BLASTP 2.1.1 [Aug-8-2000]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SC_sp|P36160
         (344 letters)

Database: nr
           618,844 sequences; 195,544,254 total letters

Searching..................................................

E-value threshold for inclusion in PSI-Blast iteration 1: 0.002 
E-value threshold for inclusion in PSI-Blast iteration 2:


Distribution of 11 Blast Hits on the Query Sequence




Sequences with E-value BETTER than threshold
Score E Sequences producing significant alignments: (bits) Value ref|NP_013007.1| Ykr081cp [Saccharomyces cerevisiae] >gi|5496... 639 0.0 pir||T39206 hypothetical protein SPAC926.08c - fission yeast ... 297 1e-79 dbj|BAA95117.1| (AB041810) unnamed protein product [Mus muscu... 231 9e-60 gb|AAF55514.1| (AE003721) CG7993 gene product [Drosophila mel... 199 5e-50 dbj|BAB14983.1| (AK024740) unnamed protein product [Homo sapi... 194 2e-48 emb|CAC11120.1| (AL357374) bA353C18.4 (novel protein) [Homo s... 190 2e-47 gb|AAF60765.1| (AC024810) contains similarity to Saccharomyce... 187 2e-46 dbj|BAB02781.1| (AB023036) emb|CAB54156.1~gene_id:MDB19.11~si... 157 2e-37 dbj|BAA87188.1| (AB027884) Hypothetical nuclear protein [Schi... 147 2e-34
Sequences with E-value WORSE than threshold
emb|CAB62866.1| (AL035475) hypothetical protein, MAL4P2.25 [P... 37 0.30 pir||B82940 conserved hypothetical membrane lipoprotein UU045... 33 5.9
Alignments
>ref|NP_013007.1| Ykr081cp [Saccharomyces cerevisiae]
 sp|P36160|YK61_YEAST HYPOTHETICAL 39.6 KDA PROTEIN IN MTD1-NUP133 INTERGENIC REGION
 pir||S38159 hypothetical protein YKR081c - yeast (Saccharomyces cerevisiae)
 emb|CAA81632.1| (Z27116) ORF YKR401 [Saccharomyces cerevisiae]
 emb|CAA82160.1| (Z28306) ORF YKR081c [Saccharomyces cerevisiae]
          Length = 344

 Score =  639 bits (1630), Expect = 0.0
 Identities = 320/344 (93%), Positives = 320/344 (93%)

Query: 1   MIRTVKPKNARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRF 60
           MIRTVKPKNARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRF
Sbjct: 1   MIRTVKPKNARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRF 60

Query: 61  NRKNDIHPFEDMSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELMVAD 120
           NRKNDIHPFEDMSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELMVAD
Sbjct: 61  NRKNDIHPFEDMSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELMVAD 120

Query: 121 NFKLLSDFKKLTFTVGLKPMFTFQGAAFDTHPVYKQIKSLFLDFFRGESTDLQDVAGLQH 180
           NFKLLSDFKKLTFTVGLKPMFTFQGAAFDTHPVYKQIKSLFLDFFRGESTDLQDVAGLQH
Sbjct: 121 NFKLLSDFKKLTFTVGLKPMFTFQGAAFDTHPVYKQIKSLFLDFFRGESTDLQDVAGLQH 180

Query: 181 VISMTIQGDFQDGEPLPNVLFRVYKLKSYKSDQGGKRLPRIELVEIGPRLDFKIGRIHTP 240
           VISMTIQGDFQDGEPLPNVLFRVYKLKSYKSDQGGKRLPRIELVEIGPRLDFKIGRIHTP
Sbjct: 181 VISMTIQGDFQDGEPLPNVLFRVYKLKSYKSDQGGKRLPRIELVEIGPRLDFKIGRIHTP 240

Query: 241 SPDMVTEAHKKPKQLEMKTKKNVELDIMGDKLGRIHMGKQDLGKLQTRKMKGLKSKFXXX 300
           SPDMVTEAHKKPKQLEMKTKKNVELDIMGDKLGRIHMGKQDLGKLQTRKMKGLKSKF   
Sbjct: 241 SPDMVTEAHKKPKQLEMKTKKNVELDIMGDKLGRIHMGKQDLGKLQTRKMKGLKSKFDQG 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXGQEYEEEFVSATDIEPSAKRQKK 344
                                GQEYEEEFVSATDIEPSAKRQKK
Sbjct: 301 TEEGDGEVDEDYEDEASYSDDGQEYEEEFVSATDIEPSAKRQKK 344
>pir||T39206 hypothetical protein SPAC926.08c - fission yeast
           (Schizosaccharomyces pombe)
 emb|CAB54156.1| (AL110469) hypothetical protein [Schizosaccharomyces pombe]
          Length = 317

 Score =  297 bits (753), Expect = 1e-79
 Identities = 156/295 (52%), Positives = 200/295 (66%), Gaps = 5/295 (1%)

Query: 1   MIRTVKPKNARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRF 60
           M+R VKPKNAR KRAL KRE KLVE  K A+F+ G + ++   D++ D+ ALKKP    F
Sbjct: 1   MLRQVKPKNARTKRALEKREPKLVEGAKTAIFLRGNATSQISLDVLGDIHALKKPFSVNF 60

Query: 61  NRKNDIHPFEDMSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELMVAD 120
            +KN+I PFED S LEFFSEKND +L V+ T +KKR +N+T++R F Y++ DMIEL +  
Sbjct: 61  QKKNNILPFEDASSLEFFSEKNDAALAVMATHNKKRPHNLTWVRFFNYRVLDMIELGIV- 119

Query: 121 NFKLLSDFKKLTFTVGLKPMFTFQGAAFDTHPVYKQIKSLFLDFFRGESTDLQDVAGLQH 180
           N+K +  F       G KPM  FQG  FD HP Y+ IKSLFLDFFRGE     D AGL +
Sbjct: 120 NYKSIQSFSATPIVPGTKPMILFQGPVFDAHPTYRHIKSLFLDFFRGEPIQKLDSAGLSY 179

Query: 181 VISMT-IQGDFQDGEPLPNVLFRVYKLKSYKSDQGGKRLPRIELVEIGPRLDFKIGRIHT 239
           VI ++  +    + +PLP V FRVY  K  K+      LPR+EL E+GPR+DF I R+  
Sbjct: 180 VIVVSAAEAQEDETKPLPLVHFRVYGTKLLKTK---TNLPRVELEEMGPRIDFNIRRVQP 236

Query: 240 PSPDMVTEAHKKPKQLEMKTKKNVELDIMGDKLGRIHMGKQDLGKLQTRKMKGLK 294
              D++ EA KKPK  E K KKNV++DI+G+K+GRIH+ +QDLG LQTRKMKGLK
Sbjct: 237 AESDVLEEALKKPKTQEPKPKKNVDVDIIGNKVGRIHVDQQDLGNLQTRKMKGLK 291
>dbj|BAA95117.1| (AB041810) unnamed protein product [Mus musculus]
          Length = 306

 Score =  231 bits (583), Expect = 9e-60
 Identities = 131/291 (45%), Positives = 170/291 (58%), Gaps = 12/291 (4%)

Query: 6   KPKNARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRFNRKND 65
           KPK  RAKR L KRE KL EN+K A+ I G + N  +  ++ D+ ALKKP    + +KN 
Sbjct: 9   KPKTKRAKRFLEKREPKLTENIKNAMLIKGGNANATVTQVLRDMYALKKPYGVLYKKKNI 68

Query: 66  IHPFEDMSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELMVADNFKLL 125
             PFED + LEFFS+K+DCSL +  + +KKR NN+   R + Y + DMIEL + + F  L
Sbjct: 69  TRPFEDQTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGI-EKFVSL 127

Query: 126 SDFKKLTFTVGLKPMFTFQGAAFDTHPVYKQIKSLFLDFFRGESTDLQDVAGLQHVISMT 185
            D K      G KPM  F G  FD    ++++K+L +DFFRG +     +AGL++V+  T
Sbjct: 128 KDIKTSKCPEGTKPMLIFAGDDFDVTEDFRRLKNLLIDFFRGPTVSNVRLAGLEYVLHFT 187

Query: 186 IQGDFQDGEPLPNVLFRVYKLKSYKSDQGGKRLPRIELVEIGPRLDFKIGRIHTPSPDMV 245
                        V FR YKL   KS   G R PRIEL E+GP LD  + R H  S D+ 
Sbjct: 188 ALNG--------KVYFRSYKLLLKKS---GCRTPRIELEEMGPSLDLVMRRTHLASDDLY 236

Query: 246 TEAHKKPKQLEMKTKKNVELDIMGDKLGRIHMGKQDLGKLQTRKMKGLKSK 296
             + K PK L+ K +KN+  D  G   GRIHM KQDL KLQTRKMKGLK +
Sbjct: 237 KLSMKVPKALKPKKRKNISQDTFGTTFGRIHMQKQDLSKLQTRKMKGLKKR 287
>gb|AAF55514.1| (AE003721) CG7993 gene product [Drosophila melanogaster]
          Length = 289

 Score =  199 bits (500), Expect = 5e-50
 Identities = 107/264 (40%), Positives = 157/264 (58%), Gaps = 11/264 (4%)

Query: 31  LFIPGQSCNKNLHDIMVDLSALKKPDMKRFNRKNDIHPFEDMSPLEFFSEKNDCSLMVLM 90
           LF+ G+ C  N+   M DL ALKKP +K  NRKNDI PF+D S LEF + KND +L    
Sbjct: 2   LFLDGRKCGGNVKLCMKDLQALKKPLVKVLNRKNDITPFDDPSSLEFLTMKNDAALFTFG 61

Query: 91  TSSKKRKNNMTFIRTFGYKIYDMIELMVADNFKLLSDFKKLTFTVGLKPMFTFQGAAFDT 150
           ++SKKR +N+   R F  ++ DM EL +   ++ +S+FK       +KP   F G  +  
Sbjct: 62  STSKKRPDNIILGRIFENEVLDMFELGIK-RYQAISEFKNEKIGACVKPCLVFNGPKWAQ 120

Query: 151 HPVYKQIKSLFLDFFRGESTDLQDVAGLQHVISMTIQGDFQDGEPLPNVLFRVYKLKSYK 210
               +++++LF+D F+ E  D   + G++HV+S T+  D        N+L R Y++   K
Sbjct: 121 TEELRRLRNLFIDTFQREKVDSIRLQGIEHVLSFTVTDDM-------NILMRSYRILLKK 173

Query: 211 SDQGGKRLPRIELVEIGPRLDFKIGRIHTPSPDMVTEAHKKPKQLEMKTKKNVELDIMGD 270
           S   G+R PRIEL EIGP  DF I R    S D+  +A K+PKQL++  KKN+  D +G+
Sbjct: 174 S---GQRTPRIELEEIGPSADFSIRRTKIASEDLYKQARKQPKQLKVGKKKNISTDALGN 230

Query: 271 KLGRIHMGKQDLGKLQTRKMKGLK 294
             GR+H+GKQ  G +QTR++K L+
Sbjct: 231 TKGRVHLGKQQTGSIQTRRVKALR 254
>dbj|BAB14983.1| (AK024740) unnamed protein product [Homo sapiens]
          Length = 253

 Score =  194 bits (487), Expect = 2e-48
 Identities = 113/259 (43%), Positives = 148/259 (56%), Gaps = 12/259 (4%)

Query: 3   RTVKPKNARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRFNR 62
           R VKPK  RAKR L KRE KL EN+K A+ I G + N  +  ++ D+ ALKKP    + +
Sbjct: 6   RVVKPKTKRAKRFLEKREPKLNENIKNAMLIKGGNANATVTKVLKDVYALKKPYGVLYKK 65

Query: 63  KNDIHPFEDMSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELMVADNF 122
           KN   PFED + LEFFS+K+DCSL +  + +KKR NN+   R + Y + DMIEL + +NF
Sbjct: 66  KNITRPFEDQTSLEFFSKKSDCSLFMFGSHNKKRPNNLVIGRMYDYHVLDMIELGI-ENF 124

Query: 123 KLLSDFKKLTFTVGLKPMFTFQGAAFDTHPVYKQIKSLFLDFFRGESTDLQDVAGLQHVI 182
             L D K      G KPM  F G  FD    Y+++KSL +DFFRG +     +AGL++V+
Sbjct: 125 VSLKDIKNSKCPEGTKPMLIFAGDDFDVTEDYRRLKSLLIDFFRGPTVSNIRLAGLEYVL 184

Query: 183 SMTIQGDFQDGEPLPNVLFRVYKLKSYKSDQGGKRLPRIELVEIGPRLDFKIGRIHTPSP 242
             T             + FR YKL   KS   G R PRIEL E+GP LD  + R H  S 
Sbjct: 185 HFTALNG--------KIYFRSYKLLLKKS---GCRTPRIELEEMGPSLDLVLRRTHLASD 233

Query: 243 DMVTEAHKKPKQLEMKTKK 261
           D+   + K PK L+ K KK
Sbjct: 234 DLYKLSMKMPKALKPKKKK 252
>emb|CAC11120.1| (AL357374) bA353C18.4 (novel protein) [Homo sapiens]
          Length = 257

 Score =  190 bits (478), Expect = 2e-47
 Identities = 112/267 (41%), Positives = 148/267 (54%), Gaps = 12/267 (4%)

Query: 11  RAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRFNRKNDIHPFE 70
           R KR L KRE KL EN+K A+ I G + N  +  ++ D+ ALKKP    + +KN   PFE
Sbjct: 3   RVKRFLEKREPKLNENIKNAMLIKGGNANATVTQVLKDVCALKKPYGVLYKKKNVTRPFE 62

Query: 71  DMSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELMVADNFKLLSDFKK 130
           D + LE  S+K+DCSL +  + +KKR NN+     + Y + DMIEL + +NF  L D K 
Sbjct: 63  DQTSLELLSKKSDCSLFMFGSYNKKRPNNLVIGHMYDYHVLDMIELGI-ENFVSLKDIKN 121

Query: 131 LTFTVGLKPMFTFQGAAFDTHPVYKQIKSLFLDFFRGESTDLQDVAGLQHVISMTIQGDF 190
                G KPM  F G  F+    Y+++KSL  DFFRG +     +AGL++V+  T     
Sbjct: 122 SKCPEGTKPMLIFAGDDFNVTEDYRRLKSLLTDFFRGPTVSNICLAGLEYVLHFTALNG- 180

Query: 191 QDGEPLPNVLFRVYKLKSYKSDQGGKRLPRIELVEIGPRLDFKIGRIHTPSPDMVTEAHK 250
                   + FR YKL   KS   G R PRIEL EIGP L+  + R H  S D+ T + K
Sbjct: 181 -------KIYFRRYKLLLKKS---GCRTPRIELEEIGPSLNLVLRRTHLASDDLYTLSMK 230

Query: 251 KPKQLEMKTKKNVELDIMGDKLGRIHM 277
            PK L+ K KKN+  D  G   GRIHM
Sbjct: 231 MPKALKPKKKKNISNDTFGTTYGRIHM 257
>gb|AAF60765.1| (AC024810) contains similarity to Saccharomyces cerevisiae
           hypothetical protein YKR081c (SP:P36160) [Caenorhabditis
           elegans]
          Length = 297

 Score =  187 bits (469), Expect = 2e-46
 Identities = 111/294 (37%), Positives = 165/294 (55%), Gaps = 11/294 (3%)

Query: 1   MIRTVKPKNARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRF 60
           M+R  K K  + KR LV R +K VEN K+ALF  G   N+ +   M+DL  +KKP   + 
Sbjct: 1   MVRVEKIKTKKGKRVLVNRASKTVENDKKALFCRGAKTNEIISHAMMDLFDMKKPLTTKM 60

Query: 61  NRKNDIHPFEDMSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELMVAD 120
           ++ N  H FED +P+     K D SL VL ++SKK+ N +TF RT+  ++ DM EL +  
Sbjct: 61  DKHNPYHLFEDETPIVRAGSKFDTSLFVLGSNSKKKPNCLTFGRTYDGQLLDMAELRIT- 119

Query: 121 NFKLLSDFKKLTFTVGLKPMFTFQGAAFDTHPVYKQIKSLFLDFFRGESTDLQDVAGLQH 180
           ++K  S+F+    T+G KP    +GAAF++    K+I +L +D+FRG   D   + GL+ 
Sbjct: 120 SYKSSSNFEAAKMTLGSKPCVILEGAAFESDGDMKRIGNLMVDWFRGPKVDTVRLEGLET 179

Query: 181 VISMTIQGDFQDGEPLPNVLFRVYKLKSYKSDQGGKRLPRIELVEIGPRLDFKIGRIHTP 240
           VI  T   +        N+  RVY+    KS       PR+EL E+GP + F++ R    
Sbjct: 180 VIVFTALDE-------TNLALRVYRPMLKKS---ATATPRVELAEMGPSISFEVMRKKLA 229

Query: 241 SPDMVTEAHKKPKQLEMKTKKNVELDIMGDKLGRIHMGKQDLGKLQTRKMKGLK 294
              +   A KKPK L  K +KN+  D+ G++L R+H+GKQ    +QTRK+K L+
Sbjct: 230 DDALFKLACKKPKALMKKRRKNLSEDVFGNQLARVHVGKQRTDDIQTRKVKALR 283
>dbj|BAB02781.1| (AB023036) emb|CAB54156.1~gene_id:MDB19.11~similar to unknown
           protein [Arabidopsis thaliana]
          Length = 314

 Score =  157 bits (392), Expect = 2e-37
 Identities = 106/300 (35%), Positives = 157/300 (52%), Gaps = 20/300 (6%)

Query: 2   IRTVKPKNARAKRALVKREAKLVENVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRFN 61
           IRT  PK  +AKR L  R  KLVE  K+ L + G   +  L  +M +L  LKK    R++
Sbjct: 4   IRT--PKTGKAKRVLESRAPKLVETGKKTLILHGTKTSATLSSVMTELYRLKKGGAIRYS 61

Query: 62  RKND-IHPFED--MSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELMV 118
           R+N+ I PFE    + LEFFS+K DCS+ V  + +KKR +N+   R + +++YD+IE+ +
Sbjct: 62  RRNENIRPFESGGETSLEFFSQKTDCSIFVYGSHTKKRPDNLVLGRMYDHQVYDLIEVGI 121

Query: 119 ADNFKLLSDF---KKLTFTVGLKPMFTFQGAAFDTHPVYKQIKSLFLDFFRGESTDLQDV 175
            +NFK L  F   KK     G KP   F G  F+     K +K +  D FRGE  D  ++
Sbjct: 122 -ENFKSLRAFSYDKKFAPHEGTKPFICFIGEGFENVSELKHLKEVLTDLFRGEVVDNLNL 180

Query: 176 AGLQHVISMTIQGDFQDGEPLPNVLFRVYKLKSYKSDQGGKRLPRIELVEIGPRLDFKIG 235
            GL      +           P  +F  +   + K  + G  +PR+ELVE+GP +D  I 
Sbjct: 181 TGLDRAYVCSAIS--------PTKVFLTHC--ALKLKKSGSIVPRMELVEVGPSMDLVIR 230

Query: 236 RIHTPSPDMVTEAHKKPKQLEMKTKKNVELDIMGDKLGRIHMGKQDLGKLQT-RKMKGLK 294
           R   P+  ++ EA +  K    K +KNV+ D +  K G+I+M  Q L +++   K KG K
Sbjct: 231 RNRLPNDSLMKEAMRTSKDKPKKKEKNVDQDAVLGKTGKIYMPDQKLKEMKLFDKSKGSK 290
>dbj|BAA87188.1| (AB027884) Hypothetical nuclear protein [Schizosaccharomyces pombe]
          Length = 179

 Score =  147 bits (367), Expect = 2e-34
 Identities = 83/190 (43%), Positives = 112/190 (58%), Gaps = 15/190 (7%)

Query: 95  KRKNNM--TFIRTFGYKIYDMIELMVADNFKLLSDFKKLTFTVGLKPMFTFQGAAFDTHP 152
           KRK  M   F+    YK +++  + +     ++          G KPM  FQG  FD HP
Sbjct: 2   KRKGEMQKNFVTPSIYKTFNLTNVFIVQATPIVP---------GTKPMILFQGPVFDAHP 52

Query: 153 VYKQIKSLFLDFFRGESTDLQDVAGLQHVISMTI-QGDFQDGEPLPNVLFRVYKLKSYKS 211
            Y+ IKSLFLDFFRGE     D AGL +VI ++  +    + +PLP V FRVY  K  K+
Sbjct: 53  TYRHIKSLFLDFFRGEPIQKLDSAGLSYVIVVSAAEAQEDETKPLPLVHFRVYGTKLLKT 112

Query: 212 DQGGKRLPRIELVEIGPRLDFKIGRIHTPSPDMVTEAHKKPKQLEMKTKKNVELDIMGDK 271
                 LPR+EL E+GPR+DF I R+     D++ EA KKPK  E K KKNV++DI+G+K
Sbjct: 113 KTN---LPRVELEEMGPRIDFNIRRVQPAESDVLEEALKKPKTQEPKPKKNVDVDIIGNK 169

Query: 272 LGRIHMGKQD 281
           +GRIH+ +QD
Sbjct: 170 VGRIHVDQQD 179
>emb|CAB62866.1| (AL035475) hypothetical protein, MAL4P2.25 [Plasmodium falciparum]
          Length = 693

 Score = 37.1 bits (84), Expect = 0.30
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 8/110 (7%)

Query: 26  NVKQALFIPGQSCNKNLHDIMVDLSALKKPDMKRFNRKNDIHPFEDMSP--LEFFSEKND 83
           N+K    + G  CN  L+  + D++A      KR N +N I  +  +     +   + ND
Sbjct: 491 NIKNVFIVGGVGCNNFLYQSLKDMAA------KRDNEENQIKEYNRLRKRLRKKMKKIND 544

Query: 84  CSLMVLMTSSKKRKNNMTFIRTFGYKIYDMIELMVADNFKLLSDFKKLTF 133
             L VL  S    K++  +  +  +KIY    L    +  +LS FK   F
Sbjct: 545 EKLSVLKISKDSLKSDHDYNSSLSWKIYLKNLLKKRKSKDILSTFKLFNF 594
>pir||B82940 conserved hypothetical membrane lipoprotein UU045 [imported] -
           Ureaplasma urealyticum
 gb|AAF30450.1|AE002104_3 (AE002104) conserved hypothetical membrane lipoprotein [Ureaplasma
           urealyticum]
          Length = 834

 Score = 32.8 bits (73), Expect = 5.9
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 9/122 (7%)

Query: 50  SALKKPDMKR-FNRKNDI-HPFEDMSPLEFFSEKNDCSLMVLMTSSKKRKNNMTFIRTFG 107
           S+++K ++K+  N  ND+    +D+    F S K+   L+V  T  K  +         G
Sbjct: 59  SSVQKDEIKKPLNLPNDVVFSVKDV----FVSHKDQSVLIVKYTLKKGNEIQEYTYEIKG 114

Query: 108 YKIYDMIELMVADNFKLLSDFKKLTFTVGLKPMFTFQGAAFDTHPVYKQI--KSLFLDFF 165
           +K     + +V D  +   DFKK+   + LK  F F+ AAF     Y Q+    ++ +++
Sbjct: 115 FKSVYEKDKIVNDLSQANEDFKKIVNNIRLKDTFDFKLAAFPNQN-YDQLLPSQIYKNYY 173

Query: 166 RG 167
           +G
Sbjct: 174 QG 175
CPU time:    33.15 user secs.	    0.85 sys. secs	   34.00 total secs.

  Database: nr
    Posted date:  Feb 10, 2001  7:10 PM
  Number of letters in database: 195,544,254
  Number of sequences in database:  618,844
  
Lambda     K      H
   0.320    0.137    0.388 

Gapped
Lambda     K      H
   0.270   0.0470    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114201698
Number of Sequences: 618844
Number of extensions: 4599809
Number of successful extensions: 9460
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9429
Number of HSP's gapped (non-prelim): 13
length of query: 344
length of database: 195,544,254
effective HSP length: 58
effective length of query: 286
effective length of database: 159,651,302
effective search space: 45660272372
effective search space used: 45660272372
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 72 (32.5 bits)