 53/248 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ + +W+ Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRV-DEKVVKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F +++ K LRD Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVDRWLKELRDHTD------- 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + ++ Sbjct: 117 ---------------------------SSIVIMLVGNKADLGH-----LRAVSTEDAKAY 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF-----RSHVVDFNEPLCIWFGT 287 A + S + + + + + V + + + G Sbjct: 145 AEKESTFFIETSALESTNVENAFTEVLTQIYHVVSRKALETGDEAATVPKGQTINV--GK 202 Query: 288 DSWSKIGD 295 D S I Sbjct: 203 DDVSAIKI 210 >gi|15222396|ref|NP_172221.1| AtRABA2b (Arabidopsis Rab GTPase homolog A2b); GTP binding [Arabidopsis thaliana] Length = 214 Score = 186 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 32/222 (14%), Positives = 71/222 (31%), Gaps = 46/222 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 I+++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT-VKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ Q F ++ + LRD A Sbjct: 68 TAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-ENVLRWLRELRDHAD------- 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++ G K D+ +R RS+ Sbjct: 116 ---------------------------SNIVIMMAGNKSDLNH-----LRSVADEDGRSL 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 A G + L S + TI + + + Sbjct: 144 AEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQ 185 >gi|3024501|sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus] Length = 216 Score = 186 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 I+++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT-VKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ Q F +++ + LRD A Sbjct: 68 TAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-DNVQRWLRELRDHAD------- 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++ G K D+ +R + ++ Sbjct: 116 ---------------------------SNIVIMMAGNKSDLNH-----LRAVSEDDGGAL 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 + G + L S + TI + + + Sbjct: 144 SEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185 >gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis] Length = 217 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 26/233 (11%), Positives = 70/233 (30%), Gaps = 49/233 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ K +W+ Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKV-IKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E K LRD Sbjct: 68 TAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTDA------ 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + ++ Sbjct: 117 ----------------------------NIVIMLVGNKADLRH-----LRAVSIEDGKAF 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 A + S + + + + + + +P + Sbjct: 144 AERENTYFMETSALESTNVENAFTEVLSQIYRIVS---KKALDVGEDPAAVPS 193 >gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15] Length = 215 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 33/248 (13%), Positives = 77/248 (31%), Gaps = 53/248 (21%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 +P T +++G VGK+ +++F + ++ T+ +E++ K+ +W Sbjct: 8 VSPACHTFVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKT-IKAQIW 66 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+S+ Q + ++ K LRD A Sbjct: 67 DTAGQERYRAITSAYYR----GAVGALLVYDISKHQT-YENVTRWLKELRDHAD------ 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R + Sbjct: 116 ----------------------------SNIVIMLVGNKSDLRH-----LRAVPTEEAKQ 142 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF-------RSHVVDFNEPLCIW 284 A + + S ++ I + + ++ + + L I Sbjct: 143 FASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGEGGQNVLGGERKVLEIS 202 Query: 285 FGTDSWSK 292 D K Sbjct: 203 KSADEGQK 210 >gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus] Length = 218 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 74/254 (29%), Gaps = 51/254 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ R+ Sbjct: 115 ---------------------------SNIVILLVGNKSDLRHLRAV----CPLTEARAF 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G + Sbjct: 144 AERH-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PGN-NVVD 197 Query: 293 IGDTGAQSVERIGA 306 I ++ Sbjct: 198 ISVPPTTDGQKPNK 211 >gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab- Binding Domain gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab- Binding Domain Length = 167 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 69/211 (32%), Gaps = 46/211 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 60 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 L+ + R + +L+ D+++ + ++E K LRD A Sbjct: 61 TAGLERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 108 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + +VG K D+ +R R+ Sbjct: 109 ---------------------------SNIVIXLVGNKSDLRH-----LRAVPTDEARAF 136 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 A G + + S + TI + Sbjct: 137 AEKNGLSFIETSALDSTNVEAAFQTILTEIY 167 >gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa (japonica cultivar-group)] gi|109940138|sp|Q40723|RGP2_ORYSJ Ras-related protein RGP2 (GTP-binding regulatory protein RGP2) gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa (japonica cultivar-group)] gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa (japonica cultivar-group)] gi|125551654|gb|EAY97363.1| hypothetical protein OsI_018596 [Oryza sativa (indica cultivar-group)] gi|125593585|gb|EAZ33644.1| hypothetical protein OsJ_017127 [Oryza sativa (japonica cultivar-group)] gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa (indica cultivar-group)] Length = 217 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 72/225 (32%), Gaps = 50/225 (22%) Query: 50 EATTTPKE----RTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKS 104 E ++++G VGK+ +++F + ++ T+ +E++ GK+ Sbjct: 1 MGGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60 Query: 105 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 164 +W+ + + R + +L+ D+++ Q F ++ + LRD A Sbjct: 61 -IKAQIWDTAGQERYRAITSAYYR----GAVGALLVYDITKRQSF-DNVHRWLRELRDHA 114 Query: 165 QQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKH 224 +++VG K D+ +R Sbjct: 115 D----------------------------------SSIVIMMVGNKSDLIH-----LRAV 135 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 + +++A G L S + TI +G Sbjct: 136 SEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRK 180 >gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori] gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori] Length = 213 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 77/254 (30%), Gaps = 68/254 (26%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK++ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLS-YENVERWLRELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R ++ Sbjct: 116 ----------------------------NILIMLVGNKSDLRH-----LRSIPTEEAKAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A G + + S + I + + + Sbjct: 143 AEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQR----------------------Q 180 Query: 293 IGDTGAQSVERIGA 306 + D V R A Sbjct: 181 MRDPPEGDVIRPDA 194 >gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2 gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2 gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family Interacting Protein 2 Length = 173 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 69/211 (32%), Gaps = 46/211 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 L+ + R + +L+ D+++ + ++E K LRD A Sbjct: 67 TAGLERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 114 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 + +VG K D+ +R R+ Sbjct: 115 ---------------------------SNIVIXLVGNKSDLRH-----LRAVPTDEARAF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 A G + + S + TI + Sbjct: 143 AEKNGLSFIETSALDSTNVEAAFQTILTEIY 173 >gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (japonica cultivar-group)] gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa (japonica cultivar-group)] gi|125550513|gb|EAY96222.1| hypothetical protein OsI_017455 [Oryza sativa (indica cultivar-group)] gi|125592518|gb|EAZ32577.1| hypothetical protein OsJ_016060 [Oryza sativa (japonica cultivar-group)] Length = 220 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 34/253 (13%), Positives = 75/253 (29%), Gaps = 56/253 (22%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 8 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEG-KIIKAQ 66 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R L +L+ D+S+P F ++ K LRD A Sbjct: 67 IWDTAGQERYRAITSAYYR----GALGAVLVYDVSKPTTF-DNISRWLKELRDHADA--- 118 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 119 -------------------------------NIRIMLVGNKTDL-----KHLRAVATDDA 142 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH---------VVDFNEP 280 A G + + S + I + + + + V + Sbjct: 143 HKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVASDEGGAGAAGGVKEGKT 202 Query: 281 LCIWFG-TDSWSK 292 + + G +S K Sbjct: 203 INVAAGDANSEKK 215 >gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa (japonica cultivar-group)] gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa (japonica cultivar-group)] gi|125595229|gb|EAZ35288.1| hypothetical protein OsJ_018771 [Oryza sativa (japonica cultivar-group)] Length = 217 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 24/235 (10%), Positives = 71/235 (30%), Gaps = 49/235 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ K +W+ Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKV-VKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +++ D+++ F ++E + L+D Sbjct: 68 TAGQERYRAITSAYYR----GAVGALVVYDVTRHVTF-ENVERWMRELKDHTDA------ 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + ++ Sbjct: 117 ----------------------------NIVIMLVGNKADLRH-----LRAVSTEDAKAF 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 A + S + + + + + + ++P G Sbjct: 144 AEKENTFFMETSALESMNVENAFTEVLTQIYHVVS---KKALDIGDDPAAPPKGQ 195 >gi|147789804|emb|CAN62934.1| hypothetical protein [Vitis vinifera] gi|157348632|emb|CAO23524.1| unnamed protein product [Vitis vinifera] Length = 223 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 29/248 (11%), Positives = 74/248 (29%), Gaps = 56/248 (22%) Query: 58 RTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSL 116 ++++G VGK+ + +F + ++ T+ +E+ + +W+ Sbjct: 16 FKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAI-DQKAVKAQIWDTAGQ 74 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + R + +L+ D+++ Q F + + LR A + Sbjct: 75 ERYRAVTSAYYR----GAVGAMLVYDMTKRQSFDH-MARWLEELRGHADK---------- 119 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 ++++G K D+ S +R + A Sbjct: 120 ------------------------NIVIMLIGNKSDLGS-----LRAVPTEDAQEFAERE 150 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP----------LCIWFG 286 + S + T+ + + + D + + + G Sbjct: 151 NLFFMETSALEATNVETAFLTVLTDIYKIISKKTLTANTDTDSTGSSTLLKGTKIIVPGG 210 Query: 287 TDSWSKIG 294 DS ++ G Sbjct: 211 PDSAAQKG 218 >gi|125951003|ref|XP_001345672.1| PREDICTED: hypothetical protein [Danio rerio] Length = 217 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 31/239 (12%), Positives = 71/239 (29%), Gaps = 51/239 (21%) Query: 63 LGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQ 121 +G VGK+ +++F + ++ T+ +E++ GK+ +W+ + Sbjct: 16 IGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWDTAGQERYRA 74 Query: 122 LLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQ 181 + R + +L+ D+++ + ++E K LRD A Sbjct: 75 ITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN--------------- 114 Query: 182 RTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALL 241 +++VG K D+ +R R+ A + + Sbjct: 115 -------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAFAEKNNLSFI 150 Query: 242 FYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 S + I + + + +E G + I Sbjct: 151 ETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHDES----PGN-NVVDISVPPTTD 204 >gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding [Arabidopsis thaliana] gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana] gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana] gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana] Length = 217 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 26/235 (11%), Positives = 69/235 (29%), Gaps = 49/235 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ +W+ Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD-KIVKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E K LRD Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTDA------ 117 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 ++ VG K D+ +R + ++ Sbjct: 118 ----------------------------NIVIMFVGNKADLRH-----LRAVSTEDAKAF 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 A + S + + + + + ++P + G Sbjct: 145 AERENTFFMETSALESMNVENAFTEVLSQIYRVVSRK---ALDIGDDPAALPKGQ 196 >gi|157358689|emb|CAO66374.1| unnamed protein product [Vitis vinifera] Length = 217 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 27/235 (11%), Positives = 71/235 (30%), Gaps = 49/235 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ K +W+ Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV-VKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E K LRD Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTD------- 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + ++ Sbjct: 117 ---------------------------SNIVIMLVGNKADLRH-----LRAVSTEDAKAF 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 A + S + + + + + ++P + G Sbjct: 145 AERENNFFMETSALESMNVENAFTEVLTQIYRVVSRK---ALDIGDDPAALPKGQ 196 >gi|157344192|emb|CAO69125.1| unnamed protein product [Vitis vinifera] Length = 215 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 I+++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT-VKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ Q F +++ + LRD A Sbjct: 68 TAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-ENVQRWLRELRDHAD------- 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++ G K D+ +R + + + Sbjct: 116 ---------------------------SNIVIMMAGNKSDLNH-----LRAVSGDDAQIL 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 A G + L S + TI + + + Sbjct: 144 AEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185 >gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis] Length = 203 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 32/245 (13%), Positives = 76/245 (31%), Gaps = 51/245 (20%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ + Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWDTAGQER 59 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREI 178 + R + +L+ D+++ + ++E K LRD A Sbjct: 60 YRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------------ 102 Query: 179 LEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGG 238 +++VG K D+ +R R+ A Sbjct: 103 ----------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAFAEKNTL 135 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA 298 + + S + I + + + +E G + I Sbjct: 136 SFIETSALDSTKVEEAFKNILTEIYRIVSQKQIADRSAHDES----PGN-NVVDISLPPT 190 Query: 299 QSVER 303 +R Sbjct: 191 TDSQR 195 >gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa (japonica cultivar-group)] gi|446772|prf||1912297A rgp2 gene Length = 217 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 72/223 (32%), Gaps = 50/223 (22%) Query: 50 EATTTPKE----RTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKS 104 E ++++G VGK+ +++F + ++ T+ +E++ GK+ Sbjct: 1 MGGRVDHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKT 60 Query: 105 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 164 +W+ + + R + +L+ D+++ Q F ++ + LRD A Sbjct: 61 -IKAQIWDTAGQERYRAITSAYYR----GAVGALLVYDITKRQSF-DNVHRWLRELRDHA 114 Query: 165 QQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKH 224 +++VG K D+ +R Sbjct: 115 D----------------------------------SSIVIMMVGNKSDLIH-----LRAV 135 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA 267 + +++A G L S + TI +G Sbjct: 136 SEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVN 178 >gi|15238392|ref|NP_201330.1| AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding [Arabidopsis thaliana] gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana] gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana] gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana] gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana] Length = 226 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 31/242 (12%), Positives = 68/242 (28%), Gaps = 49/242 (20%) Query: 58 RTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSL 116 ++++G VGK+ + ++ D ++ T+ +E+ + +W+ Sbjct: 18 FKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDH-KSVKAQIWDTAGQ 76 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + R + +L+ D+++ Q F + + LR A + Sbjct: 77 ERYRAVTSAYYR----GAVGAMLVYDITRRQTFDH-IPRWLEELRAHADK---------- 121 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 +I++G K D+ R + A Sbjct: 122 ------------------------NIVIILIGNKSDLV-----DQRAIPTEDAKEFAEKE 152 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT 296 G L S + T+ F + D G+ + KI Sbjct: 153 GLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASEDQENG---NPGSLAGKKIDIV 209 Query: 297 GA 298 Sbjct: 210 PG 211 >gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] gi|89300006|gb|EAR97994.1| hypothetical protein TTHERM_00283830 [Tetrahymena thermophila SB210] Length = 487 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 152/372 (40%), Gaps = 35/372 (9%) Query: 12 QRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKT 71 R Q+ + S D+ E + + E+T++V+G K GKT Sbjct: 2 NRNQEDNEQENNEVNKGDRSNIDLWSHAEESELKQGFA----KNLEKTLVVIGDKGSGKT 57 Query: 72 TA--INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRT 129 T I K + + PT+ L+Y + RR + + +++ +ELG +++ +P+ Sbjct: 58 TFVNILKNMQQVDDRYIPTVGLDYQYVRRTNANRKE-LIHSYELGGGKEQSKMITIPISK 116 Query: 130 HGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQ--MMEKVTPELREIL---EQRTV 184 + IL+LDLS+P + ++ +R Q + TPE + E Sbjct: 117 QNFRDAFYILVLDLSKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQ 176 Query: 185 ERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYS 244 R + D ++ LP I++G KYD+F D RK R LR +AH+ G +L F S Sbjct: 177 ARFES-HPDKNRVKILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFAS 235 Query: 245 Q-------------KMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 + L + +R + + FG + + + P+ I D + Sbjct: 236 SNTQIHVLFNQHNKRNNDLFQNVRSIMNNALFG--KTLAQYYQSEHLRPIEISLSKDELA 293 Query: 292 KIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDP-----GFKELVIDEIRSQK 346 K+G F + + E + + D ++DP F E ID IR++K Sbjct: 294 KMGLPQISGNMTYLEAFKKVIQETFPENKGAQ--NDASQDPLRLMEKFPEARIDSIRAEK 351 Query: 347 NEELAGLMRDVL 358 ++E+ + ++ + Sbjct: 352 DKEMKAISKEFM 363 >gi|85082713|ref|XP_956972.1| hypothetical protein ( (NM_017382) RAB11a, member RAS oncogene family [Mus musculus] sp|Q9JLX1|R11A_MOUSE RAS-RELATED PROTEIN RAB-11A gb|AAF36458.1|AF127669_1 (AF127669) small GTPase [Mus musculus] ) [Neurospora crassa OR74A] Length = 214 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 67/212 (31%), Gaps = 46/212 (21%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 ++++G VGK+ +++F + ++ T+ +E++ K+ +W+ + Sbjct: 12 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKT-IKAQIWDTAGQER 70 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREI 178 + R + +L+ D+S+ F ++ K LRD A Q Sbjct: 71 YRAITSAYYR----GAVGALLVYDISKGVTF-ENVNRWLKELRDHADQ------------ 113 Query: 179 LEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGG 238 +++VG K D+ +R + A Sbjct: 114 ----------------------NIVIMLVGNKSDLRH-----LRAVPTEDAKKFAEENHL 146 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 + + S ++ I + + Sbjct: 147 SFIETSALDATNVELAFQNILTEIYKIVSTKN 178 >gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum] Length = 218 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 27/224 (12%), Positives = 67/224 (29%), Gaps = 46/224 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK +W+ Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKV-IKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E + LRD Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHSTF-ENVERWLRELRDHTD------- 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 V++VG K D+ + + +S Sbjct: 117 ---------------------------PNIVVMLVGNKSDLRH-----LVAVSTEDGKSF 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 A + S ++ + + + D Sbjct: 145 AEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSKKAMETSDD 188 >gi|15233873|ref|NP_193578.1| AtRABA1e (Arabidopsis Rab GTPase homolog A1e); GTP binding [Arabidopsis thaliana] gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis thaliana] gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis thaliana] gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana] gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana] Length = 217 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 69/244 (28%), Gaps = 57/244 (23%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ + +W+ Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHV-DEKIIKAQLWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E K LRD Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDITRHITF-ENVERWLKELRDHTDA------ 117 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R RS Sbjct: 118 ----------------------------NVVIMLVGNKADLRH-----LRAVPTEEARSF 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGF-----------GSPAHPFRSHVVDFNEPL 281 + + S + + + G P + +D Sbjct: 145 SERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGTGDPMSLPKGQTIDIGNKD 204 Query: 282 CIWF 285 + Sbjct: 205 DVTA 208 >gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa (japonica cultivar-group)] gi|109940140|sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa] gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa (japonica cultivar-group)] gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_022529 [Oryza sativa (indica cultivar-group)] Length = 217 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 27/224 (12%), Positives = 65/224 (29%), Gaps = 46/224 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK +W+ Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV-VKAQIWD 69 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E K LRD Sbjct: 70 TAGQERYRAITSAYYR----GAVGALLVYDVTRHSTF-ENVERWLKELRDHTD------- 117 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 V++VG K D+ + ++ Sbjct: 118 ---------------------------PNIVVMLVGNKSDLRH-----LVAVQTDEGKAF 145 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 A + S + + + + D Sbjct: 146 AERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDD 189 >gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa (japonica cultivar-group)] gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa (japonica cultivar-group)] Length = 215 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 72/225 (32%), Gaps = 46/225 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 I+++G VGK+ +++F + ++ T+ +E++ G++ Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQT-IKAQ 64 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ Q F +++ + LRD A Sbjct: 65 IWDTAGQERYRAITSAYYR----GAVGALLVYDITKKQTF-ENIQRWLRELRDHAD---- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 ------------------------------SNIVIMMVGNKSDLNH-----LRSVPEEDG 140 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 +++A G + L S + TI + + Sbjct: 141 QALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQ 185 >gi|5902803|sp|P28188|ARA5_ARATH Ras-related protein ARA-5 gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana] Length = 258 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 28/241 (11%), Positives = 67/241 (27%), Gaps = 47/241 (19%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQL-EATTTPKERTILVLGSKCVGKTTAINKFFD-RE 81 + +D+ +A R +L++G VGK+ + +F D Sbjct: 29 RERKSEKRERDLWLCIARCSSSHRSKTMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSY 88 Query: 82 EHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 + T+ +++ + +W+ + + R +I++ Sbjct: 89 VESYISTIGVDFKIRTVE-QDGKTIKLQIWDTAGQERFRTITSSYYR----GAHGIIIVY 143 Query: 142 DLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLP 201 D++ + F +++ + A + K+ Sbjct: 144 DVTDEESF-NNVKQWLSEIDRYASDNVNKL------------------------------ 172 Query: 202 FPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHL 261 +VG K D+ R ++ A IG + S K + + Sbjct: 173 ----LVGNKSDL-----TENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSAS 223 Query: 262 G 262 Sbjct: 224 I 224 >gi|17507543|ref|NP_490675.1| RAB family member (rab-11.1) [Caenorhabditis elegans] gi|2088715|gb|AAB54158.1| Rab family protein 11.1 [Caenorhabditis elegans] Length = 211 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 75/246 (30%), Gaps = 54/246 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKT-VKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E K LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHVT-YENVERWLKELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEAKIY 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDF------NEPLCIWFG 286 A + + S + I + + + D + + Sbjct: 143 AERNQLSFIETSALDSTNVEAAFTNILTEIY--KSVSNKHVGTDRQGYGGGSGTIIPSPA 200 Query: 287 TDSWSK 292 +D K Sbjct: 201 SDPPKK 206 >gi|3024504|sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B gi|623578|gb|AAA74113.1| putative Length = 217 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 27/235 (11%), Positives = 68/235 (28%), Gaps = 49/235 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ +W+ Sbjct: 11 YDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDD-KIVKAQIWD 69 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +++ D+++ F ++E K LRD Q Sbjct: 70 TAGQERYRAITSAYYR----GAVGALVVYDITRHVTF-ENVERWLKELRDHTDQ------ 118 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + ++ Sbjct: 119 ----------------------------NIVIMLVGNKADLRH-----LRAVSTEDAKAF 145 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 A + S + + + D P + G Sbjct: 146 AERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDD---PAALPKGQ 197 >gi|147777473|emb|CAN62732.1| hypothetical protein [Vitis vinifera] gi|157337221|emb|CAO21567.1| unnamed protein product [Vitis vinifera] Length = 217 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 70/217 (32%), Gaps = 46/217 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 I+++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKT-VKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ Q F +++ + LRD A Sbjct: 68 TAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-DNVQRWLRELRDHAD------- 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++ G K D+ +R + + + Sbjct: 116 ---------------------------SNIVIMMAGNKCDL-----KHLRAVSEEDGQGL 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 A + L S + TI + + Sbjct: 144 AEREELSFLETSALEATNIEKAFQTILTEIYHIISKK 180 >gi|3024500|sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus] Length = 226 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 66/217 (30%), Gaps = 46/217 (21%) Query: 58 RTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSL 116 ++++G VGK+ + +F + ++ T+ +E+ + K+ +W+ Sbjct: 18 FKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKT-VKAQIWDTAGQ 76 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + R + +L+ D+++ Q F + + LR+ A + Sbjct: 77 ERYRAVTSAYYR----GAVGAMLVYDITKRQTFDH-IPRWLEELRNHADK---------- 121 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 +I++G K D+ + R + A Sbjct: 122 ------------------------NIVIILIGNKCDLVN-----QRDVPTEDAKEFAEKE 152 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 G L S + T+ + + Sbjct: 153 GLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAA 189 >gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa (japonica cultivar-group)] gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa (japonica cultivar-group)] Length = 223 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 67/222 (30%), Gaps = 46/222 (20%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQV 107 I+++G VGK+ +++F + ++ T+ +E++ G Sbjct: 10 QGGDEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEG-KIVK 68 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 +W+ + + R + +L+ D+++ F +++ K LRD A Sbjct: 69 AQIWDTAGQERYRAITSAYYR----GAVGALLVYDVTKATTF-ENVKRWLKELRDHAD-- 121 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 V+++G K D+ +R + Sbjct: 122 --------------------------------SNIVVMLIGNKIDL-----KHLRSVSLE 144 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 S A G + + S T+ + + Sbjct: 145 DATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKK 186 >gi|15237828|ref|NP_200723.1| AtRABA2d (Arabidopsis Rab GTPase homolog A2d); GTP binding [Arabidopsis thaliana] gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana] gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana] gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana] Length = 217 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 70/217 (32%), Gaps = 46/217 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 I+++G VGKT +++F + ++ T+ +E++ GK+ +W+ Sbjct: 9 YDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT-VKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ Q F ++ + LRD A Sbjct: 68 TAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-DNVLRWLRELRDHAD------- 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++ G K D+ +R +++ Sbjct: 116 ---------------------------SNIVIMMAGNKADLNH-----LRSVAEEDGQTL 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 A G + L S + T+ + + Sbjct: 144 AETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180 >gi|115478587|ref|NP_001062887.1| Os09g0327100 [Oryza sativa (japonica cultivar-group)] gi|113631120|dbj|BAF24801.1| Os09g0327100 [Oryza sativa (japonica cultivar-group)] Length = 257 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 26/235 (11%), Positives = 70/235 (29%), Gaps = 49/235 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ K +W+ Sbjct: 50 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV-VKAQIWD 108 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +++ D+++ F ++E K LRD Sbjct: 109 TAGQERYRAITSAYYR----GAVGALVVYDVTRHVTF-ENVERWLKELRDHTDA------ 157 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + + Sbjct: 158 ----------------------------NIVIMLVGNKADLRH-----LRAVSVEDAKGF 184 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 A + S + + + + + + ++P G Sbjct: 185 AERESTFFMETSALESMNVESAFTEVLTQIYRVVS---KKALDIGDDPAAPPRGQ 236 >gi|158292354|ref|XP_313857.2| AGAP004559-PD [Anopheles gambiae str. PEST] gi|158292356|ref|XP_001238825.2| AGAP004559-PC [Anopheles gambiae str. PEST] gi|158292358|ref|XP_001238827.2| AGAP004559-PB [Anopheles gambiae str. PEST] gi|158292360|ref|XP_001238828.2| AGAP004559-PA [Anopheles gambiae str. PEST] gi|157017396|gb|EAA44610.2| AGAP004559-PD [Anopheles gambiae str. PEST] gi|157017397|gb|EAU76886.2| AGAP004559-PC [Anopheles gambiae str. PEST] gi|157017398|gb|EAU76888.2| AGAP004559-PB [Anopheles gambiae str. PEST] gi|157017399|gb|EAU76889.2| AGAP004559-PA [Anopheles gambiae str. PEST] Length = 183 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 67/208 (32%), Gaps = 46/208 (22%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWD 66 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 67 TAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ------ 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + Sbjct: 116 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEAKGF 142 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICH 260 A G + + S + I Sbjct: 143 AERNGLSFIETSALDSTNVETAFQNILT 170 >gi|15218719|ref|NP_174177.1| AtRABA1i (Arabidopsis Rab GTPase homolog A1i); GTP binding [Arabidopsis thaliana] gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana] gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana] Length = 218 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 28/229 (12%), Positives = 65/229 (28%), Gaps = 46/229 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 +++ G VGK+ +++F + H +R T+ +E++ +W+ Sbjct: 10 YDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDD-KIVKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E K LRD Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTDA------ 117 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + ++ Sbjct: 118 ----------------------------NIVIMLVGNKADLRH-----LRAISTEEAKAF 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPL 281 A + S + + + D L Sbjct: 145 AERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPTTAL 193 >gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis] Length = 224 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 29/228 (12%), Positives = 66/228 (28%), Gaps = 46/228 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 I+++G VGK+ + +F + ++ T+ +E+ + K+ Sbjct: 9 GPRIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKT-VKAQ 67 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ Q F + + LR A Sbjct: 68 IWDTAGQERYRAVTSAYYR----GAVGAMLVYDITKRQTFDH-VARWLEELRGHADN--- 119 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 ++++G K D+ + +R Sbjct: 120 -------------------------------NIVIMLIGNKCDLGN-----LRAVPIEDA 143 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDF 277 R A G L S + T+ + + D Sbjct: 144 REFAQREGLFFLETSALEAINVESAFLTVLTDIYRIISKKALIANDDQ 191 >gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa] Length = 217 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 27/224 (12%), Positives = 65/224 (29%), Gaps = 46/224 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK +W+ Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV-VKAQIWD 69 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E K LRD Sbjct: 70 TAGQERYRAITSAYYR----GAVGALLVYDVTRHSTF-ENVERWLKELRDHTD------- 117 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 V++VG K D+ + ++ Sbjct: 118 ---------------------------PNIVVMLVGNKSDLRH-----LVAVQTDEGKAF 145 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 A + S + + + + D Sbjct: 146 AERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDD 189 >gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana] Length = 224 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 74/243 (30%), Gaps = 51/243 (20%) Query: 58 RTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSL 116 ++++G VGK+ + +F D ++ T+ +E+ + +W+ Sbjct: 18 FKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIE-QKSIKAQIWDTAGQ 76 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + R + +L+ D+++ + F + + LR A + Sbjct: 77 ERYRAVTSAYYR----GAVGAMLVYDMTKRETFEH-IPRWLEELRAHADK---------- 121 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 +I++G K D+ R + A Sbjct: 122 ------------------------NIVIILIGNKSDL-----EDQRAVPTEDAKEFAEKE 152 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT 296 G L S + +T+ + + + D N P G+ + KI Sbjct: 153 GLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASECDSNNP-----GSLAGKKILIP 207 Query: 297 GAQ 299 G+ Sbjct: 208 GSG 210 >gi|15236081|ref|NP_195699.1| AtRABH1c (Arabidopsis Rab GTPase homolog H1c); GTP binding [Arabidopsis thaliana] gi|13272477|gb|AAK17177.1|AF325109_1 small GTP-binding protein-like [Arabidopsis thaliana] gi|14423430|gb|AAK62397.1|AF386952_1 small GTP-binding protein-like [Arabidopsis thaliana] gi|4490740|emb|CAB38902.1| small GTP-binding protein-like [Arabidopsis thaliana] gi|7271044|emb|CAB80652.1| small GTP-binding protein-like [Arabidopsis thaliana] gi|23197670|gb|AAN15362.1| small GTP-binding protein-like [Arabidopsis thaliana] Length = 214 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 72/221 (32%), Gaps = 45/221 (20%) Query: 57 ERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGS 115 + ++ LG + VGKT+ I +F +D+ + +PT+ +++ ++ + +W+ Sbjct: 9 KFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRT-VRLQLWDTAG 67 Query: 116 LDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPEL 175 + L+ +R + I++ D+S Q F + R+ Q Sbjct: 68 QERFRSLIPSYIRDSSV----AIVVYDVSNRQTFLNTSKWIEDVHRERGQ---------- 113 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 +++VG K D+ R+ + Sbjct: 114 ------------------------SNVIIVLVGNKTDLV-----EKRQVSISEGEDKGKE 144 Query: 236 IGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 G + S K K L I G ++ + D Sbjct: 145 YGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLATKSDD 185 >gi|157354705|emb|CAO48023.1| unnamed protein product [Vitis vinifera] Length = 218 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 26/224 (11%), Positives = 65/224 (29%), Gaps = 46/224 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK +W+ Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKV-IKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E + LRD Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHSTF-ENVERWLRELRDHTD------- 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 V+++G K D+ + + +S Sbjct: 117 ---------------------------PNIVVMLIGNKSDLRH-----LVAVSTEDGKSF 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 A + S + + + D Sbjct: 145 AERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMEAGDD 188 >gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum] gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba] gi|738937|prf||2001457E GTP-binding protein gi|1098295|prf||2115367C small GTP-binding protein Length = 217 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 26/246 (10%), Positives = 68/246 (27%), Gaps = 51/246 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ +W+ Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNV-DSKVIKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F +++ K LR+ Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHATF-ENVDRWLKELRNHTD------- 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 V++VG K D+ + + +S Sbjct: 117 ---------------------------SNIVVMLVGNKADLRH-----LVAVSTEDGKSY 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + S + + + ++ N + K Sbjct: 145 AEKESLYFMETSALEATNVENAFAEVLTQIYHIV--SKKTVEGAENGNASVPA---KGEK 199 Query: 293 IGDTGA 298 I Sbjct: 200 IDLKND 205 >gi|145610591|ref|XP_368165.2| hypothetical protein MGG_01079 [Magnaporthe grisea 70-15] gi|145017962|gb|EDK02241.1| hypothetical protein MGG_01079 [Magnaporthe grisea 70-15] Length = 237 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 27/208 (12%), Positives = 66/208 (31%), Gaps = 46/208 (22%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ K+ +W+ Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKT-IKAQIWD 64 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+S+ Q + ++ K LRD A Sbjct: 65 TAGQERYRAITSAYYR----GAVGALLVYDISKHQT-YENVTRWLKELRDHADA------ 113 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R ++ Sbjct: 114 ----------------------------NIVIMLVGNKSDLRH-----LRAVPTEEAKAF 140 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICH 260 A + + S ++ I Sbjct: 141 ASENHLSFIETSAFDASNVELAFQNILT 168 >gi|15236099|ref|NP_195709.1| ATGB3 (GTP-BINDING PROTEIN 3); GTP binding [Arabidopsis thaliana] gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana] gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana] gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana] gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana] Length = 224 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 74/243 (30%), Gaps = 51/243 (20%) Query: 58 RTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSL 116 ++++G VGK+ + +F D ++ T+ +E+ + +W+ Sbjct: 18 FKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIE-QKSIKAQIWDTAGQ 76 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + R + +L+ D+++ + F + + LR A + Sbjct: 77 ERYRAVTSAYYR----GAVGAMLVYDMTKRETFEH-IPRWLEELRAHADK---------- 121 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 +I++G K D+ R + A Sbjct: 122 ------------------------NIVIILIGNKSDL-----EDQRAVPTEDAKEFAEKE 152 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT 296 G L S + +T+ + + + D N P G+ + KI Sbjct: 153 GLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSNNP-----GSLAGKKILIP 207 Query: 297 GAQ 299 G+ Sbjct: 208 GSG 210 >gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa] Length = 215 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 26/237 (10%), Positives = 69/237 (29%), Gaps = 49/237 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ Sbjct: 7 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDD-KIVKAQ 65 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ F ++E K LRD Sbjct: 66 IWDTAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTDA--- 117 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 ++ VG K D+ +R + Sbjct: 118 -------------------------------NIVIMFVGNKADLRH-----LRAVSTEDA 141 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFG 286 ++ A + S + + + + + ++P + G Sbjct: 142 KAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSRK---ALDIGDDPAALPKG 195 >gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum] Length = 213 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 62/218 (28%), Gaps = 46/218 (21%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVMN 109 I+++G VGKT ++F + ++ T+ ++++ Sbjct: 5 DPQLGLLFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNV-VIDGKVVKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+S+P F L+ LR+ A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDISKPDTFLN-LDRWLDELREYASD--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------DVVIMLVGNKCDL-----KHLRCVLTEDA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA 267 + A G + + S + + + Sbjct: 140 KLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVS 177 >gi|125562255|gb|EAZ07703.1| hypothetical protein OsI_028935 [Oryza sativa (indica cultivar-group)] Length = 415 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 29/247 (11%), Positives = 78/247 (31%), Gaps = 41/247 (16%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSP 105 + E T ++++G VGK+ ++++ + ++ T+ +E+ Sbjct: 3 DESEGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSM-DIDGKD 61 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 +W+ + + R +L+ D+S+ F ++ + L Sbjct: 62 VKAQIWDTAGQERFRAVTSAYYR----GAFGALLVYDISRRSTF-DNVGRWLQEL----- 111 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 R + + + + D+ ++VG K D+ IR+ Sbjct: 112 ---------------NRCMTLIWKAHSDTT------VAKMLVGNKCDL-----DNIREVP 145 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP-LCIW 284 +++A G + S + + + + + + D + L + Sbjct: 146 VEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNV--SRKILNSDSYKAELSLN 203 Query: 285 FGTDSWS 291 W+ Sbjct: 204 RDWSKWA 210 >gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain family member (dli-1) [Caenorhabditis elegans] gi|21615437|emb|CAC42262.2| Hypothetical protein C39E9.14b [Caenorhabditis elegans] gi|21684779|emb|CAD37351.1| Hypothetical protein C39E9.14b [Caenorhabditis elegans] Length = 441 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 54/376 (14%), Positives = 105/376 (27%), Gaps = 70/376 (18%) Query: 4 PLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVL 63 PL F + + T + I L ++ +T ++VL Sbjct: 7 PLEFDDTANAVLPVLYSST------DEEVG-IWRELLASKKTNTNQGST-------VIVL 52 Query: 64 GSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS----------------PQV 107 G GK++ +++ D+ + +P L Y + ++ Sbjct: 53 GDNRSGKSSLLSR-LDKSDRTVKPKSLLGYRVLHVQNDARDASYAYQLGTAGANLNPSEL 111 Query: 108 MNV--WELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + + W L LL+ + + IL + P L+ + AQ Sbjct: 112 LQIPVWSLDGNAACASLLKHAL-PATPAEAIFILTASIDNPN-LIHSLKRWANVCTEQAQ 169 Query: 166 QMMEKVTPELREILEQRTVE----------------RVGQQN-----KDSEKLDPLPFPV 204 + K + +++ + ++ + Sbjct: 170 KHFTKEDLKAGRSQQEKMWQEYVDPVQSQMSTSVVGSFADEHNLLPLDQGTLTENCGVTF 229 Query: 205 IIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 ++V K D+ F LR +G L+F S K K ++L+ I H FG Sbjct: 230 MVVITKSDLGKEFTDAQFAKISIQLRKFCLSLGATLVFTSAKETKNIQLLQKYIVHRSFG 289 Query: 265 SPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 + + V E + + G D KI + A ++ Sbjct: 290 TAFTS--AAQVIERESIFVPAGWDGEKKIDIIRESIPDVDSALEP------------TRD 335 Query: 325 TTDPAKDPGFKELVID 340 P E D Sbjct: 336 KLRPVAKEQLIEAEED 351 >gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS] gi|90301160|gb|EAS30791.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS] Length = 227 Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats. Identities = 33/242 (13%), Positives = 74/242 (30%), Gaps = 52/242 (21%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 ++++G VGK+ +++F + ++ T+ +E++ K+ +W+ + Sbjct: 29 LVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKT-IKSQIWDTAGQER 87 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREI 178 + R + +L+ D+S+ Q + ++ K LRD A Sbjct: 88 YRAITSAYYR----GAVGALLVYDISKHQT-YENVTRWLKELRDHAD------------- 129 Query: 179 LEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGG 238 +++VG K D+ +R + A Sbjct: 130 ---------------------SNIVIMLVGNKSDLRH-----LRAVPTEEAKQFASDNNL 163 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVV------DFNEPLCIWFGTDSWSK 292 + + S ++ I F + + + I D SK Sbjct: 164 SFIETSALDASNVELAFQNILTEIFRIVSSKALDSGDSAQNPLSDRKVVEITKTQDPESK 223 Query: 293 IG 294 G Sbjct: 224 QG 225 >gi|15232652|ref|NP_190267.1| AtRABA2c/AtRab11A (Arabidopsis Rab GTPase homolog A2c); GTP binding [Arabidopsis thaliana] gi|3915842|sp|Q96283|RB11A_ARATH Ras-related protein Rab11A gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana] gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana] gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana] gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana] gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana] Length = 217 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 72/232 (31%), Gaps = 46/232 (19%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 I+++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT-IKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ Q F ++ + LRD A Sbjct: 68 TAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-DNVLRWLRELRDHAD------- 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++ G K D+ +R +S+ Sbjct: 116 ---------------------------SNIVIMMAGNKSDLNH-----LRSVAEEDGQSL 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 A G + L S + TI + + + I Sbjct: 144 AEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIP 195 >gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis] Length = 219 Score = 181 bits (461), Expect = 4e-44, Method: Composition-based stats. Identities = 29/229 (12%), Positives = 65/229 (28%), Gaps = 46/229 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVM 108 ++++G VGK+ +++F D ++ T+ +E+ + Sbjct: 3 MNPKIDYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEH-KSVKA 61 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R + +L+ D+++ Q F + + LR+ A Sbjct: 62 QIWDTAGQERYRAVTSAYYR----GAVGAMLVYDITKRQTFDH-VPRWLEELRNHADN-- 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 +++VG K D+ +R Sbjct: 115 --------------------------------NIVIMLVGNKCDL-----DNLRAVPTED 137 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDF 277 + A G L S + T+ F + D Sbjct: 138 AKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLIASQDQ 186 >gi|118488888|gb|ABK96253.1| unknown [Populus trichocarpa x Populus deltoides] Length = 201 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 27/226 (11%), Positives = 60/226 (26%), Gaps = 47/226 (20%) Query: 40 AEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRR 98 + +A +++LG VGK+ + +F + ++ T+ + Sbjct: 18 LNNSESGGVADAKNLR--VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTIGASFLSQTI 75 Query: 99 IGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYK 158 + +W+ + L + R +++ D++ P+ F + K Sbjct: 76 ALQDSTTIKFEIWDTAGQERYAALAPLYYR----GAAVAVIVYDITSPETF-NKAQYWVK 130 Query: 159 GLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFD 218 L+ + +VG K D+ Sbjct: 131 ELQKHGS----------------------------------PDIVMALVGNKADL----- 151 Query: 219 PIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 R+ + A G + S K L + I Sbjct: 152 HEKREVPTQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRLPR 197 >gi|147834751|emb|CAN75016.1| hypothetical protein [Vitis vinifera] gi|157338370|emb|CAO39414.1| unnamed protein product [Vitis vinifera] Length = 218 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 24/218 (11%), Positives = 65/218 (29%), Gaps = 46/218 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK +W+ Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKV-IKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F +++ K LR+ Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHATF-ENVDRWLKELRNHTD------- 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 V++VG K D+ + + ++ Sbjct: 117 ---------------------------PNIVVMLVGNKSDLRH-----LVAVSTEDGKTY 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 A + S + + + + Sbjct: 145 AERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKS 182 >gi|125604071|gb|EAZ43396.1| hypothetical protein OsJ_026879 [Oryza sativa (japonica cultivar-group)] Length = 415 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 29/247 (11%), Positives = 78/247 (31%), Gaps = 41/247 (16%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSP 105 + E T ++++G VGK+ ++++ + ++ T+ +E+ Sbjct: 3 DESEGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSM-DINGKD 61 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 +W+ + + R +L+ D+S+ F ++ + L Sbjct: 62 VKAQIWDTAGQERFRAVTSAYYR----GAFGALLVYDISRRSTF-DNVGRWLQEL----- 111 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 R + + + + D+ ++VG K D+ IR+ Sbjct: 112 ---------------NRCMTLIWKAHSDTT------VAKMLVGNKCDL-----DNIREVP 145 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP-LCIW 284 +++A G + S + + + + + + D + L + Sbjct: 146 VEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNV--SRKILNSDSYKAELSLN 203 Query: 285 FGTDSWS 291 W+ Sbjct: 204 RDWSKWA 210 >gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana] Length = 224 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 32/243 (13%), Positives = 73/243 (30%), Gaps = 51/243 (20%) Query: 58 RTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSL 116 ++++G VGK+ + +F D ++ T+ +E+ + +W+ Sbjct: 18 FKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIE-QKSIKAQIWDTAGQ 76 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + R + +L+ D+++ + F + + LR A + Sbjct: 77 ERYRAVTSAYYR----GAVGAMLVYDMTKRETFEH-IPRWLEELRAHADK---------- 121 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 +I++G K D+ R + A Sbjct: 122 ------------------------NIVIILIGNKSDL-----EDQRAVPTEDAKEFAEKE 152 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT 296 G L S + +T+ + + + D N P G+ + KI Sbjct: 153 GLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSNNP-----GSLAGKKILIP 207 Query: 297 GAQ 299 + Sbjct: 208 ASG 210 >gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii] Length = 219 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 45/211 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 I+++G VGK+ +++F D ++ T+ +E++ +W+ Sbjct: 8 YDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ Q F ++E K LRD A Sbjct: 68 TAGQERYRAITSAYYR----GAVGALLVYDITKRQSF-ENVERWLKELRDHAD------- 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + Sbjct: 116 ---------------------------PNIVILLVGNKSDL-----KHLRAVSVEEATKF 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 A+ A + S + I + Sbjct: 144 ANREHLAFIETSALDATNVEQAFHQILAEIY 174 >gi|147802502|emb|CAN73117.1| hypothetical protein [Vitis vinifera] Length = 215 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 30/222 (13%), Positives = 72/222 (32%), Gaps = 46/222 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 I+++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKT-VKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ Q F +++ + LRD A Sbjct: 68 TAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-ENVQRWLRELRDHAD------- 115 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++ G K D+ +R + + + Sbjct: 116 ---------------------------SNIVIMMAGNKSDLNH-----LRAVSGDDAQIL 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 A G + L S + TI + + + Sbjct: 144 AEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ 185 >gi|71024043|ref|XP_762251.1| hypothetical protein UM06104.1 [Ustilago maydis 521] gi|46101753|gb|EAK86986.1| hypothetical protein UM06104.1 [Ustilago maydis 521] Length = 219 Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 66/213 (30%), Gaps = 46/213 (21%) Query: 56 KERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 ++ ++ LG + VGKT+ I +F +D ++ + T+ +++ ++ + +W+ Sbjct: 2 RKFKLVFLGEQSVGKTSLITRFMYDTFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTA 60 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + L+ +R + +++ D++ F +R Sbjct: 61 GQERFRSLIPSYIRDSSV----AVVVYDITNRASFQNT-SKWVDDVRA------------ 103 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 +++VG K D+ R+ T A Sbjct: 104 ----------------------ERGNDVIIVLVGNKTDL-----SDKRQVTTEEAEKKAQ 136 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA 267 + S K KVL I G Sbjct: 137 EFNVMFIETSAKAGHNVKVLFKKIAQALPGMDK 169 >gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_029863 [Oryza sativa (indica cultivar-group)] gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_027753 [Oryza sativa (japonica cultivar-group)] Length = 216 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 26/235 (11%), Positives = 70/235 (29%), Gaps = 49/235 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ K +W+ Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKV-VKAQIWD 67 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +++ D+++ F ++E K LRD Sbjct: 68 TAGQERYRAITSAYYR----GAVGALVVYDVTRHVTF-ENVERWLKELRDHTDA------ 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + + Sbjct: 117 ----------------------------NIVIMLVGNKADLRH-----LRAVSVEDAKGF 143 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 A + S + + + + + + ++P G Sbjct: 144 AERESTFFMETSALESMNVESAFTEVLTQIYRVVS---KKALDIGDDPAAPPRGQ 195 >gi|157338312|emb|CAO39356.1| unnamed protein product [Vitis vinifera] Length = 217 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 26/235 (11%), Positives = 70/235 (29%), Gaps = 49/235 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ +W+ Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDD-KIVKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E K LRD Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTD------- 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R + ++ Sbjct: 117 ---------------------------SHIVIMLVGNKGDLRH-----LRAVSIDDAKAF 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 A + S + + + + + ++P + G Sbjct: 145 AERENTFFMETSALESMNVENAFTEVLTQIYQVVSRK---ALDIGDDPAALPKGQ 196 >gi|109940137|sp|P25766|RGP1_ORYSJ Ras-related protein RGP1 (GTP-binding regulatory protein RGP1) gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa (japonica cultivar-group)] Length = 226 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 23/221 (10%), Positives = 64/221 (28%), Gaps = 46/221 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ + +F + ++ T+ +E+ ++ Sbjct: 12 GQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDART-VKAQ 70 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ Q F + + LR A + Sbjct: 71 IWDTAGQERYRAVTSAYYR----GAVGAMLVYDITKRQSFDH-VARWLEELRGHADK--- 122 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 ++++G K D+ + +R Sbjct: 123 -------------------------------NIVIMLIGNKSDLGT-----LRVVPTEDA 146 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 + A + S + T+ + + Sbjct: 147 KEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKN 187 >gi|114576516|ref|XP_001149988.1| PREDICTED: similar to Rab10 isoform 3 [Pan troglodytes] Length = 231 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 71/228 (31%), Gaps = 16/228 (7%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFFDR-EEHATRPTLALEYSFGRRIGSGKSPQVMN 109 T +L++G VGKT + +F D T+ +++ G + Sbjct: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQG-KKIKLQ 61 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + ++L+ D++ + F E K LR+ ++ Sbjct: 62 IWDTAGQERFHTITTSYYR----GAMGIMLVYDITNGKSF----ENISKWLRNIDERWGL 113 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 V P L + + K + +++G K D R Sbjct: 114 AVLPRLVSNSRGQVILPSQPPKKLGLQHANEDVERMLLGNKCD-----MDDKRVVPKGKG 168 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG-SPAHPFRSHVVD 276 +A G S K + T+ +P S VD Sbjct: 169 EQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVD 216 >gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa (japonica cultivar-group)] gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa (japonica cultivar-group)] gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa (japonica cultivar-group)] gi|125527190|gb|EAY75304.1| hypothetical protein OsI_003151 [Oryza sativa (indica cultivar-group)] gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_002850 [Oryza sativa (japonica cultivar-group)] Length = 224 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 71/238 (29%), Gaps = 49/238 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F D TR T+ +E++ + Sbjct: 13 EEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDR-LVKAQ 71 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +++ D+++ F + E K LRD Sbjct: 72 IWDTAGQERYRAITSAYYR----GAVGALVVYDVTRRITF-ENAERWLKELRDHTDA--- 123 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 V++VG K D+ +R Sbjct: 124 -------------------------------NIVVMLVGNKADLRH-----LRAVPAEDA 147 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 R+ A G + S + + + + R+ + ++P G Sbjct: 148 RAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVS---RNALDIGDDPAAPPRGR 202 >gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis thaliana] Length = 220 Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 71/250 (28%), Gaps = 57/250 (22%) Query: 58 RTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSL 116 ++++G VGKT + +F + ++ T+ +E+ +W+ Sbjct: 16 FKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTL-VIDNKTVKAQIWDTAGQ 74 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + R + +L+ D+++ Q F + + LR A + Sbjct: 75 ER--AVTSAYYR----GAVGAMLVYDMTKRQSFDH-MAKWLEELRGHADK---------- 117 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 ++++G K D+ S +R + A Sbjct: 118 ------------------------NIVIMLIGNKCDLGS-----LRAVPTEDAQEFAQRE 148 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK---I 293 + S + TI + + + D + G S K I Sbjct: 149 NLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDDAD------GNSSLLKGTRI 202 Query: 294 GDTGAQSVER 303 Q + Sbjct: 203 IIPSEQESGK 212 >gi|116501548|gb|EAU84443.1| hypothetical protein CC1G_01439 [Coprinopsis cinerea okayama7#130] Length = 513 Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 111/334 (33%), Gaps = 59/334 (17%) Query: 17 MFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINK 76 M R E+ ++ D L + + + + I++LG GK+T + Sbjct: 1 MDNSRPSSPEAPPENLWD---------SILNSVSTSRSIPAKQIILLGQPSTGKSTIASA 51 Query: 77 FFDR---EEHATRPTL--ALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHG 131 + +E+ + A+ Y F S + LL + Sbjct: 52 LLQKNVSDENKDDGRIDFAVGYEFADVKDEEGR--SSRYLMPSSSHSYTNLLPHFVPPRT 109 Query: 132 -LQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ 190 L V+++LD ++P F +L+ + + D A+ + +RE +R Sbjct: 110 ALPHTCVVIVLDWTRPWTFIEELQSWLQWVEDWAKGDGSREVEIVREENRERR------- 162 Query: 191 NKDSEKLDPLPFPVIIVGGKYDVFSG--------------FDPIIR-KHTCRCLRSMAHL 235 + + P+I+V K D+ + R + LR++ Sbjct: 163 -PGTLTHNASGVPIIVVCSKADLIDDGPEIAAGAMVKGKGGEWEERTDGIMQVLRTICLK 221 Query: 236 IGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF----------------RSHVVDFNE 279 G LL+ + L ++LR HL F PA + + +D + Sbjct: 222 YGAGLLYTTPLPETL-QILRQYALHLLFMPPAPSPGMEAQVPMKNIFPFQHKPNTLD-RD 279 Query: 280 PLCIWFGTDSWSKIGDTGAQSVER-IGATFGMEV 312 + + G DSW KIG + + ++ Sbjct: 280 HILVPAGWDSWGKIGVLREGFDAKLWNEAWERDL 313 >gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1] gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1] Length = 210 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 73/246 (29%), Gaps = 52/246 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK+ +W+ Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKT-IKAQIWD 64 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D ++ Q F E K LR+ A + Sbjct: 65 TAGQERYRAITSAYYR----GAVGALLVYDTTKEQTFAN-CERWLKELREHADK------ 113 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D +R Sbjct: 114 ----------------------------NIVIMLVGNKID-----QKHVRAIKTDQGAEF 140 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD------FNEPLCIWFG 286 A + + S ++ I + + + + + I Sbjct: 141 AEARKLSFIETSALDATNVELAFQNILTEIYRIVSSKALENGNSGQNPLGDRKVVEITKS 200 Query: 287 TDSWSK 292 D+ +K Sbjct: 201 QDADAK 206 >gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba] gi|1098294|prf||2115367B small GTP-binding protein Length = 207 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 29/234 (12%), Positives = 68/234 (29%), Gaps = 49/234 (20%) Query: 55 PKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWEL 113 ++++G VGK+ +++F + ++ T+ +E++ K +W+ Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKV-VKAQIWDT 59 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 + + R + +L+ D+++ F ++E K LRD Sbjct: 60 AGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTDA------- 107 Query: 174 ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA 233 V++VG K D+ +R + + A Sbjct: 108 ---------------------------NIVVMLVGNKADLRH-----LRAVSTEDSTAFA 135 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 + S + + + + D P + G Sbjct: 136 ERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDD---PAALPKGQ 186 >gi|267527|sp|Q01111|YPT3_NICPL Ras-related protein YPT3 gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia] Length = 218 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 28/250 (11%), Positives = 69/250 (27%), Gaps = 54/250 (21%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ +W+ Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSL-NIDNKVIKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ + ++ K LRD Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHVT-YENVTRWLKELRDHTD------- 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 V+++G K D+ + + + + Sbjct: 117 ---------------------------PNIVVMLIGNKSDLRH-----LVAVSTDEAKGL 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVV--------DFNEPLCIW 284 A G + S + + + E + I Sbjct: 145 AEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETINIK 204 Query: 285 FGTDSWSKIG 294 SW K G Sbjct: 205 DEGSSWKKFG 214 >gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum] Length = 218 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 27/224 (12%), Positives = 67/224 (29%), Gaps = 46/224 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ GK +W+ Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKV-IKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E + LRD Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHSTF-ENVERWLRELRDHTD------- 116 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 V++VG K D+ + + +S Sbjct: 117 ---------------------------PNIVVMLVGNKSDLRH-----LVAVSTEDGKSF 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 A + S ++ + + + D Sbjct: 145 AEKESLYFMETSALEATNVEISFAEVLTQIYNVISKKAMETSDD 188 >gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis] Length = 223 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 31/242 (12%), Positives = 70/242 (28%), Gaps = 51/242 (21%) Query: 58 RTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSL 116 ++++G VGK+ ++++ + ++ T+ +E+ + +W+ Sbjct: 17 FKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDH-KSVKAQIWDTAGQ 75 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELR 176 + + R + +L+ D+++ Q F + + LR A + Sbjct: 76 ERYRAVTSAYYR----GAVGAMLVYDVTRRQTFDH-IPRWLEELRGHADK---------- 120 Query: 177 EILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLI 236 +I+VG K D+ R + + A Sbjct: 121 ------------------------NIVIILVGNKSDL-----EDQRAISTEDAKEFAETE 151 Query: 237 GGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT 296 G L S + T+ F +P G+ + KI Sbjct: 152 GLFFLETSALNAVNVETAFSTVLTEIFNIVNKKNLVAGEGNGDP-----GSLAGKKIDIV 206 Query: 297 GA 298 Sbjct: 207 PG 208 >gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum] gi|738936|prf||2001457D GTP-binding protein Length = 217 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 30/235 (12%), Positives = 68/235 (28%), Gaps = 49/235 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ K +W+ Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKV-VKAQIWD 68 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + + R + +L+ D+++ F ++E K LRD Sbjct: 69 TAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTDA------ 117 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 V++VG K D+ +R + S Sbjct: 118 ----------------------------NIVVMLVGNKADLRH-----LRAVSTEDSTSF 144 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 A + S + + + + D P + G Sbjct: 145 AEREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDD---PAALPKGQ 196 >gi|154147600|ref|NP_001093711.1| RAB31, member RAS oncogene family [Xenopus tropicalis] gi|134023906|gb|AAI35942.1| Rab31 protein [Xenopus tropicalis] Length = 194 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 68/210 (32%), Gaps = 46/210 (21%) Query: 55 PKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWEL 113 +E + +LG VGK++ +++F D +H PT+ + SG +W+ Sbjct: 3 IRELKVCLLGDTGVGKSSIVSRFVQDHFDHNISPTIGASFMTKTVP-SGNELHKFLIWDT 61 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 + L + R A +++ D+++ F L+ K L++ Sbjct: 62 AGQERFHSLAPMYYR----GSAAAVIVYDITKQDTF-HTLKKWVKELKEH---------- 106 Query: 174 ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA 233 P + I G K D+ R+ T + R A Sbjct: 107 ------------------------GPENIVMAIAGNKCDL-----SDTREVTMKDAREYA 137 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 IG ++ S K + L I Sbjct: 138 ESIGAIVVETSAKNAINVEELFQGISRRIP 167 Searching..................................................done Results from round 5 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melano... 376 e-102 gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light inter... 370 e-101 gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain is... 366 1e-99 gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain i... 364 5e-99 gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein... 362 2e-98 gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermed... 361 3e-98 gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein... 361 3e-98 gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermedi... 361 4e-98 gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light int... 361 4e-98 gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermed... 361 5e-98 gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermed... 360 7e-98 gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] 360 8e-98 gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermed... 359 2e-97 gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 lig... 357 5e-97 gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermed... 357 6e-97 gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 ligh... 357 9e-97 gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin li... 356 1e-96 gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light ... 355 3e-96 gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light ... 354 6e-96 gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 ... 354 7e-96 gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light interme... 354 7e-96 gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A is... 354 8e-96 gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein li... 353 1e-95 gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light int... 353 1e-95 gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo s... 353 1e-95 gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light ... 353 1e-95 gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light int... 352 2e-95 gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermed... 352 2e-95 gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculu... 352 2e-95 gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermedi... 352 3e-95 gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light inte... 352 3e-95 gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] 351 5e-95 gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light int... 351 5e-95 gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [D... 350 7e-95 gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light interme... 350 8e-95 gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 ... 349 2e-94 gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo s... 349 2e-94 gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermed... 348 3e-94 gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermed... 347 5e-94 gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chai... 342 2e-92 gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light inter... 341 4e-92 gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light inte... 340 6e-92 gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-interm... 339 2e-91 gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoob... 339 2e-91 gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light... 337 5e-91 gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 ... 337 6e-91 gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon n... 335 3e-90 gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] 334 9e-90 gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A... 332 2e-89 gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-interm... 332 2e-89 gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] 330 1e-88 gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic,... 329 2e-88 gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] 329 2e-88 gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] 328 4e-88 gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] 328 4e-88 gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate ... 323 1e-86 gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] 322 2e-86 gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light inte... 322 2e-86 gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin li... 322 3e-86 gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein... 318 4e-85 gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] 317 6e-85 gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein li... 315 3e-84 gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Dan... 315 4e-84 gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon n... 311 5e-83 gi|157119433|ref|XP_001653379.1| conserved hypothetical protein ... 311 5e-83 gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae s... 307 5e-82 gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [G... 307 1e-81 gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [S... 306 1e-81 gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibencla... 303 9e-81 gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosoph... 302 3e-80 gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella... 301 6e-80 gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoob... 298 5e-79 gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] 295 4e-78 gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, is... 293 1e-77 gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon n... 290 1e-76 gi|157128066|ref|XP_001661298.1| dynein light intermediate chain... 288 3e-76 gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermed... 284 6e-75 gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermedi... 283 1e-74 gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00... 283 1e-74 gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [S... 282 2e-74 gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella... 280 9e-74 gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae s... 277 7e-73 gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938... 275 2e-72 gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150... 268 5e-70 gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chai... 263 2e-68 gi|115398722|ref|XP_001214950.1| conserved hypothetical protein ... 262 2e-68 gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Tr... 261 6e-68 gi|121713178|ref|XP_001274200.1| dynein light intermediate chain... 259 2e-67 gi|119479611|ref|XP_001259834.1| conserved hypothetical protein ... 252 2e-65 gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosoph... 251 6e-65 gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light interme... 250 1e-64 gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus... 250 2e-64 gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, m... 243 1e-62 gi|109105440|ref|XP_001118047.1| PREDICTED: similar to RAB1B, me... 243 1e-62 gi|114675154|ref|XP_001147785.1| PREDICTED: similar to GTP-bindi... 238 6e-61 gi|91076508|ref|XP_973251.1| PREDICTED: similar to CG5771-PB, is... 235 3e-60 gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 ligh... 235 3e-60 gi|5902803|sp|P28188|ARA5_ARATH Ras-related protein ARA-5 >gnl|B... 235 3e-60 gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Tr... 235 4e-60 gi|66513627|ref|XP_623997.1| PREDICTED: similar to Rab-protein 1... 235 4e-60 gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated fa... 235 5e-60 gi|156551916|ref|XP_001607057.1| PREDICTED: similar to putative ... 234 9e-60 gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella... 233 1e-59 gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens] 233 1e-59 gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [sy... 233 2e-59 gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca coagulata] 232 2e-59 gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus] 231 5e-59 gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncog... 231 5e-59 gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] 231 5e-59 gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos] 231 5e-59 gi|57524801|ref|NP_001005827.1| Ras-related protein Rab-11A [Gal... 231 5e-59 gi|4758984|ref|NP_004654.1| Ras-related protein Rab-11A [Homo sa... 231 6e-59 gi|6679583|ref|NP_033023.1| RAB11B, member RAS oncogene family [... 231 7e-59 gi|114638536|ref|XP_001150399.1| PREDICTED: similar to RAB1B, me... 231 8e-59 gi|85109909|ref|XP_963146.1| GTP-BINDING PROTEIN YPT1 [Neurospor... 230 1e-58 gi|84000297|ref|NP_001033251.1| hypothetical protein LOC534708 [... 230 1e-58 gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens] 230 1e-58 gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon n... 230 1e-58 gi|14249144|ref|NP_116006.1| RAB11B, member RAS oncogene family ... 230 1e-58 gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus] 230 1e-58 gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 ... 230 1e-58 gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus] 230 1e-58 gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Dan... 229 2e-58 gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene fami... 229 2e-58 gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene fami... 229 2e-58 gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [H... 229 2e-58 gi|60302752|ref|NP_001012569.1| RAB11B, member RAS oncogene fami... 229 2e-58 gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cry... 229 3e-58 gi|131849|sp|P22129|RB11B_DISOM Ras-related protein Rab-11B (ORA... 228 3e-58 gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malas... 228 4e-58 gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus] 228 4e-58 gi|4758986|ref|NP_004209.1| RAB11B, member RAS oncogene family [... 228 5e-58 gi|50540176|ref|NP_001002555.1| hypothetical protein LOC436828 [... 227 8e-58 gi|17137216|ref|NP_477170.1| Rab-protein 11 CG5771-PB, isoform B... 227 8e-58 gi|73987203|ref|XP_854399.1| PREDICTED: similar to RAB11B, membe... 227 8e-58 gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens] 227 9e-58 gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene fam... 227 1e-57 gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] 227 1e-57 gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlam... 226 1e-57 gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase 226 1e-57 gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human R... 226 1e-57 gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae s... 226 1e-57 gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00... 226 2e-57 gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G P... 226 2e-57 gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon n... 226 2e-57 gi|55925277|ref|NP_001007360.1| RAB11a, member RAS oncogene fami... 226 2e-57 gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster] 226 2e-57 gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries] 225 3e-57 gi|119183788|ref|XP_001242885.1| hypothetical protein CIMG_06781... 225 3e-57 gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti] >gnl|BL_O... 225 3e-57 gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] 225 3e-57 gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans] 225 3e-57 gi|3024528|sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV >gnl... 225 4e-57 gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interact... 225 4e-57 gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella] 225 4e-57 gi|66556180|ref|XP_392967.2| PREDICTED: similar to Rab-protein 1... 225 4e-57 gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula] 225 4e-57 gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus] 225 4e-57 gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [... 225 4e-57 gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella... 225 4e-57 gi|149426497|ref|XP_001518037.1| PREDICTED: similar to rab11, pa... 225 5e-57 gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus] >gnl|BL... 225 5e-57 gi|131785|sp|P22125|RAB1_DISOM Ras-related protein ORAB-1 >gnl|B... 225 6e-57 gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vini... 225 6e-57 gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus] 224 7e-57 gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene famil... 224 7e-57 gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum] >g... 224 8e-57 gi|149692307|ref|XP_001496560.1| PREDICTED: similar to rab11 [Eq... 224 8e-57 gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa] 224 8e-57 gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa (jap... 224 9e-57 gi|148236881|ref|NP_001088852.1| hypothetical protein LOC496163 ... 224 9e-57 gi|157328625|emb|CAO22323.1| unnamed protein product [Vitis vini... 224 9e-57 gi|55742328|ref|NP_001007162.1| RAB1A, member RAS oncogene famil... 224 9e-57 gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, put... 224 1e-56 gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon n... 223 1e-56 gi|42543204|pdb|1OIW|A Chain A, X-Ray Structure Of The Small G P... 223 1e-56 gi|52345666|ref|NP_001004880.1| MGC88884 protein [Xenopus tropic... 223 1e-56 gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana ... 223 1e-56 gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis] >gnl|BL_O... 223 2e-56 gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [sy... 223 2e-56 gi|4758988|ref|NP_004152.1| RAB1A, member RAS oncogene family [H... 223 2e-56 gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [C... 223 2e-56 gi|432607|gb|AAB28535.1| ras-related GTP binding protein possess... 223 2e-56 gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound ... 223 2e-56 gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis] 223 2e-56 gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putativ... 223 2e-56 gi|72535190|ref|NP_001026957.1| RAB1B, member RAS oncogene famil... 223 2e-56 gi|149725600|ref|XP_001491236.1| PREDICTED: hypothetical protein... 222 2e-56 gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase ho... 222 2e-56 gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Crypto... 222 2e-56 gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces po... 222 2e-56 gi|157761211|ref|XP_001672948.1| Hypothetical protein CBG01077 [... 222 3e-56 gi|17558550|ref|NP_503397.1| RAB family member (rab-1) [Caenorha... 222 3e-56 gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, i... 222 3e-56 gi|3024501|sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C >gnl... 222 3e-56 gi|118087671|ref|XP_419342.2| PREDICTED: hypothetical protein [G... 222 3e-56 gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa (jap... 222 4e-56 gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicot... 221 4e-56 gi|466171|sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 >gnl|BL_... 221 4e-56 gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus] 221 4e-56 gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max] 221 4e-56 gi|56205120|emb|CAI24449.1| RAB1, member RAS oncogene family [Mu... 221 5e-56 gi|119584836|gb|EAW64432.1| dynein, cytoplasmic 1, light interme... 221 5e-56 gi|156545982|ref|XP_001607208.1| PREDICTED: similar to rab1 [Nas... 221 5e-56 gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa] 221 5e-56 gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bomb... 221 5e-56 gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa (jap... 221 5e-56 gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (jap... 221 5e-56 gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermedia... 221 6e-56 gi|157344192|emb|CAO69125.1| unnamed protein product [Vitis vini... 221 6e-56 gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HO... 221 6e-56 gi|147844837|emb|CAN83336.1| hypothetical protein [Vitis vinifer... 221 6e-56 gi|157341762|emb|CAO62317.1| unnamed protein product [Vitis vini... 221 7e-56 gi|67536988|ref|XP_662268.1| hypothetical protein AN4664.2 [Aspe... 221 7e-56 gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus] 221 7e-56 gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus] 221 7e-56 gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsu... 221 8e-56 gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa] 221 8e-56 gi|15222396|ref|NP_172221.1| AtRABA2b (Arabidopsis Rab GTPase ho... 221 8e-56 gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis] 221 8e-56 gi|15217622|ref|NP_171715.1| ATRAB1B (Arabidopsis thaliana respo... 221 8e-56 gi|206553|gb|AAA42006.1| ras protein 220 9e-56 gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum] >g... 220 1e-55 gi|39971217|ref|XP_366999.1| hypothetical protein MGG_03075 [Mag... 220 1e-55 gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus] 220 1e-55 gi|15230422|ref|NP_187823.1| AtRABA4d (Arabidopsis Rab GTPase ho... 220 1e-55 gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus] 220 1e-55 gi|154318598|ref|XP_001558617.1| GTP-binding protein ypt1 [Botry... 220 1e-55 gi|147777473|emb|CAN62732.1| hypothetical protein [Vitis vinifer... 220 2e-55 gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaet... 220 2e-55 gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Sol... 219 2e-55 gi|146097038|ref|XP_001468017.1| dynein light intermediate chain... 219 2e-55 gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein... 219 2e-55 gi|68402952|ref|XP_695291.1| PREDICTED: similar to Rab1-prov pro... 219 2e-55 gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum] >g... 219 2e-55 gi|91087113|ref|XP_975150.1| PREDICTED: similar to CG3320-PA, is... 219 3e-55 gi|15233873|ref|NP_193578.1| AtRABA1e (Arabidopsis Rab GTPase ho... 219 3e-55 gi|464524|sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A >gnl|... 219 3e-55 gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon n... 219 3e-55 gi|41055496|ref|NP_957436.1| hypothetical protein LOC394117 [Dan... 218 4e-55 gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptospor... 218 4e-55 gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a... 218 4e-55 gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio] 218 4e-55 gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab1... 218 4e-55 gi|15218719|ref|NP_174177.1| AtRABA1i (Arabidopsis Rab GTPase ho... 218 4e-55 gi|94733945|emb|CAK04342.1| novel protein (zgc:55760) [Danio rerio] 218 4e-55 gi|114577812|ref|XP_530454.2| PREDICTED: hypothetical protein [P... 218 4e-55 gi|3024500|sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A >gnl... 218 5e-55 gi|39978155|ref|XP_370465.1| secretion related GTPase [Magnaport... 218 5e-55 gi|17507543|ref|NP_490675.1| RAB family member (rab-11.1) [Caeno... 218 5e-55 gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Hypo... 218 5e-55 gi|115478587|ref|NP_001062887.1| Os09g0327100 [Oryza sativa (jap... 218 5e-55 gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlam... 218 5e-55 gi|156063734|ref|XP_001597789.1| GTP-binding protein ypt1 [Scler... 218 5e-55 gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In C... 218 5e-55 gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa (jap... 218 6e-55 gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Cocci... 218 6e-55 gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassi... 218 6e-55 gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa (jap... 218 6e-55 gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza... 218 7e-55 gi|145242842|ref|XP_001393994.1| secretion related GTPase srgB-A... 218 7e-55 gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis] 217 7e-55 gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta v... 217 8e-55 gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1... 217 8e-55 gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa] 217 9e-55 gi|7533034|gb|AAF63333.1|AF244545_1 YptA [Aspergillus awamori] 217 9e-55 gi|109511883|ref|XP_001061706.1| PREDICTED: similar to Ras-relat... 217 9e-55 gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum an... 217 1e-54 gi|226486|prf||1515250A rab1B protein 217 1e-54 gi|1053067|gb|AAA80680.1| small GTP-binding protein 217 1e-54 gi|401686|sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 >gnl|B... 217 1e-54 gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza ... 217 1e-54 gi|75077202|sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B >gn... 217 1e-54 gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens] 216 1e-54 gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative... 216 1e-54 gi|147834751|emb|CAN75016.1| hypothetical protein [Vitis vinifer... 216 1e-54 gi|15237828|ref|NP_200723.1| AtRABA2d (Arabidopsis Rab GTPase ho... 216 1e-54 gi|2500076|sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT... 216 1e-54 gi|109103158|ref|XP_001089840.1| PREDICTED: similar to RAB1, mem... 216 1e-54 gi|114576516|ref|XP_001149988.1| PREDICTED: similar to Rab10 iso... 216 1e-54 gi|15238392|ref|NP_201330.1| AtRABA4a (Arabidopsis Rab GTPase ho... 216 2e-54 gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum] >g... 216 2e-54 gi|149640905|ref|XP_001513393.1| PREDICTED: similar to RAB1A, me... 216 2e-54 gi|13569962|ref|NP_112243.1| RAB1B, member RAS oncogene family [... 216 2e-54 gi|15232652|ref|NP_190267.1| AtRABA2c/AtRab11A (Arabidopsis Rab ... 216 2e-54 gi|158292354|ref|XP_313857.2| AGAP004559-PD [Anopheles gambiae s... 216 2e-54 gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [P... 216 2e-54 gi|157874331|ref|XP_001685649.1| dynein light intermediate chain... 216 2e-54 gi|466172|sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 >gnl|B... 216 2e-54 gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza ... 216 2e-54 gi|115495993|ref|NP_001069701.1| RAB1B, member RAS oncogene fami... 216 2e-54 gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa (jap... 216 2e-54 gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis] 216 2e-54 gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis] 216 2e-54 gi|67528150|ref|XP_661885.1| GTP-binding protein Ypt1 [Aspergill... 216 2e-54 gi|1053065|gb|AAA80679.1| small GTP-binding protein 216 3e-54 gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis] 216 3e-54 gi|66816599|ref|XP_642309.1| Rab GTPase [Dictyostelium discoideu... 215 3e-54 gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum] >g... 215 3e-54 gi|154343515|ref|XP_001567703.1| dynein light intermediate chain... 215 3e-54 gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Pha... 215 3e-54 gi|145610591|ref|XP_368165.2| hypothetical protein MGG_01079 [Ma... 215 3e-54 gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1, put... 215 4e-54 gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana] 215 4e-54 gi|72180728|ref|XP_798729.1| PREDICTED: similar to Rab11b [Stron... 215 4e-54 gi|147789804|emb|CAN62934.1| hypothetical protein [Vitis vinifer... 215 5e-54 gi|149734235|ref|XP_001490105.1| PREDICTED: similar to Rab22a pr... 215 5e-54 gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [A... 214 5e-54 gi|56605816|ref|NP_001008371.1| similar to Ras-related protein R... 214 6e-54 gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein ... 214 8e-54 gi|1381676|gb|AAB97114.1| small GTP-binding protein [Glycine max] 214 8e-54 gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii] 214 9e-54 gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster] 214 9e-54 gi|148706632|gb|EDL38579.1| dynein cytoplasmic 2 light intermedi... 213 1e-53 gi|154276982|ref|XP_001539336.1| GTP-binding protein ypt1 [Ajell... 213 1e-53 gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana] 213 1e-53 gi|157745909|ref|XP_001668051.1| Hypothetical protein CBG03904 [... 213 1e-53 gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus] 213 1e-53 gi|50550177|ref|XP_502561.1| hypothetical protein [Yarrowia lipo... 213 2e-53 gi|147811153|emb|CAN70163.1| hypothetical protein [Vitis vinifer... 213 2e-53 gi|125951003|ref|XP_001345672.1| PREDICTED: hypothetical protein... 213 2e-53 gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassi... 213 2e-53 gi|83771518|dbj|BAE61650.1| unnamed protein product [Aspergillus... 213 2e-53 gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thali... 213 2e-53 gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyce... 213 2e-53 gi|15236099|ref|NP_195709.1| ATGB3 (GTP-BINDING PROTEIN 3); GTP ... 213 2e-53 gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Pichia... 212 3e-53 gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aes... 212 3e-53 gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekine... 212 3e-53 gi|116793841|gb|ABK26899.1| unknown [Picea sitchensis] 212 3e-53 gi|18422766|ref|NP_568678.1| AtRABD2b/AtRab1A (Arabidopsis Rab G... 212 3e-53 gi|109940137|sp|P25766|RGP1_ORYSJ Ras-related protein RGP1 (GTP-... 212 3e-53 gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norv... 211 5e-53 gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa] 211 5e-53 gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces po... 211 5e-53 gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabido... 211 5e-53 gi|116194005|ref|XP_001222815.1| hypothetical protein CHGG_06720... 211 6e-53 gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon n... 211 6e-53 gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding pr... 211 6e-53 gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago ... 211 7e-53 gi|118370073|ref|XP_001018239.1| hypothetical protein TTHERM_002... 211 7e-53 gi|66810383|ref|XP_638915.1| Rab GTPase [Dictyostelium discoideu... 211 7e-53 gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lema... 211 7e-53 gi|450635|gb|AAA50159.1| GTP binding protein 211 8e-53 gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis ... 211 8e-53 gi|227603|prf||1707300A guanine nucleotide binding protein 210 9e-53 gi|466170|sp|P16976|YPTM1_MAIZE GTP-binding protein YPTM1 >gnl|B... 210 9e-53 gi|3024505|sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D >gnl... 210 1e-52 gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus N... 210 1e-52 gi|50306647|ref|XP_453297.1| unnamed protein product [Kluyveromy... 209 2e-52 gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis] 209 2e-52 gi|125562255|gb|EAZ07703.1| hypothetical protein OsI_028935 [Ory... 209 2e-52 gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon n... 209 2e-52 gi|25151905|ref|NP_502519.2| Dynein Light Intermediate chain fam... 209 3e-52 gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneif... 209 3e-52 gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum] >g... 209 3e-52 gi|125605011|gb|EAZ44047.1| hypothetical protein OsJ_027530 [Ory... 208 4e-52 gi|154285758|ref|XP_001543674.1| conserved hypothetical protein ... 208 4e-52 gi|75070935|sp|Q5REC9|RAB8B_PONPY Ras-related protein Rab-8B >gn... 208 4e-52 gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norv... 208 4e-52 gi|158602493|gb|EDP38908.1| dynein light intermediate chain, put... 208 5e-52 gi|15226182|ref|NP_180943.1| ArRABA1h (Arabidopsis Rab GTPase ho... 208 5e-52 gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum] 208 5e-52 gi|156102877|ref|XP_001617131.1| small GTPase rab11, putative [P... 208 5e-52 gi|74152890|dbj|BAE27741.1| unnamed protein product [Mus musculus] 208 5e-52 gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa (jap... 208 6e-52 gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene fami... 208 7e-52 gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japo... 208 7e-52 gi|125604071|gb|EAZ43396.1| hypothetical protein OsJ_026879 [Ory... 207 8e-52 gi|149036685|gb|EDL91303.1| RAB7, member RAS oncogene family, is... 207 8e-52 gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabd... 207 9e-52 gi|23463313|ref|NP_695229.1| RAB8B, member RAS oncogene family [... 207 9e-52 gi|45185690|ref|NP_983406.1| ACR003Cp [Ashbya gossypii ATCC 1089... 207 9e-52 gi|234746|gb|AAB19681.1| RAS-related protein MEL [Homo sapiens] 207 1e-51 gi|157428086|ref|NP_001098951.1| RAB8A, member RAS oncogene fami... 207 1e-51 gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotian... 207 1e-51 gi|157766202|ref|XP_001675444.1| Hypothetical protein CBG18559 [... 207 1e-51 gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum] 207 1e-51 gi|30585389|gb|AAP36967.1| Homo sapiens mel transforming oncogen... 207 1e-51 gi|2118463|pir||I78851 GTP-binding protein MEL - mouse >gnl|BL_O... 207 1e-51 gi|119179533|ref|XP_001241343.1| conserved hypothetical protein ... 206 1e-51 gi|16933567|ref|NP_005361.2| mel transforming oncogene [Homo sap... 206 1e-51 gi|60729663|pir||JC8006 Rab7 protein - sea anemone (Aiptasia pul... 206 1e-51 gi|7706563|ref|NP_057614.1| RAB8B, member RAS oncogene family [H... 206 1e-51 gi|124513178|ref|XP_001349945.1| small GTPase Rab11 [Plasmodium ... 206 1e-51 gi|1370196|emb|CAA98175.1| RAB8D [Lotus japonicus] 206 1e-51 gi|50345016|ref|NP_001002178.1| hypothetical protein LOC431725 [... 206 1e-51 gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lema... 206 2e-51 gi|50752811|ref|XP_413757.1| PREDICTED: similar to GTPase Rab8b ... 206 2e-51 gi|147783308|emb|CAN64127.1| hypothetical protein [Vitis vinifera] 206 2e-51 gi|93279750|pdb|2FU5|C Chain C, Structure Of Rab8 In Complex Wit... 206 2e-51 gi|121713784|ref|XP_001274503.1| Rab small monomeric GTPase Rab7... 206 2e-51 gi|38372905|ref|NP_075615.2| cell line NK14 derived transforming... 206 2e-51 gi|125821495|ref|XP_001334371.1| PREDICTED: similar to GTPase Ra... 206 2e-51 gi|157337366|emb|CAO21712.1| unnamed protein product [Vitis vini... 206 2e-51 gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa (jap... 206 2e-51 gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa] 206 2e-51 gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene fami... 206 2e-51 gi|149773480|ref|NP_001092729.1| hypothetical protein LOC1000937... 206 3e-51 gi|123708078|ref|NP_001074105.1| hypothetical protein LOC791154 ... 206 3e-51 gi|85103291|ref|XP_961487.1| hypothetical protein [Neurospora cr... 206 3e-51 gi|115456231|ref|NP_001051716.1| Os03g0819900 [Oryza sativa (jap... 206 3e-51 gi|81251485|gb|ABB70064.1| WSSV receptor Rab7 [Penaeus monodon] 206 3e-51 gi|57524756|ref|NP_001005591.1| hypothetical protein LOC449549 [... 206 3e-51 gi|126645710|ref|XP_001388049.1| Rab11, putative [Cryptosporidiu... 205 3e-51 gi|157344312|emb|CAO69245.1| unnamed protein product [Vitis vini... 205 3e-51 gi|3024503|sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C >gnl... 205 3e-51 gi|157347471|emb|CAO18108.1| unnamed protein product [Vitis vini... 205 3e-51 gi|148236958|ref|NP_001087273.1| MGC85265 protein [Xenopus laevi... 205 3e-51 gi|46121525|ref|XP_385317.1| RAB7_NEUCR Probable Ras-related pro... 205 3e-51 gi|46326983|gb|AAS88430.1| ethylene-responsive small GTP-binding... 205 3e-51 gi|25150215|ref|NP_491199.2| RAB family member (rab-8) [Caenorha... 205 4e-51 gi|25151901|ref|NP_502518.2| Dynein Light Intermediate chain fam... 205 4e-51 gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideu... 205 4e-51 gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brug... 205 4e-51 gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa] 205 4e-51 gi|119478910|ref|XP_001259484.1| Rab small monomeric GTPase Rab7... 205 5e-51 gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gib... 205 5e-51 gi|140832723|gb|AAI35799.1| Rab8b protein [Xenopus tropicalis] 204 5e-51 gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotian... 204 5e-51 gi|154309394|ref|XP_001554031.1| GTPase Rab7 [Botryotinia fuckel... 204 5e-51 gi|126277017|ref|XP_001366139.1| PREDICTED: similar to RAB-8b pr... 204 5e-51 gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotian... 204 5e-51 gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus] 204 6e-51 gi|58260438|ref|XP_567629.1| RAB small monomeric GTPase [Cryptoc... 204 6e-51 gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus] 204 6e-51 gi|115496115|ref|NP_001069785.1| RAB8B, member RAS oncogene fami... 204 7e-51 gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis] 204 7e-51 gi|12832758|dbj|BAB22245.1| unnamed protein product [Mus musculus] 204 7e-51 gi|116206514|ref|XP_001229066.1| hypothetical protein CHGG_02550... 204 7e-51 gi|19918938|dbj|BAB88682.1| small GTPase AvaA [Emericella nidulans] 204 7e-51 gi|3024527|sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV >gnl... 204 8e-51 gi|71022857|ref|XP_761658.1| hypothetical protein UM05511.1 [Ust... 204 8e-51 gi|49522647|gb|AAH71176.1| Rab8a protein [Rattus norvegicus] 204 9e-51 gi|56118925|ref|NP_001008026.1| RAB7A, member RAS oncogene famil... 204 9e-51 gi|126341423|ref|XP_001369723.1| PREDICTED: similar to Ras-relat... 204 9e-51 gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa (jap... 204 9e-51 gi|57530730|ref|NP_001006363.1| RAB5A, member RAS oncogene famil... 204 1e-50 gi|18447921|dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotian... 204 1e-50 gi|156396428|ref|XP_001637395.1| predicted protein [Nematostella... 204 1e-50 gi|15238542|ref|NP_200792.1| Ras-related GTP-binding family prot... 203 1e-50 gi|871506|emb|CAA90081.1| small GTP-binding protein [Pisum sativum] 203 1e-50 gi|157327287|emb|CAO15080.1| unnamed protein product [Vitis vini... 203 1e-50 gi|154272996|ref|XP_001537350.1| GTP-binding protein SAS1 [Ajell... 203 1e-50 gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis] 203 1e-50 gi|41055538|ref|NP_957222.1| RAB family member rab-7 [Danio reri... 203 1e-50 gi|47229587|emb|CAG06783.1| unnamed protein product [Tetraodon n... 203 1e-50 gi|126303044|ref|XP_001370866.1| PREDICTED: similar to Rab10 [Mo... 203 1e-50 gi|46403855|gb|AAS92973.1| vacuolar biogenesis protein [Aspergil... 203 1e-50 gi|15231847|ref|NP_190929.1| ATRAB8; GTP binding [Arabidopsis th... 203 1e-50 gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculu... 203 1e-50 gi|15231322|ref|NP_190192.1| ARA3; GTP binding [Arabidopsis thal... 203 1e-50 gi|19923262|ref|NP_004153.2| RAB5A, member RAS oncogene family [... 203 2e-50 gi|7710086|ref|NP_057885.1| RAB10, member RAS oncogene family [M... 203 2e-50 gi|871514|emb|CAA90079.1| small G protein [Pisum sativum] 203 2e-50 gi|149634147|ref|XP_001508982.1| PREDICTED: similar to Ras-relat... 203 2e-50 gi|50540198|ref|NP_001002566.1| hypothetical protein LOC436839 [... 203 2e-50 gi|116057790|emb|CAL53993.1| Rab-type small GTP-binding protein-... 203 2e-50 gi|148229101|ref|NP_001083268.1| hypothetical protein LOC398835 ... 203 2e-50 gi|1370198|emb|CAA98176.1| RAB8E [Lotus japonicus] 203 2e-50 gi|50754381|ref|XP_414359.1| PREDICTED: similar to RAB7 protein ... 203 2e-50 gi|149728225|ref|XP_001488351.1| PREDICTED: similar to RAB7 prot... 203 2e-50 gi|114585675|ref|XP_516319.2| PREDICTED: RAB5A, member RAS oncog... 203 2e-50 gi|148223285|ref|NP_001087006.1| RAB7, member RAS oncogene famil... 203 2e-50 gi|56118881|ref|NP_001008068.1| RAB5A, member RAS oncogene famil... 203 2e-50 gi|145347064|ref|XP_001417998.1| predicted protein [Ostreococcus... 203 2e-50 gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thal... 203 2e-50 gi|157757535|ref|XP_001671111.1| Hypothetical protein CBG01826 [... 203 2e-50 gi|13385374|ref|NP_080163.1| RAB5A, member RAS oncogene family [... 203 2e-50 gi|50979150|ref|NP_001003317.1| GTP-binding protein (rab5) [Cani... 203 2e-50 gi|115495947|ref|NP_001069654.1| hypothetical protein LOC539764 ... 203 2e-50 gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo pygmaeus] 202 2e-50 gi|78045539|ref|NP_001030253.1| hypothetical protein LOC509970 [... 202 3e-50 Sequences not found previously or not previously below threshold: gi|116498990|gb|EAU81885.1| hypothetical protein CC1G_06096 [Cop... 225 6e-57 gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ust... 224 6e-57 gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max] 216 1e-54 gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula] 216 2e-54 gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus] 215 3e-54 gi|15242483|ref|NP_199387.1| AtRABA1c (Arabidopsis Rab GTPase ho... 215 4e-54 gi|21313162|ref|NP_083852.1| RAB1B, member RAS oncogene family [... 214 5e-54 gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus] 213 1e-53 gi|131803|sp|P10536|RAB1B_RAT Ras-related protein Rab-1B >gnl|BL... 213 1e-53 gi|126338784|ref|XP_001365286.1| PREDICTED: hypothetical protein... 213 1e-53 gi|15219955|ref|NP_173136.1| RAB11 (ARABIDOPSIS RAB GTPASE HOMOL... 213 2e-53 gi|50413456|ref|XP_457265.1| hypothetical protein DEHA0B07095g [... 211 4e-53 gi|122064946|sp|Q06AU7|RAB1B_PIG Ras-related protein Rab-1B >gnl... 211 5e-53 gi|15229836|ref|NP_187779.1| ATFP8 (Arabidopsis Rab GTPase homol... 211 5e-53 gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein... 211 6e-53 gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 1089... 211 7e-53 gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-li... 211 9e-53 gi|1448941|gb|AAB04618.1| ypt-related protein 209 2e-52 gi|114559803|ref|XP_522433.2| PREDICTED: similar to RAB13 protei... 209 3e-52 gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Pich... 209 3e-52 gi|126134463|ref|XP_001383756.1| GTP-binding protein of the rab ... 209 3e-52 gi|68468983|ref|XP_721550.1| putative RAB family GTP binding pro... 209 3e-52 gi|148237538|ref|NP_001083031.1| hypothetical protein LOC1000387... 209 3e-52 gi|123417386|ref|XP_001305092.1| GTP-binding protein YPTM2, puta... 207 8e-52 gi|63102287|gb|AAH94846.1| RAB13 protein [Homo sapiens] 206 2e-51 gi|47223089|emb|CAG07176.1| unnamed protein product [Tetraodon n... 205 5e-51 gi|147834571|emb|CAN69655.1| hypothetical protein [Vitis vinifer... 203 1e-50 >gi|24583041|ref|NP_609289.1| CG3769 CG3769-PA [Drosophila melanogaster] gi|22946025|gb|AAF52775.2| CG3769-PA [Drosophila melanogaster] gi|66770889|gb|AAY54756.1| IP11319p [Drosophila melanogaster] Length = 368 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 368/368 (100%), Positives = 368/368 (100%) Query: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI Sbjct: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 Query: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE Sbjct: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE Sbjct: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 Query: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL Sbjct: 181 QRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGAL 240 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS Sbjct: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 Query: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR Sbjct: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 Query: 361 GKFESVQT 368 GKFESVQT Sbjct: 361 GKFESVQT 368 >gi|114577181|ref|XP_001142891.1| PREDICTED: dynein 2 light intermediate chain isoform 1 [Pan troglodytes] Length = 351 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 176/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK++EL R K Sbjct: 298 PPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|62898425|dbj|BAD97152.1| dynein 2 light intermediate chain isoform 1 variant [Homo sapiens] Length = 351 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 174/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K LR I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-LRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 298 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 345 >gi|40548413|ref|NP_057092.2| dynein 2 light intermediate chain isoform 1 [Homo sapiens] gi|19908231|gb|AAL99216.1| dynein 2 light intermediate chain [Homo sapiens] gi|119620696|gb|EAX00291.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_c [Homo sapiens] Length = 351 Score = 364 bits (935), Expect = 5e-99, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 173/348 (49%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 298 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 345 >gi|126304485|ref|XP_001382193.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 387 Score = 362 bits (931), Expect = 2e-98, Method: Composition-based stats. Identities = 110/369 (29%), Positives = 187/369 (50%), Gaps = 21/369 (5%) Query: 11 HQRLQKMFVKRTEGGESA----TPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK 66 +Q ++ V + G + + ++ +IA E+++ E+++ +GSK Sbjct: 17 NQEVRSFQVLWPDSGLRSAAQLSDTLWEIAKAEVEKREISENGGDGAEVCEKSVFFIGSK 76 Query: 67 CVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEV 125 GKTT I + DR + +PTLALEY++GRR + + + WELG + L+ + Sbjct: 77 NGGKTTIILRCLDR-DEPPKPTLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISI 135 Query: 126 PMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQR 182 P+ L+ +++L+LDLS+P W +E + + +++ K+ + + + Q+ Sbjct: 136 PITNESLRTFSLVLVLDLSKPNDLWPTMESLLQVTKAHVDKLIMKLGKTSTKAASEMRQK 195 Query: 183 TVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLF 242 + + + D E +DP P P++I+G KYD+F FD RK C+ LR ++H G +L+F Sbjct: 196 MWSNMQKDHPDRELIDPFPIPLVIIGSKYDIFQDFDSEKRKIICKTLRFVSHYYGASLMF 255 Query: 243 YSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQS 300 S+ L K +R I L FG +S VD N+PL I G DS S+IG Sbjct: 256 ASKSEALLLK-IRGVINQLAFGIDKS--KSISVDQNKPLFIPAGLDSLSQIGSPPLSENE 312 Query: 301 VERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGL 353 + ++ A ME+ + EK KET DPA+DP + E +DE+R+QK++EL Sbjct: 313 IGKLHAQTPMELWKKVYEKVFPPKSANTSKETRDPARDPQYAESEVDEMRAQKDQELEQY 372 Query: 354 MRDVLLRGK 362 ++ K Sbjct: 373 KKNTSKSWK 381 >gi|22122795|ref|NP_666341.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|73919260|sp|Q8R1Q8|DC1L1_MOUSE Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|19484061|gb|AAH23347.1| Dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] gi|74198263|dbj|BAE35301.1| unnamed protein product [Mus musculus] gi|148677352|gb|EDL09299.1| dynein cytoplasmic 1 light intermediate chain 1 [Mus musculus] Length = 523 Score = 361 bits (928), Expect = 3e-98, Method: Composition-based stats. Identities = 68/373 (18%), Positives = 122/373 (32%), Gaps = 50/373 (13%) Query: 9 SLHQRLQKMFVKRTEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKC 67 L L G Q++ L+E R R P + +L+LG Sbjct: 25 PLANELASGSGGPAAG---DDEDGQNLWSCILSEVSTRSRS----KLPTGKNVLLLGEDG 77 Query: 68 VGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVP 126 GKT+ I + E + LEY + + Q NVW L + LL+ Sbjct: 78 AGKTSLIRR-IQGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFS 135 Query: 127 MRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVER 186 + L+ V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ + Sbjct: 136 LDALSLRDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKL--KIPPEEMKEMEQKLIRD 193 Query: 187 VGQQNKDSE-----------------------------KLDPLPFPVIIVGGKYDVFSGF 217 + + E L PV++V K D S Sbjct: 194 FQEYVEPGEDFPASPQRRTTGAQEDRGDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVL 253 Query: 218 DPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFR 271 + +R G AL++ S K K ++ I +G Sbjct: 254 EKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKI 311 Query: 272 SHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKD 331 VV + + I G D+ KIG ++ ++ + E A+D Sbjct: 312 PAVVVEKDAVFIPAGWDNDKKIGILHENFQTLKVEDNFEDIITKPPVRKFVHEKEIMAED 371 Query: 332 PGFKELVIDEIRS 344 + + + + Sbjct: 372 DQVFLMKLQSLLA 384 >gi|149727957|ref|XP_001499532.1| PREDICTED: hypothetical protein [Equus caballus] Length = 351 Score = 361 bits (928), Expect = 3e-98, Method: Composition-based stats. Identities = 106/348 (30%), Positives = 175/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSDTLWEIAKAEVEKRGSNGSESDGVEIGEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPE---LREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVNKVIMKLGKKNSKASSEMRQKIWSNMQKDHPDREIIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS S+IG + ++ A ME+ + E+ Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSLSQIGSPPVPDNDIGKLHARSPMELWKKVYERLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK++EL R K Sbjct: 298 PPKNTNTLKDIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|149018342|gb|EDL76983.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 361 bits (927), Expect = 4e-98, Method: Composition-based stats. Identities = 68/373 (18%), Positives = 122/373 (32%), Gaps = 50/373 (13%) Query: 9 SLHQRLQKMFVKRTEGGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKC 67 L L G Q++ L+E R R P + +L+LG Sbjct: 25 PLANELASGSGGPAAG---DDEDGQNLWSCILSEVSTRSRS----KLPTGKNVLLLGEDG 77 Query: 68 VGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVP 126 GKT+ I + E + LEY + + Q NVW L + LL+ Sbjct: 78 AGKTSLIRR-IQGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFS 135 Query: 127 MRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVER 186 + L+ V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ + Sbjct: 136 LDALSLRDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKL--KIPPEEMKEMEQKLIRD 193 Query: 187 VGQQNKDSE-----------------------------KLDPLPFPVIIVGGKYDVFSGF 217 + + E L PV++V K D S Sbjct: 194 FQEYVEPGEDFPASPQRRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVL 253 Query: 218 DPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFR 271 + +R G AL++ S K K ++ I +G Sbjct: 254 EKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKI 311 Query: 272 SHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKD 331 VV + + I G D+ KIG ++ ++ + E A+D Sbjct: 312 PAVVVEKDAVFIPAGWDNDKKIGILHENFQTLKIEDNFEDIITKPPVRKFVHEKEIMAED 371 Query: 332 PGFKELVIDEIRS 344 + + + + Sbjct: 372 DQVFLMKLQSLLA 384 >gi|84000073|ref|NP_001033140.1| dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] gi|81673547|gb|AAI09911.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Bos taurus] Length = 351 Score = 361 bits (927), Expect = 4e-98, Method: Composition-based stats. Identities = 109/348 (31%), Positives = 176/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGSSENEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRTKGHNIPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPE---LREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E LDP P P Sbjct: 121 NDLWPTMENLLQATKLNIDKVIMKLGKKNSKAASEMRQKMWSNMQKDHPDRELLDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G + +S VD N+PL I G DS S+IG + ++ A M++ + EK Sbjct: 240 GI--NKSKSICVDQNKPLFITAGLDSLSQIGPPPLPDNDIGKLHARSPMDLWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPAKDP + E +DE+R QK++EL R K Sbjct: 298 PPKSINTLKDVKDPAKDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 345 >gi|26986541|ref|NP_758460.1| dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|20988526|gb|AAH30450.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] gi|24659541|gb|AAH39070.1| Dynein cytoplasmic 2 light intermediate chain 1 [Mus musculus] Length = 351 Score = 361 bits (927), Expect = 5e-98, Method: Composition-based stats. Identities = 108/348 (31%), Positives = 177/348 (50%), Gaps = 17/348 (4%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E+++ E+++ +GSK GKTT I + DR + + +P Sbjct: 2 PSETLWEIAKAEVEKRRSHGSEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDR-DESAKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W+ +E + + +++ K+ + + QR V + + D E +DP P P Sbjct: 121 NDLWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS +IG + ++ A ME+ + +K Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 298 PPKSTGTLKAVQDPARDPQYAESEVDEMRVQKDQELEHYKRSSSKTWK 345 >gi|21955134|ref|NP_665715.1| dynein cytoplasmic 1 light intermediate chain 1 [Rattus norvegicus] gi|73919261|sp|Q9QXU8|DC1L1_RAT Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|6651427|gb|AAF22294.1|AF181992_1 dynein light intermediate chain 1 [Rattus norvegicus] Length = 523 Score = 360 bits (925), Expect = 7e-98, Method: Composition-based stats. Identities = 68/373 (18%), Positives = 122/373 (32%), Gaps = 50/373 (13%) Query: 9 SLHQRLQKMFVKRTEGGESATPSIQDIAGRLA-EEQQRLRQLEATTTPKERTILVLGSKC 67 L L G Q++ R+ E R R P + +L+LG Sbjct: 25 PLANELASGSGGPAAG---DDEDGQNLWSRILREVSTRSRS----KLPTGKNVLLLGEDG 77 Query: 68 VGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVP 126 GKT+ I + E + LEY + + Q NVW L + LL+ Sbjct: 78 AGKTSLIRR-IQGIEEYKKGR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFS 135 Query: 127 MRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVER 186 + L+ V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ + Sbjct: 136 LDALSLRDTLVMLVVDMSKPWTALDSLQKWASVVREHVDKL--KIPPEEMKEMEQKLIRD 193 Query: 187 VGQQNKDSE-----------------------------KLDPLPFPVIIVGGKYDVFSGF 217 + + E L PV++V K D S Sbjct: 194 FQEYVEPGEDFPASPQRRATAAQEDRDDSVVLPLGADTLTHNLGLPVLVVCTKCDAISVL 253 Query: 218 DPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFR 271 + +R G AL++ S K K ++ I +G Sbjct: 254 EKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKI 311 Query: 272 SHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKD 331 VV + + I G D+ KIG ++ ++ + E A+D Sbjct: 312 PAVVVEKDAVFIPAGWDNDKKIGILHENFQTLKIEDNFEDIITKPPVRKFVHEKEIMAED 371 Query: 332 PGFKELVIDEIRS 344 + + + + Sbjct: 372 DQVFLMKLQSLLA 384 >gi|4929589|gb|AAD34055.1|AF151818_1 CGI-60 protein [Homo sapiens] Length = 350 Score = 360 bits (925), Expect = 8e-98, Method: Composition-based stats. Identities = 107/348 (30%), Positives = 172/348 (49%), Gaps = 18/348 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIW-NYAEDHPDHELIDPFPVP 179 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 180 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 238 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 239 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 296 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 297 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 344 >gi|13937753|gb|AAH06969.1| Dynein, cytoplasmic 2, light intermediate chain 1 [Homo sapiens] gi|62822153|gb|AAY14702.1| unknown [Homo sapiens] gi|119620694|gb|EAX00289.1| dynein, cytoplasmic 2, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 352 Score = 359 bits (922), Expect = 2e-97, Method: Composition-based stats. Identities = 107/349 (30%), Positives = 173/349 (49%), Gaps = 18/349 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNK-DSEKLDPLPF 202 W +E + + +++ K+ + + Q+ + + + D E +DP P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPQDHELIDPFPV 180 Query: 203 PVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 P++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L Sbjct: 181 PLVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLA 239 Query: 263 FGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK- 319 FG +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 FGIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKL 297 Query: 320 ------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK+ DPA+DP + E +DE+R QK+ EL R K Sbjct: 298 FPPKSINTLKDIKDPARDPQYAENEVDEMRIQKDLELEQYKRSSSKSWK 346 >gi|118087971|ref|XP_419456.2| PREDICTED: similar to dynein 2 light intermediate chain [Gallus gallus] Length = 637 Score = 357 bits (918), Expect = 5e-97, Method: Composition-based stats. Identities = 115/380 (30%), Positives = 190/380 (50%), Gaps = 24/380 (6%) Query: 2 RLPLIFHSLHQRLQKMFVKRTEGGE------SATPSIQDIAGRLAEEQQRLRQLEATTTP 55 RLP L +RL +R G A ++ DIA E+++ Sbjct: 256 RLPAE-LQLPERLAPFPWRRAAGPGRIAAMPKAGDTLWDIARDEVEKRENNGDDGKRVEV 314 Query: 56 KERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGK-SPQVMNVWELG 114 E+++L +GSK GKTT I + +R E +PTL LEY+FGRR + + WE+G Sbjct: 315 CEKSVLFMGSKNGGKTTIILRCLER-EEVPKPTLVLEYTFGRRARRHNAPKDIAHFWEIG 373 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV--- 171 + +L+ +P+ + ++ AV+L+LDLS+P W +E + R+ +++ K+ Sbjct: 374 GGTSLLELIRIPITVNNIRSFAVVLVLDLSKPNELWMTMENLLQATRNHVNKILAKLEKT 433 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 PE+ ++Q+ + + + D + +DP P P++I+G KYD+F FD +RK R LR Sbjct: 434 DPEVAAEIKQKMQNNLQRDHPDYDLVDPFPIPLVIIGSKYDIFHEFDSEMRKIISRTLRF 493 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 ++H G +L+F S+ L K R I HL FG +S VD ++PL I G DS S Sbjct: 494 VSHYYGASLVFTSKSEALLLK-ARALINHLAFGYDRS--KSVSVDHSKPLFIPAGLDSLS 550 Query: 292 KIGDTGAQS--VERIGATFGMEVPQLQLEK-------QKLKETTDPAKDPGFKELVIDEI 342 +IG + ++ A +E+ + EK L+++ DPA+ + E +D + Sbjct: 551 QIGPPPTSDSNIGKMRANTPLELWKKVFEKTFPPRSFSDLQDSKDPAQVSQYAEYEVDVM 610 Query: 343 RSQKNEELAGLMRDVLLRGK 362 R+QKN+E R+ K Sbjct: 611 RAQKNQEFEQYKRNASKSWK 630 >gi|148679269|gb|EDL11216.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_a [Mus musculus] Length = 527 Score = 357 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 117/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 52 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 107 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 108 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 165 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 166 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 223 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 224 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 283 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 284 EHLDFIQAHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 341 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 342 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 401 Query: 340 DEIRS 344 + + Sbjct: 402 QSLLA 406 >gi|73969477|ref|XP_851613.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 2 [Canis familiaris] Length = 348 Score = 357 bits (916), Expect = 9e-97, Method: Composition-based stats. Identities = 106/348 (30%), Positives = 173/348 (49%), Gaps = 20/348 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKR---GSEGDGLEIGEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 57 Query: 88 TLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 58 TLALEYTYGRRAKGHNIPKDIAHFWELGGGTSLLDLISIPITSDNLRTFSIVLVLDLSKP 117 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +M+ K+ + + Q+ + + + D E +DP P Sbjct: 118 NDLWPTMENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIP 177 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 178 LVIIGSKYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-VRGVINQLAF 236 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS S+IG + ++ A M++ + E+ Sbjct: 237 GIDKS--KSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVF 294 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 295 PPKSTNTLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWK 342 >gi|126341465|ref|XP_001370116.1| PREDICTED: similar to dyenin light chain A [Monodelphis domestica] Length = 520 Score = 356 bits (915), Expect = 1e-96, Method: Composition-based stats. Identities = 73/381 (19%), Positives = 126/381 (33%), Gaps = 51/381 (13%) Query: 7 FHSLHQRLQKMFVKRTE-----GGESATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTI 60 F S L G ++ Q++ L+E R R P + + Sbjct: 10 FSSSPPALTAANGFAPATCTGNGDKAEEDDGQNLWSCILSEVSTRSRS----KLPSGKNV 65 Query: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNA 119 L+LG GKT+ I + R E + EY + + Q NVW L Sbjct: 66 LLLGEDGAGKTSLIGRIQGRPEECKKGR-GAEYLYLSVHDEDRDDQTRCNVWILDGDLYH 124 Query: 120 EQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL 179 + LL+ M + L+ VIL++D+S+P L+ +R+ ++ K+ PE + + Sbjct: 125 KGLLKFAMEANSLRDTLVILVVDMSKPWTALDSLQKWASVVREHIDKL--KIPPEEMKEM 182 Query: 180 EQRTVERVGQQNKDSE----------------------------KLDPLPFPVIIVGGKY 211 EQ+ + + + E L PV++V K Sbjct: 183 EQKLIRDFQEYVEPGEDFPASPQRRSTLQEDKDDSVMLPLGADTLTYNLGVPVLVVCTKC 242 Query: 212 DVFSGFDPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 D S + +R G AL++ S K K ++ I +G Sbjct: 243 DAISVLEKEHDYKDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGF 302 Query: 266 PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKET 325 P VV + + I G D+ KIG ++ ++ + E Sbjct: 303 PF--KIPAVVVEKDAVFIPAGWDNDKKIGILHENFQTLKAEDSFEDIITKPPVRKFVHEK 360 Query: 326 TDPAKDPGFKELVIDE-IRSQ 345 A+D + + Q Sbjct: 361 EIVAEDDQVFLMKQQSQLAKQ 381 >gi|73990373|ref|XP_534236.2| PREDICTED: similar to dynein light chain-A [Canis familiaris] Length = 524 Score = 355 bits (912), Expect = 3e-96, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 119/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSRS----KLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAISLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE---------- 195 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 155 PWTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 196 -------------------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TGSQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG ++ ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIVAEDDQVFLMKLQSLLA 384 >gi|76640631|ref|XP_870073.1| PREDICTED: similar to dynein light intermediate chain 2 isoform 3 [Bos taurus] Length = 492 Score = 354 bits (909), Expect = 6e-96, Method: Composition-based stats. Identities = 73/365 (20%), Positives = 116/365 (31%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEEMRELERKFVKDFQDYVEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V E Sbjct: 249 EHFDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKE 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|109102922|ref|XP_001107231.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 [Macaca mulatta] Length = 365 Score = 354 bits (908), Expect = 7e-96, Method: Composition-based stats. Identities = 101/350 (28%), Positives = 164/350 (46%), Gaps = 15/350 (4%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + ++ +IA E++ E+++ +GSK GKTT I + DR+ Sbjct: 13 PQKIIETLWEIAKAEVEKRGINGSEGDGAEIGEKSVFFIGSKNGGKTTIILRCLDRDRPP 72 Query: 85 TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 G + + WELG + L+ VP+ + L+ +++L+LDLS Sbjct: 73 KMVLFLFFSFSFCHPGWSTPKDIAHFWELGGGTSLLDLISVPITSDTLRTFSLVLVLDLS 132 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPLP 201 +P W +E + + +M+ K+ P+ + Q+ + + + D E +DP P Sbjct: 133 KPNDLWPTMENLLQATKSHVDKMIMKLGKTNPKAASEMRQKIWNNMQKDHPDRELIDPFP 192 Query: 202 FPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHL 261 P++I+G KYD+F F+ RK C+ LR +AH G +L+F S+ L K +R I L Sbjct: 193 VPLVIIGSKYDIFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQL 251 Query: 262 GFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK 319 FG +S VD N+PL I G DS+S+IG + ++ A ME+ + EK Sbjct: 252 AFGIDKS--KSICVDQNKPLLITAGLDSFSQIGSPPVPENDIGKLHAHSPMELWKKVYEK 309 Query: 320 -------QKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 310 LFPPKSINTLKNIKDPARDPQYAESEVDEMRIQKDQELEQYKRSSSKSWK 359 >gi|158254322|gb|AAI54269.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 354 bits (908), Expect = 7e-96, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 117/372 (31%), Gaps = 48/372 (12%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ + + ++ P + +L+ G GKTT ++K EH Sbjct: 22 SNEDDEGQNLWSSIL---SEVSTRSSSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNK 77 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + +VW L + LL+ + L+ + ++D+S Sbjct: 78 KGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMS 136 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK------------ 192 +P L+ LR+ ++ ++ PE +EQR V+ + + Sbjct: 137 RPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRR 194 Query: 193 ----------------DSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 D+ L P++IV K D + + +R Sbjct: 195 APAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIR 254 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G L++ S K K +L + H + +V + + I G D+ Sbjct: 255 RFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSS--PALVVEKDAVFIPSGWDND 312 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEE- 349 KIG + ++ + + A+D + + +++ Sbjct: 313 KKIGILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQVFLMKQQSLLAKQPATP 372 Query: 350 ---LAGLMRDVL 358 R Sbjct: 373 TRGTESPARTAS 384 >gi|114585854|ref|XP_516351.2| PREDICTED: dynein light chain-A isoform 2 [Pan troglodytes] gi|134047749|sp|Q9Y6G9|DC1L1_HUMAN Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) gi|119584837|gb|EAW64433.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_c [Homo sapiens] gi|124297735|gb|AAI31621.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] Length = 523 Score = 354 bits (908), Expect = 8e-96, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 119/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSRS----KLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE---------- 195 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 155 PWTALDSLQKWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 196 -------------------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG ++ ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 384 >gi|126304616|ref|XP_001364330.1| PREDICTED: similar to dynein light intermediate chain 2 [Monodelphis domestica] Length = 493 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 72/357 (20%), Positives = 118/357 (33%), Gaps = 48/357 (13%) Query: 27 SATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ L+E R R P + ILV G GKTT + K EH+ Sbjct: 27 NEEDEGQNLWSSILSEVSTRSRS----KLPSGKNILVFGEDGSGKTTLLAK-LQGAEHSK 81 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + + NVW L + LL+ + LQ+ VI + D+S Sbjct: 82 KGR-GLEYLYLNIHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAETLQETLVIFVADMS 140 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ-------------- 190 +P L+ LR+ +M K+ PE +EQ+ V+ + Sbjct: 141 RPWTVMESLQKWASVLREHIDKM--KIPPEEMRDMEQKFVKDFQEYVEPEEGYQGSPQRR 198 Query: 191 ---------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCL 229 D+ L PV++V K D S + + Sbjct: 199 GPLASAQDGENVILPLGDNMLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHV 258 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R G AL++ S K K +L I H +G H +V + + I G D+ Sbjct: 259 RKFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKDAVFIPAGWDN 316 Query: 290 WSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 KI + ++ + + A+D + + Q Sbjct: 317 EKKIAILHENFTTVKPDDPYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQQSFLAKQ 373 >gi|73919264|sp|Q5RE09|DC1L2_PONPY Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|55726458|emb|CAH89998.1| hypothetical protein [Pongo pygmaeus] Length = 492 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 68/364 (18%), Positives = 114/364 (31%), Gaps = 46/364 (12%) Query: 18 FVKRTEGGESATPS-IQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINK 76 G ++ Q + + + + P + ILV G GKTT + K Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSIL---SEVSTRAGSKLPSGKNILVFGEDGSGKTTLMTK 73 Query: 77 FFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQL 135 EH + LEY + + NVW L + LL+ + L + Sbjct: 74 -LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPET 131 Query: 136 AVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ----- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 132 LVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPEE 189 Query: 191 ------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII----- 221 D+ L PV++V K D S + Sbjct: 190 GCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDE 249 Query: 222 -RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP 280 LR G AL++ S K K +L I H +G H +V + Sbjct: 250 HLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKDA 307 Query: 281 LCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVID 340 + I G D+ KI + ++ + + A+D + Sbjct: 308 VFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQQ 367 Query: 341 EIRS 344 + + Sbjct: 368 SLLA 371 >gi|62896865|dbj|BAD96373.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 119/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSRS----KLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE---------- 195 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 155 PWTALDSLQKWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 196 -------------------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG ++ ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 384 >gi|73957545|ref|XP_536823.2| PREDICTED: similar to Dynein light intermediate chain 2, cytosolic (LIC53/55) (LIC-2) [Canis familiaris] Length = 481 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 73/374 (19%), Positives = 123/374 (32%), Gaps = 52/374 (13%) Query: 7 FHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK 66 F H++ + ++R +++ + L+E R R P + ILV G Sbjct: 3 FLQTHEQTRVFCLRRQGT------TLRFWSSILSEVSTRARS----KLPSGKNILVFGED 52 Query: 67 CVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEV 125 GKTT + K EH + LEY + + NVW L + LL+ Sbjct: 53 GSGKTTLMTK-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKF 110 Query: 126 PMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVE 185 + L + VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 111 AVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEEMRELERKFVK 168 Query: 186 RVGQQ-----------------------------NKDSEKLDPLPFPVIIVGGKYDVFSG 216 D+ L PV++V K D S Sbjct: 169 DFQDYIEPEEGCQGSPQRRGPLTSGPDEENVALPLGDNMLTHNLGIPVLVVCTKCDAVSV 228 Query: 217 FDPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 + LR G AL++ S K K +L I H +G H Sbjct: 229 LEKEHDYRDEHFDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFV 286 Query: 271 RSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAK 330 +V + + I G D+ KI + ++ + + A+ Sbjct: 287 TPALVVEKDAVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAE 346 Query: 331 DPGFKELVIDEIRS 344 D + + + Sbjct: 347 DEQVFLMKQQSLLA 360 >gi|62955307|ref|NP_001017669.1| dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] gi|62531080|gb|AAH93336.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Danio rerio] Length = 498 Score = 352 bits (905), Expect = 2e-95, Method: Composition-based stats. Identities = 57/372 (15%), Positives = 117/372 (31%), Gaps = 48/372 (12%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ + + ++ P + +L+ G GKTT ++K EH Sbjct: 22 SNEDDEGQNLWSSIL---SEVSTRSSSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNK 77 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + +VW L + LL+ + L+ + ++D+S Sbjct: 78 KGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMS 136 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK------------ 192 +P L+ LR+ ++ ++ PE +EQR V+ + + Sbjct: 137 RPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRR 194 Query: 193 ----------------DSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 D+ L P++IV K D + + +R Sbjct: 195 APAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIR 254 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G L++ S K K +L + H + +V + + I G D+ Sbjct: 255 RFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSS--PALVVEKDAVLIPSGWDND 312 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEE- 349 KIG + ++ + + A+D + + +++ Sbjct: 313 KKIGILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQVFLMKQQSLLAKQPATP 372 Query: 350 ---LAGLMRDVL 358 R Sbjct: 373 TRGTESPARTAS 384 >gi|19684163|gb|AAH25959.1| Dynein, cytoplasmic 1, light intermediate chain 2 [Homo sapiens] Length = 492 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 116/365 (31%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|74149501|dbj|BAE36394.1| unnamed protein product [Mus musculus] gi|74183685|dbj|BAE24463.1| unnamed protein product [Mus musculus] gi|74190862|dbj|BAE28215.1| unnamed protein product [Mus musculus] gi|74212500|dbj|BAE30992.1| unnamed protein product [Mus musculus] Length = 492 Score = 352 bits (904), Expect = 2e-95, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 117/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|5453634|ref|NP_006132.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Homo sapiens] gi|3287825|sp|O43237|DC1L2_HUMAN Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|2665836|gb|AAB88513.1| dynein light intermediate chain 2 [Homo sapiens] gi|119603445|gb|EAW83039.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|119603446|gb|EAW83040.1| dynein, cytoplasmic 1, light intermediate chain 2, isoform CRA_a [Homo sapiens] gi|158256964|dbj|BAF84455.1| unnamed protein product [Homo sapiens] Length = 492 Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 116/365 (31%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|62945390|ref|NP_001013398.1| dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] gi|73919263|sp|Q6PDL0|DC1L2_MOUSE Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|35193080|gb|AAH58645.1| Dynein, cytoplasmic 1 light intermediate chain 2 [Mus musculus] Length = 492 Score = 352 bits (903), Expect = 3e-95, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 117/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKKLAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|60422784|gb|AAH89794.1| Dncli2 protein [Rattus norvegicus] Length = 492 Score = 351 bits (901), Expect = 5e-95, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 117/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKDFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|73919262|sp|Q4R5P6|DC1L2_MACFA Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) gi|67970473|dbj|BAE01579.1| unnamed protein product [Macaca fascicularis] Length = 492 Score = 351 bits (901), Expect = 5e-95, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 117/365 (32%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P ++ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKSILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DEIRS 344 + + Sbjct: 367 QSLLA 371 >gi|125822418|ref|XP_691623.2| PREDICTED: hypothetical protein [Danio rerio] Length = 500 Score = 350 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 56/372 (15%), Positives = 116/372 (31%), Gaps = 48/372 (12%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + Q++ + + ++ P + +L+ G GKTT ++K EH Sbjct: 22 SNEDDEGQNLWSSIL---SEVSTRSSSKLPSGKNVLLFGEDGSGKTTLMSK-LQGAEHNK 77 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + +VW L + LL+ + L+ + ++D+S Sbjct: 78 KGR-GLEYLYLNVQDEDIDDLTRCSVWILDGDLYHKGLLKFAVTAESLKDSLAVFVVDMS 136 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK------------ 192 +P L+ LR+ ++ ++ PE +EQR V+ + + Sbjct: 137 RPWTIMESLQKWTSVLREHVDKL--RIPPEEMREMEQRMVKAFQEYVEPEEATPGSPQRR 194 Query: 193 ----------------DSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 D+ L P++IV K D + + +R Sbjct: 195 APAAAGEDESVLLPLADNVLTHNLGIPMLIVCTKCDAVNVLEKEHDYKEEHFDFIQSHIR 254 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G L++ S K K +L + H + +V + + I G D+ Sbjct: 255 RFCLQYGAGLIYTSVKEEKNLDLLYKYMVHKIYDFQFSS--PALVVEKDAVFIPSGWDND 312 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEE- 349 KI + ++ + + A+D + + +++ Sbjct: 313 KKICILHENFTTVRPEDPFEDFITKPPVRKLVHDKEISAEDEQVFLMKQQSLLAKQPATP 372 Query: 350 ---LAGLMRDVL 358 R Sbjct: 373 TRGTESPARTAS 384 >gi|7705853|ref|NP_057225.1| dynein, cytoplasmic 1, light intermediate chain 1 [Homo sapiens] gi|5531813|gb|AAD44481.1| dynein light chain-A [Homo sapiens] Length = 523 Score = 350 bits (899), Expect = 8e-95, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 119/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSRS----KLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE---------- 195 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 155 PWTALDSLQKWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 212 Query: 196 -------------------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TASQEDKDDSVVVPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFFQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLRYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG ++ ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 384 >gi|114051407|ref|NP_001039517.1| hypothetical protein LOC510330 [Bos taurus] gi|86438315|gb|AAI12622.1| Similar to Dynein light intermediate chain 1, cytosolic (Dynein light chain A) (DLC-A) [Bos taurus] Length = 524 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 66/354 (18%), Positives = 119/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSRS----KLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDPYHKGLLKFSLDAISLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE---------- 195 P L+ +R+ ++ K+ PE + +EQ+ V + + E Sbjct: 155 PWTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQRRS 212 Query: 196 -------------------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TASQEDRDDSVLLPLGADTLTQNLGVPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLQYGAALIYASVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG ++ ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 384 >gi|62896705|dbj|BAD96293.1| dynein light chain-A variant [Homo sapiens] Length = 523 Score = 349 bits (896), Expect = 2e-94, Method: Composition-based stats. Identities = 65/354 (18%), Positives = 118/354 (33%), Gaps = 47/354 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSRS----KLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 96 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSK 154 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE---------- 195 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 155 PWTALDSLQKWASVVREHVDKL--KIPPEEMKQIEQKLIRDFQEYVEPGEDFPASPQGRN 212 Query: 196 -------------------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 213 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 272 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 273 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 330 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 KIG + ++ + E A+D + + + + Sbjct: 331 KKIGILHENFQTLKAEDNFEGIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 384 >gi|13591938|ref|NP_112288.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Rattus norvegicus] gi|2494218|sp|Q62698|DC1L2_RAT Cytoplasmic dynein 1 light intermediate chain 2 (Dynein light intermediate chain 2, cytosolic) (LIC53/55) (LIC-2) gi|619665|gb|AAA80334.1| LIC-2 gi|149032345|gb|EDL87236.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_b [Rattus norvegicus] Length = 497 Score = 348 bits (894), Expect = 3e-94, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 116/362 (32%), Gaps = 48/362 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKDFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRD 248 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL++ S K K +L I H +G H +V + Sbjct: 249 EHLDFIQAHLRGFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTIPALVVEKD 306 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 307 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 366 Query: 340 DE 341 E Sbjct: 367 QE 368 >gi|114577183|ref|XP_515438.2| PREDICTED: dynein 2 light intermediate chain isoform 2 [Pan troglodytes] Length = 334 Score = 347 bits (892), Expect = 5e-94, Method: Composition-based stats. Identities = 104/336 (30%), Positives = 173/336 (51%), Gaps = 17/336 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKSVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ + L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITSDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMQKDHPDRELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKNEEL 350 LK+ DPA+DP + E +DE+R QK++ L Sbjct: 298 PPKSINMLKDIKDPARDPQYAESEVDEMRIQKDQVL 333 >gi|61102732|ref|NP_001012683.1| dynein 2 light intermediate chain isoform 3 [Homo sapiens] Length = 334 Score = 342 bits (879), Expect = 2e-92, Method: Composition-based stats. Identities = 103/333 (30%), Positives = 169/333 (50%), Gaps = 17/333 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E++ E+ + +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDR-DEPPKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GRR + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + +++ K+ + + Q+ + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYDVF F+ RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS+ +IG + ++ A ME+ + EK Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIRSQKN 347 LK+ DPA+DP + E +DE+R QK+ Sbjct: 298 PPKSINTLKDIKDPARDPQYAENEVDEMRIQKD 330 >gi|71895537|ref|NP_001025744.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Gallus gallus] gi|53126839|emb|CAG30989.1| hypothetical protein [Gallus gallus] Length = 488 Score = 341 bits (876), Expect = 4e-92, Method: Composition-based stats. Identities = 68/356 (19%), Positives = 116/356 (32%), Gaps = 47/356 (13%) Query: 27 SATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 S Q++ L+E R R P + ILV G GKTT + K EH Sbjct: 23 SEEEEGQNLWSSILSEVSTRSRS----KLPSGKNILVFGDDGSGKTTLMAK-IQGAEHGK 77 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + LEY + + Q NVW L + LL+ + LQ V+ + D+S Sbjct: 78 KGR-GLEYLYLNIHDEDRDDQTRCNVWILDGDLYNKGLLKFAVSAESLQDTIVVFVADMS 136 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ-------------- 190 +P L+ L++ ++ K+ PE +EQ+ ++ + Sbjct: 137 RPWTVMESLQKWASVLQEHIDKL--KIPPEEMRDMEQKFIKEFQEYVEPEEGYQGSPQRR 194 Query: 191 --------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 ++ L PV++V K D S + +R Sbjct: 195 GPSSGQEDESVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHIR 254 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K +L I H +G +V + + I G D+ Sbjct: 255 RFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FQFTTPALVVEKDAVFIPAGWDNE 312 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 KI + ++ + + A+D + + Q Sbjct: 313 KKIAILHENFTTVKPDDAYEDFIAKPPVRKLVHDKELAAEDEQVFLMKQQSFLAKQ 368 >gi|148237454|ref|NP_001090295.1| dynein, cytoplasmic, light intermediate polypeptide 2 [Xenopus laevis] gi|112419317|gb|AAI22489.1| MGC154222 protein [Xenopus laevis] Length = 487 Score = 340 bits (874), Expect = 6e-92, Method: Composition-based stats. Identities = 68/362 (18%), Positives = 115/362 (31%), Gaps = 48/362 (13%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 T G Q + L++ R P + ILV G GKTT + K Sbjct: 15 TPGAGDEEDEGQSLWSSILSDVSTSARS----KLPSGKNILVFGEDGSGKTTLMAK-LQG 69 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 EH + LEY + + NVW L + LL+ + + + + Sbjct: 70 AEHNKKGR-GLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESISETVAVF 128 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------- 190 + D+S+P L LR+ ++ K+ PE LEQ+ ++ + Sbjct: 129 VGDMSRPWTIMESLLKWASVLREHIDKL--KIPPEEMRELEQKIIKDFQEYVEPEEALSG 186 Query: 191 --------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKH 224 D+ L PV++V K D S + Sbjct: 187 SPQRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDF 246 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 +R G AL++ S K K +L I H + H R+ +V + + I Sbjct: 247 IQSHIRKFCLQYGSALIYTSVKEEKNLDLLYKYIVHKTYN--FHFNRAAMVVEKDSVFIP 304 Query: 285 FGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IR 343 G D+ KIG + ++ + + A+D + + Sbjct: 305 AGWDNEKKIGILHENFSTVKPEDAYEDFIVKPPVRKLVHDKEVAAEDEQVFLMKQQSYLA 364 Query: 344 SQ 345 Q Sbjct: 365 KQ 366 >gi|148234050|ref|NP_001080155.1| cytoplasmic dynein light-intermediate chain [Xenopus laevis] gi|28280005|gb|AAH45030.1| Dnclic1-prov protein [Xenopus laevis] Length = 508 Score = 339 bits (871), Expect = 2e-91, Method: Composition-based stats. Identities = 68/361 (18%), Positives = 119/361 (32%), Gaps = 47/361 (13%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + S Q++ L+E R R P + +L+LG GKT+ I K Sbjct: 25 SGATASEDEDGQNLWSSILSEVSTRSRS----KLPFGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ M ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDDDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK------- 192 ++D+S+P L+ +R+ ++ K+ PE +E+R V + + Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKL--KIPPEEMREMEERIVRHFQEYVEPGDELPT 196 Query: 193 ---------------------DSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHT 225 D L PV++V K D S + Sbjct: 197 SPQRRNTSSDECDDSVILPLADDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFI 256 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 +R G AL++ S K K ++ I +G VV + + I Sbjct: 257 QSHIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYG--FQFKMPAVVVEKDAVFIPA 314 Query: 286 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRS 344 G D+ KIG +V ++ + E A+D + + Sbjct: 315 GWDNDKKIGILHENFQTLKPEDTFEDVITKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAK 374 Query: 345 Q 345 Q Sbjct: 375 Q 375 >gi|125986967|ref|XP_001357246.1| GA17674-PA [Drosophila pseudoobscura] gi|54645577|gb|EAL34315.1| GA17674-PA [Drosophila pseudoobscura] Length = 368 Score = 339 bits (870), Expect = 2e-91, Method: Composition-based stats. Identities = 294/368 (79%), Positives = 331/368 (89%), Gaps = 1/368 (0%) Query: 1 MRLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTI 60 MRLP IF S H+R+ +MF K TEGG++ATPSIQDIAGRLAEEQQRLRQLEAT+ PKERT+ Sbjct: 1 MRLPQIFLSWHKRILRMFEKSTEGGDNATPSIQDIAGRLAEEQQRLRQLEATSMPKERTL 60 Query: 61 LVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAE 120 LVLGSKCVGK+TAINKFFDREEH TRPTLALEYSFGRRIGSG+SPQV+NVWELGSLDNA+ Sbjct: 61 LVLGSKCVGKSTAINKFFDREEHTTRPTLALEYSFGRRIGSGRSPQVINVWELGSLDNAD 120 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 QLLEVPMRTHGLQQLAV +M+DLSQPQRFWTDLECAYKGLR T+Q+++ ++TPELRE LE Sbjct: 121 QLLEVPMRTHGLQQLAVFIMVDLSQPQRFWTDLECAYKGLRVTSQELLARMTPELRETLE 180 Query: 181 QRTVERVGQQN-KDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGA 239 QRT+ERVG QN +D L+ LPFPV+IVGGKYDVF DP ++K CRCLRSMAH IGGA Sbjct: 181 QRTLERVGHQNKEDLGTLELLPFPVVIVGGKYDVFMALDPSLKKAICRCLRSMAHHIGGA 240 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 LLFYSQK+PKL+KVLRDTI H+GFGSP+HPFRSHV D NEPL +WFGTDSWS+IGDTGAQ Sbjct: 241 LLFYSQKVPKLSKVLRDTISHMGFGSPSHPFRSHVTDHNEPLSVWFGTDSWSRIGDTGAQ 300 Query: 300 SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLL 359 SVERIGATFG+ VPQLQLEKQ + DPAKDPGFKE +IDE+R+QKNEELA +MRDVLL Sbjct: 301 SVERIGATFGVAVPQLQLEKQLQQVPQDPAKDPGFKESLIDEMRAQKNEELATIMRDVLL 360 Query: 360 RGKFESVQ 367 RGKFESVQ Sbjct: 361 RGKFESVQ 368 >gi|118085958|ref|XP_418767.2| PREDICTED: similar to dyenin light chain A [Gallus gallus] gi|2494217|sp|Q90828|DC1L1_CHICK Cytoplasmic dynein 1 light intermediate chain 1 (Dynein light intermediate chain 1, cytosolic) (Dynein light chain A) (DLC-A) (LIC57/59) gi|510249|emb|CAA55698.1| dyenin light chain A [Gallus sp.] Length = 515 Score = 337 bits (866), Expect = 5e-91, Method: Composition-based stats. Identities = 67/356 (18%), Positives = 121/356 (33%), Gaps = 48/356 (13%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R P +++L+LG GKT+ I K E + Sbjct: 31 EEDDGQNLWSCILSEVSTRSRS----KLPSGKSVLLLGEDGAGKTSLIGK-IQGIEEYKK 85 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 +EY + + Q NV L + LL+ M + L+ ++L++D+S+ Sbjct: 86 GR-GMEYLYLNVHDEDRDDQTRCNVRILDGDLYHKGLLKFAMEANSLKDTLIMLVVDMSR 144 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE---------- 195 P L+ +R+ ++ K+ PE + +EQ+ V + + E Sbjct: 145 PWTAMDSLQKWASVVREHIDKL--KIPPEEMKEMEQKLVRDFQEYVEPGEDFPASPQRRN 202 Query: 196 -------------------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLR 230 L PV++V K D S + +R Sbjct: 203 TSLQEDKDDSVILPLGADTLTCNLGIPVVVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 262 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G P + VV + + I G D+ Sbjct: 263 RFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPFNV--PAVVVEKDAVFIPAGWDND 320 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 KIG + + ++ + E A+D + + Q Sbjct: 321 KKIGILHENFQTLKAEDSFEDSIRKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 376 >gi|118403726|ref|NP_001072301.1| hypothetical protein LOC779754 [Xenopus tropicalis] gi|111305599|gb|AAI21354.1| Dynein, cytoplasmic 1, light intermediate chain 1 [Xenopus tropicalis] Length = 508 Score = 337 bits (866), Expect = 6e-91, Method: Composition-based stats. Identities = 66/361 (18%), Positives = 121/361 (33%), Gaps = 47/361 (13%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + S Q++ L+E R R P + +L+LG GKT+ I K Sbjct: 25 SGATASEDEDGQNLWSSILSEVSTRSRS----KLPSGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ M ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFAMDPSSVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE---- 195 ++D+S+P L+ +R+ ++ K+ PE + +E++ V + + E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHVDKL--KIPPEEMKEMEEKIVRNFQEYVEPGEEFPA 196 Query: 196 ------------------------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHT 225 L PV++V K D S + Sbjct: 197 SPQKRNTSSDEQDDSVILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFI 256 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 +R G AL++ S K K ++ I +G + VV + + I Sbjct: 257 QSHIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYGFLFN--MPAVVVEKDAVFIPA 314 Query: 286 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRS 344 G D+ KIG ++ ++ + E A+D + + Sbjct: 315 GWDNDKKIGILHENFQTLKPEDTFEDIITKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAK 374 Query: 345 Q 345 Q Sbjct: 375 Q 375 >gi|47230523|emb|CAF99716.1| unnamed protein product [Tetraodon nigroviridis] Length = 463 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 61/343 (17%), Positives = 111/343 (32%), Gaps = 44/343 (12%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L++ R ++ P + ILV G GKTT + K + EH + LEY + Sbjct: 1 SSILSDVSTR----SSSKLPSGKNILVFGEDGSGKTTLMAK-LEGAEHNKKGR-GLEYLY 54 Query: 96 GRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + NVW L + LL+ + L + ++D+S+P L+ Sbjct: 55 LSVHDEDRDDLTRCNVWILDGDLYHKGLLKFAVSAKSLSDCLAVFVVDMSRPWIIMDSLQ 114 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------------------ 190 LRD ++ K+ P++ +EQ+ V+ + Sbjct: 115 KWSSVLRDHLDKL--KIEPDVMREMEQKMVKAFQEYSEPEDANSSSPQRRAPTAGEDEAV 172 Query: 191 ---NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGGALL 241 ++ L PV++V K D S + +R G L Sbjct: 173 VLPLGENTLTHNLGIPVLVVCTKCDAVSVLEKEHDYKEEHFDFIQSHIRKFCLQYGAGLF 232 Query: 242 FYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSV 301 + S K K +L I H + +V + + I G D+ KI Sbjct: 233 YTSVKEEKNLDLLYKYIVHKLYD--FQFTTPALVVEKDAVFIPSGWDNEKKIAILHENLS 290 Query: 302 ERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 + ++ + E A+D + + + Sbjct: 291 TVRPEDPFEDFIAKPPVRKLVHEKEINAEDEQVFLMKQQSLLA 333 >gi|63101480|gb|AAH94488.1| LOC733238 protein [Xenopus laevis] Length = 480 Score = 334 bits (856), Expect = 9e-90, Method: Composition-based stats. Identities = 65/362 (17%), Positives = 113/362 (31%), Gaps = 50/362 (13%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 G Q + L++ R P + ILV G GKTT + K Sbjct: 10 ALGAGGEEDEGQSLWSSILSDVSTSARS----KLPSGKNILVFGEDGSGKTTLVAK-LQG 64 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 EH + LEY + + NVW L + LL+ + + + + Sbjct: 65 AEHNKKGR-GLEYLYLNIHDEDRDDLTRCNVWILDGDLYHKGLLKFALPAESIGETVAVF 123 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ--------- 190 + D+S+P L LR+ ++ K+ PE LEQ+ ++ + Sbjct: 124 VGDMSRPWTIMESLLKWASVLREHIDKL--KIPPEEIRELEQKIIKDFQEYVEPEDALSG 181 Query: 191 --------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKH 224 D+ L PV++V K D S + Sbjct: 182 SPQRRGPTSSGTEDENIVLPLGDNILTHNLGIPVLVVCTKCDAVSVLEKEHDYKDEHFDF 241 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 +R G AL++ S K K +L I H + + + +V + + I Sbjct: 242 IQSHIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYNFHFNC--AAMVVEKDSVFIP 299 Query: 285 FGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IR 343 G D+ KIG + ++ + + A+D + + Sbjct: 300 AGWDNEKKIGILHENFS--KPEDAYEDFIVKPPVRKLVHDKEVAAEDEQVFLMKQQSYLA 357 Query: 344 SQ 345 Q Sbjct: 358 KQ 359 >gi|114585856|ref|XP_001167584.1| PREDICTED: dynein light chain-A isoform 1 [Pan troglodytes] Length = 472 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 63/346 (18%), Positives = 113/346 (32%), Gaps = 49/346 (14%) Query: 35 IAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYS 94 +AGR E + T P G GKT+ I + E + LEY Sbjct: 1 MAGREGEHETLDPGPAGTRPPS-------GEDGAGKTSLI-RKIQGIEEYKKGR-GLEYL 51 Query: 95 FGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDL 153 + + Q NVW L + LL+ + L+ V+L++D+S+P L Sbjct: 52 YLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTALDSL 111 Query: 154 ECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE------------------ 195 + +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 112 QKWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNTASQEDKD 169 Query: 196 -----------KLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGG 238 L PV++V K D S + +R G Sbjct: 170 DSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGA 229 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA 298 AL++ S K K ++ I +G VV + + I G D+ KIG Sbjct: 230 ALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDNDKKIGILHE 287 Query: 299 QSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 ++ ++ + E A+D + + + + Sbjct: 288 NFQTLKAEDNFEDIITKPPVRKFVHEKEIMAEDDQVFLMKLQSLLA 333 >gi|148228995|ref|NP_001082059.1| cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] gi|11992258|gb|AAG42486.1|AF317841_1 cytoplasmic dynein light-intermediate chain 1 [Xenopus laevis] Length = 508 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 116/359 (32%), Gaps = 43/359 (11%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + S Q++ L+E R R P + +L+LG GKT+ I K Sbjct: 25 SGDTASEDEDGQNLWSSILSEVSTRSRS----KLPSGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMME----------KVTPELREILE--------- 180 ++D+S+P L+ +R+ ++ K+ +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 181 QRTVERVGQ-------QNKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCR 227 QR + + L PV++V K D S + Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G VV + + I G Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYG--FQFNMPAVVVEKDAVFIPAGW 316 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 D+ KIG ++ ++ + E A+D + + Q Sbjct: 317 DNDKKIGILHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 375 >gi|49523112|gb|AAH75172.1| DLIC1 protein [Xenopus laevis] Length = 508 Score = 330 bits (847), Expect = 1e-88, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 116/359 (32%), Gaps = 43/359 (11%) Query: 22 TEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDR 80 + S Q++ L+E R R P + +L+LG GKT+ I K Sbjct: 25 SGDTASEDEDGQNLWSSILSEVSTRSRS----KLPSGKNVLLLGEDGAGKTSLIGK-LQG 79 Query: 81 EEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVIL 139 E + +EY + + Q NVW L + LL+ ++ ++L Sbjct: 80 IEEYKKGR-GMEYLYINVHDEDRDDQTRCNVWILDGDLYHKGLLKFATDPSNVRDTLIML 138 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMME----------KVTPELREILE--------- 180 ++D+S+P L+ +R+ ++ K+ +E +E Sbjct: 139 VVDMSRPWLALDSLQKWASVIREHIDKLKIPPEEMREMEEKIVRNFQEYVEPGEEFPASP 198 Query: 181 QRTVERVGQ-------QNKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCR 227 QR + + L PV++V K D S + Sbjct: 199 QRRNTSSEERDDSIILPLGEDTLTHNLGIPVVVVCTKCDAISILEKEHDYRDEHFDFIQS 258 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +R G AL++ S K K ++ I +G VV + + I G Sbjct: 259 HIRKFCLQYGAALIYTSIKENKNIDIVYKYIVQQLYG--FQFNMPAVVVEKDAVFIPAGW 316 Query: 288 DSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE-IRSQ 345 D+ KIG ++ ++ + E A+D + + Q Sbjct: 317 DNDRKIGILHENFQTLKLEDTFEDIIIKPPVRKFVHEKEIVAEDDQVFLMKQQSQLAKQ 375 >gi|109128832|ref|XP_001085468.1| PREDICTED: dynein, cytoplasmic, light intermediate polypeptide 2 [Macaca mulatta] Length = 497 Score = 329 bits (844), Expect = 2e-88, Method: Composition-based stats. Identities = 73/370 (19%), Positives = 119/370 (32%), Gaps = 53/370 (14%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 131 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEKMRELERKFVKDFQDYMEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGK-------YDVFSGFD 218 D+ L PV++V K + SG + Sbjct: 189 EGCQGSPQRRGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKVRARGLLAWLGSGSE 248 Query: 219 PIIRK----HTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 R+ LR G AL++ S K K +L I H +G H + Sbjct: 249 HAFREKNVRIFDSHLRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYG--FHFTTPAL 306 Query: 275 VDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGF 334 V + + I G D+ KI + ++ + + A+D Sbjct: 307 VVEKDAVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQV 366 Query: 335 KELVIDEIRS 344 + + + Sbjct: 367 FLMKQQSLLA 376 >gi|74227767|dbj|BAE35717.1| unnamed protein product [Mus musculus] Length = 341 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 101/329 (30%), Positives = 169/329 (51%), Gaps = 17/329 (5%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA ++++ E+++ +GSK GKTT I + DR + + +P Sbjct: 2 PSETLWEIAKAEVQKRRSHGSEGDGAEIGEKSLFFIGSKNGGKTTIILRCLDR-DESAKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W+ +E + + +++ K+ + + QR V + + D E +DP P P Sbjct: 121 NDHWSTMENLLQATKSHVDKVIMKLGKTSSKASAEMRQRMWSVVQKDHPDRELIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-IRGVINQLAF 239 Query: 264 GSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-- 319 G +S VD N+PL I G DS +IG + ++ A ME+ + +K Sbjct: 240 GIDKS--KSICVDQNKPLFITAGLDSLCQIGSPPVPDSDIGKLQAHSPMELWKKVYDKLF 297 Query: 320 -----QKLKETTDPAKDPGFKELVIDEIR 343 LK DPA+DP + E +DE+R Sbjct: 298 PPKSTGTLKAVQDPARDPQYAESEVDEMR 326 >gi|4884075|emb|CAB43233.1| hypothetical protein [Homo sapiens] Length = 318 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 101/317 (31%), Positives = 161/317 (50%), Gaps = 17/317 (5%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGK 103 E+++ +GSK GKTT I + DR + +PTLALEY++GRR Sbjct: 2 GINGSEGDGAEFAEKSVFFIGSKNGGKTTIILRCLDR-DEPPKPTLALEYTYGRRAKGHN 60 Query: 104 S-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 + + + WELG + L+ +P+ L+ +++L+LDLS+P W +E + + Sbjct: 61 TPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKS 120 Query: 163 TAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDP 219 +++ K+ + + Q+ + + + D E +DP P P++I+G KYDVF F+ Sbjct: 121 HVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQDFES 180 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 RK C+ LR +AH G +L+F S+ L K LR I L FG +S VD N+ Sbjct: 181 EKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-LRGVINQLAFGIDKS--KSICVDQNK 237 Query: 280 PLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-------QKLKETTDPAK 330 PL I G DS+ +IG + ++ A ME+ + EK LK+ DPA+ Sbjct: 238 PLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPKSINTLKDIKDPAR 297 Query: 331 DPGFKELVIDEIRSQKN 347 DP + E +DE+R QK+ Sbjct: 298 DPQYAENEVDEMRIQKD 314 >gi|66770953|gb|AAY54788.1| IP11519p [Drosophila melanogaster] Length = 358 Score = 328 bits (841), Expect = 4e-88, Method: Composition-based stats. Identities = 324/338 (95%), Positives = 326/338 (96%), Gaps = 3/338 (0%) Query: 34 DIAGRLAEEQQRL---RQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLA 90 ++ G L RQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLA Sbjct: 21 NLPGLNLSSPMSLYLLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLA 80 Query: 91 LEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFW 150 LEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFW Sbjct: 81 LEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFW 140 Query: 151 TDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGK 210 TDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGK Sbjct: 141 TDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGK 200 Query: 211 YDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 270 YDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF Sbjct: 201 YDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF 260 Query: 271 RSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAK 330 RSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAK Sbjct: 261 RSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAK 320 Query: 331 DPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQT 368 DPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQT Sbjct: 321 DPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQT 358 >gi|94733315|emb|CAK11122.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632687|emb|CAM56700.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 489 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 117/361 (32%), Gaps = 44/361 (12%) Query: 17 MFVKRTEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 + +E Q++ L+E R R P + ++V+G GKTT + Sbjct: 14 VNNSTSESQNPEEEDGQNLWSSILSEVSTRSRS----KLPSGKNVVVMGEVGSGKTTLVA 69 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K E + LEY + Q N W L + L + + L+ Sbjct: 70 K-LQGVEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLED 127 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 ++ ++DLS+P L+ +RD ++ +V PE LE R ++ + Sbjct: 128 SLILFVVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPG 185 Query: 191 ----------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------R 222 ++ L P+++V K D S + Sbjct: 186 SDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHL 245 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 +R G ALL+ S K K +L + H +G P + V + + Sbjct: 246 DFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS--PAQVVEKDSVF 303 Query: 283 IWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEI 342 I G D+ KI +V ++ + E A+D + + + Sbjct: 304 IPSGWDNEKKIAILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQVFLVKLQSL 363 Query: 343 R 343 Sbjct: 364 L 364 >gi|120538637|gb|AAI29197.1| Dncli2 protein [Danio rerio] Length = 485 Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 117/361 (32%), Gaps = 44/361 (12%) Query: 17 MFVKRTEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 + +E Q++ L+E R R P + ++V+G GKTT + Sbjct: 10 VNNSTSESQNPEEEDGQNLWSSILSEVSTRSRS----KLPSGKNVVVMGEVGSGKTTLVA 65 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K E + LEY + Q N W L + L + + L+ Sbjct: 66 K-LQGVEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLED 123 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 ++ ++DLS+P L+ +RD ++ +V PE LE R ++ + Sbjct: 124 SLILFVVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPG 181 Query: 191 ----------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------R 222 ++ L P+++V K D S + Sbjct: 182 SDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHL 241 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 +R G ALL+ S K K +L + H +G P + V + + Sbjct: 242 DFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS--PAQVVEKDSVF 299 Query: 283 IWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEI 342 I G D+ KI +V ++ + E A+D + + + Sbjct: 300 IPSGWDNEKKIAILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQVFLVKLQSL 359 Query: 343 R 343 Sbjct: 360 L 360 >gi|156231071|ref|NP_001095898.1| dynein, cytoplasmic, light intermediate chain 1 [Danio rerio] gi|94733316|emb|CAK11123.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] gi|126632686|emb|CAM56699.1| novel protein similar to vertebrate dynein, cytoplasmic, light intermediate polypeptide 2 (DNCLI2) [Danio rerio] Length = 501 Score = 322 bits (827), Expect = 2e-86, Method: Composition-based stats. Identities = 65/361 (18%), Positives = 117/361 (32%), Gaps = 44/361 (12%) Query: 17 MFVKRTEGGESATPSIQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 + +E Q++ L+E R R P + ++V+G GKTT + Sbjct: 16 VNNSTSESQNPEEEDGQNLWSSILSEVSTRSRS----KLPSGKNVVVMGEVGSGKTTLVA 71 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K E + LEY + Q N W L + L + + L+ Sbjct: 72 K-LQGVEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKGLQKFAISLENLED 129 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 ++ ++DLS+P L+ +RD ++ +V PE LE R ++ + Sbjct: 130 SLILFVVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEHRLTKQFQEYVEPG 187 Query: 191 ----------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------R 222 ++ L P+++V K D S + Sbjct: 188 SDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAISTLEKEHDYKDEHL 247 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 +R G ALL+ S K K +L + H +G P + V + + Sbjct: 248 DFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS--PAQVVEKDSVF 305 Query: 283 IWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEI 342 I G D+ KI +V ++ + E A+D + + + Sbjct: 306 IPSGWDNEKKIAILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQAEDDQVFLVKLQSL 365 Query: 343 R 343 Sbjct: 366 L 366 >gi|149639419|ref|XP_001508928.1| PREDICTED: similar to dyenin light chain A [Ornithorhynchus anatinus] Length = 471 Score = 322 bits (825), Expect = 3e-86, Method: Composition-based stats. Identities = 59/319 (18%), Positives = 106/319 (33%), Gaps = 43/319 (13%) Query: 64 GSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQL 122 G GKT+ I K + + +EY + + Q NVW L + L Sbjct: 21 GEDGAGKTSLIGK-MQGIDEYKKGR-GMEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGL 78 Query: 123 LEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQR 182 L+ M + L+ V+L++D+S+P L+ +R+ ++ K+ PE + +EQ+ Sbjct: 79 LKFAMDANSLKDTLVMLVVDMSKPWTALDSLQKWASVVREHIDKL--KIPPEEMKEMEQK 136 Query: 183 TVERVGQQNKDSE-----------------------------KLDPLPFPVIIVGGKYDV 213 + + + E L PV++V K D Sbjct: 137 LIRDFQEYIEPGEDFPASPQRRNTTSQEDKDDSVILPLGADTLTYNLGIPVLVVCTKCDA 196 Query: 214 FSGFDPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA 267 S + +R G AL++ S K K ++ I +G P Sbjct: 197 ISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPF 256 Query: 268 HPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTD 327 VV + + I G D+ KIG ++ ++ + E Sbjct: 257 --KIPAVVVEKDAVFIPAGWDNDKKIGILHENFQTLKAEDSFEDIIIKPPVRKFVHEKEI 314 Query: 328 PAKDPGFKELVIDE-IRSQ 345 A+D + + Q Sbjct: 315 VAEDDQVFLMKQQSQLAKQ 333 >gi|118118597|ref|XP_001236227.1| PREDICTED: hypothetical protein, partial [Gallus gallus] Length = 388 Score = 318 bits (815), Expect = 4e-85, Method: Composition-based stats. Identities = 66/344 (19%), Positives = 114/344 (33%), Gaps = 45/344 (13%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L+E R R P +TILVLG GKTT + K EH + LEY + Sbjct: 1 SSILSEVSTRSRS----KLPSGKTILVLGDNGSGKTTLMAK-LQGAEHGQKGR-GLEYLY 54 Query: 96 GRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + NVW L ++ LL+ + LQ VI ++D+S+P LE Sbjct: 55 LNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAVSAESLQHTIVIFVVDMSRPWTVMESLE 114 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------------------ 190 LR+ ++ K+ PE ++Q+ ++ + Sbjct: 115 KWAGVLREHIDKL--KIPPEEMRGMQQKIIKEFQEYVEPEEAYQGSSQRRGPSSGQENAS 172 Query: 191 ----NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGAL 240 ++ L PV++V K D S + +R G AL Sbjct: 173 VSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEKKRGYREEHFDFIQSHIRRFCLQYGAAL 232 Query: 241 LFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 ++ S K K +L + H +G +V + + I G D+ KI Sbjct: 233 IYTSVKGEKNLDLLYKYLVHKMYG--FQLTTPALVVEKDAVFIPAGWDNEKKIAILHENF 290 Query: 301 VERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 + ++ + A+ + + + Sbjct: 291 TRVKPGYAYEDFIAKPRVRKLVHTELVTAEADQEFLKRMQSLLA 334 >gi|34366439|emb|CAE46207.1| hypothetical protein [Homo sapiens] Length = 335 Score = 317 bits (814), Expect = 6e-85, Method: Composition-based stats. Identities = 62/330 (18%), Positives = 110/330 (33%), Gaps = 47/330 (14%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R P + +L+LG GKT+ I + E + Sbjct: 15 DDEDGQNLWSCILSEVSTRSRS----KLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 69 Query: 87 PTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQ 145 LEY + + Q NVW L + LL+ + L+ V+L++D+S+ Sbjct: 70 GR-GLEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSK 128 Query: 146 PQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE---------- 195 P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 129 PWTALDSLQKWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRN 186 Query: 196 -------------------KLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLR 230 L PV++V K D S + +R Sbjct: 187 TASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIR 246 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSW 290 G AL++ S K K ++ I +G VV + + I G D+ Sbjct: 247 KFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVFIPAGWDND 304 Query: 291 SKIGDTGAQSVERIGATFGMEVPQLQLEKQ 320 KIG ++ ++ Sbjct: 305 KKIGILHENFQTLKAEDNFEDIITKPPVRK 334 >gi|149699641|ref|XP_001496104.1| PREDICTED: similar to dynein light intermediate chain 2, partial [Equus caballus] Length = 490 Score = 315 bits (808), Expect = 3e-84, Method: Composition-based stats. Identities = 68/365 (18%), Positives = 107/365 (29%), Gaps = 48/365 (13%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 15 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 70 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L + Sbjct: 71 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPE 128 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ V+ Sbjct: 129 TLVIFVADMSRPWTVMESLQKWASVLREHIDKM--KIPPEEMRELERKFVKDFQDYIEPE 186 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII---- 221 D+ L PV++V K D S + Sbjct: 187 EGCQGSPQRRGPLTSGPDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRD 246 Query: 222 --RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR G AL+ S K K + I H P Sbjct: 247 EHFDFIQSHLRRFCLQYGAALIDTSVKEAKSLDLKNKCIIHPTSNDPVTSPGKASQSLF- 305 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 G D+ KI + ++ + + A+D + Sbjct: 306 -AFRPAGWDNEKKIAILHENFTTVKPEDVYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 364 Query: 340 DEIRS 344 + + Sbjct: 365 QSLLA 369 >gi|41053533|ref|NP_956774.1| hypothetical protein LOC393452 [Danio rerio] gi|32766386|gb|AAH55198.1| Zgc:63673 [Danio rerio] Length = 358 Score = 315 bits (807), Expect = 4e-84, Method: Composition-based stats. Identities = 111/355 (31%), Positives = 175/355 (49%), Gaps = 19/355 (5%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTT-----PKERTILVLGSKCVGKTTAINKFF 78 + ++ ++ DIA ++ E P +RT+ +GSK GKTT + +F Sbjct: 1 MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFL 60 Query: 79 DREEHATRPTLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAV 137 +R + +PTLALEY+FGRR + + ++WELG + L+++P+ + L+V Sbjct: 61 ER-DETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSV 119 Query: 138 ILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL-EQRTVERVGQQNKDSEK 196 +L+LDLS+P W +E R+ +++ + +QR + + D E Sbjct: 120 VLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDREL 179 Query: 197 LDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRD 256 + P P P++IVG K+D+F FD RK C+ LR +AH G +L+F S K R Sbjct: 180 ISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRS 239 Query: 257 TICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVPQ 314 I L FG+ +S D ++PL I G+DS S+IG A V+ + A ++ + Sbjct: 240 FINQLAFGTERP--KSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWK 297 Query: 315 LQLEKQK-------LKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 EK KE DP KDP F E +ID IR+QK++EL R+ K Sbjct: 298 KVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWK 352 >gi|47212778|emb|CAF95543.1| unnamed protein product [Tetraodon nigroviridis] Length = 400 Score = 311 bits (798), Expect = 5e-83, Method: Composition-based stats. Identities = 60/340 (17%), Positives = 107/340 (31%), Gaps = 41/340 (12%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L+E R P + +LV+G GKTT + K + + LEY + Sbjct: 1 STILSEVSTHSRS----KLPSGKNVLVMGEVGSGKTTLVAK-LQGVDEYMKGR-GLEYLY 54 Query: 96 GRRIGSGKSPQ-VMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 N W L + L V + + +++ +D+S+P L+ Sbjct: 55 FSVHDDDIDDHARCNAWVLDGDLYHKGLQGVAVPVDSIGNTLLLITVDMSRPWNALDSLQ 114 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ------------------------ 190 R+ ++ +V PE LE V++ + Sbjct: 115 KWAAVAREHIDKL--RVAPETLRELEHNLVKQFQEYVEPGSGEDGTPQRRSEDEESILLP 172 Query: 191 NKDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRCLRSMAHLIGGALLFYS 244 DS L PV++V K D + LR G +L++ S Sbjct: 173 LGDSTLTHNLGIPVVVVCTKCDAIGTLEKEHDYRDEHLDFIQSHLRRFCLQYGASLVYTS 232 Query: 245 QKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERI 304 K K +L + H +G P V + + I G D+ KI Sbjct: 233 VKEMKNLDILYKYLVHRLYGFPFPC--PAQVVERDAVFIPSGWDNEKKIAILHENFQTFK 290 Query: 305 GATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDEIRS 344 +V ++ + E A+D + + + + Sbjct: 291 SDDTFEDVIVKPPVRKIVHEKEIQAEDDQVFLVKLQSLLA 330 >gi|157119433|ref|XP_001653379.1| conserved hypothetical protein [Aedes aegypti] gi|108883162|gb|EAT47387.1| conserved hypothetical protein [Aedes aegypti] Length = 347 Score = 311 bits (797), Expect = 5e-83, Method: Composition-based stats. Identities = 172/351 (49%), Positives = 233/351 (66%), Gaps = 10/351 (2%) Query: 19 VKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF 78 + T +IQDIA +L E + P ERTI VLGSK GK+T IN+F Sbjct: 5 NSISSMEPDTTETIQDIAMKLVTEHMKQESSLTGG-PTERTIFVLGSKGAGKSTLINRFL 63 Query: 79 DREEHATRPTLALEYSFGRRIGSGK--SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLA 136 DR++ RPTLALEYSFGRR SG+ + NVWELGSL N+ QL+EVP+R+HGL A Sbjct: 64 DRDDIT-RPTLALEYSFGRRTASGQGAQKNICNVWELGSLVNSNQLIEVPVRSHGLAAFA 122 Query: 137 VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEK 196 +++LDLSQP R WTDL+C GL+ + +P+ +++R ++VG ++D Sbjct: 123 AVIVLDLSQPDRLWTDLQCILNGLKQAISK---NCSPKEVSEMQERMKQKVGLDHEDLNT 179 Query: 197 LDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRD 256 L+ LPFPVIIVGGKYD F D I+KH CRCLRS++H IG AL+FY+ K L+K++RD Sbjct: 180 LEILPFPVIIVGGKYDAFQNVDSEIKKHVCRCLRSISHAIGAALIFYTSKNASLSKMIRD 239 Query: 257 TICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQ 316 + HLGFGSP++PF++ +D N P+ + FG DSW KIG T S ERIG ++ ++PQ+ Sbjct: 240 AMNHLGFGSPSNPFKATALDHNGPIVVPFGGDSWEKIGVTPTNS-ERIGMSYSAQIPQVG 298 Query: 317 LEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQ 367 EK + + DPAKD GFKE VIDE+R+QK++EL L++D +R KFE+VQ Sbjct: 299 TEKVSIPD--DPAKDGGFKERVIDELRAQKDDELMRLLKDTEMRMKFEAVQ 347 >gi|119114551|ref|XP_319337.3| AGAP010165-PA [Anopheles gambiae str. PEST] gi|116118470|gb|EAA13896.3| AGAP010165-PA [Anopheles gambiae str. PEST] Length = 339 Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats. Identities = 176/346 (50%), Positives = 234/346 (67%), Gaps = 9/346 (2%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEH 83 T +IQDIA +L EQ R ATT P ERT+ VLGSK VGK+T IN+F DR++ Sbjct: 1 MEVDTTETIQDIAIKLVTEQLRNESRLATT-PTERTLFVLGSKGVGKSTLINRFLDRDDV 59 Query: 84 ATRPTLALEYSFGRRIGSGK--SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 RPTLALEYSFGR+ SG+ + NVWELGSL N+ QL+E+P+R+HGLQ + I+ML Sbjct: 60 P-RPTLALEYSFGRKTASGQGAQKNICNVWELGSLANSSQLIEMPIRSHGLQTFSCIVML 118 Query: 142 DLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLP 201 DLSQP R WTDLE GL+ + E +++ T +R+G+++ D L+ P Sbjct: 119 DLSQPDRLWTDLESVLNGLKQATAKH---AVAGQIEEMKELTAQRIGKEHPDLSTLELFP 175 Query: 202 FPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHL 261 FP++IVGGKYD++ D IRKH CRCLRS+AH +G AL++YS K L+K++RDT+ HL Sbjct: 176 FPIVIVGGKYDIYQNQDSEIRKHVCRCLRSIAHTLGAALVYYSAKNSSLSKLVRDTMNHL 235 Query: 262 GFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQK 321 GFGSP++PFR+ D + PL I FG DSW++IG T + S ERIG +F ++PQL + Sbjct: 236 GFGSPSNPFRAASFDHSSPLAIPFGADSWARIGVTPSNS-ERIGLSFSTQIPQLPIGNGG 294 Query: 322 LKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGKFESVQ 367 + DPAKD GFKE IDE+RSQK+EEL +++D +R KFE VQ Sbjct: 295 IL-PDDPAKDAGFKEASIDELRSQKDEELMYVLKDTEIRMKFEVVQ 339 >gi|118118595|ref|XP_424147.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 374 Score = 307 bits (786), Expect = 1e-81, Method: Composition-based stats. Identities = 70/347 (20%), Positives = 115/347 (33%), Gaps = 52/347 (14%) Query: 16 KMFVKRTEG-------GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCV 68 + R EG + PS + L+E R R P +TILVLG Sbjct: 37 PVPQARNEGWGCGLLRYGAVRPSGPSTSSILSEVSTRSRS----KLPSGKTILVLGDNGS 92 Query: 69 GKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPM 127 GKTT + K EH + LEY + + NVW L ++ LL+ + Sbjct: 93 GKTTLMAK-LQGAEHGQKGR-GLEYLYLNVHDEDRDDHTRCNVWILDGDIYSKGLLKFAV 150 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERV 187 LQ VI ++D+S+P LE LR+ ++ K+ PE ++Q+ ++ Sbjct: 151 SAESLQHTIVIFVVDMSRPWTAMESLEKWAGVLREHIDKL--KIPPEETRGMQQKIIKEF 208 Query: 188 GQQ----------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP 219 + ++ L PV++V K D S + Sbjct: 209 QEYVEPEEAYQGSSQRRGPSSGQENASVSLSLGENVLTHNLGIPVLVVCTKCDTVSVLEK 268 Query: 220 ------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 +R G AL++ S K K +L + H +G Sbjct: 269 KRGYREEHFDFIQSHIRRFCLQYGAALIYTSVKGEKNLDLLYKYLVHKMYG--FQLTTPA 326 Query: 274 VVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQ 320 +V + + I G D+ KI + ++ Sbjct: 327 LVVEKDAVFIPAGWDNEKKIAILHENFTRVKPGYAYEDFIAKPRVRK 373 >gi|115712844|ref|XP_794270.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115941395|ref|XP_001177851.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 363 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 184/350 (52%), Gaps = 16/350 (4%) Query: 27 SATPSIQDIAGRLAEEQ--QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + SI DIA AE++ ++ E IL +GSK GKT+ I +F ++ E A Sbjct: 4 NKEKSIWDIAILEAEQKHATESKEQGGEAKGSENHILFIGSKNAGKTSIILRFLEK-EEA 62 Query: 85 TRPTLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 +PT+ALEY+FGRR + ++WELG QL E+P+ + ++++++DL Sbjct: 63 PKPTIALEYTFGRRAKGHNMVKDICHIWELGGGTFLSQLTEIPLSEDTIMSSSLMVVMDL 122 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSEKLDPL 200 SQP W +E KG D +Q++ K P++++ +++R +R+G + D + LDP Sbjct: 123 SQPYELWHTMETLIKGALDHVEQVISKAARNDPKIQDKIKERAWKRIGIDHPDRDMLDPF 182 Query: 201 PFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICH 260 P P++IVG KYDV+ FDP RK + LR +AH G AL F S K L ++ + H Sbjct: 183 PLPLVIVGTKYDVYQDFDPEKRKVISKTLRFIAHNYGAALQFSSNKTDALMSRTKNLVSH 242 Query: 261 LGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQSVERIGATFGMEVPQL--- 315 L FG+ ++ +D N+P+ + FG DS +IG + R A +++ + Sbjct: 243 LAFGTTL-SLKTISIDPNKPISVPFGLDSLEQIGLPPVADDDLGRSNARTPLDLWKQAFT 301 Query: 316 --QLEKQKLKET-TDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 +K +K DP+KDP + E +D +R QKN+EL + R K Sbjct: 302 SYFPQKSTIKAIVEDPSKDPQYAEAAVDNMREQKNKELERYRKQAERRAK 351 >gi|149478160|ref|XP_001513530.1| PREDICTED: similar to glibenclamide-sensitive voltage-gated potassium channel, partial [Ornithorhynchus anatinus] Length = 449 Score = 303 bits (778), Expect = 9e-81, Method: Composition-based stats. Identities = 103/329 (31%), Positives = 162/329 (49%), Gaps = 19/329 (5%) Query: 30 PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTL 89 ++ +IA E++++ + E+++ +GSK GKTT I + DR + RPTL Sbjct: 1 ETLWEIARAEVEKKEKPGGGDEG----EKSVFFVGSKNGGKTTIILRCLDR-DEPARPTL 55 Query: 90 ALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQR 148 ALEY+FGRR + + + WELG + L +P+ L+ A + LDLS+P Sbjct: 56 ALEYTFGRRARGHNTPKDIAHFWELGGGTSLLDLARIPITADSLRTFATDIFLDLSRPSE 115 Query: 149 FWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVG 208 W E + +R + + + P R RT V + + D E +DP P P++I+G Sbjct: 116 LWLTAEHLLRAVRTHVENLGQ---PGTRAAATPRTWSPVPEDHPDREFIDPFPIPLVIIG 172 Query: 209 GKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAH 268 KYDVF D RK CR LR +AH G L+F + L K R I HL FG Sbjct: 173 SKYDVFQNLDSEKRKVICRTLRFLAHHHGATLMFTGKSEALLLKT-RSVISHLAFGVGVD 231 Query: 269 PFRSHVVDFNEPLCIWFGTDSWSKIGDTGA--QSVERIGATFGMEVPQLQLE-------K 319 ++ +D N+PL I G DS+S+IG + + ++ +E+ + K Sbjct: 232 RSKALTLDQNKPLFIPAGLDSFSQIGPPPSAAGDIGKLRVQTPLELWKEVYNKAFPLQTK 291 Query: 320 QKLKETTDPAKDPGFKELVIDEIRSQKNE 348 K+ DP +DP + E +D +R+QK++ Sbjct: 292 SDRKDLKDPGRDPQYAEREVDAMRAQKDQ 320 >gi|18860035|ref|NP_572694.1| Dlic2 CG1938-PA, isoform A [Drosophila melanogaster] gi|24641224|ref|NP_727500.1| Dlic2 CG1938-PC, isoform C [Drosophila melanogaster] gi|24641226|ref|NP_727501.1| Dlic2 CG1938-PD, isoform D [Drosophila melanogaster] gi|16182605|gb|AAL13531.1| GH06357p [Drosophila melanogaster] gi|22832089|gb|AAF48011.2| CG1938-PA, isoform A [Drosophila melanogaster] gi|22832090|gb|AAN09288.1| CG1938-PC, isoform C [Drosophila melanogaster] gi|22832091|gb|AAN09289.1| CG1938-PD, isoform D [Drosophila melanogaster] Length = 493 Score = 302 bits (774), Expect = 3e-80, Method: Composition-based stats. Identities = 61/376 (16%), Positives = 115/376 (30%), Gaps = 45/376 (11%) Query: 19 VKRTEGGESATPSIQ-DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKF 77 + + + ++ + E ++ +T P +++LVLG GKTT I K Sbjct: 13 TSSFTMKKKDAAAEKENLWSAILNE---VQTQGSTKLPSNKSVLVLGDNATGKTTLIAK- 68 Query: 78 FDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLA 136 E + + LEY++ + + VW L LL + Sbjct: 69 LQGVEDPKKGS-GLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHYALNETNYAHTL 127 Query: 137 VILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV-TPELREILEQRTVERVGQQNKDSE 195 VIL + ++QP + L K L + E T + + D + Sbjct: 128 VILTVSMTQPWGWLEQLNHWIKVLGQHIDSLQLDAKEKEAARQRLTTTWQSYCEVGDDLD 187 Query: 196 K--------------------------LDPLPFPVIIVGGKYDVFSGFDP------IIRK 223 + L +++V K D + + Sbjct: 188 PGSPVKRTMRNNSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYEYRDEHFD 247 Query: 224 HTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCI 283 + +R+ G +L + S K K VL + H +G P +V + + I Sbjct: 248 FIQQWIRNFCLRHGTSLFYTSVKEDKNCDVLYKYLTHRIYGLPFRT--PALVVEKDAVLI 305 Query: 284 WFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKL--KETTDPAKDPGFKELVIDE 341 G DS KI ++ + ++ + +E +D E Sbjct: 306 PAGWDSLKKISILYENMHGVKAENPYTDIIKSPPTRKAVSNREAEVQTEDEQAFLARQQE 365 Query: 342 IRSQKNEEL-AGLMRD 356 I Q ++ +R Sbjct: 366 ILKQGDQVRGESPLRS 381 >gi|156400842|ref|XP_001639001.1| predicted protein [Nematostella vectensis] gi|156226126|gb|EDO46938.1| predicted protein [Nematostella vectensis] Length = 366 Score = 301 bits (771), Expect = 6e-80, Method: Composition-based stats. Identities = 106/356 (29%), Positives = 180/356 (50%), Gaps = 20/356 (5%) Query: 24 GGESATPSIQDIAGR----LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD 79 G + + +I D+A L E ++ E++ +E I ++GSK GKT+ + +F D Sbjct: 2 GDKRSDKTIWDLAIEERDYLLNEAKKKGTQESSPHGEEAGIFLIGSKNAGKTSMVLRFLD 61 Query: 80 REEHATRPTLALEYSFGRRIGSGK-SPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 R + +PT AL+Y+FGR+ + V ++WELG +L+++P+ ++ L++I Sbjct: 62 R-DEVPKPTTALDYTFGRKAKGHNIAKDVGHIWELGGGTFLSKLIDIPINVDSVRGLSII 120 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV---TPELREILEQRTVERVGQQNKDSE 195 + LDLS P W +E ++ ++M+++ P + L E+ G + D Sbjct: 121 IFLDLSLPNELWHTMETLLNQVKKRVHKVMDELAAKNPSAVQKLRNDAWEKFGTDHPDKS 180 Query: 196 KLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLR 255 ++P P P+ IVGGKYD++ FDP RK R LR +AH G L F+S K L R Sbjct: 181 FVEPFPIPLAIVGGKYDIYQDFDPEKRKMISRALRFIAHCNGAHLQFFSTKTEGLVGRSR 240 Query: 256 DTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG--AQSVERIGATFGMEVP 313 I HL F + ++ VD N+P+ + G DS ++IG ++ + R+ + ++ Sbjct: 241 GMIGHLLFHT--SLGKAIGVDHNKPIIVSAGQDSLAQIGAPPVASEDLGRLQSRNPYDLW 298 Query: 314 QL------QLEKQKLK-ETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + EK K + DP+KDP + E +D +R QK+EEL R + + Sbjct: 299 KAAYATFFPPEKSKQHSDREDPSKDPQYFEAAVDAMRKQKDEELDRYRRQAERKAR 354 >gi|125981409|ref|XP_001354708.1| GA15140-PA [Drosophila pseudoobscura] gi|54643019|gb|EAL31763.1| GA15140-PA [Drosophila pseudoobscura] Length = 499 Score = 298 bits (763), Expect = 5e-79, Method: Composition-based stats. Identities = 64/383 (16%), Positives = 121/383 (31%), Gaps = 45/383 (11%) Query: 12 QRLQKMFVKRTEGGESATPSIQ-DIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGK 70 Q + + + ++ + E ++ +T P +++LVLG GK Sbjct: 8 QTGSNALTSSFTTKKKDAAAEKENLWSAILNE---VQTQGSTKLPANKSVLVLGDNATGK 64 Query: 71 TTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRT 129 TT I K E + + LEY++ + + VW L LL + Sbjct: 65 TTLIAK-LQGVEDPKKGS-GLEYAYIDVKDEYRDDMTRLGVWVLDGDPGHTNLLHFALNE 122 Query: 130 HGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM-MEKVTPELREILEQRTVERVG 188 VIL + ++QP + L K L + + +E E+ T + Sbjct: 123 TNYAHTLVILTVSMTQPWGWLEQLNHWIKVLGQHIESLPLEAKDKEMARQRLATTWQSYC 182 Query: 189 QQNKDSEK--------------------------LDPLPFPVIIVGGKYDVFSGFDP--- 219 + D + + L +++V K D + + Sbjct: 183 EVGDDLDPGSPVKRTMRNNSIDEDDLLPLTEDALITNLGLDIVVVVTKTDYMTTLEKEYE 242 Query: 220 ---IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 + +RS G +L + S K K +L + H +G P +V Sbjct: 243 YRDEHFDFIQQWIRSFCLRTGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRT--PALVV 300 Query: 277 FNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKL--KETTDPAKDPGF 334 + + I G DS KI + +V + ++ + +E +D Sbjct: 301 EKDAVLIPAGWDSLKKISILYENMHGIKAESPYSDVIKAPPTRKAVSNREVEVQTEDEQT 360 Query: 335 KELVIDEIRSQKNEEL-AGLMRD 356 EI Q ++ +R Sbjct: 361 FLARQQEILKQAGQDRGESPLRS 383 >gi|148921657|gb|AAI46707.1| Dncli2 protein [Danio rerio] Length = 433 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 57/314 (18%), Positives = 101/314 (32%), Gaps = 39/314 (12%) Query: 63 LGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ-VMNVWELGSLDNAEQ 121 +G GKTT + K E + LEY + Q N W L + Sbjct: 1 MGEVGSGKTTLVAK-LQGVEEYMKGR-GLEYLYFNVHDDDIDDQSRCNAWVLDGDLYHKG 58 Query: 122 LLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQ 181 L + + L+ ++ ++DLS+P L+ +RD ++ +V PE LE Sbjct: 59 LQKFAISLENLEDSLILFVVDLSRPWLALDSLQKWGSVVRDFVDKL--RVPPETMRELEH 116 Query: 182 RTVERVGQQ--------------------------NKDSEKLDPLPFPVIIVGGKYDVFS 215 R ++ + ++ L P+++V K D S Sbjct: 117 RLTKQFQEYVEPGSDLDAVPQRRNPESDEESVLLPLGENTLTHNLGLPIVVVCTKCDAIS 176 Query: 216 GFDPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 + +R G ALL+ S K K +L + H +G P + Sbjct: 177 TLEKEHDYKDEHLDFIQSHIRRFCLQYGAALLYTSMKENKNLDLLYKYLVHRLYGFPFNS 236 Query: 270 FRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPA 329 V + + I G D+ KI +V ++ + E A Sbjct: 237 --PAQVVEKDSVFIPSGWDNEKKIAILHENFQMVKAEDSFEDVIVKPPVRKFVHEKEVQA 294 Query: 330 KDPGFKELVIDEIR 343 +D + + + Sbjct: 295 EDDQVFLVKLQSLL 308 >gi|91083677|ref|XP_968528.1| PREDICTED: similar to CG1938-PA, isoform A [Tribolium castaneum] Length = 475 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 59/367 (16%), Positives = 115/367 (31%), Gaps = 45/367 (12%) Query: 26 ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHAT 85 + S +++ ++ ++ P + +LVLG GKTT + K E Sbjct: 7 KPTDDSKKNLWSQIL---SDVQNNGNPKLPSCKQVLVLGDNECGKTTIVAK-LQGVEDPK 62 Query: 86 RPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLS 144 + + LEY++ + Q ++VW L LL+ + Q VIL + ++ Sbjct: 63 KGS-GLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHTDLLKFALNEETFQHTLVILTVTMT 121 Query: 145 QPQRFWTDLECAYKGLRDTAQQMMEKVT-PELREILEQRTVERVGQQN------------ 191 P L+ L D ++ V + R + + + Sbjct: 122 APWSILEQLQHWASVLADHLDKLKLDVDLRQNRRQHIVKMWQEYVEPGDELDPASPMKRS 181 Query: 192 -----------------KDSEKLDPLPFPVIIVGGKYDVFSGFDPII------RKHTCRC 228 + + L +++V K D + + Sbjct: 182 SRNFGDGEDGLEEQTSLPEGTLTNNLGLDIVVVVTKTDYIQTLEKEHDYRDEHLDFMQQW 241 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 +R G AL + S K K +L + H +G P +V + + I G D Sbjct: 242 IRKFCLQYGAALFYTSAKEDKNCDLLYKYLTHRIYGFPFRT--PALVVEKDAVFIPAGWD 299 Query: 289 SWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKL-KETTDPAKDPGFKELVIDEIRSQKN 347 + +KI + ++ ++ + +ET A+D +I Sbjct: 300 NMNKIRILYENLHTCKPDDYFRDIIVQPATRKTINRETELLAEDEQAFLARQQQILFAGG 359 Query: 348 EELAGLM 354 L G Sbjct: 360 NNLQGPR 366 >gi|47218225|emb|CAF97089.1| unnamed protein product [Tetraodon nigroviridis] Length = 359 Score = 290 bits (743), Expect = 1e-76, Method: Composition-based stats. Identities = 92/355 (25%), Positives = 158/355 (44%), Gaps = 18/355 (5%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEH 83 + ++ ++ D+A ++ ERT+ ++GSK GKT+ + K DR + Sbjct: 1 MPKISSDTLWDLAAAEVNSRESEDDYGERNVAVERTVFLMGSKAGGKTSILLKCLDR-DE 59 Query: 84 ATRPTLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLD 142 ++PTLALEY+FGRR + + ++WELG L+++P+ + L+ L+VIL++D Sbjct: 60 PSKPTLALEYTFGRRARGHNTPKDIAHIWELGGGTFLSDLVQIPITSADLKFLSVILIVD 119 Query: 143 LSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQ-------QNKDSE 195 LS+P W E + + ++ D E Sbjct: 120 LSKPNELWGTTEKLLQVTQAHLEKAFSMAQKAQTAKPAATHQTATQSAARVLPADYPDRE 179 Query: 196 KLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLR 255 + P P++IVG KYD+F FD +K + LR +AH +L+ Q Sbjct: 180 LISAFPVPLLIVGSKYDIFQEFDSDKKKLIAQMLRFVAHSYAASLIVIHQXXXXXXXXXX 239 Query: 256 DTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVE--RIGATFGMEVP 313 ++ +D +PL I G+DS+S+IG A V+ + A ++ Sbjct: 240 XX-XXXXXXXXXXXXKTVSMDLTKPLIIPAGSDSFSQIGSPCAADVDIASLHARNPKDLW 298 Query: 314 QL------QLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 + EK+ ++ DPAKDP + E ID +R+QK++EL R+ + Sbjct: 299 RKVCGCVFPPEKEHQQDLKDPAKDPQYSEPQIDAMRAQKDQELEQYKRNAAKTWQ 353 >gi|157128066|ref|XP_001661298.1| dynein light intermediate chain [Aedes aegypti] gi|108872707|gb|EAT36932.1| dynein light intermediate chain [Aedes aegypti] Length = 494 Score = 288 bits (738), Expect = 3e-76, Method: Composition-based stats. Identities = 59/366 (16%), Positives = 113/366 (30%), Gaps = 49/366 (13%) Query: 13 RLQKMFVKRTEGG-ESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKT 71 ++ + +++ + ++ +T P +++LVLG GKT Sbjct: 8 TTSQVNGITATTPRKKDIDPKENLWSAIL---SEVQTQSSTKLPSNKSVLVLGDNASGKT 64 Query: 72 TAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTH 130 T I K E + + LEY++ + + VW L LL+ + Sbjct: 65 TLIAK-LQGVEDPKKGS-GLEYAYIDVRDEYRDDVTRLGVWILDGDPGHTNLLKYALNET 122 Query: 131 GLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ 190 VIL L ++ P + LE K L D + K+ PE R+ QR V Sbjct: 123 NYAHTLVILTLSMTTPWSWVDQLEHWIKMLDDHIAGL--KIDPEERQQCRQRLVTVWQSY 180 Query: 191 ------------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP- 219 + L V++V K D + + Sbjct: 181 CDTIDELDPGSPIKRTNRLSSVDDDLDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKE 240 Query: 220 -----IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 + +R + G +L + S K K +L + H +G P + Sbjct: 241 LDYRDEHFDFMQQWIRRFCLVYGASLFYTSVKEDKNCDLLYKYLTHRIYGLPFRT--PAL 298 Query: 275 VDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKL--KETTDPAKDP 332 + + + I G D+ KI + ++ ++ + +E ++ Sbjct: 299 IVEKDAVLIPAGWDNMKKINILYENMQSCKPDDYYNDIIAQPPSRKTVSNREIEVQTEEE 358 Query: 333 GFKELV 338 Sbjct: 359 QAFLSR 364 >gi|148679270|gb|EDL11217.1| dynein, cytoplasmic 1 light intermediate chain 2, isoform CRA_b [Mus musculus] Length = 458 Score = 284 bits (728), Expect = 6e-75, Method: Composition-based stats. Identities = 60/365 (16%), Positives = 102/365 (27%), Gaps = 82/365 (22%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKEFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------ 219 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDSVALPLGDNVLTHNLGIPVLVVCTKCDAMSVLEKEHDYRD 248 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR I + + Sbjct: 249 EHLDFIQAHLRRFCLQ---------------------CILGML---------------KD 272 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 273 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 332 Query: 340 DEIRS 344 + + Sbjct: 333 QSLLA 337 >gi|149032344|gb|EDL87235.1| dynein, cytoplasmic, light intermediate polypeptide 2, isoform CRA_a [Rattus norvegicus] Length = 455 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 59/365 (16%), Positives = 100/365 (27%), Gaps = 85/365 (23%) Query: 18 FVKRTEGGESATPS-IQDIAGR-LAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 G ++ Q + L+E R R P + ILV G GKTT + Sbjct: 17 PAVAAAGDLTSEEEEGQSLWSSILSEVSTRARS----KLPSGKNILVFGEDGSGKTTLMT 72 Query: 76 KFFDREEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQ 134 K EH + LEY + + NVW L + LL+ + L++ Sbjct: 73 K-LQGAEHGKKGR-GLEYLYLSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLRE 130 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ---- 190 VI + D+S+P L+ LR+ +M K+ PE LE++ ++ Sbjct: 131 TLVIFVADMSRPWTIMESLQKWASVLREHIDKM--KIPPEEMRDLERKFMKDFQDYIEPE 188 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDP------ 219 D+ L PV++V K D S + Sbjct: 189 EGCQGSPQRRGPLTSGSDEDNVALPLGDNVLTHNLGIPVLVVCTKCDAVSILEKEHDYRD 248 Query: 220 IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 LR + Sbjct: 249 EHLDFIQAHLRGFCLQF---------------------------------------VEKD 269 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVI 339 + I G D+ KI + ++ + + A+D + Sbjct: 270 AVFIPAGWDNEKKIAILHENFTTVKPEDAYEDFIVKPPVRKLVHDKELAAEDEQVFLMKQ 329 Query: 340 DEIRS 344 + + Sbjct: 330 QSLLA 334 >gi|156544153|ref|XP_001606117.1| PREDICTED: similar to ENSANGP00000001598 [Nasonia vitripennis] Length = 486 Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 106/357 (29%), Gaps = 47/357 (13%) Query: 25 GESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHA 84 + + + ++ + +++ P + +LVLG GKTT I K E Sbjct: 20 KDKSLENEDNLWSSIL---AQVQNSSNNKLPSNKNVLVLGDNESGKTTLIAK-LQGVEDP 75 Query: 85 TRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDL 143 + + LEY++ + Q ++VW L LL+ + V+L+ + Sbjct: 76 KKGS-GLEYAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLKFALNAKRFPNTLVMLVAAM 134 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMME-----KVTPELREILEQRTVERVGQQN------- 191 + P L+ + L D ++ K T + ++ + + Sbjct: 135 TTPWALLDQLQFWSRVLGDHIDKLASDNDDFKQTWQDCRQQIKKKWQDYTEPGDDLDPGS 194 Query: 192 -------------------KDSEKLDPLPFPVIIVGGKYDVFSGFDP------IIRKHTC 226 D L +++V K D S + Sbjct: 195 PLRRTSRNLDDESVDNLPLPDGVLTTNLGLDIVVVITKTDYMSTLEKEHDYRDEHFDFMQ 254 Query: 227 RCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFG 286 + +R G L + S K K +L + H + P +V + + I G Sbjct: 255 QWIRRFCLQYGAGLFYTSVKEDKNCDLLYKYLTHRIYSLPFRT--PALVVEKDAVLIPAG 312 Query: 287 TDSWSKIGDTGAQSVERIGATFGMEVPQLQLE--KQKLKETTDPAKDPGFKELVIDE 341 D+ KI + +V K ++ +D E Sbjct: 313 WDNMKKISILHENLQSMKPDDYYRDVIVKPPSNRKSVQRQVEVQTEDEQAFLTRQQE 369 >gi|115916182|ref|XP_795494.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115974436|ref|XP_001184479.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 483 Score = 282 bits (723), Expect = 2e-74, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 118/363 (32%), Gaps = 50/363 (13%) Query: 20 KRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD 79 + E+ Q++ + E P ++ILVLG GKTT +++ Sbjct: 11 ASSAEKENDDDEPQNLWTSILSEVSSHSSS---KLPSCKSILVLGEDETGKTTLLSR-LQ 66 Query: 80 REEHATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVI 138 E + LEY + + VW L + E LL + L+ + VI Sbjct: 67 GVEDPKKG-YGLEYLYLDVRDEDRDDTTRCGVWILAGENEHEDLLRYALTADNLEHMLVI 125 Query: 139 LMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQ-------- 190 + +D+ +P L+ + +R + ++ PE LEQR V++ Sbjct: 126 IAVDMCRPWNIMDSLQKWTQVIRRHVDSL--RIPPEKLRELEQRLVQQFQAYTEPETGQD 183 Query: 191 -------------------------NKDSEKLDPLPFPVIIVGGKYDVFSGFDPI----- 220 ++ L P+++V K D + + Sbjct: 184 SSVTRRTSGVTKPTGAEDEEAVVLPLGETTLTHNLGVPIVVVVTKSDYVNTLEKEQDYSD 243 Query: 221 -IRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 + +R G AL + S K K +L + H + P + + +V + Sbjct: 244 EHLDFLQQNVRKFCLNYGAALFYVSVKENKNCDLLNRYLLHRLYDFPFNS--AALVVEKD 301 Query: 280 PLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE-TTDPAKDPGFKELV 338 L + G D+ K+ EV + ++ L++ A+D + Sbjct: 302 ALFVPSGWDNLQKVSILYENMANIDPEKPYDEVIIKPVVRRLLQDNKEIIAEDEQVFLMK 361 Query: 339 IDE 341 Sbjct: 362 QQA 364 >gi|156398084|ref|XP_001638019.1| predicted protein [Nematostella vectensis] gi|156225136|gb|EDO45956.1| predicted protein [Nematostella vectensis] Length = 422 Score = 280 bits (718), Expect = 9e-74, Method: Composition-based stats. Identities = 60/333 (18%), Positives = 122/333 (36%), Gaps = 38/333 (11%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQ 106 + + P ++I+++G+ GKTT I+K +E+ ++ LEY++ Sbjct: 8 QSSASRKLPSHKSIILIGNDESGKTTLISKLRGKEDDISKGH-GLEYTYLEVHDEEIDDY 66 Query: 107 V-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 +NVW L + LL+ + + + V++++D S+P L + LR+ Sbjct: 67 TRLNVWILDGDPRNKSLLKYALTPKHARDVLVVMVVDCSRPWAIMESLHSWTEILREHIH 126 Query: 166 QMMEKVTPELREILEQRTVERVGQQ-------------------------NKDSEKLDPL 200 + K++P+ +E++ V++ +++ +D L Sbjct: 127 SL--KLSPKELNEMEEKIVQQFQDYTDTEEASDENRRRSGTKDEDKVVLPLEENVLVDNL 184 Query: 201 PFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVL 254 P+I++ K D + + +R G AL + S K K + Sbjct: 185 GIPMIVLVTKTDCMLSLEKDRDFHDEHFDFIQQHIRRYCLKHGAALFYTSVKENKNCNLF 244 Query: 255 RDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQ 314 + H +G P +V + + I G DS KIG + Sbjct: 245 LKYVLHKIYGLPFKS--PALVVDKDSVFIPSGWDSMKKIGILNEHLKNIHPDDSFDDHII 302 Query: 315 LQLEKQKLKETTDPAKDPGFKELVIDEIRSQKN 347 ++ L+E A++ ++ QKN Sbjct: 303 KPALRKPLQEKEITAEEEQAFLAKQQQLL-QKN 334 >gi|158289563|ref|XP_311261.4| AGAP000723-PA [Anopheles gambiae str. PEST] gi|157018577|gb|EAA06916.4| AGAP000723-PA [Anopheles gambiae str. PEST] Length = 470 Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats. Identities = 63/342 (18%), Positives = 115/342 (33%), Gaps = 49/342 (14%) Query: 36 AGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRPTLALEYSF 95 + L+E Q + T P +++LVLG GKTT I K E + + LEY++ Sbjct: 1 SSILSEVQTQSN----TKLPSNKSVLVLGDNASGKTTLIAK-LQGVEDPKKGS-GLEYAY 54 Query: 96 GRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLE 154 + ++VW L LL+ + VIL L ++ P + L+ Sbjct: 55 IDVRDEYRDDVTRLSVWILDGDPGHNNLLKFALNEQNFPHTLVILTLSMTTPWSWVDQLQ 114 Query: 155 CAYKGLRDTAQQMMEKVTPELREILEQR---TVERVGQQNKDSEK--------------- 196 K L D + K+ PE ++ + R + + D + Sbjct: 115 HWMKILDDHIAGL--KIDPEEKQQCQARLTTEWQNYCETIDDLDPGSPIKRTNRLPSVDD 172 Query: 197 -LDPLPFPVIIV-----------GGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGG 238 LD LP P ++ K D + + + +R + G Sbjct: 173 ELDALPLPEGVLTTNLGLDVVVVVTKTDYMTTLEKELDYRDEHFDFMQQWIRRFCLMYGA 232 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA 298 +L + S K K +L + H +G P +V + + I G D+ KI Sbjct: 233 SLFYTSVKEDKNCDLLYKYLTHRIYGLPFRT--PALVVEKDAVLIPAGWDNMKKISILYE 290 Query: 299 QSVERIGATFGMEVPQLQLEKQKL--KETTDPAKDPGFKELV 338 + ++ ++ + +E+ +D Sbjct: 291 NMQSCKPDDYYNDIIAQPPSRKTVSNRESEIQTEDEQSFLAR 332 >gi|110764069|ref|XP_395283.3| PREDICTED: similar to Dlic2 CG1938-PA, isoform A [Apis mellifera] Length = 470 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 104/328 (31%), Gaps = 42/328 (12%) Query: 24 GGESATPSIQD-IAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREE 82 + P +D + + ++ + P + ILVLG GKTT I K E Sbjct: 17 SKKKEDPENKDNLWSSIL---AEVQNSSSNKLPSNKNILVLGDNESGKTTLIAK-LQGVE 72 Query: 83 HATRPTLALEYSFGRRIGSGKSPQV-MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILML 141 + + LE+++ + Q ++VW L LL + V+L+ Sbjct: 73 DPKKGS-GLEFAYIDVRDDYRDDQTRLSVWVLDGDPGHANLLRFALNAERFPHTLVMLVA 131 Query: 142 DLSQPQRFWTDLECAYKGLRDTAQQM-MEKVTPELREILEQRTVERVGQQNK-------- 192 ++ P L+ L D ++ ++ T + L + + + Sbjct: 132 AMTTPWAILDQLQSWAALLGDHIDKLPLDNDTWQRCRQLNVKKWQDYTEPGDELDPGSPL 191 Query: 193 -------DSEKLDPLPFP-----------VIIVGGKYDVFSGFDPII------RKHTCRC 228 D + +D LP P V++V K D S + + Sbjct: 192 RRTSRNLDDDTMDNLPLPEGVLTTNLGLDVVVVITKTDYMSTLEKEHDYKDEHFDFIQQW 251 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 +R G L + S K K +L + H + P +V + + I G D Sbjct: 252 IRRFCLQYGAGLFYTSAKEDKNCDLLYKYLTHRIYSLPFRT--PALVVEKDAVLIPAGWD 309 Query: 289 SWSKIGDTGAQSVERIGATFGMEVPQLQ 316 + KI + +V Sbjct: 310 NMKKISILHENLQSMKPDDYYRDVIAQP 337 >gi|145237902|ref|XP_001391598.1| hypothetical protein An07g05150 [Aspergillus niger] gi|134076075|emb|CAK39434.1| unnamed protein product [Aspergillus niger] Length = 523 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 62/393 (15%), Positives = 121/393 (30%), Gaps = 52/393 (13%) Query: 13 RLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSK------ 66 + R G ++ PS +D + P E+ +L+LG Sbjct: 3 ASSQNPGSRFGTGNNSRPSSKDGPKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQRE 61 Query: 67 -------CVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSL- 116 + N AL Y++ + + + V + L Sbjct: 62 FLDTLAADSSDPSLSNDKRKGRVPPVANQFALGYTYQDVLDADHEDTLARVSAYLLSEPS 121 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMME 169 + LL+ + + + V+++LD S P + L + LR D + +ME Sbjct: 122 LSFAPLLKPLLTPQSIPETLVVILLDWSDPWTWIRRLREWVRLLRHVLISLDDETKIVME 181 Query: 170 KVTPELREILE------QRTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGF 217 + E R+ + L P L P+ +V D Sbjct: 182 ENLTEWRDRKRGMDSSSGGAQGFTSSAGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKL 241 Query: 218 DPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHP 269 + + +R++ G +L++ + + + L LG S Sbjct: 242 EKDHGWHEEQFDFILQFMRTLLLKHGASLIYTTPFLANSLQSL--IHSSLGIHSLLKRQS 299 Query: 270 FRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDP 328 + +V+D ++ + + DSW KI +E I + +E+ Q E D Sbjct: 300 LKHNVIDRDK-ILVPSNWDSWGKIRIIREGFDMEGISTAWSIEI-QDPPEP-LTNGVDDR 356 Query: 329 AKDPGFKELVID--EIRSQKNEELAGLMRDVLL 359 + D V D + + + RD + Sbjct: 357 SSDEQTANAVDDGTSAVAIFEQTIQDPKRDTSM 389 >gi|62078609|ref|NP_001013962.1| dynein 2 light intermediate chain [Rattus norvegicus] gi|50927372|gb|AAH79201.1| Dynein cytoplasmic 2 light intermediate chain 1 [Rattus norvegicus] Length = 311 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 74/245 (30%), Positives = 126/245 (51%), Gaps = 6/245 (2%) Query: 28 ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + ++ +IA E+++ E+++ +GSK GKTT I + DR + +P Sbjct: 2 PSETLWEIAKAEVEKRRCHGSDGDGMEIGEKSVFFIGSKNGGKTTIILRCLDR-DEPAKP 60 Query: 88 TLALEYSFGRRIGSGKS-PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 TLALEY++GR+ + + + WELG + L+ +P+ L+ +++L+LDLS+P Sbjct: 61 TLALEYTYGRKTKGHNTPKDIAHFWELGGGTSLLDLISIPITVDTLRTFSIVLVLDLSKP 120 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFP 203 W +E + + ++ K+ + + QR + + + D E +DP P P Sbjct: 121 NDLWPTMENLLQATKSHVDKVTMKLGKANSKASSEMRQRMWSVMQKDHPDRELIDPFPIP 180 Query: 204 VIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 ++I+G KYD+F FDP RK C+ LR +AH G +L+F S+ L K +R I L F Sbjct: 181 LVIIGSKYDIFQDFDPEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-MRGVINQLAF 239 Query: 264 GSPAH 268 G Sbjct: 240 GIDKR 244 >gi|115398722|ref|XP_001214950.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191833|gb|EAU33533.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 508 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 124/378 (32%), Gaps = 36/378 (9%) Query: 13 RLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG--SKCVGK 70 ++ R G ++ PS +D + P E+ +L+L S Sbjct: 3 TSTQIPGSRFGAGNNSRPSSKDGPKKNIWSSLLDNVANGKRLP-EKNLLILDTLSANPSD 61 Query: 71 TTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSL-DNAEQLLEVPM 127 + ++ AL Y++ + + + + V + L + LL+ + Sbjct: 62 PSLSDEKRKGRVPPVANQFALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLL 121 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTPELREILE 180 + + V+++LD S P + L + LR D + +ME++ E R+ Sbjct: 122 TPQSIPETLVVILLDWSDPWTWVRRLREWVRLLRHVLVSLDDETKIVMEEMMTEWRDRKR 181 Query: 181 Q----RTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDPII------RKH 224 G + L P L P+ +V D + Sbjct: 182 GMDAAGAQGLSGSGGPVTMPLGPGEWDEGLGIPMCVVCQGADKIEKLEKDHGWHEEEFDF 241 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPFRSHVVDFNEPLC 282 + LR++ G +L++ + + + L LG S + +V+D ++ + Sbjct: 242 ILQFLRTILLKHGASLIYTTPFLANSLQSL--IHSSLGIHSLLKRQSLKHNVIDRDK-IL 298 Query: 283 IWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKELVIDE 341 + DSW KI +E + + +E+ Q E D ++ Sbjct: 299 VPSNWDSWGKIRIIREGFDMEGVSTAWSIEI-QDLPEPLTNGPADDKPEEDPSGMDDRSS 357 Query: 342 IRSQKNEELAGLMRDVLL 359 + + + RD + Sbjct: 358 AVTIFEQTIKDPKRDTSM 375 >gi|71422931|ref|XP_812285.1| dynein light intermediate chain [Trypanosoma cruzi strain CL Brener] gi|70877049|gb|EAN90434.1| dynein light intermediate chain, putative [Trypanosoma cruzi] Length = 422 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 81/369 (21%), Positives = 142/369 (38%), Gaps = 38/369 (10%) Query: 22 TEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDRE 81 + +D+ + L E T E +L++G+ GKT+ + + F Sbjct: 48 PGMPQVTVDPTKDLWQNII-----LNTRENQVTQTEVNVLIVGTSGGGKTSLLRRIFSGV 102 Query: 82 EHAT----------RPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHG 131 ++ +PT AL+YSF RR + + WEL QL EV + Sbjct: 103 NTSSSSVPKSFLRVKPTTALDYSFVRRNDRHIAQV-AHFWELAQGMELSQLCEVVITPEN 161 Query: 132 LQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE---LREILEQRTVERVG 188 + + + +++D S+P W + K + ++ +K+ + + L R VG Sbjct: 162 VHTMVLAIVVDCSEPSTMWDTVVYWMKRVDRRVIEIFQKMRAKGSATPDKLLSRAKRLVG 221 Query: 189 QQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMP 248 ++ D +L P +I+ K D F+G + + K R +R +AH+ G L+F S Sbjct: 222 MEHPDLNRLRLSGVPTMIICNKLDAFAG-EMTMLKTLVRSMRFVAHIYGAYLVFTSDAEA 280 Query: 249 KLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG-----------DTG 297 LR + HL F S + + + D+++ IG TG Sbjct: 281 I---KLRAVMNHLVFVSTFDLKHIELDPERGAVLVIPSADTFADIGEPAVSDMGGLQSTG 337 Query: 298 AQSVERIGATFGMEVPQLQLEKQKLKE----TTDPAKDPGFKELVIDEIRSQKNEELAGL 353 ++R A P Q E + + + GF E +D +R QK +EL Sbjct: 338 DAELDRWKAPLDAMFPAKQSEGRMQNDSFLKRLYDTGENGFGEPTVDAVRKQKEDELEQY 397 Query: 354 MRDVLLRGK 362 + R K Sbjct: 398 RKSAFKREK 406 >gi|121713178|ref|XP_001274200.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] gi|119402353|gb|EAW12774.1| dynein light intermediate chain [Aspergillus clavatus NRRL 1] Length = 509 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 58/382 (15%), Positives = 120/382 (31%), Gaps = 53/382 (13%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKC-------------VGK 70 G ++ PS +D + P E+ +L+LG Sbjct: 2 SGNNSRPSSKDGPKKNIWSSMLDSVANGKRLP-EKNLLILGGTQDTQREFLETLSADTSD 60 Query: 71 TTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSL-DNAEQLLEVPM 127 +T I + AL Y++ + + + + V + L + LL+ + Sbjct: 61 STLIGEKRKGRVPPIANQFALGYTYQDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLL 120 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTPELREILE 180 + + V+++LD S P + L + LR D + +ME++ E R+ Sbjct: 121 TPQSVPETLVVILLDWSDPWTWIRRLREWVRLLRHVLFSLDDETKIVMEEIMTEWRDRKR 180 Query: 181 Q------RTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDPII------R 222 + L P L PV +V D + Sbjct: 181 GMDSGSAGAQGLTSSGGPVTIPLGPGEWDEGLGIPVCVVCQGADKIEKLEKDHGWREEEF 240 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPFRSHVVDFNEP 280 + LR++ G +L++ + + + L LG S + +V+D ++ Sbjct: 241 DFILQFLRTILLKHGASLIYTTPFLANSLQSL--IHSSLGIHSLLKRQSLKHNVIDRDK- 297 Query: 281 LCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQ-LEKQKLKETTDPAKDPGFKELV 338 + + DSW KI +E + + +E+ + +D G Sbjct: 298 ILVPPNWDSWGKIRIIREGFDMEGVSTAWSIEIQDPPEPLPGSVH---YEPQDEGATAAE 354 Query: 339 I-DEIRSQKNEELAGLMRDVLL 359 + + + R+ + Sbjct: 355 DGTSAVTIFEQTITDPKRNASM 376 >gi|119479611|ref|XP_001259834.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] gi|119407988|gb|EAW17937.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181] Length = 505 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 56/382 (14%), Positives = 124/382 (32%), Gaps = 57/382 (14%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG-------------SKCVGK 70 G ++ PS +D + + P E+ +L+LG S Sbjct: 2 SGNNSRPSSKDGSKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQREFIETLSADTSD 60 Query: 71 TTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSL-DNAEQLLEVPM 127 T I++ AL Y++ + + + + V + L + LL+ + Sbjct: 61 PTLISEKRRGRLPPVANQFALGYTYHDVLDADQEDTLARVSAYLLSEPSLSFAPLLKPLL 120 Query: 128 RTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMMEKVTPELREI-- 178 + + V+++LD S P + L + LR D + +ME++ E ++ Sbjct: 121 TPQSVPETLVVILLDWSDPWTWVRRLREWVRLLRHVLISLDDETKIVMEEIMTEWKDRKR 180 Query: 179 -LEQRTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGFDPII------RKHT 225 ++ + P L P+ +V D + Sbjct: 181 GMDSGAQGLASSGGPVTIPPGPGEWDEGLGIPMCVVCQGADKIEKLEKEHGWREEEFDFI 240 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPFRSHVVDFNEPLCI 283 + +R++ G +L + + + + L LG S + +V+D ++ + + Sbjct: 241 LQFMRTILLKHGASLTYTTTFLANSLQSL--IHSSLGIHSLLKRQSLKHNVIDRDK-ILV 297 Query: 284 WFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQ-----LEKQKLKETTDPAKDPGFKEL 337 DSW KI +E + + +E+ Q ++ A+D Sbjct: 298 PPNWDSWGKIRIIREGFDMEGVSTAWSIEIQDAPEPLTGAVDQPQDDSAMGAEDG----- 352 Query: 338 VIDEIRSQKNEELAGLMRDVLL 359 + + + R+ + Sbjct: 353 --TSAVTIFEQTITDPKRNTAM 372 >gi|24641230|ref|NP_727503.1| Dlic2 CG1938-PB, isoform B [Drosophila melanogaster] gi|22832093|gb|AAN09291.1| CG1938-PB, isoform B [Drosophila melanogaster] Length = 398 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 81/287 (28%), Gaps = 38/287 (13%) Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + VW L LL + VIL + ++QP + L K L Sbjct: 2 TRLGVWVLDGDPGHTNLLHYALNETNYAHTLVILTVSMTQPWGWLEQLNHWIKVLGQHID 61 Query: 166 QMMEKV-TPELREILEQRTVERVGQQNKDSEK--------------------------LD 198 + E T + + D + + Sbjct: 62 SLQLDAKEKEAARQRLTTTWQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLLPLTEDALIT 121 Query: 199 PLPFPVIIVGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 L +++V K D + + + +R+ G +L + S K K Sbjct: 122 NLGLDIVVVVTKTDYMTTLEKEYEYRDEHFDFIQQWIRNFCLRHGTSLFYTSVKEDKNCD 181 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV 312 VL + H +G P +V + + I G DS KI ++ Sbjct: 182 VLYKYLTHRIYGLPFRT--PALVVEKDAVLIPAGWDSLKKISILYENMHGVKAENPYTDI 239 Query: 313 PQLQLEKQKL--KETTDPAKDPGFKELVIDEIRSQKNEEL-AGLMRD 356 + ++ + +E +D EI Q ++ +R Sbjct: 240 IKSPPTRKAVSNREAEVQTEDEQAFLARQQEILKQGDQVRGESPLRS 286 >gi|119584835|gb|EAW64431.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_a [Homo sapiens] Length = 446 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 83/324 (25%), Gaps = 64/324 (19%) Query: 28 ATPSIQDIAG-RLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATR 86 Q++ L+E R R P + +L+LG GKT+ I + E + Sbjct: 41 DDEDGQNLWSCILSEVSTRSRS----KLPAGKNVLLLGEDGAGKTSLI-RKIQGIEEYKK 95 Query: 87 PTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQP 146 LEY + + + E Sbjct: 96 GR-GLEYLYLNVHDEDRDVIR------DFQEYVEP-------GEDFPAS----------- 130 Query: 147 QRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVII 206 ++ + V L PV++ Sbjct: 131 -------------------------PQRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLV 165 Query: 207 VGGKYDVFSGFDP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICH 260 V K D S + +R G AL++ S K K ++ I Sbjct: 166 VCTKCDAISVLEKEHDYRDEHFDFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQ 225 Query: 261 LGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQ 320 +G VV + + I G D+ KIG ++ ++ Sbjct: 226 KLYG--FPYKIPAVVVEKDAVFIPAGWDNDKKIGILHENFQTLKAEDNFEDIITKPPVRK 283 Query: 321 KLKETTDPAKDPGFKELVIDEIRS 344 + E A+D + + + + Sbjct: 284 FVHEKEIMAEDDQVFLMKLQSLLA 307 >gi|83772684|dbj|BAE62812.1| unnamed protein product [Aspergillus oryzae] Length = 523 Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 63/396 (15%), Positives = 123/396 (31%), Gaps = 55/396 (13%) Query: 13 RLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG-------- 64 + G ++ PS +D + P E+ +L+LG Sbjct: 3 TSSHNPGPKLGSGNNSRPSSKDGPKKNIWSSMLDSVANGKRLP-EKNLLILGGTPESQRE 61 Query: 65 -----SKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNV--WELGSL- 116 S + N AL Y++ + + + + V + L Sbjct: 62 FLDTLSADTSDPSLSNDRRKGRLPPVANQFALGYTYQDVLDADQEDTLARVSAYLLSEPS 121 Query: 117 DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR-------DTAQQMME 169 + LL+ + + + V+++LD S P + L + LR D + +ME Sbjct: 122 LSFAPLLKPLLTAQSVPETLVVILLDWSDPWTWVRRLREWVRLLRHVLISLDDETKIVME 181 Query: 170 KVTPELREILE------QRTVERVGQQNKDSEKLDP------LPFPVIIVGGKYDVFSGF 217 + E R+ + L P L P+ +V D Sbjct: 182 ETMTEWRDRKRGMDPSSTGAQGLTSSGGPVTIPLGPGEWDEGLGIPMCVVCQGADKIEKL 241 Query: 218 DPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAK-VLRDTICHLGFGS--PAH 268 + + +R++ G +L++ P L + LG S Sbjct: 242 EKDHGWHEEEFDFILQFMRTILLKHGASLIYT---TPFLVNSLQSLLHSSLGIHSLLKRQ 298 Query: 269 PFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTD 327 + +V+D ++ + + DSW KI +E + + +E+ Q E + D Sbjct: 299 SLKHNVIDRDK-ILVPSNWDSWGKIRIIREGFDMEGVSTAWSIEI-QDPPEP-LSGSSMD 355 Query: 328 PAKDPGFKELVID---EIRSQKNEELAGLMRDVLLR 360 AK G +D + + + RD + Sbjct: 356 DAKPQGENAAGLDDGTSAVAIFEQTIKDPKRDASMT 391 >gi|109081641|ref|XP_001103732.1| PREDICTED: similar to RAB11a, member RAS oncogene family [Macaca mulatta] Length = 304 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 83/288 (28%), Gaps = 57/288 (19%) Query: 14 LQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTA 73 ++ G T A L+ + + + ++++G VGK+ Sbjct: 62 VRVTPAATPPGPTDTTA-----APALSLLGRAMGTRDD-EYDYLFKVVLIGDSGVGKSNL 115 Query: 74 INKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGL 132 +++F + ++ T+ +E++ G +W+ + + R Sbjct: 116 LSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIWDTAGQERYRAITSAYYR---- 170 Query: 133 QQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK 192 + +L+ D+++ + ++E K LRD A Sbjct: 171 GAVGALLVYDIAKHLT-YENVERWLKELRDHAD--------------------------- 202 Query: 193 DSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 +++VG K D+ +R R+ A G + + S + Sbjct: 203 -------SNIVIMLVGNKSDLRH-----LRAVPTDEARAFAEKNGLSFIETSALDSTNVE 250 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQS 300 TI + + + D E + I Sbjct: 251 AAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--NVVPIHVPPTTE 293 >gi|109105440|ref|XP_001118047.1| PREDICTED: similar to RAB1B, member RAS oncogene family [Macaca mulatta] Length = 271 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 32/272 (11%), Positives = 76/272 (27%), Gaps = 56/272 (20%) Query: 2 RLPLIFHSLHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLR----------QLEA 51 R L + + KRT + A + E + Sbjct: 13 RGTLDKLQVPRTSAARPEKRTFAPARRGRGLWGGAATILEREAEQSRLGATERAAAAAMN 72 Query: 52 TTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNV 110 +L++G VGK+ + +F D + T+ +++ G + + Sbjct: 73 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKLQI 131 Query: 111 WELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEK 170 W+ + + R +I++ D++ + + +++ + + A + + K Sbjct: 132 WDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQES-YANVKQWLQEIDRYASENVNK 186 Query: 171 VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLR 230 + +VG K D+ + + + Sbjct: 187 L----------------------------------LVGNKSDLTT-----KKVVDNTTAK 207 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 A +G L S K + T+ Sbjct: 208 EFADSLGIPFLETSAKNATNVEQAFMTMAAEI 239 >gi|114675154|ref|XP_001147785.1| PREDICTED: similar to GTP-binding protein RAB11B [Pan troglodytes] Length = 348 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 76/265 (28%), Gaps = 51/265 (19%) Query: 43 QQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGS 101 R ++++G VGK+ +++F + ++ T+ +E++ Sbjct: 127 SARTMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 186 Query: 102 GKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR 161 G +W+ + + R + +L+ D+++ + ++E K LR Sbjct: 187 G-KTIKAQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELR 240 Query: 162 DTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPII 221 D A +++VG K D+ + Sbjct: 241 DHAD----------------------------------SNIVIMLVGNKSDLRH-----L 261 Query: 222 RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPL 281 R R+ A + + S + I + + + +E Sbjct: 262 RAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES- 320 Query: 282 CIWFGTDSWSKIGDTGAQSVERIGA 306 G ++ I ++ Sbjct: 321 ---PG-NNVVDISVPPTTDGQKPNK 341 >gi|91076508|ref|XP_973251.1| PREDICTED: similar to CG5771-PB, isoform B [Tribolium castaneum] Length = 215 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 33/279 (11%), Positives = 79/279 (28%), Gaps = 68/279 (24%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSP 105 + ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 1 MSSKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 +W+ + + R + +L+ D+++ + ++E + LRD A Sbjct: 60 IKAQIWDTAGQERYRAITAAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHAD 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 Q +++VG K D+ +R Sbjct: 115 Q----------------------------------NIVIMLVGNKSDLRH-----LRAVL 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 ++ A G + + S + I + + Sbjct: 136 TEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQ----------------- 178 Query: 286 GTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 +I D V R ++V K+ Sbjct: 179 -----KQIRDPPEGDVIRPHNVEPIDVKPTMNTDGVRKQ 212 >gi|73969479|ref|XP_864089.1| PREDICTED: similar to dynein 2 light intermediate chain isoform 1 isoform 3 [Canis familiaris] Length = 225 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 15/222 (6%) Query: 153 LECAYKGLRDTAQQMMEKVTP---ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGG 209 +E + + +M+ K+ + + Q+ + + + D E +DP P++I+G Sbjct: 1 MENLLQATKSHVDKMIMKLGKTNSKAVSEMRQKIWSNMQKDHPDRELVDPFLIPLVIIGS 60 Query: 210 KYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 KYD+F FD RK C+ LR +AH G +L+F S+ L K +R I L FG Sbjct: 61 KYDIFQDFDSEKRKVICKTLRFVAHYYGASLMFTSKSEALLLK-VRGVINQLAFGIDKS- 118 Query: 270 FRSHVVDFNEPLCIWFGTDSWSKIGDT--GAQSVERIGATFGMEVPQLQLEK-------Q 320 +S VD N+PL I G DS S+IG + ++ A M++ + E+ Sbjct: 119 -KSICVDQNKPLFITAGLDSLSQIGSPPIPDNDIGKLHAHSPMDLWKKVYERVFPPKSTN 177 Query: 321 KLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLRGK 362 LK DPA+DP + E +DE+R QK++EL R K Sbjct: 178 TLKHIKDPARDPQYAEGEVDEMRIQKDQELEQYKRSSSKSWK 219 >gi|5902803|sp|P28188|ARA5_ARATH Ras-related protein ARA-5 gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana] Length = 258 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 29/270 (10%), Positives = 74/270 (27%), Gaps = 52/270 (19%) Query: 11 HQRLQKMFVKRTE----GGESATPSIQDIAGRLAEEQQRLRQL-EATTTPKERTILVLGS 65 + + + + +D+ +A R +L++G Sbjct: 12 AHIIIQGPNTESPPLVNRERKSEKRERDLWLCIARCSSSHRSKTMNPEYDYLFKLLLIGD 71 Query: 66 KCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLE 124 VGK+ + +F D + T+ +++ + +W+ + + Sbjct: 72 SGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVE-QDGKTIKLQIWDTAGQERFRTITS 130 Query: 125 VPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTV 184 R +I++ D++ + F +++ + A + K+ Sbjct: 131 SYYR----GAHGIIIVYDVTDEESF-NNVKQWLSEIDRYASDNVNKL------------- 172 Query: 185 ERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYS 244 +VG K D+ R ++ A IG + S Sbjct: 173 ---------------------LVGNKSDL-----TENRAIPYETAKAFADEIGIPFMETS 206 Query: 245 QKMPKLAKVLRDTICHLGF-GSPAHPFRSH 273 K + + + P ++ Sbjct: 207 AKDATNVEQAFMAMSASIKERMASQPAGNN 236 >gi|74026344|ref|XP_829738.1| dynein light intermediate chain [Trypanosoma brucei TREU927] gi|70835124|gb|EAN80626.1| dynein light intermediate chain, putative [Trypanosoma brucei] Length = 418 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 83/362 (22%), Positives = 137/362 (37%), Gaps = 42/362 (11%) Query: 33 QDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFD----------REE 82 +D+ +A L E E + V+G GKT+ I + + + Sbjct: 64 KDLWQNIA-----LNTKENNLPQSEANLFVVGCSGAGKTSVIQRVCSAIGAGGNTSGKGK 118 Query: 83 HATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLD 142 +PT AL+Y + R Q ++ WEL QL EV + + + + +++D Sbjct: 119 TKVKPTTALDYQYTTRSDRH-VSQTVHFWELAQGMELSQLCEVVITPENVHLMHIAIVVD 177 Query: 143 LSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE---LREILEQRTVERVGQQNKDSEKLDP 199 S P W L K + A ++++K+ + + L R +G+ + D +++ Sbjct: 178 FSDPSSMWDTLAYWLKRVDRRANEILQKMRAKGSNTPDKLHARAQRALGEGHPDLKRVRL 237 Query: 200 LPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIC 259 P +IV K D F G K RCLR +AHL G L+F S LR + Sbjct: 238 SGLPTVIVCNKVDAFPGPM-EQMKTLTRCLRFIAHLYGAYLVFSSDADS---AKLRLLLN 293 Query: 260 HLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTG---------------AQSVERI 304 HL F +P + + + I D++ IGD ++R Sbjct: 294 HLLFLTPFDARQVELDVERGTILIMPENDTFVDIGDPPLCDGPSGGPVTQSTGDSELDRW 353 Query: 305 GATFGMEVPQL----QLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVLLR 360 P + + + + + GF E ID IR QK+EEL + R Sbjct: 354 KVPLDAMFPPKAGGGRAQSDAMLKRLYDMGEGGFGEPTIDTIRRQKDEELEQYRKSAARR 413 Query: 361 GK 362 K Sbjct: 414 DK 415 >gi|66513627|ref|XP_623997.1| PREDICTED: similar to Rab-protein 11 CG5771-PB, isoform B [Apis mellifera] Length = 215 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 78/275 (28%), Gaps = 68/275 (24%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 ++ A G + + S + I + + Sbjct: 140 KAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ--------------------- 178 Query: 290 WSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 +I D R ++V + K+ Sbjct: 179 -KQIRDPPEGDTIRPQNVEPIDVKPTMNSEGMRKQ 212 >gi|86563861|ref|NP_506683.2| X-BoX promoter element regulated family member (xbx-1) [Caenorhabditis elegans] gi|77799271|emb|CAB01645.2| Hypothetical protein F02D8.3 [Caenorhabditis elegans] Length = 370 Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 93/355 (26%), Positives = 164/355 (46%), Gaps = 34/355 (9%) Query: 31 SIQDIAG--------RLAEEQQRLRQLEATTTP---------KERTILVLGSKCVGKTTA 73 +I D+A R AE +Q+L T + E I+ G++ GK++ Sbjct: 2 NIWDLAKQKLVENKQRAAELKQKLDDENGTQSDNYLSEVRRRHESHIIFAGNRKSGKSSF 61 Query: 74 INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQ 133 + F +R + + ++ LEY++ RR G + N+WELG +LL VP+ ++ Sbjct: 62 MLNFLER-KEDLKDSVGLEYTYARRT-RGNVKDIANLWELGGGATVTELLSVPITMKNVE 119 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 ++IL+LD++ W +E +R + + + L+ L ++ R+ + + Sbjct: 120 ICSLILLLDMTNLDEMWITIEKTVDSVRRLVENLERQ-DINLQTRLAEKMRLRLEKYDDG 178 Query: 194 SEKL-DPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 S K+ +P P PV IV KYD F F+ R+H C+ LR +A+ G L+ +S +M + K Sbjct: 179 SLKMCNPCPIPVTIVASKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMFSSRMEQFPK 238 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV 312 ++++ H FG+ + ++ D N+P+ + G DS IG A +GA+ + Sbjct: 239 LVKNMTSHFAFGTVCP--QGYMTDHNKPMFVKCGFDSLESIGIPPASD-NFMGASSPFNL 295 Query: 313 PQLQ-----LEKQKLKE-----TTDPAKDPGFKELVIDEIRSQKNEELAGLMRDV 357 + +K + DP DP FKE ID + K +EL +R Sbjct: 296 WRESFISLWPQKTGTIDIEDTKKQDPMIDPVFKEPNIDNLVEIKRKELKNHIRSK 350 >gi|156551916|ref|XP_001607057.1| PREDICTED: similar to putative rab11 [Nasonia vitripennis] Length = 215 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 78/275 (28%), Gaps = 68/275 (24%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 ++ A G + + S + I + + Sbjct: 140 KTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ--------------------- 178 Query: 290 WSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 +I D R ++V + K+ Sbjct: 179 -KQIRDPPEGDTIRPQNVEPIDVKPTMSSEGMRKQ 212 >gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis] gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis] Length = 218 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 81/270 (30%), Gaps = 61/270 (22%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 ++ A G + + S +V I + + DS Sbjct: 140 KAFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQIH---------------DS 184 Query: 290 WSKIGDTGAQSVERIGATFGMEVPQLQLEK 319 S G + +V+ I + + + + Sbjct: 185 PSSDGSHPSNNVQTIHVAPTTDDDRKKRVQ 214 >gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens] Length = 218 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 75/257 (29%), Gaps = 51/257 (19%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDES----PG-NN 194 Query: 290 WSKIGDTGAQSVERIGA 306 I ++ Sbjct: 195 VVDISVPPTTDGQKPNK 211 >gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct] Length = 219 Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 30/251 (11%), Positives = 73/251 (29%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDES----PG-NN 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVDISVPPTTD 205 >gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca coagulata] Length = 215 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 77/275 (28%), Gaps = 68/275 (24%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A G + + S + I + + Sbjct: 140 RTFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQ--------------------- 178 Query: 290 WSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 +I D R ++V K+ Sbjct: 179 -KQIRDPPEGDTIRPTNVEAIDVKPTVNTDSVRKQ 212 >gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus] Length = 216 Score = 231 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 74/251 (29%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A G + + S + TI + + H+ D E + Sbjct: 140 RAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---HMSDRRENDMSPSN--N 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVPIHVPPTTE 205 >gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic construct] gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct] gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct] gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct] gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct] gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct] Length = 217 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 73/251 (29%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A G + + S + TI + + + D E + Sbjct: 140 RAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--N 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVPIHVPPTTE 205 >gi|94733946|emb|CAK04343.1| novel protein (zgc:55760) [Danio rerio] Length = 218 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 30/251 (11%), Positives = 71/251 (28%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + +VD + Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK---QMVDRPGHDESPGN--N 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVDISVPPTTD 205 >gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos] Length = 216 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 32/250 (12%), Positives = 73/250 (29%), Gaps = 51/250 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A G + + S + TI + + + D E + Sbjct: 140 RAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--N 194 Query: 290 WSKIGDTGAQ 299 I Sbjct: 195 VVPIHVPPTT 204 >gi|57524801|ref|NP_001005827.1| Ras-related protein Rab-11A [Gallus gallus] gi|82233797|sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A gi|53133464|emb|CAG32061.1| hypothetical protein [Gallus gallus] Length = 216 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 73/251 (29%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A G + + S + TI + + + D E + Sbjct: 140 RAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--N 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVPIHVPPTTE 205 >gi|4758984|ref|NP_004654.1| Ras-related protein Rab-11A [Homo sapiens] gi|13592148|ref|NP_112414.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|31980840|ref|NP_059078.2| RAB11a, member RAS oncogene family [Mus musculus] gi|54792725|ref|NP_001003276.1| Ras-related protein Rab-11A [Canis lupus familiaris] gi|72535192|ref|NP_001026958.1| Ras-related protein Rab-11A [Sus scrofa] gi|126722661|ref|NP_001075720.1| tubulovesicle-associated protein [Oryctolagus cuniculus] gi|73999640|ref|XP_855589.1| PREDICTED: rab11 GTP-binding protein [Canis familiaris] gi|114657631|ref|XP_510490.2| PREDICTED: similar to rab11 [Pan troglodytes] gi|126277069|ref|XP_001367185.1| PREDICTED: similar to rab11 [Monodelphis domestica] gi|50402540|sp|P62494|RB11A_RAT Ras-related protein Rab-11A (Rab-11) (24KG) gi|50402541|sp|P62490|RB11A_CANFA Ras-related protein Rab-11A (Rab-11) gi|50402542|sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A (Rab-11) (YL8) gi|50402543|sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A (Rab-11) gi|50402544|sp|P62493|RB11A_RABIT Ras-related protein Rab-11A (Rab-11) gi|75056558|sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A gi|75070685|sp|Q5R9M7|RB11A_PONPY Ras-related protein Rab-11A gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens] gi|917|emb|CAA39799.1| rab11 [Canis familiaris] gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens] gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein gi|310067|gb|AAA31491.1| tubulovesicle-associated protein gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens] gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens] gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus] gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus] gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens] gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens] gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens] gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens] gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens] gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo pygmaeus] gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct] gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct] gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa] gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus] gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus] gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus] gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus] gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct] gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct] gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus] gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus] gi|1089909|prf||2018147A GTP-binding protein rab11 Length = 216 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 73/251 (29%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A G + + S + TI + + + D E + Sbjct: 140 RAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--N 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVPIHVPPTTE 205 >gi|6679583|ref|NP_033023.1| RAB11B, member RAS oncogene family [Mus musculus] gi|1172815|sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B gi|433064|gb|AAC42093.1| Rab11b gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus] gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus] gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus] gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus] gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus] gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus] gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus] gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus] gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus] gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus] gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus] gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus] Length = 218 Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats. Identities = 31/257 (12%), Positives = 75/257 (29%), Gaps = 51/257 (19%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PG-NN 194 Query: 290 WSKIGDTGAQSVERIGA 306 I +R Sbjct: 195 VVDISVPPTTDGQRPNK 211 >gi|114638536|ref|XP_001150399.1| PREDICTED: similar to RAB1B, member RAS oncogene family [Pan troglodytes] Length = 255 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 30/263 (11%), Positives = 74/263 (28%), Gaps = 56/263 (21%) Query: 11 HQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLR----------QLEATTTPKERTI 60 + KRT + A + E + + + Sbjct: 6 PRISAARPEKRTFAPARRGRGLWGGAATILEREAEQSRLGATERAAAAAMNSEYDYLFKL 65 Query: 61 LVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNA 119 L++G VGK+ + +F D + T+ +++ G + +W+ + Sbjct: 66 LLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKLQIWDTAGQERF 124 Query: 120 EQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL 179 + R +I++ D++ + + +++ + + A + + K+ Sbjct: 125 RTITSSYYR----GAHGIIVVYDVTDQES-YANVKQWLQEIDRYASENVNKL-------- 171 Query: 180 EQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGA 239 +VG K D+ + + + A +G Sbjct: 172 --------------------------LVGNKSDLTT-----KKVVDNTTAKEFADSLGIP 200 Query: 240 LLFYSQKMPKLAKVLRDTICHLG 262 L S K + T+ Sbjct: 201 FLETSAKNATNVEQAFMTMAAEI 223 >gi|85109909|ref|XP_963146.1| GTP-BINDING PROTEIN YPT1 [Neurospora crassa OR74A] Length = 243 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 30/272 (11%), Positives = 78/272 (28%), Gaps = 49/272 (18%) Query: 16 KMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAIN 75 ++ +++PS+ + + +AT +L++G VGK+ + Sbjct: 8 RVPTASPLHP-TSSPSLSRLDRSPPPPPPKNPADDATRYDYLFKLLLIGDSGVGKSCLLL 66 Query: 76 KFFD-REEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQ 134 +F D + T+ +++ G + +W+ + + R Sbjct: 67 RFADDTYTESYISTIGVDFKIRTIELDG-KTVKLQIWDTAGQERFRTITSSYYR----GA 121 Query: 135 LAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDS 194 + ++ D++ F +++ + + A + + K+ Sbjct: 122 HGICVVYDVTDMDSF-NNVKQWLQEIDRYATEGVNKL----------------------- 157 Query: 195 EKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVL 254 +VG K D + + A +G L S K + Sbjct: 158 -----------LVGNKSD-----MTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQA 201 Query: 255 RDTICHLGFGSPAHPFRSHVVDFNEPLCIWFG 286 T+ ++ + + G Sbjct: 202 FLTMARQIKERMGSSIATNNT--KASVNVSPG 231 >gi|84000297|ref|NP_001033251.1| hypothetical protein LOC534708 [Bos taurus] gi|116255983|sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A gi|83405346|gb|AAI11144.1| Similar to RAB11a, member RAS oncogene family [Bos taurus] Length = 216 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 73/251 (29%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A G + + S + TI + + + D E + Sbjct: 140 RAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--N 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVPIHVPPTTE 205 >gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens] Length = 218 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 75/257 (29%), Gaps = 51/257 (19%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PG-NN 194 Query: 290 WSKIGDTGAQSVERIGA 306 I ++ Sbjct: 195 VVDISVPPTTDGQKPNK 211 >gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis] Length = 218 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 31/254 (12%), Positives = 75/254 (29%), Gaps = 51/254 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHDES----PG-NN 194 Query: 290 WSKIGDTGAQSVER 303 I +R Sbjct: 195 VVDISVPPTTDSQR 208 >gi|14249144|ref|NP_116006.1| RAB11B, member RAS oncogene family [Rattus norvegicus] gi|78369332|ref|NP_001030468.1| RAB11A, member RAS oncogene family [Bos taurus] gi|109123235|ref|XP_001093925.1| PREDICTED: RAB11B, member RAS oncogene family [Macaca mulatta] gi|38258938|sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B (GTP-binding protein YPT3) gi|50403673|sp|O35509|RB11B_RAT Ras-related protein Rab-11B gi|108860922|sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus] gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens] gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus] gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct] gi|75773827|gb|AAI05163.1| RAB11A, member RAS oncogene family [Bos taurus] gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis] gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens] gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus] Length = 218 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 75/257 (29%), Gaps = 51/257 (19%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PG-NN 194 Query: 290 WSKIGDTGAQSVERIGA 306 I ++ Sbjct: 195 VVDISVPPTTDGQKPNK 211 >gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus] Length = 218 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 31/257 (12%), Positives = 75/257 (29%), Gaps = 51/257 (19%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PG-NN 194 Query: 290 WSKIGDTGAQSVERIGA 306 I +R Sbjct: 195 VVDISVPPTTDGQRPNK 211 >gi|110748807|ref|XP_001121791.1| PREDICTED: similar to dynein 2 light intermediate chain [Apis mellifera] Length = 345 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 100/344 (29%), Positives = 186/344 (54%), Gaps = 22/344 (6%) Query: 24 GGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFFDREEH 83 +++ +++DIA R E+++ R+ T ER+I+++GSK VGKTT +++F ++ + Sbjct: 2 ADQNSEENVRDIALRFCLEEEQRRKTNPNET-HERSIIIVGSKRVGKTTIVHRFLEK-DE 59 Query: 84 ATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGL----QQLAVIL 139 A +PT+A++YSFGR+ G +++VWE+G L + L+ M L + +++ Sbjct: 60 APKPTIAMDYSFGRKAGKSLIKNIVHVWEVGHLTS--SLVSAAMTGSSLTHSPHHVTILV 117 Query: 140 MLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDP 199 +LDLSQP+ WT E A +R+ + + + + + +++ ++ +DP Sbjct: 118 ILDLSQPEILWTTFEEALSVVRNAMKMSYDDKIIQELKKQRIKERKKIVEKE-----IDP 172 Query: 200 LPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTIC 259 P + +GGKYD F D ++ + LR++AH++G +L ++S K L + ++D + Sbjct: 173 FPMRLCFIGGKYDQFKDLDLDKQELVGKTLRAVAHILGASLYYHSAKDKSLLRRIKDLLS 232 Query: 260 HLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDT-----GAQSVERIGATFGMEVPQ 314 + GFG+ + DF +PL I GTDS+S I + ++ I + +PQ Sbjct: 233 YYGFGTQFSDIK--CTDFEKPLAISAGTDSFSSIDLQFPQTRPSAMLDTIKQIYVTHIPQ 290 Query: 315 LQLEKQKLKETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 + + DP+ DP F E +ID +R+Q+ EE+ L+ D+L Sbjct: 291 ESRSNEII--LEDPSNDPNFNEPIIDRLRTQREEEINILLHDML 332 >gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus] Length = 218 Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 75/257 (29%), Gaps = 51/257 (19%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PG-NN 194 Query: 290 WSKIGDTGAQSVERIGA 306 I ++ Sbjct: 195 VVDISVPPTTDGQKPNK 211 >gi|47550807|ref|NP_999935.1| hypothetical protein LOC406798 [Danio rerio] gi|29294722|gb|AAH48889.1| Zgc:55760 [Danio rerio] Length = 218 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 30/251 (11%), Positives = 71/251 (28%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + +VD + Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK---QMVDRPGHDESPGN--N 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVDISVPPTTD 205 >gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|148237448|ref|NP_001087959.1| hypothetical protein LOC494642 [Xenopus laevis] gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis] gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus tropicalis] Length = 218 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 30/255 (11%), Positives = 73/255 (28%), Gaps = 51/255 (20%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSP 105 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 1 MGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 60 IKAQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 +++VG K D+ +R Sbjct: 115 N----------------------------------NIVIMLVGNKSDLRH-----LRAVP 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 R+ A + + S + I + + + +E Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDES----P 191 Query: 286 GTDSWSKIGDTGAQS 300 G ++ I Sbjct: 192 G-NNVVDISVPPTTD 205 >gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] gi|148234494|ref|NP_001087765.1| MGC84419 protein [Xenopus laevis] gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis] gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus tropicalis] Length = 216 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 73/251 (29%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------KIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A G + + S + TI + + + D E + Sbjct: 140 RAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQT---QMSDRRENDMSPSN--N 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVPIHVPPTTE 205 >gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens] Length = 218 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 75/257 (29%), Gaps = 51/257 (19%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SDIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PG-NN 194 Query: 290 WSKIGDTGAQSVERIGA 306 I ++ Sbjct: 195 VVDISVPPTTDGQKPNK 211 >gi|60302752|ref|NP_001012569.1| RAB11B, member RAS oncogene family [Gallus gallus] gi|126323801|ref|XP_001376337.1| PREDICTED: hypothetical protein [Monodelphis domestica] gi|60098771|emb|CAH65216.1| hypothetical protein [Gallus gallus] Length = 218 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 30/251 (11%), Positives = 73/251 (29%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDES----PG-NN 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVDISVPPTTD 205 >gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var. neoformans B-3501A] gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var. neoformans B-3501A] Length = 213 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 30/249 (12%), Positives = 75/249 (30%), Gaps = 51/249 (20%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQV 107 + + ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 2 TDGSNYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDG-KTVK 60 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 +W+ + + R + +L+ D+++ Q + ++ K LRD A Sbjct: 61 AQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHQT-YENVTRWLKELRDHADA- 114 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 +++VG K D+ +R + Sbjct: 115 ---------------------------------NIVIMLVGNKSDL-----KHLRAVSTD 136 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP-----LC 282 + A G + + S + I + + D +P + Sbjct: 137 EAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIKPSGGETIL 196 Query: 283 IWFGTDSWS 291 + D Sbjct: 197 VAPTADDGG 205 >gi|131849|sp|P22129|RB11B_DISOM Ras-related protein Rab-11B (ORA3) gi|213121|gb|AAA49233.1| GTP-binding protein Length = 218 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 31/249 (12%), Positives = 73/249 (29%), Gaps = 51/249 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIW 65 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ + ++E K LRD A Sbjct: 66 DTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN----- 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R R+ Sbjct: 116 -----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARA 141 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 A + + S + I + + S +E G ++ Sbjct: 142 FAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRSAHDES----PG-NNVV 196 Query: 292 KIGDTGAQS 300 I Sbjct: 197 DISVPPTTD 205 >gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966] Length = 213 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 30/250 (12%), Positives = 74/250 (29%), Gaps = 51/250 (20%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQV 107 + ++++G GK+ +++F + +R T+ +E++ G Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDG-KTIK 60 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 +W+ + + R + +L+ D+++ + ++ K LRD A Sbjct: 61 AQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHSTYV-NVSRWLKELRDHAD-- 113 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 V++VG K D+ +R Sbjct: 114 --------------------------------SNIVVMLVGNKSDLRH-----LRAVPTE 136 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP-----LC 282 ++ A + + S + I + ++ D +P + Sbjct: 137 EAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSSDDVIKPSGGETIS 196 Query: 283 IWFGTDSWSK 292 + TD + Sbjct: 197 VQPSTDDGGQ 206 >gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus] Length = 217 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 77/255 (30%), Gaps = 50/255 (19%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIW 65 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ + ++E K LRD A Q Sbjct: 66 DTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADQ----- 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R R+ Sbjct: 116 -----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARA 141 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 A + + S + I + + + D N+P D+ Sbjct: 142 FAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIRNDTD-NDP---SPSGDNVK 197 Query: 292 KIGDTGAQSVERIGA 306 I S + Sbjct: 198 PISIAPTDSSDTRKK 212 >gi|4758986|ref|NP_004209.1| RAB11B, member RAS oncogene family [Homo sapiens] gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens] Length = 218 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 76/257 (29%), Gaps = 51/257 (19%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + ++ R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRRITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PG-NN 194 Query: 290 WSKIGDTGAQSVERIGA 306 I ++ Sbjct: 195 VVDISVPPTTDGQKPNK 211 >gi|50540176|ref|NP_001002555.1| hypothetical protein LOC436828 [Danio rerio] gi|125808482|ref|XP_001330902.1| PREDICTED: hypothetical protein [Danio rerio] gi|125808488|ref|XP_001336227.1| PREDICTED: hypothetical protein [Danio rerio] gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio] Length = 218 Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 30/249 (12%), Positives = 73/249 (29%), Gaps = 51/249 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 7 EYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIW 65 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ + ++E K LRD A Sbjct: 66 DTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN----- 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R R+ Sbjct: 116 -----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARA 141 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 A + + S + I + + + +E G ++ Sbjct: 142 FAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHDES----PG-NNVV 196 Query: 292 KIGDTGAQS 300 I Sbjct: 197 DISVPPTTD 205 >gi|17137216|ref|NP_477170.1| Rab-protein 11 CG5771-PB, isoform B [Drosophila melanogaster] gi|19549675|ref|NP_599137.1| Rab-protein 11 CG5771-PA, isoform A [Drosophila melanogaster] gi|125776219|ref|XP_001359206.1| GA19116-PA [Drosophila pseudoobscura] gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster] gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster] gi|7300703|gb|AAF55850.1| CG5771-PA, isoform A [Drosophila melanogaster] gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster] gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster] gi|23171847|gb|AAN13849.1| CG5771-PB, isoform B [Drosophila melanogaster] gi|54638949|gb|EAL28351.1| GA19116-PA [Drosophila pseudoobscura] Length = 214 Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 75/265 (28%), Gaps = 68/265 (25%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDG-KTIKAQIW 65 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 66 DTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ----- 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R + Sbjct: 116 -----------------------------NIVIMLVGNKSDLRH-----LRSVPTDEAKL 141 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 A G + + S + I + + Sbjct: 142 FAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ----------------------K 179 Query: 292 KIGDTGAQSVERIGATFGMEVPQLQ 316 +I D V R ++V Sbjct: 180 QIRDPPEGDVIRPSNVEPIDVKPTV 204 >gi|73987203|ref|XP_854399.1| PREDICTED: similar to RAB11B, member RAS oncogene family [Canis familiaris] Length = 410 Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 30/252 (11%), Positives = 75/252 (29%), Gaps = 51/252 (20%) Query: 56 KERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELG 114 ++++G VGK+ +++F + ++ T+ +E++ G +W+ Sbjct: 202 YLLRLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIWDTA 260 Query: 115 SLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPE 174 + + R + +L+ D+++ + ++E K LRD A Sbjct: 261 GQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD--------- 306 Query: 175 LREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAH 234 +++VG K D+ +R R+ A Sbjct: 307 -------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAFAE 336 Query: 235 LIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIG 294 + + S + I + + + +E G ++ I Sbjct: 337 KNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PG-NNVVDIS 391 Query: 295 DTGAQSVERIGA 306 ++ Sbjct: 392 VPPTTDGQKPNK 403 >gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens] Length = 218 Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats. Identities = 29/257 (11%), Positives = 75/257 (29%), Gaps = 51/257 (19%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + + + I + + + +E G ++ Sbjct: 140 RAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PG-NN 194 Query: 290 WSKIGDTGAQSVERIGA 306 I ++ Sbjct: 195 VVDISVPPTTDGQKPNK 211 >gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family [Xenopus laevis] gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis] Length = 218 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 30/255 (11%), Positives = 73/255 (28%), Gaps = 51/255 (20%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSP 105 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 1 MGARDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 60 IKAQIWDTAGQERYRAITSAYYR----GVVGALLVYDIAKHLT-YENVERWLKELRDHAD 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 +++VG K D+ +R Sbjct: 115 N----------------------------------NIVIMLVGNKSDLRH-----LRAVP 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 R+ A + + S + I + + + +E Sbjct: 136 TDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDES----P 191 Query: 286 GTDSWSKIGDTGAQS 300 G ++ I Sbjct: 192 G-NNVVDISVPPTTD 205 >gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio] Length = 218 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 30/251 (11%), Positives = 72/251 (28%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + E G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAERSAHGES----PG-NN 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVDISVPPTTD 205 >gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii] gi|3025293|sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 gi|806728|gb|AAA82729.1| YptC6 gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii] Length = 216 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 32/263 (12%), Positives = 74/263 (28%), Gaps = 52/263 (19%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKS 104 + ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 1 MSHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDG-K 59 Query: 105 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 164 +W+ + + R + +L+ D+++ F ++E K LRD A Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYR----GAVGALLVYDITKSVTF-ENVERWLKELRDHA 114 Query: 165 QQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKH 224 +++VG K D+ +R Sbjct: 115 D----------------------------------SNIVIMLVGNKSDL-----KHLRDV 135 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 ++ G + + S + I + + + + I Sbjct: 136 QTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRPK---IG 192 Query: 285 FGTDSWSKIGDTGAQSVERIGAT 307 G D I A Sbjct: 193 EGRDV---IVIDNAHDDGGKKKG 212 >gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase Length = 184 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 68/215 (31%), Gaps = 46/215 (21%) Query: 52 TTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNV 110 + ++++G VGK+ +++F + ++ T+ +E++ G + Sbjct: 15 GSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQI 73 Query: 111 WELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEK 170 W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 74 WDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD----- 123 Query: 171 VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLR 230 +++VG K D+ +R R Sbjct: 124 -----------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEAR 149 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 + A G + + S + TI + Sbjct: 150 AFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184 >gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase Length = 199 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 30/248 (12%), Positives = 74/248 (29%), Gaps = 51/248 (20%) Query: 54 TPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWE 112 ++++G VGK+ +++F + ++ T+ +E++ G +W+ Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIWD 60 Query: 113 LGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVT 172 + ++ R + +L+ D+++ + ++E K LRD A Sbjct: 61 TAGQERYRRITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------- 108 Query: 173 PELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSM 232 +++VG K D+ +R R+ Sbjct: 109 ---------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAF 136 Query: 233 AHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSK 292 A + + S + I + + + +E G ++ Sbjct: 137 AEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PG-NNVVD 191 Query: 293 IGDTGAQS 300 I Sbjct: 192 ISVPPTTD 199 >gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST] gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST] Length = 201 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 72/246 (29%), Gaps = 48/246 (19%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVM 108 + +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTI-DLDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D + F +++ + + A + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDCTDHDSF-ENVKQWLEEIERYACDNV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ ++ Sbjct: 115 NKL----------------------------------LVGNKCDL-----QTKKRVDTTT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 +A+ +G L S K + T+ P + D + I G + Sbjct: 136 AMELANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAA--DPPSAVKIDKGRN 193 Query: 289 SWSKIG 294 +K G Sbjct: 194 VEAKSG 199 >gi|156547707|ref|XP_001605037.1| PREDICTED: similar to ENSANGP00000012631 [Nasonia vitripennis] Length = 357 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 102/347 (29%), Positives = 172/347 (49%), Gaps = 27/347 (7%) Query: 31 SIQDIAGRLAEEQQRLRQ---LEATTTPKERTILVLGSKCVGKTTAINKFFDREEHATRP 87 + QD A LA + E+++++LGS+ VGKTT I +F ++E+ +P Sbjct: 6 TNQDNARELALQASIQEDTQRKTDPEESHEKSLIILGSREVGKTTMIYRFLEKEDTP-KP 64 Query: 88 TLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRT----HGLQQLAVILMLDL 143 TLA++YS+GR+ G V++VWE+G L L+ MR H V++MLDL Sbjct: 65 TLAMDYSYGRKAGKSLVKDVVHVWEVGHLA--PSLISGSMRGCTLSHSAHHTTVLIMLDL 122 Query: 144 SQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE-----KLD 198 +P W LE +R MM EL L +R + + ++ K D Sbjct: 123 GKPDVLWNSLEECLVAVR---AAMMMSYQQELVHDLRERKIRYLRERAKPGTEDEPPVDD 179 Query: 199 PLPFPVIIVGGKYDVFSGFDP-IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDT 257 P P + ++GGKYD F ++ + LR+ AH++G L ++S K L + ++ Sbjct: 180 PFPMRLCLIGGKYDEFRELHSGDDKESIGQALRAAAHVLGAGLHYHSAKDSHLLRRTKEL 239 Query: 258 ICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGD-----TGAQSVERIGATFGMEV 312 + H +G ++ V D+++PL + G+DS+S I A +++ I + Sbjct: 240 LSH--YGFKGQSTKASVTDYDKPLSVAAGSDSFSAIDLKISRNDYAVTLDEIKQIYVRRF 297 Query: 313 PQLQLEKQKLK-ETTDPAKDPGFKELVIDEIRSQKNEELAGLMRDVL 358 PQ+ + L + DPA DP F E ++D +R Q+ +E++ L+RD+L Sbjct: 298 PQVPKNQDVLPGDMDDPANDPNFNEPIVDRLRLQREQEISVLLRDML 344 >gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp Length = 191 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 67/212 (31%), Gaps = 46/212 (21%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 25 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIW 83 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ + ++E K LRD A Sbjct: 84 DTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------ 132 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R R+ Sbjct: 133 ----------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARA 159 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 A G + + S + TI + Sbjct: 160 FAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191 >gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis] Length = 217 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 32/254 (12%), Positives = 74/254 (29%), Gaps = 51/254 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + S E G ++ Sbjct: 140 RAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRSGHEES----PG-NN 194 Query: 290 WSKIGDTGAQSVER 303 I +R Sbjct: 195 VVDISLPPTTDSQR 208 >gi|55925277|ref|NP_001007360.1| RAB11a, member RAS oncogene family [Danio rerio] gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio] gi|94733840|emb|CAK10790.1| novel protein (zgc:103679) [Danio rerio] gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio] Length = 215 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 77/256 (30%), Gaps = 51/256 (19%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTVKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A G + L S + TI + + + D + + Sbjct: 140 RAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQK---QMSDRRDNDMSPSN--N 194 Query: 290 WSKIGDTGAQSVERIG 305 I ++ ++ Sbjct: 195 VVSIQVQPTENKPKMQ 210 >gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster] Length = 214 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 74/265 (27%), Gaps = 68/265 (25%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + + T+ +E++ G +W Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDG-KTIKAQIW 65 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 66 DTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ----- 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R + Sbjct: 116 -----------------------------NIVIMLVGNKSDLRH-----LRSVPTDEAKL 141 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 A G + + S + I + + Sbjct: 142 FAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ----------------------K 179 Query: 292 KIGDTGAQSVERIGATFGMEVPQLQ 316 +I D V R ++V Sbjct: 180 QIRDPPEGDVIRPSNVEPIDVKPTV 204 >gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries] Length = 208 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 31/247 (12%), Positives = 70/247 (28%), Gaps = 51/247 (20%) Query: 55 PKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWEL 113 ++++G VGK+ +++F + ++ T+ +E++ G +W+ Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIWDT 59 Query: 114 GSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTP 173 + + R + +L+ D+++ + ++E K LRD A Sbjct: 60 AGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD-------- 106 Query: 174 ELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMA 233 +++VG K D+ R R+ A Sbjct: 107 --------------------------SNIVIMLVGNKSDLRHF-----RAVPTDEARAFA 135 Query: 234 HLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKI 293 G + + + TI + + D E + I Sbjct: 136 EKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQK---QMSDRRENDMFPSN--NVVPI 190 Query: 294 GDTGAQS 300 Sbjct: 191 HVPPTTE 197 >gi|119183788|ref|XP_001242885.1| hypothetical protein CIMG_06781 [Coccidioides immitis RS] gi|90301671|gb|EAS31302.1| hypothetical protein CIMG_06781 [Coccidioides immitis RS] Length = 531 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 55/383 (14%), Positives = 127/383 (33%), Gaps = 54/383 (14%) Query: 20 KRTEGGES---ATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG------------ 64 ++ G ++ + P+ +D + P E+T+LVLG Sbjct: 12 SQSSGTKNGPGSRPTSKDG-KKNLWSSMLDGVASGKRLP-EKTLLVLGGTPESQREFLDT 69 Query: 65 -SKCVGKTTAINKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMN--VWELGSL-DNAE 120 S ++ + AL Y++ + + + + ++ L Sbjct: 70 LSSDPSDPRLPSEKKKGKAPPIANQFALGYTYRDVLDADQEDILSRVSIYLLSEPSPAFA 129 Query: 121 QLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILE 180 LL+ + +++ ++++LD P + L + LR + + + EI+ Sbjct: 130 PLLKPLLNPKSVRETLIVILLDWESPWLWVRQLREWIRLLRSVLFSLDDDTKLVMEEIMM 189 Query: 181 QRTVERVGQQN--------KDSEKLDP------LPFPVIIVGGKYDVFSGFDPII----- 221 + +R G + S L P L P+ +V + + Sbjct: 190 EWKGQRRGTDSTYPAGSSAPVSIPLGPGEWDEGLGIPMCVVCQGAEKIEKLEKDHGWREE 249 Query: 222 -RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS--PAHPFRSHVVDFN 278 + +R++ G +L++ + + + L LG S F+ +V+D + Sbjct: 250 EFDFILQFMRTILLKHGSSLIYTTPFLANSLQSL--IHSSLGIHSLLKRQSFKHNVIDRD 307 Query: 279 EPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKLKETTDPAKDPGFKEL 337 + + + DSW KI +E +G + +E+ + + E +D Sbjct: 308 K-ILVPSNWDSWGKIRIIREGFDMEGVGTAWSIEIQESAGSGDEPAEREPNPEDG----- 361 Query: 338 VIDEIRSQKNEELAGLMRDVLLR 360 + + + RD + Sbjct: 362 --TSAVAIYEQTIQDPKRDTAIS 382 >gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti] gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti] gi|108874607|gb|EAT38832.1| rab11 [Aedes aegypti] Length = 215 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 74/270 (27%), Gaps = 71/270 (26%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 + A G + + S + I + + Sbjct: 140 KGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ--------------------- 178 Query: 290 WSKIGDTGAQSVERIGATFGMEVPQLQLEK 319 +I D SV R + Sbjct: 179 -KQIRDPPEGSVIR---PNLENIDVKPTNP 204 >gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa] Length = 215 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 74/240 (30%), Gaps = 52/240 (21%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G++ Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT-VKAQ 64 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R L +L+ D+++P F ++ K LRD A Sbjct: 65 IWDTAGQERYRAITSAYYR----GALGALLVYDVTKPTTF-ENVSRWLKELRDHAD---- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 ++++G K D+ +R Sbjct: 116 ------------------------------SNIVIMLIGNKTDL-----KHLRAVATEDA 140 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFR------SHVVDFNEPLCI 283 +S A G A + S + TI + + + + + + Sbjct: 141 QSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKKSLSSEESAPASIKDGKTIVV 200 >gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans] Length = 215 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 78/275 (28%), Gaps = 68/275 (24%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ + G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLRELRDHADQ--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 ++ A + + S + I + S Sbjct: 140 KNFAERNALSFIETSALDSTNVETAFQNILTEIYRIV----------------------S 177 Query: 290 WSKIGDTGAQSVERIGATFGMEVPQLQLEKQKLKE 324 +I D R ++V + K+ Sbjct: 178 XKQIRDPPEGETIRPQNVEAIDVKPTVNTESVRKQ 212 >gi|3024528|sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris] Length = 214 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 71/223 (31%), Gaps = 46/223 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 I+++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-KTVKAQIW 66 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ Q F +++ + LRD A Sbjct: 67 DTAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-DNVQRWLRELRDHAD------ 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++ G K D+ +R + ++ Sbjct: 116 ----------------------------SNIVIMMAGNKSDL-----KHLRAVSEEDGQA 142 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 +A G + L S + TI + + + Sbjct: 143 LAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQ 185 >gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago truncatula] Length = 220 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 78/265 (29%), Gaps = 51/265 (19%) Query: 44 QRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSG 102 R++ ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 2 SSRRRVGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEG 61 Query: 103 KSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRD 162 ++ +W+ + + R L +L+ D+++P F ++ K LRD Sbjct: 62 RT-VKAQIWDTAGQERYRAITSAYYR----GALGALLVYDVTKPTTF-DNVTRWLKELRD 115 Query: 163 TAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIR 222 A ++++G K D+ +R Sbjct: 116 HADA----------------------------------NIVIMLIGNKTDL-----KHLR 136 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 +S A G + + S + T + + S + Sbjct: 137 AVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTANEPAAAAN 196 Query: 283 IWFGTDSWSKIGDTGAQSVERIGAT 307 I G K G Sbjct: 197 IKEG-----KTIAIGGSETTNTNKP 216 >gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella] Length = 218 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 80/270 (29%), Gaps = 61/270 (22%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 ++ VG K D+ +R Sbjct: 115 ------------------------------SNIVIMQVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 ++ A G + + S +V I + + DS Sbjct: 140 KAFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQIH---------------DS 184 Query: 290 WSKIGDTGAQSVERIGATFGMEVPQLQLEK 319 + G + +V+ I + + + + Sbjct: 185 PTSDGSHPSNNVQTIHVAPTTDEDRRKRVQ 214 >gi|66556180|ref|XP_392967.2| PREDICTED: similar to Rab-protein 1 CG3320-PA, isoform A [Apis mellifera] Length = 206 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 65/234 (27%), Gaps = 46/234 (19%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSP 105 +L++G VGK+ + +F D + T+ +++ Sbjct: 1 MSTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTI-DLDGKT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + R +I++ D + + F +++ + + A Sbjct: 60 IKLQIWDTAGQERFRTITSSYYR----GAHGIIVVYDCTDQETF-NNVKQWLEEIDRYAC 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 + K+ +VG K D+ + + Sbjct: 115 DNVNKL----------------------------------LVGNKCDLHT-----KKVVD 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNE 279 + A +G L S K + T+ P + N+ Sbjct: 136 YTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGNSDPANK 189 >gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula] Length = 217 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 27/231 (11%), Positives = 70/231 (30%), Gaps = 46/231 (19%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSP 105 + ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 1 MSSKDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 60 IKAQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 ++ VG K D+ +R Sbjct: 115 ----------------------------------SNIVIMAVGNKCDLRH-----LRAVP 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 ++ + G + + S + I + + ++ V Sbjct: 136 TEEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQSSTANDVP 186 >gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus] Length = 202 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 27/243 (11%), Positives = 68/243 (27%), Gaps = 51/243 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLNEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKCDL-----TENKVVSYET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS-----PAHPFRSHVVDFNEPLCI 283 ++ A IG + S K + + + V +P+ Sbjct: 136 AKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNNARPPTVQIRGQPVNQ 195 Query: 284 WFG 286 G Sbjct: 196 KSG 198 >gi|157764948|ref|XP_001674817.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] gi|39583371|emb|CAE66345.1| Hypothetical protein CBG11597 [Caenorhabditis briggsae] Length = 366 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 89/355 (25%), Positives = 157/355 (44%), Gaps = 38/355 (10%) Query: 31 SIQDIAG--------RLAEEQQRLRQLEATTTP---------KERTILVLGSKCVGKTTA 73 +I D+A R AE +Q+L E I++ G++ + Sbjct: 2 NIWDLAKQKLVENKQRAAELEQKLDDENGAVNDNYLAEVRRRHESHIIIAGNRQI----I 57 Query: 74 INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQ 133 I+ F E + LE+++ RR G V N+WELG + +LL VP+ ++ Sbjct: 58 IHVEFSGAERRFE-RIGLEFTYARRT-RGNVKDVANLWELGGGSSVTELLSVPITAKNVE 115 Query: 134 QLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKD 193 ++I++LD++ W +E +R + + + L+ + +++ R+ + Sbjct: 116 TCSLIVLLDMTNLSEMWITIEKTVDTVRRLVENLERQ-DANLQTRMAEKSRLRLEKYESS 174 Query: 194 SEKLD-PLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 S K+ P P P+ IV KYD F F+ R+H C+ LR +A+ G L+ YS +M + K Sbjct: 175 SLKMCAPCPLPMTIVATKYDEFQNFESEKRRHLCQFLRFLAYSYGANLMMYSSRMEQFPK 234 Query: 253 VLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIGATFGMEV 312 ++++ I H FG+ + ++ D N+P+ I G D+ IG +GA+ + Sbjct: 235 LVKNMISHFAFGTVCP--QGYITDHNKPMFIKCGFDNLEAIGIPPGSD-NFMGASSPFNL 291 Query: 313 PQLQ-----LEKQKLKE-----TTDPAKDPGFKELVIDEIRSQKNEELAGLMRDV 357 + +K + DP DP FKE ID + K +EL +R Sbjct: 292 WRESFISLWPQKTGNVDVEDTKKQDPMIDPVFKEPSIDNLVEIKRKELENHIRSK 346 >gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis] gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis] Length = 205 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 26/228 (11%), Positives = 64/228 (28%), Gaps = 46/228 (20%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSP 105 +L++G VGK+ + +F D + T+ +++ G Sbjct: 1 MSTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + R +I++ D++ + F +++ + + A Sbjct: 60 IKLQIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYAC 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 + + K+ +VG K D+ + + Sbjct: 115 ENVNKL----------------------------------LVGNKCDLTT-----KKVVD 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 + A +G L S K + T+ Sbjct: 136 FTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPSPAPQ 183 >gi|149426497|ref|XP_001518037.1| PREDICTED: similar to rab11, partial [Ornithorhynchus anatinus] Length = 331 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 32/242 (13%), Positives = 73/242 (30%), Gaps = 51/242 (21%) Query: 60 ILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDN 118 ++++G VGK+ +++F + ++ T+ +E++ G +W+ + Sbjct: 129 LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIWDTAGQER 187 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREI 178 + R + +L+ D+++ + ++E K LRD A Sbjct: 188 YRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------------- 229 Query: 179 LEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGG 238 +++VG K D+ +R R+ A G Sbjct: 230 ---------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARAFAEKNGL 263 Query: 239 ALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGA 298 + + S + TI + + + D E + I Sbjct: 264 SFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRRENDMSPSN--NVVPIHVPPT 318 Query: 299 QS 300 Sbjct: 319 TE 320 >gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus] gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus] Length = 217 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 77/254 (30%), Gaps = 50/254 (19%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIW 65 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ + ++E K LRD A Q Sbjct: 66 DTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADQ----- 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R R+ Sbjct: 116 -----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARA 141 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 A + + S + I + + + D N+P D+ Sbjct: 142 FAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQKQIRNDAD-NDP---SPSGDNVK 197 Query: 292 KIGDTGAQSVERIG 305 I S + Sbjct: 198 AISIAPTDSSDTRK 211 >gi|131785|sp|P22125|RAB1_DISOM Ras-related protein ORAB-1 gi|213123|gb|AAA49234.1| GTP-binding protein Length = 202 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 71/239 (29%), Gaps = 52/239 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ G + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKCDLTT-----KKVVDYTT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAH------PFRSHVVDFNEPL 281 + A +G L S K + T+ +S+V + P+ Sbjct: 136 AKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEKSNVNIQSTPV 194 >gi|116498990|gb|EAU81885.1| hypothetical protein CC1G_06096 [Coprinopsis cinerea okayama7#130] Length = 209 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 69/227 (30%), Gaps = 46/227 (20%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQV 107 E + ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 2 AEGSNYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDG-KTVK 60 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 +W+ + + R + +L+ D+++ + ++ K LRD A Sbjct: 61 AQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHATYV-NVTRWLKELRDHAD-- 113 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 +++VG K D+ +R Sbjct: 114 --------------------------------SNIVIMLVGNKSDL-----KHLRAVPTD 136 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 ++ A G + + S + TI + + Sbjct: 137 EAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLESS 183 >gi|157354269|emb|CAO46870.1| unnamed protein product [Vitis vinifera] Length = 215 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 79/251 (31%), Gaps = 53/251 (21%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQV 107 ++++G VGK+ +++F + ++ T+ +E++ G++ Sbjct: 4 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT-VK 62 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 +W+ + + R L +L+ D+++P F ++ K LRD A Sbjct: 63 AQIWDTAGQERYRAITSAYYR----GALGALLVYDVTKPTTF-ENVSRWLKELRDHAD-- 115 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 ++++G K D+ +R Sbjct: 116 --------------------------------SNIVIMLIGNKTDL-----KHLRAVATE 138 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFR------SHVVDFNEPL 281 + A G + + S + TI + + + + L Sbjct: 139 DAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTLSSDDPAPAGIKEGKTL 198 Query: 282 CIWFGTDSWSK 292 + G+D+ +K Sbjct: 199 VVD-GSDTNTK 208 >gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521] gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521] Length = 213 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 27/250 (10%), Positives = 73/250 (29%), Gaps = 51/250 (20%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQV 107 + ++++G GK+ +++F + ++ T+ +E++ G Sbjct: 2 AAESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDG-KTVK 60 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 +W+ + + R + +L+ D+++ + ++ K LRD A Sbjct: 61 AQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHPTYV-NVSRWLKELRDHAD-- 113 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 +++VG K D+ +R Sbjct: 114 --------------------------------SNIVIMLVGNKSDLRH-----LRAVPTE 136 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP-----LC 282 ++ A + + S + I + ++ D +P + Sbjct: 137 EAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDDVIKPSGGETIT 196 Query: 283 IWFGTDSWSK 292 + D + Sbjct: 197 VQPSADDGGQ 206 >gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus] Length = 217 Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 35/254 (13%), Positives = 78/254 (30%), Gaps = 50/254 (19%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIW 65 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ + ++E K LRD A Q Sbjct: 66 DTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADQ----- 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R R+ Sbjct: 116 -----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEARA 141 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 A + + S +V I + + + D N+P D+ Sbjct: 142 FAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQKQIRNDAD-NDP---SPSGDNVK 197 Query: 292 KIGDTGAQSVERIG 305 I S + Sbjct: 198 AISIAPTDSSDTRK 211 >gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus tropicalis] gi|148230336|ref|NP_001080138.1| RAB1, member RAS oncogene family [Xenopus laevis] gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis] gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus tropicalis] gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus tropicalis] Length = 204 Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 64/217 (29%), Gaps = 46/217 (21%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSP 105 +L++G VGK+ + +F D + T+ +++ G Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + R +I++ D++ + F +++ + + A Sbjct: 60 IKLQIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 + + K+ +VG K D+ + + Sbjct: 115 ENVNKL----------------------------------LVGNKCDLTT-----KKVVD 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 136 YTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 172 >gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum] gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba] gi|738942|prf||2001457K GTP-binding protein gi|1098293|prf||2115367A small GTP-binding protein Length = 202 Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 26/225 (11%), Positives = 63/225 (28%), Gaps = 46/225 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDVTDEESF-NNVKQWLSEIDRYASDNV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ R Sbjct: 115 NKL----------------------------------LVGNKCDL-----TENRAVPYET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 ++ A IG + S K + + A ++ Sbjct: 136 AKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKERMASQPTNN 180 >gi|149692307|ref|XP_001496560.1| PREDICTED: similar to rab11 [Equus caballus] Length = 255 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 78/262 (29%), Gaps = 51/262 (19%) Query: 40 AEEQQRLRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRR 98 +++ L T I+++G VGK+ +++F + ++ T+ +E++ Sbjct: 33 SDQSAVFTSLSTPTPISSLVIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 92 Query: 99 IGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYK 158 G +W+ + + R + +L+ D+++ + ++E K Sbjct: 93 QVDG-KTIKAQIWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLK 146 Query: 159 GLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFD 218 LRD A +++VG K D+ Sbjct: 147 ELRDHAD----------------------------------SNIVIMLVGNKSDLRH--- 169 Query: 219 PIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFN 278 +R R+ A G + + S + TI + + + D Sbjct: 170 --LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQK---QMSDRR 224 Query: 279 EPLCIWFGTDSWSKIGDTGAQS 300 E + I Sbjct: 225 ENDMSPSN--NVVPIHVPPTTE 244 >gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa] Length = 203 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 72/244 (29%), Gaps = 52/244 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLNEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + + Sbjct: 115 NKL----------------------------------LVGNKCDLTAN-----KVVSYET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG-SPAHPFRSH-----VVDFNEPLC 282 ++ A IG + S K + + + P ++ V +P+ Sbjct: 136 AKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNNARPPTVQIRGQPVN 195 Query: 283 IWFG 286 G Sbjct: 196 QKSG 199 >gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa (japonica cultivar-group)] gi|109940139|sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa (japonica cultivar-group)] gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa (japonica cultivar-group)] gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa (japonica cultivar-group)] gi|125526416|gb|EAY74530.1| hypothetical protein OsI_002377 [Oryza sativa (indica cultivar-group)] gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_002158 [Oryza sativa (japonica cultivar-group)] Length = 202 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 67/227 (29%), Gaps = 47/227 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLNEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ R + Sbjct: 115 NKL----------------------------------LVGNKCDLA-----ENRVVSYEA 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG-SPAHPFRSHV 274 +++A IG L S K + T+ + P + Sbjct: 136 GKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNAS 182 >gi|148236881|ref|NP_001088852.1| hypothetical protein LOC496163 [Xenopus laevis] gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis] Length = 218 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 30/251 (11%), Positives = 73/251 (29%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R+ A + + S + I + + + + G ++ Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADRAAHEDS----PG-NN 194 Query: 290 WSKIGDTGAQS 300 I T Sbjct: 195 VVDISVTPTMD 205 >gi|157328625|emb|CAO22323.1| unnamed protein product [Vitis vinifera] Length = 203 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 70/244 (28%), Gaps = 52/244 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLNEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + + Sbjct: 115 NKL----------------------------------LVGNKCDLTAN-----KVVSYET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG-SPAHPF-----RSHVVDFNEPLC 282 ++ A IG + S K + + + P V +P+ Sbjct: 136 AKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNTARPPTVQIRGQPVN 195 Query: 283 IWFG 286 G Sbjct: 196 QKSG 199 >gi|55742328|ref|NP_001007162.1| RAB1A, member RAS oncogene family [Danio rerio] gi|27817324|emb|CAD61089.1| novel protein similar to human RAS oncogene family member RAB1B [Danio rerio] gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio] gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio] Length = 201 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 26/214 (12%), Positives = 64/214 (29%), Gaps = 46/214 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ G + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKCDLTT-----KKVVDYTT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 136 AKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169 >gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti] gi|108879268|gb|EAT43493.1| ras-related protein Rab-1A, putative [Aedes aegypti] Length = 206 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 30/250 (12%), Positives = 69/250 (27%), Gaps = 48/250 (19%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKS 104 + +L++G VGK+ + +F D + T+ +++ Sbjct: 2 SASAMSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTI-DLDGK 60 Query: 105 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 164 + +W+ + + R +I++ D + + F +++ + + A Sbjct: 61 TIKLQIWDTAGQERFRTITSSYYR----GAHGIIVVYDCTDQESF-NNVKTWLEEIERYA 115 Query: 165 QQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKH 224 + + K+ +VG K D+ + Sbjct: 116 CENVNKL----------------------------------LVGNKCDL-----QTKKVV 136 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIW 284 A+ +G L S K + T+ P + + I Sbjct: 137 DTTTAMEYANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAAEAP--SAVKID 194 Query: 285 FGTDSWSKIG 294 SK G Sbjct: 195 KSRSVESKSG 204 >gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis] Length = 216 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 30/251 (11%), Positives = 72/251 (28%), Gaps = 51/251 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 R A + + S + I + + + +E G ++ Sbjct: 140 RVFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDES----PG-NN 194 Query: 290 WSKIGDTGAQS 300 I Sbjct: 195 VVDISVPPTTD 205 >gi|42543204|pdb|1OIW|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gtpgammas gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex With Gdp And Pi Length = 191 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 68/212 (32%), Gaps = 46/212 (21%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 25 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIW 83 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + L+ + R + +L+ D+++ + ++E K LRD A Sbjct: 84 DTAGLERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------ 132 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R R+ Sbjct: 133 ----------------------------SNIVIMLVGNKSDLRH-----LRAVPTDEARA 159 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 A G + + S + TI + Sbjct: 160 FAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191 >gi|52345666|ref|NP_001004880.1| MGC88884 protein [Xenopus tropicalis] gi|49671143|gb|AAH75268.1| MGC88884 protein [Xenopus tropicalis] Length = 218 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 30/259 (11%), Positives = 75/259 (28%), Gaps = 53/259 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN--- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 -------------------------------NIVIMLVGNKSDLRH-----LRAVPTDEA 139 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEP-------LC 282 R+ A + + S + I + + + + + Sbjct: 140 RAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADRAAHEDSPGNNVVDIS 199 Query: 283 IWFGTDSWSKIGDTGAQSV 301 + D I Q++ Sbjct: 200 VTPTMDGQRSIKLQCCQNL 218 >gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia] Length = 203 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 26/226 (11%), Positives = 64/226 (28%), Gaps = 46/226 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLSEIDRYASDSV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKCDL-----TAQKVVSTET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 ++ A IG + S K + + A S+ Sbjct: 136 AQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNN 181 >gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis] gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis] Length = 202 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 65/226 (28%), Gaps = 46/226 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLNEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + R Sbjct: 115 NKL----------------------------------LVGNKCDLTAN-----RAVDYDT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 ++ A IG L S K + T+ A + Sbjct: 136 AKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNS 181 >gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct] gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct] Length = 206 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 64/217 (29%), Gaps = 46/217 (21%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSP 105 +L++G VGK+ + +F D + T+ +++ G Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + R +I++ D++ + F +++ + + A Sbjct: 60 IKLQIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 + + K+ +VG K D+ + + Sbjct: 115 ENVNKL----------------------------------LVGNKCDLTT-----KKVVD 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 136 YTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172 >gi|4758988|ref|NP_004152.1| RAB1A, member RAS oncogene family [Homo sapiens] gi|6679587|ref|NP_033022.1| RAB1, member RAS oncogene family [Mus musculus] gi|45433570|ref|NP_112352.2| RAB1, member RAS oncogene family [Rattus norvegicus] gi|55741705|ref|NP_001003153.1| RAB1A, member RAS oncogene family [Canis lupus familiaris] gi|109103156|ref|XP_001090072.1| PREDICTED: similar to RAB1, member RAS oncogene family isoform 4 [Macaca mulatta] gi|149727528|ref|XP_001493347.1| PREDICTED: similar to RAB1A, member RAS oncogene family [Equus caballus] gi|51338603|sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A (YPT1-related protein) gi|51338604|sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A (YPT1-related protein) gi|51338716|sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A gi|51338790|sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus] gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens] gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus] gi|550060|gb|AAA60240.1| GTP-binding protein gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus] gi|6006435|emb|CAB56775.1| rab1 [Canis familiaris] gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens] gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus] gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens] gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus] gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus] gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens] gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens] gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens] gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct] gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct] gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus] gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus] gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus] gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus] gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens] gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens] gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus] gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct] gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus] gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus] gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus] Length = 205 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 64/217 (29%), Gaps = 46/217 (21%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSP 105 +L++G VGK+ + +F D + T+ +++ G Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + R +I++ D++ + F +++ + + A Sbjct: 60 IKLQIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 + + K+ +VG K D+ + + Sbjct: 115 ENVNKL----------------------------------LVGNKCDLTT-----KKVVD 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 136 YTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172 >gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum] Length = 202 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 25/225 (11%), Positives = 66/225 (29%), Gaps = 46/225 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLNEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + + Sbjct: 115 NKL----------------------------------LVGNKCDLAAN-----KVVSSET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 ++ A IG + S K + + A ++ Sbjct: 136 AKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPANN 180 >gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza sativa] Length = 202 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 68/225 (30%), Gaps = 46/225 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLNEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ R + Sbjct: 115 NKL----------------------------------LVGNKCDLA-----ENRVVSYEA 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH 273 +++A IG L S K + T+ A R++ Sbjct: 136 GKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQGRTN 180 >gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3 gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3 gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3 Length = 172 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 69/217 (31%), Gaps = 46/217 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVM 108 + ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 1 GSDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKA 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ L+ + R + +L+ D+++ + ++E K LRD A Sbjct: 60 QIWDTAGLERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD--- 111 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 +++VG K D+ +R Sbjct: 112 -------------------------------SNIVIMLVGNKSDLRH-----LRAVPTDE 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 R+ A G + + S + TI + Sbjct: 136 ARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 172 >gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis] Length = 217 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 25/234 (10%), Positives = 69/234 (29%), Gaps = 49/234 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ +W Sbjct: 8 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDD-KVIKAQIW 66 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ F ++E K LRD Sbjct: 67 DTAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTDA----- 116 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R + ++ Sbjct: 117 -----------------------------NIVIMLVGNKADLRH-----LRAVSIEDGKA 142 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 A + S + + + + + + +P + Sbjct: 143 FAERENTYFMETSALESTNVENAFTEVLSQIYRIVS---KKALDVGEDPAAVPS 193 >gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi] Length = 215 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 31/255 (12%), Positives = 76/255 (29%), Gaps = 52/255 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEG-KTVKAQIW 65 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ + ++E K LRD A Q Sbjct: 66 DTAGQERYRAITSAYYR----GAVGALLVYDIAKHVT-YENVERWLKELRDHADQ----- 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R ++ Sbjct: 116 -----------------------------NIVIMLVGNKSDLRH-----LRAVPTDEAKA 141 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 A + + S + I + S + D + G++ Sbjct: 142 YAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSV--SVKHVGGDNRAAIS-TPGSNG-- 196 Query: 292 KIGDTGAQSVERIGA 306 I + + Sbjct: 197 -IVISPTAEPQTKKQ 210 >gi|72535190|ref|NP_001026957.1| RAB1B, member RAS oncogene family [Sus scrofa] gi|75056559|sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa] Length = 205 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 63/217 (29%), Gaps = 46/217 (21%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSP 105 +L++G VGK+ + +F D + T+ +++ G Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + R +I++ D++ F +++ + + A Sbjct: 60 IKLQIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQGSF-NNVKQWLQEIDRYAS 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 + + K+ +VG K D+ + + Sbjct: 115 ENVNKL----------------------------------LVGNKCDLTT-----KKVVD 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 136 YTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172 >gi|149725600|ref|XP_001491236.1| PREDICTED: hypothetical protein [Equus caballus] Length = 239 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 27/250 (10%), Positives = 69/250 (27%), Gaps = 56/250 (22%) Query: 24 GGESATPSIQDIAGRLAEEQQRLR----------QLEATTTPKERTILVLGSKCVGKTTA 73 + A + E + +L++G VGK+ Sbjct: 3 APARRGRGLWGGAATILEREAEQSRLGATERAAAAAMNPEYDYLFKLLLIGDSGVGKSCL 62 Query: 74 INKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRTHGL 132 + +F D + T+ +++ G + +W+ + + R Sbjct: 63 LLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKLQIWDTAGQERFRTITSSYYR---- 117 Query: 133 QQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNK 192 +I++ D++ + + +++ + + A + + K+ Sbjct: 118 GAHGIIVVYDVTDQES-YANVKQWLQEIDRYASENVNKL--------------------- 155 Query: 193 DSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAK 252 +VG K D+ + + + A +G L S K + Sbjct: 156 -------------LVGNKSDLTT-----KKVVDNTTAKEFADSLGIPFLETSAKNATNVE 197 Query: 253 VLRDTICHLG 262 T+ Sbjct: 198 QAFMTMAAEI 207 >gi|15239462|ref|NP_200894.1| AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding [Arabidopsis thaliana] gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana] gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana] gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana] Length = 217 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 69/236 (29%), Gaps = 49/236 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ +W Sbjct: 9 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD-KIVKAQIW 67 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ F ++E K LRD Sbjct: 68 DTAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTDA----- 117 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 ++ VG K D+ +R + ++ Sbjct: 118 -----------------------------NIVIMFVGNKADLRH-----LRAVSTEDAKA 143 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 A + S + + + + + ++P + G Sbjct: 144 FAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRK---ALDIGDDPAALPKGQ 196 >gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II] gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502] gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum] gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II] gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis] Length = 203 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 63/214 (29%), Gaps = 46/214 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLE-NKTVKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ F +++ + + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDVTDRDSF-DNVKQWIQEIDRYAMENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ S R T Sbjct: 115 NKL----------------------------------LVGNKCDLVS-----KRVVTSDE 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 R +A G + S K + T+ Sbjct: 136 GRELADSHGIKFIETSAKNAYNVEQAFHTMAGEI 169 >gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe] gi|141306|sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 (RAB) gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe] gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe] gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe] Length = 214 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 25/225 (11%), Positives = 67/225 (29%), Gaps = 46/225 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 +++G VGK+ + +F + ++ T+ +E++ + +W Sbjct: 6 EYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVL-DNKKIKAQIW 64 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +++ D+++ F ++ K LR+ A Sbjct: 65 DTAGQERYRAITSAYYR----GAVGALIVYDITKQSSF-DNVGRWLKELREHAD------ 113 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R + ++ Sbjct: 114 ----------------------------SNIVIMLVGNKTDLLH-----LRAVSTEEAQA 140 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVD 276 A + + S + T+ F ++ D Sbjct: 141 FAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDD 185 >gi|157761211|ref|XP_001672948.1| Hypothetical protein CBG01077 [Caenorhabditis briggsae] gi|39588485|emb|CAE58008.1| Hypothetical protein CBG01077 [Caenorhabditis briggsae] Length = 205 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 64/215 (29%), Gaps = 46/215 (21%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQV 107 +L++G VGK+ + +F D + T+ +++ G Sbjct: 3 AMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIK 61 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 + +W+ + + R +I++ D++ + F +++ + + A + Sbjct: 62 LQIWDTAGQERFRTITSSYYR----GAHGIIVVYDITDQETF-NNVKQWLQEIDRYACEN 116 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 + K+ +VG K D+ R + Sbjct: 117 VNKL----------------------------------LVGNKCDL-----TAKRAVETQ 137 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 138 AAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEI 172 >gi|17558550|ref|NP_503397.1| RAB family member (rab-1) [Caenorhabditis elegans] gi|3806150|gb|AAC69218.1| Rab family protein 1 [Caenorhabditis elegans] Length = 205 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 64/215 (29%), Gaps = 46/215 (21%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQV 107 +L++G VGK+ + +F D + T+ +++ G Sbjct: 3 AMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIK 61 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 + +W+ + + R +I++ D++ + F +++ + + A + Sbjct: 62 LQIWDTAGQERFRTITSSYYR----GAHGIIVVYDITDQETF-NNVKQWLQEIDRYACEN 116 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 + K+ +VG K D+ R + Sbjct: 117 VNKL----------------------------------LVGNKCDL-----TAKRAVETQ 137 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 138 AAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEI 172 >gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens] Length = 257 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 26/214 (12%), Positives = 64/214 (29%), Gaps = 46/214 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ G + Sbjct: 56 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKL 114 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + + A + + Sbjct: 115 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYASENV 169 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 170 NKL----------------------------------LVGNKCDLTT-----KKVVDYTT 190 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 191 AKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 224 >gi|3024501|sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus] Length = 216 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 70/223 (31%), Gaps = 46/223 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 I+++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-KTVKAQIW 66 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ Q F +++ + LRD A Sbjct: 67 DTAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-DNVQRWLRELRDHAD------ 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++ G K D+ +R + + Sbjct: 116 ----------------------------SNIVIMMAGNKSDLNH-----LRAVSEDDGGA 142 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 ++ G + L S + TI + + + Sbjct: 143 LSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQ 185 >gi|118087671|ref|XP_419342.2| PREDICTED: hypothetical protein [Gallus gallus] gi|126303762|ref|XP_001374724.1| PREDICTED: similar to RAB1A, member RAS oncogene family, [Monodelphis domestica] Length = 205 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 64/217 (29%), Gaps = 46/217 (21%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSP 105 +L++G VGK+ + +F D + T+ +++ G Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + R +I++ D++ + F +++ + + A Sbjct: 60 IKLQIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 + + K+ +VG K D+ + + Sbjct: 115 ENVNKL----------------------------------LVGNKCDLTT-----KKVVD 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 136 YTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172 >gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa (japonica cultivar-group)] gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa (japonica cultivar-group)] gi|125595229|gb|EAZ35288.1| hypothetical protein OsJ_018771 [Oryza sativa (japonica cultivar-group)] Length = 217 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 23/236 (9%), Positives = 70/236 (29%), Gaps = 49/236 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ +W Sbjct: 8 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDD-KVVKAQIW 66 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +++ D+++ F ++E + L+D Sbjct: 67 DTAGQERYRAITSAYYR----GAVGALVVYDVTRHVTF-ENVERWMRELKDHTDA----- 116 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R + ++ Sbjct: 117 -----------------------------NIVIMLVGNKADLRH-----LRAVSTEDAKA 142 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 A + S + + + + + + ++P G Sbjct: 143 FAEKENTFFMETSALESMNVENAFTEVLTQIYHVVS---KKALDIGDDPAAPPKGQ 195 >gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum] Length = 203 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 27/226 (11%), Positives = 63/226 (27%), Gaps = 46/226 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLSEIDRYASD-- 112 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 I+VG K D+ + R + Sbjct: 113 --------------------------------GVNKILVGNKSDLTAN-----RVVSYET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 ++ A IG L S K + + A ++ Sbjct: 136 AKAFADEIGIPFLETSAKDATNVEQAFMAMTSAIKNRMASQPANNS 181 >gi|466171|sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa] gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa] gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A] gi|384298|prf||1905382A small GTP-binding protein Length = 203 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 65/238 (27%), Gaps = 48/238 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ G + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTVKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R + ++ D++ F +++ + + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGICVVYDVTDMDSF-NNVKQWLQEIDRYATEGV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D + Sbjct: 115 NKL----------------------------------LVGNKSD-----MTDKKVVEYTV 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFG 286 + A +G L S K + T+ ++ + + G Sbjct: 136 AKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNNT--KASVNVSPG 191 >gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus] Length = 203 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 26/226 (11%), Positives = 64/226 (28%), Gaps = 46/226 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVE-QDAKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDVTDEESF-NNVKQWLSEIDRYASDNV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + R + Sbjct: 115 NKL----------------------------------LVGNKCDLTAN-----RAVSYDT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 + A IG + S K + + A ++ Sbjct: 136 AKEFADQIGIPFMETSAKDATNVEQAFMGMSASIKNRMASQPSANN 181 >gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max] Length = 202 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 25/214 (11%), Positives = 62/214 (28%), Gaps = 46/214 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDVTDEESF-NNVKQWLSEIDRYASDNV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + R + Sbjct: 115 NKL----------------------------------LVGNKCDLEAN-----RAVSYET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 ++ A IG + S K + + Sbjct: 136 AKAFADGIGIPFMETSAKDATNVEQAFMAMTASI 169 >gi|56205120|emb|CAI24449.1| RAB1, member RAS oncogene family [Mus musculus] Length = 202 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 26/214 (12%), Positives = 64/214 (29%), Gaps = 46/214 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ G + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKCDLTT-----KKVVDYTT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 136 AKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 169 >gi|119584836|gb|EAW64432.1| dynein, cytoplasmic 1, light intermediate chain 1, isoform CRA_b [Homo sapiens] Length = 224 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 69/218 (31%), Gaps = 39/218 (17%) Query: 138 ILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREILEQRTVERVGQQNKDSE-- 195 +L++D+S+P L+ +R+ ++ K+ PE + +EQ+ + + + E Sbjct: 1 MLVVDMSKPWTALDSLQKWASVVREHVDKL--KIPPEEMKQMEQKLIRDFQEYVEPGEDF 58 Query: 196 ---------------------------KLDPLPFPVIIVGGKYDVFSGFDPII------R 222 L PV++V K D S + Sbjct: 59 PASPQRRNTASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHF 118 Query: 223 KHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLC 282 +R G AL++ S K K ++ I +G VV + + Sbjct: 119 DFIQSHIRKFCLQYGAALIYTSVKENKNIDLVYKYIVQKLYG--FPYKIPAVVVEKDAVF 176 Query: 283 IWFGTDSWSKIGDTGAQSVERIGATFGMEVPQLQLEKQ 320 I G D+ KIG ++ ++ Sbjct: 177 IPAGWDNDKKIGILHENFQTLKAEDNFEDIITKPPVRK 214 >gi|156545982|ref|XP_001607208.1| PREDICTED: similar to rab1 [Nasonia vitripennis] Length = 211 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 30/241 (12%), Positives = 66/241 (27%), Gaps = 47/241 (19%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSP 105 +L++G VGK+ + +F D + T+ +++ Sbjct: 1 MSTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTI-DLDGKT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + R +I++ D + + F +++ + + A Sbjct: 60 IKLQIWDTAGQERFRTITSSYYR----GAHGIIVVYDCTDQESF-NNVKQWLEEIDRYAC 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 + K+ +VG K D+ + + Sbjct: 115 DNVNKL----------------------------------LVGNKSDLHT-----KKVVD 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWF 285 + A +G L S K + T+ P D L I Sbjct: 136 YTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKSRVGPPSSGAS-DQTSKLKIDQ 194 Query: 286 G 286 G Sbjct: 195 G 195 >gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa] Length = 203 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 25/226 (11%), Positives = 66/226 (29%), Gaps = 46/226 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MTPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDVTDQESF-NNVKQWLNEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + + Sbjct: 115 NKL----------------------------------LVGNKSDLTAN-----KVVSYET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 ++ A IG + S K + + A ++ Sbjct: 136 AKAFADEIGIPFMETSAKNAINVEQAFMAMAADIKNRMASQPAANN 181 >gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bombyx mori] gi|2338554|gb|AAB67169.1| small GTP-binding protein [Bombyx mori] Length = 202 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 69/239 (28%), Gaps = 52/239 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV-DLNGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D + F ++++ + + A + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDCTDQDSF-SNVKQWLEEIDRYACDNV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKCDLTT-----KKVVDFST 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG------FGSPAHPFRSHVVDFNEPL 281 + A +G L S K + T+ + A P +D +P+ Sbjct: 136 AKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSTGAAPAGHVKIDQGQPI 194 >gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa (japonica cultivar-group)] gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa (japonica cultivar-group)] Length = 215 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 30/225 (13%), Positives = 72/225 (32%), Gaps = 46/225 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 I+++G VGK+ +++F + ++ T+ +E++ G++ Sbjct: 6 DNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQT-IKAQ 64 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ Q F +++ + LRD A Sbjct: 65 IWDTAGQERYRAITSAYYR----GAVGALLVYDITKKQTF-ENIQRWLRELRDHAD---- 115 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +++VG K D+ +R Sbjct: 116 ------------------------------SNIVIMMVGNKSDLNH-----LRSVPEEDG 140 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 +++A G + L S + TI + + Sbjct: 141 QALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQ 185 >gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa (japonica cultivar-group)] gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa (japonica cultivar-group)] gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa (japonica cultivar-group)] gi|125550513|gb|EAY96222.1| hypothetical protein OsI_017455 [Oryza sativa (indica cultivar-group)] gi|125592518|gb|EAZ32577.1| hypothetical protein OsJ_016060 [Oryza sativa (japonica cultivar-group)] Length = 220 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 75/252 (29%), Gaps = 56/252 (22%) Query: 52 TTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNV 110 ++++G VGK+ +++F + ++ T+ +E++ G + Sbjct: 9 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEG-KIIKAQI 67 Query: 111 WELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEK 170 W+ + + R L +L+ D+S+P F ++ K LRD A Sbjct: 68 WDTAGQERYRAITSAYYR----GALGAVLVYDVSKPTTF-DNISRWLKELRDHADA---- 118 Query: 171 VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLR 230 +++VG K D+ +R Sbjct: 119 ------------------------------NIRIMLVGNKTDL-----KHLRAVATDDAH 143 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH---------VVDFNEPL 281 A G + + S + I + + + + V + + Sbjct: 144 KFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKPVASDEGGAGAAGGVKEGKTI 203 Query: 282 CIWFG-TDSWSK 292 + G +S K Sbjct: 204 NVAAGDANSEKK 215 >gi|56809369|gb|AAW31507.1| cytoplasmic dynein 2 light intermediate chain [Tetrahymena thermophila] Length = 474 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 81/358 (22%), Positives = 151/358 (42%), Gaps = 20/358 (5%) Query: 12 QRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVGKT 71 R Q+ + S D+ E + + E+T++V+G K GKT Sbjct: 2 NRNQEDNEQENNEVNKGDRSNIDLWSHAEESELKQGFA----KNLEKTLVVIGDKGSGKT 57 Query: 72 TA--INKFFDREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQLLEVPMRT 129 T I K + + PT+ L+Y + RR + + + + +ELG +++ +P+ Sbjct: 58 TFVNILKNMQQVDDRYIPTVGLDYQYVRRTNANRKELI-HSYELGGGKEQSKMITIPISK 116 Query: 130 HGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ--QMMEKVTPELREILE--QRTVE 185 + IL+LDLS+P + ++ +R + TPE + + + Sbjct: 117 QNFRDAFYILVLDLSKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQ 176 Query: 186 RVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGALLFYSQ 245 + + D ++ LP I++G KYD+F D RK R LR +AH+ G +L F S Sbjct: 177 ARFESHPDKNRVKILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASS 236 Query: 246 KMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQSVERIG 305 K L + +R + + FG + + + P+ I D +K+G Sbjct: 237 KNNDLFQNVRSIMNNALFG--KTLAQYYQSEHLRPIEISLSKDELAKMGLPQISGNMTYL 294 Query: 306 ATFGMEVPQLQLEKQKLKETTDPAKDP-----GFKELVIDEIRSQKNEELAGLMRDVL 358 F + + E + + D ++DP F E ID IR++K++E+ + ++ + Sbjct: 295 EAFKKVIQETFPENKGAQ--NDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKEFM 350 >gi|157344192|emb|CAO69125.1| unnamed protein product [Vitis vinifera] Length = 215 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 74/236 (31%), Gaps = 48/236 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 I+++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-KTVKAQIW 66 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ Q F +++ + LRD A Sbjct: 67 DTAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-ENVQRWLRELRDHAD------ 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++ G K D+ +R + + Sbjct: 116 ----------------------------SNIVIMMAGNKSDLNH-----LRAVSGDDAQI 142 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 +A G + L S + TI + + + + + GT Sbjct: 143 LAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKALAAQ--EAASINLPHGT 196 >gi|15217568|ref|NP_172434.1| ATRAB11C (ARABIDOPSIS RAB GTPASE HOMOLOG A2A); GTP binding [Arabidopsis thaliana] gi|3024516|sp|O04486|RB11C_ARATH Ras-related protein Rab11C gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene. [Arabidopsis thaliana] gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana] gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana] gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana] gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana] Length = 217 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 80/252 (31%), Gaps = 53/252 (21%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQV 107 ++++G VGK+ +++F + ++ T+ +E++ G++ Sbjct: 4 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT-VK 62 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 +W+ + + R L +L+ D+++P F ++ K LRD A Sbjct: 63 AQIWDTAGQERYRAITSAYYR----GALGALLVYDVTKPTTF-ENVSRWLKELRDHAD-- 115 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 ++++G K D+ +R Sbjct: 116 --------------------------------SNIVIMLIGNKTDL-----KHLRAVATE 138 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPA-------HPFRSHVVDFNEP 280 +S A G + + S + TI + + + + + Sbjct: 139 DAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANANIKEGQT 198 Query: 281 LCIWFGTDSWSK 292 + + ++S +K Sbjct: 199 IDVAATSESNAK 210 >gi|147844837|emb|CAN83336.1| hypothetical protein [Vitis vinifera] gi|157344444|emb|CAO69827.1| unnamed protein product [Vitis vinifera] Length = 216 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 28/249 (11%), Positives = 73/249 (29%), Gaps = 53/249 (21%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ +W Sbjct: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDE-KVVKAQIW 67 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ F +++ K LRD Sbjct: 68 DTAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVDRWLKELRDHTD------ 116 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R + ++ Sbjct: 117 ----------------------------SSIVIMLVGNKADLGH-----LRAVSTEDAKA 143 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPF-----RSHVVDFNEPLCIWFG 286 A + S + + + + + V + + + G Sbjct: 144 YAEKESTFFIETSALESTNVENAFTEVLTQIYHVVSRKALETGDEAATVPKGQTINV--G 201 Query: 287 TDSWSKIGD 295 D S I Sbjct: 202 KDDVSAIKI 210 >gi|157341762|emb|CAO62317.1| unnamed protein product [Vitis vinifera] Length = 203 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 24/214 (11%), Positives = 63/214 (29%), Gaps = 46/214 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNQEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDVTDQESF-NNVKQWLNEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + + Sbjct: 115 NKL----------------------------------LVGNKCDLTAN-----KVVSYET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 ++ A IG + S K + + Sbjct: 136 AKAFADEIGIPFMETSAKNATNVEQAFMAMAADI 169 >gi|67536988|ref|XP_662268.1| hypothetical protein AN4664.2 [Aspergillus nidulans FGSC A4] gi|40741516|gb|EAA60706.1| hypothetical protein AN4664.2 [Aspergillus nidulans FGSC A4] Length = 522 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 63/399 (15%), Positives = 128/399 (32%), Gaps = 67/399 (16%) Query: 22 TEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLG----------------- 64 + S+T S +D + P E+ +L+LG Sbjct: 2 STSKRSSTVSSKDGLKKNIWSSMLDSAATGKRLP-EKNLLILGATALLSFGSSLTPPCLG 60 Query: 65 -------------SKCVGKTTAIN--KFFDREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 S ++ N + + AL Y++ + + + + Sbjct: 61 GTPESQREFLEAYSADTLDSSLSNEKRKGKGKVPPVANQFALGYTYLDVLDADQEDTLAR 120 Query: 110 V--WELGSL-DNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLR----- 161 V + L + LL+ + + + +V+++LD S P + L + LR Sbjct: 121 VSAYLLSEPSLSFAPLLKPLLTPQSIPETSVVILLDWSDPWTWVRRLREWVRLLRHVLVS 180 Query: 162 --DTAQQMMEKVTPELREILEQRTVERVGQQN--------KDSEKLDPLPFPVIIVGGKY 211 D + +ME+ + RE + G Q E + L P+ +V Sbjct: 181 LDDETKVVMEENMTQWRERKKGIDTSSTGSQATSSGSAIIGPGEWDEGLGVPLCVVCQGT 240 Query: 212 DVFSGFDPII------RKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGS 265 D + + +R++ G +L++ + LG S Sbjct: 241 DKMEKLERDHGWSEDEFDFIHQFMRTLLVKHGASLIYTKPFHANNLHSV--LHSSLGIHS 298 Query: 266 --PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQKL 322 +++ ++ ++ + I DSW+KI ++E I + +E+ Q E L Sbjct: 299 LLKKLSLKANFIERDK-ILIPTNWDSWAKIRVIREGSNLEGISTAWSIEI-QDPPEP--L 354 Query: 323 KETTDPAKDPGFKELVI-DEIRSQKNEELAGLMRDVLLR 360 + D A+D G E + + R+ L Sbjct: 355 SDRNDEAQDDGSSEEDDGTSAVKIYEQTIKDPKRNTSLS 393 >gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus] Length = 253 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 26/218 (11%), Positives = 63/218 (28%), Gaps = 46/218 (21%) Query: 46 LRQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKS 104 +L++G VGK+ + +F D + T+ +++ G Sbjct: 48 DMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-K 106 Query: 105 PQVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTA 164 + W+ + + R +I++ D++ + F +++ + + A Sbjct: 107 TIKLQRWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYA 161 Query: 165 QQMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKH 224 + + K+ +VG K D+ + + Sbjct: 162 SENVNKL----------------------------------LVGNKCDLTT-----KKVV 182 Query: 225 TCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 183 DYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 220 >gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus] Length = 203 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 26/226 (11%), Positives = 64/226 (28%), Gaps = 46/226 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFGDDSYIESYISTIGVDFKIRTVE-QDAKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDVTDEESF-NNVKQWLSEIDRYASDNV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + R + Sbjct: 115 NKL----------------------------------LVGNKCDLTAN-----RAVSYDT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 + A IG + S K + + A ++ Sbjct: 136 AKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANN 181 >gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus] Length = 203 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 68/239 (28%), Gaps = 47/239 (19%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTV-DLDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D + + F +L+ + + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDCTDLESF-NNLKQWLEEVDRYACENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D + + Sbjct: 115 NKL----------------------------------LVGNKCD-----EVTKKVVDYTT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 + A + L S K + T+ P + V + + + I G Sbjct: 136 AKEYADQLNIPFLETSAKNATNVEQAFMTMASEIKNRVGPPSSAAVTESAK-VKIDQGR 193 >gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa] Length = 215 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 26/237 (10%), Positives = 69/237 (29%), Gaps = 49/237 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ Sbjct: 7 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDD-KIVKAQ 65 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ F ++E K LRD Sbjct: 66 IWDTAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTDA--- 117 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 ++ VG K D+ +R + Sbjct: 118 -------------------------------NIVIMFVGNKADLRH-----LRAVSTEDA 141 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFG 286 ++ A + S + + + + + ++P + G Sbjct: 142 KAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSRK---ALDIGDDPAALPKG 195 >gi|15222396|ref|NP_172221.1| AtRABA2b (Arabidopsis Rab GTPase homolog A2b); GTP binding [Arabidopsis thaliana] Length = 214 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 69/223 (30%), Gaps = 46/223 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 I+++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEG-KTVKAQIW 66 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ Q F ++ + LRD A Sbjct: 67 DTAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-ENVLRWLRELRDHAD------ 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++ G K D+ +R RS Sbjct: 116 ----------------------------SNIVIMMAGNKSDLNH-----LRSVADEDGRS 142 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 +A G + L S + TI + + + Sbjct: 143 LAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALAAQ 185 >gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis] Length = 203 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 25/226 (11%), Positives = 63/226 (27%), Gaps = 46/226 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE-QDGKTMKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ F +++ + A + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDVTDQDSF-NNVKQWLNEIDRYASDNV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKCDL-----TDKKVVSYET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 ++ A IG + S K + + A ++ Sbjct: 136 AKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANN 181 >gi|15217622|ref|NP_171715.1| ATRAB1B (Arabidopsis thaliana responsive to abscisic acid 1B); GTP binding gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana] gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana] Length = 203 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 26/226 (11%), Positives = 64/226 (28%), Gaps = 47/226 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDVTDEESF-NNVKQWLSEIDRYASDNV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ R Sbjct: 115 NKL----------------------------------LVGNKSDL-----TENRAIPYET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGF-GSPAHPFRSH 273 ++ A IG + S K + + + P ++ Sbjct: 136 AKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNN 181 >gi|206553|gb|AAA42006.1| ras protein Length = 205 Score = 220 bits (562), Expect = 9e-56, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 65/217 (29%), Gaps = 46/217 (21%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSP 105 +L++G VGK+ + +F D + T+ +++ G Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + R +I++ D++ + F +++ + + A Sbjct: 60 IKLQIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 + + K+ +VG K D+ + + Sbjct: 115 ENVNKL----------------------------------LVGNKCDLTT-----KKVVD 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K K + T+ Sbjct: 136 YTTAKEFADSLGIPFLETSAKNEKNVEQSFMTMAAEI 172 >gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum] gi|738941|prf||2001457J GTP-binding protein Length = 203 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 26/226 (11%), Positives = 64/226 (28%), Gaps = 46/226 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDVTDEESF-NNVKQWLSEIDRYASDNV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + R + Sbjct: 115 NKL----------------------------------LVGNKSDLTAN-----RVVSYDT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 + A IG + S K + + A ++ Sbjct: 136 AKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANN 181 >gi|39971217|ref|XP_366999.1| hypothetical protein MGG_03075 [Magnaporthe grisea 70-15] gi|149210811|ref|XP_001522780.1| hypothetical protein MGCH7_ch7g878 [Magnaporthe grisea 70-15] gi|86196833|gb|EAQ71471.1| hypothetical protein MGCH7_ch7g878 [Magnaporthe grisea 70-15] gi|145017071|gb|EDK01434.1| hypothetical protein MGG_03075 [Magnaporthe grisea 70-15] Length = 561 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 119/389 (30%), Gaps = 58/389 (14%) Query: 10 LHQRLQKMFVKRTEGGESATPSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVG 69 + +D+ + E P E+ +LVLG Sbjct: 2 AANTNRFSTYTTASADSKDGEKKKDMWNSMLES-----VASGKRLP-EKNLLVLGGTVET 55 Query: 70 KTTAI-------NKFFDREE-HATRPTLALEYSFGRRIGSGKSPQVMNV---WELGSLDN 118 + + + + D + AL ++ + + + + + + Sbjct: 56 QRSFLETLSSDFRRTLDTDHIPPVANHFALGNTYYDVLDADQEDILARITLYSLTKPSAS 115 Query: 119 AEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDT-------AQQMMEKV 171 LL+ + + V+++LD S P + L LR A+ ME+V Sbjct: 116 FSSLLKPLLTPQTIPNTLVVILLDWSHPWLWMRQLRDWILLLRTVLVSLSIEAKDAMEEV 175 Query: 172 TPELREILE-------------QRTVERVGQQNKDSEKL--------DPLPFPVIIVGGK 210 R+ + G DS L D L P+ +V Sbjct: 176 MIGWRDRGRGGASTNLDGSGVATAAMASDGGAGSDSVALPLGPGEWEDALGLPLSVVCQN 235 Query: 211 YDVFSGFDP------IIRKHTCRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFG 264 D + + +R++ G +L++ S +P L LG Sbjct: 236 ADKIDSLEKRQGWKEEQFDVVMQFMRTVLLKHGASLIYTSTSVPSQLPSL--IHSSLGIT 293 Query: 265 S--PAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ-SVERIGATFGMEVPQLQLEKQK 321 S P + +V+D ++ + + DSW KI VE + + +++ Q + Sbjct: 294 SLLKRQPLKHNVIDRDK-IVVPPNWDSWGKIRVLRDGFDVEMVSEGWSIDLDQPFPRESA 352 Query: 322 LKETTDPAKDPG-FKELVIDEIRSQKNEE 349 D + G F + D+ Q ++ Sbjct: 353 RTLNGDGLNEAGEFSDSESDDGARQSEDD 381 >gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus] Length = 205 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 64/217 (29%), Gaps = 46/217 (21%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSP 105 +L++G VGK+ + +F D + T+ +++ G Sbjct: 1 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + R +I++ D++ + F +++ + + A Sbjct: 60 IKLQIWDTAGEERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 + + K+ +VG K D+ + + Sbjct: 115 ENVNKL----------------------------------LVGNKCDLTT-----KKVVD 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 136 YTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172 >gi|15230422|ref|NP_187823.1| AtRABA4d (Arabidopsis Rab GTPase homolog A4d); GTP binding [Arabidopsis thaliana] gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana] gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana] gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana] Length = 222 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 32/257 (12%), Positives = 71/257 (27%), Gaps = 55/257 (21%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGKT + +F + ++ T+ +E+ Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTL-VIDNKTVKAQ 67 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ Q F + + LR A + Sbjct: 68 IWDTAGQERYRAVTSAYYR----GAVGAMLVYDMTKRQSFDH-MAKWLEELRGHADK--- 119 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 ++++G K D+ S +R Sbjct: 120 -------------------------------NIVIMLIGNKCDLGS-----LRAVPTEDA 143 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 + A + S + TI + + + D + G S Sbjct: 144 QEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDDAD------GNSS 197 Query: 290 WSK---IGDTGAQSVER 303 K I Q + Sbjct: 198 LLKGTRIIIPSEQESGK 214 >gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus] Length = 218 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 30/258 (11%), Positives = 75/258 (29%), Gaps = 53/258 (20%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ +++F + ++ T+ +E++ G Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQ 63 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ + ++E K LRD A Sbjct: 64 IWDTAGQERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD---- 114 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKH-TCRC 228 +++VG K D+ +R Sbjct: 115 ------------------------------SNIVILLVGNKSDLRH-----LRAVCPLTE 139 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTD 288 R+ A + + S + I + + + +E G + Sbjct: 140 ARAFAERH-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDES----PG-N 193 Query: 289 SWSKIGDTGAQSVERIGA 306 + I ++ Sbjct: 194 NVVDISVPPTTDGQKPNK 211 >gi|154318598|ref|XP_001558617.1| GTP-binding protein ypt1 [Botryotinia fuckeliana B05.10] gi|150857818|gb|EDN33010.1| GTP-binding protein ypt1 [Botryotinia fuckeliana B05.10] Length = 201 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 26/228 (11%), Positives = 63/228 (27%), Gaps = 49/228 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ G + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTVKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R + ++ D++ F +++ + + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGICVVYDVTDMDSF-NNVKQWLQEIDRYATEGV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D + Sbjct: 115 NKL----------------------------------LVGNKSD-----MSDKKVVDYTV 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG---FGSPAHPFRSH 273 + A +G L S K + T+ G+ + Sbjct: 136 AKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERIGTTTANNKPA 183 >gi|147777473|emb|CAN62732.1| hypothetical protein [Vitis vinifera] gi|157337221|emb|CAO21567.1| unnamed protein product [Vitis vinifera] Length = 217 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 28/218 (12%), Positives = 68/218 (31%), Gaps = 46/218 (21%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 I+++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDG-KTVKAQIW 66 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ Q F +++ + LRD A Sbjct: 67 DTAGQERYRAITSAYYR----GAVGALLVYDITKRQTF-DNVQRWLRELRDHAD------ 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++ G K D+ +R + + Sbjct: 116 ----------------------------SNIVIMMAGNKCDL-----KHLRAVSEEDGQG 142 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHP 269 +A + L S + TI + + Sbjct: 143 LAEREELSFLETSALEATNIEKAFQTILTEIYHIISKK 180 >gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51] gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51] Length = 203 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 26/239 (10%), Positives = 65/239 (27%), Gaps = 48/239 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ G + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTVKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R + ++ D++ F +++ + + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGICVVYDVTDMDSF-NNVKQWLQEIDRYATEGV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D + Sbjct: 115 NKL----------------------------------LVGNKSD-----MADKKVVEYTV 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 + A +G L S K + T+ ++ + + G Sbjct: 136 AKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNNT--KANVNVAPGQ 192 >gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum] Length = 203 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 65/226 (28%), Gaps = 46/226 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + Sbjct: 60 RIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLSEIDRYASDNV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + R + Sbjct: 115 NKI----------------------------------LVGNKADLTAN-----RVVSYET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHV 274 ++ A IG L S K + + A S+ Sbjct: 136 AKAFADEIGIPFLETSAKDATNVEQAFMAMTGAIKNRMASQPASNS 181 >gi|146097038|ref|XP_001468017.1| dynein light intermediate chain [Leishmania infantum JPCM5] gi|134072383|emb|CAM71091.1| dynein light intermediate chain, putative [Leishmania infantum] Length = 424 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 78/379 (20%), Positives = 149/379 (39%), Gaps = 43/379 (11%) Query: 12 QRLQKMFVKRTEGGESAT--PSIQDIAGRLAEEQQRLRQLEATTTPKERTILVLGSKCVG 69 Q L + G ++ +D+ + +A E +++++G+ G Sbjct: 48 QELSETPTTAATGTSASIVIDPTKDLWQNI-----TRNIKDANVEQTETSLVMVGASGSG 102 Query: 70 KTTAINKFFDREEHA--------TRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNAEQ 121 KTT +++ + + + + T AL+YSF RR +P + WE+ Q Sbjct: 103 KTTLLHRIYTSFQSSSSGSGPKRVKATTALDYSFARRSERNVAPV-AHFWEIAQGTQFSQ 161 Query: 122 LLEVPMRTHGLQQLAVILMLDLSQ---PQRFWTDLECAYKGLRDTAQQMMEKVTPE---L 175 LL++ + + +A +++D S+ P W + L + +++ + Sbjct: 162 LLDIVLTPENVHAVAAAVVVDASEEGLPVS-WETATYWLRRLDQRVSDISQRMKAKGSTT 220 Query: 176 REILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHL 235 + R + +G + D +++ P ++V K D F G D K CR +R +AHL Sbjct: 221 PAKILTRAQKAIGLDHPDLKRMRLSGIPTVLVVNKIDAFRG-DMQQLKLLCRSMRYLAHL 279 Query: 236 IGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGD 295 G ++F S++ + L + F +P P + + DS+ IGD Sbjct: 280 YGAHVVFTSEQESVRWRAL---MNFTLFQAPFDPKYLQTDPERSAVLLTVDRDSFLDIGD 336 Query: 296 T-----------GAQSVERIGATFGMEVPQLQLEKQKLKE-----TTDPAKDPGFKELVI 339 G ++R A F P +L + K+ + + GF + VI Sbjct: 337 PDVSRLGGSVSTGDAELDRWKAPFDEAFPPKKLNEDKVMDDPFIRRLYDTAEGGFGDPVI 396 Query: 340 DEIRSQKNEELAGLMRDVL 358 D +R QK+EEL + Sbjct: 397 DALRKQKDEELEQYRKKSS 415 >gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori] gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori] Length = 213 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 31/261 (11%), Positives = 76/261 (29%), Gaps = 69/261 (26%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK++ +++F + ++ T+ +E++ G +W Sbjct: 7 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG-KTIKAQIW 65 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ + ++E + LRD A Q Sbjct: 66 DTAGQERYRAITSAYYR----GAVGALLVYDIAKHLS-YENVERWLRELRDHADQ----- 115 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R ++ Sbjct: 116 -----------------------------NILIMLVGNKSDLRH-----LRSIPTEEAKA 141 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWS 291 A G + + S + I + + Sbjct: 142 FAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQR---------------------- 179 Query: 292 KIGDTGAQSVERIGATFGMEV 312 ++ D V R +V Sbjct: 180 QMRDPPEGDVIR-PDAEPADV 199 >gi|68402952|ref|XP_695291.1| PREDICTED: similar to Rab1-prov protein [Danio rerio] Length = 201 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 30/243 (12%), Positives = 74/243 (30%), Gaps = 51/243 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ G + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKCDLTT-----KKVVDYTA 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG-----FGSPAHPFRSHVVDFNEPLCI 283 + A + L S K + T+ G+ A +S++ + P+ Sbjct: 136 AKEFADSLSIPFLETSAKSSTNVEQAFMTMAAEIKKRMGPGATAGAEKSNLKIHSTPVKT 195 Query: 284 WFG 286 G Sbjct: 196 SSG 198 >gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum] gi|738940|prf||2001457H GTP-binding protein Length = 202 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 28/243 (11%), Positives = 70/243 (28%), Gaps = 51/243 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVE-QDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLNEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKSDLA-----DNKVVSSET 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSH-----VVDFNEPLCI 283 ++ A IG + S K + + A ++ V +P+ Sbjct: 136 AKAFADEIGIPFMETSAKNANNVEQAFMAMAAEIKNRMASQPSNNARPPTVQIRGQPVNQ 195 Query: 284 WFG 286 G Sbjct: 196 KSG 198 >gi|91087113|ref|XP_975150.1| PREDICTED: similar to CG3320-PA, isoform A [Tribolium castaneum] Length = 202 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 29/239 (12%), Positives = 66/239 (27%), Gaps = 48/239 (20%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTI-DLDGKTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D + F +++ + + A + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDCTDQDSF-NNVKQWLEEIDRYACDNV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKSDLTT-----KKVVDYTT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 + A +G L S K + T+ P + D + I G Sbjct: 136 AKEYADQLGIPFLETSAKNASNVEQAFMTMAAEIKNRVGPPSSAA--DQASKVKIDQGR 192 >gi|15233873|ref|NP_193578.1| AtRABA1e (Arabidopsis Rab GTPase homolog A1e); GTP binding [Arabidopsis thaliana] gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis thaliana] gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis thaliana] gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana] gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana] Length = 217 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 69/236 (29%), Gaps = 49/236 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ +W Sbjct: 9 DYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDE-KIIKAQLW 67 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ F ++E K LRD Sbjct: 68 DTAGQERYRAITSAYYR----GAVGALLVYDITRHITF-ENVERWLKELRDHTDA----- 117 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R RS Sbjct: 118 -----------------------------NVVIMLVGNKADLRH-----LRAVPTEEARS 143 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGT 287 + + S + + + + + +P+ + G Sbjct: 144 FSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRK---ALDGTGDPMSLPKGQ 196 >gi|464524|sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis] Length = 205 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 26/217 (11%), Positives = 64/217 (29%), Gaps = 46/217 (21%) Query: 47 RQLEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSP 105 +L++G VGK+ + +F D + T+ +++ G Sbjct: 1 MSTMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KT 59 Query: 106 QVMNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQ 165 + +W+ + + R +I++ D++ + F +++ + + A Sbjct: 60 IKLQIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYAS 114 Query: 166 QMMEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHT 225 + + K+ +VG K D+ + + Sbjct: 115 ENVNKL----------------------------------LVGNKSDLTT-----KKVVD 135 Query: 226 CRCLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 136 FTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEI 172 >gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis] Length = 247 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 27/214 (12%), Positives = 65/214 (30%), Gaps = 46/214 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ G + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + F +++ + + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKCDLTT-----KKVVDYTT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 +S A +G L S K + T+ Sbjct: 136 AKSFADNLGIPFLETSAKSSTNVEQAFMTMAAEI 169 >gi|41055496|ref|NP_957436.1| hypothetical protein LOC394117 [Danio rerio] gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio] Length = 201 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 71/238 (29%), Gaps = 51/238 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ G + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + + +++ + + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQES-YNNVKQWLQEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKCDLTT-----KKVVDYTT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG-----FGSPAHPFRSHVVDFNEPL 281 + A + L S K + T+ G+ + ++ + P+ Sbjct: 136 AKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATTGGDKPNLKIESTPV 193 >gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase Rab1a Length = 175 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 63/214 (29%), Gaps = 46/214 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ + Sbjct: 2 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLE-NKTVKL 60 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ F +++ + + A + + Sbjct: 61 QIWDTAGQERFRTITSSYYR----GAHGIIIVYDVTDRDSF-DNVKQWIQEIDRYAMENV 115 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ S R T Sbjct: 116 NKL----------------------------------LVGNKCDLVS-----KRVVTSDE 136 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 R +A G + S K + T+ Sbjct: 137 GRELADSHGIKFIETSAKNAYNVEQAFHTMAGEI 170 >gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp Length = 191 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 26/215 (12%), Positives = 65/215 (30%), Gaps = 46/215 (21%) Query: 49 LEATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQV 107 + +L++G VGK+ + +F D + T+ +++ G Sbjct: 17 RGSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIK 75 Query: 108 MNVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQM 167 + +W+ + + R +I++ D++ + F +++ + + A + Sbjct: 76 LQIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYASEN 130 Query: 168 MEKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCR 227 + K+ +VG K D+ + + Sbjct: 131 VNKL----------------------------------LVGNKCDLTT-----KKVVDYT 151 Query: 228 CLRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 + A +G L S K + T+ Sbjct: 152 TAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 186 >gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio] Length = 201 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 27/238 (11%), Positives = 69/238 (28%), Gaps = 51/238 (21%) Query: 50 EATTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVM 108 +L++G VGK+ + +F D + T+ +++ G + Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDG-KTIKL 59 Query: 109 NVWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMM 168 +W+ + + R +I++ D++ + + +++ K + A + + Sbjct: 60 QIWDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQES-YNNVKQWLKEIDRYASENV 114 Query: 169 EKVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRC 228 K+ +VG K D+ + + Sbjct: 115 NKL----------------------------------LVGNKCDLTT-----KKVVDYTT 135 Query: 229 LRSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAH-----PFRSHVVDFNEPL 281 + A +G L S K + T+ + + + P+ Sbjct: 136 AKEFADSLGIPFLETSAKNATNVEQAFMTMAEEIKKRMRPGASGGSEKPDLKIESTPV 193 >gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab- Binding Domain gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab- Binding Domain Length = 167 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 67/212 (31%), Gaps = 46/212 (21%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 ++++G VGK+ +++F + ++ T+ +E++ G +W Sbjct: 1 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIW 59 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + L+ + R + +L+ D+++ + ++E K LRD A Sbjct: 60 DTAGLERYRAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHAD------ 108 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 + +VG K D+ +R R+ Sbjct: 109 ----------------------------SNIVIXLVGNKSDLRH-----LRAVPTDEARA 135 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGF 263 A G + + S + TI + Sbjct: 136 FAEKNGLSFIETSALDSTNVEAAFQTILTEIY 167 >gi|15218719|ref|NP_174177.1| AtRABA1i (Arabidopsis Rab GTPase homolog A1i); GTP binding [Arabidopsis thaliana] gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana] gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana] Length = 218 Score = 218 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 65/230 (28%), Gaps = 46/230 (20%) Query: 53 TTPKERTILVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVW 111 +++ G VGK+ +++F + H +R T+ +E++ +W Sbjct: 9 DYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDD-KIVKAQIW 67 Query: 112 ELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKV 171 + + + R + +L+ D+++ F ++E K LRD Sbjct: 68 DTAGQERYRAITSAYYR----GAVGALLVYDVTRHVTF-ENVERWLKELRDHTDA----- 117 Query: 172 TPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRS 231 +++VG K D+ +R + ++ Sbjct: 118 -----------------------------NIVIMLVGNKADLRH-----LRAISTEEAKA 143 Query: 232 MAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPL 281 A + S + + + D L Sbjct: 144 FAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSKKALEAGDDPTTAL 193 >gi|94733945|emb|CAK04342.1| novel protein (zgc:55760) [Danio rerio] Length = 205 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 30/241 (12%), Positives = 70/241 (29%), Gaps = 51/241 (21%) Query: 61 LVLGSKCVGKTTAINKFF-DREEHATRPTLALEYSFGRRIGSGKSPQVMNVWELGSLDNA 119 +++G VGK+ +++F + ++ T+ +E++ G +W+ + Sbjct: 2 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDG-KTIKAQIWDTAGQERY 60 Query: 120 EQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEKVTPELREIL 179 + R + +L+ D+++ + ++E K LRD A Sbjct: 61 RAITSAYYR----GAVGALLVYDIAKHLT-YENVERWLKELRDHADN------------- 102 Query: 180 EQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLRSMAHLIGGA 239 +++VG K D+ +R R+ A + Sbjct: 103 ---------------------NIVIMLVGNKSDLRH-----LRAVPTDEARAFAEKNNLS 136 Query: 240 LLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDSWSKIGDTGAQ 299 + S + I + + +VD + I Sbjct: 137 FIETSALDSTNVEEAFKNILTEIYRIVSQK---QMVDRPGHDESPGN--NVVDISVPPTT 191 Query: 300 S 300 Sbjct: 192 D 192 >gi|114577812|ref|XP_530454.2| PREDICTED: hypothetical protein [Pan troglodytes] Length = 211 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 65/212 (30%), Gaps = 46/212 (21%) Query: 52 TTTPKERTILVLGSKCVGKTTAINKFFD-REEHATRPTLALEYSFGRRIGSGKSPQVMNV 110 + +L++G VGK+ + +F D + T+ +++ G + + Sbjct: 12 SEFDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG-KTIKLQI 70 Query: 111 WELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMMEK 170 W+ + + R +I++ D++ + F +++ + + A + + K Sbjct: 71 WDTAGQERFRTITSSYYR----GAHGIIVVYDVTDQESF-NNVKQWLQEIDRYASENVNK 125 Query: 171 VTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCLR 230 + +VG K D+ + + + Sbjct: 126 L----------------------------------LVGNKCDLTT-----KKVVDYTTAK 146 Query: 231 SMAHLIGGALLFYSQKMPKLAKVLRDTICHLG 262 A +G L S K + T+ Sbjct: 147 EFADSLGIPFLETSAKNATNVEQSFMTMAAEI 178 >gi|3024500|sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus] Length = 226 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 31/250 (12%), Positives = 71/250 (28%), Gaps = 49/250 (19%) Query: 51 ATTTPKERTILVLGSKCVGKTTAINKF-FDREEHATRPTLALEYSFGRRIGSGKSPQVMN 109 ++++G VGK+ + +F + ++ T+ +E+ Sbjct: 11 NAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTL-VIDHKTVKAQ 69 Query: 110 VWELGSLDNAEQLLEVPMRTHGLQQLAVILMLDLSQPQRFWTDLECAYKGLRDTAQQMME 169 +W+ + + R + +L+ D+++ Q F + + LR+ A + Sbjct: 70 IWDTAGQERYRAVTSAYYR----GAVGAMLVYDITKRQTFDH-IPRWLEELRNHADK--- 121 Query: 170 KVTPELREILEQRTVERVGQQNKDSEKLDPLPFPVIIVGGKYDVFSGFDPIIRKHTCRCL 229 +I++G K D+ + R Sbjct: 122 -------------------------------NIVIILIGNKCDLVN-----QRDVPTEDA 145 Query: 230 RSMAHLIGGALLFYSQKMPKLAKVLRDTICHLGFGSPAHPFRSHVVDFNEPLCIWFGTDS 289 + A G L S + T+ + + D ++ + S Sbjct: 146 KEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAA--DESQG-NGNSASLS 202 Query: 290 WSKIGDTGAQ 299 KI G Sbjct: 203 GQKIIIPGPA 212 Database: /data/curated/sequences/fasta/proteomes/nr_So.fa Posted date: Dec 27, 2007 11:11 AM Number of letters in database: 1,979,780,658 Number of sequences in database: 5,742,111 Lambda K H 0.311 0.167 0.448 Lambda K H 0.267 0.0513 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,797,908,731 Number of Sequences: 5742111 Number of extensions: 366636611 Number of successful extensions: 1837427 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 17480 Number of HSP's successfully gapped in prelim test: 19162 Number of HSP's that attempted gapping in prelim test: 1732394 Number of HSP's gapped (non-prelim): 58572 length of query: 368 length of database: 1,979,780,658 effective HSP length: 134 effective length of query: 234 effective length of database: 1,210,337,784 effective search space: 283219041456 effective search space used: 283219041456 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 80 (35.1 bits)