| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Fr | Hs | Mm | Rn | |
| 0003824 (catalytic activity): #55 |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Fr | Hs | Mm | Rn | |
| pfam00408 | 2 | 0 | 0 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 5 | 1 | 0 | 3 | 1 | 1 | 3 | 3 | 2 | 3 | 0 | 2 | 3 | 2 | 1 | 3 | 4 | 4 | PGM_PMM_IV |
| pfam03446 | 1 | 0 | 0 | 1 | 0 | 3 | 3 | 3 | 1 | 1 | 6 | 2 | 1 | 1 | 3 | 2 | 2 | 1 | 1 | 1 | 5 | 1 | 3 | 3 | 3 | 5 | 3 | 3 | NAD_binding_2 |
| pfam03919 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 3 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 3 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | mRNA_cap_C |
| pfam01068 | 3 | 0 | 0 | 1 | 0 | 3 | 6 | 5 | 4 | 2 | 4 | 2 | 1 | 3 | 4 | 4 | 2 | 2 | 2 | 2 | 8 | 2 | 7 | 4 | 3 | 5 | 3 | 3 | DNA_ligase_A_M |
| pfam03332 | 2 | 0 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 6 | 2 | 4 | 5 | PMM |
| pfam02812 | 1 | 0 | 0 | 2 | 0 | 1 | 0 | 2 | 1 | 2 | 4 | 6 | 0 | 1 | 1 | 1 | 3 | 2 | 1 | 1 | 2 | 5 | 3 | 2 | 2 | 2 | 1 | 1 | GLFV_dehydrog_N |
| pfam02666 | 3 | 0 | 0 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 3 | 2 | 0 | 4 | 6 | 4 | 3 | 3 | 2 | 1 | 0 | 2 | 1 | 1 | 3 | 2 | 3 | 1 | PS_Dcarbxylase |
| pfam01507 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 2 | 4 | 1 | 0 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 2 | 2 | 4 | 1 | 1 | 2 | 1 | 1 | PAPS_reduct |
| pfam01193 | 3 | 1 | 0 | 5 | 2 | 3 | 3 | 3 | 2 | 1 | 5 | 6 | 2 | 4 | 4 | 3 | 4 | 3 | 2 | 2 | 3 | 3 | 4 | 3 | 5 | 5 | 4 | 3 | RNA_pol_L |
| pfam03568 | 1 | 0 | 0 | 1 | 1 | 0 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 4 | 2 | 0 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | Peptidase_C50 |
| pfam00639 | 2 | 0 | 1 | 0 | 0 | 1 | 6 | 6 | 2 | 0 | 2 | 2 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 2 | 0 | 3 | 3 | 1 | 2 | 2 | 2 | 2 | Rotamase |
| pfam00549 | 4 | 0 | 0 | 2 | 0 | 3 | 3 | 3 | 3 | 2 | 5 | 3 | 0 | 3 | 5 | 5 | 2 | 2 | 6 | 6 | 4 | 5 | 6 | 4 | 7 | 7 | 5 | 5 | Ligase_CoA |
| pfam00464 | 2 | 0 | 0 | 2 | 2 | 1 | 0 | 2 | 2 | 3 | 6 | 5 | 1 | 2 | 2 | 2 | 2 | 2 | 1 | 0 | 4 | 4 | 1 | 3 | 6 | 4 | 3 | 2 | SHMT |
| pfam05185 | 2 | 0 | 0 | 2 | 1 | 3 | 1 | 1 | 2 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 3 | 4 | 3 | 3 | 1 | 2 | Skb1 |
| pfam01255 | 1 | 0 | 0 | 2 | 0 | 1 | 2 | 1 | 1 | 2 | 8 | 2 | 1 | 2 | 3 | 3 | 3 | 2 | 1 | 1 | 1 | 3 | 1 | 1 | 3 | 2 | 1 | 1 | UPP_synthetase |
| pfam03876 | 2 | 1 | 0 | 1 | 0 | 2 | 1 | 2 | 0 | 2 | 4 | 3 | 1 | 2 | 2 | 1 | 2 | 2 | 2 | 2 | 1 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | RNA_pol_Rpb7_N |
| pfam04573 | 1 | 0 | 0 | 0 | 1 | 1 | 2 | 2 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 3 | SPC22 |
| pfam03871 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 6 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | RNA_pol_Rpb5_N |
| pfam02781 | 1 | 0 | 0 | 2 | 0 | 2 | 1 | 4 | 1 | 1 | 6 | 3 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 3 | 1 | 5 | 3 | 3 | 2 | G6PD_C |
| pfam00867 | 3 | 0 | 0 | 4 | 3 | 5 | 5 | 5 | 3 | 2 | 7 | 4 | 3 | 4 | 4 | 5 | 5 | 4 | 4 | 3 | 5 | 5 | 6 | 4 | 4 | 5 | 6 | 3 | XPG_I |
| pfam01564 | 1 | 0 | 0 | 1 | 1 | 0 | 3 | 4 | 1 | 2 | 5 | 4 | 0 | 1 | 2 | 1 | 2 | 2 | 3 | 4 | 5 | 4 | 6 | 2 | 4 | 6 | 4 | 5 | Spermine_synth |
| smart00485 | 4 | 0 | 0 | 3 | 3 | 4 | 5 | 7 | 3 | 4 | 8 | 3 | 3 | 5 | 5 | 5 | 6 | 5 | 4 | 3 | 2 | 5 | 6 | 6 | 4 | 7 | 9 | 5 | XPGN |
| pfam01896 | 1 | 0 | 0 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 6 | 1 | 1 | 0 | DNA_primase_S |
| pfam03099 | 4 | 0 | 0 | 2 | 1 | 3 | 4 | 5 | 3 | 4 | 7 | 2 | 0 | 3 | 2 | 3 | 3 | 3 | 6 | 1 | 6 | 3 | 3 | 4 | 2 | 3 | 3 | 2 | BPL_LipA_LipB |
| pfam00186 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 3 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 3 | 5 | 1 | 1 | DiHfolate_red |
| pfam00479 | 1 | 0 | 0 | 2 | 0 | 1 | 1 | 3 | 1 | 1 | 6 | 3 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 3 | 1 | 5 | 3 | 3 | 2 | G6PD_N |
| pfam00268 | 2 | 0 | 0 | 2 | 3 | 1 | 0 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 1 | 1 | 2 | 3 | 2 | 3 | Ribonuc_red_sm |
| pfam04152 | 1 | 0 | 1 | 1 | 2 | 2 | 2 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | Mre11_DNA_bind |
| pfam00551 | 2 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 4 | 3 | 4 | 0 | 2 | 3 | 2 | 3 | 2 | 2 | 3 | 4 | 4 | 4 | 3 | 7 | 7 | 4 | 4 | Formyl_trans_N |
| smart00662 | 2 | 3 | 0 | 4 | 2 | 3 | 3 | 3 | 2 | 2 | 4 | 5 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | 3 | 3 | 3 | 4 | 5 | 2 | 4 | 2 | RPOLD |
| pfam00834 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 4 | 2 | 3 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | Ribul_P_3_epim |
| pfam00303 | 0 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 3 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | Thymidylat_synt |
| pfam02729 | 1 | 0 | 0 | 1 | 0 | 1 | 2 | 4 | 1 | 2 | 2 | 1 | 0 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 4 | 1 | 1 | 1 | 7 | 2 | 2 | 2 | OTCace_N |
| pfam01725 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | Ham1p_like |
| pfam01509 | 1 | 0 | 0 | 2 | 1 | 2 | 1 | 2 | 1 | 3 | 2 | 4 | 1 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 3 | 6 | 1 | TruB_N |
| pfam05195 | 2 | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 0 | 2 | 1 | 0 | 1 | 3 | 3 | 2 | 3 | 1 | 2 | 1 | 1 | 4 | 3 | 5 | 4 | 2 | 6 | AMP_N |
| pfam02910 | 1 | 0 | 0 | 1 | 0 | 1 | 2 | 1 | 1 | 2 | 3 | 2 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 7 | 1 | 2 | 2 | 3 | 2 | 1 | 1 | Succ_DH_flav_C |
| pfam03874 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 0 | 0 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | RNA_pol_Rpb4 |
| pfam01238 | 1 | 0 | 0 | 2 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 0 | 1 | 2 | 2 | 1 | 1 | 2 | 3 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 5 | PMI_typeI |
| pfam02580 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 2 | 4 | 3 | Tyr_Deacylase |
| pfam00121 | 1 | 0 | 0 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 6 | 1 | 1 | 2 | 2 | 1 | 1 | 4 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 2 | 4 | TIM |
| pfam01148 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 4 | 1 | 2 | 6 | 3 | 1 | 3 | 1 | 2 | 3 | 2 | 2 | 2 | 0 | 2 | 1 | 1 | 2 | 2 | 3 | 2 | CTP_transf_1 |
| pfam03104 | 4 | 0 | 0 | 2 | 0 | 2 | 5 | 4 | 3 | 4 | 6 | 2 | 2 | 4 | 4 | 5 | 4 | 4 | 4 | 3 | 2 | 6 | 6 | 4 | 10 | 5 | 7 | 4 | DNA_pol_B_exo |
| pfam00752 | 3 | 0 | 0 | 3 | 3 | 4 | 5 | 5 | 3 | 4 | 8 | 3 | 3 | 5 | 4 | 4 | 5 | 5 | 4 | 3 | 2 | 5 | 6 | 6 | 4 | 6 | 8 | 4 | XPG_N |
| pfam00342 | 1 | 0 | 0 | 2 | 1 | 2 | 1 | 0 | 1 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 2 | 1 | 3 | 6 | 1 | 2 | 1 | PGI |
| pfam00590 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 4 | 2 | 1 | 3 | 3 | 1 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 4 | 2 | 1 | 1 | 4 | 1 | 3 | 1 | TP_methylase |
| pfam01704 | 3 | 0 | 0 | 0 | 2 | 2 | 2 | 5 | 3 | 2 | 4 | 4 | 3 | 3 | 2 | 2 | 3 | 2 | 9 | 6 | 3 | 2 | 5 | 3 | 5 | 8 | 6 | 3 | UDPGP |
| pfam01331 | 1 | 2 | 1 | 1 | 1 | 1 | 3 | 3 | 1 | 0 | 3 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 3 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | mRNA_cap_enzyme |
| pfam01207 | 5 | 0 | 0 | 2 | 3 | 4 | 7 | 8 | 5 | 8 | 5 | 7 | 2 | 4 | 3 | 4 | 4 | 4 | 4 | 4 | 7 | 7 | 5 | 5 | 6 | 7 | 5 | 3 | Dus |
| pfam02867 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 5 | 1 | 1 | 2 | 1 | 3 | 0 | Ribonuc_red_lgC |
| pfam00285 | 5 | 0 | 1 | 1 | 0 | 5 | 1 | 4 | 2 | 3 | 7 | 3 | 0 | 2 | 5 | 3 | 3 | 3 | 3 | 3 | 6 | 3 | 4 | 2 | 4 | 5 | 3 | 3 | Citrate_synt |
| smart00484 | 2 | 0 | 0 | 3 | 3 | 5 | 5 | 4 | 3 | 2 | 6 | 4 | 4 | 5 | 5 | 5 | 6 | 5 | 4 | 3 | 5 | 5 | 6 | 4 | 4 | 5 | 6 | 3 | XPGI |
| pfam04675 | 3 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 3 | 1 | 1 | 3 | 2 | 3 | 1 | 1 | 3 | 1 | 6 | 1 | 3 | 4 | 3 | 4 | 3 | 3 | DNA_ligase_A_N |
| pfam04104 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 3 | 1 | 1 | DNA_primase_lrg |
| pfam01168 | 1 | 0 | 0 | 0 | 1 | 1 | 2 | 4 | 1 | 1 | 2 | 2 | 0 | 4 | 2 | 2 | 1 | 2 | 1 | 1 | 0 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | Ala_racemase_N |
| 0003676 (nucleic acid binding): #51 |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Fr | Hs | Mm | Rn | |
| smart00434 | 3 | 1 | 1 | 2 | 2 | 3 | 2 | 4 | 2 | 2 | 3 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 4 | 4 | 2 | 2 | 1 | 1 | 6 | 2 | 4 | 1 | TOP4c |
| pfam00416 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 3 | 3 | 4 | 0 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 7 | Ribosomal_S13 |
| pfam05158 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | RNA_pol_Rpc34 |
| pfam00580 | 0 | 0 | 0 | 2 | 3 | 2 | 1 | 5 | 1 | 6 | 2 | 5 | 2 | 2 | 3 | 2 | 3 | 3 | 3 | 0 | 1 | 3 | 6 | 3 | 1 | 4 | 3 | 4 | UvrD-helicase |
| pfam00705 | 1 | 1 | 0 | 2 | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 2 | 1 | 2 | 1 | PCNA_N |
| smart00661 | 1 | 0 | 0 | 0 | 2 | 1 | 2 | 2 | 0 | 2 | 2 | 1 | 2 | 3 | 1 | 3 | 3 | 3 | 2 | 2 | 3 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | RPOL9 |
| smart00341 | 2 | 0 | 0 | 0 | 1 | 0 | 2 | 1 | 1 | 1 | 3 | 1 | 0 | 2 | 1 | 1 | 2 | 2 | 3 | 3 | 1 | 1 | 3 | 4 | 1 | 3 | 4 | 4 | HRDC |
| pfam04566 | 2 | 2 | 0 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 3 | 4 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 3 | RNA_pol_Rpb2_4 |
| pfam01269 | 1 | 1 | 0 | 1 | 1 | 1 | 3 | 4 | 2 | 1 | 3 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 2 | 1 | 1 | 1 | 4 | 7 | Fibrillarin |
| pfam05645 | 2 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 3 | 1 | 1 | 1 | 1 | RNA_pol_Rpc82 |
| pfam01479 | 2 | 1 | 0 | 1 | 2 | 2 | 3 | 5 | 2 | 3 | 7 | 3 | 1 | 4 | 3 | 3 | 4 | 4 | 3 | 2 | 1 | 2 | 2 | 2 | 2 | 3 | 1 | 3 | S4 |
| pfam01192 | 2 | 1 | 0 | 1 | 1 | 1 | 4 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | RNA_pol_Rpb6 |
| pfam02005 | 1 | 0 | 0 | 2 | 2 | 3 | 2 | 4 | 3 | 3 | 3 | 2 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 4 | 7 | 7 | 4 | 4 | TRM |
| smart00440 | 3 | 0 | 0 | 3 | 2 | 4 | 3 | 8 | 4 | 2 | 5 | 5 | 3 | 4 | 1 | 3 | 4 | 4 | 4 | 4 | 5 | 5 | 6 | 4 | 8 | 6 | 7 | 10 | ZnF_C2C2 |
| pfam00773 | 7 | 1 | 2 | 5 | 3 | 4 | 3 | 4 | 2 | 4 | 4 | 3 | 1 | 5 | 3 | 4 | 3 | 3 | 2 | 2 | 4 | 2 | 3 | 5 | 8 | 12 | 8 | 5 | RNB |
| pfam02840 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 2 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | Prp18 |
| smart00493 | 2 | 0 | 0 | 0 | 1 | 4 | 2 | 5 | 2 | 3 | 5 | 7 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 5 | 3 | 2 | 1 | 4 | 2 | 2 | 2 | TOPRIM |
| pfam00562 | 4 | 5 | 0 | 6 | 2 | 4 | 4 | 4 | 3 | 6 | 7 | 7 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 7 | 3 | 5 | 4 | 6 | 5 | 4 | 6 | RNA_pol_Rpb2_6 |
| pfam03531 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 5 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | SSrecog |
| pfam01336 | 5 | 0 | 0 | 4 | 1 | 3 | 8 | 6 | 5 | 4 | 9 | 2 | 2 | 7 | 4 | 6 | 5 | 6 | 6 | 6 | 3 | 6 | 10 | 5 | 7 | 7 | 7 | 5 | tRNA_anti |
| pfam04567 | 2 | 1 | 0 | 1 | 1 | 1 | 3 | 2 | 2 | 1 | 1 | 2 | 2 | 3 | 3 | 3 | 1 | 2 | 3 | 3 | 6 | 2 | 5 | 2 | 2 | 4 | 2 | 5 | RNA_pol_Rpb2_5 |
| pfam04560 | 3 | 3 | 0 | 3 | 1 | 3 | 3 | 3 | 3 | 3 | 7 | 6 | 3 | 3 | 3 | 2 | 3 | 3 | 2 | 3 | 5 | 3 | 5 | 3 | 6 | 5 | 4 | 4 | RNA_pol_Rpb2_7 |
| pfam00488 | 6 | 0 | 0 | 2 | 2 | 3 | 6 | 9 | 7 | 5 | 8 | 6 | 2 | 4 | 4 | 5 | 6 | 6 | 5 | 4 | 9 | 5 | 2 | 4 | 8 | 11 | 6 | 5 | MutS_V |
| pfam04565 | 3 | 3 | 0 | 3 | 2 | 3 | 4 | 4 | 3 | 2 | 7 | 7 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 5 | 3 | 6 | 4 | 3 | 3 | RNA_pol_Rpb2_3 |
| pfam01191 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 4 | 2 | 1 | 4 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | RNA_pol_Rpb5_C |
| pfam04042 | 1 | 0 | 0 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 1 | 2 | 2 | 3 | 1 | DNA_pol_E_B |
| smart00437 | 1 | 0 | 0 | 1 | 3 | 4 | 3 | 7 | 2 | 4 | 3 | 6 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 3 | 4 | 5 | 2 | 3 | 8 | 4 | 3 | 5 | TOP1Ac |
| pfam02747 | 1 | 1 | 0 | 2 | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 2 | 1 | 2 | 2 | PCNA_C |
| pfam02978 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 4 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 5 | 2 | 2 | 1 | 3 | 1 | 3 | 3 | SRP_SPB |
| pfam04563 | 4 | 3 | 0 | 3 | 2 | 3 | 4 | 5 | 3 | 4 | 7 | 7 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 5 | 3 | 5 | 4 | 6 | 4 | 3 | 3 | RNA_pol_Rpb2_1 |
| pfam00521 | 2 | 1 | 1 | 2 | 1 | 3 | 2 | 4 | 2 | 3 | 3 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 5 | 4 | 2 | 2 | 1 | 1 | 5 | 2 | 3 | 1 | DNA_topoisoIV |
| smart00359 | 4 | 0 | 0 | 3 | 4 | 4 | 5 | 5 | 3 | 3 | 4 | 1 | 3 | 4 | 4 | 3 | 5 | 5 | 3 | 4 | 4 | 3 | 7 | 5 | 4 | 4 | 6 | 3 | PUA |
| pfam00588 | 5 | 0 | 0 | 3 | 2 | 2 | 6 | 3 | 3 | 8 | 5 | 4 | 0 | 1 | 1 | 1 | 3 | 2 | 2 | 2 | 0 | 2 | 3 | 2 | 5 | 4 | 3 | 2 | SpoU_methylase |
| pfam02732 | 4 | 0 | 0 | 2 | 2 | 2 | 4 | 2 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 0 | 3 | 3 | 2 | 5 | 4 | 2 | 5 | ERCC4 |
| pfam00204 | 2 | 1 | 1 | 2 | 0 | 2 | 2 | 4 | 2 | 2 | 4 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 4 | 0 | 2 | 1 | 1 | 5 | 2 | 3 | 0 | DNA_gyraseB |
| pfam01922 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | 1 | SRP19 |
| pfam01351 | 1 | 0 | 0 | 1 | 2 | 1 | 3 | 6 | 4 | 2 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | RNase_HII |
| smart00559 | 2 | 0 | 0 | 0 | 1 | 1 | 4 | 1 | 2 | 1 | 3 | 4 | 0 | 2 | 2 | 2 | 2 | 1 | 2 | 2 | 0 | 2 | 3 | 3 | 2 | 3 | 2 | 2 | Ku78 |
| smart00436 | 1 | 0 | 0 | 1 | 1 | 3 | 3 | 5 | 2 | 2 | 3 | 6 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 2 | 5 | 4 | 2 | 2 | 5 | 2 | 2 | 2 | TOP1Bc |
| smart00520 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 2 | 1 | 1 | 0 | 0 | 1 | 1 | 3 | 2 | 2 | 1 | 2 | 2 | 3 | 4 | 3 | 2 | BASIC |
| pfam01588 | 4 | 0 | 0 | 1 | 1 | 1 | 4 | 4 | 2 | 4 | 3 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 3 | 2 | 3 | 4 | tRNA_bind |
| pfam01743 | 2 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 5 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | PolyA_pol |
| pfam01472 | 3 | 0 | 0 | 3 | 3 | 3 | 2 | 3 | 2 | 2 | 2 | 1 | 2 | 2 | 3 | 2 | 4 | 3 | 2 | 3 | 5 | 2 | 4 | 4 | 2 | 2 | 3 | 1 | PUA |
| pfam01624 | 3 | 0 | 0 | 2 | 1 | 2 | 2 | 2 | 2 | 0 | 5 | 4 | 1 | 4 | 4 | 4 | 4 | 4 | 2 | 2 | 4 | 3 | 2 | 2 | 6 | 4 | 6 | 4 | MutS_I |
| smart00475 | 1 | 0 | 0 | 3 | 2 | 3 | 3 | 3 | 2 | 2 | 5 | 4 | 1 | 2 | 3 | 2 | 3 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 2 | 3 | 3 | 1 | 53EXOc |
| pfam03178 | 3 | 0 | 0 | 2 | 3 | 3 | 5 | 7 | 3 | 3 | 6 | 7 | 2 | 5 | 3 | 3 | 2 | 2 | 3 | 3 | 5 | 4 | 4 | 4 | 10 | 5 | 5 | 2 | CPSF_A |
| pfam04410 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | Gar1 |
| pfam00154 | 2 | 0 | 0 | 1 | 1 | 1 | 3 | 2 | 2 | 2 | 5 | 4 | 1 | 4 | 1 | 1 | 2 | 2 | 2 | 1 | 0 | 0 | 0 | 3 | 2 | 3 | 2 | 3 | RecA |
| pfam00940 | 1 | 0 | 0 | 2 | 0 | 1 | 1 | 2 | 1 | 1 | 3 | 1 | 0 | 1 | 1 | 2 | 2 | 1 | 1 | 3 | 0 | 1 | 2 | 1 | 4 | 1 | 1 | 3 | RNA_pol |
| smart00534 | 6 | 0 | 0 | 3 | 2 | 3 | 6 | 9 | 6 | 6 | 9 | 6 | 2 | 4 | 4 | 5 | 6 | 6 | 6 | 4 | 9 | 5 | 2 | 4 | 8 | 11 | 6 | 5 | MUTSac |
| pfam01096 | 1 | 0 | 0 | 2 | 1 | 2 | 2 | 6 | 3 | 2 | 5 | 4 | 2 | 3 | 0 | 2 | 3 | 3 | 4 | 4 | 5 | 5 | 5 | 3 | 7 | 5 | 5 | 8 | TFIIS |
| 0003735 (structural constituent of ribosome): #36 |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Fr | Hs | Mm | Rn | |
| pfam00312 | 1 | 2 | 0 | 3 | 1 | 1 | 3 | 4 | 2 | 1 | 3 | 1 | 0 | 2 | 1 | 1 | 2 | 2 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | Ribosomal_S15 |
| pfam00177 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 4 | 2 | 2 | 4 | 1 | 1 | 3 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 3 | 3 | 2 | 2 | 2 | 2 | 2 | Ribosomal_S7 |
| pfam01020 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 5 | 2 | 1 | 1 | 2 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | Ribosomal_L40e |
| pfam01159 | 1 | 0 | 0 | 0 | 1 | 1 | 2 | 4 | 2 | 1 | 4 | 3 | 0 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 2 | 4 | Ribosomal_L6e |
| pfam03947 | 1 | 1 | 0 | 2 | 1 | 2 | 5 | 3 | 4 | 2 | 6 | 0 | 1 | 2 | 2 | 2 | 2 | 2 | 4 | 2 | 3 | 2 | 3 | 3 | 3 | 4 | 3 | 8 | Ribosomal_L2_C |
| pfam00900 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 3 | 3 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 4 | 3 | 4 | Ribosomal_S4e |
| pfam00572 | 2 | 1 | 0 | 2 | 1 | 2 | 6 | 6 | 3 | 3 | 6 | 5 | 1 | 4 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 6 | Ribosomal_L13 |
| pfam00826 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 4 | 2 | 1 | 3 | 4 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 5 | 2 | 4 | Ribosomal_L10e |
| pfam01246 | 2 | 1 | 0 | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 3 | 4 | 1 | 3 | 2 | 2 | 3 | 2 | 1 | 2 | 2 | 1 | 2 | 2 | 2 | 1 | 2 | 2 | Ribosomal_L24e |
| pfam00163 | 1 | 1 | 0 | 1 | 0 | 1 | 3 | 3 | 2 | 1 | 3 | 1 | 0 | 2 | 1 | 1 | 3 | 3 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 3 | Ribosomal_S4 |
| pfam01780 | 1 | 0 | 0 | 1 | 0 | 1 | 2 | 0 | 2 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 7 | Ribosomal_L37ae |
| pfam01092 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 2 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 4 | 1 | 1 | 2 | 1 | 3 | Ribosomal_S6e |
| pfam00861 | 1 | 0 | 0 | 2 | 1 | 2 | 2 | 3 | 3 | 2 | 4 | 8 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 2 | 1 | 3 | 3 | 2 | 3 | Ribosomal_L18p |
| pfam00833 | 2 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 4 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 7 | Ribosomal_S17e |
| pfam01667 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 4 | 3 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 3 | 2 | 5 | Ribosomal_S27e |
| pfam00573 | 2 | 1 | 0 | 2 | 1 | 3 | 2 | 2 | 2 | 3 | 5 | 3 | 1 | 3 | 3 | 3 | 5 | 3 | 2 | 2 | 1 | 2 | 1 | 3 | 3 | 4 | 2 | 2 | Ribosomal_L4 |
| pfam00828 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 3 | 2 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | Ribosomal_L18e |
| pfam00673 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 3 | 5 | 1 | 2 | 2 | 2 | 2 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 4 | Ribosomal_L5_C |
| pfam00466 | 0 | 0 | 0 | 1 | 2 | 1 | 2 | 2 | 2 | 2 | 6 | 1 | 1 | 2 | 1 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 2 | 1 | Ribosomal_L10 |
| pfam01015 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 0 | 3 | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 3 | 2 | 6 | Ribosomal_S3Ae |
| pfam00181 | 1 | 1 | 0 | 2 | 1 | 2 | 3 | 2 | 3 | 1 | 5 | 0 | 0 | 2 | 1 | 1 | 2 | 2 | 2 | 2 | 0 | 2 | 3 | 2 | 2 | 3 | 2 | 3 | Ribosomal_L2 |
| pfam00164 | 1 | 1 | 0 | 2 | 0 | 2 | 2 | 3 | 2 | 2 | 4 | 3 | 1 | 2 | 2 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 2 | 3 | 5 | Ribosomal_S12 |
| pfam00411 | 1 | 1 | 0 | 2 | 1 | 1 | 2 | 3 | 2 | 3 | 5 | 5 | 1 | 2 | 2 | 2 | 2 | 3 | 1 | 1 | 1 | 3 | 2 | 2 | 3 | 3 | 3 | 8 | Ribosomal_S11 |
| pfam00189 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 5 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 4 | Ribosomal_S3_C |
| pfam00297 | 3 | 2 | 0 | 3 | 1 | 2 | 6 | 3 | 6 | 4 | 4 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 4 | 2 | 0 | 2 | 4 | 2 | 3 | 4 | 5 | 7 | Ribosomal_L3 |
| pfam00298 | 1 | 1 | 0 | 2 | 1 | 2 | 3 | 2 | 2 | 3 | 6 | 3 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 2 | 2 | 2 | 2 | 5 | 2 | 8 | Ribosomal_L11 |
| pfam01599 | 1 | 1 | 0 | 1 | 1 | 1 | 3 | 3 | 2 | 1 | 3 | 2 | 0 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 2 | 1 | 5 | Ribosomal_S27 |
| pfam00366 | 2 | 1 | 0 | 2 | 0 | 2 | 3 | 5 | 3 | 2 | 6 | 4 | 1 | 2 | 1 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 4 | 4 | 2 | Ribosomal_S17 |
| pfam00827 | 1 | 2 | 0 | 1 | 1 | 1 | 3 | 6 | 2 | 1 | 2 | 3 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 2 | 2 | 1 | 1 | 4 | 2 | 6 | Ribosomal_L15e |
| pfam01199 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 4 | 2 | 1 | 3 | 0 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 3 | Ribosomal_L34e |
| pfam01249 | 1 | 1 | 0 | 1 | 0 | 1 | 2 | 4 | 2 | 0 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 5 | 2 | 3 | Ribosomal_S21e |
| pfam00238 | 1 | 1 | 0 | 2 | 1 | 2 | 4 | 2 | 2 | 1 | 5 | 3 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 4 | Ribosomal_L14 |
| pfam01201 | 2 | 1 | 0 | 1 | 1 | 2 | 4 | 3 | 2 | 2 | 2 | 3 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 9 | Ribosomal_S8e |
| pfam00281 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 4 | 5 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | Ribosomal_L5 |
| pfam00203 | 1 | 1 | 0 | 1 | 1 | 1 | 4 | 2 | 2 | 2 | 8 | 2 | 1 | 3 | 2 | 2 | 2 | 2 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 2 | 1 | 3 | Ribosomal_S19 |
| pfam01775 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 2 | 2 | 1 | 3 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 3 | Ribosomal_L18ae |
| 0005215 (transporter activity): #13 |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Fr | Hs | Mm | Rn | |
| pfam00037 | 2 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 4 | 3 | 0 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 3 | 2 | 2 | 1 | 2 | 1 | Fer4 |
| pfam01012 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 2 | 1 | ETF_beta |
| pfam01992 | 1 | 0 | 0 | 1 | 1 | 2 | 4 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 3 | 1 | 1 | 2 | 2 | 2 | vATP-synt_AC39 |
| pfam02823 | 1 | 0 | 0 | 1 | 0 | 1 | 2 | 1 | 1 | 2 | 2 | 4 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | ATP-synt_DE_N |
| pfam00034 | 1 | 0 | 0 | 1 | 0 | 3 | 2 | 1 | 2 | 1 | 3 | 3 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 2 | 1 | 2 | 2 | 3 | 2 | 3 | 6 | Cytochrom_C |
| pfam02167 | 1 | 0 | 0 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 2 | 2 | 1 | 1 | 1 | 2 | 1 | Cytochrom_C1 |
| pfam00231 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 4 | 3 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | ATP-synt |
| pfam02874 | 3 | 0 | 0 | 3 | 3 | 4 | 3 | 5 | 2 | 4 | 10 | 8 | 2 | 4 | 3 | 4 | 4 | 4 | 5 | 4 | 8 | 5 | 7 | 3 | 6 | 9 | 8 | 6 | ATP-synt_ab_N |
| pfam01990 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | ATP-synt_F |
| pfam01991 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 2 | 4 | 3 | vATP-synt_E |
| pfam00306 | 3 | 0 | 0 | 4 | 3 | 4 | 5 | 6 | 4 | 4 | 9 | 9 | 1 | 4 | 4 | 4 | 4 | 4 | 7 | 5 | 6 | 6 | 8 | 4 | 8 | 9 | 8 | 5 | ATP-synt_ab_C |
| pfam01813 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 1 | 2 | 1 | 1 | ATP-synt_D |
| pfam04053 | 2 | 0 | 0 | 4 | 2 | 3 | 4 | 5 | 3 | 2 | 6 | 6 | 2 | 2 | 2 | 2 | 2 | 2 | 4 | 2 | 8 | 2 | 3 | 3 | 4 | 3 | 2 | 4 | Coatomer_WDAD |
| 0000166 (nucleotide binding): #12 |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Fr | Hs | Mm | Rn | |
| pfam02374 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 2 | 3 | 8 | 4 | 0 | 1 | 1 | 2 | 1 | 1 | 4 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 2 | 2 | ArsA_ATPase |
| pfam00136 | 6 | 0 | 0 | 7 | 4 | 5 | 7 | 6 | 4 | 4 | 7 | 3 | 3 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 5 | 5 | 6 | 5 | 11 | 7 | 8 | 5 | DNA_pol_B |
| pfam03224 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 0 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | V-ATPase_H |
| pfam01121 | 1 | 0 | 0 | 1 | 1 | 0 | 2 | 3 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 0 | 2 | 3 | 1 | 3 | 3 | 3 | 2 | CoaE |
| pfam01018 | 6 | 0 | 0 | 3 | 3 | 5 | 3 | 4 | 3 | 4 | 7 | 3 | 3 | 4 | 5 | 4 | 5 | 6 | 4 | 2 | 6 | 5 | 8 | 4 | 8 | 7 | 6 | 6 | GTP1_OBG |
| pfam01025 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 4 | 4 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 3 | 2 | 2 | GrpE |
| pfam02359 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 0 | 1 | 2 | 0 | 1 | 3 | 3 | 4 | 4 | 2 | 4 | 1 | 5 | 3 | 3 | 4 | CDC48_N |
| pfam03223 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 3 | 5 | 2 | 1 | 3 | 2 | 6 | 3 | V-ATPase_C |
| pfam06421 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 2 | 2 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 2 | 1 | 2 | 1 | 2 | 1 | LepA_C |
| pfam06858 | 1 | 0 | 0 | 2 | 0 | 2 | 1 | 1 | 1 | 0 | 3 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 5 | 2 | 1 | 4 | NOG1 |
| pfam03029 | 4 | 3 | 0 | 3 | 3 | 3 | 5 | 6 | 3 | 4 | 3 | 6 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 1 | 3 | 3 | 3 | 4 | 5 | 3 | 3 | ATP_bind_1 |
| pfam06068 | 2 | 0 | 0 | 3 | 2 | 3 | 4 | 2 | 2 | 2 | 3 | 3 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 4 | 2 | 3 | 2 | 3 | 3 | 2 | 3 | TIP49 |
| 0005554 (molecular_function unknown): #10 |
| pfam03660 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | PHF5 |
| pfam03650 | 2 | 0 | 1 | 2 | 0 | 2 | 3 | 1 | 2 | 1 | 3 | 0 | 0 | 2 | 2 | 3 | 3 | 3 | 2 | 2 | 5 | 2 | 4 | 3 | 2 | 2 | 3 | 4 | UPF0041 |
| pfam00838 | 2 | 0 | 0 | 1 | 1 | 1 | 4 | 2 | 2 | 0 | 2 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 6 | 1 | 5 | TCTP |
| pfam01125 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 6 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | G10 |
| pfam01521 | 2 | 0 | 0 | 2 | 0 | 2 | 4 | 3 | 2 | 3 | 5 | 2 | 0 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 2 | 2 | 2 | 1 | 2 | 3 | 2 | 3 | HesB |
| pfam01256 | 1 | 0 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 2 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 3 | 1 | 2 | Carb_kinase |
| pfam01172 | 1 | 0 | 0 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 0 | 1 | 1 | 2 | UPF0023 |
| pfam03381 | 1 | 0 | 0 | 1 | 2 | 3 | 3 | 3 | 3 | 1 | 5 | 5 | 1 | 1 | 1 | 1 | 3 | 3 | 4 | 3 | 1 | 2 | 2 | 2 | 8 | 2 | 4 | 4 | CDC50 |
| pfam01163 | 2 | 0 | 0 | 2 | 1 | 3 | 4 | 3 | 2 | 1 | 3 | 3 | 3 | 2 | 2 | 2 | 2 | 2 | 5 | 4 | 1 | 3 | 3 | 3 | 4 | 4 | 5 | 4 | RIO1 |
| pfam03715 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 0 | 1 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 3 | 1 | 3 | 1 | 1 | UPF0120 |
| 0004812 (tRNA ligase activity): #8 |
| pfam01411 | 4 | 0 | 0 | 3 | 1 | 1 | 3 | 4 | 3 | 5 | 3 | 5 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 8 | 5 | 5 | 3 | 8 | 4 | 5 | 7 | tRNA-synt_2c |
| pfam00152 | 7 | 0 | 0 | 10 | 4 | 5 | 10 | 9 | 6 | 8 | 16 | 9 | 3 | 7 | 8 | 8 | 7 | 7 | 7 | 10 | 6 | 6 | 7 | 6 | 11 | 10 | 8 | 6 | tRNA-synt_2 |
| pfam01409 | 2 | 0 | 0 | 4 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 0 | 1 | 2 | 2 | 3 | 3 | 3 | 3 | 3 | 4 | 2 | 2 | 2 | 1 | 2 | 5 | 3 | tRNA-synt_2d |
| pfam00750 | 2 | 0 | 0 | 3 | 1 | 4 | 2 | 2 | 2 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 2 | 2 | 3 | 2 | 1 | 4 | 2 | 2 | 3 | 4 | 2 | 2 | tRNA-synt_1d |
| pfam01406 | 2 | 0 | 0 | 1 | 2 | 1 | 4 | 4 | 2 | 4 | 3 | 4 | 1 | 2 | 2 | 2 | 2 | 2 | 5 | 2 | 4 | 2 | 3 | 4 | 7 | 5 | 7 | 4 | tRNA-synt_1e |
| pfam03950 | 2 | 0 | 0 | 2 | 2 | 2 | 3 | 3 | 2 | 1 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 3 | 2 | 2 | 2 | 4 | 2 | 3 | tRNA-synt_1c_C |
| pfam05746 | 2 | 0 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 4 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 1 | 4 | 4 | 3 | 4 | 5 | 4 | 3 | tRNA-synt_1d_C |
| pfam00749 | 3 | 0 | 0 | 3 | 2 | 4 | 3 | 3 | 2 | 3 | 3 | 4 | 2 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 1 | 3 | 4 | 3 | 4 | 7 | 4 | 6 | tRNA-synt_1c |
| 0008135 (translation factor activity, nucleic acid binding): #8 |
| pfam01008 | 4 | 0 | 0 | 3 | 2 | 2 | 6 | 7 | 4 | 4 | 8 | 1 | 0 | 4 | 6 | 4 | 5 | 5 | 3 | 4 | 5 | 6 | 6 | 5 | 6 | 6 | 5 | 4 | IF-2B |
| pfam01176 | 1 | 1 | 0 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 4 | 7 | 3 | eIF-1a |
| pfam05091 | 2 | 0 | 0 | 1 | 1 | 2 | 2 | 2 | 1 | 2 | 4 | 1 | 0 | 2 | 2 | 1 | 0 | 0 | 1 | 1 | 2 | 1 | 4 | 2 | 5 | 2 | 4 | 5 | eIF-3_zeta |
| smart00652 | 2 | 1 | 0 | 2 | 1 | 1 | 3 | 2 | 1 | 3 | 3 | 3 | 0 | 2 | 2 | 1 | 1 | 1 | 2 | 3 | 2 | 2 | 3 | 2 | 2 | 4 | 7 | 3 | eIF1a |
| pfam00736 | 3 | 0 | 0 | 1 | 0 | 2 | 5 | 1 | 3 | 0 | 3 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 2 | 1 | 5 | 4 | 5 | 2 | EF1_GNE |
| pfam01912 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | eIF-6 |
| pfam01253 | 2 | 1 | 0 | 3 | 2 | 4 | 4 | 4 | 3 | 2 | 5 | 5 | 0 | 1 | 2 | 2 | 3 | 3 | 3 | 3 | 4 | 2 | 4 | 3 | 3 | 7 | 5 | 11 | SUI1 |
| smart00654 | 2 | 1 | 0 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 3 | 1 | 2 | 2 | 1 | 2 | 2 | 2 | 1 | 1 | 6 | 1 | 2 | 2 | 2 | 2 | 2 | 1 | eIF6 |
| 0008152 (metabolism): #4 |
| smart00658 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | RPOL8c |
| pfam00923 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 2 | 1 | 3 | 2 | 1 | 0 | 1 | 3 | 2 | 2 | 2 | 3 | 1 | 1 | 2 | 1 | 3 | 1 | 2 | 1 | 2 | Transaldolase |
| pfam02630 | 1 | 0 | 0 | 1 | 0 | 1 | 3 | 5 | 3 | 1 | 2 | 2 | 0 | 1 | 2 | 1 | 2 | 2 | 3 | 2 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | SCO1-SenC |
| pfam03870 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | RNA_pol_Rpb8 |
| 0005515 (protein binding): #3 |
| pfam03367 | 2 | 0 | 0 | 2 | 3 | 2 | 4 | 4 | 2 | 1 | 4 | 0 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 4 | 4 | 2 | 2 | 2 | 2 | 2 | 8 | zf-ZPR1 |
| pfam03256 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 3 | 2 | 6 | 3 | 4 | APC10 |
| smart00709 | 2 | 0 | 0 | 2 | 3 | 2 | 4 | 4 | 2 | 1 | 4 | 0 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 4 | 4 | 2 | 2 | 2 | 2 | 2 | 8 | Zpr1 |
| 0005623 (cell): #3 |
| pfam01040 | 2 | 0 | 0 | 2 | 1 | 1 | 3 | 2 | 2 | 3 | 4 | 7 | 0 | 2 | 4 | 2 | 2 | 2 | 5 | 3 | 3 | 3 | 2 | 2 | 2 | 6 | 4 | 2 | UbiA |
| pfam03248 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 2 | 1 | 1 | 4 | 2 | 1 | 1 | 1 | 1 | 1 | 7 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | Rer1 |
| pfam05832 | 2 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | DUF846 |
| 0004222 (metalloendopeptidase activity): #3 |
| pfam01432 | 1 | 0 | 0 | 2 | 0 | 3 | 3 | 3 | 5 | 2 | 4 | 3 | 0 | 1 | 0 | 2 | 2 | 2 | 2 | 2 | 3 | 1 | 3 | 2 | 7 | 6 | 5 | 3 | Peptidase_M3 |
| pfam00814 | 2 | 0 | 0 | 2 | 1 | 2 | 2 | 1 | 1 | 0 | 2 | 2 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 5 | 2 | 3 | 2 | 2 | 3 | 2 | 2 | Peptidase_M22 |
| pfam01435 | 4 | 0 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 7 | 2 | 2 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 2 | 4 | 2 | 4 | 3 | 7 | 3 | Peptidase_M48 |
| 0003700 (transcription factor activity): #3 |
| pfam04056 | 1 | 0 | 0 | 1 | 1 | 3 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 4 | 3 | 4 | 2 | Ssl1 |
| pfam03849 | 3 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 2 | 2 | 1 | 2 | 1 | 2 | 2 | Tfb2 |
| pfam04658 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 4 | 1 | 1 | 1 | 1 | 2 | 4 | 2 | 4 | TAFII55_N |
| 0004379 (glycylpeptide N-tetradecanoyltransferase activity): #2 |
| pfam01233 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 3 | 1 | 2 | 1 | 3 | 4 | 3 | 3 | NMT |
| pfam02799 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 4 | 1 | 2 | 1 | 3 | 4 | 3 | 3 | NMT_C |
| 0006886 (intracellular protein transport): #2 |
| pfam04840 | 1 | 0 | 0 | 2 | 2 | 2 | 2 | 4 | 1 | 1 | 2 | 1 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 0 | 3 | 1 | 2 | 2 | 3 | 2 | 1 | 2 | Vps16_C |
| pfam04841 | 1 | 0 | 0 | 2 | 1 | 2 | 1 | 3 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | Vps16_N |
| 0030528 (transcription regulator activity): #2 |
| pfam01722 | 4 | 0 | 0 | 1 | 1 | 2 | 3 | 0 | 2 | 5 | 3 | 4 | 0 | 2 | 1 | 2 | 2 | 3 | 3 | 2 | 1 | 1 | 2 | 1 | 1 | 2 | 2 | 4 | BolA |
| pfam03153 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 4 | 1 | 7 | 2 | 2 | 4 | 5 | 4 | TFIIA |
| 0006281 (DNA repair): #2 |
| pfam03215 | 2 | 0 | 0 | 2 | 1 | 1 | 4 | 1 | 4 | 2 | 3 | 5 | 0 | 2 | 1 | 2 | 1 | 3 | 2 | 1 | 2 | 2 | 1 | 3 | 4 | 7 | 5 | 4 | Rad17 |
| pfam00730 | 3 | 0 | 0 | 3 | 3 | 3 | 4 | 5 | 3 | 2 | 10 | 8 | 2 | 4 | 5 | 5 | 4 | 4 | 1 | 1 | 3 | 2 | 2 | 4 | 4 | 4 | 5 | 3 | HhH-GPD |
| 0006355 (regulation of transcription, DNA-dependent): #1 |
| pfam03366 | 2 | 0 | 0 | 1 | 1 | 1 | 3 | 3 | 1 | 1 | 2 | 1 | 1 | 2 | 2 | 2 | 3 | 3 | 2 | 2 | 3 | 2 | 7 | 3 | 8 | 5 | 5 | 3 | YEATS |
| 0004671 (protein-S-isoprenylcysteine O-methyltransferase activity): #1 |
| pfam04140 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | ICMT |
| 0006298 (mismatch repair): #1 |
| pfam01119 | 2 | 0 | 0 | 2 | 1 | 1 | 3 | 3 | 2 | 1 | 2 | 2 | 2 | 2 | 3 | 3 | 3 | 3 | 2 | 5 | 1 | 2 | 4 | 2 | 6 | 5 | 5 | 2 | DNA_mis_repair |
| 0008219 (cell death): #1 |
| pfam04194 | 2 | 0 | 0 | 1 | 2 | 1 | 3 | 4 | 2 | 1 | 2 | 3 | 0 | 2 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 3 | 2 | 3 | 2 | 2 | 2 | PDCD2_C |
| 0051205 (protein insertion into membrane): #1 |
| pfam02096 | 2 | 0 | 0 | 1 | 0 | 0 | 2 | 3 | 1 | 3 | 5 | 5 | 0 | 3 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | 1 | 2 | 1 | 2 | 2 | 1 | 60KD_IMP |
| 0015450 (protein translocase activity): #1 |
| pfam00344 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 6 | 3 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | SecY |
| 0006397 (mRNA processing): #1 |
| pfam04037 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 3 | 1 | 1 | DUF382 |
| 0008654 (phospholipid biosynthesis): #1 |
| pfam01066 | 5 | 0 | 0 | 2 | 2 | 3 | 2 | 2 | 2 | 3 | 6 | 3 | 0 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 5 | 6 | 7 | 5 | 5 | 8 | 10 | 6 | CDP-OH_P_transf |
| 0008375 (acetylglucosaminyltransferase activity): #1 |
| pfam06432 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 2 | 0 | 1 | 2 | 1 | 1 | 1 | 3 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | GPI2 |
| 0043176 (amine binding): #1 |
| pfam00185 | 1 | 0 | 0 | 1 | 0 | 1 | 2 | 4 | 1 | 2 | 2 | 1 | 0 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 4 | 1 | 1 | 1 | 8 | 2 | 2 | 2 | OTCace |
| 0008649 (rRNA methyltransferase activity): #1 |
| pfam00398 | 2 | 0 | 0 | 3 | 0 | 2 | 2 | 6 | 2 | 2 | 4 | 2 | 1 | 3 | 1 | 1 | 2 | 3 | 4 | 5 | 1 | 2 | 6 | 2 | 3 | 3 | 3 | 3 | RrnaAD |
| 0004719 (protein-L-isoaspartate (D-aspartate) O-methyltransferase activity): #1 |
| pfam01135 | 1 | 0 | 0 | 1 | 2 | 2 | 2 | 3 | 2 | 3 | 2 | 1 | 0 | 1 | 3 | 1 | 0 | 0 | 1 | 1 | 3 | 1 | 2 | 2 | 3 | 5 | 5 | 4 | PCMT |
| 0042254 (ribosome biogenesis and assembly): #1 |
| pfam03587 | 2 | 0 | 0 | 2 | 1 | 2 | 4 | 3 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | Mra1 |
| 0008121 (ubiquinol-cytochrome-c reductase activity): #1 |
| pfam02271 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 4 | UCR_14kD |
| 0006370 (mRNA capping): #1 |
| pfam03291 | 2 | 0 | 0 | 1 | 1 | 1 | 4 | 6 | 3 | 0 | 2 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 3 | 6 | 3 | Pox_MCEL |
| 0004798 (thymidylate kinase activity): #1 |
| pfam02223 | 1 | 0 | 0 | 1 | 1 | 2 | 4 | 4 | 3 | 2 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 3 | 1 | 1 | 6 | 2 | Thymidylate_kin |
| 0004871 (signal transducer activity): #1 |
| pfam00810 | 1 | 0 | 0 | 2 | 3 | 3 | 1 | 1 | 1 | 3 | 7 | 2 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 1 | 0 | 4 | 1 | 3 | 4 | 5 | 3 | 3 | ER_lumen_recept |
| 0004197 (cysteine-type endopeptidase activity): #1 |
| pfam01650 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 5 | 7 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 1 | 2 | 3 | 1 | 5 | 3 | 3 | Peptidase_C13 |
| 0008612 (hypusine biosynthesis from peptidyl-lysine): #1 |
| pfam01916 | 1 | 0 | 1 | 2 | 1 | 1 | 3 | 3 | 3 | 2 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 5 | 1 | 2 | 1 | DS |
| 0006364 (rRNA processing): #1 |
| pfam05997 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 3 | 2 | 2 | Nop52 |
| 0008262 (importin-alpha export receptor activity): #1 |
| pfam03378 | 2 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | CAS_CSE1 |
| 0019211 (phosphatase activator activity): #1 |
| pfam03095 | 2 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 0 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 3 | 1 | 4 | 1 | 2 | 3 | 1 | 1 | PTPA |
| 0004003 (ATP-dependent DNA helicase activity): #1 |
| pfam06777 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 3 | 2 | 1 | 2 | DUF1227 |
| 0003963 (RNA-3'-phosphate cyclase activity): #1 |
| pfam01137 | 3 | 0 | 0 | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 4 | 4 | 2 | 2 | RTC |
| 0006888 (ER to Golgi transport): #1 |
| pfam04099 | 2 | 0 | 0 | 2 | 0 | 2 | 2 | 2 | 2 | 2 | 2 | 4 | 1 | 2 | 1 | 1 | 2 | 3 | 4 | 2 | 4 | 3 | 3 | 3 | 4 | 5 | 5 | 6 | Sybindin |
| 0030163 (protein catabolism): #1 |
| pfam03152 | 1 | 1 | 0 | 2 | 1 | 2 | 1 | 0 | 1 | 1 | 4 | 4 | 1 | 0 | 2 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | UFD1 |
| 0007067 (mitosis): #1 |
| pfam02966 | 1 | 0 | 0 | 1 | 0 | 1 | 2 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 2 | 2 | DIM1 |
| No mapping to Gene-ontology |
| Species | Dd | Gt | Cm | Pf | Ch | Tg | Tb | Tc | Lm | Cr | At | Os | Ec | Sp | An | Nc | Sc | Cg | Ce | Cb | Am | Ag | Dm | Ci | Fr | Hs | Mm | Rn | |
| pfam01592 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 3 | 2 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 3 | 1 | 1 | NifU_N |
| smart00581 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 2 | 1 | 1 | 0 | 0 | 1 | 1 | 3 | 2 | 2 | 1 | 2 | 2 | 3 | 4 | 3 | 2 | PSP |
| smart00567 | 4 | 0 | 0 | 2 | 1 | 2 | 2 | 4 | 2 | 0 | 4 | 0 | 1 | 3 | 1 | 2 | 2 | 1 | 3 | 4 | 2 | 3 | 2 | 0 | 1 | 2 | 3 | 2 | EZ_HEAT |
| pfam03635 | 2 | 0 | 0 | 2 | 2 | 2 | 1 | 1 | 4 | 2 | 2 | 1 | 0 | 1 | 3 | 2 | 1 | 1 | 1 | 1 | 4 | 1 | 3 | 1 | 3 | 1 | 1 | 1 | Vps35 |
| pfam03399 | 2 | 0 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 1 | 2 | 4 | 1 | 3 | 2 | 2 | 2 | 2 | 4 | 2 | 4 | 4 | 5 | 3 | 6 | 4 | 4 | 2 | SAC3_GANP |
| pfam01026 | 5 | 0 | 0 | 2 | 1 | 2 | 3 | 5 | 2 | 3 | 3 | 3 | 1 | 2 | 3 | 3 | 2 | 2 | 4 | 2 | 3 | 3 | 4 | 3 | 2 | 4 | 4 | 3 | TatD_DNase |
| pfam05179 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 6 | 2 | 3 | 2 | 3 | 3 | 1 | 1 | CDC73 |
| pfam04511 | 2 | 1 | 0 | 4 | 2 | 3 | 2 | 3 | 2 | 2 | 3 | 2 | 1 | 2 | 1 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 4 | 3 | 6 | DER1 |
| pfam01171 | 3 | 0 | 0 | 2 | 1 | 3 | 1 | 2 | 1 | 2 | 3 | 3 | 1 | 2 | 2 | 3 | 1 | 1 | 2 | 2 | 6 | 4 | 3 | 3 | 2 | 0 | 1 | 5 | ATP_bind_3 |
| pfam02582 | 2 | 0 | 0 | 2 | 2 | 1 | 1 | 3 | 1 | 3 | 2 | 1 | 1 | 2 | 4 | 3 | 3 | 3 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | DUF155 |
| smart00279 | 1 | 0 | 0 | 3 | 2 | 2 | 3 | 1 | 2 | 1 | 3 | 5 | 1 | 3 | 2 | 1 | 4 | 1 | 2 | 2 | 1 | 3 | 3 | 2 | 4 | 4 | 5 | 2 | HhH2 |
| pfam03969 | 1 | 0 | 0 | 1 | 0 | 2 | 3 | 3 | 2 | 4 | 3 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 3 | 1 | 1 | 0 | AFG1_ATPase |
| pfam05127 | 1 | 2 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 3 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | DUF699 |
| pfam04243 | 1 | 0 | 0 | 1 | 2 | 2 | 2 | 2 | 1 | 3 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 3 | 3 | 1 | 2 | 2 | 3 | 2 | 4 | 4 | 3 | tRNA_m1G_MT_9 |
| pfam05057 | 2 | 0 | 0 | 1 | 2 | 2 | 5 | 4 | 1 | 4 | 7 | 5 | 0 | 1 | 2 | 4 | 4 | 4 | 3 | 0 | 3 | 1 | 1 | 1 | 2 | 2 | 5 | 3 | DUF676 |
| pfam02301 | 2 | 0 | 0 | 2 | 1 | 0 | 3 | 4 | 2 | 3 | 4 | 3 | 0 | 2 | 3 | 3 | 3 | 3 | 6 | 3 | 1 | 2 | 2 | 3 | 3 | 6 | 4 | 5 | HORMA |
| pfam04072 | 1 | 0 | 0 | 1 | 0 | 1 | 2 | 3 | 2 | 2 | 1 | 1 | 0 | 2 | 2 | 4 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 3 | 4 | 2 | LCM |
| pfam02475 | 1 | 0 | 0 | 2 | 1 | 3 | 3 | 4 | 3 | 1 | 3 | 2 | 1 | 2 | 2 | 1 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | 3 | 2 | 3 | 2 | Met_10 |
| pfam05833 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | FbpA |
| pfam01300 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 3 | 3 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 0 | 1 | 1 | 3 | 3 | 1 | 1 | Sua5_yciO_yrdC |
| pfam05909 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 3 | 1 | 1 | 1 | 2 | 1 | 1 | IWS1_C |
| pfam04078 | 2 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 4 | 3 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 3 | 1 | 1 | 2 | 1 | 1 | Rcd1 |
| pfam04129 | 3 | 0 | 0 | 1 | 0 | 2 | 3 | 2 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 0 | 1 | 2 | 1 | 5 | 3 | 4 | 1 | Vps52 |
| pfam04900 | 2 | 1 | 0 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 3 | 2 | 1 | 2 | 1 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 4 | 3 | 2 | DUF652 |
| pfam02629 | 2 | 0 | 0 | 2 | 0 | 2 | 2 | 1 | 0 | 1 | 2 | 1 | 0 | 1 | 2 | 4 | 1 | 1 | 4 | 4 | 2 | 2 | 3 | 2 | 4 | 2 | 2 | 2 | CoA_binding |
| pfam04981 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 4 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 2 | 3 | 2 | NMD3 |
| pfam05047 | 2 | 0 | 0 | 1 | 0 | 1 | 2 | 1 | 1 | 2 | 2 | 2 | 0 | 1 | 2 | 2 | 1 | 1 | 3 | 3 | 1 | 5 | 3 | 3 | 3 | 4 | 4 | 4 | L51_S25_CI-B8 |
| pfam03371 | 2 | 0 | 0 | 2 | 1 | 2 | 1 | 2 | 0 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 3 | 3 | 3 | 2 | 2 | 2 | 3 | 2 | PRP38 |
| pfam04950 | 2 | 0 | 2 | 3 | 2 | 3 | 3 | 3 | 2 | 2 | 2 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 4 | 4 | 4 | 2 | 3 | 4 | 9 | 2 | 5 | 3 | DUF663 |
| pfam04188 | 2 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 0 | 1 | 2 | 0 | 3 | 1 | 1 | 2 | 0 | 1 | 1 | 2 | 2 | 2 | 2 | 3 | 2 | DUF409 |
| pfam05907 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 2 | 2 | DUF866 |
| pfam02142 | 2 | 0 | 0 | 1 | 0 | 1 | 2 | 2 | 1 | 1 | 2 | 1 | 0 | 3 | 3 | 3 | 4 | 3 | 2 | 2 | 5 | 2 | 3 | 2 | 6 | 2 | 2 | 2 | MGS |
| pfam06862 | 1 | 0 | 0 | 2 | 1 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 3 | 1 | 3 | 1 | DUF1253 |
| pfam01866 | 1 | 1 | 0 | 4 | 1 | 3 | 4 | 2 | 3 | 0 | 2 | 1 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 3 | 4 | 6 | 5 | 3 | Diphthamide_syn |
| pfam05891 | 2 | 0 | 0 | 0 | 1 | 1 | 4 | 2 | 1 | 1 | 2 | 4 | 0 | 1 | 0 | 2 | 1 | 1 | 4 | 3 | 4 | 1 | 1 | 1 | 5 | 2 | 1 | 2 | DUF858 |
| pfam04874 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | Mak16 |
| pfam06732 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 3 | 1 | 1 | 2 | Pescadillo_N |
| smart00594 | 4 | 0 | 0 | 2 | 1 | 2 | 1 | 2 | 2 | 2 | 5 | 2 | 0 | 2 | 2 | 2 | 2 | 2 | 3 | 1 | 4 | 3 | 4 | 3 | 5 | 6 | 5 | 2 | UAS |
| pfam01871 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 1 | 1 | 2 | 3 | 2 | 2 | AMMECR1 |
| pfam06957 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 2 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 4 | 1 | 4 | 2 | 2 | 2 | COPI_C |
| pfam01902 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 2 | 2 | 2 | ATP_bind_4 |
| pfam03909 | 2 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 7 | 4 | 0 | 2 | 2 | 3 | 2 | 1 | 2 | 2 | 0 | 5 | 2 | 3 | 4 | 5 | 4 | 4 | BSD |
| pfam05148 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | Methyltransf_8 |
| smart00751 | 3 | 0 | 0 | 2 | 3 | 2 | 1 | 2 | 1 | 2 | 8 | 5 | 0 | 2 | 2 | 3 | 2 | 1 | 2 | 2 | 0 | 6 | 3 | 4 | 4 | 5 | 4 | 4 | BSD |
| pfam06927 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 5 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 3 | 2 | SAP_155 |
| pfam05863 | 1 | 0 | 0 | 1 | 2 | 1 | 1 | 2 | 2 | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | DUF850 |
| pfam03463 | 2 | 1 | 0 | 2 | 2 | 2 | 4 | 2 | 2 | 2 | 5 | 4 | 2 | 2 | 2 | 2 | 1 | 3 | 3 | 2 | 1 | 2 | 3 | 2 | 1 | 2 | 2 | 2 | eRF1_1 |
| pfam02824 | 3 | 0 | 0 | 1 | 3 | 2 | 3 | 3 | 3 | 3 | 7 | 3 | 2 | 3 | 3 | 3 | 3 | 3 | 4 | 2 | 1 | 4 | 6 | 3 | 5 | 6 | 8 | 6 | TGS |
| pfam06417 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 7 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | DUF1077 |
| pfam06201 | 1 | 0 | 0 | 1 | 3 | 3 | 2 | 2 | 1 | 2 | 3 | 2 | 0 | 2 | 2 | 2 | 0 | 1 | 2 | 2 | 1 | 3 | 2 | 2 | 5 | 2 | 3 | 2 | DUF1000 |
| pfam05002 | 1 | 0 | 0 | 2 | 0 | 2 | 1 | 2 | 1 | 1 | 3 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 3 | 2 | 4 | 3 | 2 | 2 | SGS |
| pfam01981 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | UPF0099 |
| pfam04054 | 1 | 0 | 0 | 4 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 3 | 1 | 4 | 3 | 2 | 1 | Not1 |
| pfam04046 | 1 | 0 | 0 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 2 | 1 | 1 | 0 | 0 | 1 | 1 | 3 | 2 | 2 | 1 | 2 | 2 | 3 | 4 | 3 | 2 | PSP |
| pfam04051 | 4 | 0 | 0 | 3 | 2 | 3 | 5 | 4 | 2 | 3 | 3 | 2 | 2 | 3 | 3 | 3 | 4 | 4 | 3 | 2 | 2 | 4 | 3 | 3 | 6 | 6 | 5 | 5 | TRAPP_Bet3 |
| pfam05019 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | Coq4 |
| pfam04427 | 4 | 2 | 0 | 5 | 5 | 7 | 10 | 10 | 6 | 4 | 7 | 4 | 4 | 6 | 5 | 5 | 6 | 6 | 6 | 6 | 4 | 6 | 7 | 5 | 6 | 8 | 8 | 7 | Brix |
| pfam06246 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 3 | 2 | 1 | Isy1 |
| smart00657 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 0 | 3 | 3 | 2 | 2 | 1 | 1 | 3 | 2 | 2 | 1 | 3 | 2 | 4 | 1 | 3 | 2 | 2 | 2 | RPOL4c |
| pfam01103 | 1 | 0 | 0 | 0 | 1 | 0 | 2 | 2 | 1 | 3 | 5 | 5 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 3 | 1 | 1 | 2 | 1 | 1 | 1 | Bac_surface_Ag |
| pfam04127 | 1 | 0 | 0 | 4 | 1 | 1 | 2 | 1 | 2 | 2 | 2 | 1 | 0 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | DFP |
| pfam04158 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | Sof1 |
| pfam03986 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 0 | 2 | 1 | 1 | Autophagy_N |
| pfam00456 | 1 | 0 | 0 | 1 | 0 | 1 | 2 | 2 | 1 | 1 | 3 | 2 | 1 | 1 | 4 | 1 | 2 | 1 | 1 | 1 | 2 | 3 | 4 | 1 | 4 | 5 | 4 | 5 | Transketolase_N |
| pfam03167 | 2 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | 4 | 0 | 2 | 6 | 3 | 4 | 5 | 3 | UDG |
| pfam04502 | 2 | 0 | 0 | 2 | 1 | 2 | 2 | 2 | 1 | 2 | 6 | 3 | 1 | 2 | 2 | 2 | 2 | 1 | 2 | 3 | 3 | 2 | 2 | 2 | 2 | 5 | 4 | 4 | DUF572 |
| pfam04100 | 2 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 5 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 2 | 2 | 1 | 3 | 2 | 2 | Vps53_N |
| pfam02390 | 2 | 0 | 0 | 2 | 1 | 1 | 4 | 4 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 2 | 0 | Methyltransf_4 |
| pfam03435 | 4 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 1 | 1 | 3 | 1 | 1 | 2 | 2 | 3 | 1 | 1 | 4 | 2 | 2 | 3 | 3 | 2 | 4 | 2 | 2 | 2 | Saccharop_dh |
| pfam02441 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 2 | 2 | 0 | 1 | 2 | 2 | 5 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | Flavoprotein |
| pfam01230 | 3 | 0 | 0 | 1 | 1 | 2 | 6 | 2 | 2 | 1 | 3 | 3 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 2 | 1 | 8 | 4 | 5 | 5 | 5 | 4 | 5 | HIT |
| pfam06984 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 3 | 1 | 1 | MRP-L47 |
| pfam05021 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 4 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 5 | 1 | 3 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | NPL4 |
| pfam03464 | 2 | 1 | 0 | 1 | 1 | 2 | 4 | 2 | 1 | 2 | 5 | 4 | 1 | 2 | 2 | 2 | 2 | 3 | 3 | 2 | 0 | 2 | 3 | 2 | 1 | 2 | 2 | 2 | eRF1_2 |
| pfam02222 | 3 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 1 | 2 | 2 | 3 | 0 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 3 | 3 | 2 | 4 | 3 | 3 | 2 | ATP-grasp |
| pfam04006 | 2 | 0 | 1 | 0 | 1 | 0 | 4 | 4 | 1 | 1 | 2 | 0 | 1 | 3 | 1 | 1 | 2 | 1 | 3 | 3 | 2 | 2 | 1 | 2 | 3 | 2 | 4 | 4 | Mpp10 |
| pfam04729 | 1 | 0 | 0 | 1 | 1 | 2 | 3 | 4 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | 1 | 1 | 2 | 2 | 4 | 3 | 2 | Anti-silence |
| pfam03914 | 4 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 2 | 3 | 3 | 1 | 2 | 2 | 2 | 3 | 5 | 2 | 1 | 2 | 4 | 5 | 3 | 2 | 7 | 4 | 5 | CBF |
| pfam02545 | 2 | 0 | 1 | 2 | 1 | 2 | 2 | 3 | 1 | 2 | 3 | 2 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | Maf |
| pfam05093 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 1 | 2 | DUF689 |
| pfam04128 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | Psf2 |
| pfam03690 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 3 | 1 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 3 | 1 | 1 | 2 | 1 | 3 | UPF0160 |
| pfam05670 | 2 | 0 | 1 | 2 | 1 | 2 | 3 | 4 | 1 | 2 | 2 | 2 | 1 | 1 | 1 | 2 | 2 | 2 | 3 | 2 | 3 | 2 | 3 | 2 | 3 | 4 | 2 | 3 | DUF814 |
| pfam04068 | 2 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 0 | 2 | 1 | 0 | 2 | 2 | 2 | 1 | 2 | 3 | 2 | 1 | 2 | 1 | 1 | 1 | RLI |
| pfam05291 | 1 | 0 | 0 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 | Bystin |
| pfam04034 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 2 | 2 | DUF367 |
| pfam03987 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 3 | 0 | 4 | 2 | 2 | Autophagy_C |
| pfam05958 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 4 | 3 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 3 | 1 | 2 | 1 | 4 | 4 | 3 | 2 | tRNA_U5-meth_tr |
| pfam04825 | 1 | 0 | 0 | 0 | 1 | 0 | 2 | 2 | 1 | 2 | 4 | 2 | 0 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 2 | 1 | 2 | 2 | 3 | 3 | 3 | Rad21_Rec8_N |
| pfam04137 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | 1 | 1 | 5 | 2 | 2 | 2 | ERO1 |
| pfam03465 | 2 | 1 | 0 | 2 | 2 | 1 | 4 | 2 | 1 | 1 | 5 | 4 | 2 | 2 | 2 | 1 | 3 | 3 | 3 | 2 | 0 | 2 | 3 | 2 | 1 | 2 | 2 | 2 | eRF1_3 |
| pfam01798 | 3 | 2 | 0 | 2 | 3 | 2 | 6 | 5 | 3 | 3 | 6 | 8 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 4 | 7 | 3 | 5 | 3 | 5 | 4 | 5 | 4 | Nop |