HumanPRENbase
Database of Prenylated Human
Proteins and their Orthologues

Protein CaaX Farnesylation, CaaX Geranylgeranylation and Rab Geranylgeranylation


CLUSTER parameter selection

REQUIRE one of the features for at least one member of listed clusters:
Status-KNOWN Status-LIKELY Status-NEW Mammalia Insecta
EXCLUDE clusters with the following features for at least one member:
Status-OUT-OF-CONTEXT
Other features for cluster members are ALLOWED.
Minimum cluster-size: 1

SEQUENCE parameter selection

INCLUDE entries with the following features:
FT-substrate(s) Viruses Mammalia Aves Amphibia Fishes Insecta Nematoda Fungi Plants Other-Eukaryota
EXCLUDE entries with the following features:
GGT1-substrate(s) GGT2-substrate(s) Synthetic-constructs
Ranked by evOluation of cluster after selection

Querycode: Hcs2220ce111ct11112111211111cm1se200st00202222222221r3 (save for easy recovery of the identical query parameters)
 Clusters  Selected Sequences
General Information Stats Stats Enzyme Taxonomic Kingdom Taxonomic Detail Eukaryota
Status Rank ClustID Name Pren Total PC EvO Number PC EvO FT GGT1 GGT2 Viruses Synthetic Eukaryota Mammalia Birds Amphibia Fishes Insecta Nematoda Fungi Plants Other
+ 1 4505783
(2 isoinpas)
phosphorylase kinase, beta 13 19 4.583 8.895 13
Explore
4.583 8.895 13 0 0 0 0 13 6 1 0 1 3 2 0 0 0
+ 2 7706359
(3 isoinpas)
DEXRAS1, dexamethasone-induced RAS 1, RASD1 12 12 6.000 12.000 10
Explore
5.000 8.333 10 0 0 0 0 10 4 1 1 2 1 1 0 0 0
+ 3 4092830
(2 isoinpas)
DEXRAS2, RASD2, Rhes 7 7 2.333 7.000 7
Explore
2.333 7.000 7 0 0 0 0 7 4 1 1 0 1 0 0 0 0
+ 4 38524620
(no isoinpas)
prickle-like 2 10 12 3.333 8.333 9
Explore
3.000 6.750 9 0 0 0 0 9 4 0 0 2 2 1 0 0 0
? 5 21956647
(4 isoinpas)
ubiquitin specific protease 32 9 11 2.667 7.364 8
Explore
2.333 5.818 8 0 0 0 0 8 4 1 0 1 2 0 0 0 0
+ 6 4758994
(2 isoinpas)
RAB28, member RAS oncogene family isoform 2 5 5 1.250 5.000 5
Explore
1.250 5.000 5 0 0 0 0 5 2 0 0 0 1 2 0 0 0
? 7 45501001
(4 isoinpas)
EHBP1 - EH domain binding protein 1 7 11 1.167 4.455 7
Explore
1.167 4.455 7 0 0 0 0 7 4 0 0 0 3 0 0 0 0
* 8 21758015
(6 isoinpas)
DnaJA4 - DnaJ/Hsp40 homolog, subfamily A, member 4 10 25 5.000 4.000 10
Explore
5.000 4.000 10 0 0 1 0 9 5 1 0 0 1 1 0 0 1
? 9 12314158
(3 isoinpas)
DUF1339, possibly integral membrane protein 11 21 3.667 5.762 9
Explore
3.000 3.857 9 0 0 0 0 9 4 1 0 1 3 0 0 0 0
* 10 38327539
(2 isoinpas)
72kDa inositol polyphosphate-5-phosphatase E 5 7 1.250 3.571 5
Explore
1.250 3.571 5 0 0 0 0 5 2 1 0 0 2 0 0 0 0

Your query selected 83 sequences in 10 clusters.