BLASTP 2.1.1 [Aug-8-2000]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4323640|gb|AAD16459.1| (AF102805) Peter Pan
[Drosophila melanogaster]
         (460 letters)

Database: nr
           618,844 sequences; 195,544,254 total letters

Searching..................................................

E-value threshold for inclusion in PSI-Blast iteration 2: 0.002 
E-value threshold for inclusion in PSI-Blast iteration 3:



Results of PSI-Blast iteration 1

Distribution of 28 Blast Hits on the Query Sequence




Legend:

- means that the alignment score was below the threshold on the previous iteration

- means that the alignment was checked on the previous iteration


Sequences with E-value BETTER than threshold
Score E Sequences producing significant alignments: (bits) Value
gb|AAD16459.1| (AF102805) Peter Pan [Drosophila melanogaster] 692 0.0
gb|AAF55851.1| (AE003733) ppan gene product [Drosophila melanoga... 687 0.0
emb|CAC18877.1| (AJ300588) SSF1/P2Y11 chimeric protein [Homo sap... 610 e-174
ref|XP_009028.1| peter pan (Drosophila) homolog [Homo sapiens] 567 e-160
ref|NP_064615.1| peter pan (Drosophila) homolog; second-step spl... 563 e-159
dbj|BAB10077.1| (AB010069) contains similarity to RNA binding pr... 410 e-113
ref|NP_011933.1| homologous to Ssf2p; Ssf1p [Saccharomyces cerev... 394 e-109
gb|AAF39738.1|AC005935_5 (AC005935) RNA Binding Protein 1 [Leish... 382 e-105
pir||T39008 probable mating protein - fission yeast (Schizosacch... 373 e-102
pir||T32923 hypothetical protein K09H9.6 - Caenorhabditis elegan... 342 5e-93
ref|NP_010598.1| possibly involved in mating; Ssf2p [Saccharomyc... 330 2e-89
gb|AAH00535.1|AAH00535 (BC000535) Unknown (protein for MGC:3007)... 228 7e-59
pir||T01938 hypothetical protein F11O4.6 - Arabidopsis thaliana ... 47 5e-04
emb|CAB77726.1| (AL161492) hypothetical protein [Arabidopsis tha... 45 0.002
Sequences with E-value WORSE than threshold

pir||T50616 hypothetical protein DKFZp761G0415.1 - human (fragment) 45 0.002
dbj|BAB14086.1| (AK022537) unnamed protein product [Homo sapiens] 44 0.003
emb|CAC18315.1| (AL451022) probable IMP4 protein [Neurospora cra... 42 0.017
emb|CAC01521.1| (AL391034) conserved hypothetical protein [Schiz... 40 0.043
emb|CAB55338.1| (AJ006754) hypothetical protein [Yarrowia lipoly... 37 0.35
gb|AAF53162.1| (AE003635) CG6712 gene product [Drosophila melano... 37 0.47
sp|P32113|COPA_ENTHR COPPER/POTASSIUM-TRANSPORTING ATPASE A >gi|... 37 0.49
sp|O14180|YDS4_SCHPO HYPOTHETICAL 35.8 KD PROTEIN C4F8.04 IN CHR... 35 1.3
sp|O13823|YEE7_SCHPO HYPOTHETICAL 33.4 KDA PROTEIN C19A8.07C IN ... 35 1.9
emb|CAB71230.1| (AL049768) possible BING4-related protein. [Leis... 35 1.9
Alignments
>gb|AAD16459.1| (AF102805) Peter Pan [Drosophila melanogaster]
          Length = 460

 Score =  692 bits (1767), Expect = 0.0
 Identities = 412/460 (89%), Positives = 412/460 (89%)

Query: 1   MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN 60
           MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN
Sbjct: 1   MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN 60

Query: 61  LREKRMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV 120
           LREKRMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV
Sbjct: 61  LREKRMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV 120

Query: 121 ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV 180
           ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV
Sbjct: 121 ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV 180

Query: 181 LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGYXXXXX 240
           LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGY     
Sbjct: 181 LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGYASESE 240

Query: 241 XXXXXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV 300
                QSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV
Sbjct: 241 AEDDEQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV 300

Query: 301 KTEDEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD 360
           KTEDEKET                   AENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD
Sbjct: 301 KTEDEKETLRKLVEKKRKQKEQRKKEQAENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD 360

Query: 361 AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERTXXXXX 420
           AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERT     
Sbjct: 361 AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERTDKYDR 420

Query: 421 XXXXXXXXXXXXXXPKNGRAKFDPKNKRAKFDHRKSRKSK 460
                         PKNGRAKFDPKNKRAKFDHRKSRKSK
Sbjct: 421 KDKFDRKDKKDKFDPKNGRAKFDPKNKRAKFDHRKSRKSK 460
>gb|AAF55851.1| (AE003733) ppan gene product [Drosophila melanogaster]
          Length = 460

 Score =  687 bits (1756), Expect = 0.0
 Identities = 409/460 (88%), Positives = 410/460 (88%)

Query: 1   MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN 60
           MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN
Sbjct: 1   MGGKKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASN 60

Query: 61  LREKRMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV 120
           LREKRMNRI+DFV LSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV
Sbjct: 61  LREKRMNRIKDFVSLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDV 120

Query: 121 ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV 180
           ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV
Sbjct: 121 ISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCV 180

Query: 181 LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGYXXXXX 240
           LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGY     
Sbjct: 181 LFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFVTKDGYASESE 240

Query: 241 XXXXXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV 300
                QSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV
Sbjct: 241 AEDDEQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVV 300

Query: 301 KTEDEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD 360
           KTEDEKET                   AENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD
Sbjct: 301 KTEDEKETLRKLVEKKRKQKEQRKKEQAENRARNLKLKKDEKWAAKRAAEGRTDSDPEDD 360

Query: 361 AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERTXXXXX 420
           AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERT     
Sbjct: 361 AEYYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTKDKNDKSERTDKYDR 420

Query: 421 XXXXXXXXXXXXXXPKNGRAKFDPKNKRAKFDHRKSRKSK 460
                         PKN RAKFDPKNKRAKFDHRKSRKSK
Sbjct: 421 KDKFDRKDKKDKFDPKNRRAKFDPKNKRAKFDHRKSRKSK 460
>emb|CAC18877.1| (AJ300588) SSF1/P2Y11 chimeric protein [Homo sapiens]
          Length = 794

 Score =  610 bits (1558), Expect = e-174
 Identities = 148/430 (34%), Positives = 234/430 (54%), Gaps = 30/430 (6%)

Query: 5   KKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREK 64
           +  H K   A  +          PHSFV  RG     I  L+LD RR+MEP TAS L+ +
Sbjct: 6   RSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTASRLQVR 65

Query: 65  RMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLS 124
           + N ++D V ++    V+H  I +K  T + FK++RLP GP+LTF+V +++L RDV+S  
Sbjct: 66  KKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRDVVSSL 125

Query: 125 KKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSY 184
           ++  +    F H PL+++N+F   G H+KLMAT FQN+FPSIN+  VN+ TI+RC+L  Y
Sbjct: 126 RRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRCLLIDY 185

Query: 185 NPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFV-TKDGYXXXXXXXX 243
           NPD++ ++ RHYS++VVPVG  R ++K+++   PN+ +  ++ + + T  G         
Sbjct: 186 NPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSESEAEPD 245

Query: 244 XXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTE 303
              +   L Q +  +GN+  ++S+++L EIGPR+T+QLIK++EG+  G+V++H  V KTE
Sbjct: 246 GDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTE 305

Query: 304 DEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDEKWAA----KRAAEGRTDSD--- 356
           +E +                    A+N  R  + ++  +  +    K+A  G +D +   
Sbjct: 306 EELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASG 365

Query: 357 -PEDDAE----------------YYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNK 399
            P   A                 Y+ + VGE P E+LF  EAK  R   S G     K K
Sbjct: 366 IPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP-EAKQKRLAKSPG----RKRK 420

Query: 400 RAKLDTKDKN 409
           R ++D   K+
Sbjct: 421 RWEMDRGAKS 430
>ref|XP_009028.1| peter pan (Drosophila) homolog [Homo sapiens]
          Length = 473

 Score =  567 bits (1446), Expect = e-160
 Identities = 148/427 (34%), Positives = 232/427 (53%), Gaps = 30/427 (7%)

Query: 5   KKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREK 64
           +  H K   A  +          PHSFV  RG     I  L+LD RR+MEP TAS L+ +
Sbjct: 6   RSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTASRLQVR 65

Query: 65  RMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLS 124
           + N ++D V ++    V+H  I +K  T + FK++RLP GP+LTF+V Q++L RDV+S  
Sbjct: 66  KKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVLQYSLVRDVVSSL 125

Query: 125 KKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSY 184
           ++  +    F H PL+++N+F   G H+KLMAT FQN+FPSIN+  VN+ TI+RC+L  Y
Sbjct: 126 RRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRCLLIDY 185

Query: 185 NPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFV-TKDGYXXXXXXXX 243
           NPD++ ++ RHYS++VVPVG  R ++K+++   PN+ +  ++ + + T  G         
Sbjct: 186 NPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSESEAEPD 245

Query: 244 XXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTE 303
              +   L Q +  +GN+  ++S+++L EIGPR+T+QLIK++EG+  G+V++H  V KTE
Sbjct: 246 GDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTE 305

Query: 304 DEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDEKWAA----KRAAEGRTDSD--- 356
           +E +                    A+N  R  + ++  +  +    K+A  G +D +   
Sbjct: 306 EELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASG 365

Query: 357 -PEDDAE----------------YYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNK 399
            P   A                 Y+ + VGE P E+LF  EAK  R   S G     K K
Sbjct: 366 IPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP-EAKQKRLAKSPG----RKRK 420

Query: 400 RAKLDTK 406
           R ++D  
Sbjct: 421 RWEMDRG 427
>ref|NP_064615.1| peter pan (Drosophila) homolog; second-step splicing factor 1 [Homo
           sapiens]
 emb|CAB99252.1| (AJ292529) suppressor of sterile four 1 [Homo sapiens]
          Length = 473

 Score =  563 bits (1438), Expect = e-159
 Identities = 147/427 (34%), Positives = 232/427 (53%), Gaps = 30/427 (7%)

Query: 5   KKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREK 64
           +  H K   A  +          PHSFV  RG     I  L+LD RR+MEP TAS L+ +
Sbjct: 6   RSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTASRLQVR 65

Query: 65  RMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLS 124
           + N ++D V ++    V+H  I +K  T + FK++RLP GP+LTF+V +++L RDV+S  
Sbjct: 66  KKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRDVVSSL 125

Query: 125 KKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSY 184
           ++  +    F H PL+++N+F   G H+KLMAT FQN+FPSIN+  VN+ TI+RC+L  Y
Sbjct: 126 RRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRCLLIDY 185

Query: 185 NPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVPNLGKCNEVVDFV-TKDGYXXXXXXXX 243
           NPD++ ++ RHYS++VVPVG  R ++K+++   PN+ +  ++ + + T  G         
Sbjct: 186 NPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSESEAEPD 245

Query: 244 XXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTE 303
              +   L Q +  +GN+  ++S+++L EIGPR+T+QLIK++EG+  G+V++H  V KTE
Sbjct: 246 GDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTE 305

Query: 304 DEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDEKWAA----KRAAEGRTDSD--- 356
           +E +                    A+N  R  + ++  +  +    K+A  G +D +   
Sbjct: 306 EELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASG 365

Query: 357 -PEDDAE----------------YYKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNK 399
            P   A                 Y+ + VGE P E+LF  EAK  R   S G     K K
Sbjct: 366 IPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP-EAKQKRLAKSPG----RKRK 420

Query: 400 RAKLDTK 406
           R ++D  
Sbjct: 421 RWEMDRG 427
>dbj|BAB10077.1| (AB010069) contains similarity to RNA binding
           protein~gene_id:MAC9.8 [Arabidopsis thaliana]
          Length = 346

 Score =  410 bits (1044), Expect = e-113
 Identities = 111/274 (40%), Positives = 171/274 (61%), Gaps = 3/274 (1%)

Query: 27  APHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNRIQDFVCLSSFFHVSHMGI 86
            P SFV  R      +  L +D R++M P+TA +L+EK+ N ++DF+ +S    V+H  +
Sbjct: 33  IPKSFVFSRMKLAGPVKQLQMDLRKLMLPYTALSLKEKKRNTLRDFLNVSGPMGVTHFLM 92

Query: 87  FNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFS 146
            +K ++ LS +V R P+GP+LTFK+HQ++LA D+     +     D FK  PL++++ F 
Sbjct: 93  LSKTASSLSLRVARTPQGPTLTFKIHQYSLASDIAQSQLRPRCPQDLFKSPPLIVLSGFG 152

Query: 147 GDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHYSVQVVPVGLK 206
               HLKL    FQN+FP+I++ TV + T +R VL +YN DTKL++ RHYS+++ PVG+ 
Sbjct: 153 SQELHLKLATIMFQNIFPAIDINTVKLSTCQRLVLLNYNKDTKLIDFRHYSIRLQPVGVS 212

Query: 207 RAVQKIVKG-TVPNLGKCNEVVDFVTKDGYXXXXXXXXXXQSHVVLAQTLKSKGNLEDKK 265
           R ++K V+   VP+L    +V DFVTK GY           + V L+  L  + N    K
Sbjct: 213 RRIRKFVQNHQVPDLRNLQDVSDFVTKAGYGSESEGDEEAAT-VTLSSDL-GRVNKGATK 270

Query: 266 SSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHV 299
           S++KL EIGPR+TMQL+K+EEGL TG +++ ++ 
Sbjct: 271 SAVKLQEIGPRMTMQLVKVEEGLCTGGIIFSEYE 304
>ref|NP_011933.1| homologous to Ssf2p; Ssf1p [Saccharomyces cerevisiae]
 sp|P38789|SSF1_YEAST SSF1 PROTEIN
 pir||S46700 SSF1 protein - yeast (Saccharomyces cerevisiae)
 gb|AAB68379.1| (U00061) Ssf1p [Saccharomyces cerevisiae]
 gb|AAA79980.1| (U18113) Ssf1p [Saccharomyces cerevisiae]
          Length = 453

 Score =  394 bits (1004), Expect = e-109
 Identities = 114/421 (27%), Positives = 196/421 (46%), Gaps = 82/421 (19%)

Query: 6   KVHPKTRTAAFKASEPSEIVEAPHSFVIHRG---LACPYITDLTLDFRRIMEPFTASNLR 62
           K   K RT A    E  + +  P S VI  G   LA   +  L  DFR+IM+P TA  L+
Sbjct: 3   KRRQKKRTHAQLTPEQEQGI--PKSMVIRVGQTSLANHSLNQLVKDFRQIMQPHTAIKLK 60

Query: 63  EKRMNRIQDFVCLSSFFHVSHMGIFNKA--STQLSFKVVRLPRGPSLTFKVHQFTLARDV 120
           E++ N+++DFV +     V+H+ +F ++  +  +S K+ R P+GP++TF+V  ++L RD+
Sbjct: 61  ERKSNKLKDFVVMCGPLGVTHLFMFTQSEKTGNVSLKIARTPQGPTVTFQVLDYSLGRDI 120

Query: 121 IS-LSKKQMIDNDHFKHAPLVIMNNFSGDGKH---------LKLMATTFQNMFPSINLAT 170
              L + + ++ND   + PL+++N FS   +           K++ + FQN+FP +N A 
Sbjct: 121 KKFLKRPKSLNNDDVLNPPLLVLNGFSTSKRSGEDDQDVNVEKVIVSMFQNIFPPLNPAR 180

Query: 171 VNIGTIRRCVLFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKG------TVPNLGKCN 224
            ++ +I+R  + + + +T  + MRHY + +  V + R ++++ K       TVPNL +  
Sbjct: 181 TSLNSIKRVFMINKDRETGEISMRHYFIDIREVEISRNLKRLYKAKNNLSKTVPNLHRKE 240

Query: 225 EVVDFVTKDGYXXXXXXXXXXQSHVVL-----------AQTLKSK--------------- 258
           ++   +                  +V            +Q+LKS+               
Sbjct: 241 DISSLILDHDLGAYTSESEIEDDAIVRVVDNQDVKAKHSQSLKSQRTPVEKKDNKEREKE 300

Query: 259 --------------GNLE--DKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKT 302
                          NL+   +K +IKL E+GPRLT++L+KIEEG+ +G+VL+H+ V K+
Sbjct: 301 TEEEDVEMEEPKPSENLQPTPRKKAIKLTELGPRLTLKLVKIEEGICSGKVLHHEFVQKS 360

Query: 303 EDEKETXXXXXXXXXXXXXXXXXXXAENR-----------ARNLKLKKDEKWAAKRAAEG 351
            +E +                     EN             R L+ +K       RAAEG
Sbjct: 361 SEEIKALEKRHAAKMRLKEQRKKEQEENIAKKKAVKDAKKQRKLERRKA------RAAEG 414

Query: 352 R 352
            
Sbjct: 415 G 415
>gb|AAF39738.1|AC005935_5 (AC005935) RNA Binding Protein 1 [Leishmania major]
 gb|AAF43468.1|AC012381_4 (AC012381) RNA Binding Protein 1 [Leishmania major]
          Length = 374

 Score =  382 bits (973), Expect = e-105
 Identities = 97/342 (28%), Positives = 172/342 (49%), Gaps = 21/342 (6%)

Query: 10  KTRTAA-FKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNR 68
           K RTA   K          P S +I+RG    ++  L  ++R +  P+++  L  K  + 
Sbjct: 6   KGRTAMPGKLDTTEADKRTPKSIIIYRGEVGIHVRSLMHEWRNVFLPWSSKKLHGKNKS- 64

Query: 69  IQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQM 128
           ++DF+ +++ F  SH+ +F   S   S +++R   GP+L+F+V  FTL +++++  ++ +
Sbjct: 65  LKDFLAVAATFSASHLQLFTAPSQGTSLRIMRFFNGPTLSFRVLSFTLHKEIVAKQRRPV 124

Query: 129 -IDNDHFKHAPLVIMNNFSG-DGKH---LKLMATTFQNMFPSINLATVNIGTIRRCVLFS 183
            +D   ++ AP+V++NNF+  D  H   + L+  TF+ +FPS+N+ T+    I+R  LF 
Sbjct: 125 AVDRAAWEVAPIVVLNNFTHPDLAHRAEVPLLTATFKALFPSLNVQTIQSSEIQRICLFH 184

Query: 184 YNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKGTVP----NLGKCNEVVDFVTKDGYXXXX 239
           Y+    +VE+RHY +    VG+ + V+K+++   P     L   +EV+D   +D +    
Sbjct: 185 YDHVEHVVEVRHYYINARTVGVTKTVKKLLENRRPTKLGTLESIDEVLD--REDAWSDTD 242

Query: 240 XXXXXXQSHVVLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHV 299
                    V L Q  +       ++  +KL EIGPR+T+QL K+E G   GEV+YH   
Sbjct: 243 GEG----EEVPLVQPFRQ----HREQCRVKLQEIGPRMTLQLSKVENGFAGGEVIYHRTE 294

Query: 300 VKTEDEKETXXXXXXXXXXXXXXXXXXXAENRARNLKLKKDE 341
            KT  E +                     EN  R  + ++D+
Sbjct: 295 KKTLREVQVNASKVRARKTEKAKRRALQDENVQRKRQKREDK 336
>pir||T39008 probable mating protein - fission yeast (Schizosaccharomyces pombe)
 emb|CAB11063.1| (Z98531) putative mating protein [Schizosaccharomyces pombe]
          Length = 361

 Score =  373 bits (949), Expect = e-102
 Identities = 100/323 (30%), Positives = 166/323 (50%), Gaps = 23/323 (7%)

Query: 31  FVIHRG--LACPYITDLTLDFRRIMEPFTASNLREKRMNRIQDFVCLSSFFHVSHMGIFN 88
            VI  G       ++ LT D R +MEP TA  L+E++ N+I+D++ ++    V+H+ + +
Sbjct: 1   MVIRSGASEVGRSLSLLTRDLRHMMEPHTAIRLKERKANKIKDYLTMAGPLGVTHLLVLS 60

Query: 89  KASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNF--- 145
           +     + +++R PRGPSL F++H++ L +DV  L K        F   PL++MN+F   
Sbjct: 61  RTDNNANLRIIRAPRGPSLHFRIHEYMLNKDVRRLQKNPKSPTTEFLTPPLLVMNHFNQN 120

Query: 146 -SGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHYSVQVVPVG 204
            S D  H  L+ TTFQNMFP I++   NI +++R +L +   D   +++RH+ +   PVG
Sbjct: 121 SSKDSPHEALLTTTFQNMFPPISVQHTNINSVKRVLLLNR-RDDGYIDLRHFIISTKPVG 179

Query: 205 LKRAVQKIVKGT-----VPNLGKCNEVVDFVTK-DGYXXXXXXXXXXQSHVV-------- 250
           + R ++ ++KG      +P+L    ++ D+V   DG           +   V        
Sbjct: 180 ISRPIRHLLKGEKKDSDIPDLHNVRDISDYVLHGDGISGAASDSEIEEDATVEIDRPVPT 239

Query: 251 --LAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTEDEKET 308
                 L +   L+ K+ +IKL EIGPR+T++LIKI E  + G+VLYH HV K+++E + 
Sbjct: 240 KTEENLLSASQLLKPKQQAIKLIEIGPRMTLELIKITEDAMGGKVLYHSHVHKSKEEIKQ 299

Query: 309 XXXXXXXXXXXXXXXXXXXAENR 331
                               EN 
Sbjct: 300 QDNFHEQSRALKEKRKKEQDENV 322
 Score =  373 bits (949), Expect = e-102
 Identities = 100/323 (30%), Positives = 166/323 (50%), Gaps = 23/323 (7%)

Query: 31  FVIHRG--LACPYITDLTLDFRRIMEPFTASNLREKRMNRIQDFVCLSSFFHVSHMGIFN 88
            VI  G       ++ LT D R +MEP TA  L+E++ N+I+D++ ++    V+H+ + +
Sbjct: 1   MVIRSGASEVGRSLSLLTRDLRHMMEPHTAIRLKERKANKIKDYLTMAGPLGVTHLLVLS 60

Query: 89  KASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNF--- 145
           +     + +++R PRGPSL F++H++ L +DV  L K        F   PL++MN+F   
Sbjct: 61  RTDNNANLRIIRAPRGPSLHFRIHEYMLNKDVRRLQKNPKSPTTEFLTPPLLVMNHFNQN 120

Query: 146 -SGDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHYSVQVVPVG 204
            S D  H  L+ TTFQNMFP I++   NI +++R +L +   D   +++RH+ +   PVG
Sbjct: 121 SSKDSPHEALLTTTFQNMFPPISVQHTNINSVKRVLLLNR-RDDGYIDLRHFIISTKPVG 179

Query: 205 LKRAVQKIVKGT-----VPNLGKCNEVVDFVTK-DGYXXXXXXXXXXQSHVV-------- 250
           + R ++ ++KG      +P+L    ++ D+V   DG           +   V        
Sbjct: 180 ISRPIRHLLKGEKKDSDIPDLHNVRDISDYVLHGDGISGAASDSEIEEDATVEIDRPVPT 239

Query: 251 --LAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTEDEKET 308
                 L +   L+ K+ +IKL EIGPR+T++LIKI E  + G+VLYH HV K+++E + 
Sbjct: 240 KTEENLLSASQLLKPKQQAIKLIEIGPRMTLELIKITEDAMGGKVLYHSHVHKSKEEIKQ 299

Query: 309 XXXXXXXXXXXXXXXXXXXAENR 331
                               EN 
Sbjct: 300 QDNFHEQSRALKEKRKKEQDENV 322
>pir||T32923 hypothetical protein K09H9.6 - Caenorhabditis elegans
 gb|AAB97575.1| (AF043700) contains similarity to human RNA-binding protein FUS/TLS
           (SW:Q28009) [Caenorhabditis elegans]
          Length = 608

 Score =  342 bits (869), Expect = 5e-93
 Identities = 84/238 (35%), Positives = 143/238 (59%), Gaps = 7/238 (2%)

Query: 4   KKKVHPKTRTAAFKASEPSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLRE 63
           ++K   K +   F  ++  E+   PH  VIHRG    Y+  L  D R ++EP TA NL+ 
Sbjct: 32  QEKFVKKLQKQKFLENKEIELARQPHCLVIHRGDVGKYVKGLESDLRNLVEPNTAKNLKI 91

Query: 64  KRMNRIQDFVCLSSFFHVSHMGIFNKASTQLSFKVVRLPRGPSLTFKVHQFTLARDVISL 123
            + N I+DF+   +   V++M +   +   L  +++R  +GP+L+FKV Q++LAR V++ 
Sbjct: 92  LKRNNIKDFIVNGAVLGVTNMMVLTSSDASLQLRMMRFSQGPTLSFKVKQYSLARHVVNC 151

Query: 124 SKKQMIDNDHFKHAPLVIMNNFS-GDGKHLKLMATTFQNMFPSINLATVNIGTIRRCVLF 182
            K+ +  +  FK +PLV+MN F  G  KHL L+ T  QNMFPSIN+ T+ +G ++RC++ 
Sbjct: 152 QKRPVATDKLFKSSPLVVMNGFGDGTQKHLSLVQTFIQNMFPSINVDTIQLGNLKRCLIV 211

Query: 183 SYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKG------TVPNLGKCNEVVDFVTKDG 234
           SY+ +T  ++MRH++++VV  GL ++V+K+++        +PNL    ++ D+    G
Sbjct: 212 SYDEETDEIQMRHFAIRVVASGLNKSVKKLMQAEKTMGKNIPNLSTYKDISDYFLNPG 269
 Score = 98.5 bits (243), Expect = 1e-19
 Identities = 47/163 (28%), Positives = 67/163 (40%), Gaps = 6/163 (3%)

Query: 246 QSHVVLAQTL-KSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTED 304
           Q  V L Q + + +G    +KS+++LHEIGPRLT++L+KIEEG+  GEVLYH H  KT D
Sbjct: 315 QQEVELPQDISEGRGCGVGQKSNVRLHEIGPRLTLELVKIEEGIDEGEVLYHKHNAKTPD 374

Query: 305 EKETXXXXXXXXXXXXXXXXXXXAENRARNL----KLKKDEKWAAKRAAEGRTDSDPEDD 360
           E                       +   R L    + +  E+   K   E          
Sbjct: 375 ELIKLRAHMDKKKQMKKRREQESEQRVIRRLTIVKEQQDAEEAEVKAIRENAARKQAAAT 434

Query: 361 AEYYKEEVGEEPDEEL-FKMEAKSSRKRPSLGGGMKYKNKRAK 402
            +  + E  +E D E+    E    R     G     K  R +
Sbjct: 435 GQVEEVENQKEKDREIAMNRERDLKRANEEWGTSEASKRPRYE 477
>ref|NP_010598.1| possibly involved in mating; Ssf2p [Saccharomyces cerevisiae]
 sp|Q12153|SSF2_YEAST SSF2 PROTEIN
 pir||S50248 SSF2 protein - yeast (Saccharomyces cerevisiae)
 gb|AAA79981.1| (U18114) Ssf2p [Saccharomyces cerevisiae]
 gb|AAB64748.1| (U28374) Ssf2p [Saccharomyces cerevisiae]
          Length = 453

 Score =  330 bits (838), Expect = 2e-89
 Identities = 80/293 (27%), Positives = 148/293 (50%), Gaps = 28/293 (9%)

Query: 6   KVHPKTRTAAFKASEPSEIVEAPHSFVIHRG---LACPYITDLTLDFRRIMEPFTASNLR 62
           K   K RT A    E     + P S VI  G   LA   +  L  DFR+IM+P TA  L+
Sbjct: 3   KRRQKKRTHAQITPEQE--RDIPKSMVIRVGQTSLANHSLNQLVKDFRQIMQPHTAVKLK 60

Query: 63  EKRMNRIQDFVCLSSFFHVSHMGIFNKA--STQLSFKVVRLPRGPSLTFKVHQFTLARDV 120
           E++ N+++DFV +     V+H+ +F ++  +  +S K+ R P+GP++TF+V  ++L RD+
Sbjct: 61  ERKSNKLKDFVVMCGPLGVTHLFMFTQSEKTGNVSLKIARTPQGPTVTFQVLDYSLGRDI 120

Query: 121 IS-LSKKQMIDNDHFKHAPLVIMNNFSGDGKH---------LKLMATTFQNMFPSINLAT 170
              L + + ++ND   + PL+++N FS   +           K++ + FQN+FP +N A 
Sbjct: 121 KKFLKRPKSLNNDDVLNPPLLVLNGFSTSKRSDEDDQDVNVEKVIVSMFQNIFPPLNPAR 180

Query: 171 VNIGTIRRCVLFSYNPDTKLVEMRHYSVQVVPVGLKRAVQKIVKG------TVPNLGKCN 224
            ++ +I+R  + + + +T  + MRHY + +  V + R ++++ K       TVPNL +  
Sbjct: 181 TSLNSIKRIFMINKDRETGEISMRHYFIDIREVEISRNLKRLYKAKNNLSKTVPNLHRKE 240

Query: 225 EVVDFVTKDGYXXXXXXXXXXQSHVVLA---QTLKSK--GNLEDKKSSIKLHE 272
           ++   +                  +V     Q +K+K       +K+ +K+ +
Sbjct: 241 DISSLILDHDLGAYTSESEIEDDAIVRVVDNQDVKAKHSQTSLSQKTPVKMTD 293
 Score = 81.0 bits (198), Expect = 3e-14
 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 11/90 (12%)

Query: 263 DKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTEDEKETXXXXXXXXXXXXXX 322
            +K +IKL E+GPRLT++L+KIE+G+ +G+VL+H+ V K+ +E +               
Sbjct: 321 PRKKAIKLTELGPRLTLKLVKIEDGICSGKVLHHEFVQKSSEEIKALEKRHAAKMRLKEQ 380

Query: 323 XXXXXAENR-----------ARNLKLKKDE 341
                 EN             R L+ +K  
Sbjct: 381 RRKEQEENIAKKKAVKDAKKQRKLERRKAR 410
>gb|AAH00535.1|AAH00535 (BC000535) Unknown (protein for MGC:3007) [Homo sapiens]
          Length = 251

 Score =  228 bits (578), Expect = 7e-59
 Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 30/223 (13%)

Query: 209 VQKIVKGTVPNLGKCNEVVDFV-TKDGYXXXXXXXXXXQSHVVLAQTLKSKGNLEDKKSS 267
           ++K+++   PN+ +  ++ + + T  G            +   L Q +  +GN+  ++S+
Sbjct: 1   MKKLLQEKFPNMSRLQDISELLATGAGLSESEAEPDGDHNITELPQAVAGRGNMRAQQSA 60

Query: 268 IKLHEIGPRLTMQLIKIEEGLLTGEVLYHDHVVKTEDEKETXXXXXXXXXXXXXXXXXXX 327
           ++L EIGPR+T+QLIK++EG+  G+V++H  V KTE+E +                    
Sbjct: 61  VRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTEEELQAILEAKEKKLRLKAQRQAQQ 120

Query: 328 AENRARNLKLKKDEKWAA----KRAAEGRTDSD----PEDDAE----------------Y 363
           A+N  R  + ++  +  +    K+A  G +D +    P   A                 Y
Sbjct: 121 AQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEY 180

Query: 364 YKEEVGEEPDEELFKMEAKSSRKRPSLGGGMKYKNKRAKLDTK 406
           + + VGE P E+LF  EAK  R   S G     K KR ++D  
Sbjct: 181 FCQAVGEAPSEDLFP-EAKQKRLAKSPG----RKRKRWEMDRG 218
>pir||T01938 hypothetical protein F11O4.6 - Arabidopsis thaliana
 gb|AAC62782.1| (AF096370) contains similarity to a C. elegans hypothetical protein
           F44G4.1 (GB:Z49910) and several yeast hypothetical
           proteins such as 35.1 KD protein in NAM8-GAR1 intergenic
           region (SP:P38805) [Arabidopsis thaliana]
          Length = 434

 Score = 47.1 bits (111), Expect = 5e-04
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 16/100 (16%)

Query: 96  FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLM 155
             ++ LP GP+  FK+    L +D+ +             H P +++NNF+    +   +
Sbjct: 213 LLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTS-------HQPELVLNNFTTRLGNR--V 263

Query: 156 ATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRH 195
              FQ++FP  +         RR V F    D   +  RH
Sbjct: 264 GRFFQSLFPP-DPNFRG----RRVVTFHNQRD--FIFFRH 296
>emb|CAB77726.1| (AL161492) hypothetical protein [Arabidopsis thaliana]
          Length = 343

 Score = 45.1 bits (106), Expect = 0.002
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 16/100 (16%)

Query: 96  FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLM 155
             ++ LP GP+  FK+    L +D+ +             H P +++NNF+    +   +
Sbjct: 193 LLIIGLPNGPTAHFKLSNLVLRKDIKNHGNPTS-------HQPELVLNNFTTRLGNR--V 243

Query: 156 ATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRH 195
              FQ++FP  +         RR V F    D   +  RH
Sbjct: 244 GRFFQSLFPP-DPNFRG----RRVVTFHNQRD--FIFFRH 276
>pir||T50616 hypothetical protein DKFZp761G0415.1 - human (fragment)
          Length = 256

 Score = 44.7 bits (105), Expect = 0.002
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 101 LPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQ 160
           LP GP+  FK+    L +++    K         +H P +I+NNF+    H   +   F 
Sbjct: 120 LPNGPTAHFKMSSVRLRKEIKRRGKDPT------EHIPEIILNNFTTRLGHS--IGRMFA 171

Query: 161 NMFP 164
           ++FP
Sbjct: 172 SLFP 175
>dbj|BAB14086.1| (AK022537) unnamed protein product [Homo sapiens]
          Length = 349

 Score = 44.3 bits (104), Expect = 0.003
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 101 LPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLMATTFQ 160
           LP GP+  FK+    L +++    K         +H P +I+NNF+    H   +   F 
Sbjct: 213 LPNGPTAHFKMSSVRLRKEIKRRGKDPT------EHIPEIILNNFTTRLGHS--IGRMFA 264

Query: 161 NMFP 164
           ++FP
Sbjct: 265 SLFP 268
>emb|CAC18315.1| (AL451022) probable IMP4 protein [Neurospora crassa]
          Length = 295

 Score = 41.6 bits (97), Expect = 0.017
 Identities = 42/211 (19%), Positives = 84/211 (38%), Gaps = 26/211 (12%)

Query: 21  PSEIVEAPHSFVIHRGLACPYITDLTLDFRRIMEPFTASNLREKRMNRIQDFVCLSSFFH 80
               V  P   V         +   + + R ++ P T+  L  +    ++D V  +   +
Sbjct: 77  ELSGVIDPRILVTTSRDPSSRLGQFSKEIR-LLLP-TSVRLN-RGNLVLEDLVGAAKAQN 133

Query: 81  VSHMGIFNKAST-QLSFKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPL 139
           ++ + + ++      +  +   P GP+L   +H   L  D+    K  +      +  P 
Sbjct: 134 LTDVVLLHEHRGVPTAMTISHFPHGPTLMVSLHNVVLRADIPKSIKGTVS-----ESYPR 188

Query: 140 VIMNNFSGDGKHLKLMATTFQNMFPSINL-ATVNIGTIRRCVLFSYNPDTKLVEMRHY-- 196
           +I   FS      +++    +++FP        N+G   R + F  N DT  +E+RH+  
Sbjct: 189 LIFEGFST-KLGERVVKIL-KHLFPPREPTQKPNVGN--RVITFVNNDDT--IEVRHHVY 242

Query: 197 ------SVQVVPVGLKRAVQ--KIVKGTVPN 219
                 SV++  VG +  ++  KI  GT+ N
Sbjct: 243 VRTSYDSVELSEVGPRFTMKPFKITMGTLDN 273
>emb|CAC01521.1| (AL391034) conserved hypothetical protein [Schizosaccharomyces
           pombe]
          Length = 295

 Score = 40.4 bits (94), Expect = 0.043
 Identities = 28/164 (17%), Positives = 60/164 (36%), Gaps = 22/164 (13%)

Query: 43  TDLTLDFRRIMEPFTASNLREKRMNRIQDFVCLSSFFHVSHMGIF-NKASTQLSFKVVRL 101
             L  D   +M P +  + +    +R+     L+  ++ +++  F ++    L   + R 
Sbjct: 58  RHLLNDLVSMM-PHSKKDSKLDSKDRLYQLNELAELYNCNNIFFFESRRREDLYLHIARA 116

Query: 102 PRGPSLTFKVH------QFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLM 155
           P GP++ F V       +  +  + +  S+  +  +  F  AP            HLK++
Sbjct: 117 PNGPTVKFHVENLHTMDELNMTGNALKGSRPILSFDKTFDTAP------------HLKVV 164

Query: 156 ATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHYSVQ 199
               Q  F     A  +   I R    +       +  R+Y ++
Sbjct: 165 KELLQQTFGIPKGARRSKPFIDRVCTLTI--ADGKIWFRNYEIR 206
 Score = 37.7 bits (87), Expect = 0.26
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 258 KGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLY 295
           + N +  K  + L EIGPR  M +I I EG   G V+Y
Sbjct: 206 RENEDKSKDPVTLIEIGPRFVMTIINILEGSFGGPVIY 243
>emb|CAB55338.1| (AJ006754) hypothetical protein [Yarrowia lipolytica]
          Length = 333

 Score = 37.3 bits (86), Expect = 0.35
 Identities = 20/91 (21%), Positives = 41/91 (44%), Gaps = 10/91 (10%)

Query: 75  LSSFFHVSHMGIFNKASTQLS-FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDH 133
           + +    + + + N+   +++    + LP GP++ F V    + +++    +        
Sbjct: 176 MCAERDYTDLVVINEDKKKVNGLTFIHLPEGPTMYFSVSSLKMPKEIKGHGRSTT----- 230

Query: 134 FKHAPLVIMNNFSGDGKHLKLMATTFQNMFP 164
             H P +I+NNFS      K +   FQ+MFP
Sbjct: 231 --HIPELILNNFSTRLG--KTVGRLFQSMFP 257
>gb|AAF53162.1| (AE003635) CG6712 gene product [Drosophila melanogaster]
          Length = 394

 Score = 36.9 bits (85), Expect = 0.47
 Identities = 17/52 (32%), Positives = 25/52 (47%), Gaps = 6/52 (11%)

Query: 96  FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSG 147
             V+ LP GP+  FK+    L  D+      +    +  KH P VI+NNF+ 
Sbjct: 251 LLVIHLPNGPTAHFKLSNVKLTSDI------KRDHKEITKHRPEVILNNFTT 296
>sp|P32113|COPA_ENTHR COPPER/POTASSIUM-TRANSPORTING ATPASE A
 pir||A45995 copper-transporting ATPase (EC 3.6.1.-) copA - Enterococcus hirae
 gb|AAA61835.1| (L13292) ATPase [Enterococcus hirae]
          Length = 727

 Score = 36.9 bits (85), Expect = 0.49
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)

Query: 250 VLAQTLKSKGNLEDKKSSIKLHEIGPRLTMQLIKIEEGLLTGEVLYHD-HVVKTEDEKET 308
                + +  NL  +K+S+K  +     T +LIK  E +  G +LY + H  K  +EK+T
Sbjct: 30  EQPGVMSATVNLATEKASVKYTDT---TTERLIKSVENIGYGAILYDEAHKQKIAEEKQT 86
>sp|O14180|YDS4_SCHPO HYPOTHETICAL 35.8 KD PROTEIN C4F8.04 IN CHROMOSOME I
 pir||T38834 hypothetical coiled-coil protein - fission yeast
           (Schizosaccharomyces pombe)
 emb|CAB11051.1| (Z98530) hypothetical coiled-coil protein [Schizosaccharomyces
           pombe]
          Length = 306

 Score = 35.4 bits (81), Expect = 1.3
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 13/111 (11%)

Query: 80  HVSHMGIFNKASTQLS-FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAP 138
             + + + N+   + +   +V LP GPS  F +     A+++ +  +          H P
Sbjct: 144 GYTDLLVLNEDRKKTNALTLVHLPNGPSFYFTLSNLQTAKEISNHGRST-------GHIP 196

Query: 139 LVIMNNFSGDGKHLKLMATTFQNMF---PSINLATVNIGTIRRCVLFSYNP 186
            +I+NNFS        +A  FQ++F   P I    V     +R  LF    
Sbjct: 197 ELIINNFSTRLGMT--VARAFQSLFIQTPQIQGRQVVTIHCQRDFLFFRRH 245
>sp|O13823|YEE7_SCHPO HYPOTHETICAL 33.4 KDA PROTEIN C19A8.07C IN CHROMOSOME I
 pir||T37954 hypothetical protein SPAC19A8.07c - fission yeast
           (Schizosaccharomyces pombe)
 emb|CAB11643.1| (Z98974) hypothetical protein [Schizosaccharomyces pombe]
          Length = 289

 Score = 35.0 bits (80), Expect = 1.9
 Identities = 24/102 (23%), Positives = 36/102 (34%), Gaps = 16/102 (15%)

Query: 96  FKVVRLPRGPSLTFKVHQFTLARDVISLSKKQMIDNDHFKHAPLVIMNNFSGDGKHLKLM 155
             +  LP GP+L+F +H   L  D+               +  L+  N  S  GK +K  
Sbjct: 150 LVISHLPYGPTLSFSLHNVVLRHDI------PNTGTMSEAYPHLIFENLTSKLGKRVK-- 201

Query: 156 ATTFQNMFPSINLATVNIGTIRRCVLFSYNPDTKLVEMRHYS 197
            T    +FP     T       R V F+       +  RH+ 
Sbjct: 202 -TALSALFPPDPKDTT-----PRVVTFA--NTDDYISFRHHI 235
>emb|CAB71230.1| (AL049768) possible BING4-related protein. [Leishmania major]
          Length = 680

 Score = 35.0 bits (80), Expect = 1.9
 Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 9/85 (10%)

Query: 329 ENRARNLKLKKDEKWAAKRAAEGRTDSDPEDDAEYYKEEVG--EEPDEELFKMEAKSSRK 386
           EN   N K +   +   +RA++   ++ P          VG  EE DEEL   EA  +++
Sbjct: 477 ENLRLNRKARAIREKKMRRASKSLGEAAPTGLL------VGRDEEVDEELGYKEAPKTKE 530

Query: 387 RPSLGGGMKYKNKRAKLDTKDKNDK 411
             S    ++ + K AK D KD  DK
Sbjct: 531 VKSR-QELQRERKMAKWDKKDSADK 554
CPU time:    49.32 user secs.	    1.61 sys. secs	   50.93 total secs.

  Database: nr
    Posted date:  Feb 10, 2001  7:10 PM
  Number of letters in database: 195,544,254
  Number of sequences in database:  618,844
  
Lambda     K      H
   0.312    0.167    0.486 

Gapped
Lambda     K      H
   0.270   0.0587    0.230 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153956271
Number of Sequences: 618844
Number of extensions: 5792420
Number of successful extensions: 20058
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 19486
Number of HSP's gapped (non-prelim): 477
length of query: 460
length of database: 195,544,254
effective HSP length: 60
effective length of query: 400
effective length of database: 158,413,614
effective search space: 63365445600
effective search space used: 63365445600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.0 bits)
S2: 74 (32.9 bits)