| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Hs | Mm | |
| pfam03171 | 5 | 0 | 0 | 0 | 0 | 2 | 17 | 4 | 2 | 10 | 110 | 71 | 0 | 2 | 16 | 5 | 1 | 0 | 8 | 5 | 7 | 5 | 33 | 13 | 14 | 11 | 2OG-FeII_Oxy |
| smart00474 | 5 | 0 | 0 | 2 | 1 | 4 | 4 | 2 | 4 | 2 | 20 | 13 | 0 | 1 | 2 | 3 | 1 | 1 | 11 | 5 | 2 | 5 | 9 | 5 | 12 | 6 | 35EXOc |
| pfam00004 | 47 | 10 | 3 | 32 | 21 | 37 | 76 | 81 | 55 | 48 | 125 | 86 | 22 | 39 | 46 | 47 | 40 | 38 | 52 | 60 | 71 | 55 | 77 | 47 | 83 | 58 | AAA |
| pfam00696 | 3 | 0 | 1 | 0 | 1 | 2 | 0 | 0 | 1 | 7 | 12 | 12 | 0 | 3 | 3 | 3 | 4 | 4 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | 1 | AA_kinase |
| pfam03109 | 4 | 0 | 1 | 2 | 2 | 5 | 7 | 8 | 5 | 7 | 17 | 11 | 0 | 4 | 4 | 4 | 3 | 3 | 3 | 3 | 3 | 4 | 3 | 2 | 9 | 7 | ABC1 |
| pfam01842 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 17 | 10 | 0 | 1 | 3 | 3 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 2 | ACT |
| pfam01786 | 1 | 0 | 0 | 0 | 1 | 0 | 2 | 1 | 1 | 4 | 7 | 9 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | AOX |
| pfam00006 | 4 | 0 | 0 | 4 | 3 | 4 | 9 | 6 | 6 | 6 | 10 | 14 | 2 | 4 | 5 | 4 | 4 | 4 | 8 | 5 | 6 | 9 | 8 | 4 | 9 | 8 | ATP-synt_ab |
| pfam00561 | 26 | 0 | 0 | 9 | 2 | 5 | 15 | 13 | 11 | 15 | 102 | 60 | 1 | 12 | 26 | 18 | 19 | 19 | 31 | 29 | 15 | 30 | 44 | 29 | 39 | 40 | Abhydrolase_1 |
| pfam02230 | 2 | 0 | 0 | 0 | 2 | 3 | 4 | 4 | 2 | 1 | 13 | 10 | 0 | 2 | 3 | 1 | 1 | 1 | 1 | 1 | 3 | 3 | 2 | 1 | 4 | 4 | Abhydrolase_2 |
| pfam05641 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 25 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 5 | Agenet |
| smart00656 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 25 | 12 | 0 | 0 | 8 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Amb_all |
| pfam00155 | 13 | 0 | 1 | 3 | 0 | 7 | 9 | 22 | 7 | 12 | 40 | 30 | 1 | 10 | 20 | 8 | 10 | 12 | 18 | 14 | 12 | 13 | 18 | 15 | 21 | 19 | Aminotran_1_2 |
| pfam00026 | 4 | 0 | 0 | 11 | 3 | 4 | 0 | 0 | 0 | 3 | 56 | 60 | 0 | 2 | 10 | 19 | 10 | 17 | 23 | 29 | 1 | 1 | 15 | 3 | 18 | 12 | Asp |
| pfam03547 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 2 | 1 | 24 | 18 | 0 | 2 | 2 | 1 | 6 | 5 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | Auxin_eff |
| smart00338 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 8 | 4 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 4 | 0 | 0 | 2 | 1 | 1 | 0 | BRLZ |
| smart00672 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 33 | 10 | 5 | 0 | 0 | 4 | 4 | 0 | 0 | 0 | 0 | 3 | 1 | 3 | 3 | 7 | 7 | CAP10 |
| pfam00808 | 7 | 0 | 0 | 3 | 2 | 0 | 2 | 2 | 0 | 3 | 24 | 20 | 3 | 5 | 4 | 5 | 5 | 3 | 5 | 4 | 6 | 7 | 8 | 7 | 7 | 10 | CBFD_NFYB_HMF |
| pfam03765 | 2 | 0 | 0 | 0 | 1 | 1 | 0 | 4 | 2 | 1 | 23 | 14 | 0 | 3 | 4 | 4 | 6 | 5 | 1 | 1 | 4 | 6 | 4 | 4 | 8 | 4 | CRAL_TRIO_N |
| pfam03638 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 11 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 2 | 0 | 1 | 2 | 2 | 4 | 1 | CXC |
| pfam01544 | 4 | 0 | 0 | 0 | 1 | 2 | 3 | 6 | 2 | 6 | 20 | 9 | 0 | 3 | 8 | 7 | 7 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | CorA |
| pfam00166 | 2 | 0 | 0 | 3 | 1 | 3 | 4 | 0 | 2 | 5 | 5 | 12 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 0 | 1 | 2 | Cpn10 |
| pfam00394 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 40 | 26 | 0 | 1 | 8 | 10 | 3 | 3 | 1 | 1 | 9 | 6 | 8 | 1 | 2 | 2 | Cu-oxidase |
| pfam00190 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 52 | 58 | 0 | 0 | 9 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Cupin |
| pfam02984 | 2 | 0 | 0 | 0 | 1 | 0 | 1 | 4 | 2 | 4 | 24 | 20 | 1 | 5 | 2 | 3 | 6 | 6 | 6 | 2 | 4 | 6 | 9 | 5 | 12 | 12 | Cyclin_C |
| pfam01965 | 4 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 10 | 10 | 0 | 6 | 4 | 3 | 4 | 1 | 2 | 2 | 0 | 1 | 2 | 3 | 3 | 2 | DJ-1_PfpI |
| pfam01595 | 0 | 0 | 0 | 1 | 1 | 0 | 3 | 3 | 4 | 4 | 10 | 5 | 0 | 1 | 2 | 1 | 1 | 1 | 5 | 5 | 0 | 3 | 0 | 3 | 3 | 4 | DUF21 |
| pfam04577 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 26 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 4 | 1 | 1 | 3 | 2 | 2 | DUF563 |
| pfam00892 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 13 | 6 | 0 | 0 | 2 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 3 | 4 | 1 | DUF6 |
| pfam04749 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 4 | 5 | 15 | 18 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 3 | 3 | DUF614 |
| pfam04827 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 11 | 66 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 3 | 0 | 0 | DUF635 |
| pfam05970 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 28 | 51 | 0 | 0 | 1 | 1 | 0 | 1 | 8 | 1 | 1 | 16 | 1 | 0 | 0 | 0 | DUF889 |
| smart00478 | 3 | 0 | 0 | 3 | 2 | 4 | 4 | 5 | 3 | 3 | 12 | 8 | 2 | 4 | 5 | 5 | 4 | 4 | 1 | 1 | 3 | 2 | 2 | 4 | 5 | 5 | ENDO3c |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Hs | Mm | |
| pfam01417 | 3 | 0 | 1 | 0 | 1 | 1 | 2 | 3 | 2 | 1 | 24 | 15 | 0 | 4 | 3 | 4 | 8 | 7 | 9 | 7 | 4 | 5 | 10 | 5 | 12 | 13 | ENTH |
| pfam01370 | 10 | 0 | 1 | 2 | 2 | 3 | 7 | 14 | 2 | 13 | 44 | 29 | 0 | 5 | 7 | 6 | 3 | 3 | 10 | 9 | 15 | 13 | 10 | 11 | 9 | 10 | Epimerase |
| pfam03081 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 27 | 31 | 0 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 0 | 4 | 1 | 1 | 3 | 2 | Exo70 |
| pfam00117 | 8 | 0 | 0 | 5 | 2 | 5 | 5 | 6 | 3 | 4 | 24 | 15 | 1 | 9 | 8 | 9 | 9 | 8 | 4 | 5 | 13 | 6 | 8 | 3 | 7 | 3 | GATase |
| pfam00462 | 5 | 0 | 0 | 3 | 2 | 3 | 8 | 7 | 4 | 7 | 37 | 23 | 3 | 5 | 3 | 1 | 7 | 3 | 6 | 3 | 4 | 3 | 7 | 8 | 8 | 8 | Glutaredoxin |
| smart00633 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 14 | 10 | 0 | 0 | 5 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | Glyco_10 |
| pfam00232 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 47 | 30 | 0 | 0 | 3 | 1 | 0 | 0 | 2 | 2 | 3 | 6 | 1 | 10 | 14 | 10 | Glyco_hydro_1 |
| pfam00331 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 14 | 10 | 0 | 0 | 4 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Glyco_hydro_10 |
| pfam00722 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 33 | 21 | 0 | 1 | 8 | 12 | 3 | 3 | 0 | 0 | 0 | 5 | 2 | 3 | 0 | 0 | Glyco_hydro_16 |
| pfam00332 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 50 | 64 | 0 | 0 | 2 | 2 | 3 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Glyco_hydro_17 |
| pfam00182 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 14 | 12 | 1 | 0 | 0 | 0 | 0 | 0 | 6 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | Glyco_hydro_19 |
| pfam00295 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 75 | 42 | 0 | 0 | 11 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Glyco_hydro_28 |
| pfam00759 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 29 | 21 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 12 | 2 | 0 | Glyco_hydro_9 |
| pfam00982 | 4 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 11 | 9 | 2 | 5 | 3 | 3 | 3 | 4 | 2 | 2 | 1 | 1 | 1 | 0 | 0 | 0 | Glyco_transf_20 |
| pfam01501 | 1 | 0 | 0 | 0 | 1 | 1 | 2 | 5 | 0 | 3 | 42 | 30 | 0 | 4 | 5 | 3 | 2 | 1 | 9 | 8 | 6 | 3 | 4 | 8 | 17 | 12 | Glyco_transf_8 |
| pfam00534 | 7 | 0 | 0 | 1 | 4 | 5 | 6 | 8 | 7 | 13 | 31 | 37 | 1 | 9 | 6 | 7 | 4 | 4 | 5 | 8 | 1 | 6 | 6 | 6 | 11 | 6 | Glycos_transf_1 |
| smart00428 | 5 | 2 | 0 | 3 | 2 | 2 | 8 | 4 | 3 | 35 | 9 | 14 | 2 | 3 | 2 | 2 | 3 | 2 | 10 | 12 | 6 | 13 | 5 | 6 | 14 | 8 | H3 |
| pfam00403 | 6 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 1 | 0 | 33 | 26 | 0 | 1 | 7 | 7 | 2 | 1 | 3 | 3 | 9 | 8 | 3 | 5 | 14 | 13 | HMA |
| smart00415 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 25 | 21 | 3 | 2 | 3 | 2 | 5 | 4 | 3 | 0 | 1 | 1 | 1 | 2 | 6 | 4 | HSF |
| pfam00447 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 24 | 21 | 3 | 2 | 3 | 2 | 6 | 4 | 2 | 1 | 1 | 1 | 1 | 2 | 6 | 5 | HSF_DNA-bind |
| pfam02689 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 2 | 1 | 1 | 7 | 10 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 1 | 1 | 2 | Herpes_Helicase |
| pfam01715 | 3 | 0 | 0 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 8 | 11 | 0 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | 3 | 3 | 1 | 1 | 1 | 4 | IPPT |
| pfam01419 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 129 | 23 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 6 | Jacalin |
| pfam00657 | 2 | 0 | 1 | 0 | 0 | 0 | 2 | 6 | 0 | 2 | 75 | 49 | 0 | 1 | 7 | 7 | 1 | 1 | 9 | 8 | 7 | 7 | 1 | 4 | 7 | 4 | Lipase_GDSL |
| pfam02847 | 3 | 0 | 0 | 2 | 2 | 4 | 1 | 1 | 1 | 3 | 21 | 12 | 0 | 2 | 2 | 1 | 2 | 1 | 2 | 2 | 3 | 4 | 8 | 4 | 11 | 8 | MA3 |
| smart00544 | 4 | 0 | 0 | 2 | 3 | 5 | 3 | 3 | 2 | 4 | 21 | 14 | 0 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 5 | 9 | 5 | 11 | 8 | MA3 |
| smart00432 | 4 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 88 | 46 | 1 | 3 | 1 | 1 | 4 | 5 | 2 | 2 | 3 | 2 | 4 | 2 | 5 | 11 | MADS |
| pfam03999 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 11 | 13 | 0 | 1 | 1 | 1 | 2 | 1 | 0 | 0 | 2 | 2 | 3 | 2 | 3 | 5 | MAP65_ASE1 |
| pfam00230 | 5 | 0 | 0 | 1 | 0 | 1 | 4 | 7 | 5 | 2 | 39 | 29 | 1 | 1 | 5 | 1 | 4 | 4 | 12 | 6 | 11 | 10 | 10 | 6 | 20 | 12 | MIP |
| pfam01554 | 3 | 0 | 0 | 0 | 0 | 0 | 5 | 10 | 2 | 4 | 81 | 29 | 0 | 4 | 4 | 5 | 4 | 4 | 0 | 0 | 0 | 1 | 0 | 0 | 6 | 3 | MatE |
| pfam03083 | 4 | 0 | 0 | 2 | 0 | 2 | 0 | 4 | 3 | 4 | 30 | 24 | 0 | 0 | 0 | 0 | 0 | 0 | 11 | 9 | 4 | 9 | 4 | 4 | 4 | 2 | MtN3_slv |
| pfam00249 | 25 | 0 | 1 | 2 | 7 | 5 | 2 | 2 | 1 | 19 | 340 | 216 | 6 | 7 | 15 | 9 | 13 | 13 | 7 | 7 | 7 | 7 | 15 | 12 | 42 | 33 | Myb_DNA-binding |
| pfam00931 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 176 | 238 | 0 | 0 | 10 | 2 | 0 | 0 | 1 | 1 | 0 | 0 | 2 | 0 | 1 | 2 | NB-ARC |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Hs | Mm | |
| pfam02136 | 2 | 0 | 0 | 1 | 2 | 2 | 5 | 4 | 3 | 2 | 15 | 8 | 0 | 3 | 4 | 2 | 2 | 2 | 3 | 3 | 5 | 7 | 5 | 2 | 8 | 7 | NTF2 |
| pfam00483 | 4 | 0 | 0 | 1 | 2 | 3 | 2 | 4 | 1 | 7 | 15 | 10 | 2 | 4 | 2 | 2 | 2 | 3 | 4 | 3 | 3 | 2 | 4 | 5 | 5 | 2 | NTP_transferase |
| pfam01566 | 3 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 4 | 8 | 14 | 0 | 2 | 1 | 2 | 5 | 4 | 6 | 2 | 1 | 1 | 1 | 2 | 7 | 5 | Nramp |
| pfam03169 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 26 | 27 | 0 | 3 | 9 | 12 | 4 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | OPT |
| pfam02225 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 53 | 29 | 0 | 2 | 4 | 3 | 4 | 2 | 5 | 5 | 2 | 4 | 5 | 11 | 22 | 18 | PA |
| pfam02887 | 0 | 0 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 9 | 12 | 5 | 0 | 1 | 1 | 1 | 2 | 2 | 4 | 3 | 2 | 1 | 4 | 1 | 4 | 2 | PK_C |
| pfam00481 | 13 | 0 | 0 | 12 | 12 | 27 | 16 | 18 | 13 | 26 | 79 | 83 | 0 | 7 | 8 | 6 | 8 | 8 | 15 | 16 | 9 | 17 | 15 | 10 | 27 | 22 | PP2C |
| smart00331 | 5 | 0 | 0 | 1 | 3 | 6 | 6 | 10 | 4 | 9 | 25 | 26 | 0 | 1 | 2 | 2 | 3 | 3 | 4 | 4 | 1 | 4 | 12 | 3 | 9 | 9 | PP2C_SIG |
| smart00332 | 19 | 0 | 0 | 15 | 15 | 40 | 23 | 23 | 15 | 33 | 93 | 95 | 0 | 7 | 9 | 7 | 9 | 8 | 17 | 17 | 11 | 18 | 18 | 10 | 31 | 25 | PP2Cc |
| pfam01535 | 0 | 0 | 0 | 0 | 0 | 5 | 1 | 1 | 3 | 12 | 1184 | 703 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | PPR |
| pfam00854 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 58 | 74 | 1 | 1 | 4 | 4 | 1 | 1 | 3 | 4 | 2 | 3 | 8 | 4 | 10 | 8 | PTR2 |
| pfam00806 | 3 | 0 | 0 | 0 | 0 | 3 | 0 | 2 | 0 | 3 | 33 | 26 | 0 | 2 | 2 | 4 | 5 | 3 | 7 | 7 | 4 | 3 | 6 | 7 | 13 | 8 | PUF |
| pfam00544 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 25 | 11 | 0 | 0 | 7 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Pec_lyase_C |
| pfam02902 | 3 | 0 | 0 | 1 | 2 | 4 | 1 | 3 | 1 | 4 | 81 | 197 | 1 | 4 | 4 | 4 | 2 | 2 | 5 | 3 | 5 | 4 | 10 | 12 | 13 | 15 | Peptidase_C48 |
| pfam00450 | 3 | 0 | 0 | 0 | 0 | 0 | 3 | 3 | 1 | 11 | 56 | 53 | 0 | 3 | 5 | 4 | 3 | 2 | 17 | 23 | 4 | 5 | 7 | 4 | 4 | 5 | Peptidase_S10 |
| pfam00461 | 2 | 0 | 2 | 1 | 0 | 1 | 2 | 1 | 1 | 3 | 10 | 9 | 1 | 3 | 3 | 1 | 3 | 3 | 2 | 4 | 2 | 4 | 4 | 3 | 6 | 5 | Peptidase_S26 |
| pfam00082 | 12 | 0 | 0 | 2 | 0 | 9 | 3 | 4 | 0 | 13 | 81 | 58 | 2 | 5 | 4 | 8 | 4 | 6 | 9 | 9 | 23 | 8 | 9 | 8 | 19 | 13 | Peptidase_S8 |
| pfam04185 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 5 | 0 | 0 | 5 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Phosphoesterase |
| smart00025 | 10 | 0 | 0 | 3 | 0 | 7 | 18 | 17 | 21 | 5 | 61 | 54 | 3 | 20 | 18 | 17 | 15 | 13 | 31 | 16 | 8 | 7 | 8 | 11 | 32 | 16 | Pumilio |
| pfam00719 | 1 | 0 | 0 | 1 | 1 | 1 | 4 | 4 | 2 | 3 | 6 | 10 | 1 | 2 | 2 | 3 | 2 | 2 | 1 | 1 | 1 | 4 | 1 | 1 | 3 | 2 | Pyrophosphatase |
| pfam03732 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 92 | 1425 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 1 | 2 | 4 | 0 | 4 | 5 | Retrotrans_gag |
| smart00717 | 33 | 0 | 3 | 4 | 12 | 9 | 5 | 6 | 3 | 26 | 345 | 217 | 10 | 12 | 21 | 17 | 18 | 16 | 24 | 14 | 23 | 17 | 32 | 21 | 69 | 59 | SANT |
| smart00463 | 4 | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 0 | 1 | 10 | 15 | 0 | 2 | 2 | 2 | 2 | 2 | 6 | 0 | 0 | 1 | 3 | 0 | 1 | 0 | SMR |
| pfam03105 | 5 | 0 | 2 | 2 | 1 | 3 | 1 | 5 | 1 | 4 | 27 | 15 | 2 | 6 | 6 | 7 | 15 | 9 | 1 | 1 | 1 | 4 | 5 | 1 | 3 | 3 | SPX |
| smart00466 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 3 | 17 | 7 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 4 | SRA |
| pfam00319 | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 78 | 37 | 1 | 3 | 1 | 1 | 4 | 5 | 2 | 2 | 3 | 2 | 4 | 2 | 5 | 11 | SRF-TF |
| smart00151 | 1 | 0 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 2 | 21 | 8 | 1 | 2 | 2 | 2 | 2 | 2 | 3 | 3 | 2 | 2 | 3 | 1 | 5 | 6 | SWIB |
| pfam01641 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 5 | 8 | 4 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 2 | 2 | 4 | 3 | SelR |
| pfam03145 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | 12 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 3 | 5 | 1 | 5 | 3 | Sina |
| smart00205 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 28 | 24 | 0 | 0 | 0 | 2 | 1 | 0 | 7 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | THN |
| pfam00314 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 26 | 21 | 0 | 0 | 0 | 2 | 0 | 0 | 7 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | Thaumatin |
| pfam02458 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 66 | 97 | 0 | 0 | 10 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Transferase |
| pfam01609 | 1 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 5 | 26 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 1 | 1 | 1 | 0 | Transposase_11 |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Hs | Mm | |
| pfam02358 | 2 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 3 | 21 | 16 | 1 | 4 | 2 | 2 | 2 | 3 | 0 | 0 | 1 | 2 | 3 | 0 | 0 | 0 | Trehalose_PPase |
| pfam04564 | 5 | 0 | 0 | 1 | 1 | 1 | 3 | 4 | 4 | 17 | 55 | 55 | 1 | 1 | 2 | 1 | 1 | 1 | 4 | 2 | 3 | 5 | 7 | 6 | 9 | 10 | U-box |
| smart00504 | 8 | 0 | 0 | 4 | 2 | 4 | 8 | 10 | 7 | 21 | 66 | 65 | 1 | 4 | 5 | 3 | 2 | 4 | 7 | 5 | 8 | 10 | 17 | 13 | 27 | 30 | Ubox |
| pfam00582 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 24 | 18 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | Usp |
| pfam02182 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 17 | 6 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 4 | YDG_SRA |
| pfam04146 | 0 | 0 | 0 | 2 | 0 | 2 | 0 | 0 | 0 | 1 | 13 | 19 | 0 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 3 | 2 | 6 | 2 | 6 | 8 | YTH |
| smart00614 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 19 | 75 | 0 | 0 | 0 | 0 | 1 | 0 | 6 | 3 | 1 | 5 | 11 | 3 | 7 | 7 | ZnF_BED |
| smart00343 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 31 | 409 | 0 | 1 | 3 | 0 | 1 | 0 | 9 | 1 | 3 | 6 | 1 | 6 | 29 | 17 | ZnF_C2HC |
| smart00551 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 15 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 2 | 3 | 4 | 4 | 2 | 7 | 5 | ZnF_TAZ |
| smart00597 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 7 | 13 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 5 | 5 | 3 | ZnF_TTF |
| pfam05699 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 37 | 119 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 1 | 0 | 15 | 1 | 14 | 4 | 4 | hATC |
| pfam02536 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 37 | 20 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 4 | 1 | 3 | 5 | mTERF |
| pfam00067 | 65 | 0 | 0 | 0 | 0 | 1 | 4 | 5 | 4 | 45 | 271 | 277 | 0 | 2 | 125 | 39 | 3 | 4 | 79 | 97 | 125 | 132 | 103 | 95 | 108 | 112 | p450 |
| pfam00141 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 6 | 81 | 130 | 0 | 0 | 3 | 5 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | peroxidase |
| pfam00348 | 5 | 0 | 0 | 2 | 2 | 3 | 3 | 5 | 3 | 4 | 18 | 11 | 1 | 3 | 8 | 3 | 3 | 3 | 2 | 2 | 4 | 5 | 6 | 3 | 7 | 5 | polyprenyl_synt |
| pfam00665 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 27 | 144 | 1767 | 0 | 3 | 21 | 0 | 36 | 1 | 22 | 10 | 3 | 38 | 24 | 65 | 25 | 16 | rve |
| pfam01428 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 7 | 9 | 1 | 0 | 0 | 0 | 1 | 1 | 2 | 2 | 3 | 2 | 1 | 3 | 5 | 2 | zf-AN1 |
| pfam02892 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 17 | 56 | 0 | 0 | 0 | 0 | 1 | 0 | 6 | 4 | 1 | 4 | 7 | 2 | 6 | 6 | zf-BED |
At least one plant within top2:
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Hs | Mm | |
| pfam00244 | 1 | 0 | 0 | 2 | 1 | 4 | 2 | 4 | 2 | 3 | 15 | 7 | 1 | 2 | 3 | 3 | 2 | 2 | 4 | 2 | 9 | 7 | 3 | 9 | 9 | 11 | 14-3-3 |
| smart00101 | 1 | 0 | 0 | 3 | 1 | 4 | 2 | 4 | 2 | 3 | 15 | 7 | 1 | 2 | 3 | 3 | 2 | 2 | 4 | 2 | 9 | 7 | 3 | 9 | 9 | 11 | 14_3_3 |
| pfam03171 | 5 | 0 | 0 | 0 | 0 | 2 | 17 | 4 | 2 | 10 | 110 | 71 | 0 | 2 | 16 | 5 | 1 | 0 | 8 | 5 | 7 | 5 | 33 | 13 | 14 | 11 | 2OG-FeII_Oxy |
| smart00474 | 5 | 0 | 0 | 2 | 1 | 4 | 4 | 2 | 4 | 2 | 20 | 13 | 0 | 1 | 2 | 3 | 1 | 1 | 11 | 5 | 2 | 5 | 9 | 5 | 12 | 6 | 35EXOc |
| pfam00004 | 47 | 10 | 3 | 32 | 21 | 37 | 76 | 81 | 55 | 48 | 125 | 86 | 22 | 39 | 46 | 47 | 40 | 38 | 52 | 60 | 71 | 55 | 77 | 47 | 83 | 58 | AAA |
| pfam00696 | 3 | 0 | 1 | 0 | 1 | 2 | 0 | 0 | 1 | 7 | 12 | 12 | 0 | 3 | 3 | 3 | 4 | 4 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | 1 | AA_kinase |
| pfam03109 | 4 | 0 | 1 | 2 | 2 | 5 | 7 | 8 | 5 | 7 | 17 | 11 | 0 | 4 | 4 | 4 | 3 | 3 | 3 | 3 | 3 | 4 | 3 | 2 | 9 | 7 | ABC1 |
| pfam01842 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 17 | 10 | 0 | 1 | 3 | 3 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 2 | ACT |
| pfam04548 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 22 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 13 | 10 | AIG1 |
| pfam01786 | 1 | 0 | 0 | 0 | 1 | 0 | 2 | 1 | 1 | 4 | 7 | 9 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | AOX |
| pfam00006 | 4 | 0 | 0 | 4 | 3 | 4 | 9 | 6 | 6 | 6 | 10 | 14 | 2 | 4 | 5 | 4 | 4 | 4 | 8 | 5 | 6 | 9 | 8 | 4 | 9 | 8 | ATP-synt_ab |
| pfam00561 | 26 | 0 | 0 | 9 | 2 | 5 | 15 | 13 | 11 | 15 | 102 | 60 | 1 | 12 | 26 | 18 | 19 | 19 | 31 | 29 | 15 | 30 | 44 | 29 | 39 | 40 | Abhydrolase_1 |
| pfam02230 | 2 | 0 | 0 | 0 | 2 | 3 | 4 | 4 | 2 | 1 | 13 | 10 | 0 | 2 | 3 | 1 | 1 | 1 | 1 | 1 | 3 | 3 | 2 | 1 | 4 | 4 | Abhydrolase_2 |
| pfam05641 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 25 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 5 | Agenet |
| pfam02738 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 6 | 7 | 0 | 0 | 2 | 1 | 0 | 0 | 3 | 21 | 2 | 7 | 7 | 4 | 2 | 5 | Ald_Xan_dh_C2 |
| smart00656 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 25 | 12 | 0 | 0 | 8 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Amb_all |
| pfam01425 | 4 | 0 | 0 | 1 | 0 | 0 | 2 | 4 | 1 | 4 | 7 | 19 | 0 | 4 | 22 | 9 | 3 | 2 | 13 | 12 | 4 | 6 | 11 | 5 | 7 | 4 | Amidase |
| pfam00155 | 13 | 0 | 1 | 3 | 0 | 7 | 9 | 22 | 7 | 12 | 40 | 30 | 1 | 10 | 20 | 8 | 10 | 12 | 18 | 14 | 12 | 13 | 18 | 15 | 21 | 19 | Aminotran_1_2 |
| pfam00202 | 4 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 8 | 9 | 10 | 0 | 7 | 8 | 8 | 4 | 3 | 7 | 5 | 15 | 7 | 6 | 5 | 6 | 6 | Aminotran_3 |
| pfam00909 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 12 | 6 | 11 | 0 | 4 | 5 | 4 | 3 | 3 | 7 | 10 | 5 | 2 | 2 | 5 | 30 | 7 | Ammonium_transp |
| pfam00026 | 4 | 0 | 0 | 11 | 3 | 4 | 0 | 0 | 0 | 3 | 56 | 60 | 0 | 2 | 10 | 19 | 10 | 17 | 23 | 29 | 1 | 1 | 15 | 3 | 18 | 12 | Asp |
| pfam01112 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 10 | 0 | 1 | 2 | 3 | 0 | 0 | 2 | 2 | 4 | 3 | 6 | 3 | 4 | 4 | Asparaginase_2 |
| pfam03547 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 2 | 1 | 24 | 18 | 0 | 2 | 2 | 1 | 6 | 5 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | Auxin_eff |
| pfam01603 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 8 | 7 | 1 | 2 | 1 | 1 | 1 | 1 | 3 | 2 | 5 | 2 | 6 | 3 | 8 | 16 | B56 |
| smart00338 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 8 | 4 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 4 | 0 | 0 | 2 | 1 | 1 | 0 | BRLZ |
| pfam00364 | 7 | 0 | 0 | 2 | 1 | 10 | 9 | 9 | 7 | 7 | 17 | 11 | 0 | 5 | 6 | 6 | 5 | 7 | 7 | 7 | 8 | 6 | 9 | 10 | 19 | 10 | Biotin_lipoyl |
| smart00672 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 33 | 10 | 5 | 0 | 0 | 4 | 4 | 0 | 0 | 0 | 0 | 3 | 1 | 3 | 3 | 7 | 7 | CAP10 |
| pfam00808 | 7 | 0 | 0 | 3 | 2 | 0 | 2 | 2 | 0 | 3 | 24 | 20 | 3 | 5 | 4 | 5 | 5 | 3 | 5 | 4 | 6 | 7 | 8 | 7 | 7 | 10 | CBFD_NFYB_HMF |
| pfam00686 | 6 | 0 | 0 | 0 | 2 | 5 | 0 | 0 | 0 | 10 | 2 | 4 | 0 | 0 | 4 | 2 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 2 | 2 | CBM_20 |
| smart00299 | 11 | 0 | 0 | 5 | 5 | 7 | 10 | 14 | 7 | 8 | 24 | 5 | 1 | 8 | 9 | 10 | 8 | 7 | 9 | 10 | 4 | 9 | 11 | 11 | 16 | 18 | CLH |
| pfam03765 | 2 | 0 | 0 | 0 | 1 | 1 | 0 | 4 | 2 | 1 | 23 | 14 | 0 | 3 | 4 | 4 | 6 | 5 | 1 | 1 | 4 | 6 | 4 | 4 | 8 | 4 | CRAL_TRIO_N |
| pfam03638 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 11 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 2 | 0 | 1 | 2 | 2 | 4 | 1 | CXC |
| pfam01544 | 4 | 0 | 0 | 0 | 1 | 2 | 3 | 6 | 2 | 6 | 20 | 9 | 0 | 3 | 8 | 7 | 7 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | CorA |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Hs | Mm | |
| pfam00166 | 2 | 0 | 0 | 3 | 1 | 3 | 4 | 0 | 2 | 5 | 5 | 12 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 0 | 1 | 2 | Cpn10 |
| pfam00394 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 40 | 26 | 0 | 1 | 8 | 10 | 3 | 3 | 1 | 1 | 9 | 6 | 8 | 1 | 2 | 2 | Cu-oxidase |
| pfam02727 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 8 | 4 | 0 | 2 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 7 | Cu_amine_oxidN2 |
| pfam00190 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 52 | 58 | 0 | 0 | 9 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Cupin |
| pfam02984 | 2 | 0 | 0 | 0 | 1 | 0 | 1 | 4 | 2 | 4 | 24 | 20 | 1 | 5 | 2 | 3 | 6 | 6 | 6 | 2 | 4 | 6 | 9 | 5 | 12 | 12 | Cyclin_C |
| pfam03188 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 6 | 5 | 0 | 0 | 0 | 1 | 0 | 0 | 6 | 3 | 1 | 6 | 12 | 3 | 5 | 4 | Cytochrom_B561 |
| pfam03982 | 1 | 0 | 1 | 0 | 0 | 2 | 3 | 6 | 1 | 5 | 7 | 5 | 0 | 1 | 2 | 1 | 1 | 1 | 5 | 5 | 2 | 2 | 3 | 1 | 13 | 4 | DAGAT |
| pfam01965 | 4 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 10 | 10 | 0 | 6 | 4 | 3 | 4 | 1 | 2 | 2 | 0 | 1 | 2 | 3 | 3 | 2 | DJ-1_PfpI |
| pfam01595 | 0 | 0 | 0 | 1 | 1 | 0 | 3 | 3 | 4 | 4 | 10 | 5 | 0 | 1 | 2 | 1 | 1 | 1 | 5 | 5 | 0 | 3 | 0 | 3 | 3 | 4 | DUF21 |
| pfam04577 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 26 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 4 | 1 | 1 | 3 | 2 | 2 | DUF563 |
| pfam00892 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 13 | 6 | 0 | 0 | 2 | 1 | 2 | 1 | 0 | 0 | 0 | 1 | 1 | 3 | 4 | 1 | DUF6 |
| pfam04749 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 4 | 5 | 15 | 18 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 3 | 3 | DUF614 |
| pfam04827 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 11 | 66 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 3 | 0 | 0 | DUF635 |
| pfam04819 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 9 | DUF716 |
| pfam05705 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 3 | 0 | 0 | 3 | 1 | 0 | 0 | 4 | 3 | 4 | 4 | 4 | 2 | 2 | 4 | DUF829 |
| pfam05970 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 28 | 51 | 0 | 0 | 1 | 1 | 0 | 1 | 8 | 1 | 1 | 16 | 1 | 0 | 0 | 0 | DUF889 |
| pfam03028 | 2 | 0 | 0 | 11 | 2 | 16 | 25 | 19 | 19 | 29 | 0 | 0 | 0 | 2 | 1 | 1 | 1 | 1 | 3 | 5 | 67 | 18 | 17 | 27 | 28 | 13 | Dynein_heavy |
| smart00478 | 3 | 0 | 0 | 3 | 2 | 4 | 4 | 5 | 3 | 3 | 12 | 8 | 2 | 4 | 5 | 5 | 4 | 4 | 1 | 1 | 3 | 2 | 2 | 4 | 5 | 5 | ENDO3c |
| pfam01417 | 3 | 0 | 1 | 0 | 1 | 1 | 2 | 3 | 2 | 1 | 24 | 15 | 0 | 4 | 3 | 4 | 8 | 7 | 9 | 7 | 4 | 5 | 10 | 5 | 12 | 13 | ENTH |
| pfam03124 | 6 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 14 | 3 | 1 | 3 | 2 | 2 | 2 | 2 | 1 | 1 | 3 | 2 | 5 | 1 | 3 | 3 | EXS |
| smart00729 | 5 | 0 | 0 | 3 | 2 | 3 | 7 | 7 | 3 | 9 | 9 | 7 | 1 | 3 | 4 | 4 | 3 | 2 | 6 | 9 | 8 | 7 | 4 | 4 | 15 | 7 | Elp3 |
| pfam01370 | 10 | 0 | 1 | 2 | 2 | 3 | 7 | 14 | 2 | 13 | 44 | 29 | 0 | 5 | 7 | 6 | 3 | 3 | 10 | 9 | 15 | 13 | 10 | 11 | 9 | 10 | Epimerase |
| pfam03081 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 27 | 31 | 0 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 0 | 4 | 1 | 1 | 3 | 2 | Exo70 |
| pfam03372 | 10 | 0 | 0 | 5 | 4 | 7 | 14 | 140 | 9 | 10 | 68 | 101 | 4 | 7 | 15 | 8 | 11 | 10 | 28 | 13 | 11 | 54 | 28 | 27 | 59 | 44 | Exo_endo_phos |
| pfam00646 | 8 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 3 | 213 | 53 | 0 | 3 | 10 | 11 | 3 | 4 | 111 | 6 | 9 | 16 | 13 | 14 | 22 | 20 | F-box |
| pfam01565 | 10 | 0 | 0 | 0 | 0 | 0 | 4 | 5 | 5 | 3 | 44 | 21 | 0 | 2 | 43 | 20 | 4 | 3 | 7 | 6 | 1 | 3 | 3 | 6 | 6 | 9 | FAD_binding_4 |
| pfam03441 | 0 | 0 | 1 | 1 | 0 | 1 | 2 | 2 | 2 | 5 | 5 | 10 | 0 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 3 | 4 | 7 | 0 | 3 | 2 | FAD_binding_7 |
| smart00256 | 16 | 0 | 0 | 0 | 0 | 0 | 4 | 2 | 1 | 2 | 321 | 92 | 0 | 6 | 13 | 12 | 5 | 4 | 149 | 11 | 13 | 23 | 25 | 26 | 32 | 52 | FBOX |
| pfam01070 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 5 | 5 | 0 | 1 | 12 | 4 | 2 | 1 | 1 | 3 | 2 | 2 | 2 | 4 | 2 | 3 | FMN_dh |
| pfam01794 | 4 | 0 | 0 | 0 | 0 | 0 | 3 | 2 | 1 | 5 | 21 | 11 | 0 | 2 | 11 | 10 | 12 | 3 | 2 | 1 | 7 | 4 | 3 | 7 | 14 | 12 | Ferric_reduct |
| pfam00117 | 8 | 0 | 0 | 5 | 2 | 5 | 5 | 6 | 3 | 4 | 24 | 15 | 1 | 9 | 8 | 9 | 9 | 8 | 4 | 5 | 13 | 6 | 8 | 3 | 7 | 3 | GATase |
| pfam02347 | 1 | 0 | 0 | 0 | 0 | 0 | 2 | 39 | 1 | 1 | 4 | 2 | 0 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 2 | 2 | 1 | 4 | 2 | GDC-P |
| pfam00462 | 5 | 0 | 0 | 3 | 2 | 3 | 8 | 7 | 4 | 7 | 37 | 23 | 3 | 5 | 3 | 1 | 7 | 3 | 6 | 3 | 4 | 3 | 7 | 8 | 8 | 8 | Glutaredoxin |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Hs | Mm | |
| smart00633 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 14 | 10 | 0 | 0 | 5 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | Glyco_10 |
| pfam00232 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 47 | 30 | 0 | 0 | 3 | 1 | 0 | 0 | 2 | 2 | 3 | 6 | 1 | 10 | 14 | 10 | Glyco_hydro_1 |
| pfam00331 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 14 | 10 | 0 | 0 | 4 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Glyco_hydro_10 |
| pfam00722 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 33 | 21 | 0 | 1 | 8 | 12 | 3 | 3 | 0 | 0 | 0 | 5 | 2 | 3 | 0 | 0 | Glyco_hydro_16 |
| pfam00332 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 50 | 64 | 0 | 0 | 2 | 2 | 3 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Glyco_hydro_17 |
| pfam00182 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 14 | 12 | 1 | 0 | 0 | 0 | 0 | 0 | 6 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | Glyco_hydro_19 |
| pfam00295 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 75 | 42 | 0 | 0 | 11 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Glyco_hydro_28 |
| pfam00933 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 12 | 12 | 0 | 1 | 22 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | Glyco_hydro_3 |
| pfam03662 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 7 | 2 | Glyco_hydro_79n |
| pfam00759 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 29 | 21 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 12 | 2 | 0 | Glyco_hydro_9 |
| pfam00982 | 4 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 11 | 9 | 2 | 5 | 3 | 3 | 3 | 4 | 2 | 2 | 1 | 1 | 1 | 0 | 0 | 0 | Glyco_transf_20 |
| pfam03360 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 14 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 5 | 4 | 3 | 3 | 10 | 5 | 7 | Glyco_transf_43 |
| pfam01501 | 1 | 0 | 0 | 0 | 1 | 1 | 2 | 5 | 0 | 3 | 42 | 30 | 0 | 4 | 5 | 3 | 2 | 1 | 9 | 8 | 6 | 3 | 4 | 8 | 17 | 12 | Glyco_transf_8 |
| pfam00534 | 7 | 0 | 0 | 1 | 4 | 5 | 6 | 8 | 7 | 13 | 31 | 37 | 1 | 9 | 6 | 7 | 4 | 4 | 5 | 8 | 1 | 6 | 6 | 6 | 11 | 6 | Glycos_transf_1 |
| pfam02800 | 1 | 0 | 0 | 1 | 1 | 2 | 6 | 12 | 3 | 3 | 7 | 8 | 1 | 2 | 2 | 1 | 3 | 2 | 4 | 4 | 1 | 3 | 4 | 1 | 4 | 7 | Gp_dh_C |
| smart00428 | 5 | 2 | 0 | 3 | 2 | 2 | 8 | 4 | 3 | 35 | 9 | 14 | 2 | 3 | 2 | 2 | 3 | 2 | 10 | 12 | 6 | 13 | 5 | 6 | 14 | 8 | H3 |
| smart00417 | 2 | 1 | 0 | 1 | 1 | 1 | 22 | 10 | 7 | 33 | 1 | 7 | 0 | 2 | 3 | 3 | 1 | 1 | 1 | 11 | 8 | 9 | 1 | 0 | 4 | 4 | H4 |
| pfam00403 | 6 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 1 | 0 | 33 | 26 | 0 | 1 | 7 | 7 | 2 | 1 | 3 | 3 | 9 | 8 | 3 | 5 | 14 | 13 | HMA |
| smart00415 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 25 | 21 | 3 | 2 | 3 | 2 | 5 | 4 | 3 | 0 | 1 | 1 | 1 | 2 | 6 | 4 | HSF |
| pfam00447 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 24 | 21 | 3 | 2 | 3 | 2 | 6 | 4 | 2 | 1 | 1 | 1 | 1 | 2 | 6 | 5 | HSF_DNA-bind |
| pfam00183 | 6 | 1 | 1 | 4 | 3 | 6 | 5 | 11 | 36 | 7 | 13 | 5 | 1 | 2 | 3 | 2 | 6 | 2 | 5 | 6 | 13 | 4 | 8 | 4 | 11 | 13 | HSP90 |
| pfam03030 | 0 | 0 | 0 | 3 | 0 | 2 | 10 | 2 | 1 | 3 | 5 | 16 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | H_PPase |
| pfam02689 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 2 | 1 | 1 | 7 | 10 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 1 | 1 | 2 | Herpes_Helicase |
| pfam00125 | 6 | 3 | 0 | 8 | 6 | 9 | 23 | 7 | 11 | 115 | 31 | 41 | 1 | 7 | 5 | 4 | 6 | 5 | 16 | 46 | 28 | 39 | 9 | 10 | 57 | 47 | Histone |
| pfam03878 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 7 | 3 | Hrf1 |
| pfam01485 | 7 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 2 | 29 | 6 | 0 | 2 | 1 | 2 | 2 | 1 | 13 | 7 | 8 | 6 | 6 | 5 | 15 | 10 | IBR |
| pfam01715 | 3 | 0 | 0 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 8 | 11 | 0 | 2 | 1 | 2 | 1 | 1 | 2 | 2 | 3 | 3 | 1 | 1 | 1 | 4 | IPPT |
| pfam01419 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 129 | 23 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 6 | Jacalin |
| pfam02149 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 6 | 0 | 1 | 1 | 1 | 2 | 2 | 5 | 3 | 4 | 2 | 3 | 2 | 11 | 6 | KA1 |
| pfam00657 | 2 | 0 | 1 | 0 | 0 | 0 | 2 | 6 | 0 | 2 | 75 | 49 | 0 | 1 | 7 | 7 | 1 | 1 | 9 | 8 | 7 | 7 | 1 | 4 | 7 | 4 | Lipase_GDSL |
| pfam00206 | 2 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 5 | 3 | 0 | 5 | 5 | 3 | 3 | 3 | 4 | 2 | 1 | 3 | 10 | 2 | 5 | 4 | Lyase_1 |
| pfam02847 | 3 | 0 | 0 | 2 | 2 | 4 | 1 | 1 | 1 | 3 | 21 | 12 | 0 | 2 | 2 | 1 | 2 | 1 | 2 | 2 | 3 | 4 | 8 | 4 | 11 | 8 | MA3 |
| smart00544 | 4 | 0 | 0 | 2 | 3 | 5 | 3 | 3 | 2 | 4 | 21 | 14 | 0 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 5 | 9 | 5 | 11 | 8 | MA3 |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Hs | Mm | |
| smart00432 | 4 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 88 | 46 | 1 | 3 | 1 | 1 | 4 | 5 | 2 | 2 | 3 | 2 | 4 | 2 | 5 | 11 | MADS |
| pfam03999 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 11 | 13 | 0 | 1 | 1 | 1 | 2 | 1 | 0 | 0 | 2 | 2 | 3 | 2 | 3 | 5 | MAP65_ASE1 |
| smart00061 | 12 | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 2 | 5 | 82 | 19 | 0 | 1 | 1 | 1 | 1 | 1 | 165 | 12 | 3 | 7 | 6 | 11 | 14 | 19 | MATH |
| pfam00917 | 11 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 1 | 3 | 46 | 18 | 0 | 0 | 0 | 1 | 1 | 1 | 157 | 12 | 6 | 7 | 11 | 12 | 15 | 21 | MATH |
| pfam00230 | 5 | 0 | 0 | 1 | 0 | 1 | 4 | 7 | 5 | 2 | 39 | 29 | 1 | 1 | 5 | 1 | 4 | 4 | 12 | 6 | 11 | 10 | 10 | 6 | 20 | 12 | MIP |
| pfam01554 | 3 | 0 | 0 | 0 | 0 | 0 | 5 | 10 | 2 | 4 | 81 | 29 | 0 | 4 | 4 | 5 | 4 | 4 | 0 | 0 | 0 | 1 | 0 | 0 | 6 | 3 | MatE |
| pfam03083 | 4 | 0 | 0 | 2 | 0 | 2 | 0 | 4 | 3 | 4 | 30 | 24 | 0 | 0 | 0 | 0 | 0 | 0 | 11 | 9 | 4 | 9 | 4 | 4 | 4 | 2 | MtN3_slv |
| pfam00249 | 25 | 0 | 1 | 2 | 7 | 5 | 2 | 2 | 1 | 19 | 340 | 216 | 6 | 7 | 15 | 9 | 13 | 13 | 7 | 7 | 7 | 7 | 15 | 12 | 42 | 33 | Myb_DNA-binding |
| pfam01849 | 2 | 0 | 0 | 1 | 2 | 2 | 3 | 2 | 2 | 2 | 7 | 6 | 0 | 2 | 2 | 2 | 3 | 2 | 3 | 2 | 3 | 3 | 6 | 1 | 11 | 6 | NAC |
| pfam00931 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 176 | 238 | 0 | 0 | 10 | 2 | 0 | 0 | 1 | 1 | 0 | 0 | 2 | 0 | 1 | 2 | NB-ARC |
| pfam02136 | 2 | 0 | 0 | 1 | 2 | 2 | 5 | 4 | 3 | 2 | 15 | 8 | 0 | 3 | 4 | 2 | 2 | 2 | 3 | 3 | 5 | 7 | 5 | 2 | 8 | 7 | NTF2 |
| pfam00483 | 4 | 0 | 0 | 1 | 2 | 3 | 2 | 4 | 1 | 7 | 15 | 10 | 2 | 4 | 2 | 2 | 2 | 3 | 4 | 3 | 3 | 2 | 4 | 5 | 5 | 2 | NTP_transferase |
| pfam01566 | 3 | 0 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 4 | 8 | 14 | 0 | 2 | 1 | 2 | 5 | 4 | 6 | 2 | 1 | 1 | 1 | 2 | 7 | 5 | Nramp |
| pfam03169 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 26 | 27 | 0 | 3 | 9 | 12 | 4 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | OPT |
| pfam02225 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 53 | 29 | 0 | 2 | 4 | 3 | 4 | 2 | 5 | 5 | 2 | 4 | 5 | 11 | 22 | 18 | PA |
| pfam02671 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 51 | 6 | 2 | 6 | 2 | 2 | 3 | 3 | 1 | 0 | 5 | 6 | 12 | 3 | 9 | 9 | PAH |
| pfam00291 | 5 | 0 | 0 | 0 | 1 | 3 | 4 | 13 | 4 | 9 | 15 | 25 | 0 | 7 | 15 | 12 | 9 | 6 | 19 | 11 | 2 | 3 | 2 | 11 | 11 | 9 | PALP |
| pfam04926 | 1 | 0 | 0 | 0 | 1 | 1 | 4 | 4 | 2 | 1 | 4 | 8 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 3 | 2 | 1 | 2 | 1 | 6 | 4 | PAP_RNA-bind |
| pfam04928 | 1 | 0 | 0 | 1 | 0 | 1 | 4 | 5 | 2 | 1 | 5 | 10 | 1 | 2 | 1 | 1 | 1 | 1 | 3 | 3 | 2 | 2 | 2 | 1 | 7 | 4 | PAP_central |
| smart00666 | 5 | 0 | 0 | 0 | 0 | 0 | 3 | 2 | 1 | 2 | 35 | 13 | 0 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | 0 | 0 | 2 | 7 | 20 | 14 | PB1 |
| pfam00564 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 30 | 13 | 0 | 2 | 2 | 2 | 2 | 1 | 2 | 2 | 0 | 0 | 2 | 6 | 17 | 13 | PB1 |
| pfam00162 | 1 | 0 | 0 | 2 | 1 | 2 | 5 | 10 | 3 | 3 | 6 | 7 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 3 | 1 | 2 | 3 | PGK |
| pfam02887 | 0 | 0 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 9 | 12 | 5 | 0 | 1 | 1 | 1 | 2 | 2 | 4 | 3 | 2 | 1 | 4 | 1 | 4 | 2 | PK_C |
| pfam01048 | 2 | 0 | 0 | 1 | 0 | 3 | 2 | 1 | 1 | 2 | 6 | 3 | 0 | 0 | 12 | 3 | 0 | 0 | 1 | 1 | 1 | 2 | 4 | 1 | 2 | 3 | PNP_UDP_1 |
| pfam00481 | 13 | 0 | 0 | 12 | 12 | 27 | 16 | 18 | 13 | 26 | 79 | 83 | 0 | 7 | 8 | 6 | 8 | 8 | 15 | 16 | 9 | 17 | 15 | 10 | 27 | 22 | PP2C |
| smart00331 | 5 | 0 | 0 | 1 | 3 | 6 | 6 | 10 | 4 | 9 | 25 | 26 | 0 | 1 | 2 | 2 | 3 | 3 | 4 | 4 | 1 | 4 | 12 | 3 | 9 | 9 | PP2C_SIG |
| smart00332 | 19 | 0 | 0 | 15 | 15 | 40 | 23 | 23 | 15 | 33 | 93 | 95 | 0 | 7 | 9 | 7 | 9 | 8 | 17 | 17 | 11 | 18 | 18 | 10 | 31 | 25 | PP2Cc |
| pfam01535 | 0 | 0 | 0 | 0 | 0 | 5 | 1 | 1 | 3 | 12 | 1184 | 703 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | PPR |
| pfam00854 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 58 | 74 | 1 | 1 | 4 | 4 | 1 | 1 | 3 | 4 | 2 | 3 | 8 | 4 | 10 | 8 | PTR2 |
| pfam00806 | 3 | 0 | 0 | 0 | 0 | 3 | 0 | 2 | 0 | 3 | 33 | 26 | 0 | 2 | 2 | 4 | 5 | 3 | 7 | 7 | 4 | 3 | 6 | 7 | 13 | 8 | PUF |
| pfam00544 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 25 | 11 | 0 | 0 | 7 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Pec_lyase_C |
| pfam02902 | 3 | 0 | 0 | 1 | 2 | 4 | 1 | 3 | 1 | 4 | 81 | 197 | 1 | 4 | 4 | 4 | 2 | 2 | 5 | 3 | 5 | 4 | 10 | 12 | 13 | 15 | Peptidase_C48 |
| pfam05193 | 7 | 0 | 0 | 2 | 7 | 10 | 12 | 11 | 6 | 6 | 15 | 19 | 1 | 8 | 7 | 6 | 8 | 7 | 22 | 6 | 8 | 11 | 11 | 6 | 10 | 8 | Peptidase_M16_C |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Hs | Mm | |
| pfam01434 | 4 | 0 | 0 | 3 | 1 | 3 | 9 | 12 | 6 | 5 | 19 | 10 | 0 | 2 | 2 | 2 | 3 | 3 | 4 | 2 | 3 | 4 | 5 | 3 | 6 | 6 | Peptidase_M41 |
| pfam00450 | 3 | 0 | 0 | 0 | 0 | 0 | 3 | 3 | 1 | 11 | 56 | 53 | 0 | 3 | 5 | 4 | 3 | 2 | 17 | 23 | 4 | 5 | 7 | 4 | 4 | 5 | Peptidase_S10 |
| pfam00461 | 2 | 0 | 2 | 1 | 0 | 1 | 2 | 1 | 1 | 3 | 10 | 9 | 1 | 3 | 3 | 1 | 3 | 3 | 2 | 4 | 2 | 4 | 4 | 3 | 6 | 5 | Peptidase_S26 |
| pfam00082 | 12 | 0 | 0 | 2 | 0 | 9 | 3 | 4 | 0 | 13 | 81 | 58 | 2 | 5 | 4 | 8 | 4 | 6 | 9 | 9 | 23 | 8 | 9 | 8 | 19 | 13 | Peptidase_S8 |
| pfam00294 | 8 | 0 | 0 | 1 | 0 | 3 | 7 | 7 | 7 | 4 | 19 | 10 | 0 | 5 | 5 | 5 | 3 | 5 | 5 | 5 | 6 | 6 | 20 | 5 | 5 | 6 | PfkB |
| pfam04185 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 5 | 0 | 0 | 5 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Phosphoesterase |
| pfam03126 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 2 | 1 | 1 | 7 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 5 | 1 | 2 | 0 | Plus-3 |
| smart00719 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 4 | 1 | 1 | 7 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 5 | 1 | 2 | 0 | Plus3 |
| pfam00432 | 9 | 0 | 0 | 5 | 5 | 0 | 14 | 7 | 6 | 5 | 39 | 8 | 2 | 10 | 7 | 7 | 8 | 9 | 10 | 8 | 9 | 9 | 9 | 10 | 18 | 18 | Prenyltrans |
| smart00025 | 10 | 0 | 0 | 3 | 0 | 7 | 18 | 17 | 21 | 5 | 61 | 54 | 3 | 20 | 18 | 17 | 15 | 13 | 31 | 16 | 8 | 7 | 8 | 11 | 32 | 16 | Pumilio |
| pfam00719 | 1 | 0 | 0 | 1 | 1 | 1 | 4 | 4 | 2 | 3 | 6 | 10 | 1 | 2 | 2 | 3 | 2 | 2 | 1 | 1 | 1 | 4 | 1 | 1 | 3 | 2 | Pyrophosphatase |
| pfam00077 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 35 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 2 | 1 | 4 | 7 | 1 | 19 | 7 | RVP |
| pfam00078 | 4 | 0 | 0 | 0 | 0 | 0 | 1 | 181 | 0 | 127 | 105 | 1510 | 1 | 5 | 27 | 1 | 2 | 2 | 59 | 12 | 6 | 51 | 32 | 80 | 44 | 11 | RVT |
| pfam04712 | 0 | 0 | 0 | 2 | 0 | 1 | 4 | 4 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 3 | 4 | 8 | Radial_spoke |
| pfam03732 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 92 | 1425 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 1 | 2 | 4 | 0 | 4 | 5 | Retrotrans_gag |
| pfam00075 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 124 | 1 | 3 | 13 | 145 | 0 | 1 | 12 | 1 | 1 | 1 | 5 | 3 | 0 | 5 | 5 | 5 | 17 | 9 | RnaseH |
| pfam02772 | 1 | 0 | 0 | 1 | 1 | 1 | 18 | 2 | 2 | 1 | 4 | 7 | 0 | 1 | 1 | 1 | 2 | 2 | 7 | 6 | 0 | 3 | 1 | 1 | 2 | 4 | S-AdoMet_synt_M |
| smart00717 | 33 | 0 | 3 | 4 | 12 | 9 | 5 | 6 | 3 | 26 | 345 | 217 | 10 | 12 | 21 | 17 | 18 | 16 | 24 | 14 | 23 | 17 | 32 | 21 | 69 | 59 | SANT |
| pfam01758 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 5 | 3 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 8 | 3 | 4 | SBF |
| smart00463 | 4 | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 0 | 1 | 10 | 15 | 0 | 2 | 2 | 2 | 2 | 2 | 6 | 0 | 0 | 1 | 3 | 0 | 1 | 0 | SMR |
| pfam03105 | 5 | 0 | 2 | 2 | 1 | 3 | 1 | 5 | 1 | 4 | 27 | 15 | 2 | 6 | 6 | 7 | 15 | 9 | 1 | 1 | 1 | 4 | 5 | 1 | 3 | 3 | SPX |
| smart00466 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 3 | 17 | 7 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 4 | SRA |
| pfam00319 | 3 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 78 | 37 | 1 | 3 | 1 | 1 | 4 | 5 | 2 | 2 | 3 | 2 | 4 | 2 | 5 | 11 | SRF-TF |
| pfam00448 | 2 | 0 | 0 | 3 | 2 | 2 | 2 | 3 | 2 | 4 | 7 | 3 | 2 | 2 | 3 | 4 | 2 | 2 | 3 | 3 | 14 | 5 | 3 | 2 | 3 | 4 | SRP54 |
| pfam01740 | 2 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 12 | 8 | 0 | 4 | 2 | 2 | 1 | 2 | 7 | 5 | 2 | 3 | 4 | 4 | 20 | 9 | STAS |
| pfam02201 | 1 | 0 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 1 | 21 | 8 | 1 | 2 | 2 | 2 | 2 | 2 | 3 | 3 | 2 | 2 | 3 | 1 | 14 | 11 | SWIB |
| smart00151 | 1 | 0 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 2 | 21 | 8 | 1 | 2 | 2 | 2 | 2 | 2 | 3 | 3 | 2 | 2 | 3 | 1 | 5 | 6 | SWIB |
| pfam00995 | 9 | 0 | 1 | 9 | 6 | 5 | 7 | 46 | 8 | 6 | 7 | 11 | 4 | 4 | 6 | 4 | 5 | 7 | 8 | 9 | 6 | 6 | 6 | 5 | 9 | 11 | Sec1 |
| pfam01641 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 5 | 8 | 4 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 2 | 2 | 4 | 3 | SelR |
| pfam03145 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 18 | 12 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 3 | 5 | 1 | 5 | 3 | Sina |
| pfam00382 | 4 | 3 | 2 | 2 | 2 | 4 | 2 | 2 | 1 | 2 | 14 | 4 | 4 | 3 | 3 | 4 | 4 | 4 | 3 | 1 | 6 | 5 | 6 | 4 | 5 | 4 | TFIIB |
| smart00509 | 2 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 15 | 5 | 0 | 0 | 2 | 1 | 0 | 0 | 2 | 3 | 0 | 2 | 1 | 2 | 9 | 7 | TFS2N |
| smart00205 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 28 | 24 | 0 | 0 | 0 | 2 | 1 | 0 | 7 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | THN |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Hs | Mm | |
| smart00255 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 143 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 3 | 25 | 15 | 17 | 10 | 28 | 27 | TIR |
| pfam01582 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 133 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 3 | 24 | 14 | 14 | 9 | 21 | 21 | TIR |
| pfam02776 | 3 | 0 | 0 | 1 | 1 | 0 | 1 | 2 | 1 | 2 | 6 | 10 | 0 | 6 | 6 | 4 | 7 | 6 | 3 | 2 | 0 | 2 | 1 | 2 | 5 | 2 | TPP_enzyme_N |
| pfam05731 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 2 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 4 | 3 | 5 | TROVE |
| pfam00314 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 26 | 21 | 0 | 0 | 0 | 2 | 0 | 0 | 7 | 9 | 0 | 0 | 0 | 0 | 0 | 0 | Thaumatin |
| pfam06309 | 2 | 0 | 0 | 2 | 0 | 3 | 4 | 6 | 4 | 1 | 5 | 8 | 0 | 1 | 2 | 1 | 1 | 2 | 3 | 2 | 0 | 3 | 1 | 2 | 14 | 8 | Torsin |
| pfam02458 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 66 | 97 | 0 | 0 | 10 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | Transferase |
| pfam01609 | 1 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 5 | 26 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 1 | 1 | 1 | 0 | Transposase_11 |
| pfam02358 | 2 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 3 | 21 | 16 | 1 | 4 | 2 | 2 | 2 | 3 | 0 | 0 | 1 | 2 | 3 | 0 | 0 | 0 | Trehalose_PPase |
| pfam04564 | 5 | 0 | 0 | 1 | 1 | 1 | 3 | 4 | 4 | 17 | 55 | 55 | 1 | 1 | 2 | 1 | 1 | 1 | 4 | 2 | 3 | 5 | 7 | 6 | 9 | 10 | U-box |
| smart00504 | 8 | 0 | 0 | 4 | 2 | 4 | 8 | 10 | 7 | 21 | 66 | 65 | 1 | 4 | 5 | 3 | 2 | 4 | 7 | 5 | 8 | 10 | 17 | 13 | 27 | 30 | Ubox |
| pfam00582 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 24 | 18 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 0 | 0 | Usp |
| pfam02182 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 2 | 17 | 6 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 4 | YDG_SRA |
| pfam04146 | 0 | 0 | 0 | 2 | 0 | 2 | 0 | 0 | 0 | 1 | 13 | 19 | 0 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 3 | 2 | 6 | 2 | 6 | 8 | YTH |
| smart00614 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 19 | 75 | 0 | 0 | 0 | 0 | 1 | 0 | 6 | 3 | 1 | 5 | 11 | 3 | 7 | 7 | ZnF_BED |
| smart00343 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 31 | 409 | 0 | 1 | 3 | 0 | 1 | 0 | 9 | 1 | 3 | 6 | 1 | 6 | 29 | 17 | ZnF_C2HC |
| smart00551 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 15 | 8 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 2 | 3 | 4 | 4 | 2 | 7 | 5 | ZnF_TAZ |
| smart00597 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 7 | 13 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 5 | 5 | 3 | ZnF_TTF |
| pfam00106 | 67 | 0 | 4 | 5 | 5 | 17 | 19 | 24 | 18 | 29 | 93 | 68 | 2 | 19 | 150 | 65 | 18 | 17 | 88 | 61 | 59 | 53 | 69 | 77 | 88 | 72 | adh_short |
| pfam02492 | 3 | 0 | 0 | 1 | 1 | 2 | 1 | 2 | 2 | 17 | 3 | 3 | 0 | 1 | 4 | 2 | 1 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 11 | 2 | cobW |
| pfam05699 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 5 | 37 | 119 | 0 | 0 | 0 | 0 | 0 | 0 | 7 | 1 | 0 | 15 | 1 | 14 | 4 | 4 | hATC |
| pfam02536 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 37 | 20 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 4 | 1 | 3 | 5 | mTERF |
| pfam00067 | 65 | 0 | 0 | 0 | 0 | 1 | 4 | 5 | 4 | 45 | 271 | 277 | 0 | 2 | 125 | 39 | 3 | 4 | 79 | 97 | 125 | 132 | 103 | 95 | 108 | 112 | p450 |
| pfam00141 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 6 | 81 | 130 | 0 | 0 | 3 | 5 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | peroxidase |
| pfam00348 | 5 | 0 | 0 | 2 | 2 | 3 | 3 | 5 | 3 | 4 | 18 | 11 | 1 | 3 | 8 | 3 | 3 | 3 | 2 | 2 | 4 | 5 | 6 | 3 | 7 | 5 | polyprenyl_synt |
| pfam00665 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 27 | 144 | 1767 | 0 | 3 | 21 | 0 | 36 | 1 | 22 | 10 | 3 | 38 | 24 | 65 | 25 | 16 | rve |
| pfam01428 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 7 | 9 | 1 | 0 | 0 | 0 | 1 | 1 | 2 | 2 | 3 | 2 | 1 | 3 | 5 | 2 | zf-AN1 |
| pfam02892 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 17 | 56 | 0 | 0 | 0 | 0 | 1 | 0 | 6 | 4 | 1 | 4 | 7 | 2 | 6 | 6 | zf-BED |